locus-tag	class	description
Acaty_1p0018	COG3039	Transposase
Acaty_1p0020	COG0109	protoheme IX farnesyltransferase activity
Acaty_1p0024	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Acaty_1p0025	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Acaty_1p0028	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Acaty_1p0033	COG1192	Involved in chromosome partitioning
Acaty_2p0009	COG4974	Belongs to the 'phage' integrase family
Acaty_c0001	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
Acaty_c0002	COG0592	DNA-directed DNA polymerase activity
Acaty_c0003	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
Acaty_c0004	COG0187	DNA topoisomerase II activity
Acaty_c0005	COG0543	2 iron, 2 sulfur cluster binding
Acaty_c0005	COG0493	'glutamate synthase
Acaty_c0006	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
Acaty_c0008	COG0850	regulation of cytokinetic process
Acaty_c0009	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
Acaty_c0010	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Acaty_c0010	COG1754	DNA topoisomerase type I activity
Acaty_c0011	COG2922	Belongs to the Smg family
Acaty_c0012	COG0758	DNA mediated transformation
Acaty_c0014	COG0242	peptide deformylase activity
Acaty_c0015	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Acaty_c0016	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Acaty_c0016	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Acaty_c0017	COG5000	phosphorelay sensor kinase activity
Acaty_c0018	COG2204	response regulator
Acaty_c0019	COG0521	Mo-molybdopterin cofactor biosynthetic process
Acaty_c0021	COG0445	tRNA wobble uridine modification
Acaty_c0022	COG0357	Ribosomal RNA small subunit methyltransferase G
Acaty_c0023	COG1192	Involved in chromosome partitioning
Acaty_c0024	COG1475	DNA binding
Acaty_c0026	COG0356	it plays a direct role in the translocation of protons across the membrane
Acaty_c0028	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Acaty_c0029	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Acaty_c0030	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
Acaty_c0031	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
Acaty_c0034	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
Acaty_c0048	COG0745	RESPONSE REGULATOR receiver
Acaty_c0048	COG3706	GGDEF domain
Acaty_c0051	COG0210	DNA helicase
Acaty_c0054	COG0745	RESPONSE REGULATOR receiver
Acaty_c0057	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Acaty_c0060	COG1970	mechanosensitive ion channel activity
Acaty_c0061	COG1322	Protein conserved in bacteria
Acaty_c0062	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
Acaty_c0064	COG0483	inositol monophosphate 1-phosphatase activity
Acaty_c0065	COG1494	fructose-1,6-bisphosphatase
Acaty_c0066	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Acaty_c0067	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Acaty_c0068	COG0126	phosphoglycerate kinase activity
Acaty_c0069	COG0469	pyruvate kinase activity
Acaty_c0072	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Acaty_c0073	COG0546	phosphoglycolate phosphatase activity
Acaty_c0075	COG0512	Glutamine amidotransferase of anthranilate synthase
Acaty_c0076	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Acaty_c0077	COG0134	indole-3-glycerol-phosphate synthase activity
Acaty_c0080	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
Acaty_c0082	COG2945	thiolester hydrolase activity
Acaty_c0083	COG1131	(ABC) transporter
Acaty_c0091	COG1569	PIN domain
Acaty_c0092	COG3311	Transcriptional regulator
Acaty_c0107	COG1475	DNA binding
Acaty_c0148	COG3772	lysozyme
Acaty_c0155	COG1484	DNA-dependent DNA replication
Acaty_c0159	COG4942	peptidase
Acaty_c0165	COG3668	Plasmid stabilization system
Acaty_c0167	COG1475	DNA binding
Acaty_c0168	COG1192	Involved in chromosome partitioning
Acaty_c0194	COG0463	Glycosyl transferase, family 2
Acaty_c0200	COG3039	Transposase
Acaty_c0201	COG3547	Transposase (IS116 IS110 IS902 family)
Acaty_c0204	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Acaty_c0206	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
Acaty_c0209	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
Acaty_c0214	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Acaty_c0215	COG1937	Protein conserved in bacteria
Acaty_c0218	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Acaty_c0221	COG2433	Pfam Transposase IS66
Acaty_c0222	COG3436	PFAM IS66 Orf2 family protein
Acaty_c0227	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Acaty_c0228	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Acaty_c0238	COG0438	transferase activity, transferring glycosyl groups
Acaty_c0252	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Acaty_c0253	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Acaty_c0254	COG1461	Dihydroxyacetone kinase
Acaty_c0255	COG2376	Dihydroxyacetone kinase
Acaty_c0262	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Acaty_c0264	COG0305	Participates in initiation and elongation during chromosome replication
Acaty_c0265	COG0359	binds to the 23S rRNA
Acaty_c0267	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
Acaty_c0268	COG0360	Binds together with S18 to 16S ribosomal RNA
Acaty_c0269	COG1472	Belongs to the glycosyl hydrolase 3 family
Acaty_c0270	COG0531	amino acid
Acaty_c0272	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Acaty_c0277	COG0363	glucosamine-6-phosphate deaminase activity
Acaty_c0280	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Acaty_c0281	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Acaty_c0283	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Acaty_c0284	COG1074	ATP-dependent DNA helicase activity
Acaty_c0285	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
Acaty_c0287	COG3220	belongs to the UPF0276 family
Acaty_c0290	COG2204	response regulator
Acaty_c0292	COG2205	protein histidine kinase activity
Acaty_c0293	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Acaty_c0294	COG0540	Belongs to the ATCase OTCase family
Acaty_c0295	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
Acaty_c0297	COG1678	Uncharacterized ACR, COG1678
Acaty_c0298	COG0189	ligase activity
Acaty_c0301	COG0316	Belongs to the HesB IscA family
Acaty_c0305	COG3431	PFAM Phosphate-starvation-inducible E
Acaty_c0307	COG0022	dehydrogenase e1 component
Acaty_c0307	COG0508	dehydrogenase complex catalyzes the overall conversion of
Acaty_c0308	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Acaty_c0310	COG0471	metal ion transport
Acaty_c0310	COG3273	potassium ion transport
Acaty_c0311	COG0745	RESPONSE REGULATOR receiver
Acaty_c0312	COG2205	protein histidine kinase activity
Acaty_c0314	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Acaty_c0315	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
Acaty_c0316	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
Acaty_c0318	COG0415	Belongs to the DNA photolyase family
Acaty_c0320	COG2814	Major facilitator Superfamily
Acaty_c0324	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Acaty_c0326	COG2226	methyltransferase
Acaty_c0327	COG2967	ApaG domain
Acaty_c0328	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Acaty_c0332	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Acaty_c0333	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Acaty_c0336	COG0436	Aminotransferase
Acaty_c0338	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Acaty_c0340	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Acaty_c0341	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
Acaty_c0342	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Acaty_c0343	COG4591	ABC-type transport system involved in lipoprotein release permease component
Acaty_c0344	COG1136	(ABC) transporter
Acaty_c0346	COG2333	competence protein COMEC
Acaty_c0346	COG0658	competence protein
Acaty_c0348	COG0848	biopolymer transport protein
Acaty_c0351	COG1663	tetraacyldisaccharide 4'-kinase activity
Acaty_c0352	COG2835	tetraacyldisaccharide 4'-kinase activity
Acaty_c0353	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
Acaty_c0360	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
Acaty_c0361	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Acaty_c0362	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Acaty_c0364	COG0330	HflC and HflK could
Acaty_c0366	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
Acaty_c0368	COG2814	Major facilitator Superfamily
Acaty_c0373	COG0805	protein transport
Acaty_c0374	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Acaty_c0375	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Acaty_c0376	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Acaty_c0376	COG0140	phosphoribosyl-ATP diphosphatase activity
Acaty_c0377	COG0107	imidazoleglycerol-phosphate synthase activity
Acaty_c0378	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
Acaty_c0379	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Acaty_c0380	COG0131	Imidazoleglycerol-phosphate dehydratase
