Atc_0001 PF00308 Bacterial dnaA protein Atc_0001 PF08299 Bacterial dnaA protein helix-turn-helix Atc_0001 PF11638 DnaA N-terminal domain Atc_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Atc_0002 PF02767 DNA polymerase III beta subunit, central domain Atc_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Atc_0003 PF13476 AAA domain Atc_0004 PF00204 DNA gyrase B Atc_0004 PF00986 DNA gyrase B subunit, carboxyl terminus Atc_0004 PF01751 Toprim domain Atc_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_0005 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_0006 PF03776 Septum formation topological specificity factor MinE Atc_0007 PF13614 AAA domain Atc_0008 PF03775 Septum formation inhibitor MinC, C-terminal domain Atc_0008 PF05209 Septum formation inhibitor MinC, N-terminal domain Atc_0009 PF00037 4Fe-4S binding domain Atc_0009 PF11953 Domain of unknown function (DUF3470) Atc_0010 PF01131 DNA topoisomerase Atc_0010 PF01396 Atc_0010 Atc_0010 PF01751 Toprim domain Atc_0011 PF04361 Atc_0011 Atc_0012 PF02481 DNA recombination-mediator protein A Atc_0013 PF01327 Polypeptide deformylase Atc_0014 PF01476 LysM domain Atc_0015 PF00551 Formyl transferase Atc_0015 PF02911 Formyl transferase, C-terminal domain Atc_0016 PF01029 NusB family Atc_0016 PF01189 NOL1/NOP2/sun family Atc_0017 PF00512 His Kinase A (phospho-acceptor) domain Atc_0017 PF00672 HAMP domain Atc_0017 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_0017 PF13188 PAS domain Atc_0018 PF00072 Response regulator receiver domain Atc_0018 PF00158 Sigma-54 interaction domain Atc_0018 PF02954 Bacterial regulatory protein, Fis family Atc_0019 PF00994 Probable molybdopterin binding domain Atc_0020 PF03848 Tellurite resistance protein TehB Atc_0022 PF01134 Glucose inhibited division protein A Atc_0022 PF13932 GidA associated domain 3 Atc_0023 PF02527 rRNA small subunit methyltransferase G Atc_0024 PF13614 AAA domain Atc_0025 PF02195 ParB-like nuclease domain Atc_0027 PF00119 ATP synthase A chain Atc_0028 PF00137 ATP synthase subunit C Atc_0029 PF00430 ATP synthase B/B' CF(0) Atc_0030 PF00213 ATP synthase delta (OSCP) subunit Atc_0031 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atc_0031 PF00306 ATP synthase alpha/beta chain, C terminal domain Atc_0031 PF02874 ATP synthase alpha/beta family, beta-barrel domain Atc_0032 PF00231 ATP synthase Atc_0033 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atc_0033 PF02874 ATP synthase alpha/beta family, beta-barrel domain Atc_0034 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Atc_0034 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Atc_0035 PF00132 Bacterial transferase hexapeptide (six repeats) Atc_0035 PF12804 MobA-like NTP transferase domain Atc_0035 PF14602 Hexapeptide repeat of succinyl-transferase Atc_0036 PF01380 SIS domain Atc_0036 PF13522 Glutamine amidotransferase domain Atc_0038 PF01695 IstB-like ATP binding protein Atc_0038 PF08483 Atc_0038 Atc_0039 PF00665 Integrase core domain Atc_0039 PF13936 Helix-turn-helix domain Atc_0040 PF01610 Atc_0040 Atc_0040 PF13542 Atc_0040 Atc_0040 PF14690 Atc_0040 Atc_0041 PF03537 Glycoside-hydrolase family GH114 Atc_0043 PF13429 Tetratricopeptide repeat Atc_0046 PF16963 Atc_0046 Atc_0048 PF00534 Glycosyl transferases group 1 Atc_0048 PF11997 Atc_0048 Atc_0049 PF16933 Atc_0049 Atc_0050 PF01370 NAD dependent epimerase/dehydratase family Atc_0052 PF04402 Protein of unknown function (DUF541) Atc_0053 PF00990 GGDEF domain Atc_0053 PF08668 HDOD domain Atc_0054 PF13591 MerR HTH family regulatory protein Atc_0055 PF00226 DnaJ domain Atc_0055 PF01556 DnaJ C terminal domain Atc_0056 PF00580 UvrD/REP helicase N-terminal domain Atc_0056 PF13361 UvrD-like helicase C-terminal domain Atc_0058 PF00512 His Kinase A (phospho-acceptor) domain Atc_0058 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_0059 PF00072 Response regulator receiver domain Atc_0059 PF00486 Transcriptional regulatory protein, C terminal Atc_0060 PF07813 LTXXQ motif family protein Atc_0061 PF02321 Outer membrane efflux protein Atc_0062 PF16576 Atc_0062 Atc_0063 PF00873 AcrB/AcrD/AcrF family Atc_0065 PF01741 Large-conductance mechanosensitive channel, MscL Atc_0066 PF02646 Atc_0066 Atc_0067 PF02401 LytB protein Atc_0068 PF04452 RNA methyltransferase Atc_0069 PF00459 Inositol monophosphatase family Atc_0070 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Atc_0071 PF00456 Transketolase, thiamine diphosphate binding domain Atc_0071 PF02779 Transketolase, pyrimidine binding domain Atc_0071 PF02780 Transketolase, C-terminal domain Atc_0072 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Atc_0072 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Atc_0073 PF00162 Phosphoglycerate kinase Atc_0074 PF00224 Pyruvate kinase, barrel domain Atc_0074 PF02887 Pyruvate kinase, alpha/beta domain Atc_0075 PF01116 Fructose-bisphosphate aldolase class-II Atc_0077 PF00834 Ribulose-phosphate 3 epimerase family Atc_0078 PF13419 Haloacid dehalogenase-like hydrolase Atc_0079 PF00425 chorismate binding enzyme Atc_0079 PF04715 Anthranilate synthase component I, N terminal region Atc_0080 PF00117 Glutamine amidotransferase class-I Atc_0081 PF00591 Glycosyl transferase family, a/b domain Atc_0081 PF02885 Glycosyl transferase family, helical bundle domain Atc_0082 PF00218 Indole-3-glycerol phosphate synthase Atc_0083 PF02566 OsmC-like protein Atc_0084 PF02082 Transcriptional regulator Atc_0085 PF03232 Atc_0085 Atc_0087 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Atc_0088 PF00005 ABC transporter Atc_0089 PF01061 Atc_0089 Atc_0091 PF13358 DDE superfamily endonuclease Atc_0091 PF13518 Helix-turn-helix domain Atc_0091 PF13592 Atc_0091 Atc_0092 PF02661 Fic/DOC family Atc_0092 PF13776 Atc_0092 Atc_0093 PF11855 Atc_0093 Atc_0094 PF13835 Atc_0094 Atc_0095 PF13555 P-loop containing region of AAA domain Atc_0095 PF13558 Putative exonuclease SbcCD, C subunit Atc_0096 PF09983 Atc_0096 Atc_0096 PF11795 Atc_0096 Atc_0097 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Atc_0098 PF05016 Plasmid stabilisation system protein Atc_0099 PF02195 ParB-like nuclease domain Atc_0100 PF13614 AAA domain Atc_0102 PF10502 Signal peptidase, peptidase S26 Atc_0105 PF00795 Carbon-nitrogen hydrolase Atc_0107 PF01609 Transposase DDE domain Atc_0107 PF05598 Atc_0107 Atc_0109 PF02635 DsrE/DsrF-like family Atc_0110 PF13515 Atc_0110 Atc_0111 PF09995 Atc_0111 Atc_0116 PF01464 Transglycosylase SLT domain Atc_0122 PF09335 Atc_0122 Atc_0126 PF00535 Glycosyl transferase family 2 Atc_0127 PF13231 Atc_0127 Atc_0128 PF01609 Transposase DDE domain Atc_0128 PF05598 Atc_0128 Atc_0131 PF01609 Transposase DDE domain Atc_0131 PF05598 Atc_0131 Atc_0133 PF01548 Atc_0133 Atc_0133 PF02371 Atc_0133 Atc_0134 PF02371 Atc_0134 Atc_0137 PF03814 Atc_0137 Atc_0138 PF00122 E1-E2 ATPase Atc_0138 PF00702 haloacid dehalogenase-like hydrolase Atc_0139 PF02669 Atc_0139 Atc_0140 PF07642 Atc_0140 Atc_0142 PF00696 Amino acid kinase family Atc_0146 PF03814 Atc_0146 Atc_0147 PF01609 Transposase DDE domain Atc_0147 PF05598 Atc_0147 Atc_0148 PF00072 Response regulator receiver domain Atc_0148 PF00486 Transcriptional regulatory protein, C terminal Atc_0149 PF02583 Metal-sensitive transcriptional repressor Atc_0152 PF00817 impB/mucB/samB family Atc_0152 PF11798 IMS family HHH motif Atc_0152 PF11799 impB/mucB/samB family C-terminal domain Atc_0154 PF01609 Transposase DDE domain Atc_0154 PF05598 Atc_0154 Atc_0155 PF00583 Acetyltransferase (GNAT) family Atc_0156 PF01965 DJ-1/PfpI family Atc_0157 PF04299 Putative FMN-binding domain Atc_0159 PF13561 Enoyl-(Acyl carrier protein) reductase Atc_0161 PF07080 Protein of unknown function (DUF1348) Atc_0162 PF04335 VirB8 protein Atc_0163 PF03524 Conjugal transfer protein Atc_0164 PF03524 Conjugal transfer protein Atc_0165 PF03743 Bacterial conjugation TrbI-like protein Atc_0167 PF02452 PemK-like protein Atc_0168 PF01131 DNA topoisomerase Atc_0168 PF01751 Toprim domain Atc_0169 PF01464 Transglycosylase SLT domain Atc_0170 PF02534 Type IV secretory system Conjugative DNA transfer Atc_0171 PF01609 Transposase DDE domain Atc_0171 PF05598 Atc_0171 Atc_0172 PF05598 Atc_0172 Atc_0172 PF13751 Atc_0172 Atc_0173 PF01610 Atc_0173 Atc_0173 PF13542 Atc_0173 Atc_0173 PF14690 Atc_0173 Atc_0175 PF01609 Transposase DDE domain Atc_0176 PF12760 Transposase zinc-ribbon domain Atc_0176 PF12762 Atc_0176 Atc_0177 PF05598 Atc_0177 Atc_0178 PF13091 PLD-like domain Atc_0180 PF00436 Single-strand binding protein family Atc_0181 PF01609 Transposase DDE domain Atc_0181 PF05598 Atc_0181 Atc_0182 PF11127 Protein of unknown function (DUF2892) Atc_0184 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Atc_0184 PF06481 COX Aromatic Rich Motif Atc_0185 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atc_0186 PF00510 Cytochrome c oxidase subunit III Atc_0189 PF01040 UbiA prenyltransferase family Atc_0190 PF01610 Atc_0190 Atc_0190 PF13542 Atc_0190 Atc_0190 PF14690 Atc_0190 Atc_0191 PF07238 PilZ domain Atc_0192 PF00563 EAL domain Atc_0192 PF00990 GGDEF domain Atc_0192 PF13426 PAS domain Atc_0193 PF00072 Response regulator receiver domain Atc_0195 PF01584 CheW-like domain Atc_0195 PF01627 Hpt domain Atc_0195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_0195 PF02895 Signal transducing histidine kinase, homodimeric domain Atc_0197 PF00753 Metallo-beta-lactamase superfamily Atc_0198 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atc_0198 PF13682 Chemoreceptor zinc-binding domain Atc_0199 PF00072 Response regulator receiver domain Atc_0199 PF01584 CheW-like domain Atc_0200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atc_0200 PF13426 PAS domain Atc_0200 PF13682 Chemoreceptor zinc-binding domain Atc_0201 PF00563 EAL domain Atc_0201 PF11563 Protoglobin Atc_0201 PF13185 GAF domain Atc_0202 PF00589 Phage integrase family Atc_0203 PF00665 Integrase core domain Atc_0204 PF01695 IstB-like ATP binding protein Atc_0205 PF04932 Atc_0205 Atc_0206 PF00483 Nucleotidyl transferase Atc_0206 PF01050 Mannose-6-phosphate isomerase Atc_0207 PF16363 Atc_0207 Atc_0208 PF16363 Atc_0208 Atc_0209 PF00534 Glycosyl transferases group 1 Atc_0209 PF13439 Glycosyltransferase Family 4 Atc_0210 PF00534 Glycosyl transferases group 1 Atc_0211 PF01610 Atc_0211 Atc_0211 PF13542 Atc_0211 Atc_0211 PF14690 Atc_0211 Atc_0213 PF01609 Transposase DDE domain Atc_0213 PF05598 Atc_0213 Atc_0215 PF05717 Atc_0215 Atc_0216 PF03050 Atc_0216 Atc_0216 PF13007 Atc_0216 Atc_0216 PF13817 Atc_0216 Atc_0219 PF00005 ABC transporter Atc_0220 PF01061 Atc_0220 Atc_0221 PF13412 Winged helix-turn-helix DNA-binding Atc_0222 PF00535 Glycosyl transferase family 2 Atc_0224 PF13440 Atc_0224 Atc_0224 PF14667 Polysaccharide biosynthesis C-terminal domain Atc_0225 PF02397 Atc_0225 Atc_0226 PF00381 PTS HPr component phosphorylation site Atc_0226 PF00391 PEP-utilising enzyme, mobile domain Atc_0226 PF02896 PEP-utilising enzyme, TIM barrel domain Atc_0226 PF03610 PTS system fructose IIA component Atc_0226 PF05524 PEP-utilising enzyme, N-terminal Atc_0227 PF02734 DAK2 domain Atc_0229 PF02733 Dak1 domain Atc_0232 PF00563 EAL domain Atc_0232 PF00990 GGDEF domain Atc_0232 PF13185 GAF domain Atc_0232 PF13426 PAS domain Atc_0233 PF13767 Atc_0233 Atc_0234 PF13481 AAA domain Atc_0234 PF13541 Subunit ChlI of Mg-chelatase Atc_0235 PF00842 Alanine racemase, C-terminal domain Atc_0235 PF01168 Alanine racemase, N-terminal domain Atc_0237 PF00772 DnaB-like helicase N terminal domain Atc_0237 PF03796 DnaB-like helicase C terminal domain Atc_0238 PF01281 Ribosomal protein L9, N-terminal domain Atc_0238 PF03948 Ribosomal protein L9, C-terminal domain Atc_0239 PF09991 Atc_0239 Atc_0240 PF01084 Ribosomal protein S18 Atc_0241 PF01250 Ribosomal protein S6 Atc_0242 PF00933 Glycosyl hydrolase family 3 N terminal domain Atc_0243 PF13520 Amino acid permease Atc_0244 PF03734 L,D-transpeptidase catalytic domain Atc_0245 PF05958 tRNA (Uracil-5-)-methyltransferase Atc_0246 PF07027 Atc_0246 Atc_0248 PF01988 Atc_0248 Atc_0249 PF00291 Pyridoxal-phosphate dependent enzyme Atc_0250 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Atc_0251 PF14235 Atc_0251 Atc_0252 PF01625 Peptide methionine sulfoxide reductase Atc_0253 PF01641 SelR domain Atc_0254 PF00563 EAL domain Atc_0254 PF00990 GGDEF domain Atc_0254 PF13185 GAF domain Atc_0255 PF13538 UvrD-like helicase C-terminal domain Atc_0255 PF13604 AAA domain Atc_0256 PF00580 UvrD/REP helicase N-terminal domain Atc_0256 PF12705 PD-(D/E)XK nuclease superfamily Atc_0256 PF13361 UvrD-like helicase C-terminal domain Atc_0257 PF04257 Exodeoxyribonuclease V, gamma subunit Atc_0258 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) Atc_0259 PF05114 Protein of unknown function (DUF692) Atc_0262 PF00072 Response regulator receiver domain Atc_0262 PF00158 Sigma-54 interaction domain Atc_0264 PF00512 His Kinase A (phospho-acceptor) domain Atc_0264 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_0265 PF01979 Amidohydrolase family Atc_0266 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Atc_0266 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Atc_0267 PF00156 Phosphoribosyl transferase domain Atc_0268 PF03652 Uncharacterised protein family (UPF0081) Atc_0269 PF02622 Uncharacterized ACR, COG1678 Atc_0270 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Atc_0270 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Atc_0271 PF08886 Glutamate-cysteine ligase Atc_0272 PF00285 Citrate synthase Atc_0273 PF01521 Iron-sulphur cluster biosynthesis Atc_0275 PF02421 Ferrous iron transport protein B Atc_0275 PF07664 Atc_0275 Atc_0275 PF07670 Nucleoside recognition Atc_0276 PF04023 FeoA domain Atc_0277 PF06146 Atc_0277 Atc_0278 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atc_0278 PF00364 Biotin-requiring enzyme Atc_0278 PF02817 e3 binding domain Atc_0278 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atc_0278 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_0279 PF02779 Transketolase, pyrimidine binding domain Atc_0279 PF02780 Transketolase, C-terminal domain Atc_0280 PF00676 Dehydrogenase E1 component Atc_0281 PF04250 Atc_0281 Atc_0282 PF00939 Sodium:sulfate symporter transmembrane region Atc_0282 PF02080 TrkA-C domain Atc_0282 PF03600 Citrate transporter Atc_0283 PF00072 Response regulator receiver domain Atc_0283 PF00486 Transcriptional regulatory protein, C terminal Atc_0284 PF00512 His Kinase A (phospho-acceptor) domain Atc_0284 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_0284 PF02702 Osmosensitive K+ channel His kinase sensor domain Atc_0284 PF13493 Domain of unknown function (DUF4118) Atc_0285 PF03814 Atc_0285 Atc_0286 PF00122 E1-E2 ATPase Atc_0286 PF00702 haloacid dehalogenase-like hydrolase Atc_0287 PF02669 Atc_0287 Atc_0288 PF13531 Bacterial extracellular solute-binding protein Atc_0289 PF00875 DNA photolyase Atc_0289 PF03441 FAD binding domain of DNA photolyase Atc_0290 PF16694 Atc_0290 Atc_0291 PF07690 Major Facilitator Superfamily Atc_0292 PF00892 EamA-like transporter family Atc_0294 PF04542 Sigma-70 region 2 Atc_0294 PF08281 Sigma-70, region 4 Atc_0295 PF03640 Atc_0295 Atc_0296 PF13531 Bacterial extracellular solute-binding protein Atc_0297 PF00009 Elongation factor Tu GTP binding domain Atc_0297 PF00679 Elongation factor G C-terminus Atc_0297 PF03144 Elongation factor Tu domain 2 Atc_0298 PF08241 Methyltransferase domain Atc_0299 PF04379 Protein of unknown function (DUF525) Atc_0300 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Atc_0300 PF06827 Zinc finger found in FPG and IleRS Atc_0300 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Atc_0301 PF00581 Rhodanese-like domain Atc_0302 PF00120 Glutamine synthetase, catalytic domain Atc_0302 PF03951 Glutamine synthetase, beta-Grasp domain Atc_0303 PF00120 Glutamine synthetase, catalytic domain Atc_0304 PF13511 Atc_0304 Atc_0305 PF01975 Survival protein SurE Atc_0306 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Atc_0307 PF00140 Sigma-70 factor, region 1 Atc_0307 PF04539 Sigma-70 region 3 Atc_0307 PF04542 Sigma-70 region 2 Atc_0307 PF04545 Sigma-70, region 4 Atc_0308 PF04430 Protein of unknown function (DUF498/DUF598) Atc_0309 PF00155 Aminotransferase class I and II Atc_0310 PF00742 Homoserine dehydrogenase Atc_0310 PF01842 ACT domain Atc_0310 PF03447 Homoserine dehydrogenase, NAD binding domain Atc_0311 PF00291 Pyridoxal-phosphate dependent enzyme Atc_0313 PF01368 DHH family Atc_0313 PF02272 DHHA1 domain Atc_0314 PF00472 RF-1 domain Atc_0314 PF03462 PCRF domain Atc_0315 PF00152 tRNA synthetases class II (D, K and N) Atc_0315 PF01336 OB-fold nucleic acid binding domain Atc_0316 PF02687 Atc_0316 Atc_0316 PF12704 MacB-like periplasmic core domain Atc_0317 PF00005 ABC transporter Atc_0318 PF09835 Atc_0318 Atc_0319 PF03772 Atc_0319 Atc_0320 PF01618 Atc_0320 Atc_0321 PF02472 Biopolymer transport protein ExbD/TolR Atc_0322 PF04028 Atc_0322 Atc_0324 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Atc_0325 PF03966 Trm112p-like protein Atc_0326 PF02348 Cytidylyltransferase Atc_0327 PF00719 Inorganic pyrophosphatase Atc_0329 PF00581 Rhodanese-like domain Atc_0330 PF00294 pfkB family carbohydrate kinase Atc_0332 PF00438 S-adenosylmethionine synthetase, N-terminal domain Atc_0332 PF02772 S-adenosylmethionine synthetase, central domain Atc_0332 PF02773 S-adenosylmethionine synthetase, C-terminal domain Atc_0334 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Atc_0334 PF05221 S-adenosyl-L-homocysteine hydrolase Atc_0335 PF02219 Methylenetetrahydrofolate reductase Atc_0336 PF00485 Phosphoribulokinase / Uridine kinase family Atc_0337 PF01145 SPFH domain / Band 7 family Atc_0337 PF16200 Atc_0337 Atc_0338 PF01957 NfeD-like C-terminal, partner-binding Atc_0339 PF00128 Alpha amylase, catalytic domain Atc_0339 PF02806 Alpha amylase, C-terminal all-beta domain Atc_0339 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Atc_0341 PF00083 Sugar (and other) transporter Atc_0342 PF02321 Outer membrane efflux protein Atc_0343 PF00873 AcrB/AcrD/AcrF family Atc_0344 PF16576 Atc_0344 Atc_0346 PF00902 Sec-independent protein translocase protein (TatC) Atc_0347 PF02416 mttA/Hcf106 family Atc_0348 PF02416 mttA/Hcf106 family Atc_0349 PF01502 Phosphoribosyl-AMP cyclohydrolase Atc_0349 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Atc_0350 PF00977 Histidine biosynthesis protein Atc_0351 PF00977 Histidine biosynthesis protein Atc_0352 PF00117 Glutamine amidotransferase class-I Atc_0353 PF00475 Imidazoleglycerol-phosphate dehydratase Atc_0354 PF00155 Aminotransferase class I and II Atc_0355 PF00815 Histidinol dehydrogenase Atc_0356 PF01634 ATP phosphoribosyltransferase Atc_0357 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Atc_0358 PF00462 Glutaredoxin Atc_0359 PF01722 BolA-like protein Atc_0360 PF01061 Atc_0360 Atc_0361 PF00639 PPIC-type PPIASE domain Atc_0361 PF09312 SurA N-terminal domain Atc_0361 PF13616 PPIC-type