A5904_00005 SM00382 ATPases associated with a variety of cellular activities A5904_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain A5904_00010 SM00480 DNA polymerase III beta subunit A5904_00020 SM00387 Histidine kinase-like ATPases A5904_00020 SM00433 TopoisomeraseII A5904_00050 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A5904_00050 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A5904_00050 SM00493 A5904_00050 A5904_00065 SM00257 Lysin motif A5904_00085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5904_00085 SM00387 Histidine kinase-like ATPases A5904_00085 SM00388 His Kinase A (phosphoacceptor) domain A5904_00090 SM00382 ATPases associated with a variety of cellular activities A5904_00090 SM00448 cheY-homologous receiver domain A5904_00095 SM00852 Probable molybdopterin binding domain A5904_00105 SM01228 A5904_00105 A5904_00120 SM00470 ParB-like nuclease domain A5904_00160 SM00382 ATPases associated with a variety of cellular activities A5904_00250 SM00267 diguanylate cyclase A5904_00260 SM00271 DnaJ molecular chaperone homology domain A5904_00275 SM00387 Histidine kinase-like ATPases A5904_00275 SM00388 His Kinase A (phosphoacceptor) domain A5904_00280 SM00448 cheY-homologous receiver domain A5904_00280 SM00862 Transcriptional regulatory protein, C terminal A5904_00340 SM00861 Transketolase, pyrimidine binding domain A5904_00345 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A5904_00420 SM00382 ATPases associated with a variety of cellular activities A5904_00560 SM00267 diguanylate cyclase A5904_00655 SM00382 ATPases associated with a variety of cellular activities A5904_00700 SM01120 A5904_00700 A5904_00715 SM00052 Putative diguanylate phosphodiesterase A5904_00715 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A5904_00715 SM00091 PAS domain A5904_00715 SM00267 diguanylate cyclase A5904_00725 SM00382 ATPases associated with a variety of cellular activities A5904_00730 SM01005 Alanine racemase, C-terminal domain A5904_00740 SM00382 ATPases associated with a variety of cellular activities A5904_00830 SM00052 Putative diguanylate phosphodiesterase A5904_00830 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A5904_00830 SM00267 diguanylate cyclase A5904_00835 SM00382 ATPases associated with a variety of cellular activities A5904_00870 SM00382 ATPases associated with a variety of cellular activities A5904_00870 SM00448 cheY-homologous receiver domain A5904_00880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5904_00880 SM00387 Histidine kinase-like ATPases A5904_00880 SM00388 His Kinase A (phosphoacceptor) domain A5904_00900 SM00732 Likely ribonuclease with RNase H fold. A5904_00940 SM00899 A5904_00940 A5904_00955 SM00861 Transketolase, pyrimidine binding domain A5904_00975 SM00448 cheY-homologous receiver domain A5904_00975 SM00862 Transcriptional regulatory protein, C terminal A5904_00980 SM00387 Histidine kinase-like ATPases A5904_00980 SM00388 His Kinase A (phosphoacceptor) domain A5904_01050 SM00838 Elongation factor G C-terminus A5904_01065 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A5904_01065 SM01232 A5904_01065 A5904_01070 SM00450 Rhodanese Homology Domain A5904_01075 SM01230 A5904_01075 A5904_01080 SM01230 A5904_01080 A5904_01135 SM00937 A5904_01135 A5904_01150 SM00382 ATPases associated with a variety of cellular activities A5904_01210 SM00450 Rhodanese Homology Domain A5904_01230 SM00996 S-adenosyl-L-homocysteine hydrolase A5904_01230 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A5904_01245 SM00244 prohibitin homologues A5904_01255 SM00642 Alpha-amylase domain A5904_01395 SM00116 Domain in cystathionine beta-synthase and other proteins. A5904_01415 SM00382 ATPases associated with a variety of cellular activities A5904_01460 SM01204 A5904_01460 A5904_01465 SM00478 endonuclease III A5904_01525 SM00382 ATPases associated with a variety of cellular activities A5904_01525 SM00448 cheY-homologous receiver domain A5904_01535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5904_01535 