Acaty_c0381	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Acaty_c0383	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Acaty_c0384	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Acaty_c0385	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Acaty_c0387	COG0842	Transport permease protein
Acaty_c0388	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Acaty_c0391	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Acaty_c0395	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Acaty_c0397	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
Acaty_c0401	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Acaty_c0401	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Acaty_c0401	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
Acaty_c0402	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
Acaty_c0403	COG1660	Displays ATPase and GTPase activities
Acaty_c0406	COG1376	ErfK ybiS ycfS ynhG family protein
Acaty_c0408	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Acaty_c0411	COG0297	glycogen (starch) synthase activity
Acaty_c0418	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
Acaty_c0419	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Acaty_c0421	COG2204	response regulator
Acaty_c0425	COG0497	DNA recombination
Acaty_c0426	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Acaty_c0427	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
Acaty_c0428	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Acaty_c0431	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
Acaty_c0436	COG0114	fumarate hydratase activity
Acaty_c0437	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
Acaty_c0439	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Acaty_c0439	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Acaty_c0440	COG0006	proline dipeptidase activity
Acaty_c0444	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
Acaty_c0447	COG0495	leucyl-tRNA aminoacylation
Acaty_c0448	COG1534	Rna-binding protein
Acaty_c0449	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
Acaty_c0454	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
Acaty_c0456	COG1061	Type III restriction enzyme res subunit
Acaty_c0459	COG1002	Type II restriction enzyme, methylase subunits
Acaty_c0460	COG1002	Type II restriction enzyme, methylase subunits
Acaty_c0468	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
Acaty_c0469	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Acaty_c0470	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Acaty_c0472	COG1294	oxidase, subunit
Acaty_c0475	COG0166	Belongs to the GPI family
Acaty_c0476	COG1686	Belongs to the peptidase S11 family
Acaty_c0482	COG0642	Histidine kinase
Acaty_c0483	COG0745	RESPONSE REGULATOR receiver
Acaty_c0485	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Acaty_c0487	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
Acaty_c0491	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
Acaty_c0492	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Acaty_c0493	COG2890	protein-(glutamine-N5) methyltransferase activity
Acaty_c0494	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Acaty_c0495	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
Acaty_c0496	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Acaty_c0498	COG0116	Belongs to the methyltransferase superfamily
Acaty_c0498	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
Acaty_c0499	COG0552	protein localization to endoplasmic reticulum
Acaty_c0500	COG2884	Cell division ATP-binding protein ftsE
Acaty_c0501	COG2177	Part of the ABC transporter FtsEX involved in
Acaty_c0504	COG3264	Mechanosensitive ion channel
Acaty_c0504	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
Acaty_c0505	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
Acaty_c0507	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
Acaty_c0509	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Acaty_c0511	COG4221	oxidoreductase activity
Acaty_c0516	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
Acaty_c0519	COG1215	transferase activity, transferring glycosyl groups
Acaty_c0523	COG0513	Belongs to the DEAD box helicase family
Acaty_c0524	COG1278	Cold shock
Acaty_c0527	COG0463	Glycosyl transferase, family 2
Acaty_c0535	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Acaty_c0538	COG1230	cation diffusion facilitator family transporter
Acaty_c0539	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Acaty_c0540	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Acaty_c0542	COG1449	Belongs to the glycosyl hydrolase 57 family
Acaty_c0543	COG1940	carbohydrate kinase activity
Acaty_c0546	COG2733	membrane
Acaty_c0548	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Acaty_c0549	COG1702	phosphate starvation-inducible protein PhoH
Acaty_c0550	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
Acaty_c0551	COG4535	Mg2 and Co2 transporter CorC
Acaty_c0552	COG0815	Transfers the fatty acyl group on membrane lipoproteins
Acaty_c0562	COG2433	Pfam Transposase IS66
Acaty_c0563	COG3436	PFAM IS66 Orf2 family protein
Acaty_c0565	COG2433	Pfam Transposase IS66
Acaty_c0571	COG5001	Diguanylate cyclase
Acaty_c0571	COG3300	MHYT domain
Acaty_c0574	COG0033	Phosphoglucomutase
Acaty_c0577	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Acaty_c0578	COG0228	four-way junction DNA binding
Acaty_c0579	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Acaty_c0580	COG0336	Belongs to the RNA methyltransferase TrmD family
Acaty_c0581	COG0335	large ribosomal subunit rRNA binding
Acaty_c0585	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Acaty_c0586	COG3118	belongs to the thioredoxin family
Acaty_c0589	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Acaty_c0590	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Acaty_c0591	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Acaty_c0591	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Acaty_c0594	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
Acaty_c0595	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Acaty_c0598	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Acaty_c0603	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Acaty_c0605	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Acaty_c0607	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Acaty_c0608	COG0081	regulation of translation
Acaty_c0609	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
Acaty_c0610	COG0222	ribosome binding
Acaty_c0611	COG0085	RNA polymerase activity
Acaty_c0612	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Acaty_c0613	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
Acaty_c0614	COG0049	tRNA binding
Acaty_c0615	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Acaty_c0616	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Acaty_c0617	COG0051	transcription antitermination factor activity, RNA binding
Acaty_c0618	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Acaty_c0619	COG0088	Forms part of the polypeptide exit tunnel
Acaty_c0620	COG0089	rRNA binding
Acaty_c0621	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Acaty_c0622	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Acaty_c0623	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
Acaty_c0625	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
Acaty_c0626	COG0255	Belongs to the universal ribosomal protein uL29 family
Acaty_c0627	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
Acaty_c0628	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
Acaty_c0629	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
Acaty_c0630	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
Acaty_c0631	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
Acaty_c0632	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Acaty_c0633	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
Acaty_c0634	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
Acaty_c0635	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
Acaty_c0636	COG1841	ribosomal large subunit assembly
Acaty_c0637	COG0200	Binds to the 23S rRNA
Acaty_c0638	COG0201	protein transport
Acaty_c0639	COG0563	adenylate kinase activity
Acaty_c0640	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
Acaty_c0641	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Acaty_c0642	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
Acaty_c0643	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Acaty_c0645	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Acaty_c0646	COG0202	RNA polymerase activity
Acaty_c0647	COG0203	ribosomal protein L17
Acaty_c0649	COG0629	single-stranded DNA binding
Acaty_c0650	COG0582	viral genome integration into host DNA
Acaty_c0656	COG0210	DNA helicase
Acaty_c0661	COG2433	Pfam Transposase IS66
Acaty_c0662	COG3436	PFAM IS66 Orf2 family protein
Acaty_c0667	COG0312	modulator of DNA gyrase
Acaty_c0668	COG0617	tRNA 3'-terminal CCA addition
Acaty_c0669	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
Acaty_c0671	COG0066	3-isopropylmalate dehydratase activity