PPIASE domain Atc_0362 PF03968 OstA-like protein Atc_0362 PF04453 Organic solvent tolerance protein Atc_0363 PF01636 Phosphotransferase enzyme family Atc_0364 PF00483 Nucleotidyl transferase Atc_0367 PF00571 CBS domain Atc_0367 PF01380 SIS domain Atc_0369 PF06835 Lipopolysaccharide-assembly, LptC-related Atc_0370 PF03968 OstA-like protein Atc_0371 PF00005 ABC transporter Atc_0371 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atc_0372 PF00309 Atc_0372 Atc_0372 PF04552 Sigma-54, DNA binding domain Atc_0372 PF04963 Sigma-54 factor, core binding domain Atc_0373 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Atc_0374 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Atc_0375 PF02603 HPr Serine kinase N terminus Atc_0375 PF07475 HPr Serine kinase C-terminal domain Atc_0376 PF03668 Atc_0376 Atc_0377 PF03610 PTS system fructose IIA component Atc_0378 PF11839 Atc_0378 Atc_0379 PF03734 L,D-transpeptidase catalytic domain Atc_0380 PF10442 Atc_0380 Atc_0381 PF00633 Helix-hairpin-helix motif Atc_0381 PF00730 HhH-GPD superfamily base excision DNA repair protein Atc_0384 PF00534 Glycosyl transferases group 1 Atc_0384 PF08323 Starch synthase catalytic domain Atc_0386 PF16363 Atc_0386 Atc_0387 PF04321 RmlD substrate binding domain Atc_0389 PF12112 Protein of unknown function (DUF3579) Atc_0390 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Atc_0391 PF00483 Nucleotidyl transferase Atc_0392 PF00483 Nucleotidyl transferase Atc_0393 PF04367 Atc_0393 Atc_0394 PF00072 Response regulator receiver domain Atc_0394 PF00158 Sigma-54 interaction domain Atc_0394 PF02954 Bacterial regulatory protein, Fis family Atc_0396 PF00512 His Kinase A (phospho-acceptor) domain Atc_0396 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_0398 PF02463 RecF/RecN/SMC N terminal domain Atc_0399 PF01513 ATP-NAD kinase Atc_0400 PF00381 PTS HPr component phosphorylation site Atc_0401 PF00391 PEP-utilising enzyme, mobile domain Atc_0401 PF02896 PEP-utilising enzyme, TIM barrel domain Atc_0401 PF05524 PEP-utilising enzyme, N-terminal Atc_0403 PF00730 HhH-GPD superfamily base excision DNA repair protein Atc_0403 PF14815 NUDIX domain Atc_0404 PF04362 Bacterial Fe(2+) trafficking Atc_0407 PF08897 Atc_0407 Atc_0408 PF01432 Peptidase family M3 Atc_0408 PF08439 Oligopeptidase F Atc_0409 PF00206 Lyase Atc_0409 PF10415 Fumarase C C-terminus Atc_0410 PF00793 DAHP synthetase I family Atc_0411 PF05656 Atc_0411 Atc_0412 PF01588 Putative tRNA binding domain Atc_0412 PF09334 tRNA synthetases class I (M) Atc_0413 PF00557 Metallopeptidase family M24 Atc_0413 PF05195 Aminopeptidase P, N-terminal domain Atc_0416 PF03309 Type III pantothenate kinase Atc_0417 PF03099 Biotin/lipoate A/B protein ligase family Atc_0418 PF00171 Aldehyde dehydrogenase family Atc_0419 PF06144 DNA polymerase III, delta subunit Atc_0419 PF14840 Processivity clamp loader gamma complex DNA pol III C-term Atc_0420 PF04390 Lipopolysaccharide-assembly Atc_0421 PF00133 tRNA synthetases class I (I, L, M and V) Atc_0421 PF08264 Anticodon-binding domain of tRNA Atc_0421 PF13603 Leucyl-tRNA synthetase, Domain 2 Atc_0422 PF01985 CRS1 / YhbY (CRM) domain Atc_0423 PF01728 FtsJ-like methyltransferase Atc_0425 PF01609 Transposase DDE domain Atc_0425 PF05598 Atc_0425 Atc_0426 PF00589 Phage integrase family Atc_0428 PF09903 Atc_0428 Atc_0429 PF10544 Atc_0429 Atc_0432 PF01850 PIN domain Atc_0433 PF04014 Antidote-toxin recognition MazE Atc_0436 PF01850 PIN domain Atc_0438 PF00665 Integrase core domain Atc_0439 PF00999 Sodium/hydrogen exchanger family Atc_0442 PF01118 Semialdehyde dehydrogenase, NAD binding domain Atc_0442 PF02774 Semialdehyde dehydrogenase, dimerisation domain Atc_0443 PF00380 Ribosomal protein S9/S16 Atc_0444 PF00572 Ribosomal protein L13 Atc_0446 PF02322 Atc_0446 Atc_0447 PF01654 Atc_0447 Atc_0449 PF00342 Phosphoglucose isomerase Atc_0450 PF00768 D-alanyl-D-alanine carboxypeptidase Atc_0450 PF07943 Penicillin-binding protein 5, C-terminal domain Atc_0451 PF00905 Penicillin binding protein transpeptidase domain Atc_0451 PF00912 Transglycosylase Atc_0451 PF17092 Atc_0451 Atc_0453 PF00873 AcrB/AcrD/AcrF family Atc_0454 PF16576 Atc_0454 Atc_0455 PF02321 Outer membrane efflux protein Atc_0456 PF00512 His Kinase A (phospho-acceptor) domain Atc_0456 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_0457 PF00072 Response regulator receiver domain Atc_0457 PF00486 Transcriptional regulatory protein, C terminal Atc_0458 PF03413 Peptidase propeptide and YPEB domain Atc_0459 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Atc_0459 PF14572 Phosphoribosyl synthetase-associated domain Atc_0461 PF00288 GHMP kinases N terminal domain Atc_0461 PF08544 GHMP kinases C terminal Atc_0462 PF03550 Outer membrane lipoprotein LolB Atc_0463 PF13432 Tetratricopeptide repeat Atc_0464 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Atc_0464 PF01488 Shikimate / quinate 5-dehydrogenase Atc_0464 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Atc_0466 PF00472 RF-1 domain Atc_0466 PF03462 PCRF domain Atc_0467 PF05175 Methyltransferase small domain Atc_0468 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Atc_0468 PF06827 Zinc finger found in FPG and IleRS Atc_0468 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Atc_0469 PF00350 Dynamin family Atc_0471 PF01467 Cytidylyltransferase Atc_0472 PF03602 Conserved hypothetical protein 95 Atc_0473 PF00448 SRP54-type protein, GTPase domain Atc_0473 PF02881 SRP54-type protein, helical bundle domain Atc_0474 PF00005 ABC transporter Atc_0476 PF04542 Sigma-70 region 2 Atc_0476 PF04545 Sigma-70, region 4 Atc_0477 PF02635 DsrE/DsrF-like family Atc_0478 PF00924 Mechanosensitive ion channel Atc_0479 PF00004 ATPase family associated with various cellular activities (AAA) Atc_0479 PF07724 AAA domain (Cdc48 subfamily) Atc_0479 PF10431 C-terminal, D2-small domain, of ClpB protein Atc_0480 PF00227 Proteasome subunit Atc_0481 PF00589 Phage integrase family Atc_0481 PF02899 Phage integrase, N-terminal SAM-like domain Atc_0482 PF01678 Diaminopimelate epimerase Atc_0483 PF04340 Protein of unknown function, DUF484 Atc_0484 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atc_0484 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Atc_0485 PF00106 short chain dehydrogenase Atc_0487 PF07396 Phosphate-selective porin O and P Atc_0488 PF07238 PilZ domain Atc_0489 PF01270 Glycosyl hydrolases family 8 Atc_0490 PF17036 Atc_0490 Atc_0491 PF03170 Bacterial cellulose synthase subunit Atc_0493 PF12760 Transposase zinc-ribbon domain Atc_0493 PF12762 Atc_0493 Atc_0494 PF01610 Atc_0494 Atc_0494 PF13542 Atc_0494 Atc_0494 PF14690 Atc_0494 Atc_0495 PF00535 Glycosyl transferase family 2 Atc_0496 PF01699 Sodium/calcium exchanger protein Atc_0498 PF00270 DEAD/DEAH box helicase Atc_0498 PF00271 Helicase conserved C-terminal domain Atc_0498 PF03880 DbpA RNA binding domain Atc_0499 PF00313 'Cold-shock' DNA-binding domain Atc_0500 PF13557 Atc_0500 Atc_0502 PF00665 Integrase core domain Atc_0507 PF01610 Atc_0507 Atc_0507 PF13542 Atc_0507 Atc_0507 PF14690 Atc_0507 Atc_0510 PF01610 Atc_0510 Atc_0510 PF13542 Atc_0510 Atc_0510 PF14690 Atc_0510 Atc_0512 PF03412 Peptidase C39 family Atc_0514 PF13174 Tetratricopeptide repeat Atc_0514 PF14559 Tetratricopeptide repeat Atc_0515 PF13646 HEAT repeats Atc_0516 PF00535 Glycosyl transferase family 2 Atc_0517 PF00158 Sigma-54 interaction domain Atc_0517 PF02954 Bacterial regulatory protein, Fis family Atc_0518 PF13358 DDE superfamily endonuclease Atc_0518 PF13518 Helix-turn-helix domain Atc_0518 PF13592 Atc_0518 Atc_0519 PF00270 DEAD/DEAH box helicase Atc_0519 PF00271 Helicase conserved C-terminal domain Atc_0520 PF01040 UbiA prenyltransferase family Atc_0521 PF04345 Chorismate lyase Atc_0522 PF01545 Cation efflux family Atc_0523 PF13649 Methyltransferase domain Atc_0524 PF00483 Nucleotidyl transferase Atc_0525 PF03065 Glycosyl hydrolase family 57 Atc_0526 PF03065 Glycosyl hydrolase family 57 Atc_0526 PF09094 Domain of unknown function (DUF1925) Atc_0526 PF09095 Domain of unknown function (DUF1926) Atc_0527 PF00480 ROK family Atc_0528 PF01177 Asp/Glu/Hydantoin racemase Atc_0530 PF04286 Atc_0530 Atc_0531 PF02696 Atc_0531 Atc_0532 PF00919 Uncharacterized protein family UPF0004 Atc_0532 PF01938 TRAM domain Atc_0532 PF04055 Radical SAM superfamily Atc_0533 PF02562 PhoH-like protein Atc_0534 PF02130 Uncharacterized protein family UPF0054 Atc_0535 PF00571 CBS domain Atc_0535 PF03471 Transporter associated domain Atc_0536 PF00795 Carbon-nitrogen hydrolase Atc_0538 PF00795 Carbon-nitrogen hydrolase Atc_0539 PF13098 Thioredoxin-like domain Atc_0541 PF05114 Protein of unknown function (DUF692) Atc_0543 PF13098 Thioredoxin-like domain Atc_0544 PF13098 Thioredoxin-like domain Atc_0545 PF02683 Atc_0545 Atc_0545 PF11412 Disulphide bond corrector protein DsbC Atc_0545 PF13899 Thioredoxin-like Atc_0547 PF02566 OsmC-like protein Atc_0548 PF02635 DsrE/DsrF-like family Atc_0549 PF07690 Major Facilitator Superfamily Atc_0550 PF12840 Helix-turn-helix domain Atc_0551 PF00753 Metallo-beta-lactamase superfamily Atc_0555 PF13847 Methyltransferase domain Atc_0556 PF09851 Atc_0556 Atc_0557 PF04399 Glutaredoxin 2, C terminal domain Atc_0557 PF13417 Glutathione S-transferase, N-terminal domain Atc_0558 PF01022 Bacterial regulatory protein, arsR family Atc_0559 PF03773 Atc_0559 Atc_0563 PF12732 Atc_0563 Atc_0564 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atc_0564 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atc_0564 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atc_0566 PF11583 P-aminobenzoate N-oxygenase AurF Atc_0567 PF00448 SRP54-type protein, GTPase domain Atc_0567 PF02881 SRP54-type protein, helical bundle domain Atc_0567 PF02978 Signal peptide binding domain Atc_0568 PF00886 Ribosomal protein S16 Atc_0569 PF01782 RimM N-terminal domain Atc_0569 PF05239 PRC-barrel domain Atc_0570 PF01746 tRNA (Guanine-1)-methyltransferase Atc_0571 PF01245 Ribosomal protein L19 Atc_0573 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Atc_0574 PF00589 Phage integrase family Atc_0574 PF02899 Phage integrase, N-terminal SAM-like domain Atc_0575 PF13180 PDZ domain Atc_0575 PF13365 Trypsin-like peptidase domain Atc_0576 PF00085 Thioredoxin Atc_0576 PF14559 Tetratricopeptide repeat Atc_0576 PF14561 Tetratricopeptide repeat Atc_0579 PF00464 Serine hydroxymethyltransferase Atc_0580 PF03477 ATP cone domain Atc_0581 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Atc_0581 PF01872 RibD C-terminal domain Atc_0582 PF00677 Lumazine binding domain Atc_0583 PF00925 GTP cyclohydrolase II Atc_0583 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Atc_0584 PF00885 6,7-dimethyl-8-ribityllumazine synthase Atc_0585 PF01029 NusB family Atc_0586 PF08238 Sel1 repeat Atc_0587 PF06305 Atc_0587 Atc_0588 PF03109 Atc_0588 Atc_0589 PF00691 OmpA family Atc_0590 PF00009 Elongation factor Tu GTP binding domain Atc_0590 PF03143 Elongation factor Tu C-terminal domain Atc_0590 PF03144 Elongation factor Tu domain 2 Atc_0592 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Atc_0593 PF00467 KOW motif Atc_0593 PF02357 Transcription termination factor nusG Atc_0594 PF00298 Ribosomal protein L11, RNA binding domain Atc_0594 PF03946 Ribosomal protein L11, N-terminal domain Atc_0595 PF00687 Ribosomal protein L1p/L10e family Atc_0596 PF00466 Ribosomal protein L10 Atc_0597 PF00542 Ribosomal protein L7/L12 C-terminal domain Atc_0597 PF16320 Atc_0597 Atc_0598 PF00562 RNA polymerase Rpb2, domain 6 Atc_0598 PF04560 RNA polymerase Rpb2, domain 7 Atc_0598 PF04561 RNA polymerase Rpb2, domain 2 Atc_0598 PF04563 RNA polymerase beta subunit Atc_0598 PF04565 RNA polymerase Rpb2, domain 3 Atc_0598 PF10385 RNA polymerase beta subunit external 1 domain Atc_0599 PF00623 RNA polymerase Rpb1, domain 2 Atc_0599 PF04983 RNA polymerase Rpb1, domain 3 Atc_0599 PF04997 RNA polymerase Rpb1, domain 1 Atc_0599 PF04998 RNA polymerase Rpb1, domain 5 Atc_0599 PF05000 RNA polymerase Rpb1, domain 4 Atc_0600 PF00164 Ribosomal protein S12/S23 Atc_0601 PF00177 Ribosomal protein S7p/S5e Atc_0602 PF00009 Elongation factor Tu GTP binding domain Atc_0602 PF00679 Elongation factor G C-terminus Atc_0602 PF03144 Elongation factor Tu domain 2 Atc_0602 PF03764 Elongation factor G, domain IV Atc_0602 PF14492 Elongation Factor G, domain II Atc_0603 PF00009 Elongation factor Tu GTP binding domain Atc_0603 PF03143 Elongation factor Tu C-terminal domain Atc_0603 PF03144 Elongation factor Tu domain 2 Atc_0604 PF00338 Ribosomal protein S10p/S20e Atc_0605 PF00297 Ribosomal protein L3 Atc_0606 PF00573 Ribosomal protein L4/L1 family Atc_0607 PF00276 Ribosomal protein L23 Atc_0608 PF00181 Ribosomal Proteins L2, RNA binding domain Atc_0608 PF03947 Ribosomal Proteins L2, C-terminal domain Atc_0609 PF00203 Ribosomal protein S19 Atc_0610 PF00237 Ribosomal protein L22p/L17e Atc_0611 PF00189 Ribosomal protein S3, C-terminal domain Atc_0611 PF07650 KH domain Atc_0612 PF00252 Ribosomal protein L16p/L10e Atc_0613 PF00831 Ribosomal L29 protein Atc_0614 PF00366 Ribosomal protein S17 Atc_0615 PF00238 Ribosomal protein L14p/L23e Atc_0616 PF00467 KOW motif Atc_0616 PF17136 Atc_0616 Atc_0617 PF00281 Ribosomal protein L5 Atc_0617 PF00673 ribosomal L5P family C-terminus Atc_0618 PF00253 Ribosomal protein S14p/S29e Atc_0619 PF00410 Ribosomal protein S8 Atc_0620 PF00861 Ribosomal L18p/L5e family Atc_0621 PF00333 Ribosomal protein S5, N-terminal domain Atc_0621 PF03719 Ribosomal protein S5, C-terminal domain Atc_0622 PF00327 Ribosomal protein L30p/L7e Atc_0623 PF00828 Ribosomal protein L18e/L15 Atc_0624 PF00344 SecY translocase Atc_0625 PF00406 Adenylate kinase Atc_0625 PF05191 Adenylate kinase, active site lid Atc_0626 PF01176 Translation initiation factor 1A / IF-1 Atc_0627 PF00444 Ribosomal protein L36 Atc_0628 PF00416 Ribosomal protein S13/S18 Atc_0629 PF00411 Ribosomal protein S11 Atc_0630 PF00163 Ribosomal protein S4/S9 N-terminal domain Atc_0630 PF01479 S4 domain Atc_0632 PF01000 RNA polymerase Rpb3/RpoA insert domain Atc_0632 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Atc_0632 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Atc_0633 PF01196 Ribosomal protein L17 Atc_0635 PF00436 Single-strand binding protein family Atc_0636 PF13495 Phage integrase, N-terminal SAM-like domain Atc_0637 PF02627 Carboxymuconolactone decarboxylase family Atc_0638 PF01523 Putative modulator of DNA gyrase Atc_0639 PF01743 Poly A polymerase head domain Atc_0639 PF12627 Probable RNA and SrmB- binding site of polymerase A Atc_0640 PF00330 Aconitase family (aconitate hydratase) Atc_0642 PF00694 Aconitase C-terminal domain Atc_0644 PF01243 Pyridoxamine 5'-phosphate oxidase Atc_0644 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Atc_0645 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Atc_0646 PF17124 Atc_0646 Atc_0647 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Atc_0647 PF06481 COX Aromatic Rich Motif Atc_0648 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atc_0649 PF00510 Cytochrome c oxidase subunit III Atc_0652 PF01040 UbiA prenyltransferase family Atc_0653 PF07690 Major Facilitator Superfamily Atc_0654 PF02673 Atc_0654 Atc_0655 PF01272 Transcription elongation factor, GreA/GreB, C-term Atc_0655 PF03449 Transcription elongation factor, N-terminal Atc_0656 PF02142 MGS-like domain Atc_0656 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atc_0656 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Atc_0658 PF00117 Glutamine amidotransferase class-I Atc_0658 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Atc_0660 PF11127 Protein of unknown function (DUF2892) Atc_0661 PF07642 Atc_0661 Atc_0662 PF13520 Amino acid permease Atc_0663 PF00348 Polyprenyl synthetase Atc_0664 PF00905 Penicillin binding protein transpeptidase domain Atc_0664 PF03717 Penicillin-binding Protein dimerisation domain Atc_0667 PF00005 ABC transporter Atc_0667 PF12848 ABC transporter Atc_0667 PF16326 Atc_0667 Atc_0668 PF09685 Atc_0668 Atc_0669 PF03167 Uracil DNA glycosylase superfamily Atc_0670 PF01370 NAD dependent epimerase/dehydratase family Atc_0672 PF00296 Luciferase-like monooxygenase Atc_0673 PF00929 Exonuclease Atc_0674 PF00072 Response regulator receiver domain Atc_0674 PF00486 Transcriptional regulatory protein, C terminal Atc_0675 PF00593 TonB dependent receptor Atc_0675 PF07715 TonB-dependent Receptor Plug Domain Atc_0676 PF03544 Gram-negative bacterial TonB protein C-terminal Atc_0677 PF04185 Phosphoesterase family Atc_0678 PF02472 Biopolymer transport protein ExbD/TolR Atc_0679 PF01618 Atc_0679 Atc_0680 PF00593 TonB dependent receptor Atc_0681 PF01610 Atc_0681 Atc_0681 PF13542 Atc_0681 Atc_0681 PF14690 Atc_0681 Atc_0682 PF07715 TonB-dependent Receptor Plug Domain Atc_0683 PF03843 Atc_0683 Atc_0685 PF00905 Penicillin binding protein transpeptidase domain Atc_0686 PF12092 Atc_0686 Atc_0687 PF00583 Acetyltransferase (GNAT) family Atc_0688 PF01180 Dihydroorotate dehydrogenase Atc_0689 PF01218 Coproporphyrinogen III oxidase Atc_0690 PF01300 Telomere recombination Atc_0691 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Atc_0691 PF02843 Phosphoribosylglycinamide synthetase, C domain Atc_0691 PF02844 Phosphoribosylglycinamide synthetase, N domain Atc_0692 PF01808 AICARFT/IMPCHase bienzyme Atc_0692 PF02142 MGS-like domain Atc_0693 PF00465 Iron-containing alcohol dehydrogenase Atc_0694 PF01926 50S ribosome-binding GTPase Atc_0694 PF06071 Protein of unknown function (DUF933) Atc_0695 PF01195 Peptidyl-tRNA hydrolase Atc_0696 PF01386 Ribosomal L25p family Atc_0696 PF14693 Ribosomal protein TL5, C-terminal domain Atc_0697 PF00905 Penicillin binding protein transpeptidase domain Atc_0697 PF03717 Penicillin-binding Protein dimerisation domain Atc_0699 PF05164 Cell division protein ZapA Atc_0700 PF01812 5-formyltetrahydrofolate cyclo-ligase family Atc_0701 PF13277 YmdB-like protein Atc_0702 PF05299 M61 glycyl aminopeptidase Atc_0702 PF13180 PDZ domain Atc_0703 PF00857 Isochorismatase family Atc_0704 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Atc_0705 PF02470 Atc_0705 Atc_0706 PF03886 Protein of unknown function (DUF330) Atc_0707 PF00873 AcrB/AcrD/AcrF family Atc_0708 PF13437 HlyD family secretion protein Atc_0709 PF02321 Outer membrane efflux protein Atc_0710 PF04014 Antidote-toxin recognition MazE Atc_0711 PF00582 Universal stress protein family Atc_0712 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atc_0712 PF03129 Anticodon binding domain Atc_0712 PF04073 Aminoacyl-tRNA editing domain Atc_0713 PF00582 Universal stress protein family Atc_0714 PF01925 Atc_0714 Atc_0715 PF09608 Atc_0715 Atc_0716 PF02322 Atc_0716 Atc_0717 PF01654 Atc_0717 Atc_0719 PF13520 Amino acid permease Atc_0720 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Atc_0720 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Atc_0721 PF00133 tRNA synthetases class I (I, L, M and V) Atc_0721 