Atc_0001 SM00382 ATPases associated with a variety of cellular activities Atc_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Atc_0002 SM00480 DNA polymerase III beta subunit Atc_0004 SM00387 Histidine kinase-like ATPases Atc_0004 SM00433 TopoisomeraseII Atc_0010 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Atc_0010 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Atc_0010 SM00493 Atc_0010 Atc_0014 SM00257 Lysin motif Atc_0017 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Atc_0017 SM00387 Histidine kinase-like ATPases Atc_0017 SM00388 His Kinase A (phosphoacceptor) domain Atc_0018 SM00382 ATPases associated with a variety of cellular activities Atc_0018 SM00448 cheY-homologous receiver domain Atc_0019 SM00852 Probable molybdopterin binding domain Atc_0022 SM01228 Atc_0022 Atc_0025 SM00470 ParB-like nuclease domain Atc_0033 SM00382 ATPases associated with a variety of cellular activities Atc_0038 SM00382 ATPases associated with a variety of cellular activities Atc_0053 SM00267 diguanylate cyclase Atc_0055 SM00271 DnaJ molecular chaperone homology domain Atc_0058 SM00387 Histidine kinase-like ATPases Atc_0058 SM00388 His Kinase A (phosphoacceptor) domain Atc_0059 SM00448 cheY-homologous receiver domain Atc_0059 SM00862 Transcriptional regulatory protein, C terminal Atc_0071 SM00861 Transketolase, pyrimidine binding domain Atc_0072 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Atc_0088 SM00382 ATPases associated with a variety of cellular activities Atc_0099 SM00470 ParB-like nuclease domain Atc_0148 SM00448 cheY-homologous receiver domain Atc_0148 SM00862 Transcriptional regulatory protein, C terminal Atc_0168 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Atc_0168 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Atc_0168 SM00493 Atc_0168 Atc_0176 SM01126 Atc_0176 Atc_0192 SM00052 Putative diguanylate phosphodiesterase Atc_0192 SM00267 diguanylate cyclase Atc_0193 SM00448 cheY-homologous receiver domain Atc_0195 SM00073 Histidine Phosphotransfer domain Atc_0195 SM00260 Two component signalling adaptor domain Atc_0195 SM00387 Histidine kinase-like ATPases Atc_0195 SM01231 Atc_0195 Atc_0197 SM00849 Metallo-beta-lactamase superfamily Atc_0198 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Atc_0199 SM00260 Two component signalling adaptor domain Atc_0199 SM00448 cheY-homologous receiver domain Atc_0200 SM00091 PAS domain Atc_0200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Atc_0201 SM00052 Putative diguanylate phosphodiesterase Atc_0219 SM00382 ATPases associated with a variety of cellular activities Atc_0227 SM01120 Atc_0227 Atc_0232 SM00052 Putative diguanylate phosphodiesterase Atc_0232 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Atc_0232 SM00091 PAS domain Atc_0232 SM00267 diguanylate cyclase Atc_0234 SM00382 ATPases associated with a variety of cellular activities Atc_0235 SM01005 Alanine racemase, C-terminal domain Atc_0237 SM00382 ATPases associated with a variety of cellular activities Atc_0254 SM00052 Putative diguanylate phosphodiesterase Atc_0254 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Atc_0254 SM00267 diguanylate cyclase Atc_0255 SM00382 ATPases associated with a variety of cellular activities Atc_0262 SM00382 ATPases associated with a variety of cellular activities Atc_0262 SM00448 cheY-homologous receiver domain Atc_0264 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Atc_0264 SM00387 Histidine kinase-like ATPases Atc_0264 SM00388 His Kinase A (phosphoacceptor) domain Atc_0268 SM00732 Likely ribonuclease with RNase H fold. Atc_0276 SM00899 Atc_0276 Atc_0279 SM00861 Transketolase, pyrimidine binding domain Atc_0283 SM00448 cheY-homologous receiver domain Atc_0283 SM00862 Transcriptional regulatory protein, C terminal Atc_0284 SM00387 Histidine kinase-like ATPases Atc_0284 SM00388 His Kinase A (phosphoacceptor) domain Atc_0297 SM00838 Elongation factor G C-terminus Atc_0300 