Acaty_c0673	COG0259	pyridoxamine-phosphate oxidase activity
Acaty_c0674	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
Acaty_c0677	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Acaty_c0678	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Acaty_c0679	COG1845	cytochrome c oxidase, subunit III
Acaty_c0682	COG0109	protoheme IX farnesyltransferase activity
Acaty_c0683	COG2814	Major facilitator Superfamily
Acaty_c0684	COG1968	undecaprenyl-diphosphatase activity
Acaty_c0685	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Acaty_c0687	COG0505	Belongs to the CarA family
Acaty_c0692	COG0531	amino acid
Acaty_c0693	COG0142	geranyltranstransferase activity
Acaty_c0700	COG1573	uracil-dna glycosylase
Acaty_c0701	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Acaty_c0702	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Acaty_c0704	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
Acaty_c0705	COG0745	RESPONSE REGULATOR receiver
Acaty_c0710	COG0811	peptide transport
Acaty_c0715	COG0768	penicillin binding
Acaty_c0718	COG0167	dihydroorotate dehydrogenase activity
Acaty_c0719	COG0408	coproporphyrinogen oxidase activity
Acaty_c0720	COG0009	L-threonylcarbamoyladenylate synthase
Acaty_c0721	COG0151	Belongs to the GarS family
Acaty_c0722	COG0138	bifunctional purine biosynthesis protein purh
Acaty_c0723	COG1979	alcohol dehydrogenase
Acaty_c0724	COG0012	GTP binding
Acaty_c0725	COG0193	aminoacyl-tRNA hydrolase activity
Acaty_c0726	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
Acaty_c0727	COG0768	penicillin binding
Acaty_c0730	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Acaty_c0731	COG1692	metallophosphoesterase
Acaty_c0734	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Acaty_c0741	COG0589	response to stress
Acaty_c0742	COG0442	prolyl-tRNA aminoacylation
Acaty_c0747	COG1271	oxidase subunit
Acaty_c0749	COG0531	amino acid
Acaty_c0751	COG0525	valine-tRNA ligase activity
Acaty_c0754	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
Acaty_c0762	COG1965	Belongs to the frataxin family
Acaty_c0763	COG0514	ATP-dependent DNA helicase (RecQ)
Acaty_c0765	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
Acaty_c0767	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
Acaty_c0768	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
Acaty_c0769	COG3852	Histidine kinase
Acaty_c0770	COG2204	response regulator
Acaty_c0773	COG3604	Transcriptional regulator
Acaty_c0783	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
Acaty_c0784	COG0268	Binds directly to 16S ribosomal RNA
Acaty_c0787	COG2957	Belongs to the agmatine deiminase family
Acaty_c0788	COG1187	pseudouridine synthase activity
Acaty_c0790	COG0494	nUDIX hydrolase
Acaty_c0796	COG0254	rRNA binding
Acaty_c0797	COG0281	malic enzyme
Acaty_c0799	COG0129	dihydroxy-acid dehydratase activity
Acaty_c0801	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Acaty_c0801	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
Acaty_c0803	COG2350	Protein conserved in bacteria
Acaty_c0804	COG2917	probably involved in intracellular septation
Acaty_c0807	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
Acaty_c0809	COG1959	2 iron, 2 sulfur cluster binding
Acaty_c0810	COG1104	cysteine desulfurase activity
Acaty_c0811	COG0822	iron-sulfur transferase activity
Acaty_c0812	COG0316	Belongs to the HesB IscA family
Acaty_c0813	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
Acaty_c0814	COG0443	Heat shock 70 kDa protein
Acaty_c0817	COG0482	sulfurtransferase activity
Acaty_c0820	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Acaty_c0821	COG0704	Plays a role in the regulation of phosphate uptake
Acaty_c0824	COG0052	Belongs to the universal ribosomal protein uS2 family
Acaty_c0825	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Acaty_c0826	COG0528	UMP kinase activity
Acaty_c0828	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Acaty_c0829	COG0575	Belongs to the CDS family
Acaty_c0830	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
Acaty_c0834	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Acaty_c0835	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Acaty_c0836	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Acaty_c0839	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Acaty_c0840	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Acaty_c0842	COG0825	malonyl-CoA metabolic process
Acaty_c0843	COG0037	tRNA processing
Acaty_c0851	COG1132	(ABC) transporter
Acaty_c0855	COG1592	Rubrerythrin
Acaty_c0858	COG1570	exodeoxyribonuclease VII activity
Acaty_c0859	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Acaty_c0864	COG0741	lytic transglycosylase activity
Acaty_c0866	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Acaty_c0869	COG2223	nitrite transmembrane transporter activity
Acaty_c0870	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Acaty_c0886	COG0616	signal peptide processing
Acaty_c0887	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
Acaty_c0888	COG0314	molybdopterin synthase activity
Acaty_c0889	COG1666	GTP binding
Acaty_c0892	COG0509	glycine decarboxylation via glycine cleavage system
Acaty_c0893	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Acaty_c0895	COG0714	Associated with various cellular activities
Acaty_c0898	COG1132	(ABC) transporter
Acaty_c0899	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
Acaty_c0901	COG0450	alkyl hydroperoxide reductase
Acaty_c0903	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Acaty_c0905	COG0583	DNA-binding transcription factor activity
Acaty_c0908	COG1850	ribulose-bisphosphate carboxylase activity
Acaty_c0909	COG4451	ribulose bisphosphate carboxylase, small
Acaty_c0922	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Acaty_c0931	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Acaty_c0931	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Acaty_c0931	COG0506	proline dehydrogenase activity
Acaty_c0933	COG2205	protein histidine kinase activity
Acaty_c0934	COG0640	Transcriptional regulator
Acaty_c0935	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
Acaty_c0936	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
Acaty_c0946	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Acaty_c0950	COG2814	Major facilitator Superfamily
Acaty_c0951	COG1686	Belongs to the peptidase S11 family
Acaty_c0956	COG0418	dihydroorotase activity
Acaty_c0959	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Acaty_c0964	COG0697	spore germination
Acaty_c0965	COG1902	pentaerythritol trinitrate reductase activity
Acaty_c0974	COG0322	excinuclease ABC activity
Acaty_c0984	COG0557	exoribonuclease II activity
Acaty_c0990	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Acaty_c0991	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
Acaty_c0995	COG1295	ribonuclease BN
Acaty_c0997	COG0333	Belongs to the bacterial ribosomal protein bL32 family
Acaty_c0998	COG0416	fatty acid biosynthetic process
Acaty_c0999	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Acaty_c1000	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
Acaty_c1001	COG1028	Short-chain dehydrogenase reductase Sdr
Acaty_c1002	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Acaty_c1003	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Acaty_c1005	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Acaty_c1006	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
Acaty_c1007	COG0470	DNA polymerase III
Acaty_c1010	COG3002	Belongs to the UPF0753 family
Acaty_c1011	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Acaty_c1012	COG0583	DNA-binding transcription factor activity
Acaty_c1013	COG3706	GGDEF domain
Acaty_c1015	COG2353	YceI-like domain
Acaty_c1016	COG0655	NAD(P)H dehydrogenase (quinone) activity
Acaty_c1017	COG1733	regulation of RNA biosynthetic process
Acaty_c1023	COG0438	transferase activity, transferring glycosyl groups
Acaty_c1025	COG3320	Male sterility
Acaty_c1025	COG1022	Amp-dependent synthetase and ligase
Acaty_c1030	COG3550	peptidyl-serine autophosphorylation
Acaty_c1039	COG0438	transferase activity, transferring glycosyl groups
Acaty_c1042	COG3039	Transposase
Acaty_c1049	COG0156	8-amino-7-oxononanoate synthase activity
Acaty_c1062	COG0729	surface antigen
Acaty_c1065	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Acaty_c1066	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
Acaty_c1067	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Acaty_c1068	COG0004	ammonium transporteR
Acaty_c1069	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Acaty_c1069	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Acaty_c1070	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
Acaty_c1071	COG2239	Acts as a magnesium transporter
Acaty_c1072	COG0802	atpase or kinase
Acaty_c1074	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
Acaty_c1078	COG0393	Putative heavy-metal-binding
Acaty_c1082	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Acaty_c1084	COG0429	hydrolase of the alpha beta-hydrolase fold