PF08264 Anticodon-binding domain of tRNA Atc_0721 PF10458 Valyl tRNA synthetase tRNA binding arm Atc_0723 PF04364 DNA polymerase III chi subunit, HolC Atc_0724 PF00883 Cytosol aminopeptidase family, catalytic domain Atc_0724 PF02789 Cytosol aminopeptidase family, N-terminal domain Atc_0726 PF03739 Atc_0726 Atc_0727 PF03739 Atc_0727 Atc_0728 PF00350 Dynamin family Atc_0730 PF04399 Glutaredoxin 2, C terminal domain Atc_0731 PF01878 EVE domain Atc_0732 PF01491 Frataxin-like domain Atc_0733 PF00270 DEAD/DEAH box helicase Atc_0733 PF00271 Helicase conserved C-terminal domain Atc_0733 PF00570 HRDC domain Atc_0733 PF09382 RQC domain Atc_0733 PF16124 Atc_0733 Atc_0735 PF00149 Calcineurin-like phosphoesterase Atc_0736 PF02635 DsrE/DsrF-like family Atc_0737 PF02556 Preprotein translocase subunit SecB Atc_0738 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Atc_0738 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Atc_0739 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_0740 PF00072 Response regulator receiver domain Atc_0740 PF00158 Sigma-54 interaction domain Atc_0740 PF02954 Bacterial regulatory protein, Fis family Atc_0741 PF00589 Phage integrase family Atc_0742 PF03175 DNA polymerase type B, organellar and viral Atc_0746 PF02661 Fic/DOC family Atc_0748 PF07804 HipA-like C-terminal domain Atc_0748 PF13657 HipA N-terminal domain Atc_0757 PF00665 Integrase core domain Atc_0757 PF13565 Atc_0757 Atc_0758 PF13401 AAA domain Atc_0761 PF01592 NifU-like N terminal domain Atc_0764 PF07804 HipA-like C-terminal domain Atc_0764 PF13657 HipA N-terminal domain Atc_0765 PF13560 Helix-turn-helix domain Atc_0767 PF07238 PilZ domain Atc_0767 PF13412 Winged helix-turn-helix DNA-binding Atc_0769 PF00535 Glycosyl transferase family 2 Atc_0769 PF13440 Atc_0769 Atc_0770 PF01061 Atc_0770 Atc_0771 PF01609 Transposase DDE domain Atc_0771 PF05598 Atc_0771 Atc_0773 PF01609 Transposase DDE domain Atc_0773 PF05598 Atc_0773 Atc_0776 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Atc_0776 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Atc_0777 PF01610 Atc_0777 Atc_0777 PF13542 Atc_0777 Atc_0777 PF14690 Atc_0777 Atc_0778 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Atc_0780 PF05717 Atc_0780 Atc_0781 PF00534 Glycosyl transferases group 1 Atc_0781 PF00535 Glycosyl transferase family 2 Atc_0781 PF13578 Methyltransferase domain Atc_0781 PF13641 Glycosyltransferase like family 2 Atc_0782 PF00733 Asparagine synthase Atc_0782 PF13537 Glutamine amidotransferase domain Atc_0783 PF01609 Transposase DDE domain Atc_0783 PF05598 Atc_0783 Atc_0784 PF02397 Atc_0784 Atc_0785 PF04932 Atc_0785 Atc_0787 PF00158 Sigma-54 interaction domain Atc_0787 PF00989 PAS fold Atc_0787 PF02954 Bacterial regulatory protein, Fis family Atc_0790 PF01609 Transposase DDE domain Atc_0790 PF05598 Atc_0790 Atc_0793 PF00873 AcrB/AcrD/AcrF family Atc_0794 PF00873 AcrB/AcrD/AcrF family Atc_0795 PF16576 Atc_0795 Atc_0801 PF00753 Metallo-beta-lactamase superfamily Atc_0801 PF07521 RNA-metabolising metallo-beta-lactamase Atc_0801 PF10996 Beta-Casp domain Atc_0802 PF01649 Ribosomal protein S20 Atc_0803 PF00580 UvrD/REP helicase N-terminal domain Atc_0803 PF13361 UvrD-like helicase C-terminal domain Atc_0804 PF01790 Atc_0804 Atc_0805 PF00849 RNA pseudouridylate synthase Atc_0805 PF01479 S4 domain Atc_0806 PF04371 Porphyromonas-type peptidyl-arginine deiminase Atc_0807 PF00293 NUDIX domain Atc_0808 PF00293 NUDIX domain Atc_0809 PF07769 Atc_0809 Atc_0810 PF07690 Major Facilitator Superfamily Atc_0811 PF00085 Thioredoxin Atc_0812 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atc_0812 PF07497 Rho termination factor, RNA-binding domain Atc_0812 PF07498 Rho termination factor, N-terminal domain Atc_0813 PF01197 Ribosomal protein L31 Atc_0814 PF00390 Malic enzyme, N-terminal domain Atc_0814 PF03949 Malic enzyme, NAD binding domain Atc_0816 PF00920 Dehydratase family Atc_0817 PF01936 NYN domain Atc_0818 PF00583 Acetyltransferase (GNAT) family Atc_0818 PF00696 Amino acid kinase family Atc_0819 PF01722 BolA-like protein Atc_0820 PF03795 YCII-related domain Atc_0821 PF04279 Atc_0821 Atc_0822 PF05673 Protein of unknown function (DUF815) Atc_0823 PF00459 Inositol monophosphatase family Atc_0824 PF00588 SpoU rRNA Methylase family Atc_0825 PF00132 Bacterial transferase hexapeptide (six repeats) Atc_0826 PF02082 Transcriptional regulator Atc_0827 PF00266 Aminotransferase class-V Atc_0828 PF01592 NifU-like N terminal domain Atc_0829 PF01521 Iron-sulphur cluster biosynthesis Atc_0830 PF07743 HSCB C-terminal oligomerisation domain Atc_0831 PF00012 Hsp70 protein Atc_0832 PF00111 2Fe-2S iron-sulfur cluster binding domain Atc_0833 PF04384 Iron-sulphur cluster assembly Atc_0834 PF03054 tRNA methyl transferase Atc_0835 PF00072 Response regulator receiver domain Atc_0835 PF00486 Transcriptional regulatory protein, C terminal Atc_0836 PF00512 His Kinase A (phospho-acceptor) domain Atc_0836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_0836 PF13188 PAS domain Atc_0837 PF00005 ABC transporter Atc_0838 PF01895 PhoU domain Atc_0839 PF02541 Ppx/GppA phosphatase family Atc_0840 PF09335 Atc_0840 Atc_0841 PF00318 Ribosomal protein S2 Atc_0842 PF00889 Elongation factor TS Atc_0843 PF00696 Amino acid kinase family Atc_0844 PF01765 Ribosome recycling factor Atc_0845 PF01255 Putative undecaprenyl diphosphate synthase Atc_0846 PF01148 Cytidylyltransferase family Atc_0847 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Atc_0847 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal Atc_0847 PF13288 DXP reductoisomerase C-terminal domain Atc_0848 PF02163 Peptidase family M50 Atc_0848 PF13180 PDZ domain Atc_0849 PF01103 Surface antigen Atc_0849 PF07244 Surface antigen variable number repeat Atc_0850 PF03938 Outer membrane protein (OmpH-like) Atc_0851 PF00132 Bacterial transferase hexapeptide (six repeats) Atc_0851 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Atc_0852 PF07977 FabA-like domain Atc_0853 PF00132 Bacterial transferase hexapeptide (six repeats) Atc_0853 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Atc_0854 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atc_0855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Atc_0856 PF02684 Atc_0856 Atc_0857 PF01351 Ribonuclease HII Atc_0858 PF02811 PHP domain Atc_0858 PF07733 Bacterial DNA polymerase III alpha subunit Atc_0858 PF14579 Helix-hairpin-helix motif Atc_0859 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Atc_0860 PF01171 PP-loop family Atc_0860 PF11734 TilS substrate C-terminal domain Atc_0861 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Atc_0862 PF03321 GH3 auxin-responsive promoter Atc_0863 PF01804 Penicillin amidase Atc_0865 PF14373 Atc_0865 Atc_0866 PF08238 Sel1 repeat Atc_0869 PF00005 ABC transporter Atc_0869 PF00664 ABC transporter transmembrane region Atc_0870 PF00106 short chain dehydrogenase Atc_0871 PF12007 Protein of unknown function (DUF3501) Atc_0872 PF02754 Atc_0872 Atc_0874 PF02915 Rubrerythrin Atc_0877 PF02601 Atc_0877 Atc_0877 PF13742 Atc_0877 Atc_0878 PF00085 Thioredoxin Atc_0879 PF11911 Atc_0879 Atc_0881 PF03544 Gram-negative bacterial TonB protein C-terminal Atc_0882 PF03023 Atc_0882 Atc_0883 PF01464 Transglycosylase SLT domain Atc_0885 PF00950 Atc_0885 Atc_0886 PF00950 Atc_0886 Atc_0887 PF00005 ABC transporter Atc_0888 PF07690 Major Facilitator Superfamily Atc_0889 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Atc_0889 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atc_0889 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atc_0889 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atc_0891 PF07690 Major Facilitator Superfamily Atc_0892 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Atc_0893 PF01850 PIN domain Atc_0897 PF03203 Atc_0897 Atc_0898 PF01593 Flavin containing amine oxidoreductase Atc_0900 PF01610 Atc_0900 Atc_0900 PF13542 Atc_0900 Atc_0900 PF14690 Atc_0900 Atc_0901 PF01610 Atc_0901 Atc_0901 PF13542 Atc_0901 Atc_0901 PF14690 Atc_0901 Atc_0902 PF02635 DsrE/DsrF-like family Atc_0904 PF01609 Transposase DDE domain Atc_0904 PF05598 Atc_0904 Atc_0905 PF01011 PQQ enzyme repeat Atc_0905 PF13360 PQQ-like domain Atc_0905 PF13570 PQQ-like domain Atc_0906 PF02597 ThiS family Atc_0907 PF01343 Peptidase family S49 Atc_0907 PF08496 Atc_0907 Atc_0908 PF02391 MoaE protein Atc_0909 PF04461 Protein of unknown function (DUF520) Atc_0910 PF10615 Protein of unknown function (DUF2470) Atc_0910 PF13883 Pyridoxamine 5'-phosphate oxidase Atc_0911 PF01571 Aminomethyltransferase folate-binding domain Atc_0911 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atc_0912 PF01597 Glycine cleavage H-protein Atc_0913 PF02347 Glycine cleavage system P-protein Atc_0914 PF02347 Glycine cleavage system P-protein Atc_0915 PF07726 ATPase family associated with various cellular activities (AAA) Atc_0917 PF01841 Transglutaminase-like superfamily Atc_0917 PF11992 Atc_0917 Atc_0918 PF00005 ABC transporter Atc_0918 PF00664 ABC transporter transmembrane region Atc_0919 PF00037 4Fe-4S binding domain Atc_0919 PF11953 Domain of unknown function (DUF3470) Atc_0920 PF02635 DsrE/DsrF-like family Atc_0921 PF00578 AhpC/TSA family Atc_0921 PF10417 C-terminal domain of 1-Cys peroxiredoxin Atc_0922 PF02656 Atc_0922 Atc_0923 PF01207 Dihydrouridine synthase (Dus) Atc_0924 PF12710 haloacid dehalogenase-like hydrolase Atc_0925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atc_0925 PF03466 LysR substrate binding domain Atc_0926 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Atc_0926 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Atc_0927 PF00101 Ribulose bisphosphate carboxylase, small chain Atc_0928 PF12288 Atc_0928 Atc_0929 PF08936 Carboxysome Shell Carbonic Anhydrase Atc_0930 PF03319 Ethanolamine utilisation protein EutN/carboxysome Atc_0931 PF03319 Ethanolamine utilisation protein EutN/carboxysome Atc_0932 PF00936 BMC domain Atc_0933 PF00936 BMC domain Atc_0934 PF00210 Ferritin-like domain Atc_0936 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_0938 PF00092 von Willebrand factor type A domain Atc_0939 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atc_0939 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atc_0941 PF10070 Atc_0941 Atc_0942 PF00543 Nitrogen regulatory protein P-II Atc_0943 PF07728 AAA domain (dynein-related subfamily) Atc_0943 PF08406 Atc_0943 Atc_0944 PF00936 BMC domain Atc_0945 PF00293 NUDIX domain Atc_0946 PF08534 Redoxin Atc_0948 PF00171 Aldehyde dehydrogenase family Atc_0948 PF01619 Proline dehydrogenase Atc_0948 PF14850 DNA-binding domain of Proline dehydrogenase Atc_0949 PF01645 Conserved region in glutamate synthase Atc_0950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_0951 PF01022 Bacterial regulatory protein, arsR family Atc_0952 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Atc_0952 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Atc_0953 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Atc_0953 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atc_0954 PF02222 ATP-grasp domain Atc_0955 PF00155 Aminotransferase class I and II Atc_0958 PF01906 Putative heavy-metal-binding Atc_0959 PF01906 Putative heavy-metal-binding Atc_0960 PF04012 Atc_0960 Atc_0961 PF00027 Cyclic nucleotide-binding domain Atc_0962 PF02190 ATP-dependent protease La (LON) domain Atc_0963 PF04055 Radical SAM superfamily Atc_0963 PF06969 HemN C-terminal domain Atc_0965 PF00849 RNA pseudouridylate synthase Atc_0965 PF01479 S4 domain Atc_0967 PF07690 Major Facilitator Superfamily Atc_0968 PF00768 D-alanyl-D-alanine carboxypeptidase Atc_0969 PF01925 Atc_0969 Atc_0970 PF13649 Methyltransferase domain Atc_0971 PF01863 Protein of unknown function DUF45 Atc_0972 PF01979 Amidohydrolase family Atc_0974 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atc_0975 PF01451 Low molecular weight phosphotyrosine protein phosphatase Atc_0976 PF12840 Helix-turn-helix domain Atc_0977 PF02040 Atc_0977 Atc_0979 PF00892 EamA-like transporter family Atc_0980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Atc_0981 PF01738 Dienelactone hydrolase family Atc_0982 PF00440 Bacterial regulatory proteins, tetR family Atc_0982 PF16925 Atc_0982 Atc_0983 PF13384 Homeodomain-like domain Atc_0986 PF10604 Polyketide cyclase / dehydrase and lipid transport Atc_0987 PF01152 Bacterial-like globin Atc_0988 PF00881 Nitroreductase family Atc_0989 PF00929 Exonuclease Atc_0989 PF01541 GIY-YIG catalytic domain Atc_0990 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) Atc_0995 PF01610 Atc_0995 Atc_0995 PF13542 Atc_0995 Atc_0995 PF14690 Atc_0995 Atc_0998 PF03729 Atc_0998 Atc_0999 PF13671 AAA domain Atc_1000 PF00575 S1 RNA binding domain Atc_1000 PF00773 RNB domain Atc_1000 PF08206 Ribonuclease B OB domain Atc_1000 PF08461 Ribonuclease R winged-helix domain Atc_1001 PF03976 Polyphosphate kinase 2 (PPK2) Atc_1002 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atc_1002 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_1003 PF03747 ADP-ribosylglycohydrolase Atc_1004 PF00994 Probable molybdopterin binding domain Atc_1005 PF00551 Formyl transferase Atc_1006 PF00586 AIR synthase related protein, N-terminal domain Atc_1006 PF02769 AIR synthase related protein, C-terminal domain Atc_1008 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Atc_1010 PF03631 Atc_1010 Atc_1011 PF02620 Atc_1011 Atc_1012 PF01783 Ribosomal L32p protein family Atc_1013 PF02504 Fatty acid synthesis protein Atc_1014 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Atc_1014 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Atc_1015 PF00698 Acyl transferase domain Atc_1016 PF13561 Enoyl-(Acyl carrier protein) reductase Atc_1017 PF00550 Phosphopantetheine attachment site Atc_1018 PF00109 Beta-ketoacyl synthase, N-terminal domain Atc_1018 PF02801 Beta-ketoacyl synthase, C-terminal domain Atc_1019 PF01063 Aminotransferase class IV Atc_1020 PF02618 YceG-like family Atc_1021 PF02223 Thymidylate kinase Atc_1022 PF13177 DNA polymerase III, delta subunit Atc_1023 PF07238 PilZ domain Atc_1024 PF00589 Phage integrase family Atc_1026 PF00872 Atc_1026 Atc_1027 PF10412 Type IV secretion-system coupling protein DNA-binding domain Atc_1029 PF08751 TrwC relaxase Atc_1029 PF13604 AAA domain Atc_1030 PF04352 ProQ/FINO family Atc_1031 PF01610 Atc_1031 Atc_1031 PF13542 Atc_1031 Atc_1031 PF14690 Atc_1031 Atc_1032 PF01610 Atc_1032 Atc_1032 PF13542 Atc_1032 Atc_1032 PF14690 Atc_1032 Atc_1033 PF13362 Toprim domain Atc_1035 PF00589 Phage integrase family Atc_1037 PF01609 Transposase DDE domain Atc_1037 PF05598 Atc_1037 Atc_1038 PF03466 LysR substrate binding domain Atc_1039 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atc_1039 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atc_1040 PF10070 Atc_1040 Atc_1044 PF00920 Dehydratase family Atc_1045 PF01300 Telomere recombination Atc_1045 PF03481 Putative GTP-binding controlling metal-binding Atc_1047 PF11799 impB/mucB/samB family C-terminal domain Atc_1049 PF12760 Transposase zinc-ribbon domain Atc_1049 PF12762 Atc_1049 Atc_1050 PF00156 Phosphoribosyl transferase domain Atc_1051 PF06127 Atc_1051 Atc_1052 PF01609 Transposase DDE domain Atc_1052 PF05598 Atc_1052 Atc_1053 PF01871 AMMECR1 Atc_1054 PF01875 Memo-like protein Atc_1055 PF04055 Radical SAM superfamily Atc_1056 PF00723 Glycosyl hydrolases family 15 Atc_1056 PF09137 Glucodextranase, domain N Atc_1057 PF03243 Alkylmercury lyase Atc_1058 PF00403 Heavy-metal-associated domain Atc_1058 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atc_1058 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_1059 PF00403 Heavy-metal-associated domain Atc_1060 PF02411 Atc_1060 Atc_1062 PF03050 Atc_1062 Atc_1062 PF13007 Atc_1062 Atc_1062 PF13817 Atc_1062 Atc_1063 PF05717 Atc_1063 Atc_1065 PF01695 IstB-like ATP binding protein Atc_1066 PF00665 Integrase core domain Atc_1068 PF02683 Atc_1068 Atc_1068 PF11412 Disulphide bond corrector protein DsbC Atc_1068 PF13899 Thioredoxin-like Atc_1069 PF02635 DsrE/DsrF-like family Atc_1070 PF04542 Sigma-70 region 2 Atc_1070 PF08281 Sigma-70, region 4 Atc_1071 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) Atc_1072 PF05114 Protein of unknown function (DUF692) Atc_1073 PF10048 Atc_1073 Atc_1074 PF01610 Atc_1074 Atc_1074 PF13542 Atc_1074 Atc_1074 PF14690 Atc_1074 Atc_1075 PF07681 Atc_1075 Atc_1077 PF12698 ABC-2 family transporter protein Atc_1078 PF12698 ABC-2 family transporter protein Atc_1079 PF00005 ABC transporter Atc_1080 PF16576 Atc_1080 Atc_1081 PF02321 Outer membrane efflux protein Atc_1082 PF02683 Atc_1082 Atc_1083 PF13192 Thioredoxin domain Atc_1085 PF00872 Atc_1085 Atc_1088 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atc_1088 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atc_1089 PF10070 Atc_1089 Atc_1090 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atc_1090 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atc_1091 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atc_1091 PF03466 LysR substrate binding domain Atc_1092 PF00990 GGDEF domain Atc_1092 PF13426 PAS domain Atc_1093 PF04264 YceI-like domain Atc_1094 PF03358 NADPH-dependent FMN reductase Atc_1095 PF01638 HxlR-like helix-turn-helix Atc_1100 PF01609 Transposase DDE domain Atc_1100 PF05598 Atc_1100 Atc_1103 PF13401 AAA domain Atc_1104 PF00665 Integrase core domain Atc_1104 PF13565 Atc_1104 Atc_1106 PF03573 outer membrane porin, OprD family Atc_1107 PF13531 Bacterial extracellular solute-binding protein Atc_1109 PF02661 Fic/DOC family Atc_1112 PF01610 Atc_1112 Atc_1112 PF13542 Atc_1112 Atc_1112 PF14690 Atc_1112 Atc_1114 PF00271 Helicase conserved C-terminal domain Atc_1114 PF04851 Type III restriction enzyme, res subunit Atc_1116 PF02254 TrkA-N domain Atc_1116 PF07885 Ion channel Atc_1121 PF13538 UvrD-like helicase C-terminal domain Atc_1121 PF13604 AAA domain Atc_1121 PF14490 Helix-hairpin-helix containing domain Atc_1121 PF14520 Helix-hairpin-helix domain Atc_1122 PF00072 Response regulator receiver domain Atc_1122 PF03861 ANTAR domain Atc_1123 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atc_1124 PF00384 Molybdopterin oxidoreductase Atc_1124 PF01568 Molydopterin dinucleotide binding domain Atc_1124 PF04324 BFD-like [2Fe-2S] binding domain Atc_1124 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atc_1125 PF00355 Rieske [2Fe-2S] domain Atc_1126 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Atc_1126 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Atc_1126 PF04324 BFD-like [2Fe-2S] binding domain Atc_1126 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_1127 PF13372 Alginate export Atc_1128 PF07690 Major Facilitator Superfamily Atc_1129 PF13379 NMT1-like family Atc_1131 PF01609 Transposase DDE domain Atc_1131 PF05598 Atc_1131 Atc_1132 PF07929 Plasmid pRiA4b ORF-3-like protein Atc_1133 PF02384 N-6 DNA Methylase Atc_1133 PF12161 HsdM N-terminal domain Atc_1134 PF10544 