SM00387 Histidine kinase-like ATPases A5904_01535 SM00388 His Kinase A (phosphoacceptor) domain A5904_01545 SM00382 ATPases associated with a variety of cellular activities A5904_01570 SM00478 endonuclease III A5904_01625 SM01011 Aminopeptidase P, N-terminal domain A5904_01665 SM01103 A5904_01665 A5904_01705 SM00974 A5904_01705 A5904_01720 SM00966 SpoVT / AbrB like domain A5904_01770 SM00859 Semialdehyde dehydrogenase, NAD binding domain A5904_01815 SM00936 Penicillin-binding protein 5, C-terminal domain A5904_01845 SM00387 Histidine kinase-like ATPases A5904_01845 SM00388 His Kinase A (phosphoacceptor) domain A5904_01850 SM00448 cheY-homologous receiver domain A5904_01850 SM00862 Transcriptional regulatory protein, C terminal A5904_01860 SM01400 A5904_01860 A5904_01880 SM00028 Tetratricopeptide repeats A5904_01895 SM00937 A5904_01895 A5904_01905 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A5904_01905 SM01232 A5904_01905 A5904_01930 SM00382 ATPases associated with a variety of cellular activities A5904_01930 SM00962 SRP54-type protein, GTPase domain A5904_01930 SM00963 SRP54-type protein, helical bundle domain A5904_01935 SM00382 ATPases associated with a variety of cellular activities A5904_01960 SM00382 ATPases associated with a variety of cellular activities A5904_01960 SM01086 C-terminal, D2-small domain, of ClpB protein A5904_01990 SM00822 A5904_01990 A5904_02010 SM00028 Tetratricopeptide repeats A5904_02035 SM01126 A5904_02035 A5904_02040 SM01126 A5904_02040 A5904_02065 SM00487 DEAD-like helicases superfamily A5904_02065 SM00490 helicase superfamily c-terminal domain A5904_02070 SM00357 Cold shock protein domain A5904_02145 SM00382 ATPases associated with a variety of cellular activities A5904_02160 SM00487 DEAD-like helicases superfamily A5904_02160 SM00490 helicase superfamily c-terminal domain A5904_02225 SM00729 Elongator protein 3, MiaB family, Radical SAM A5904_02240 SM00116 Domain in cystathionine beta-synthase and other proteins. A5904_02240 SM01091 Transporter associated domain A5904_02355 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5904_02360 SM00849 Metallo-beta-lactamase superfamily A5904_02385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5904_02395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5904_02440 SM00382 ATPases associated with a variety of cellular activities A5904_02440 SM00962 SRP54-type protein, GTPase domain A5904_02440 SM00963 SRP54-type protein, helical bundle domain A5904_02480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A5904_02535 SM00671 Sel1-like repeats. A5904_02590 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A5904_02590 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A5904_02595 SM00649 Ribosomal protein L11/L12 A5904_02620 SM00663 RNA polymerase I subunit A N-terminus A5904_02635 SM00838 Elongation factor G C-terminus A5904_02635 SM00889 Elongation factor G, domain IV A5904_02650 SM01403 A5904_02650 A5904_02670 SM01382 A5904_02670 A5904_02670 SM01383 A5904_02670 A5904_02685 SM00322 K homology RNA-binding domain A5904_02705 SM01374 A5904_02705 A5904_02710 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A5904_02765 SM00316 Ribosomal protein S1-like RNA-binding domain A5904_02785 SM00363 S4 RNA-binding domain A5904_02785 SM01390 A5904_02785 A5904_02790 SM00662 RNA polymerases D A5904_02905 SM00851 MGS-like domain A5904_02905 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A5904_02910 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A5904_02960 SM00382 ATPases associated with a variety of cellular activities A5904_02970 SM00986 Uracil DNA glycosylase superfamily A5904_02970 SM00987 UreE urease accessory protein, C-terminal domain A5904_02990 SM00479 A5904_02990 A5904_02995 SM00448 cheY-homologous receiver domain A5904_02995 SM00862 Transcriptional regulatory protein, C terminal A5904_03045 SM00257 Lysin motif A5904_03075 SM01209 A5904_03075 A5904_03075 SM01210 A5904_03075 A5904_03080 SM00798 AICARFT/IMPCHase bienzyme A5904_03080 