Acaty_c1086	COG2373	Large extracellular alpha-helical protein
Acaty_c1087	COG4953	penicillin-binding protein 1C
Acaty_c1088	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
Acaty_c1089	COG0508	dehydrogenase complex catalyzes the overall conversion of
Acaty_c1090	COG0022	dehydrogenase e1 component
Acaty_c1091	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Acaty_c1093	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Acaty_c1094	COG0574	Belongs to the PEP-utilizing enzyme family
Acaty_c1094	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Acaty_c1096	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Acaty_c1097	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Acaty_c1098	COG2171	N-acyltransferase activity
Acaty_c1102	COG0402	S-adenosylhomocysteine deaminase activity
Acaty_c1104	COG0791	NLP P60 protein
Acaty_c1104	COG1388	LysM domain
Acaty_c1112	COG2271	Major facilitator Superfamily
Acaty_c1113	COG0438	transferase activity, transferring glycosyl groups
Acaty_c1115	COG0745	RESPONSE REGULATOR receiver
Acaty_c1116	COG0811	peptide transport
Acaty_c1121	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Acaty_c1126	COG1566	PFAM secretion protein HlyD family protein
Acaty_c1129	COG2132	Multicopper oxidase
Acaty_c1131	COG2132	Multicopper oxidase
Acaty_c1132	COG0105	UTP biosynthetic process
Acaty_c1133	COG0820	rRNA (adenine-C2-)-methyltransferase activity
Acaty_c1136	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
Acaty_c1137	COG0124	histidyl-tRNA synthetase
Acaty_c1139	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Acaty_c1140	COG1160	GTP binding
Acaty_c1149	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
Acaty_c1150	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
Acaty_c1153	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
Acaty_c1155	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Acaty_c1156	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
Acaty_c1157	COG0287	Prephenate dehydrogenase
Acaty_c1158	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Acaty_c1159	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
Acaty_c1161	COG0776	regulation of translation
Acaty_c1162	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
Acaty_c1164	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Acaty_c1165	COG0544	peptidyl-prolyl cis-trans isomerase activity
Acaty_c1166	COG0740	serine-type endopeptidase activity
Acaty_c1167	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Acaty_c1168	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Acaty_c1169	COG0776	regulation of translation
Acaty_c1172	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Acaty_c1177	COG3447	MASE1 domain protein
Acaty_c1177	COG5002	protein histidine kinase activity
Acaty_c1177	COG5001	Diguanylate cyclase
Acaty_c1180	COG3039	Transposase
Acaty_c1184	COG3447	MASE1 domain protein
Acaty_c1184	COG5001	Diguanylate cyclase
Acaty_c1184	COG5002	protein histidine kinase activity
Acaty_c1197	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Acaty_c1198	COG0215	cysteine-tRNA ligase activity
Acaty_c1200	COG1530	ribonuclease E activity
Acaty_c1203	COG0546	phosphoglycolate phosphatase activity
Acaty_c1205	COG3842	ATPase activity
Acaty_c1208	COG0446	pyridine nucleotide-disulphide oxidoreductase
Acaty_c1211	COG1028	Short-chain dehydrogenase reductase Sdr
Acaty_c1212	COG0616	signal peptide processing
Acaty_c1213	COG0667	Aldo Keto reductase
Acaty_c1216	COG0840	transmembrane signaling receptor activity
Acaty_c1217	COG0784	Response regulator, receiver
Acaty_c1217	COG0835	chemotaxis
Acaty_c1220	COG2198	Histidine kinase
Acaty_c1220	COG0643	Histidine kinase
Acaty_c1222	COG0745	RESPONSE REGULATOR receiver
Acaty_c1226	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
Acaty_c1231	COG1815	bacterial-type flagellum-dependent cell motility
Acaty_c1232	COG1558	bacterial-type flagellum-dependent cell motility
Acaty_c1233	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
Acaty_c1234	COG1749	Flagellar hook protein flgE
Acaty_c1236	COG4786	Flagellar basal body rod
Acaty_c1237	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
Acaty_c1238	COG1706	bacterial-type flagellum-dependent cell motility
Acaty_c1239	COG1705	Flagellar rod assembly protein muramidase FlgJ
Acaty_c1239	COG3951	Flagellar rod assembly protein muramidase FlgJ
Acaty_c1241	COG1256	bacterial-type flagellum assembly
Acaty_c1243	COG1216	Glycosyl transferase, family 2
Acaty_c1243	COG0438	transferase activity, transferring glycosyl groups
Acaty_c1250	COG3852	Histidine kinase
Acaty_c1251	COG2204	response regulator
Acaty_c1254	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Acaty_c1262	COG1338	Plays a role in the flagellum-specific transport system
Acaty_c1263	COG1987	bacterial-type flagellum assembly
Acaty_c1266	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Acaty_c1268	COG0455	bacterial-type flagellum organization
Acaty_c1269	COG1191	sigma factor activity
Acaty_c1270	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Acaty_c1271	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Acaty_c1272	COG0670	Belongs to the BI1 family
Acaty_c1276	COG0277	FAD linked oxidase domain protein
Acaty_c1277	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
Acaty_c1278	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Acaty_c1279	COG1428	Deoxynucleoside kinase
Acaty_c1281	COG0617	tRNA 3'-terminal CCA addition
Acaty_c1284	COG0519	Catalyzes the synthesis of GMP from XMP
Acaty_c1286	COG1017	nitric oxide dioxygenase activity
Acaty_c1286	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Acaty_c1290	COG3189	MarR family transcriptional regulator
Acaty_c1291	COG0477	Major facilitator Superfamily
Acaty_c1295	COG2814	Major facilitator Superfamily
Acaty_c1296	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Acaty_c1301	COG1105	Belongs to the carbohydrate kinase PfkB family
Acaty_c1302	COG0280	phosphate acetyltransferase
Acaty_c1310	COG1914	H( )-stimulated, divalent metal cation uptake system
Acaty_c1312	COG1285	pathogenesis
Acaty_c1314	COG3657	addiction module killer protein
Acaty_c1315	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Acaty_c1316	COG3039	Transposase
Acaty_c1318	COG3706	GGDEF domain
Acaty_c1319	COG3706	GGDEF domain
Acaty_c1319	COG0745	RESPONSE REGULATOR receiver
Acaty_c1322	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Acaty_c1325	COG3706	GGDEF domain
Acaty_c1327	COG5001	Diguanylate cyclase
Acaty_c1328	COG5001	Diguanylate cyclase
Acaty_c1328	COG3447	MASE1 domain protein
Acaty_c1328	COG5002	protein histidine kinase activity
Acaty_c1333	COG3039	Transposase
Acaty_c1334	COG3039	Transposase
Acaty_c1341	COG1294	oxidase, subunit
Acaty_c1342	COG1271	oxidase subunit
Acaty_c1343	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Acaty_c1344	COG0477	Major facilitator Superfamily
Acaty_c1349	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Acaty_c1350	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Acaty_c1354	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Acaty_c1361	COG1271	oxidase subunit
Acaty_c1362	COG1294	oxidase, subunit
Acaty_c1364	COG0243	molybdopterin cofactor binding
Acaty_c1365	COG0437	4 iron, 4 sulfur cluster binding
Acaty_c1366	COG3302	dmso reductase anchor subunit
Acaty_c1372	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Acaty_c1374	COG0583	DNA-binding transcription factor activity
Acaty_c1381	COG3039	Transposase
Acaty_c1383	COG1113	amino acid transport
Acaty_c1385	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Acaty_c1391	COG2814	Major facilitator Superfamily
Acaty_c1392	COG4654	Cytochrome c, class I
Acaty_c1396	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Acaty_c1399	COG0243	molybdopterin cofactor binding
Acaty_c1400	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Acaty_c1401	COG1166	arginine decarboxylase activity
Acaty_c1402	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
Acaty_c1403	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Acaty_c1405	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Acaty_c1406	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Acaty_c1409	COG1850	ribulose-bisphosphate carboxylase activity
Acaty_c1418	COG0651	ATP synthesis coupled electron transport
Acaty_c1419	COG0649	NAD binding
Acaty_c1419	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c1419	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c1425	COG0076	glutamate decarboxylase activity
Acaty_c1426	COG0163	prenyltransferase activity
Acaty_c1427	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Acaty_c1429	COG2022	thiamine diphosphate biosynthetic process
Acaty_c1435	COG2137	regulation of response to DNA damage stimulus
Acaty_c1436	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
Acaty_c1437	COG1058	Belongs to the CinA family
Acaty_c1437	COG1546	Belongs to the CinA family
Acaty_c1439	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Acaty_c1442	COG1489	DNA binding