Atc_1134 Atc_1135 PF01420 Type I restriction modification DNA specificity domain Atc_1138 PF01610 Atc_1138 Atc_1138 PF13542 Atc_1138 Atc_1138 PF14690 Atc_1138 Atc_1140 PF00665 Integrase core domain Atc_1141 PF01695 IstB-like ATP binding protein Atc_1142 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Atc_1144 PF15731 Atc_1144 Atc_1146 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Atc_1146 PF04851 Type III restriction enzyme, res subunit Atc_1149 PF13091 PLD-like domain Atc_1150 PF00149 Calcineurin-like phosphoesterase Atc_1151 PF01258 Prokaryotic dksA/traR C4-type zinc finger Atc_1152 PF00436 Single-strand binding protein family Atc_1154 PF03167 Uracil DNA glycosylase superfamily Atc_1157 PF00149 Calcineurin-like phosphoesterase Atc_1161 PF01420 Type I restriction modification DNA specificity domain Atc_1161 PF02384 N-6 DNA Methylase Atc_1161 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) Atc_1165 PF00437 Type II/IV secretion system protein Atc_1166 PF10671 Toxin co-regulated pilus biosynthesis protein Q Atc_1167 PF01464 Transglycosylase SLT domain Atc_1168 PF00263 Atc_1168 Atc_1168 PF07655 Atc_1168 Atc_1169 PF06864 Atc_1169 Atc_1171 PF00437 Type II/IV secretion system protein Atc_1172 PF00482 Type II secretion system (T2SS), protein F Atc_1173 PF08805 PilS N terminal Atc_1174 PF00437 Type II/IV secretion system protein Atc_1175 PF07419 PilM Atc_1176 PF04917 Atc_1176 Atc_1177 PF05534 Atc_1177 Atc_1179 PF05101 Atc_1179 Atc_1180 PF03135 Atc_1180 Atc_1180 PF05203 Hom_end-associated Hint Atc_1181 PF07927 YcfA-like protein Atc_1182 PF15919 Atc_1182 Atc_1188 PF04610 Atc_1188 Atc_1190 PF04851 Type III restriction enzyme, res subunit Atc_1191 PF01555 DNA methylase Atc_1192 PF10088 Atc_1192 Atc_1195 PF07282 Atc_1195 Atc_1201 PF04335 VirB8 protein Atc_1202 PF03524 Conjugal transfer protein Atc_1203 PF03743 Bacterial conjugation TrbI-like protein Atc_1205 PF13614 AAA domain Atc_1206 PF02195 ParB-like nuclease domain Atc_1206 PF13560 Helix-turn-helix domain Atc_1209 PF08346 Atc_1209 Atc_1210 PF08346 Atc_1210 Atc_1210 PF10544 Atc_1210 Atc_1211 PF02534 Type IV secretory system Conjugative DNA transfer Atc_1214 PF02767 DNA polymerase III beta subunit, central domain Atc_1214 PF02768 DNA polymerase III beta subunit, C-terminal domain Atc_1215 PF01464 Transglycosylase SLT domain Atc_1216 PF00271 Helicase conserved C-terminal domain Atc_1221 PF08798 CRISPR associated protein Atc_1224 PF13307 Helicase C-terminal domain Atc_1225 PF14373 Atc_1225 Atc_1227 PF13098 Thioredoxin-like domain Atc_1228 PF01555 DNA methylase Atc_1234 PF01555 DNA methylase Atc_1235 PF01555 DNA methylase Atc_1241 PF03457 Helicase associated domain Atc_1241 PF05063 Atc_1241 Atc_1243 PF10502 Signal peptidase, peptidase S26 Atc_1244 PF11843 Atc_1244 Atc_1248 PF00145 C-5 cytosine-specific DNA methylase Atc_1250 PF04851 Type III restriction enzyme, res subunit Atc_1251 PF01555 DNA methylase Atc_1252 PF07282 Atc_1252 Atc_1253 PF01381 Helix-turn-helix Atc_1256 PF01131 DNA topoisomerase Atc_1256 PF01751 Toprim domain Atc_1257 PF01367 5'-3' exonuclease, C-terminal SAM fold Atc_1257 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Atc_1267 PF00216 Bacterial DNA-binding protein Atc_1269 PF01464 Transglycosylase SLT domain Atc_1278 PF11171 Atc_1278 Atc_1279 PF08401 Atc_1279 Atc_1280 PF02086 D12 class N6 adenine-specific DNA methyltransferase Atc_1282 PF05866 Endodeoxyribonuclease RusA Atc_1285 PF02195 ParB-like nuclease domain Atc_1285 PF05869 Atc_1285 Atc_1287 PF05269 Bacteriophage CII protein Atc_1291 PF03837 Atc_1291 Atc_1292 PF09588 YqaJ-like viral recombinase domain Atc_1293 PF06945 Atc_1293 Atc_1295 PF07282 Atc_1295 Atc_1296 PF00589 Phage integrase family Atc_1297 PF01475 Ferric uptake regulator family Atc_1298 PF07715 TonB-dependent Receptor Plug Domain Atc_1299 PF01266 FAD dependent oxidoreductase Atc_1300 PF04357 Atc_1300 Atc_1301 PF01103 Surface antigen Atc_1301 PF07244 Surface antigen variable number repeat Atc_1302 PF12169 DNA polymerase III subunits gamma and tau domain III Atc_1302 PF13177 DNA polymerase III, delta subunit Atc_1303 PF02575 YbaB/EbfC DNA-binding family Atc_1304 PF02132 RecR protein Atc_1304 PF13662 Toprim domain Atc_1305 PF00909 Ammonium Transporter Family Atc_1306 PF01256 Carbohydrate kinase Atc_1307 PF00202 Aminotransferase class-III Atc_1308 PF00571 CBS domain Atc_1309 PF02367 Uncharacterised P-loop hydrolase UPF0079 Atc_1310 PF01119 DNA mismatch repair protein, C-terminal domain Atc_1310 PF08676 MutL C terminal dimerisation domain Atc_1310 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_1311 PF01715 IPP transferase Atc_1314 PF04226 Atc_1314 Atc_1315 PF01906 Putative heavy-metal-binding Atc_1316 PF00474 Sodium:solute symporter family Atc_1316 PF11755 Atc_1316 Atc_1317 PF01152 Bacterial-like globin Atc_1318 PF00291 Pyridoxal-phosphate dependent enzyme Atc_1318 PF00585 C-terminal regulatory domain of Threonine dehydratase Atc_1319 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atc_1320 PF12146 Putative lysophospholipase Atc_1321 PF04324 BFD-like [2Fe-2S] binding domain Atc_1322 PF00207 Alpha-2-macroglobulin family Atc_1322 PF01835 MG2 domain Atc_1322 PF07703 Alpha-2-macroglobulin family N-terminal region Atc_1322 PF11974 Alpha-2-macroglobulin MG1 domain Atc_1323 PF00905 Penicillin binding protein transpeptidase domain Atc_1323 PF00912 Transglycosylase Atc_1323 PF06832 Atc_1323 Atc_1324 PF00871 Acetokinase family Atc_1325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atc_1325 PF00364 Biotin-requiring enzyme Atc_1325 PF02817 e3 binding domain Atc_1326 PF02779 Transketolase, pyrimidine binding domain Atc_1326 PF02780 Transketolase, C-terminal domain Atc_1327 PF00676 Dehydrogenase E1 component Atc_1328 PF02627 Carboxymuconolactone decarboxylase family Atc_1329 PF01676 Metalloenzyme superfamily Atc_1329 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Atc_1330 PF00391 PEP-utilising enzyme, mobile domain Atc_1330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Atc_1330 PF02896 PEP-utilising enzyme, TIM barrel domain Atc_1331 PF13469 Sulfotransferase family Atc_1332 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Atc_1332 PF05036 Sporulation related domain Atc_1333 PF01546 Peptidase family M20/M25/M40 Atc_1333 PF07687 Peptidase dimerisation domain Atc_1334 PF00132 Bacterial transferase hexapeptide (six repeats) Atc_1334 PF14602 Hexapeptide repeat of succinyl-transferase Atc_1334 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Atc_1335 PF00155 Aminotransferase class I and II Atc_1336 PF00892 EamA-like transporter family Atc_1337 PF08241 Methyltransferase domain Atc_1338 PF01979 Amidohydrolase family Atc_1339 PF13406 Transglycosylase SLT domain Atc_1340 PF00877 NlpC/P60 family Atc_1341 PF01925 Atc_1341 Atc_1342 PF02678 Pirin Atc_1342 PF05726 Pirin C-terminal cupin domain Atc_1343 PF01609 Transposase DDE domain Atc_1343 PF05598 Atc_1343 Atc_1344 PF03976 Polyphosphate kinase 2 (PPK2) Atc_1345 PF00593 TonB dependent receptor Atc_1345 PF07715 TonB-dependent Receptor Plug Domain Atc_1346 PF04185 Phosphoesterase family Atc_1347 PF00083 Sugar (and other) transporter Atc_1348 PF13439 Glycosyltransferase Family 4 Atc_1348 PF13692 Glycosyl transferases group 1 Atc_1349 PF12850 Calcineurin-like phosphoesterase superfamily domain Atc_1350 PF00486 Transcriptional regulatory protein, C terminal Atc_1351 PF01618 Atc_1351 Atc_1352 PF02472 Biopolymer transport protein ExbD/TolR Atc_1353 PF00593 TonB dependent receptor Atc_1354 PF03544 Gram-negative bacterial TonB protein C-terminal Atc_1355 PF13416 Bacterial extracellular solute-binding protein Atc_1356 PF00528 Binding-protein-dependent transport system inner membrane component Atc_1357 PF00005 ABC transporter Atc_1360 PF00445 Ribonuclease T2 family Atc_1361 PF02321 Outer membrane efflux protein Atc_1362 PF00529 HlyD family secretion protein Atc_1362 PF16576 Atc_1362 Atc_1363 PF04893 Atc_1363 Atc_1364 PF07731 Multicopper oxidase Atc_1364 PF07732 Multicopper oxidase Atc_1365 PF00334 Nucleoside diphosphate kinase Atc_1366 PF04055 Radical SAM superfamily Atc_1367 PF13174 Tetratricopeptide repeat Atc_1367 PF13181 Tetratricopeptide repeat Atc_1367 PF13432 Tetratricopeptide repeat Atc_1368 PF13413 Helix-turn-helix domain Atc_1368 PF13464 Atc_1368 Atc_1369 PF04551 GcpE protein Atc_1370 PF13393 Histidyl-tRNA synthetase Atc_1371 PF09976 Tetratricopeptide repeat Atc_1372 PF13360 PQQ-like domain Atc_1373 PF01926 50S ribosome-binding GTPase Atc_1373 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Atc_1375 PF00300 Histidine phosphatase superfamily (branch 1) Atc_1376 PF02635 DsrE/DsrF-like family Atc_1378 PF00174 Oxidoreductase molybdopterin binding domain Atc_1379 PF01609 Transposase DDE domain Atc_1379 PF05598 Atc_1379 Atc_1380 PF12849 PBP superfamily domain Atc_1381 PF00528 Binding-protein-dependent transport system inner membrane component Atc_1382 PF00528 Binding-protein-dependent transport system inner membrane component Atc_1383 PF10672 S-adenosylmethionine-dependent methyltransferase Atc_1384 PF01008 Initiation factor 2 subunit family Atc_1385 PF04185 Phosphoesterase family Atc_1386 PF00521 DNA gyrase/topoisomerase IV, subunit A Atc_1386 PF03989 DNA gyrase C-terminal domain, beta-propeller Atc_1387 PF00266 Aminotransferase class-V Atc_1388 PF00800 Prephenate dehydratase Atc_1388 PF01817 Chorismate mutase type II Atc_1388 PF01842 ACT domain Atc_1389 PF00155 Aminotransferase class I and II Atc_1390 PF00793 DAHP synthetase I family Atc_1391 PF02153 Prephenate dehydrogenase Atc_1392 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Atc_1393 PF02224 Cytidylate kinase Atc_1394 PF00575 S1 RNA binding domain Atc_1395 PF00216 Bacterial DNA-binding protein Atc_1397 PF13432 Tetratricopeptide repeat Atc_1398 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Atc_1399 PF00156 Phosphoribosyl transferase domain Atc_1400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Atc_1400 PF05697 Bacterial trigger factor protein (TF) Atc_1400 PF05698 Bacterial trigger factor protein (TF) C-terminus Atc_1401 PF00574 Clp protease Atc_1402 PF06689 ClpX C4-type zinc finger Atc_1402 PF07724 AAA domain (Cdc48 subfamily) Atc_1402 PF10431 C-terminal, D2-small domain, of ClpB protein Atc_1403 PF00004 ATPase family associated with various cellular activities (AAA) Atc_1403 PF02190 ATP-dependent protease La (LON) domain Atc_1403 PF05362 Lon protease (S16) C-terminal proteolytic domain Atc_1404 PF00216 Bacterial DNA-binding protein Atc_1405 PF13145 PPIC-type PPIASE domain Atc_1405 PF13624 SurA N-terminal domain Atc_1406 PF07238 PilZ domain Atc_1407 PF10975 Atc_1407 Atc_1408 PF02120 Flagellar hook-length control protein FliK Atc_1409 PF03734 L,D-transpeptidase catalytic domain Atc_1410 PF00990 GGDEF domain Atc_1410 PF13426 PAS domain Atc_1413 PF07963 Prokaryotic N-terminal methylation motif Atc_1414 PF07963 Prokaryotic N-terminal methylation motif Atc_1417 PF00990 GGDEF domain Atc_1417 PF13185 GAF domain Atc_1417 PF13426 PAS domain Atc_1418 PF07238 PilZ domain Atc_1419 PF00482 Type II secretion system (T2SS), protein F Atc_1420 PF07963 Prokaryotic N-terminal methylation motif Atc_1420 PF12019 Type II transport protein GspH Atc_1421 PF07963 Prokaryotic N-terminal methylation motif Atc_1422 PF16074 Atc_1422 Atc_1425 PF09941 Atc_1425 Atc_1426 PF08534 Redoxin Atc_1427 PF00905 Penicillin binding protein transpeptidase domain Atc_1427 PF00912 Transglycosylase Atc_1427 PF17092 Atc_1427 Atc_1428 PF00749 tRNA synthetases class I (E and Q), catalytic domain Atc_1429 PF01406 tRNA synthetases class I (C) catalytic domain Atc_1429 PF09190 DALR domain Atc_1431 PF00575 S1 RNA binding domain Atc_1431 PF10150 Ribonuclease E/G family Atc_1432 PF00849 RNA pseudouridylate synthase Atc_1432 PF01479 S4 domain Atc_1433 PF13419 Haloacid dehalogenase-like hydrolase Atc_1434 PF00528 Binding-protein-dependent transport system inner membrane component Atc_1435 PF00005 ABC transporter Atc_1436 PF01610 Atc_1436 Atc_1436 PF13542 Atc_1436 Atc_1436 PF14690 Atc_1436 Atc_1438 PF07849 Atc_1438 Atc_1439 PF00723 Glycosyl hydrolases family 15 Atc_1439 PF09137 Glucodextranase, domain N Atc_1440 PF13561 Enoyl-(Acyl carrier protein) reductase Atc_1441 PF01343 Peptidase family S49 Atc_1442 PF00248 Aldo/keto reductase family Atc_1445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atc_1446 PF00072 Response regulator receiver domain Atc_1446 PF01584 CheW-like domain Atc_1447 PF00753 Metallo-beta-lactamase superfamily Atc_1449 PF01584 CheW-like domain Atc_1449 PF01627 Hpt domain Atc_1449 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_1449 PF02895 Signal transducing histidine kinase, homodimeric domain Atc_1451 PF00072 Response regulator receiver domain Atc_1452 PF05036 Sporulation related domain Atc_1453 PF00691 OmpA family Atc_1453 PF13677 Atc_1453 Atc_1454 PF07238 PilZ domain Atc_1455 PF02623 FliW protein Atc_1456 PF02599 Global regulator protein family Atc_1457 PF05130 FlgN protein Atc_1458 PF04316 Anti-sigma-28 factor, FlgM Atc_1459 PF13144 SAF-like Atc_1460 PF00460 Flagella basal body rod protein Atc_1461 PF00460 Flagella basal body rod protein Atc_1461 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atc_1462 PF03963 Atc_1462 Atc_1462 PF13860 FlgD Ig-like domain Atc_1462 PF13861 FlgD Tudor-like domain Atc_1463 PF00460 Flagella basal body rod protein Atc_1463 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atc_1463 PF07559 Flagellar basal body protein FlaE Atc_1464 PF00460 Flagella basal body rod protein Atc_1464 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atc_1465 PF00460 Flagella basal body rod protein Atc_1465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atc_1466 PF02107 Atc_1466 Atc_1467 PF02119 Atc_1467 Atc_1468 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Atc_1468 PF10135 Atc_1468 Atc_1470 PF00460 Flagella basal body rod protein Atc_1470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atc_1471 PF00669 Bacterial flagellin N-terminal helical region Atc_1472 PF13489 Methyltransferase domain Atc_1473 PF01610 Atc_1473 Atc_1473 PF13542 Atc_1473 Atc_1473 PF14690 Atc_1473 Atc_1474 PF00535 Glycosyl transferase family 2 Atc_1474 PF05045 Atc_1474 Atc_1475 PF00669 Bacterial flagellin N-terminal helical region Atc_1475 PF00700 Bacterial flagellin C-terminal helical region Atc_1475 PF07196 Flagellin hook IN motif Atc_1477 PF02465 Atc_1477 Atc_1477 PF07195 Atc_1477 Atc_1477 PF07196 Flagellin hook IN motif Atc_1478 PF02561 Flagellar protein FliS Atc_1479 PF16823 Atc_1479 Atc_1480 PF00158 Sigma-54 interaction domain Atc_1480 PF02954 Bacterial regulatory protein, Fis family Atc_1481 PF00512 His Kinase A (phospho-acceptor) domain Atc_1481 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_1481 PF13188 PAS domain Atc_1482 PF00072 Response regulator receiver domain Atc_1482 PF00158 Sigma-54 interaction domain Atc_1482 PF02954 Bacterial regulatory protein, Fis family Atc_1483 PF02049 Atc_1483 Atc_1484 PF01514 Secretory protein of YscJ/FliF family Atc_1484 PF08345 Atc_1484 Atc_1485 PF01706 FliG C-terminal domain Atc_1485 PF14841 FliG middle domain Atc_1485 PF14842 FliG N-terminal domain Atc_1486 PF02108 Atc_1486 Atc_1487 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atc_1488 PF02050 Flagellar FliJ protein Atc_1489 PF02120 Flagellar hook-length control protein FliK Atc_1490 PF01052 Surface presentation of antigens (SPOA) Atc_1490 PF02154 Flagellar motor switch protein FliM Atc_1491 PF01052 Surface presentation of antigens (SPOA) Atc_1492 PF04347 Atc_1492 Atc_1493 PF00813 Atc_1493 Atc_1494 PF01313 Atc_1494 Atc_1495 PF01311 Atc_1495 Atc_1496 PF01312 FlhB HrpN YscU SpaS Family Atc_1497 PF00771 FHIPEP family Atc_1498 PF00448 SRP54-type protein, GTPase domain Atc_1499 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_1500 PF04539 Sigma-70 region 3 Atc_1500 PF04542 Sigma-70 region 2 Atc_1500 PF04545 Sigma-70, region 4 Atc_1501 PF01618 Atc_1501 Atc_1502 PF00488 MutS domain V Atc_1502 PF01624 MutS domain I Atc_1502 PF05188 MutS domain II Atc_1502 PF05190 MutS family domain IV Atc_1502 PF05192 MutS domain III Atc_1503 PF01027 Inhibitor of apoptosis-promoting Bax1 Atc_1504 PF00929 Exonuclease Atc_1504 PF12843 Atc_1504 Atc_1505 PF00596 Class II Aldolase and Adducin N-terminal domain Atc_1506 PF01713 Smr domain Atc_1507 PF01565 FAD binding domain Atc_1507 PF02754 Atc_1507 Atc_1507 PF02913 FAD linked oxidases, C-terminal domain Atc_1507 PF11880 Atc_1507 Atc_1507 PF12447 Atc_1507 Atc_1507 PF13183 4Fe-4S dicluster domain Atc_1508 PF02569 Pantoate-beta-alanine ligase Atc_1509 PF02548 Ketopantoate hydroxymethyltransferase Atc_1510 PF01712 Deoxynucleoside kinase Atc_1511 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Atc_1512 PF01743 Poly A polymerase head domain Atc_1512 PF12626 Polymerase A arginine-rich C-terminus Atc_1512 PF12627 Probable RNA and SrmB- binding site of polymerase A Atc_1514 PF00478 IMP dehydrogenase / GMP reductase domain Atc_1514 PF00571 CBS domain Atc_1515 PF00117 Glutamine amidotransferase class-I Atc_1515 PF00958 GMP synthase C terminal domain Atc_1516 PF00027 Cyclic nucleotide-binding domain Atc_1516 PF13545 Crp-like helix-turn-helix domain Atc_1517 PF00042 Globin Atc_1518 PF00111 2Fe-2S iron-sulfur cluster binding domain Atc_1518 PF00175 Oxidoreductase NAD-binding domain Atc_1518 PF00970 Oxidoreductase FAD-binding domain Atc_1519 PF00730 HhH-GPD superfamily base excision DNA repair protein Atc_1520 PF01814 Hemerythrin HHE cation binding domain Atc_1521 PF04343 Atc_1521 Atc_1522 PF07690 Major Facilitator Superfamily Atc_1523 PF00654 Voltage gated chloride channel Atc_1524 PF00654 Voltage gated chloride channel Atc_1525 PF07690 Major Facilitator Superfamily Atc_1526 PF03466 LysR substrate binding domain Atc_1527 PF01610 Atc_1527 Atc_1527 PF13542 Atc_1527 Atc_1527 PF14690 Atc_1527 Atc_1528 PF00501 AMP-binding enzyme Atc_1528 PF13193 AMP-binding enzyme C-terminal domain Atc_1528 PF16177 Atc_1528 Atc_1529 PF00343 Carbohydrate phosphorylase Atc_1529 PF11897 Atc_1529 Atc_1530 PF00224 Pyruvate kinase, barrel domain Atc_1530 PF02887 Pyruvate kinase, alpha/beta domain Atc_1531 PF01791 DeoC/LacD family aldolase Atc_1532 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atc_1532 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_1533 PF00294 pfkB family carbohydrate kinase Atc_1534 PF01515 Phosphate acetyl/butaryl transferase Atc_1537 PF04966 Carbohydrate-selective porin, OprB family Atc_1538 PF01544 CorA-like Mg2+ transporter protein Atc_1539 PF01544 CorA-like Mg2+ transporter protein Atc_1540 PF01544 CorA-like Mg2+ transporter protein Atc_1541 PF01544 CorA-like Mg2+ transporter protein Atc_1542 PF01544 CorA-like Mg2+ transporter protein Atc_1543 PF01566 Atc_1543 Atc_1545 PF02308 Atc_1545 Atc_1549 PF01381 Helix-turn-helix Atc_1550 PF13091 PLD-like domain Atc_1551 PF00990 GGDEF domain Atc_1552 