SM00851 MGS-like domain A5904_03135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A5904_03285 SM01219 A5904_03285 A5904_03290 SM00341 Helicase and RNase D C-terminal A5904_03290 SM00487 DEAD-like helicases superfamily A5904_03290 SM00490 helicase superfamily c-terminal domain A5904_03290 SM00956 A5904_03290 A5904_03320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5904_03320 SM00387 Histidine kinase-like ATPases A5904_03320 SM00388 His Kinase A (phosphoacceptor) domain A5904_03325 SM00382 ATPases associated with a variety of cellular activities A5904_03325 SM00448 cheY-homologous receiver domain A5904_03355 SM01126 A5904_03355 A5904_03360 SM01126 A5904_03360 A5904_03445 SM00382 ATPases associated with a variety of cellular activities A5904_03510 SM00849 Metallo-beta-lactamase superfamily A5904_03510 SM01027 Beta-Casp domain A5904_03565 SM00357 Cold shock protein domain A5904_03565 SM00382 ATPases associated with a variety of cellular activities A5904_03565 SM00959 Rho termination factor, N-terminal domain A5904_03575 SM00919 Malic enzyme, NAD binding domain A5904_03575 SM01274 A5904_03575 A5904_03610 SM00382 ATPases associated with a variety of cellular activities A5904_03675 SM00448 cheY-homologous receiver domain A5904_03675 SM00862 Transcriptional regulatory protein, C terminal A5904_03680 SM00091 PAS domain A5904_03680 SM00387 Histidine kinase-like ATPases A5904_03680 SM00388 His Kinase A (phosphoacceptor) domain A5904_03685 SM00382 ATPases associated with a variety of cellular activities A5904_03740 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A5904_03750 SM00935 Outer membrane protein (OmpH-like) A5904_03790 SM00481 DNA polymerase alpha chain like domain A5904_03800 SM00977 TilS substrate C-terminal domain A5904_03830 SM00671 Sel1-like repeats. A5904_03845 SM00382 ATPases associated with a variety of cellular activities A5904_03930 SM00382 ATPases associated with a variety of cellular activities A5904_04035 SM00564 beta-propeller repeat A5904_04085 SM00382 ATPases associated with a variety of cellular activities A5904_04095 SM00460 Transglutaminase/protease-like homologues A5904_04100 SM00382 ATPases associated with a variety of cellular activities A5904_04145 SM00961 Ribulose bisphosphate carboxylase, small chain A5904_04170 SM00877 A5904_04170 A5904_04175 SM00877 A5904_04175 A5904_04180 SM00877 A5904_04180 A5904_04205 SM00327 von Willebrand factor (vWF) type A domain A5904_04225 SM00938 Nitrogen regulatory protein P-II A5904_04240 SM00877 A5904_04240 A5904_04265 SM00387 Histidine kinase-like ATPases A5904_04265 SM00388 His Kinase A (phosphoacceptor) domain A5904_04270 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5904_04280 SM01350 A5904_04280 A5904_04320 SM00100 Cyclic nucleotide-monophosphate binding domain A5904_04325 SM00464 Found in ATP-dependent protease La (LON) A5904_04330 SM00729 Elongator protein 3, MiaB family, Radical SAM A5904_04390 SM00226 Low molecular weight phosphatase family A5904_04395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5904_04475 SM00465 GIY-YIG type nucleases (URI domain) A5904_04475 SM00479 A5904_04475 A5904_04525 SM00316 Ribosomal protein S1-like RNA-binding domain A5904_04525 SM00357 Cold shock protein domain A5904_04525 SM00955 A5904_04525 A5904_04545 SM00852 Probable molybdopterin binding domain A5904_04595 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A5904_04600 SM00822 A5904_04600 A5904_04605 SM00823 Phosphopantetheine attachment site A5904_04610 SM00825 Beta-ketoacyl synthase A5904_04845 SM00422 helix_turn_helix, mercury resistance A5904_04875 SM00422 helix_turn_helix, mercury resistance A5904_05040 SM00382 ATPases associated with a variety of cellular activities A5904_05060 SM00422 helix_turn_helix, mercury resistance A5904_05115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A5904_05115 SM00091 PAS domain A5904_05115 SM00267 diguanylate cyclase A5904_05120 SM00867 YceI-like domain A5904_05205 SM00487 DEAD-like helicases superfamily A5904_05245 