Acaty_c1443	COG0024	Methionine aminopeptidase
Acaty_c1445	COG2915	High frequency lysogenization protein hflD homolog
Acaty_c1448	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Acaty_c1450	COG1196	nuclear chromosome segregation
Acaty_c1451	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
Acaty_c1452	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Acaty_c1454	COG1187	pseudouridine synthase activity
Acaty_c1455	COG0446	pyridine nucleotide-disulphide oxidoreductase
Acaty_c1457	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Acaty_c1458	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
Acaty_c1459	COG0180	Tryptophanyl-tRNA synthetase
Acaty_c1460	COG1994	Peptidase M50
Acaty_c1461	COG0009	L-threonylcarbamoyladenylate synthase
Acaty_c1462	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Acaty_c1464	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
Acaty_c1464	COG3264	Mechanosensitive ion channel
Acaty_c1465	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
Acaty_c1466	COG0531	amino acid
Acaty_c1468	COG5001	Diguanylate cyclase
Acaty_c1468	COG1716	ATPase activity
Acaty_c1469	COG2205	protein histidine kinase activity
Acaty_c1469	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Acaty_c1470	COG0587	DNA-directed DNA polymerase activity
Acaty_c1473	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Acaty_c1475	COG2860	membrane
Acaty_c1477	COG0438	transferase activity, transferring glycosyl groups
Acaty_c1478	COG0438	transferase activity, transferring glycosyl groups
Acaty_c1479	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Acaty_c1483	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
Acaty_c1484	COG0196	riboflavin kinase activity
Acaty_c1485	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Acaty_c1486	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Acaty_c1490	COG4178	(ABC) transporter
Acaty_c1492	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Acaty_c1493	COG0860	N-Acetylmuramoyl-L-alanine amidase
Acaty_c1494	COG3118	belongs to the thioredoxin family
Acaty_c1496	COG0425	Belongs to the sulfur carrier protein TusA family
Acaty_c1496	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Acaty_c1501	COG0640	Transcriptional regulator
Acaty_c1503	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
Acaty_c1506	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Acaty_c1507	COG0084	hydrolase, TatD family'
Acaty_c1508	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Acaty_c1509	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Acaty_c1513	COG1183	phosphatidylcholine synthase activity
Acaty_c1514	COG0688	phosphatidylethanolamine metabolic process
Acaty_c1515	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
Acaty_c1517	COG0028	Belongs to the TPP enzyme family
Acaty_c1518	COG1193	negative regulation of DNA recombination
Acaty_c1520	COG0432	Pfam Uncharacterised protein family UPF0047
Acaty_c1521	COG0590	tRNA wobble adenosine to inosine editing
Acaty_c1527	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Acaty_c1528	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Acaty_c1529	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
Acaty_c1530	COG0232	Belongs to the dGTPase family. Type 2 subfamily
Acaty_c1531	COG0069	glutamate synthase activity
Acaty_c1531	COG0070	glutamate synthase
Acaty_c1531	COG0067	glutamate synthase
Acaty_c1532	COG0493	'glutamate synthase
Acaty_c1533	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
Acaty_c1537	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
Acaty_c1538	COG0330	HflC and HflK could
Acaty_c1539	COG0330	HflC and HflK could
Acaty_c1540	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Acaty_c1541	COG1923	regulation of RNA biosynthetic process
Acaty_c1542	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
Acaty_c1543	COG0424	maF-like protein
Acaty_c1545	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
Acaty_c1547	COG3039	Transposase
Acaty_c1565	COG1061	Type III restriction enzyme res subunit
Acaty_c1566	COG0210	DNA helicase
Acaty_c1570	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Acaty_c1577	COG2826	transposase and inactivated derivatives, IS30 family
Acaty_c1578	COG4372	Transposase
Acaty_c1579	COG2204	response regulator
Acaty_c1584	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
Acaty_c1592	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
Acaty_c1598	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Acaty_c1603	COG1752	Esterase of the alpha-beta hydrolase superfamily
Acaty_c1605	COG2271	Major facilitator Superfamily
Acaty_c1607	COG0505	Belongs to the CarA family
Acaty_c1609	COG0004	ammonium transporteR
Acaty_c1611	COG2433	Pfam Transposase IS66
Acaty_c1612	COG3436	PFAM IS66 Orf2 family protein
Acaty_c1614	COG2204	response regulator
Acaty_c1616	COG3436	PFAM IS66 Orf2 family protein
Acaty_c1617	COG2433	Pfam Transposase IS66
Acaty_c1620	COG0667	Aldo Keto reductase
Acaty_c1626	COG4974	Belongs to the 'phage' integrase family
Acaty_c1629	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Acaty_c1630	COG0650	Formate hydrogenlyase subunit 4
Acaty_c1635	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
Acaty_c1636	COG0651	ATP synthesis coupled electron transport
Acaty_c1637	COG3260	NADH ubiquinone oxidoreductase 20
Acaty_c1639	COG0651	ATP synthesis coupled electron transport
Acaty_c1642	COG2801	Transposase and inactivated derivatives
Acaty_c1647	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
Acaty_c1651	COG0322	excinuclease ABC activity
Acaty_c1653	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Acaty_c1655	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
Acaty_c1656	COG0148	phosphopyruvate hydratase activity
Acaty_c1657	COG2877	3-deoxy-8-phosphooctulonate synthase activity
Acaty_c1658	COG0504	CTP synthase activity
Acaty_c1683	COG0513	Belongs to the DEAD box helicase family
Acaty_c1687	COG0505	Belongs to the CarA family
Acaty_c1689	COG0004	ammonium transporteR
Acaty_c1695	COG3852	Histidine kinase
Acaty_c1710	COG1937	Protein conserved in bacteria
Acaty_c1712	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Acaty_c1716	COG2217	Heavy metal translocating P-type atpase
Acaty_c1725	COG2226	methyltransferase
Acaty_c1727	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Acaty_c1727	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Acaty_c1729	COG2814	Major facilitator Superfamily
Acaty_c1733	COG4232	protein-disulfide reductase activity
Acaty_c1737	COG3220	belongs to the UPF0276 family
Acaty_c1740	COG0815	Transfers the fatty acyl group on membrane lipoproteins
Acaty_c1741	COG3039	Transposase
Acaty_c1742	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Acaty_c1747	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Acaty_c1747	COG1017	nitric oxide dioxygenase activity
Acaty_c1751	COG0509	glycine decarboxylation via glycine cleavage system
Acaty_c1758	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
Acaty_c1759	COG1140	nitrate reductase beta subunit
Acaty_c1760	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
Acaty_c1761	COG2181	nitrate reductase activity
Acaty_c1762	COG2223	nitrite transmembrane transporter activity
Acaty_c1763	COG3189	MarR family transcriptional regulator
Acaty_c1765	COG1566	PFAM secretion protein HlyD family protein
Acaty_c1767	COG0477	Major facilitator Superfamily
Acaty_c1768	COG0583	DNA-binding transcription factor activity
Acaty_c1776	COG0629	single-stranded DNA binding
Acaty_c1787	COG1690	Belongs to the RtcB family
Acaty_c1788	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Acaty_c1789	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Acaty_c1799	COG2755	lipolytic protein G-D-S-L family
Acaty_c1799	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Acaty_c1805	COG1199	ATP-dependent helicase activity
Acaty_c1823	COG3561	AntA/AntB antirepressor
Acaty_c1827	COG1475	DNA binding
Acaty_c1828	COG1192	Involved in chromosome partitioning
Acaty_c1830	COG2948	multi-organism process
Acaty_c1831	COG3504	Conjugal transfer protein
Acaty_c1833	COG3701	Conjugal transfer protein
Acaty_c1845	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
Acaty_c1857	COG1598	PFAM Uncharacterised protein family UPF0150
Acaty_c1859	COG3451	type IV secretory pathway VirB4
Acaty_c1863	COG5001	Diguanylate cyclase
Acaty_c1863	COG3300	MHYT domain
Acaty_c1876	COG0741	lytic transglycosylase activity
Acaty_c1880	COG4962	Type ii secretion system protein e
Acaty_c1884	COG1487	ribonuclease activity
Acaty_c1891	COG0835	chemotaxis
Acaty_c1891	COG0784	Response regulator, receiver
Acaty_c1892	COG2198	Histidine kinase
Acaty_c1892	COG0643	Histidine kinase
Acaty_c1894	COG0745	RESPONSE REGULATOR receiver
Acaty_c1897	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Acaty_c1898	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Acaty_c1904	COG1987	bacterial-type flagellum assembly
Acaty_c1908	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Acaty_c1913	COG0438	transferase activity, transferring glycosyl groups