PF00990 GGDEF domain Atc_1553 PF01610 Atc_1553 Atc_1553 PF13542 Atc_1553 Atc_1553 PF14690 Atc_1553 Atc_1555 PF03748 Atc_1555 Atc_1556 PF01618 Atc_1556 Atc_1557 PF00691 OmpA family Atc_1557 PF13677 Atc_1557 Atc_1558 PF00563 EAL domain Atc_1558 PF00990 GGDEF domain Atc_1559 PF00990 GGDEF domain Atc_1559 PF13426 PAS domain Atc_1562 PF01757 Atc_1562 Atc_1563 PF01610 Atc_1563 Atc_1563 PF13542 Atc_1563 Atc_1563 PF14690 Atc_1563 Atc_1565 PF01695 IstB-like ATP binding protein Atc_1566 PF00665 Integrase core domain Atc_1567 PF05598 Atc_1567 Atc_1568 PF01609 Transposase DDE domain Atc_1569 PF01609 Transposase DDE domain Atc_1569 PF05598 Atc_1569 Atc_1570 PF01610 Atc_1570 Atc_1570 PF13542 Atc_1570 Atc_1570 PF14690 Atc_1570 Atc_1571 PF02796 Helix-turn-helix domain of resolvase Atc_1572 PF00665 Integrase core domain Atc_1574 PF05717 Atc_1574 Atc_1575 PF03050 Atc_1575 Atc_1575 PF13007 Atc_1575 Atc_1575 PF13817 Atc_1575 Atc_1577 PF01695 IstB-like ATP binding protein Atc_1578 PF01609 Transposase DDE domain Atc_1580 PF03573 outer membrane porin, OprD family Atc_1581 PF03595 Voltage-dependent anion channel Atc_1583 PF02322 Atc_1583 Atc_1584 PF01654 Atc_1584 Atc_1585 PF00027 Cyclic nucleotide-binding domain Atc_1585 PF13545 Crp-like helix-turn-helix domain Atc_1587 PF00083 Sugar (and other) transporter Atc_1589 PF01609 Transposase DDE domain Atc_1589 PF05598 Atc_1589 Atc_1590 PF00873 AcrB/AcrD/AcrF family Atc_1591 PF16576 Atc_1591 Atc_1592 PF02321 Outer membrane efflux protein Atc_1593 PF00872 Atc_1593 Atc_1593A PF00072 Response regulator receiver domain Atc_1593A PF00486 Transcriptional regulatory protein, C terminal Atc_1594 PF00512 His Kinase A (phospho-acceptor) domain Atc_1594 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_1595 PF01011 PQQ enzyme repeat Atc_1595 PF13360 PQQ-like domain Atc_1596 PF04173 Atc_1596 Atc_1596 PF07680 Atc_1596 Atc_1597 PF13358 DDE superfamily endonuclease Atc_1597 PF13518 Helix-turn-helix domain Atc_1597 PF13592 Atc_1597 Atc_1598 PF08238 Sel1 repeat Atc_1600 PF01609 Transposase DDE domain Atc_1600 PF05598 Atc_1600 Atc_1601 PF13360 PQQ-like domain Atc_1603 PF01654 Atc_1603 Atc_1604 PF02322 Atc_1604 Atc_1605 PF02656 Atc_1605 Atc_1606 PF00384 Molybdopterin oxidoreductase Atc_1606 PF01568 Molydopterin dinucleotide binding domain Atc_1606 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atc_1607 PF13247 4Fe-4S dicluster domain Atc_1608 PF04976 Atc_1608 Atc_1609 PF01370 NAD dependent epimerase/dehydratase family Atc_1611 PF02656 Atc_1611 Atc_1614 PF04055 Radical SAM superfamily Atc_1614 PF06463 Molybdenum Cofactor Synthesis C Atc_1616 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atc_1618 PF05717 Atc_1618 Atc_1619 PF03050 Atc_1619 Atc_1619 PF13007 Atc_1619 Atc_1619 PF13817 Atc_1619 Atc_1621 PF03466 LysR substrate binding domain Atc_1622 PF13683 Atc_1622 Atc_1623 PF00665 Integrase core domain Atc_1623 PF13276 Atc_1623 Atc_1628 PF12760 Transposase zinc-ribbon domain Atc_1628 PF12762 Atc_1628 Atc_1629 PF01609 Transposase DDE domain Atc_1629 PF05598 Atc_1629 Atc_1631 PF03050 Atc_1631 Atc_1631 PF13007 Atc_1631 Atc_1631 PF13817 Atc_1631 Atc_1632 PF05717 Atc_1632 Atc_1634 PF13520 Amino acid permease Atc_1635 PF02321 Outer membrane efflux protein Atc_1636 PF13437 HlyD family secretion protein Atc_1636 PF13533 Biotin-lipoyl like Atc_1637 PF00873 AcrB/AcrD/AcrF family Atc_1641 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Atc_1642 PF07690 Major Facilitator Superfamily Atc_1643 PF00034 Cytochrome c Atc_1645 PF00487 Atc_1645 Atc_1646 PF01370 NAD dependent epimerase/dehydratase family Atc_1647 PF01370 NAD dependent epimerase/dehydratase family Atc_1648 PF00999 Sodium/hydrogen exchanger family Atc_1648 PF02080 TrkA-C domain Atc_1648 PF02254 TrkA-N domain Atc_1649 PF01557 Fumarylacetoacetate (FAA) hydrolase family Atc_1650 PF00384 Molybdopterin oxidoreductase Atc_1650 PF01568 Molydopterin dinucleotide binding domain Atc_1651 PF02634 FdhD/NarQ family Atc_1652 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Atc_1653 PF02562 PhoH-like protein Atc_1653 PF13638 PIN domain Atc_1654 PF00578 AhpC/TSA family Atc_1655 PF13231 Atc_1655 Atc_1656 PF13419 Haloacid dehalogenase-like hydrolase Atc_1657 PF01258 Prokaryotic dksA/traR C4-type zinc finger Atc_1658 PF09968 Uncharacterized protein domain (DUF2202) Atc_1659 PF03551 Transcriptional regulator PadR-like family Atc_1660 PF01548 Atc_1660 Atc_1660 PF02371 Atc_1660 Atc_1661 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Atc_1661 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Atc_1662 PF07728 AAA domain (dynein-related subfamily) Atc_1662 PF08406 Atc_1662 Atc_1663 PF00092 von Willebrand factor type A domain Atc_1664 PF07883 Cupin domain Atc_1664 PF13560 Helix-turn-helix domain Atc_1665 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atc_1666 PF00146 NADH dehydrogenase Atc_1668 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atc_1669 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Atc_1669 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Atc_1670 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Atc_1671 PF03466 LysR substrate binding domain Atc_1674 PF00282 Pyridoxal-dependent decarboxylase conserved domain Atc_1675 PF02441 Flavoprotein Atc_1676 PF01225 Mur ligase family, catalytic domain Atc_1676 PF02875 Mur ligase family, glutamate ligase domain Atc_1676 PF08245 Mur ligase middle domain Atc_1678 PF05690 Thiazole biosynthesis protein ThiG Atc_1679 PF02597 ThiS family Atc_1680 PF13668 Ferritin-like domain Atc_1681 PF10099 Atc_1681 Atc_1682 PF04542 Sigma-70 region 2 Atc_1682 PF08281 Sigma-70, region 4 Atc_1683 PF01411 tRNA synthetases class II (A) Atc_1683 PF02272 DHHA1 domain Atc_1683 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atc_1684 PF02631 RecX family Atc_1685 PF00154 recA bacterial DNA recombination protein Atc_1686 PF02464 Competence-damaged protein Atc_1687 PF00586 AIR synthase related protein, N-terminal domain Atc_1687 PF02769 AIR synthase related protein, C-terminal domain Atc_1688 PF00749 tRNA synthetases class I (E and Q), catalytic domain Atc_1689 PF00753 Metallo-beta-lactamase superfamily Atc_1691 PF03749 Sugar fermentation stimulation protein Atc_1692 PF00557 Metallopeptidase family M24 Atc_1693 PF01842 ACT domain Atc_1693 PF01909 Nucleotidyltransferase domain Atc_1693 PF01966 HD domain Atc_1693 PF08335 GlnD PII-uridylyltransferase Atc_1694 PF04356 Protein of unknown function (DUF489) Atc_1695 PF00924 Mechanosensitive ion channel Atc_1696 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Atc_1697 PF00533 BRCA1 C Terminus (BRCT) domain Atc_1697 PF01653 NAD-dependent DNA ligase adenylation domain Atc_1697 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Atc_1697 PF03120 NAD-dependent DNA ligase OB-fold domain Atc_1697 PF12826 Helix-hairpin-helix motif Atc_1697 PF14520 Helix-hairpin-helix domain Atc_1698 PF12710 haloacid dehalogenase-like hydrolase Atc_1699 PF02463 RecF/RecN/SMC N terminal domain Atc_1700 PF14489 QueF-like protein Atc_1701 PF01266 FAD dependent oxidoreductase Atc_1702 PF01266 FAD dependent oxidoreductase Atc_1703 PF00730 HhH-GPD superfamily base excision DNA repair protein Atc_1704 PF00849 RNA pseudouridylate synthase Atc_1704 PF01479 S4 domain Atc_1705 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_1707 PF04079 Putative transcriptional regulators (Ypuh-like) Atc_1708 PF02616 ScpA/B protein Atc_1709 PF00579 tRNA synthetases class I (W and Y) Atc_1711 PF01300 Telomere recombination Atc_1712 PF06508 Queuosine biosynthesis protein QueC Atc_1714 PF00924 Mechanosensitive ion channel Atc_1715 PF00696 Amino acid kinase family Atc_1715 PF01472 PUA domain Atc_1716 PF13520 Amino acid permease Atc_1718 PF00072 Response regulator receiver domain Atc_1718 PF00563 EAL domain Atc_1718 PF00990 GGDEF domain Atc_1719 PF00072 Response regulator receiver domain Atc_1719 PF00512 His Kinase A (phospho-acceptor) domain Atc_1719 PF01590 GAF domain Atc_1719 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_1719 PF08447 PAS fold Atc_1719 PF08448 PAS fold Atc_1719 PF13185 GAF domain Atc_1720 PF01336 OB-fold nucleic acid binding domain Atc_1720 PF02811 PHP domain Atc_1720 PF07733 Bacterial DNA polymerase III alpha subunit Atc_1720 PF14579 Helix-hairpin-helix motif Atc_1722 PF03846 Cell division inhibitor SulA Atc_1723 PF00717 Peptidase S24-like Atc_1723 PF01726 LexA DNA binding domain Atc_1724 PF10116 Atc_1724 Atc_1725 PF03458 Atc_1725 Atc_1726 PF00403 Heavy-metal-associated domain Atc_1726 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atc_1726 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_1727 PF00534 Glycosyl transferases group 1 Atc_1727 PF00862 Sucrose synthase Atc_1728 PF00534 Glycosyl transferases group 1 Atc_1728 PF05116 Sucrose-6F-phosphate phosphohydrolase Atc_1728 PF13439 Glycosyltransferase Family 4 Atc_1729 PF00294 pfkB family carbohydrate kinase Atc_1730 PF00924 Mechanosensitive ion channel Atc_1731 PF00528 Binding-protein-dependent transport system inner membrane component Atc_1732 PF00528 Binding-protein-dependent transport system inner membrane component Atc_1733 PF12849 PBP superfamily domain Atc_1734 PF01687 Riboflavin kinase Atc_1734 PF06574 FAD synthetase Atc_1735 PF00133 tRNA synthetases class I (I, L, M and V) Atc_1735 PF06827 Zinc finger found in FPG and IleRS Atc_1735 PF08264 Anticodon-binding domain of tRNA Atc_1736 PF01252 Atc_1736 Atc_1739 PF00578 AhpC/TSA family Atc_1740 PF00005 ABC transporter Atc_1740 PF06472 Atc_1740 Atc_1741 PF02635 DsrE/DsrF-like family Atc_1742 PF00795 Carbon-nitrogen hydrolase Atc_1743 PF01520 N-acetylmuramoyl-L-alanine amidase Atc_1744 PF00085 Thioredoxin Atc_1745 PF00462 Glutaredoxin Atc_1746 PF00581 Rhodanese-like domain Atc_1747 PF11127 Protein of unknown function (DUF2892) Atc_1748 PF00873 AcrB/AcrD/AcrF family Atc_1749 PF16576 Atc_1749 Atc_1750 PF02321 Outer membrane efflux protein Atc_1751 PF01022 Bacterial regulatory protein, arsR family Atc_1752 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Atc_1753 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein Atc_1754 PF02036 SCP-2 sterol transfer family Atc_1755 PF00899 ThiF family Atc_1756 PF01026 TatD related DNase Atc_1757 PF01494 FAD binding domain Atc_1758 PF01494 FAD binding domain Atc_1759 PF04380 Atc_1759 Atc_1760 PF01078 Magnesium chelatase, subunit ChlI Atc_1760 PF13335 Atc_1760 Atc_1760 PF13541 Subunit ChlI of Mg-chelatase Atc_1761 PF02656 Atc_1761 Atc_1762 PF01066 CDP-alcohol phosphatidyltransferase Atc_1763 PF02666 Atc_1763 Atc_1764 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Atc_1764 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain Atc_1765 PF10369 Small subunit of acetolactate synthase Atc_1765 PF13710 ACT domain Atc_1766 PF00205 Thiamine pyrophosphate enzyme, central domain Atc_1766 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atc_1766 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atc_1767 PF00488 MutS domain V Atc_1769 PF01894 Uncharacterised protein family UPF0047 Atc_1770 PF14437 Atc_1770 Atc_1771 PF11104 Type IV pilus assembly protein PilM; Atc_1772 PF05137 Atc_1772 Atc_1773 PF04350 Pilus assembly protein, PilO Atc_1774 PF04351 Pilus assembly protein, PilP Atc_1775 PF00263 Atc_1775 Atc_1775 PF03958 Bacterial type II/III secretion system short domain Atc_1776 PF01202 Shikimate kinase Atc_1777 PF01761 3-dehydroquinate synthase Atc_1778 PF02511 Thymidylate synthase complementing protein Atc_1779 PF01966 HD domain Atc_1779 PF13286 Phosphohydrolase-associated domain Atc_1780 PF00310 Glutamine amidotransferases class-II Atc_1780 PF01493 GXGXG motif Atc_1780 PF01645 Conserved region in glutamate synthase Atc_1780 PF04898 Glutamate synthase central domain Atc_1781 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_1781 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Atc_1782 PF01208 Uroporphyrinogen decarboxylase (URO-D) Atc_1783 PF01553 Acyltransferase Atc_1784 PF13444 Acetyltransferase (GNAT) domain Atc_1785 PF00709 Adenylosuccinate synthetase Atc_1786 PF13393 Histidyl-tRNA synthetase Atc_1787 PF01145 SPFH domain / Band 7 family Atc_1788 PF01145 SPFH domain / Band 7 family Atc_1789 PF01926 50S ribosome-binding GTPase Atc_1789 PF13167 Atc_1789 Atc_1789 PF16360 Atc_1789 Atc_1790 PF17209 Atc_1790 Atc_1791 PF00311 Phosphoenolpyruvate carboxylase Atc_1792 PF02545 Maf-like protein Atc_1793 PF13384 Homeodomain-like domain Atc_1793 PF13683 Atc_1793 Atc_1794 PF13767 Atc_1794 Atc_1796 PF09335 Atc_1796 Atc_1797 PF03988 Atc_1797 Atc_1798 PF01610 Atc_1798 Atc_1798 PF13542 Atc_1798 Atc_1798 PF14690 Atc_1798 Atc_1801 PF03050 Atc_1801 Atc_1801 PF13007 Atc_1801 Atc_1801 PF13817 Atc_1801 Atc_1802 PF05717 Atc_1802 Atc_1807 PF02627 Carboxymuconolactone decarboxylase family Atc_1808 PF12802 MarR family Atc_1809 PF12840 Helix-turn-helix domain Atc_1813 PF01610 Atc_1813 Atc_1813 PF13542 Atc_1813 Atc_1813 PF14690 Atc_1813 Atc_1814 PF01695 IstB-like ATP binding protein Atc_1815 PF00665 Integrase core domain Atc_1817 PF01609 Transposase DDE domain Atc_1817 PF05598 Atc_1817 Atc_1819 PF00589 Phage integrase family Atc_1820 PF03073 TspO/MBR family Atc_1821 PF01066 CDP-alcohol phosphatidyltransferase Atc_1822 PF01541 GIY-YIG catalytic domain Atc_1822 PF02151 UvrB/uvrC motif Atc_1822 PF08459 UvrC Helix-hairpin-helix N-terminal Atc_1822 PF14520 Helix-hairpin-helix domain Atc_1823 PF06155 Protein of unknown function (DUF971) Atc_1824 PF01132 Elongation factor P (EF-P) OB domain Atc_1824 PF08207 Elongation factor P (EF-P) KOW-like domain Atc_1824 PF09285 Elongation factor P, C-terminal Atc_1825 PF03733 Atc_1825 Atc_1826 PF04977 Septum formation initiator Atc_1827 PF00113 Enolase, C-terminal TIM barrel domain Atc_1827 PF03952 Enolase, N-terminal domain Atc_1828 PF00793 DAHP synthetase I family Atc_1829 PF00117 Glutamine amidotransferase class-I Atc_1829 PF06418 CTP synthase N-terminus Atc_1830 PF00271 Helicase conserved C-terminal domain Atc_1830 PF02151 UvrB/uvrC motif Atc_1830 PF04851 Type III restriction enzyme, res subunit Atc_1830 PF12344 Ultra-violet resistance protein B Atc_1834 PF13358 DDE superfamily endonuclease Atc_1834 PF13518 Helix-turn-helix domain Atc_1834 PF13592 Atc_1834 Atc_1839 PF13481 AAA domain Atc_1842 PF01610 Atc_1842 Atc_1842 PF13542 Atc_1842 Atc_1842 PF14690 Atc_1842 Atc_1843 PF05930 Prophage CP4-57 regulatory protein (AlpA) Atc_1845 PF00589 Phage integrase family Atc_1845 PF13356 Domain of unknown function (DUF4102) Atc_1847 PF13751 Atc_1847 Atc_1851 PF01610 Atc_1851 Atc_1851 PF13542 Atc_1851 Atc_1851 PF14690 Atc_1851 Atc_1854 PF00270 DEAD/DEAH box helicase Atc_1854 PF00271 Helicase conserved C-terminal domain Atc_1855 PF01355 High potential iron-sulfur protein Atc_1856 PF13767 Atc_1856 Atc_1858 PF00117 Glutamine amidotransferase class-I Atc_1860 PF00909 Ammonium Transporter Family Atc_1861 PF00543 Nitrogen regulatory protein P-II Atc_1862 PF07642 Atc_1862 Atc_1864 PF00120 Glutamine synthetase, catalytic domain Atc_1864 PF03951 Glutamine synthetase, beta-Grasp domain Atc_1866 PF00072 Response regulator receiver domain Atc_1866 PF00158 Sigma-54 interaction domain Atc_1866 PF02954 Bacterial regulatory protein, Fis family Atc_1867 PF00512 His Kinase A (phospho-acceptor) domain Atc_1867 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_1867 PF08448 PAS fold Atc_1875 PF08281 Sigma-70, region 4 Atc_1881 PF02583 Metal-sensitive transcriptional repressor Atc_1883 PF00873 AcrB/AcrD/AcrF family Atc_1884 PF16576 Atc_1884 Atc_1885 PF02321 Outer membrane efflux protein Atc_1888 PF00403 Heavy-metal-associated domain Atc_1889 PF03625 Domain of unknown function DUF302 Atc_1890 PF00122 E1-E2 ATPase Atc_1890 PF00403 Heavy-metal-associated domain Atc_1890 PF00702 haloacid dehalogenase-like hydrolase Atc_1893 PF10387 Protein of unknown function (DUF2442) Atc_1894 PF03773 Atc_1894 Atc_1895 PF01022 Bacterial regulatory protein, arsR family Atc_1896 PF04399 Glutaredoxin 2, C terminal domain Atc_1896 PF13417 Glutathione S-transferase, N-terminal domain Atc_1897 PF09851 Atc_1897 Atc_1898 PF13847 Methyltransferase domain Atc_1902 PF00753 Metallo-beta-lactamase superfamily Atc_1903 PF12840 Helix-turn-helix domain Atc_1904 PF07690 Major Facilitator Superfamily Atc_1905 PF02635 DsrE/DsrF-like family Atc_1906 PF02566 OsmC-like protein Atc_1908 PF02683 Atc_1908 Atc_1908 PF11412 Disulphide bond corrector protein DsbC Atc_1908 PF13899 Thioredoxin-like Atc_1909 PF13098 Thioredoxin-like domain Atc_1910 PF13098 Thioredoxin-like domain Atc_1912 PF05114 Protein of unknown function (DUF692) Atc_1914 PF13098 Thioredoxin-like domain Atc_1915 PF00795 Carbon-nitrogen hydrolase Atc_1916 PF00817 impB/mucB/samB family Atc_1916 PF11798 IMS family HHH motif Atc_1916 PF11799 impB/mucB/samB family C-terminal domain Atc_1917 PF00872 Atc_1917 Atc_1918 PF00872 Atc_1918 Atc_1919 PF01548 Atc_1919 Atc_1919 PF02371 Atc_1919 Atc_1920 PF00027 Cyclic nucleotide-binding domain Atc_1920 PF13545 Crp-like helix-turn-helix domain Atc_1921 PF00042 Globin Atc_1922 PF00111 2Fe-2S iron-sulfur cluster binding domain Atc_1922 PF00175 Oxidoreductase NAD-binding domain Atc_1922 PF00970 Oxidoreductase FAD-binding domain Atc_1923 PF13192 Thioredoxin domain Atc_1924 PF01814 Hemerythrin HHE cation binding domain Atc_1925 PF01597 Glycine cleavage H-protein Atc_1926 PF00730 HhH-GPD superfamily base excision DNA repair protein Atc_1928 PF03595 Voltage-dependent anion channel Atc_1929 PF00043 Glutathione S-transferase, C-terminal domain Atc_1929 PF13417 Glutathione S-transferase, N-terminal domain Atc_1931 PF01610 Atc_1931 Atc_1931 PF13542 Atc_1931 Atc_1931 PF14690 Atc_1931 Atc_1932 PF11953 Domain of unknown function (DUF3470) Atc_1934 PF01814 Hemerythrin HHE cation binding domain Atc_1935 PF00384 Molybdopterin oxidoreductase Atc_1935 PF01568 Molydopterin dinucleotide binding domain Atc_1935 PF14710 Respiratory nitrate reductase alpha N-terminal Atc_1936 PF13247 4Fe-4S dicluster domain Atc_1936 PF14711 Respiratory nitrate reductase beta C-terminal Atc_1936A PF02613 Nitrate reductase delta subunit Atc_1937 PF02665 Nitrate reductase gamma subunit Atc_1939 PF07690 Major Facilitator Superfamily Atc_1940 PF04343 Atc_1940 Atc_1941 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_1941 PF14721 Apoptosis-inducing factor, mitochondrion-associated, C-term Atc_1942 PF00529 HlyD family secretion protein Atc_1942 PF16576 Atc_1942 Atc_1943 PF00665 Integrase core domain Atc_1944 PF01610 Atc_1944 Atc_1944 PF13542 Atc_1944 Atc_1944 PF14690 Atc_1944 Atc_1945 PF01695 IstB-like ATP binding protein Atc_1946 PF02321 Outer membrane efflux protein Atc_1947 PF07690 Major Facilitator Superfamily Atc_1948 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atc_1948 PF03466 LysR substrate binding domain Atc_1949 PF05598 Atc_1949 Atc_1953 PF13683 Atc_1953 Atc_1954 PF12706 Beta-lactamase superfamily domain Atc_1955 PF01026 TatD related