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A5904_05245 SM00382 ATPases associated with a variety of cellular activities A5904_05250 SM00448 cheY-homologous receiver domain A5904_05250 SM01012 A5904_05250 A5904_05270 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5904_05330 SM00974 A5904_05330 A5904_05490 SM00487 DEAD-like helicases superfamily A5904_05540 SM00986 Uracil DNA glycosylase superfamily A5904_05540 SM00987 UreE urease accessory protein, C-terminal domain A5904_05795 SM00052 Putative diguanylate phosphodiesterase A5904_05855 SM00470 ParB-like nuclease domain A5904_06040 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A5904_06040 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A5904_06040 SM00493 A5904_06040 A5904_06100 SM00411 bacterial (prokaryotic) histone like domain A5904_06195 SM00470 ParB-like nuclease domain A5904_06205 SM00530 Helix-turn-helix XRE-family like proteins A5904_06215 SM00530 Helix-turn-helix XRE-family like proteins A5904_06300 SM00382 ATPases associated with a variety of cellular activities A5904_06310 SM00493 A5904_06310 A5904_06330 SM00116 Domain in cystathionine beta-synthase and other proteins. A5904_06340 SM00853 MutL C terminal dimerisation domain A5904_06340 SM01340 A5904_06340 A5904_06410 SM01359 A5904_06410 A5904_06410 SM01360 A5904_06410 A5904_06430 SM00861 Transketolase, pyrimidine binding domain A5904_06560 SM00862 Transcriptional regulatory protein, C terminal A5904_06595 SM00382 ATPases associated with a variety of cellular activities A5904_06630 SM00562 A5904_06630 A5904_06640 SM00028 Tetratricopeptide repeats A5904_06645 SM00530 Helix-turn-helix XRE-family like proteins A5904_06665 SM00564 beta-propeller repeat A5904_06680 SM00855 Phosphoglycerate mutase family A5904_06735 SM00434 DNA Topoisomerase IV A5904_06745 SM00830 Chorismate mutase type II A5904_06775 SM00316 Ribosomal protein S1-like RNA-binding domain A5904_06780 SM00411 bacterial (prokaryotic) histone like domain A5904_06790 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A5904_06810 SM00382 ATPases associated with a variety of cellular activities A5904_06810 SM00994 ClpX C4-type zinc finger A5904_06810 SM01086 C-terminal, D2-small domain, of ClpB protein A5904_06815 SM00382 ATPases associated with a variety of cellular activities A5904_06815 SM00464 Found in ATP-dependent protease La (LON) A5904_06820 SM00411 bacterial (prokaryotic) histone like domain A5904_06865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A5904_06865 SM00267 diguanylate cyclase A5904_06870 SM00671 Sel1-like repeats. A5904_06895 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A5904_06895 SM00267 diguanylate cyclase A5904_06955 SM00840 A5904_06955 A5904_06960 SM00316 Ribosomal protein S1-like RNA-binding domain A5904_06965 SM00363 S4 RNA-binding domain A5904_06980 SM00382 ATPases associated with a variety of cellular activities A5904_07030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A5904_07035 SM00260 Two component signalling adaptor domain A5904_07035 SM00448 cheY-homologous receiver domain A5904_07040 SM00849 Metallo-beta-lactamase superfamily A5904_07050 SM00073 Histidine Phosphotransfer domain A5904_07050 SM00260 Two component signalling adaptor domain A5904_07050 SM00387 Histidine kinase-like ATPases A5904_07050 SM01231 A5904_07050 A5904_07060 SM00448 cheY-homologous receiver domain A5904_07100 SM00858 A5904_07100 A5904_07145 SM00047 Lysozyme subfamily 2 A5904_07195 SM00382 ATPases associated with a variety of cellular activities A5904_07200 SM00387 Histidine kinase-like ATPases A5904_07200 SM00388 His Kinase A (phosphoacceptor) domain A5904_07205 SM00382 ATPases associated with a variety of cellular activities A5904_07205 SM00448 cheY-homologous receiver domain A5904_07230 SM00382 ATPases associated with a variety of cellular activities A5904_07285 SM00382 ATPases associated with a variety of cellular activities A5904_07285 SM00962 SRP54-type protein, GTPase domain A5904_07305 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A5904_07305 