Acaty_c1913	COG1216	Glycosyl transferase, family 2
Acaty_c1917	COG1706	bacterial-type flagellum-dependent cell motility
Acaty_c1919	COG4786	Flagellar basal body rod
Acaty_c1920	COG1749	Flagellar hook protein flgE
Acaty_c1921	COG1815	bacterial-type flagellum-dependent cell motility
Acaty_c1922	COG3604	Transcriptional regulator
Acaty_c1937	COG0582	viral genome integration into host DNA
Acaty_c1940	COG0084	hydrolase, TatD family'
Acaty_c1941	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Acaty_c1943	COG0628	permease
Acaty_c1944	COG0613	PHP domain protein
Acaty_c1946	COG0628	permease
Acaty_c1949	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Acaty_c1952	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Acaty_c1953	COG1758	RNA polymerase activity
Acaty_c1955	COG1561	YicC-like family, N-terminal region
Acaty_c1956	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
Acaty_c1958	COG4232	protein-disulfide reductase activity
Acaty_c1959	COG1324	tolerance protein
Acaty_c1965	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
Acaty_c1970	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Acaty_c1971	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Acaty_c1972	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Acaty_c1975	COG3025	triphosphatase activity
Acaty_c1977	COG0308	aminopeptidase N
Acaty_c1979	COG0542	response to heat
Acaty_c1980	COG2211	Major facilitator Superfamily
Acaty_c1981	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
Acaty_c1982	COG1469	GTP cyclohydrolase I activity
Acaty_c1983	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
Acaty_c1984	COG0142	geranyltranstransferase activity
Acaty_c1986	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Acaty_c1987	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Acaty_c1988	COG1862	Preprotein translocase
Acaty_c1989	COG0343	queuine tRNA-ribosyltransferase activity
Acaty_c1990	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
Acaty_c1991	COG1253	flavin adenine dinucleotide binding
Acaty_c1994	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
Acaty_c1996	COG0285	dihydrofolate synthase activity
Acaty_c1997	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
Acaty_c1998	COG0159	tryptophan synthase activity
Acaty_c1999	COG0133	tryptophan synthase activity
Acaty_c2000	COG0135	phosphoribosylanthranilate isomerase activity
Acaty_c2001	COG0101	tRNA pseudouridine synthase activity
Acaty_c2003	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
Acaty_c2006	COG0746	molybdenum cofactor guanylyltransferase activity
Acaty_c2007	COG1763	Mo-molybdopterin cofactor biosynthetic process
Acaty_c2008	COG0303	'Molybdopterin
Acaty_c2009	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Acaty_c2013	COG0415	Belongs to the DNA photolyase family
Acaty_c2015	COG1294	oxidase, subunit
Acaty_c2016	COG1271	oxidase subunit
Acaty_c2018	COG3039	Transposase
Acaty_c2025	COG0583	DNA-binding transcription factor activity
Acaty_c2028	COG1566	PFAM secretion protein HlyD family protein
Acaty_c2030	COG2814	Major facilitator Superfamily
Acaty_c2032	COG3039	Transposase
Acaty_c2034	COG0842	Transport permease protein
Acaty_c2035	COG0842	Transport permease protein
Acaty_c2036	COG1131	(ABC) transporter
Acaty_c2038	COG2814	Major facilitator Superfamily
Acaty_c2039	COG0589	response to stress
Acaty_c2041	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Acaty_c2041	COG0047	phosphoribosylformylglycinamidine synthase activity
Acaty_c2042	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
Acaty_c2043	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Acaty_c2045	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Acaty_c2047	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
Acaty_c2048	COG0459	protein refolding
Acaty_c2050	COG0529	Catalyzes the synthesis of activated sulfate
Acaty_c2050	COG2046	Belongs to the sulfate adenylyltransferase family
Acaty_c2052	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Acaty_c2053	COG3258	Cytochrome c
Acaty_c2055	COG1333	cytochrome c biogenesis protein
Acaty_c2057	COG0737	Belongs to the 5'-nucleotidase family
Acaty_c2062	COG1845	cytochrome c oxidase, subunit III
Acaty_c2063	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Acaty_c2064	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Acaty_c2066	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Acaty_c2067	COG0154	amidase activity
Acaty_c2068	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Acaty_c2075	COG3394	polysaccharide catabolic process
Acaty_c2076	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Acaty_c2078	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Acaty_c2080	COG1657	PFAM Prenyltransferase squalene oxidase
Acaty_c2081	COG1562	ergosterol biosynthetic process
Acaty_c2082	COG1136	(ABC) transporter
Acaty_c2086	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
Acaty_c2089	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Acaty_c2090	COG1127	ABC transporter
Acaty_c2091	COG1538	Outer membrane efflux protein
Acaty_c2100	COG4115	mRNA cleavage
Acaty_c2101	COG2161	toxin-antitoxin pair type II binding
Acaty_c2103	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Acaty_c2104	COG0358	DNA primase activity
Acaty_c2105	COG1193	negative regulation of DNA recombination
Acaty_c2106	COG1610	YqeY-like protein
Acaty_c2107	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Acaty_c2109	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
Acaty_c2110	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
Acaty_c2112	COG0326	Molecular chaperone. Has ATPase activity
Acaty_c2113	COG2363	Small membrane protein
Acaty_c2119	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Acaty_c2122	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Acaty_c2123	COG1271	oxidase subunit
Acaty_c2124	COG1294	oxidase, subunit
Acaty_c2128	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
Acaty_c2132	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
Acaty_c2133	COG0037	tRNA processing
Acaty_c2134	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
Acaty_c2134	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
Acaty_c2136	COG0736	holo-[acyl-carrier-protein] synthase activity
Acaty_c2137	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Acaty_c2138	COG1381	Involved in DNA repair and RecF pathway recombination
Acaty_c2139	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Acaty_c2143	COG0481	GTPase activity
Acaty_c2144	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Acaty_c2147	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
Acaty_c2150	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
Acaty_c2151	COG4988	ABC transporter
Acaty_c2158	COG1214	PFAM Peptidase M22, glycoprotease
Acaty_c2159	COG1199	ATP-dependent helicase activity
Acaty_c2161	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Acaty_c2162	COG0791	NLP P60 protein
Acaty_c2167	COG0859	PFAM glycosyl transferase family 9
Acaty_c2168	COG0586	Pfam SNARE associated Golgi protein
Acaty_c2184	COG0644	oxidoreductase
Acaty_c2185	COG0095	Lipoate-protein ligase
Acaty_c2187	COG0509	glycine decarboxylation via glycine cleavage system
Acaty_c2189	COG0509	glycine decarboxylation via glycine cleavage system
Acaty_c2190	COG2048	Heterodisulfide reductase, subunit B
Acaty_c2196	COG2210	Belongs to the sulfur carrier protein TusA family
Acaty_c2197	COG0425	Belongs to the sulfur carrier protein TusA family
Acaty_c2198	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Acaty_c2199	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Acaty_c2200	COG3302	dmso reductase anchor subunit
Acaty_c2201	COG0437	4 iron, 4 sulfur cluster binding
Acaty_c2202	COG0243	molybdopterin cofactor binding
Acaty_c2204	COG0315	cyclic pyranopterin monophosphate synthase activity
Acaty_c2206	COG5000	phosphorelay sensor kinase activity
Acaty_c2212	COG3439	Domain of unknown function DUF302
Acaty_c2213	COG0737	Belongs to the 5'-nucleotidase family
Acaty_c2214	COG1077	Cell shape determining protein MreB Mrl
Acaty_c2215	COG1792	Involved in formation and maintenance of cell shape
Acaty_c2217	COG0768	penicillin binding
Acaty_c2218	COG0772	Belongs to the SEDS family
Acaty_c2219	COG1686	Belongs to the peptidase S11 family
Acaty_c2221	COG0321	lipoyl(octanoyl) transferase activity
Acaty_c2222	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Acaty_c2232	COG0751	glycine-tRNA ligase activity
Acaty_c2233	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
Acaty_c2238	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Acaty_c2239	COG2154	pterin-4-alpha-carbinolamine dehydratase
Acaty_c2240	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Acaty_c2242	COG3023	N-Acetylmuramoyl-L-alanine amidase
Acaty_c2244	COG0450	alkyl hydroperoxide reductase
Acaty_c2245	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Acaty_c2251	COG0247	lactate metabolic process
Acaty_c2252	COG0277	FAD linked oxidase domain protein
Acaty_c2253	COG0277	FAD linked oxidase domain protein