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Atc_0300 SM01232 Atc_0300 Atc_0301 SM00450 Rhodanese Homology Domain Atc_0302 SM01230 Atc_0302 Atc_0314 SM00937 Atc_0314 Atc_0317 SM00382 ATPases associated with a variety of cellular activities Atc_0329 SM00450 Rhodanese Homology Domain Atc_0334 SM00996 S-adenosyl-L-homocysteine hydrolase Atc_0334 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Atc_0337 SM00244 prohibitin homologues Atc_0339 SM00642 Alpha-amylase domain Atc_0367 SM00116 Domain in cystathionine beta-synthase and other proteins. Atc_0371 SM00382 ATPases associated with a variety of cellular activities Atc_0380 SM01204 Atc_0380 Atc_0381 SM00478 endonuclease III Atc_0394 SM00382 ATPases associated with a variety of cellular activities Atc_0394 SM00448 cheY-homologous receiver domain Atc_0396 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Atc_0396 SM00387 Histidine kinase-like ATPases Atc_0396 SM00388 His Kinase A (phosphoacceptor) domain Atc_0398 SM00382 ATPases associated with a variety of cellular activities Atc_0403 SM00478 endonuclease III Atc_0413 SM01011 Aminopeptidase P, N-terminal domain Atc_0422 SM01103 Atc_0422 Atc_0429 SM00974 Atc_0429 Atc_0433 SM00966 SpoVT / AbrB like domain Atc_0442 SM00859 Semialdehyde dehydrogenase, NAD binding domain Atc_0450 SM00936 Penicillin-binding protein 5, C-terminal domain Atc_0456 SM00387 Histidine kinase-like ATPases Atc_0456 SM00388 His Kinase A (phosphoacceptor) domain Atc_0457 SM00448 cheY-homologous receiver domain Atc_0457 SM00862 Transcriptional regulatory protein, C terminal Atc_0459 SM01400 Atc_0459 Atc_0463 SM00028 Tetratricopeptide repeats Atc_0466 SM00937 Atc_0466 Atc_0468 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Atc_0468 SM01232 Atc_0468 Atc_0473 SM00382 ATPases associated with a variety of cellular activities Atc_0473 SM00962 SRP54-type protein, GTPase domain Atc_0473 SM00963 SRP54-type protein, helical bundle domain Atc_0474 SM00382 ATPases associated with a variety of cellular activities Atc_0479 SM00382 ATPases associated with a variety of cellular activities Atc_0479 SM01086 C-terminal, D2-small domain, of ClpB protein Atc_0485 SM00822 Atc_0485 Atc_0488 SM00028 Tetratricopeptide repeats Atc_0493 SM01126 Atc_0493 Atc_0498 SM00487 DEAD-like helicases superfamily Atc_0498 SM00490 helicase superfamily c-terminal domain Atc_0499 SM00357 Cold shock protein domain Atc_0517 SM00382 ATPases associated with a variety of cellular activities Atc_0519 SM00487 DEAD-like helicases superfamily Atc_0519 SM00490 helicase superfamily c-terminal domain Atc_0532 SM00729 Elongator protein 3, MiaB family, Radical SAM Atc_0535 SM00116 Domain in cystathionine beta-synthase and other proteins. Atc_0535 SM01091 Transporter associated domain Atc_0550 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Atc_0551 SM00849 Metallo-beta-lactamase superfamily Atc_0558 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Atc_0567 SM00382 ATPases associated with a variety of cellular activities Atc_0567 SM00962 SRP54-type protein, GTPase domain Atc_0567 SM00963 SRP54-type protein, helical bundle domain Atc_0575 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Atc_0586 SM00671 Sel1-like repeats. Atc_0593 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Atc_0593 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Atc_0594 SM00649 Ribosomal protein L11/L12 Atc_0599 SM00663 RNA polymerase I subunit A N-terminus Atc_0602 SM00838 Elongation factor G C-terminus Atc_0602 SM00889 Elongation factor G, domain IV Atc_0604 SM01403 Atc_0604 Atc_0608 SM01382 Atc_0608 Atc_0608 SM01383 Atc_0608 Atc_0611 SM00322 K homology RNA-binding domain Atc_0615 SM01374 Atc_0615 Atc_0616 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Atc_0626 SM00316 Ribosomal protein S1-like RNA-binding domain Atc_0630 SM00363 S4 RNA-binding domain Atc_0630 SM01390 Atc_0630 Atc_0632 SM00662 RNA polymerases D Atc_0656 SM00851 MGS-like domain Atc_0656 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Atc_0658 