SM00534 ATPase domain of DNA mismatch repair MUTS family A5904_07315 SM00479 A5904_07315 A5904_07325 SM00463 Small MutS-related domain A5904_07360 SM00116 Domain in cystathionine beta-synthase and other proteins. A5904_07360 SM01240 A5904_07360 A5904_07370 SM00100 Cyclic nucleotide-monophosphate binding domain A5904_07370 SM00419 helix_turn_helix, cAMP Regulatory protein A5904_07395 SM00100 Cyclic nucleotide-monophosphate binding domain A5904_07395 SM00419 helix_turn_helix, cAMP Regulatory protein A5904_07410 SM00478 endonuclease III A5904_07470 SM01133 A5904_07470 A5904_07550 SM00530 Helix-turn-helix XRE-family like proteins A5904_07555 SM00155 Phospholipase D. Active site motifs. A5904_07560 SM00267 diguanylate cyclase A5904_07565 SM00267 diguanylate cyclase A5904_07605 SM00052 Putative diguanylate phosphodiesterase A5904_07605 SM00267 diguanylate cyclase A5904_07745 SM00448 cheY-homologous receiver domain A5904_07745 SM00862 Transcriptional regulatory protein, C terminal A5904_07750 SM00387 Histidine kinase-like ATPases A5904_07750 SM00388 His Kinase A (phosphoacceptor) domain A5904_07780 SM00671 Sel1-like repeats. A5904_07805 SM00564 beta-propeller repeat A5904_07830 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5904_07880 SM00729 Elongator protein 3, MiaB family, Radical SAM A5904_08030 SM01126 A5904_08030 A5904_08035 SM01126 A5904_08035 A5904_08165 SM00670 Large family of predicted nucleotide-binding domains A5904_08210 SM00382 ATPases associated with a variety of cellular activities A5904_08215 SM00327 von Willebrand factor (vWF) type A domain A5904_08220 SM00530 Helix-turn-helix XRE-family like proteins A5904_08315 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A5904_08325 SM00382 ATPases associated with a variety of cellular activities A5904_08345 SM00849 Metallo-beta-lactamase superfamily A5904_08365 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A5904_08385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A5904_08385 SM00292 breast cancer carboxy-terminal domain A5904_08385 SM00532 Ligase N family A5904_08410 SM00478 endonuclease III A5904_08415 SM00363 S4 RNA-binding domain A5904_08465 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A5904_08490 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A5904_08490 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A5904_08490 SM00091 PAS domain A5904_08490 SM00387 Histidine kinase-like ATPases A5904_08490 SM00388 His Kinase A (phosphoacceptor) domain A5904_08490 SM00448 cheY-homologous receiver domain A5904_08495 SM00481 DNA polymerase alpha chain like domain A5904_08530 SM00422 helix_turn_helix, mercury resistance A5904_08570 SM00904 Riboflavin kinase A5904_08600 SM00382 ATPases associated with a variety of cellular activities A5904_08615 SM00646 A5904_08615 A5904_08630 SM00450 Rhodanese Homology Domain A5904_08655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5904_08705 SM00382 ATPases associated with a variety of cellular activities A5904_08740 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A5904_08740 SM00534 ATPase domain of DNA mismatch repair MUTS family A5904_08780 SM00965 Secretin and TonB N terminus short domain A5904_08800 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A5904_08820 SM00563 Phosphate acyltransferases A5904_08830 SM00788 Adenylosuccinate synthetase A5904_08840 SM00244 prohibitin homologues A5904_08845 SM00244 prohibitin homologues A5904_08975 SM00347 helix_turn_helix multiple antibiotic resistance protein A5904_08980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5904_09070 SM00507 HNH nucleases A5904_09110 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A5904_09110 SM00465 GIY-YIG type nucleases (URI domain) A5904_09120 SM00841 Elongation factor P, C-terminal A5904_09120 SM01185 A5904_09120 A5904_09135 SM01192 A5904_09135 A5904_09135 SM01193 A5904_09135 A5904_09150 SM00487 DEAD-like helicases superfamily A5904_09150 SM00490 helicase superfamily c-terminal domain A5904_09205 SM00382 ATPases