Acaty_c2256	COG1414	Transcriptional regulator
Acaty_c2260	COG3604	Transcriptional regulator
Acaty_c2265	COG0242	peptide deformylase activity
Acaty_c2267	COG0235	Class ii aldolase
Acaty_c2268	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
Acaty_c2270	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
Acaty_c2272	COG0564	pseudouridine synthase activity
Acaty_c2275	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Acaty_c2275	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Acaty_c2278	COG0045	succinate-CoA ligase (ADP-forming) activity
Acaty_c2279	COG0538	isocitrate dehydrogenase activity
Acaty_c2280	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
Acaty_c2282	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Acaty_c2283	COG1388	LysM domain
Acaty_c2283	COG0741	lytic transglycosylase activity
Acaty_c2285	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
Acaty_c2287	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Acaty_c2288	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Acaty_c2290	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Acaty_c2291	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
Acaty_c2292	COG0137	argininosuccinate synthase activity
Acaty_c2294	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Acaty_c2295	COG0328	RNA-DNA hybrid ribonuclease activity
Acaty_c2296	COG2226	methyltransferase
Acaty_c2298	COG0612	Peptidase, M16
Acaty_c2299	COG1185	polyribonucleotide nucleotidyltransferase activity
Acaty_c2300	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Acaty_c2301	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Acaty_c2302	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Acaty_c2303	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Acaty_c2304	COG0195	Participates in both transcription termination and antitermination
Acaty_c2305	COG0779	Required for maturation of 30S ribosomal subunits
Acaty_c2313	COG1266	CAAX protease self-immunity
Acaty_c2315	COG1388	LysM domain
Acaty_c2315	COG1376	ErfK ybiS ycfS ynhG family protein
Acaty_c2317	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Acaty_c2318	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Acaty_c2320	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
Acaty_c2323	COG0492	ferredoxin-NADP+ reductase activity
Acaty_c2324	COG1193	negative regulation of DNA recombination
Acaty_c2326	COG0585	pseudouridine synthase activity
Acaty_c2327	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
Acaty_c2328	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
Acaty_c2329	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Acaty_c2330	COG0560	Phosphoserine phosphatase
Acaty_c2331	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Acaty_c2331	COG0678	peroxiredoxin activity
Acaty_c2332	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Acaty_c2338	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
Acaty_c2339	COG2003	Belongs to the UPF0758 family
Acaty_c2340	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Acaty_c2341	COG0756	dUTP diphosphatase activity
Acaty_c2343	COG0717	Belongs to the dCTP deaminase family
Acaty_c2344	COG0489	protein tyrosine kinase activity
Acaty_c2346	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
Acaty_c2347	COG0484	heat shock protein binding
Acaty_c2348	COG0443	Heat shock 70 kDa protein
Acaty_c2349	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
Acaty_c2350	COG1420	regulation of RNA biosynthetic process
Acaty_c2351	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Acaty_c2352	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Acaty_c2353	COG3046	protein related to deoxyribodipyrimidine photolyase
Acaty_c2360	COG1028	Short-chain dehydrogenase reductase Sdr
Acaty_c2370	COG4221	oxidoreductase activity
Acaty_c2372	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Acaty_c2374	COG0312	modulator of DNA gyrase
Acaty_c2375	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Acaty_c2376	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Acaty_c2377	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Acaty_c2379	COG0149	triose-phosphate isomerase activity
Acaty_c2380	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Acaty_c2382	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c2383	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c2384	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c2385	COG0649	NAD binding
Acaty_c2386	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
Acaty_c2388	COG1034	ATP synthesis coupled electron transport
Acaty_c2389	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
Acaty_c2390	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c2392	COG0713	ATP synthesis coupled electron transport
Acaty_c2395	COG1007	ATP synthesis coupled electron transport
Acaty_c2398	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Acaty_c2399	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
Acaty_c2400	COG0291	Belongs to the bacterial ribosomal protein bL35 family
Acaty_c2401	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Acaty_c2402	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Acaty_c2403	COG0072	phenylalanine-tRNA ligase activity
Acaty_c2404	COG0776	regulation of translation
Acaty_c2407	COG1116	anion transmembrane transporter activity
Acaty_c2409	COG0469	pyruvate kinase activity
Acaty_c2410	COG0469	pyruvate kinase activity
Acaty_c2415	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c2416	COG0649	NAD binding
Acaty_c2416	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c2416	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c2417	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c2417	COG0649	NAD binding
Acaty_c2417	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c2418	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
Acaty_c2420	COG1034	ATP synthesis coupled electron transport
Acaty_c2421	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
Acaty_c2422	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Acaty_c2425	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Acaty_c2427	COG1007	ATP synthesis coupled electron transport
Acaty_c2429	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Acaty_c2433	COG0735	belongs to the Fur family
Acaty_c2434	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Acaty_c2436	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Acaty_c2437	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
Acaty_c2440	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Acaty_c2443	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Acaty_c2444	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Acaty_c2455	COG1872	DUF167
Acaty_c2456	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
Acaty_c2458	COG1566	PFAM secretion protein HlyD family protein
Acaty_c2460	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Acaty_c2465	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Acaty_c2465	COG0543	2 iron, 2 sulfur cluster binding
Acaty_c2466	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Acaty_c2467	COG0390	transport system, permease component
Acaty_c2468	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
Acaty_c2469	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
Acaty_c2470	COG0501	Belongs to the peptidase M48B family
Acaty_c2471	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
Acaty_c2472	COG2226	methyltransferase
Acaty_c2473	COG0596	Alpha beta hydrolase
Acaty_c2474	COG0156	8-amino-7-oxononanoate synthase activity
Acaty_c2475	COG1040	competence protein
Acaty_c2476	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Acaty_c2477	COG0477	Major facilitator Superfamily
Acaty_c2478	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Acaty_c2479	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
Acaty_c2482	COG0859	PFAM glycosyl transferase family 9
Acaty_c2487	COG0438	transferase activity, transferring glycosyl groups
Acaty_c2489	COG0463	Glycosyl transferase, family 2
Acaty_c2490	COG0494	nUDIX hydrolase
Acaty_c2491	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Acaty_c2492	COG0653	protein targeting
Acaty_c2493	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
Acaty_c2494	COG0625	glutathione transferase activity
Acaty_c2497	COG2001	Belongs to the MraZ family
Acaty_c2498	COG0275	rRNA processing
Acaty_c2502	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Acaty_c2503	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Acaty_c2504	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Acaty_c2505	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
Acaty_c2506	COG0772	Belongs to the SEDS family
Acaty_c2507	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Acaty_c2508	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Acaty_c2509	COG0812	UDP-N-acetylmuramate dehydrogenase activity
Acaty_c2510	COG1181	Belongs to the D-alanine--D-alanine ligase family
Acaty_c2511	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