DNase Atc_1956 PF00588 SpoU rRNA Methylase family Atc_1956 PF08032 RNA 2'-O ribose methyltransferase substrate binding Atc_1958 PF01594 Atc_1958 Atc_1959 PF02811 PHP domain Atc_1961 PF01594 Atc_1961 Atc_1962 PF01593 Flavin containing amine oxidoreductase Atc_1963 PF03734 L,D-transpeptidase catalytic domain Atc_1964 PF00270 DEAD/DEAH box helicase Atc_1964 PF00271 Helicase conserved C-terminal domain Atc_1964 PF17191 Atc_1964 Atc_1965 PF08984 Domain of unknown function (DUF1858) Atc_1966 PF01042 Endoribonuclease L-PSP Atc_1967 PF02824 TGS domain Atc_1967 PF04607 Region found in RelA / SpoT proteins Atc_1967 PF13291 ACT domain Atc_1967 PF13328 HD domain Atc_1968 PF01192 RNA polymerase Rpb6 Atc_1969 PF00625 Guanylate kinase Atc_1970 PF03755 Atc_1970 Atc_1970 PF08340 Atc_1970 Atc_1971 PF03710 Glutamate-ammonia ligase adenylyltransferase Atc_1971 PF08335 GlnD PII-uridylyltransferase Atc_1972 PF01063 Aminotransferase class IV Atc_1973 PF02683 Atc_1973 Atc_1973 PF11412 Disulphide bond corrector protein DsbC Atc_1973 PF13098 Thioredoxin-like domain Atc_1974 PF03091 CutA1 divalent ion tolerance protein Atc_1975 PF00990 GGDEF domain Atc_1975 PF01590 GAF domain Atc_1976 PF01355 High potential iron-sulfur protein Atc_1977 PF01152 Bacterial-like globin Atc_1978 PF11231 Atc_1978 Atc_1979 PF13384 Homeodomain-like domain Atc_1980 PF02537 Atc_1980 Atc_1981 PF02641 Uncharacterized ACR, COG1993 Atc_1982 PF00589 Phage integrase family Atc_1982 PF13356 Domain of unknown function (DUF4102) Atc_1983 PF13711 Atc_1983 Atc_1984 PF10387 Protein of unknown function (DUF2442) Atc_1985 PF12728 Helix-turn-helix domain Atc_1986 PF13362 Toprim domain Atc_1987 PF03288 Poxvirus D5 protein-like Atc_1987 PF08706 Atc_1987 Atc_1993 PF04471 Restriction endonuclease Atc_1997 PF00589 Phage integrase family Atc_1997 PF13356 Domain of unknown function (DUF4102) Atc_1998 PF14239 Atc_1998 Atc_1998 PF14279 Atc_1998 Atc_1999 PF14239 Atc_1999 Atc_1p01 PF03432 Atc_1p01 Atc_1p01 PF16793 Atc_1p01 Atc_1p02 PF05509 Atc_1p02 Atc_1p03 PF07282 Atc_1p03 Atc_1p04 PF01797 Transposase IS200 like Atc_1p05 PF06504 Atc_1p05 Atc_1p06 PF13481 AAA domain Atc_1p08 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_1p10 PF01402 Ribbon-helix-helix protein, copG family Atc_2002 PF14243 Atc_2002 Atc_2005 PF13098 Thioredoxin-like domain Atc_2006 PF01610 Atc_2006 Atc_2006 PF13542 Atc_2006 Atc_2006 PF14690 Atc_2006 Atc_2007 PF00270 DEAD/DEAH box helicase Atc_2007 PF00271 Helicase conserved C-terminal domain Atc_2007 PF17191 Atc_2007 Atc_2009 PF01553 Acyltransferase Atc_2010 PF04307 Atc_2010 Atc_2014 PF01695 IstB-like ATP binding protein Atc_2015 PF07120 Atc_2015 Atc_2018 PF07514 Putative helicase Atc_2019 PF10412 Type IV secretion-system coupling protein DNA-binding domain Atc_2019 PF12696 TraM recognition site of TraD and TraG Atc_2021 PF14348 Atc_2021 Atc_2022 PF08346 Atc_2022 Atc_2023 PF05063 Atc_2023 Atc_2026 PF00437 Type II/IV secretion system protein Atc_2027 PF01435 Peptidase family M48 Atc_2028 PF05101 Atc_2028 Atc_2029 PF03135 Atc_2029 Atc_2030 PF01610 Atc_2030 Atc_2030 PF13542 Atc_2030 Atc_2030 PF14690 Atc_2030 Atc_2033 PF01610 Atc_2033 Atc_2033 PF13542 Atc_2033 Atc_2033 PF14690 Atc_2033 Atc_2034 PF04610 Atc_2034 Atc_2037 PF04335 VirB8 protein Atc_2038 PF03524 Conjugal transfer protein Atc_2039 PF03743 Bacterial conjugation TrbI-like protein Atc_2040 PF01464 Transglycosylase SLT domain Atc_2041 PF10671 Toxin co-regulated pilus biosynthesis protein Q Atc_2042 PF00263 Atc_2042 Atc_2045 PF00437 Type II/IV secretion system protein Atc_2046 PF00482 Type II secretion system (T2SS), protein F Atc_2054 PF00437 Type II/IV secretion system protein Atc_2055 PF01610 Atc_2055 Atc_2055 PF13542 Atc_2055 Atc_2055 PF14690 Atc_2055 Atc_2059 PF01464 Transglycosylase SLT domain Atc_2060 PF00563 EAL domain Atc_2064 PF01610 Atc_2064 Atc_2064 PF13542 Atc_2064 Atc_2064 PF14690 Atc_2064 Atc_2066 PF05280 Flagellar transcriptional activator (FlhC) Atc_2068 PF02195 ParB-like nuclease domain Atc_2072 PF04221 RelB antitoxin Atc_2073 PF15738 Atc_2073 Atc_2074 PF01548 Atc_2074 Atc_2074 PF02371 Atc_2074 Atc_2077 PF00856 SET domain Atc_2078 PF00857 Isochorismatase family Atc_2080 PF07669 Eco57I restriction-modification methylase Atc_2081 PF00872 Atc_2081 Atc_2083 PF06616 BsuBI/PstI restriction endonuclease C-terminus Atc_2084 PF01381 Helix-turn-helix Atc_2085 PF01695 IstB-like ATP binding protein Atc_2086 PF00665 Integrase core domain Atc_2087 PF13361 UvrD-like helicase C-terminal domain Atc_2094 PF01464 Transglycosylase SLT domain Atc_2096 PF13091 PLD-like domain Atc_2099 PF00436 Single-strand binding protein family Atc_2100 PF01610 Atc_2100 Atc_2100 PF13542 Atc_2100 Atc_2100 PF14690 Atc_2100 Atc_2101 PF01610 Atc_2101 Atc_2101 PF13542 Atc_2101 Atc_2101 PF14690 Atc_2101 Atc_2104 PF00665 Integrase core domain Atc_2104 PF13936 Helix-turn-helix domain Atc_2105 PF01695 IstB-like ATP binding protein Atc_2105 PF08483 Atc_2105 Atc_2108 PF13476 AAA domain Atc_2113 PF01610 Atc_2113 Atc_2113 PF13542 Atc_2113 Atc_2113 PF14690 Atc_2113 Atc_2120 PF00268 Ribonucleotide reductase, small chain Atc_2122 PF02195 ParB-like nuclease domain Atc_2124 PF14454 Atc_2124 Atc_2125 PF14456 Atc_2125 Atc_2126 PF14460 Atc_2126 Atc_2127 PF00899 ThiF family Atc_2130 PF00271 Helicase conserved C-terminal domain Atc_2134 PF01610 Atc_2134 Atc_2134 PF13542 Atc_2134 Atc_2134 PF14690 Atc_2134 Atc_2137 PF02195 ParB-like nuclease domain Atc_2139 PF08273 Zinc-binding domain of primase-helicase Atc_2139 PF13362 Toprim domain Atc_2141 PF13432 Tetratricopeptide repeat Atc_2142 PF02321 Outer membrane efflux protein Atc_2143 PF16576 Atc_2143 Atc_2144 PF00873 AcrB/AcrD/AcrF family Atc_2145 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Atc_2145 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Atc_2146 PF02503 Polyphosphate kinase middle domain Atc_2146 PF13089 Polyphosphate kinase N-terminal domain Atc_2146 PF13090 Polyphosphate kinase C-terminal domain Atc_2147 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_2148 PF01928 CYTH domain Atc_2148 PF05235 CHAD domain Atc_2150 PF01433 Peptidase family M1 Atc_2150 PF11940 Domain of unknown function (DUF3458) Atc_2150 PF17432 Atc_2150 Atc_2151 PF10411 Disulfide bond isomerase protein N-terminus Atc_2151 PF13098 Thioredoxin-like domain Atc_2152 PF00004 ATPase family associated with various cellular activities (AAA) Atc_2152 PF02861 Clp amino terminal domain Atc_2152 PF07724 AAA domain (Cdc48 subfamily) Atc_2152 PF10431 C-terminal, D2-small domain, of ClpB protein Atc_2153 PF12832 MFS_1 like family Atc_2154 PF01264 Chorismate synthase Atc_2155 PF02649 Type I GTP cyclohydrolase folE2 Atc_2156 PF02779 Transketolase, pyrimidine binding domain Atc_2156 PF02780 Transketolase, C-terminal domain Atc_2156 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Atc_2157 PF00348 Polyprenyl synthetase Atc_2158 PF02609 Exonuclease VII small subunit Atc_2159 PF02355 Protein export membrane protein Atc_2159 PF07549 SecD/SecF GG Motif Atc_2160 PF02355 Protein export membrane protein Atc_2160 PF07549 SecD/SecF GG Motif Atc_2160 PF13721 SecD export protein N-terminal TM region Atc_2161 PF02699 Preprotein translocase subunit Atc_2162 PF01702 Queuine tRNA-ribosyltransferase Atc_2163 PF02547 Queuosine biosynthesis protein Atc_2164 PF00571 CBS domain Atc_2164 PF01595 Atc_2164 Atc_2164 PF03471 Transporter associated domain Atc_2165 PF00571 CBS domain Atc_2166 PF01053 Cys/Met metabolism PLP-dependent enzyme Atc_2167 PF00156 Phosphoribosyl transferase domain Atc_2167 PF13537 Glutamine amidotransferase domain Atc_2168 PF02674 Atc_2168 Atc_2169 PF08245 Mur ligase middle domain Atc_2170 PF01039 Carboxyl transferase domain Atc_2171 PF00290 Tryptophan synthase alpha chain Atc_2172 PF00291 Pyridoxal-phosphate dependent enzyme Atc_2173 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Atc_2174 PF01416 tRNA pseudouridine synthase Atc_2176 PF01118 Semialdehyde dehydrogenase, NAD binding domain Atc_2176 PF02774 Semialdehyde dehydrogenase, dimerisation domain Atc_2177 PF00180 Isocitrate/isopropylmalate dehydrogenase Atc_2179 PF12804 MobA-like NTP transferase domain Atc_2180 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Atc_2181 PF00994 Probable molybdopterin binding domain Atc_2181 PF03453 MoeA N-terminal region (domain I and II) Atc_2181 PF03454 MoeA C-terminal region (domain IV) Atc_2182 PF13091 PLD-like domain Atc_2185 PF13419 Haloacid dehalogenase-like hydrolase Atc_2186 PF00875 DNA photolyase Atc_2186 PF03441 FAD binding domain of DNA photolyase Atc_2188 PF02322 Atc_2188 Atc_2189 PF01654 Atc_2189 Atc_2190 PF03843 Atc_2190 Atc_2191 PF12698 ABC-2 family transporter protein Atc_2192 PF12698 ABC-2 family transporter protein Atc_2193 PF00005 ABC transporter Atc_2194 PF16576 Atc_2194 Atc_2195 PF07690 Major Facilitator Superfamily Atc_2196 PF00582 Universal stress protein family Atc_2197 PF00324 Amino acid permease Atc_2198 PF02769 AIR synthase related protein, C-terminal domain Atc_2198 PF13507 CobB/CobQ-like glutamine amidotransferase domain Atc_2199 PF01259 SAICAR synthetase Atc_2200 PF00206 Lyase Atc_2200 PF10397 Adenylosuccinate lyase C-terminus Atc_2201 PF06804 NlpB/DapX lipoprotein Atc_2202 PF00701 Dihydrodipicolinate synthetase family Atc_2203 PF12146 Putative lysophospholipase Atc_2204 PF00166 Chaperonin 10 Kd subunit Atc_2205 PF00118 TCP-1/cpn60 chaperonin family Atc_2206 PF00156 Phosphoribosyl transferase domain Atc_2207 PF01583 Adenylylsulphate kinase Atc_2207 PF01747 ATP-sulfurylase Atc_2207 PF14306 PUA-like domain Atc_2208 PF05670 Atc_2208 Atc_2209 PF01578 Atc_2209 Atc_2213 PF05140 Atc_2213 Atc_2215 PF02872 5'-nucleotidase, C-terminal domain Atc_2216 PF08770 Sulphur oxidation protein SoxZ Atc_2217 PF13501 Sulfur oxidation protein SoxY Atc_2220 PF00510 Cytochrome c oxidase subunit III Atc_2221 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atc_2222 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Atc_2222 PF06481 COX Aromatic Rich Motif Atc_2223 PF01695 IstB-like ATP binding protein Atc_2224 PF00665 Integrase core domain Atc_2225 PF02036 SCP-2 sterol transfer family Atc_2226 PF02637 GatB domain Atc_2226 PF02934 GatB/GatE catalytic domain Atc_2227 PF01425 Amidase Atc_2228 PF02686 Glu-tRNAGln amidotransferase C subunit Atc_2229 PF04333 Atc_2229 Atc_2230 PF05494 Toluene tolerance, Ttg2 Atc_2231 PF04055 Radical SAM superfamily Atc_2231 PF11946 Atc_2231 Atc_2233 PF03706 Atc_2233 Atc_2234 PF03176 MMPL family Atc_2235 PF04794 YdjC-like protein Atc_2236 PF04055 Radical SAM superfamily Atc_2237 PF13506 Glycosyl transferase family 21 Atc_2238 PF01370 NAD dependent epimerase/dehydratase family Atc_2239 PF01048 Phosphorylase superfamily Atc_2240 PF13243 Prenyltransferase-like Atc_2240 PF13249 Prenyltransferase-like Atc_2241 PF00494 Squalene/phytoene synthase Atc_2242 PF00005 ABC transporter Atc_2243 PF02687 Atc_2243 Atc_2243 PF12704 MacB-like periplasmic core domain Atc_2244 PF07143 Hydroxyneurosporene synthase (CrtC) Atc_2244 PF17186 Atc_2244 Atc_2246 PF00899 ThiF family Atc_2248 PF03372 Endonuclease/Exonuclease/phosphatase family Atc_2249 PF02405 Atc_2249 Atc_2250 PF00005 ABC transporter Atc_2251 PF02321 Outer membrane efflux protein Atc_2252 PF00425 chorismate binding enzyme Atc_2252 PF04715 Anthranilate synthase component I, N terminal region Atc_2253 PF00128 Alpha amylase, catalytic domain Atc_2253 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Atc_2254 PF03706 Atc_2254 Atc_2259 PF06769 Plasmid encoded toxin Txe Atc_2260 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Atc_2261 PF00140 Sigma-70 factor, region 1 Atc_2261 PF03979 Sigma-70 factor, region 1 Atc_2261 PF04539 Sigma-70 region 3 Atc_2261 PF04542 Sigma-70 region 2 Atc_2261 PF04545 Sigma-70, region 4 Atc_2261 PF04546 Sigma-70, non-essential region Atc_2262 PF01807 CHC2 zinc finger Atc_2262 PF08275 DNA primase catalytic core, N-terminal domain Atc_2262 PF10410 DnaB-helicase binding domain of primase Atc_2262 PF13155 Toprim-like Atc_2263 PF00488 MutS domain V Atc_2263 PF01713 Smr domain Atc_2264 PF09424 Yqey-like protein Atc_2265 PF01165 Ribosomal protein S21 Atc_2266 PF04542 Sigma-70 region 2 Atc_2266 PF04545 Sigma-70, region 4 Atc_2267 PF01725 Ham1 family Atc_2268 PF01138 3' exoribonuclease family, domain 1 Atc_2268 PF03725 3' exoribonuclease family, domain 2 Atc_2269 PF04338 Protein of unknown function, DUF481 Atc_2270 PF00183 Hsp90 protein Atc_2270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_2271 PF04241 Atc_2271 Atc_2272 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family Atc_2272 PF13460 NADH(P)-binding Atc_2273 PF08238 Sel1 repeat Atc_2274 PF13632 Glycosyl transferase family group 2 Atc_2276 PF04349 Periplasmic glucan biosynthesis protein, MdoG Atc_2277 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atc_2277 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_2278 PF02230 Phospholipase/Carboxylesterase Atc_2280 PF00158 Sigma-54 interaction domain Atc_2281 PF01654 Atc_2281 Atc_2282 PF02322 Atc_2282 Atc_2287 PF01964 ThiC family Atc_2287 PF13667 ThiC-associated domain Atc_2289 PF01814 Hemerythrin HHE cation binding domain Atc_2289 PF10006 Atc_2289 Atc_2290 PF06146 Atc_2290 Atc_2291 PF01430 Hsp33 protein Atc_2292 PF01171 PP-loop family Atc_2293 PF00294 pfkB family carbohydrate kinase Atc_2294 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Atc_2294 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Atc_2294 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Atc_2295 PF01648 4'-phosphopantetheinyl transferase superfamily Atc_2296 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Atc_2297 PF02565 Recombination protein O C terminal Atc_2297 PF11967 Recombination protein O N terminal Atc_2298 PF01926 50S ribosome-binding GTPase Atc_2298 PF07650 KH domain Atc_2299 PF00035 Double-stranded RNA binding motif Atc_2299 PF14622 Ribonuclease-III-like Atc_2300 PF16137 Atc_2300 Atc_2301 PF00717 Peptidase S24-like Atc_2301 PF10502 Signal peptidase, peptidase S26 Atc_2302 PF00009 Elongation factor Tu GTP binding domain Atc_2302 PF00679 Elongation factor G C-terminus Atc_2302 PF03144 Elongation factor Tu domain 2 Atc_2302 PF06421 GTP-binding protein LepA C-terminus Atc_2303 PF13180 PDZ domain Atc_2303 PF13365 Trypsin-like peptidase domain Atc_2305 PF04542 Sigma-70 region 2 Atc_2305 PF08281 Sigma-70, region 4 Atc_2306 PF00890 FAD binding domain Atc_2306 PF02910 Fumarate reductase flavoprotein C-term Atc_2307 PF01571 Aminomethyltransferase folate-binding domain Atc_2309 PF00005 ABC transporter Atc_2310 PF00005 ABC transporter Atc_2310 PF00664 ABC transporter transmembrane region Atc_2311 PF08495 Atc_2311 Atc_2311 PF10442 Atc_2311 Atc_2313 PF13302 Acetyltransferase (GNAT) domain Atc_2314 PF00009 Elongation factor Tu GTP binding domain Atc_2314 PF03144 Elongation factor Tu domain 2 Atc_2314 PF16658 Atc_2314 Atc_2315 PF00583 Acetyltransferase (GNAT) family Atc_2316 PF00814 Glycoprotease family Atc_2317 PF06733 DEAD_2 Atc_2317 PF13307 Helicase C-terminal domain Atc_2318 PF01578 Atc_2318 Atc_2319 PF00877 NlpC/P60 family Atc_2320 PF13098 Thioredoxin-like domain Atc_2323 PF00795 Carbon-nitrogen hydrolase Atc_2324 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Atc_2325 PF09335 Atc_2325 Atc_2328 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atc_2328 PF03466 LysR substrate binding domain Atc_2330 PF00248 Aldo/keto reductase family Atc_2331 PF00850 Histone deacetylase domain Atc_2333 PF07728 AAA domain (dynein-related subfamily) Atc_2333 PF08406 Atc_2333 Atc_2339 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Atc_2340 PF04055 Radical SAM superfamily Atc_2341 PF01494 FAD binding domain Atc_2341 PF05834 Atc_2341 Atc_2341 PF12831 FAD dependent oxidoreductase Atc_2343 PF04055 Radical SAM superfamily Atc_2344 PF01597 Glycine cleavage H-protein Atc_2345 PF02635 DsrE/DsrF-like family Atc_2346 PF01597 Glycine cleavage H-protein Atc_2347 PF02754 Atc_2347 Atc_2348 PF13534 4Fe-4S dicluster domain Atc_2350 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_2351 PF02754 Atc_2351 Atc_2352 PF13183 4Fe-4S dicluster domain Atc_2353 PF13686 DsrE/DsrF/DrsH-like family Atc_2354 PF01206 Sulfurtransferase TusA Atc_2355 PF00581 Rhodanese-like domain Atc_2356 PF04055 Radical SAM superfamily Atc_2356 PF06463 Molybdenum Cofactor Synthesis C Atc_2356 PF13353 4Fe-4S single cluster domain Atc_2357 PF04976 Atc_2357 Atc_2358 PF13247 4Fe-4S dicluster domain Atc_2359 PF00384 Molybdopterin oxidoreductase Atc_2359 PF01568 Molydopterin dinucleotide binding domain Atc_2359 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atc_2361 PF01967 MoaC family Atc_2362 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein Atc_2363 PF00512 His Kinase A (phospho-acceptor) domain Atc_2363 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_2364 PF00072 Response regulator receiver domain Atc_2364 PF00158 Sigma-54 interaction domain Atc_2364 PF02954 Bacterial regulatory protein, Fis family Atc_2365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Atc_2366 PF13501 Sulfur oxidation protein SoxY Atc_2367 PF08770 Sulphur oxidation protein SoxZ Atc_2369 PF03625 Domain of unknown function DUF302 Atc_2370 PF02872 5'-nucleotidase, C-terminal domain Atc_2371 PF06723 MreB/Mbl protein Atc_2372 PF04085 rod shape-determining protein MreC Atc_2373 PF04093 Atc_2373 Atc_2374 PF00905 Penicillin binding protein transpeptidase domain Atc_2374 PF03717 Penicillin-binding Protein dimerisation domain Atc_2375 PF01098 Atc_2375 Atc_2376 PF00768 D-alanyl-D-alanine carboxypeptidase Atc_2376 PF07943 Penicillin-binding protein 5, C-terminal domain Atc_2377 PF04359 Protein of unknown function (DUF493) Atc_2378 PF03099 Biotin/lipoate A/B protein ligase family Atc_2379 PF04055 Radical SAM superfamily Atc_2379 PF16881 Atc_2379 Atc_2380 PF02698 DUF218 domain Atc_2381 PF03734 L,D-transpeptidase catalytic domain Atc_2385 PF03029 Conserved hypothetical ATP binding protein Atc_2387 PF03259 Roadblock/LC7 domain Atc_2388 PF02091 Glycyl-tRNA synthetase alpha subunit Atc_2389 PF02092 Atc_2389 Atc_2389 PF05746 DALR anticodon binding domain Atc_2390 PF13242 HAD-hyrolase-like Atc_2391 PF08443 RimK-like ATP-grasp domain Atc_2393 PF02754 Atc_2393 Atc_2396 PF08534 Redoxin Atc_2397 PF01329 Pterin 4 alpha carbinolamine dehydratase Atc_2398 PF02677 Atc_2398 Atc_2400 PF01510 N-acetylmuramoyl-L-alanine amidase Atc_2401 PF00085 Thioredoxin Atc_2402 PF00578 AhpC/TSA family Atc_2402 PF10417 C-terminal domain of 1-Cys peroxiredoxin Atc_2403 PF00682 HMGL-like Atc_2403 PF08502 LeuA allosteric (dimerisation) domain Atc_2405 PF03618 Atc_2405 Atc_2407 PF00593 TonB dependent receptor Atc_2407 PF07715 TonB-dependent Receptor Plug Domain Atc_2408 PF04185 Phosphoesterase family Atc_2411 PF01609 Transposase DDE domain Atc_2411 PF05598 Atc_2411 Atc_2412 PF02754 Atc_2412 Atc_2412 PF12838 4Fe-4S dicluster domain Atc_2413 PF01565 FAD