associated with a variety of cellular activities A5904_09340 SM00487 DEAD-like helicases superfamily A5904_09340 SM00490 helicase superfamily c-terminal domain A5904_09355 SM00938 Nitrogen regulatory protein P-II A5904_09375 SM00938 Nitrogen regulatory protein P-II A5904_09385 SM01230 A5904_09385 A5904_09390 SM01230 A5904_09390 A5904_09400 SM00382 ATPases associated with a variety of cellular activities A5904_09400 SM00448 cheY-homologous receiver domain A5904_09405 SM00091 PAS domain A5904_09405 SM00387 Histidine kinase-like ATPases A5904_09405 SM00388 His Kinase A (phosphoacceptor) domain A5904_09555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5904_09565 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5904_09590 SM00849 Metallo-beta-lactamase superfamily A5904_09595 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5904_09630 SM00100 Cyclic nucleotide-monophosphate binding domain A5904_09630 SM00419 helix_turn_helix, cAMP Regulatory protein A5904_09645 SM00100 Cyclic nucleotide-monophosphate binding domain A5904_09645 SM00419 helix_turn_helix, cAMP Regulatory protein A5904_09685 SM00478 endonuclease III A5904_09720 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5904_09755 SM01353 A5904_09755 A5904_09840 SM00849 Metallo-beta-lactamase superfamily A5904_09850 SM00967 RNA 2'-O ribose methyltransferase substrate binding A5904_09865 SM00481 DNA polymerase alpha chain like domain A5904_09890 SM00487 DEAD-like helicases superfamily A5904_09890 SM00490 helicase superfamily c-terminal domain A5904_09905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A5904_09905 SM00954 Region found in RelA / SpoT proteins A5904_09910 SM01409 A5904_09910 A5904_09915 SM00072 Guanylate kinase homologues. A5904_09950 SM00267 diguanylate cyclase A5904_10045 SM00885 D5 N terminal like A5904_10145 SM00880 A5904_10145 A5904_10145 SM01118 A5904_10145 A5904_10165 SM00382 ATPases associated with a variety of cellular activities A5904_10165 SM01086 C-terminal, D2-small domain, of ClpB protein A5904_10185 SM00861 Transketolase, pyrimidine binding domain A5904_10210 SM01323 A5904_10210 A5904_10225 SM01091 Transporter associated domain A5904_10285 SM00859 Semialdehyde dehydrogenase, NAD binding domain A5904_10290 SM01329 A5904_10290 A5904_10310 SM00852 Probable molybdopterin binding domain A5904_10315 SM00155 Phospholipase D. Active site motifs. A5904_10385 SM00382 ATPases associated with a variety of cellular activities A5904_10420 SM01211 A5904_10420 A5904_10430 SM00998 Adenylosuccinate lyase C-terminus A5904_10440 SM01130 A5904_10440 A5904_10450 SM00883 Chaperonin 10 Kd subunit A5904_10565 SM00845 GatB domain A5904_10615 SM00729 Elongator protein 3, MiaB family, Radical SAM A5904_10650 SM01126 A5904_10650 A5904_10655 SM01126 A5904_10655 A5904_10700 SM00382 ATPases associated with a variety of cellular activities A5904_10715 SM00642 Alpha-amylase domain A5904_10770 SM00400 zinc finger A5904_10770 SM00493 A5904_10770 A5904_10775 SM00463 Small MutS-related domain A5904_10775 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A5904_10775 SM00534 ATPase domain of DNA mismatch repair MUTS family A5904_10810 SM00387 Histidine kinase-like ATPases A5904_10825 SM00671 Sel1-like repeats. A5904_10855 SM00382 ATPases associated with a variety of cellular activities A5904_10860 SM00849 Metallo-beta-lactamase superfamily A5904_10920 SM00984 UDP binding domain A5904_10945 SM00358 Double-stranded RNA binding motif A5904_10945 SM00535 Ribonuclease III family A5904_10960 SM00838 Elongation factor G C-terminus A5904_10965 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A5904_10995 SM00382 ATPases associated with a variety of cellular activities A5904_11000 SM00382 ATPases associated with a variety of cellular activities A5904_11005 SM00897 FIST N domain A5904_11005 SM01204 A5904_11005 A5904_11030 SM00487 DEAD-like helicases superfamily A5904_11030 SM00491 A5904_11030 A5904_11110 SM00327 von Willebrand factor (vWF) type A domain A5904_11150 SM00729 Elongator protein 