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Atc_0667 SM00382 ATPases associated with a variety of cellular activities Atc_0669 SM00986 Uracil DNA glycosylase superfamily Atc_0669 SM00987 UreE urease accessory protein, C-terminal domain Atc_0673 SM00479 Atc_0673 Atc_0674 SM00448 cheY-homologous receiver domain Atc_0674 SM00862 Transcriptional regulatory protein, C terminal Atc_0685 SM00257 Lysin motif Atc_0691 SM01209 Atc_0691 Atc_0691 SM01210 Atc_0691 Atc_0692 SM00798 AICARFT/IMPCHase bienzyme Atc_0692 SM00851 MGS-like domain Atc_0702 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Atc_0732 SM01219 Atc_0732 Atc_0733 SM00341 Helicase and RNase D C-terminal Atc_0733 SM00487 DEAD-like helicases superfamily Atc_0733 SM00490 helicase superfamily c-terminal domain Atc_0733 SM00956 Atc_0733 Atc_0739 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Atc_0739 SM00387 Histidine kinase-like ATPases Atc_0739 SM00388 His Kinase A (phosphoacceptor) domain Atc_0740 SM00382 ATPases associated with a variety of cellular activities Atc_0740 SM00448 cheY-homologous receiver domain Atc_0758 SM00382 ATPases associated with a variety of cellular activities Atc_0767 SM00347 helix_turn_helix multiple antibiotic resistance protein Atc_0778 SM00984 UDP binding domain Atc_0787 SM00382 ATPases associated with a variety of cellular activities Atc_0801 SM00849 Metallo-beta-lactamase superfamily Atc_0801 SM01027 Beta-Casp domain Atc_0812 SM00357 Cold shock protein domain Atc_0812 SM00382 ATPases associated with a variety of cellular activities Atc_0812 SM00959 Rho termination factor, N-terminal domain Atc_0814 SM00919 Malic enzyme, NAD binding domain Atc_0814 SM01274 Atc_0814 Atc_0822 SM00382 ATPases associated with a variety of cellular activities Atc_0835 SM00448 cheY-homologous receiver domain Atc_0835 SM00862 Transcriptional regulatory protein, C terminal Atc_0836 SM00091 PAS domain Atc_0836 SM00387 Histidine kinase-like ATPases Atc_0836 SM00388 His Kinase A (phosphoacceptor) domain Atc_0837 SM00382 ATPases associated with a variety of cellular activities Atc_0848 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Atc_0850 SM00935 Outer membrane protein (OmpH-like) Atc_0858 SM00481 DNA polymerase alpha chain like domain Atc_0860 SM00977 TilS substrate C-terminal domain Atc_0866 SM00671 Sel1-like repeats. Atc_0869 SM00382 ATPases associated with a variety of cellular activities Atc_0887 SM00382 ATPases associated with a variety of cellular activities Atc_0905 SM00564 beta-propeller repeat Atc_0915 SM00382 ATPases associated with a variety of cellular activities Atc_0917 SM00460 Transglutaminase/protease-like homologues Atc_0918 SM00382 ATPases associated with a variety of cellular activities Atc_0927 SM00961 Ribulose bisphosphate carboxylase, small chain Atc_0932 SM00877 Atc_0932 Atc_0933 SM00877 Atc_0933 Atc_0938 SM00327 von Willebrand factor (vWF) type A domain Atc_0942 SM00938 Nitrogen regulatory protein P-II Atc_0944 SM00877 Atc_0944 Atc_0950 SM00387 Histidine kinase-like ATPases Atc_0950 SM00388 His Kinase A (phosphoacceptor) domain Atc_0951 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Atc_0953 SM01350 Atc_0953 Atc_0961 SM00100 Cyclic nucleotide-monophosphate binding domain Atc_0962 SM00464 Found in ATP-dependent protease La (LON) Atc_0963 SM00729 Elongator protein 3, MiaB family, Radical SAM Atc_0975 SM00226 Low molecular weight phosphatase family Atc_0976 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Atc_0989 SM00465 GIY-YIG type nucleases (URI domain) Atc_0989 SM00479 Atc_0989 Atc_1000 SM00316 Ribosomal protein S1-like RNA-binding domain Atc_1000 SM00357 Cold shock protein domain Atc_1000 SM00955 Atc_1000 Atc_1004 SM00852 Probable molybdopterin binding domain Atc_1015 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Atc_1016 SM00822 Atc_1016 Atc_1017 SM00823 Phosphopantetheine attachment site Atc_1018 SM00825 Beta-ketoacyl synthase Atc_1029 SM00382 