Acaty_c2514	COG0058	SHG alpha-glucan phosphorylase activity
Acaty_c2515	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Acaty_c2517	COG0793	Belongs to the peptidase S41A family
Acaty_c2518	COG0693	protein deglycase activity
Acaty_c2519	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Acaty_c2520	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Acaty_c2521	COG0542	response to heat
Acaty_c2522	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Acaty_c2523	COG2813	Specifically methylates the guanine in position
Acaty_c2523	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Acaty_c2524	COG0625	glutathione transferase activity
Acaty_c2526	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
Acaty_c2533	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Acaty_c2535	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Acaty_c2536	COG0768	penicillin binding
Acaty_c2538	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Acaty_c2540	COG0823	Involved in the tonB-independent uptake of proteins
Acaty_c2542	COG0583	DNA-binding transcription factor activity
Acaty_c2544	COG0261	This protein binds to 23S rRNA in the presence of protein L20
Acaty_c2545	COG0211	Belongs to the bacterial ribosomal protein bL27 family
Acaty_c2546	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Acaty_c2547	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Acaty_c2548	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
Acaty_c2549	COG2885	chlorophyll binding
Acaty_c2549	COG3047	cAMP biosynthetic process
Acaty_c2550	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
Acaty_c2551	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
Acaty_c2554	COG0165	Argininosuccinate lyase
Acaty_c2557	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
Acaty_c2559	COG1611	Belongs to the LOG family
Acaty_c2560	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Acaty_c2560	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Acaty_c2561	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Acaty_c2562	COG0218	Necessary for normal cell division and for the maintenance of normal septation
Acaty_c2563	COG1333	cytochrome c biogenesis protein
Acaty_c2564	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Acaty_c2566	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
Acaty_c2568	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Acaty_c2569	COG3386	PFAM SMP-30 Gluconolaconase
Acaty_c2571	COG2814	Major facilitator Superfamily
Acaty_c2572	COG0488	(ABC) transporter
Acaty_c2584	COG3179	chitinase
Acaty_c2595	COG4964	Belongs to the GSP D family
Acaty_c2608	COG0792	nuclease activity
Acaty_c2609	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
Acaty_c2610	COG0277	FAD linked oxidase domain protein
Acaty_c2612	COG0859	PFAM glycosyl transferase family 9
Acaty_c2615	COG0583	DNA-binding transcription factor activity
Acaty_c2620	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Acaty_c2622	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
Acaty_c2623	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
Acaty_c2625	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
Acaty_c2626	COG2833	Protein of unknown function (DUF455)
Acaty_c2632	COG0386	Belongs to the glutathione peroxidase family
Acaty_c2639	COG2095	MarC family integral membrane protein
Acaty_c2641	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
Acaty_c2642	COG1051	belongs to the nudix hydrolase family
Acaty_c2643	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Acaty_c2645	COG0217	transcriptional regulatory protein
Acaty_c2646	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
Acaty_c2647	COG0632	four-way junction helicase activity
Acaty_c2648	COG2255	four-way junction helicase activity
Acaty_c2649	COG0824	Thioesterase
Acaty_c2653	COG0823	Involved in the tonB-independent uptake of proteins
Acaty_c2654	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Acaty_c2655	COG0602	queuosine metabolic process
Acaty_c2658	COG0181	hydroxymethylbilane synthase activity
Acaty_c2660	COG0113	porphobilinogen synthase activity
Acaty_c2662	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
Acaty_c2663	COG0477	Major facilitator Superfamily
Acaty_c2664	COG1272	protein, Hemolysin III
Acaty_c2669	COG1530	ribonuclease E activity
Acaty_c2670	COG0424	maF-like protein
Acaty_c2673	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
Acaty_c2675	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
Acaty_c2678	COG1560	Kdo2-lipid A biosynthetic process
Acaty_c2680	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Acaty_c2681	COG0706	membrane insertase activity
Acaty_c2682	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
Acaty_c2683	COG0594	ribonuclease P activity
Acaty_c2684	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Acaty_c2685	COG1127	ABC transporter
Acaty_c2686	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Acaty_c2687	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Acaty_c2690	COG1131	(ABC) transporter
Acaty_c2691	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
Acaty_c2692	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
Acaty_c2694	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Acaty_c2697	COG0018	arginyl-trna synthetase
Acaty_c2698	COG0477	Major facilitator Superfamily
Acaty_c2699	COG0583	DNA-binding transcription factor activity
Acaty_c2701	COG0708	Exodeoxyribonuclease III
Acaty_c2703	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
Acaty_c2704	COG0625	glutathione transferase activity
Acaty_c2705	COG0708	Exodeoxyribonuclease III
Acaty_c2706	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Acaty_c2707	COG1047	Peptidyl-prolyl cis-trans
Acaty_c2708	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
Acaty_c2709	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Acaty_c2713	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
Acaty_c2714	COG0237	dephospho-CoA kinase activity
Acaty_c2715	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
Acaty_c2716	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Acaty_c2719	COG0741	lytic transglycosylase activity
Acaty_c2719	COG0739	heme binding
Acaty_c2719	COG1196	nuclear chromosome segregation
Acaty_c2720	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
Acaty_c2722	COG2264	protein methyltransferase activity
Acaty_c2723	COG0439	Biotin carboxylase
Acaty_c2724	COG0511	ligase activity, forming carbon-carbon bonds
Acaty_c2725	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
Acaty_c2726	COG0778	Nitroreductase
Acaty_c2730	COG1555	photosystem II stabilization
Acaty_c2731	COG0537	adenosine 5'-monophosphoramidase activity
Acaty_c2732	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
Acaty_c2733	COG0352	thiamine-phosphate diphosphorylase activity
Acaty_c2734	COG0351	phosphomethylpyrimidine kinase
Acaty_c2736	COG1028	Short-chain dehydrogenase reductase Sdr
Acaty_m0011	COG0629	single-stranded DNA binding
Acaty_m0016	COG0187	DNA topoisomerase II activity
Acaty_m0018	COG3039	Transposase
Acaty_m0023	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Acaty_m0027	COG1113	amino acid transport
Acaty_m0030	COG2308	Evidence 4 Homologs of previously reported genes of
Acaty_m0038	COG3852	Histidine kinase
Acaty_m0040	COG3039	Transposase
Acaty_m0046	COG0004	ammonium transporteR
Acaty_m0048	COG0505	Belongs to the CarA family
Acaty_m0049	COG0347	Belongs to the P(II) protein family
Acaty_m0056	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Acaty_m0057	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
Acaty_m0066	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Acaty_m0077	COG0741	lytic transglycosylase activity
Acaty_m0084	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Acaty_m0091	COG0583	DNA-binding transcription factor activity
Acaty_m0093	COG2801	Transposase and inactivated derivatives
Acaty_m0094	COG2801	Transposase and inactivated derivatives
Acaty_m0095	COG3039	Transposase
Acaty_m0098	COG0463	Glycosyl transferase, family 2
Acaty_m0106	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Acaty_m0108	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
Acaty_m0111	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
Acaty_m0117	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Acaty_m0118	COG0745	RESPONSE REGULATOR receiver
Acaty_m0119	COG1937	Protein conserved in bacteria
Acaty_m0125	COG3039	Transposase
Acaty_m0127	COG3039	Transposase
Acaty_m0132	COG0210	DNA helicase
Acaty_m0138	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Acaty_m0142	COG1192	Involved in chromosome partitioning
Acaty_m0162	COG0542	response to heat
Acaty_m0185	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Acaty_m0185	COG0446	pyridine nucleotide-disulphide oxidoreductase
Acaty_m0187	COG0174	glutamine synthetase
Acaty_m0188	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
Acaty_m0190	COG0069	glutamate synthase activity
Acaty_m0191	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Acaty_m0201	COG4974	Belongs to the 'phage' integrase family