3, MiaB family, Radical SAM A5904_11165 SM00729 Elongator protein 3, MiaB family, Radical SAM A5904_11225 SM00450 Rhodanese Homology Domain A5904_11230 SM00729 Elongator protein 3, MiaB family, Radical SAM A5904_11250 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5904_11270 SM00387 Histidine kinase-like ATPases A5904_11270 SM00388 His Kinase A (phosphoacceptor) domain A5904_11275 SM00382 ATPases associated with a variety of cellular activities A5904_11275 SM00448 cheY-homologous receiver domain A5904_11335 SM00936 Penicillin-binding protein 5, C-terminal domain A5904_11350 SM00729 Elongator protein 3, MiaB family, Radical SAM A5904_11390 SM00960 Roadblock/LC7 domain A5904_11410 SM00563 Phosphate acyltransferases A5904_11460 SM00644 A5904_11460 A5904_11475 SM00917 LeuA allosteric (dimerisation) domain A5904_11535 SM00861 Transketolase, pyrimidine binding domain A5904_11540 SM00346 helix_turn_helix isocitrate lyase regulation A5904_11565 SM00091 PAS domain A5904_11565 SM00382 ATPases associated with a variety of cellular activities A5904_11605 SM01007 Class II Aldolase and Adducin N-terminal domain A5904_11630 SM00363 S4 RNA-binding domain A5904_11640 SM00938 Nitrogen regulatory protein P-II A5904_11650 SM00881 CoA binding domain A5904_11665 SM01329 A5904_11665 A5904_11685 SM00257 Lysin motif A5904_11740 SM00479 A5904_11740 A5904_11755 SM00849 Metallo-beta-lactamase superfamily A5904_11765 SM00316 Ribosomal protein S1-like RNA-binding domain A5904_11765 SM00322 K homology RNA-binding domain A5904_11770 SM01387 A5904_11770 A5904_11790 SM00316 Ribosomal protein S1-like RNA-binding domain A5904_11790 SM00322 K homology RNA-binding domain A5904_11875 SM00382 ATPases associated with a variety of cellular activities A5904_11905 SM00382 ATPases associated with a variety of cellular activities A5904_11920 SM00843 A5904_11920 A5904_11930 SM00463 Small MutS-related domain A5904_11935 SM00422 helix_turn_helix, mercury resistance A5904_11955 SM00487 DEAD-like helicases superfamily A5904_11955 SM00490 helicase superfamily c-terminal domain A5904_11955 SM00982 A5904_11955 A5904_11955 SM01058 CarD-like/TRCF domain A5904_12045 SM00271 DnaJ molecular chaperone homology domain A5904_12130 SM00422 helix_turn_helix, mercury resistance A5904_12185 SM00382 ATPases associated with a variety of cellular activities A5904_12240 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A5904_12245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5904_12245 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A5904_12295 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A5904_12320 SM00873 B3/4 domain A5904_12320 SM00874 tRNA synthetase B5 domain A5904_12320 SM00896 Ferredoxin-fold anticodon binding domain A5904_12325 SM00411 bacterial (prokaryotic) histone like domain A5904_12330 SM00422 helix_turn_helix, mercury resistance A5904_12340 SM00382 ATPases associated with a variety of cellular activities A5904_12395 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A5904_12400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5904_12400 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A5904_12455 SM00855 Phosphoglycerate mutase family A5904_12490 SM01126 A5904_12490 A5904_12495 SM01126 A5904_12495 A5904_12530 SM01001 AIR carboxylase A5904_12540 SM00100 Cyclic nucleotide-monophosphate binding domain A5904_12540 SM00419 helix_turn_helix, cAMP Regulatory protein A5904_12545 SM00849 Metallo-beta-lactamase superfamily A5904_12570 SM00382 ATPases associated with a variety of cellular activities A5904_12590 SM01152 A5904_12590 A5904_12595 SM00729 Elongator protein 3, MiaB family, Radical SAM A5904_12595 SM00876 Biotin and Thiamin Synthesis associated domain A5904_12645 SM00479 A5904_12645 A5904_12780 SM00957 SecA DEAD-like domain A5904_12780 SM00958 SecA preprotein cross-linking domain A5904_12885 SM00842 Cell division protein FtsA A5904_12890 SM00864 Tubulin/FtsZ family, GTPase domain A5904_12890 SM00865 Tubulin/FtsZ family, C-terminal domain