ATPases associated with a variety of cellular activities Atc_1049 SM01126 Atc_1049 Atc_1079 SM00382 ATPases associated with a variety of cellular activities Atc_1092 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Atc_1092 SM00091 PAS domain Atc_1092 SM00267 diguanylate cyclase Atc_1093 SM00867 YceI-like domain Atc_1103 SM00382 ATPases associated with a variety of cellular activities Atc_1114 SM00487 DEAD-like helicases superfamily Atc_1121 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Atc_1121 SM00382 ATPases associated with a variety of cellular activities Atc_1122 SM00448 cheY-homologous receiver domain Atc_1122 SM01012 Atc_1122 Atc_1124 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Atc_1134 SM00974 Atc_1134 Atc_1146 SM00487 DEAD-like helicases superfamily Atc_1154 SM00986 Uracil DNA glycosylase superfamily Atc_1154 SM00987 UreE urease accessory protein, C-terminal domain Atc_1206 SM00470 ParB-like nuclease domain Atc_1214 SM00480 DNA polymerase III beta subunit Atc_1216 SM00490 helicase superfamily c-terminal domain Atc_1221 SM01101 Atc_1221 Atc_1224 SM00487 DEAD-like helicases superfamily Atc_1224 SM00491 Atc_1224 Atc_1253 SM00530 Helix-turn-helix XRE-family like proteins Atc_1256 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Atc_1256 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Atc_1256 SM00493 Atc_1256 Atc_1257 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Atc_1257 SM00475 5'-3' exonuclease Atc_1267 SM00411 bacterial (prokaryotic) histone like domain Atc_1285 SM00470 ParB-like nuclease domain Atc_1287 SM00530 Helix-turn-helix XRE-family like proteins Atc_1302 SM00382 ATPases associated with a variety of cellular activities Atc_1304 SM00493 Atc_1304 Atc_1308 SM00116 Domain in cystathionine beta-synthase and other proteins. Atc_1310 SM00853 MutL C terminal dimerisation domain Atc_1310 SM01340 Atc_1310 Atc_1322 SM01359 Atc_1322 Atc_1322 SM01360 Atc_1322 Atc_1326 SM00861 Transketolase, pyrimidine binding domain Atc_1350 SM00862 Transcriptional regulatory protein, C terminal Atc_1357 SM00382 ATPases associated with a variety of cellular activities Atc_1365 SM00562 Atc_1365 Atc_1367 SM00028 Tetratricopeptide repeats Atc_1368 SM00530 Helix-turn-helix XRE-family like proteins Atc_1372 SM00564 beta-propeller repeat Atc_1375 SM00855 Phosphoglycerate mutase family Atc_1386 SM00434 DNA Topoisomerase IV Atc_1388 SM00830 Chorismate mutase type II Atc_1394 SM00316 Ribosomal protein S1-like RNA-binding domain Atc_1395 SM00411 bacterial (prokaryotic) histone like domain Atc_1398 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Atc_1402 SM00382 ATPases associated with a variety of cellular activities Atc_1402 SM00994 ClpX C4-type zinc finger Atc_1402 SM01086 C-terminal, D2-small domain, of ClpB protein Atc_1403 SM00382 ATPases associated with a variety of cellular activities Atc_1403 SM00464 Found in ATP-dependent protease La (LON) Atc_1404 SM00411 bacterial (prokaryotic) histone like domain Atc_1410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Atc_1410 SM00267 diguanylate cyclase Atc_1411 SM00671 Sel1-like repeats. Atc_1417 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Atc_1417 SM00267 diguanylate cyclase Atc_1429 SM00840 Atc_1429 Atc_1431 SM00316 Ribosomal protein S1-like RNA-binding domain Atc_1432 SM00363 S4 RNA-binding domain Atc_1435 SM00382 ATPases associated with a variety of cellular activities Atc_1445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Atc_1446 SM00260 Two component signalling adaptor domain Atc_1446 SM00448 cheY-homologous receiver domain Atc_1447 SM00849 Metallo-beta-lactamase superfamily Atc_1449 SM00073 Histidine Phosphotransfer domain Atc_1449 SM00260 Two component signalling adaptor domain Atc_1449 SM00387 Histidine kinase-like ATPases Atc_1449 SM01231 Atc_1449 Atc_1451 SM00448 cheY-homologous receiver domain Atc_1459 SM00858 Atc_1459 Atc_1468 SM00047 Lysozyme subfamily 2 Atc_1480 SM00382 ATPases associated