binding domain Atc_2413 PF02913 FAD linked oxidases, C-terminal domain Atc_2414 PF01565 FAD binding domain Atc_2414 PF02913 FAD linked oxidases, C-terminal domain Atc_2415 PF07005 Protein of unknown function, DUF1537 Atc_2415 PF17042 Atc_2415 Atc_2416 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Atc_2416 PF09364 XFP N-terminal domain Atc_2417 PF01614 Bacterial transcriptional regulator Atc_2417 PF09339 IclR helix-turn-helix domain Atc_2418 PF07690 Major Facilitator Superfamily Atc_2420 PF00158 Sigma-54 interaction domain Atc_2420 PF08448 PAS fold Atc_2420 PF13384 Homeodomain-like domain Atc_2421 PF13686 DsrE/DsrF/DrsH-like family Atc_2422 PF01206 Sulfurtransferase TusA Atc_2423 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_2426 PF01327 Polypeptide deformylase Atc_2427 PF13740 ACT domain Atc_2428 PF00596 Class II Aldolase and Adducin N-terminal domain Atc_2429 PF12710 haloacid dehalogenase-like hydrolase Atc_2430 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Atc_2431 PF03079 ARD/ARD' family Atc_2432 PF02578 Multi-copper polyphenol oxidoreductase laccase Atc_2433 PF00849 RNA pseudouridylate synthase Atc_2434 PF13525 Outer membrane lipoprotein Atc_2435 PF00543 Nitrogen regulatory protein P-II Atc_2436 PF00795 Carbon-nitrogen hydrolase Atc_2436 PF02540 NAD synthase Atc_2437 PF00549 CoA-ligase Atc_2437 PF02629 CoA binding domain Atc_2439 PF00549 CoA-ligase Atc_2439 PF08442 ATP-grasp domain Atc_2440 PF00180 Isocitrate/isopropylmalate dehydrogenase Atc_2441 PF00330 Aconitase family (aconitate hydratase) Atc_2441 PF00694 Aconitase C-terminal domain Atc_2442 PF00916 Atc_2442 Atc_2442 PF01740 STAS domain Atc_2443 PF00749 tRNA synthetases class I (E and Q), catalytic domain Atc_2444 PF01464 Transglycosylase SLT domain Atc_2444 PF01476 LysM domain Atc_2445 PF13561 Enoyl-(Acyl carrier protein) reductase Atc_2446 PF00923 Transaldolase Atc_2447 PF11127 Protein of unknown function (DUF2892) Atc_2448 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Atc_2449 PF00149 Calcineurin-like phosphoesterase Atc_2450 PF00696 Amino acid kinase family Atc_2450 PF01842 ACT domain Atc_2450 PF13840 ACT domain Atc_2451 PF00202 Aminotransferase class-III Atc_2452 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Atc_2452 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Atc_2453 PF00764 Arginosuccinate synthase Atc_2454 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atc_2455 PF00929 Exonuclease Atc_2456 PF00075 RNase H Atc_2457 PF08241 Methyltransferase domain Atc_2459 PF00675 Insulinase (Peptidase family M16) Atc_2459 PF05193 Peptidase M16 inactive domain Atc_2460 PF00013 KH domain Atc_2460 PF00575 S1 RNA binding domain Atc_2460 PF01138 3' exoribonuclease family, domain 1 Atc_2460 PF03725 3' exoribonuclease family, domain 2 Atc_2460 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Atc_2461 PF00312 Ribosomal protein S15 Atc_2462 PF01509 TruB family pseudouridylate synthase (N terminal domain) Atc_2462 PF09157 Pseudouridine synthase II TruB, C-terminal Atc_2462 PF16198 Atc_2462 Atc_2463 PF02033 Ribosome-binding factor A Atc_2464 PF00009 Elongation factor Tu GTP binding domain Atc_2464 PF04760 Translation initiation factor IF-2, N-terminal region Atc_2464 PF08364 Atc_2464 Atc_2464 PF11987 Translation-initiation factor 2 Atc_2465 PF00575 S1 RNA binding domain Atc_2465 PF08529 NusA N-terminal domain Atc_2465 PF13184 NusA-like KH domain Atc_2465 PF14520 Helix-hairpin-helix domain Atc_2467 PF02576 Uncharacterised BCR, YhbC family COG0779 Atc_2467 PF17384 Atc_2467 Atc_2469 PF00005 ABC transporter Atc_2470 PF02517 CAAX protease self-immunity Atc_2472 PF03734 L,D-transpeptidase catalytic domain Atc_2473 PF07073 Modulator of Rho-dependent transcription termination (ROF) Atc_2474 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atc_2474 PF02403 Seryl-tRNA synthetase N-terminal domain Atc_2475 PF05496 Holliday junction DNA helicase ruvB N-terminus Atc_2475 PF12002 MgsA AAA+ ATPase C terminal Atc_2475 PF16193 Atc_2475 Atc_2476 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Atc_2477 PF03548 Outer membrane lipoprotein carrier protein LolA Atc_2478 PF01580 FtsK/SpoIIIE family Atc_2478 PF09397 Ftsk gamma domain Atc_2478 PF13491 Atc_2478 Atc_2479 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_2481 PF01713 Smr domain Atc_2482 PF00376 MerR family regulatory protein Atc_2482 PF09278 MerR, DNA binding Atc_2483 PF01142 tRNA pseudouridine synthase D (TruD) Atc_2484 PF02542 YgbB family Atc_2485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Atc_2486 PF00270 DEAD/DEAH box helicase Atc_2486 PF00271 Helicase conserved C-terminal domain Atc_2486 PF02559 CarD-like/TRCF domain Atc_2486 PF03461 TRCF domain Atc_2487 PF12710 haloacid dehalogenase-like hydrolase Atc_2488 PF00462 Glutaredoxin Atc_2488 PF08534 Redoxin Atc_2489 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atc_2489 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_2490 PF01048 Phosphorylase superfamily Atc_2491 PF00156 Phosphoribosyl transferase domain Atc_2492 PF02635 DsrE/DsrF-like family Atc_2493 PF12732 Atc_2493 Atc_2495 PF01219 Prokaryotic diacylglycerol kinase Atc_2496 PF04002 RadC-like JAB domain Atc_2497 PF02441 Flavoprotein Atc_2497 PF04127 DNA / pantothenate metabolism flavoprotein Atc_2498 PF00692 dUTPase Atc_2499 PF03350 Atc_2499 Atc_2500 PF00692 dUTPase Atc_2501 PF01883 Domain of unknown function DUF59 Atc_2501 PF10609 ParA/MinD ATPase like Atc_2502 PF03992 Antibiotic biosynthesis monooxygenase Atc_2503 PF01113 Dihydrodipicolinate reductase, N-terminus Atc_2503 PF05173 Dihydrodipicolinate reductase, C-terminus Atc_2504 PF00226 DnaJ domain Atc_2504 PF00684 DnaJ central domain Atc_2504 PF01556 DnaJ C terminal domain Atc_2505 PF00012 Hsp70 protein Atc_2506 PF01025 GrpE Atc_2507 PF01628 HrcA protein C terminal domain Atc_2508 PF00471 Ribosomal protein L33 Atc_2509 PF00830 Ribosomal L28 family Atc_2510 PF04244 Deoxyribodipyrimidine photo-lyase-related protein Atc_2511 PF01593 Flavin containing amine oxidoreductase Atc_2512 PF07103 Atc_2512 Atc_2513 PF02353 Mycolic acid cyclopropane synthetase Atc_2514 PF16036 Atc_2514 Atc_2515 PF13347 MFS/sugar transport protein Atc_2516 PF12915 Atc_2516 Atc_2517 PF13561 Enoyl-(Acyl carrier protein) reductase Atc_2518 PF00501 AMP-binding enzyme Atc_2520 PF00989 PAS fold Atc_2521 PF13411 MerR HTH family regulatory protein Atc_2523 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_2526 PF12915 Atc_2526 Atc_2527 PF00106 short chain dehydrogenase Atc_2528 PF01161 Phosphatidylethanolamine-binding protein Atc_2529 PF00268 Ribonucleotide reductase, small chain Atc_2530 PF00317 Ribonucleotide reductase, all-alpha domain Atc_2530 PF02867 Ribonucleotide reductase, barrel domain Atc_2530 PF03477 ATP cone domain Atc_2531 PF01523 Putative modulator of DNA gyrase Atc_2532 PF00004 ATPase family associated with various cellular activities (AAA) Atc_2532 PF01434 Peptidase family M41 Atc_2532 PF06480 FtsH Extracellular Atc_2533 PF00809 Pterin binding enzyme Atc_2534 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Atc_2534 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atc_2534 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atc_2534 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atc_2535 PF00121 Triosephosphate isomerase Atc_2536 PF03840 Preprotein translocase SecG subunit Atc_2538 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Atc_2539 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Atc_2540 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Atc_2541 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Atc_2542 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Atc_2543 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atc_2543 PF10531 SLBB domain Atc_2543 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Atc_2544 PF00384 Molybdopterin oxidoreductase Atc_2544 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atc_2544 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Atc_2544 PF13510 2Fe-2S iron-sulfur cluster binding domain Atc_2545 PF00146 NADH dehydrogenase Atc_2546 PF12838 4Fe-4S dicluster domain Atc_2547 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Atc_2548 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atc_2549 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atc_2549 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atc_2550 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atc_2551 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atc_2552 PF10993 Atc_2552 Atc_2553 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atc_2553 PF02824 TGS domain Atc_2553 PF03129 Anticodon binding domain Atc_2553 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atc_2554 PF00707 Translation initiation factor IF-3, C-terminal domain Atc_2554 PF05198 Translation initiation factor IF-3, N-terminal domain Atc_2555 PF01632 Ribosomal protein L35 Atc_2556 PF00453 Ribosomal protein L20 Atc_2557 PF01409 tRNA synthetases class II core domain (F) Atc_2557 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Atc_2558 PF01588 Putative tRNA binding domain Atc_2558 PF03147 Ferredoxin-fold anticodon binding domain Atc_2558 PF03483 B3/4 domain Atc_2558 PF03484 tRNA synthetase B5 domain Atc_2559 PF00216 Bacterial DNA-binding protein Atc_2560 PF13411 MerR HTH family regulatory protein Atc_2561 PF00005 ABC transporter Atc_2561 PF09821 Atc_2561 Atc_2562 PF00528 Binding-protein-dependent transport system inner membrane component Atc_2563 PF00224 Pyruvate kinase, barrel domain Atc_2565 PF13441 Atc_2565 Atc_2566 PF11583 P-aminobenzoate N-oxygenase AurF Atc_2568 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Atc_2569 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Atc_2570 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Atc_2570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Atc_2571 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Atc_2572 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atc_2572 PF10531 SLBB domain Atc_2572 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Atc_2573 PF00384 Molybdopterin oxidoreductase Atc_2573 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atc_2573 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Atc_2573 PF13510 2Fe-2S iron-sulfur cluster binding domain Atc_2574 PF00146 NADH dehydrogenase Atc_2575 PF12838 4Fe-4S dicluster domain Atc_2576 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Atc_2577 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atc_2578 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atc_2578 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atc_2579 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atc_2580 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atc_2582 PF02353 Mycolic acid cyclopropane synthetase Atc_2583 PF00300 Histidine phosphatase superfamily (branch 1) Atc_2584 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) Atc_2587 PF01475 Ferric uptake regulator family Atc_2588 PF04355 SmpA / OmlA family Atc_2589 PF03364 Polyketide cyclase / dehydrase and lipid transport Atc_2590 PF13091 PLD-like domain Atc_2591 PF01668 SmpB protein Atc_2592 PF13231 Atc_2592 Atc_2593 PF13098 Thioredoxin-like domain Atc_2594 PF02222 ATP-grasp domain Atc_2595 PF00731 AIR carboxylase Atc_2597 PF02390 Putative methyltransferase Atc_2598 PF00027 Cyclic nucleotide-binding domain Atc_2598 PF13545 Crp-like helix-turn-helix domain Atc_2599 PF00753 Metallo-beta-lactamase superfamily Atc_2601 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_2603 PF00535 Glycosyl transferase family 2 Atc_2604 PF00437 Type II/IV secretion system protein Atc_2605 PF00437 Type II/IV secretion system protein Atc_2606 PF01168 Alanine racemase, N-terminal domain Atc_2607 PF03807 NADP oxidoreductase coenzyme F420-dependent Atc_2607 PF14748 Pyrroline-5-carboxylate reductase dimerisation Atc_2608 PF02325 Atc_2608 Atc_2609 PF02594 Uncharacterised ACR, YggU family COG1872 Atc_2610 PF04055 Radical SAM superfamily Atc_2610 PF06968 Biotin and Thiamin Synthesis associated domain Atc_2611 PF09411 Lipid A 3-O-deacylase (PagL) Atc_2612 PF00529 HlyD family secretion protein Atc_2612 PF13533 Biotin-lipoyl like Atc_2612 PF16576 Atc_2612 Atc_2613 PF13419 Haloacid dehalogenase-like hydrolase Atc_2614 PF00696 Amino acid kinase family Atc_2615 PF00440 Bacterial regulatory proteins, tetR family Atc_2617 PF12674 Atc_2617 Atc_2619 PF00111 2Fe-2S iron-sulfur cluster binding domain Atc_2619 PF00175 Oxidoreductase NAD-binding domain Atc_2619 PF00970 Oxidoreductase FAD-binding domain Atc_2620 PF00929 Exonuclease Atc_2621 PF03649 Atc_2621 Atc_2622 PF04376 Atc_2622 Atc_2622 PF04377 Atc_2622 Atc_2623 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Atc_2624 PF01435 Peptidase family M48 Atc_2625 PF13500 AAA domain Atc_2626 PF08241 Methyltransferase domain Atc_2627 PF12697 Alpha/beta hydrolase family Atc_2628 PF00155 Aminotransferase class I and II Atc_2629 PF00156 Phosphoribosyl transferase domain Atc_2630 PF00588 SpoU rRNA Methylase family Atc_2631 PF00083 Sugar (and other) transporter Atc_2632 PF03781 Sulfatase-modifying factor enzyme 1 Atc_2632 PF08241 Methyltransferase domain Atc_2632 PF12867 DinB superfamily Atc_2633 PF00155 Aminotransferase class I and II Atc_2634 PF13350 Tyrosine phosphatase family Atc_2635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Atc_2636 PF00535 Glycosyl transferase family 2 Atc_2637 PF13641 Glycosyltransferase like family 2 Atc_2638 PF04932 Atc_2638 Atc_2639 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Atc_2640 PF13439 Glycosyltransferase Family 4 Atc_2640 PF13692 Glycosyl transferases group 1 Atc_2641 PF01522 Polysaccharide deacetylase Atc_2642 PF00535 Glycosyl transferase family 2 Atc_2643 PF00293 NUDIX domain Atc_2643 PF02581 Thiamine monophosphate synthase/TENI Atc_2644 PF01960 ArgJ family Atc_2645 PF01043 SecA preprotein cross-linking domain Atc_2645 PF02810 SEC-C motif Atc_2645 PF07516 SecA Wing and Scaffold domain Atc_2645 PF07517 SecA DEAD-like domain Atc_2646 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Atc_2647 PF13410 Glutathione S-transferase, C-terminal domain Atc_2647 PF13417 Glutathione S-transferase, N-terminal domain Atc_2648 PF00501 AMP-binding enzyme Atc_2650 PF02381 MraZ protein Atc_2651 PF01795 MraW methylase family Atc_2652 PF04999 Atc_2652 Atc_2654 PF00905 Penicillin binding protein transpeptidase domain Atc_2654 PF03717 Penicillin-binding Protein dimerisation domain Atc_2655 PF01225 Mur ligase family, catalytic domain Atc_2655 PF02875 Mur ligase family, glutamate ligase domain Atc_2655 PF08245 Mur ligase middle domain Atc_2656 PF01225 Mur ligase family, catalytic domain Atc_2656 PF02875 Mur ligase family, glutamate ligase domain Atc_2656 PF08245 Mur ligase middle domain Atc_2657 PF00953 Glycosyl transferase family 4 Atc_2657 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Atc_2658 PF08245 Mur ligase middle domain Atc_2659 PF01098 Atc_2659 Atc_2660 PF03033 Glycosyltransferase family 28 N-terminal domain Atc_2660 PF04101 Glycosyltransferase family 28 C-terminal domain Atc_2661 PF01225 Mur ligase family, catalytic domain Atc_2661 PF02875 Mur ligase family, glutamate ligase domain Atc_2661 PF08245 Mur ligase middle domain Atc_2662 PF01565 FAD binding domain Atc_2662 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Atc_2663 PF01820 D-ala D-ala ligase N-terminus Atc_2663 PF07478 D-ala D-ala ligase C-terminus Atc_2664 PF03799 Cell division protein FtsQ Atc_2664 PF08478 POTRA domain, FtsQ-type Atc_2665 PF02491 SHS2 domain inserted in FTSA Atc_2665 PF14450 Cell division protein FtsA Atc_2666 PF00091 Tubulin/FtsZ family, GTPase domain Atc_2666 PF12327 FtsZ family, C-terminal domain Atc_2667 PF00343 Carbohydrate phosphorylase Atc_2668 PF01676 Metalloenzyme superfamily Atc_2668 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Atc_2669 PF01551 Peptidase family M23 Atc_2670 PF03572 Peptidase family S41 Atc_2670 PF13180 PDZ domain Atc_2671 PF01965 DJ-1/PfpI family Atc_2672 PF13616 PPIC-type PPIASE domain Atc_2672 PF13624 SurA N-terminal domain Atc_2673 PF02617 ATP-dependent Clp protease adaptor protein ClpS Atc_2674 PF00004 ATPase family associated with various cellular activities (AAA) Atc_2674 PF02861 Clp amino terminal domain Atc_2674 PF07724 AAA domain (Cdc48 subfamily) Atc_2674 PF10431 C-terminal, D2-small domain, of ClpB protein Atc_2675 PF00561 alpha/beta hydrolase fold Atc_2676 PF07021 Methionine biosynthesis protein MetW Atc_2677 PF13410 Glutathione S-transferase, C-terminal domain Atc_2677 PF13417 Glutathione S-transferase, N-terminal domain Atc_2678 PF01209 ubiE/COQ5 methyltransferase family Atc_2679 PF01717 Cobalamin-independent synthase, Catalytic domain Atc_2679 PF08267 Cobalamin-independent synthase, N-terminal domain Atc_2681 PF00071 Ras family Atc_2683 PF13488 Atc_2683 Atc_2685 PF00905 Penicillin binding protein transpeptidase domain Atc_2685 PF03717 Penicillin-binding Protein dimerisation domain Atc_2686 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Atc_2687 PF14373 Atc_2687 Atc_2688 PF02254 TrkA-N domain Atc_2688 PF07885 Ion channel Atc_2689 PF00905 Penicillin binding protein transpeptidase domain Atc_2689 PF03717 Penicillin-binding Protein dimerisation domain Atc_2690 PF13525 Outer membrane lipoprotein Atc_2691 PF13180 PDZ domain Atc_2691 PF13365 Trypsin-like peptidase domain Atc_2692 PF00768 D-alanyl-D-alanine carboxypeptidase Atc_2692 PF07943 Penicillin-binding protein 5, C-terminal domain Atc_2693 PF04052 TolB amino-terminal domain Atc_2693 PF07676 WD40-like Beta Propeller Repeat Atc_2694 PF03595 Voltage-dependent anion channel Atc_2695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atc_2695 PF03466 LysR substrate binding domain Atc_2697 PF00829 Ribosomal prokaryotic L21 protein Atc_2698 PF01016 Ribosomal L27 protein Atc_2699 PF01018 GTP1/OBG Atc_2699 PF01926 50S ribosome-binding GTPase Atc_2700 PF00696 Amino acid kinase family Atc_2700 PF01472 PUA domain Atc_2701 PF00691 OmpA family Atc_2702 PF01564 Spermine/spermidine synthase Atc_2702 PF17284 Atc_2702 Atc_2703 PF02675 S-adenosylmethionine decarboxylase Atc_2704 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Atc_2704 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Atc_2705 PF13627 Atc_2705 Atc_2706 PF00206 Lyase Atc_2706 PF14698 Argininosuccinate lyase C-terminal Atc_2707 PF01292 Prokaryotic cytochrome b561 Atc_2709 PF01636 Phosphotransferase enzyme family Atc_2710 PF11191 Protein of unknown function (DUF2782) Atc_2711 PF03641 Possible lysine decarboxylase Atc_2712 PF00476 DNA polymerase family A Atc_2712 PF01367 5'-3' exonuclease, C-terminal SAM fold Atc_2712 PF01612 3'-5' exonuclease Atc_2712 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Atc_2713 PF02254 TrkA-N domain Atc_2713 PF07885 Ion channel Atc_2714 PF01926 50S ribosome-binding GTPase Atc_2715 PF05140 