A5904_12910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A5904_12910 SM00245 tail specific protease A5904_12930 SM00382 ATPases associated with a variety of cellular activities A5904_12930 SM01086 C-terminal, D2-small domain, of ClpB protein A5904_13015 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A5904_13060 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A5904_13115 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A5904_13115 SM00474 3'-5' exonuclease A5904_13115 SM00475 5'-3' exonuclease A5904_13115 SM00482 DNA polymerase A domain A5904_13150 SM00831 Cation transporter/ATPase, N-terminus A5904_13175 SM00382 ATPases associated with a variety of cellular activities A5904_13300 SM00240 Forkhead associated domain A5904_13310 SM00858 A5904_13310 A5904_13415 SM00729 Elongator protein 3, MiaB family, Radical SAM A5904_13435 SM00729 Elongator protein 3, MiaB family, Radical SAM A5904_13445 SM00905 Dihydroneopterin aldolase A5904_13450 SM01207 A5904_13450 A5904_13455 SM00028 Tetratricopeptide repeats A5904_13560 SM00834 Putative regulatory protein A5904_13580 SM00563 Phosphate acyltransferases A5904_13595 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A5904_13600 SM00382 ATPases associated with a variety of cellular activities A5904_13660 SM01004 Delta-aminolevulinic acid dehydratase A5904_13705 SM00316 Ribosomal protein S1-like RNA-binding domain A5904_13770 SM01234 A5904_13770 A5904_13785 SM00382 ATPases associated with a variety of cellular activities A5904_13810 SM00382 ATPases associated with a variety of cellular activities A5904_13815 SM00363 S4 RNA-binding domain A5904_13825 SM00507 HNH nucleases A5904_13830 SM00650 Ribosomal RNA adenine dimethylases A5904_13845 SM00836 DALR anticodon binding domain A5904_13845 SM01016 Arginyl tRNA synthetase N terminal dom A5904_13915 SM00382 ATPases associated with a variety of cellular activities A5904_13920 SM00387 Histidine kinase-like ATPases A5904_13920 SM00388 His Kinase A (phosphoacceptor) domain A5904_13925 SM00382 ATPases associated with a variety of cellular activities A5904_13925 SM00448 cheY-homologous receiver domain A5904_13980 SM00878 Biotin carboxylase C-terminal domain A5904_14040 SM00822 A5904_14040 A5904_14190 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A5904_14200 SM01092 CO dehydrogenase flavoprotein C-terminal domain A5904_14295 SM00411 bacterial (prokaryotic) histone like domain A5904_14305 SM00411 bacterial (prokaryotic) histone like domain A5904_14315 SM00411 bacterial (prokaryotic) histone like domain A5904_14330 SM00986 Uracil DNA glycosylase superfamily A5904_14330 SM00987 UreE urease accessory protein, C-terminal domain A5904_14400 SM00487 DEAD-like helicases superfamily A5904_14400 SM00490 helicase superfamily c-terminal domain A5904_14450 SM00382 ATPases associated with a variety of cellular activities A5904_14465 SM00382 ATPases associated with a variety of cellular activities A5904_14500 SM00257 Lysin motif A5904_14560 SM00532 Ligase N family A5904_14575 SM00507 HNH nucleases A5904_14600 SM00387 Histidine kinase-like ATPases A5904_14600 SM00433 TopoisomeraseII A5904_14610 SM00434 DNA Topoisomerase IV A5904_14680 SM00945 ProQ/FINO family A5904_14760 SM00487 DEAD-like helicases superfamily A5904_14760 SM00490 helicase superfamily c-terminal domain A5904_14765 SM00487 DEAD-like helicases superfamily A5904_14765 SM00490 helicase superfamily c-terminal domain A5904_14820 SM00411 bacterial (prokaryotic) histone like domain A5904_14870 SM00382 ATPases associated with a variety of cellular activities A5904_15050 SM00382 ATPases associated with a variety of cellular activities A5904_15110 SM00470 ParB-like nuclease domain A5904_15135 SM00530 Helix-turn-helix XRE-family like proteins A5904_15220 SM00411 bacterial (prokaryotic) histone like domain A5904_15235 SM00966 SpoVT / AbrB like domain A5904_15410 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5904_15410 SM00866 A5904_15410 A5904_15415 SM00857 Resolvase, N terminal domain A5904_15430 SM00966 SpoVT / AbrB like domain