Atc_2715 Atc_2716 PF01578 Atc_2716 Atc_2717 PF07690 Major Facilitator Superfamily Atc_2718 PF02261 Aspartate decarboxylase Atc_2720 PF00122 E1-E2 ATPase Atc_2720 PF00690 Cation transporter/ATPase, N-terminus Atc_2720 PF00702 haloacid dehalogenase-like hydrolase Atc_2721 PF08450 SMP-30/Gluconolaconase/LRE-like region Atc_2722 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atc_2722 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Atc_2723 PF00083 Sugar (and other) transporter Atc_2724 PF00005 ABC transporter Atc_2724 PF12848 ABC transporter Atc_2727 PF07007 Protein of unknown function (DUF1311) Atc_2728 PF01610 Atc_2728 Atc_2728 PF13542 Atc_2728 Atc_2728 PF14690 Atc_2728 Atc_2734 PF16754 Atc_2734 Atc_2735 PF01609 Transposase DDE domain Atc_2735 PF05598 Atc_2735 Atc_2739 PF01551 Peptidase family M23 Atc_2742 PF01551 Peptidase family M23 Atc_2744 PF07811 Atc_2744 Atc_2745 PF02643 Uncharacterized ACR, COG1430 Atc_2746 PF00482 Type II secretion system (T2SS), protein F Atc_2747 PF00482 Type II secretion system (T2SS), protein F Atc_2748 PF00437 Type II/IV secretion system protein Atc_2748 PF00498 FHA domain Atc_2749 PF00263 Atc_2749 Atc_2749 PF13629 Atc_2749 Atc_2750 PF08666 SAF domain Atc_2750 PF16976 Atc_2750 Atc_2755 PF13400 Atc_2755 Atc_2760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atc_2761 PF04348 LppC putative lipoprotein Atc_2762 PF02021 Uncharacterised protein family UPF0102 Atc_2763 PF01467 Cytidylyltransferase Atc_2763 PF13580 SIS domain Atc_2764 PF01565 FAD binding domain Atc_2764 PF02913 FAD linked oxidases, C-terminal domain Atc_2765 PF02582 Atc_2765 Atc_2766 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Atc_2767 PF00691 OmpA family Atc_2768 PF03573 outer membrane porin, OprD family Atc_2769 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atc_2769 PF03466 LysR substrate binding domain Atc_2770 PF04055 Radical SAM superfamily Atc_2770 PF06969 HemN C-terminal domain Atc_2771 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase Atc_2772 PF13561 Enoyl-(Acyl carrier protein) reductase Atc_2773 PF01106 NifU-like domain Atc_2774 PF00919 Uncharacterized protein family UPF0004 Atc_2774 PF04055 Radical SAM superfamily Atc_2775 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Atc_2776 PF02152 Dihydroneopterin aldolase Atc_2777 PF02660 Atc_2777 Atc_2778 PF13432 Tetratricopeptide repeat Atc_2779 PF00814 Glycoprotease family Atc_2780 PF04305 Atc_2780 Atc_2782 PF00255 Glutathione peroxidase Atc_2783 PF00579 tRNA synthetases class I (W and Y) Atc_2785 PF02635 DsrE/DsrF-like family Atc_2786 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Atc_2787 PF02656 Atc_2787 Atc_2787 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Atc_2788 PF01914 Atc_2788 Atc_2789 PF09723 Atc_2789 Atc_2790 PF00152 tRNA synthetases class II (D, K and N) Atc_2790 PF01336 OB-fold nucleic acid binding domain Atc_2790 PF02938 GAD domain Atc_2791 PF00293 NUDIX domain Atc_2792 PF02445 Quinolinate synthetase A protein Atc_2793 PF01553 Acyltransferase Atc_2794 PF01709 Transcriptional regulator Atc_2795 PF02075 Crossover junction endodeoxyribonuclease RuvC Atc_2796 PF01330 RuvA N terminal domain Atc_2796 PF07499 RuvA, C-terminal domain Atc_2796 PF14520 Helix-hairpin-helix domain Atc_2797 PF05491 Holliday junction DNA helicase ruvB C-terminus Atc_2797 PF05496 Holliday junction DNA helicase ruvB N-terminus Atc_2798 PF03061 Thioesterase superfamily Atc_2799 PF01618 Atc_2799 Atc_2800 PF02472 Biopolymer transport protein ExbD/TolR Atc_2801 PF13103 TonB C terminal Atc_2802 PF04052 TolB amino-terminal domain Atc_2802 PF07676 WD40-like Beta Propeller Repeat Atc_2803 PF06508 Queuosine biosynthesis protein QueC Atc_2804 PF04055 Radical SAM superfamily Atc_2804 PF13394 4Fe-4S single cluster domain Atc_2805 PF13432 Tetratricopeptide repeat Atc_2805 PF14559 Tetratricopeptide repeat Atc_2806 PF00691 OmpA family Atc_2807 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Atc_2807 PF03900 Porphobilinogen deaminase, C-terminal domain Atc_2808 PF02602 Uroporphyrinogen-III synthase HemD Atc_2809 PF00490 Delta-aminolevulinic acid dehydratase Atc_2810 PF03544 Gram-negative bacterial TonB protein C-terminal Atc_2811 PF00563 EAL domain Atc_2811 PF08668 HDOD domain Atc_2812 PF00083 Sugar (and other) transporter Atc_2813 PF03006 Atc_2813 Atc_2814 PF00122 E1-E2 ATPase Atc_2814 PF00403 Heavy-metal-associated domain Atc_2814 PF00702 haloacid dehalogenase-like hydrolase Atc_2815 PF00403 Heavy-metal-associated domain Atc_2818 PF00575 S1 RNA binding domain Atc_2818 PF10150 Ribonuclease E/G family Atc_2819 PF02545 Maf-like protein Atc_2821 PF14346 Domain of unknown function (DUF4398) Atc_2822 PF02590 Predicted SPOUT methyltransferase Atc_2823 PF02410 Oligomerisation domain Atc_2824 PF01467 Cytidylyltransferase Atc_2825 PF04966 Carbohydrate-selective porin, OprB family Atc_2826 PF01297 Periplasmic solute binding protein family Atc_2827 PF03279 Atc_2827 Atc_2828 PF00011 Hsp20/alpha crystallin family Atc_2829 PF01926 50S ribosome-binding GTPase Atc_2829 PF10396 GTP-binding protein TrmE N-terminus Atc_2829 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE Atc_2830 PF02096 60Kd inner membrane protein Atc_2830 PF14849 YidC periplasmic domain Atc_2831 PF01809 Atc_2831 Atc_2832 PF00468 Ribosomal protein L34 Atc_2833 PF00825 Ribonuclease P Atc_2834 PF00005 ABC transporter Atc_2835 PF02405 Atc_2835 Atc_2836 PF02470 Atc_2836 Atc_2837 PF05494 Toluene tolerance, Ttg2 Atc_2838 PF13466 STAS domain Atc_2839 PF00005 ABC transporter Atc_2840 PF01479 S4 domain Atc_2841 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Atc_2842 PF14279 Atc_2842 Atc_2843 PF00398 Ribosomal RNA adenine dimethylase Atc_2845 PF05036 Sporulation related domain Atc_2846 PF00750 tRNA synthetases class I (R) Atc_2846 PF03485 Arginyl tRNA synthetase N terminal domain Atc_2846 PF05746 DALR anticodon binding domain Atc_2847 PF07690 Major Facilitator Superfamily Atc_2848 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atc_2848 PF03466 LysR substrate binding domain Atc_2849 PF05175 Methyltransferase small domain Atc_2850 PF03372 Endonuclease/Exonuclease/phosphatase family Atc_2851 PF10084 Atc_2851 Atc_2852 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ Atc_2853 PF13417 Glutathione S-transferase, N-terminal domain Atc_2854 PF03372 Endonuclease/Exonuclease/phosphatase family Atc_2855 PF00762 Ferrochelatase Atc_2856 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Atc_2857 PF03702 Uncharacterised protein family (UPF0075) Atc_2858 PF01488 Shikimate / quinate 5-dehydrogenase Atc_2858 PF08501 Shikimate dehydrogenase substrate binding domain Atc_2859 PF00437 Type II/IV secretion system protein Atc_2859 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Atc_2860 PF00512 His Kinase A (phospho-acceptor) domain Atc_2860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_2861 PF00072 Response regulator receiver domain Atc_2861 PF00158 Sigma-54 interaction domain Atc_2862 PF01478 Type IV leader peptidase family Atc_2862 PF06750 Atc_2862 Atc_2863 PF01121 Dephospho-CoA kinase Atc_2864 PF07072 Protein of unknown function (DUF1342) Atc_2865 PF00316 Fructose-1-6-bisphosphatase Atc_2866 PF05818 Atc_2866 Atc_2867 PF04386 Stringent starvation protein B Atc_2868 PF01464 Transglycosylase SLT domain Atc_2868 PF13511 Atc_2868 Atc_2869 PF02954 Bacterial regulatory protein, Fis family Atc_2870 PF11906 Atc_2870 Atc_2870 PF13717 Atc_2870 Atc_2871 PF06325 Ribosomal protein L11 methyltransferase (PrmA) Atc_2872 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Atc_2872 PF02785 Biotin carboxylase C-terminal domain Atc_2872 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atc_2873 PF00364 Biotin-requiring enzyme Atc_2874 PF01220 Dehydroquinase class II Atc_2875 PF00881 Nitroreductase family Atc_2877 PF12836 Helix-hairpin-helix motif Atc_2878 PF01230 HIT domain Atc_2879 PF00202 Aminotransferase class-III Atc_2880 PF02581 Thiamine monophosphate synthase/TENI Atc_2881 PF08543 Phosphomethylpyrimidine kinase Atc_2883 PF00106 short chain dehydrogenase Atc_2p PF14373 Atc_2p Atc_2p03 PF00216 Bacterial DNA-binding protein Atc_2p04 PF06412 Atc_2p04 Atc_2p05 PF03389 MobA/MobL family Atc_2p06 PF02635 DsrE/DsrF-like family Atc_2p07 PF10049 Atc_2p07 Atc_2p08 PF07396 Phosphate-selective porin O and P Atc_2p09 PF00239 Resolvase, N terminal domain Atc_2p09 PF02796 Helix-turn-helix domain of resolvase Atc_2p10 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_2p11 PF09274 ParG Atc_2p12 PF04796 Atc_2p12 Atc_2p13 PF11740 Atc_2p13 Atc_3p PF02384 N-6 DNA Methylase Atc_3p PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) Atc_3p02 PF04610 Atc_3p02 Atc_3p04 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atc_3p04 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atc_3p05 PF02374 Anion-transporting ATPase Atc_3p06 PF06953 Arsenical resistance operon trans-acting repressor ArsD Atc_3p07 PF01451 Low molecular weight phosphotyrosine protein phosphatase Atc_3p08 PF12840 Helix-turn-helix domain Atc_3p09 PF00239 Resolvase, N terminal domain Atc_3p09 PF02796 Helix-turn-helix domain of resolvase Atc_3p10 PF14373 Atc_3p10 Atc_3p12 PF00216 Bacterial DNA-binding protein Atc_3p13 PF06412 Atc_3p13 Atc_3p14 PF03389 MobA/MobL family Atc_3p16 PF01850 PIN domain Atc_3p17 PF09084 NMT1/THI5 like Atc_3p18 PF01610 Atc_3p18 Atc_3p18 PF13542 Atc_3p18 Atc_3p18 PF14690 Atc_3p18 Atc_3p19 PF00890 FAD binding domain Atc_3p20 PF00392 Bacterial regulatory proteins, gntR family Atc_3p20 PF07702 UTRA domain Atc_3p21 PF00239 Resolvase, N terminal domain Atc_3p22 PF05406 WGR domain Atc_3p23 PF01850 PIN domain Atc_3p24 PF02381 MraZ protein Atc_3p26 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_3p27 PF16793 Atc_3p27 Atc_m001 PF01618 Atc_m001 Atc_m002 PF02472 Biopolymer transport protein ExbD/TolR Atc_m003 PF03544 Gram-negative bacterial TonB protein C-terminal Atc_m004 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Atc_m005 PF01979 Amidohydrolase family Atc_m006 PF00962 Adenosine/AMP deaminase Atc_m007 PF06516 Atc_m007 Atc_m008 PF05598 Atc_m008 Atc_m009 PF00665 Integrase core domain Atc_m011 PF13358 DDE superfamily endonuclease Atc_m012 PF05598 Atc_m012 Atc_m013 PF01695 IstB-like ATP binding protein Atc_m013 PF08483 Atc_m013 Atc_m014 PF00665 Integrase core domain Atc_m015 PF01609 Transposase DDE domain Atc_m016 PF13518 Helix-turn-helix domain Atc_m016 PF13592 Atc_m016 Atc_m017 PF03050 Atc_m017 Atc_m017 PF13817 Atc_m017 Atc_m018 PF00593 TonB dependent receptor Atc_m018 PF07715 TonB-dependent Receptor Plug Domain Atc_m019 PF01609 Transposase DDE domain Atc_m019 PF05598 Atc_m019 Atc_m020 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Atc_m020 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Atc_m021 PF01799 [2Fe-2S] binding domain Atc_m022 PF00941 FAD binding domain in molybdopterin dehydrogenase Atc_m022 PF03450 CO dehydrogenase flavoprotein C-terminal domain Atc_m023 PF04115 Ureidoglycolate hydrolase Atc_m024 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) Atc_m025 PF02625 XdhC and CoxI family Atc_m025 PF13478 XdhC Rossmann domain Atc_m026 PF13318 Atc_m026 Atc_m027 PF01425 Amidase Atc_m028 PF11533 Protein of unknown function (DUF3225) Atc_m029 PF01019 Gamma-glutamyltranspeptidase Atc_m030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atc_m030 PF03466 LysR substrate binding domain Atc_m031 PF01609 Transposase DDE domain Atc_m031 PF05598 Atc_m031 Atc_m032 PF00717 Peptidase S24-like Atc_m034 PF00589 Phage integrase family Atc_m034 PF02899 Phage integrase, N-terminal SAM-like domain Atc_m035 PF00216 Bacterial DNA-binding protein Atc_m037 PF00216 Bacterial DNA-binding protein Atc_m039 PF05016 Plasmid stabilisation system protein Atc_m040 PF03167 Uracil DNA glycosylase superfamily Atc_m042 PF06750 Atc_m042 Atc_m043 PF01478 Type IV leader peptidase family Atc_m044 PF13091 PLD-like domain Atc_m045 PF13358 DDE superfamily endonuclease Atc_m045 PF13518 Helix-turn-helix domain Atc_m045 PF13592 Atc_m045 Atc_m046 PF07804 HipA-like C-terminal domain Atc_m046 PF13657 HipA N-terminal domain Atc_m048 PF13245 Part of AAA domain Atc_m048 PF13361 UvrD-like helicase C-terminal domain Atc_m051 PF00270 DEAD/DEAH box helicase Atc_m051 PF00271 Helicase conserved C-terminal domain Atc_m052 PF08681 Protein of unknown function (DUF1778) Atc_m053 PF13673 Acetyltransferase (GNAT) domain Atc_m055 PF04014 Antidote-toxin recognition MazE Atc_m059 PF00563 EAL domain Atc_m059 PF00990 GGDEF domain Atc_m060 PF04986 Atc_m060 Atc_m061 PF13358 DDE superfamily endonuclease Atc_m062 PF13384 Homeodomain-like domain Atc_m062 PF13592 Atc_m062 Atc_m063 PF00873 AcrB/AcrD/AcrF family Atc_m065 PF02321 Outer membrane efflux protein Atc_m067 PF01053 Cys/Met metabolism PLP-dependent enzyme Atc_m068 PF00326 Prolyl oligopeptidase family Atc_m071 PF01610 Atc_m071 Atc_m071 PF13542 Atc_m071 Atc_m071 PF14690 Atc_m071 Atc_m073 PF01566 Atc_m073 Atc_m074 PF01545 Cation efflux family Atc_m075 PF01545 Cation efflux family Atc_m076 PF13411 MerR HTH family regulatory protein Atc_m079 PF11604 Copper binding periplasmic protein CusF Atc_m080 PF01292 Prokaryotic cytochrome b561 Atc_m081 PF01987 Mitochondrial biogenesis AIM24 Atc_m082 PF00873 AcrB/AcrD/AcrF family Atc_m083 PF16576 Atc_m083 Atc_m084 PF02321 Outer membrane efflux protein Atc_m085 PF01610 Atc_m085 Atc_m085 PF13542 Atc_m085 Atc_m085 PF14690 Atc_m085 Atc_m086 PF00122 E1-E2 ATPase Atc_m086 PF00403 Heavy-metal-associated domain Atc_m086 PF00702 haloacid dehalogenase-like hydrolase Atc_m087 PF03625 Domain of unknown function DUF302 Atc_m088 PF00403 Heavy-metal-associated domain Atc_m089 PF00462 Glutaredoxin Atc_m090 PF14342 Atc_m090 Atc_m091 PF07690 Major Facilitator Superfamily Atc_m092 PF03886 Protein of unknown function (DUF330) Atc_m093 PF02470 Atc_m093 Atc_m094 PF04403 Atc_m094 Atc_m096 PF08238 Sel1 repeat Atc_m098 PF06527 Atc_m098 Atc_m098 PF15978 Atc_m098 Atc_m099 PF11426 Tn7 transposition regulator TnsC Atc_m099 PF13401 AAA domain Atc_m100 PF00665 Integrase core domain Atc_m101 PF08721 TnsA endonuclease C terminal Atc_m101 PF08722 TnsA endonuclease N terminal Atc_m102 PF01610 Atc_m102 Atc_m102 PF13542 Atc_m102 Atc_m102 PF14690 Atc_m102 Atc_m104 PF01695 IstB-like ATP binding protein Atc_m104 PF08483 Atc_m104 Atc_m105 PF00665 Integrase core domain Atc_m107 PF00583 Acetyltransferase (GNAT) family Atc_m108 PF02627 Carboxymuconolactone decarboxylase family Atc_m109 PF12802 MarR family Atc_m110 PF12840 Helix-turn-helix domain Atc_m112 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) Atc_m115 PF01402 Ribbon-helix-helix protein, copG family Atc_m116 PF01464 Transglycosylase SLT domain Atc_m117 PF01476 LysM domain Atc_m126 PF01368 DHH family Atc_m126 PF02272 DHHA1 domain Atc_m129 PF00533 BRCA1 C Terminus (BRCT) domain Atc_m129 PF01653 NAD-dependent DNA ligase adenylation domain Atc_m129 PF03120 NAD-dependent DNA ligase OB-fold domain Atc_m129 PF12826 Helix-hairpin-helix motif Atc_m130 PF05175 Methyltransferase small domain Atc_m132 PF01844 HNH endonuclease Atc_m132 PF14239 Atc_m132 Atc_m137 PF00204 DNA gyrase B Atc_m137 PF00986 DNA gyrase B subunit, carboxyl terminus Atc_m137 PF01751 Toprim domain Atc_m137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atc_m139 PF00521 DNA gyrase/topoisomerase IV, subunit A Atc_m139 PF03989 DNA gyrase C-terminal domain, beta-propeller Atc_m140 PF01258 Prokaryotic dksA/traR C4-type zinc finger Atc_m141 PF00436 Single-strand binding protein family Atc_m154 PF10263 Atc_m154 Atc_m155 PF13240 Atc_m155 Atc_m156 PF04352 ProQ/FINO family Atc_m158 PF00589 Phage integrase family Atc_m158 PF13495 Phage integrase, N-terminal SAM-like domain Atc_m159 PF13488 Atc_m159 Atc_m160 PF07282 Atc_m160 Atc_m162 PF00270 DEAD/DEAH box helicase Atc_m162 PF00271 Helicase conserved C-terminal domain Atc_m162 PF09369 Atc_m162 Atc_m163 PF01695 IstB-like ATP binding protein Atc_m164 PF00665 Integrase core domain Atc_m165 PF00176 SNF2 family N-terminal domain Atc_m165 PF00271 Helicase conserved C-terminal domain Atc_m166 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Atc_m167 PF01850 PIN domain Atc_m168 PF02384 N-6 DNA Methylase Atc_m170 PF13391 Atc_m170 Atc_m172 PF13708 Atc_m172 Atc_m176 PF05717 Atc_m176 Atc_m177 PF13007 Atc_m177 Atc_m178 PF01548 Atc_m178 Atc_m178 PF02371 Atc_m178 Atc_m179 PF03050 Atc_m179 Atc_m180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Atc_m181 PF01695 IstB-like ATP binding protein Atc_m182 PF00665 Integrase core domain Atc_m183 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Atc_m184 PF03050 Atc_m184 Atc_m184 PF13817 Atc_m184 Atc_m186 PF03843 Atc_m186 Atc_m187 PF01618 Atc_m187 Atc_m188 PF02472 Biopolymer transport protein ExbD/TolR Atc_m189 PF07715 TonB-dependent Receptor Plug Domain Atc_m190 PF01610 Atc_m190 Atc_m190 PF13542 Atc_m190 Atc_m190 PF14690 Atc_m190 Atc_m191 PF00593 TonB dependent receptor Atc_m192 PF13701 Atc_m192 Atc_m196 PF01048 Phosphorylase superfamily Atc_m197 PF01610 Atc_m197 Atc_m197 PF14690 Atc_m197 Atc_m198 PF01048 Phosphorylase superfamily Atc_m199 PF01609 Transposase DDE domain Atc_m199 PF05598 Atc_m199 Atc_m200 PF01695 IstB-like ATP binding protein Atc_m200 PF08483 Atc_m200 Atc_m201 PF00665 Integrase core domain Atc_m202 PF01609 Transposase DDE domain Atc_m202 PF05598 Atc_m202 Atc_m205 PF03050 Atc_m205 Atc_m205 PF13007 Atc_m205 Atc_m205 PF13817 Atc_m205 Atc_m206 PF05717 Atc_m206 Atc_m208 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Atc_m208 PF08388 Atc_m208 Atc_m209 PF01610 Atc_m209 Atc_m209 PF13542 Atc_m209 Atc_m209 PF14690 Atc_m209 Atc_m210 PF00202 Aminotransferase class-III Atc_m211 PF00872 Atc_m211 Atc_m212 PF01610 Atc_m212 Atc_m212 PF13542 Atc_m212 Atc_m212 PF14690 Atc_m212 Atc_m213 PF00593 TonB dependent receptor Atc_m213 PF07715 TonB-dependent Receptor Plug Domain Atc_m214 PF01618 Atc_m214 Atc_m216 PF05598 Atc_m216 Atc_m217 PF01695 IstB-like ATP binding protein Atc_m217 PF08483 Atc_m217 Atc_m218 PF00665 Integrase core domain Atc_m219 PF01609 Transposase DDE domain Atc_m220 PF00872 Atc_m220 Atc_m222 PF13518 Helix-turn-helix domain Atc_m223 PF00665 Integrase core domain Atc_m226 PF01609 Transposase DDE domain Atc_m226 PF05598 Atc_m226 Atc_m229 PF07724 AAA domain (Cdc48 subfamily) Atc_m234 PF01609 Transposase DDE domain Atc_m234 PF05598 Atc_m234 Atc_m235 PF09722 Atc_m235 Atc_m236 PF13173 AAA domain Atc_m236 PF13635 Atc_m236 Atc_m239 PF13614 AAA domain Atc_m240 PF02195 ParB-like nuclease domain Atc_m242 PF00268 Ribonucleotide reductase, small chain Atc_m245 PF13560 Helix-turn-helix domain Atc_m246 PF07804 HipA-like C-terminal domain Atc_m246 PF13657 HipA N-terminal domain Atc_m248 PF05717 Atc_m248 Atc_m249 PF13007 Atc_m249 Atc_m250 PF01548 Atc_m250 Atc_m250 PF02371 Atc_m250 Atc_m251 PF03050 Atc_m251 Atc_m252 PF03050 Atc_m252 Atc_m252 PF13817 Atc_m252 Atc_m253 PF00872 Atc_m253 Atc_m254 PF06912 Atc_m254 Atc_m255 PF13701 Atc_m255