with a variety of cellular activities Atc_1481 SM00387 Histidine kinase-like ATPases Atc_1481 SM00388 His Kinase A (phosphoacceptor) domain Atc_1482 SM00382 ATPases associated with a variety of cellular activities Atc_1482 SM00448 cheY-homologous receiver domain Atc_1487 SM00382 ATPases associated with a variety of cellular activities Atc_1498 SM00382 ATPases associated with a variety of cellular activities Atc_1498 SM00962 SRP54-type protein, GTPase domain Atc_1502 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Atc_1502 SM00534 ATPase domain of DNA mismatch repair MUTS family Atc_1504 SM00479 Atc_1504 Atc_1506 SM00463 Small MutS-related domain Atc_1514 SM00116 Domain in cystathionine beta-synthase and other proteins. Atc_1514 SM01240 Atc_1514 Atc_1516 SM00100 Cyclic nucleotide-monophosphate binding domain Atc_1516 SM00419 helix_turn_helix, cAMP Regulatory protein Atc_1519 SM00478 endonuclease III Atc_1531 SM01133 Atc_1531 Atc_1549 SM00530 Helix-turn-helix XRE-family like proteins Atc_1550 SM00155 Phospholipase D. Active site motifs. Atc_1551 SM00267 diguanylate cyclase Atc_1552 SM00267 diguanylate cyclase Atc_1558 SM00052 Putative diguanylate phosphodiesterase Atc_1558 SM00267 diguanylate cyclase Atc_1559 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Atc_1559 SM00091 PAS domain Atc_1559 SM00267 diguanylate cyclase Atc_1577 SM00382 ATPases associated with a variety of cellular activities Atc_1585 SM00100 Cyclic nucleotide-monophosphate binding domain Atc_1585 SM00419 helix_turn_helix, cAMP Regulatory protein Atc_1593A SM00448 cheY-homologous receiver domain Atc_1593A SM00862 Transcriptional regulatory protein, C terminal Atc_1594 SM00387 Histidine kinase-like ATPases Atc_1594 SM00388 His Kinase A (phosphoacceptor) domain Atc_1595 SM00564 beta-propeller repeat Atc_1598 SM00671 Sel1-like repeats. Atc_1601 SM00564 beta-propeller repeat Atc_1606 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Atc_1614 SM00729 Elongator protein 3, MiaB family, Radical SAM Atc_1628 SM01126 Atc_1628 Atc_1653 SM00670 Large family of predicted nucleotide-binding domains Atc_1662 SM00382 ATPases associated with a variety of cellular activities Atc_1663 SM00327 von Willebrand factor (vWF) type A domain Atc_1664 SM00530 Helix-turn-helix XRE-family like proteins Atc_1683 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Atc_1685 SM00382 ATPases associated with a variety of cellular activities Atc_1689 SM00849 Metallo-beta-lactamase superfamily Atc_1693 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Atc_1697 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Atc_1697 SM00292 breast cancer carboxy-terminal domain Atc_1697 SM00532 Ligase N family Atc_1703 SM00478 endonuclease III Atc_1704 SM00363 S4 RNA-binding domain Atc_1715 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Atc_1718 SM00052 Putative diguanylate phosphodiesterase Atc_1718 SM00267 diguanylate cyclase Atc_1718 SM00448 cheY-homologous receiver domain Atc_1719 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Atc_1719 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Atc_1719 SM00091 PAS domain Atc_1719 SM00387 Histidine kinase-like ATPases Atc_1719 SM00388 His Kinase A (phosphoacceptor) domain Atc_1719 SM00448 cheY-homologous receiver domain Atc_1734 SM00904 Riboflavin kinase Atc_1740 SM00382 ATPases associated with a variety of cellular activities Atc_1743 SM00646 Atc_1743 Atc_1746 SM00450 Rhodanese Homology Domain Atc_1751 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Atc_1760 SM00382 ATPases associated with a variety of cellular activities Atc_1767 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Atc_1767 SM00534 ATPase domain of DNA mismatch repair MUTS family Atc_1775 SM00965 Secretin and TonB N terminus short domain Atc_1779 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Atc_1783 SM00563 Phosphate acyltransferases Atc_1785 SM00788 Adenylosuccinate synthetase Atc_1787 SM00244 prohibitin homologues Atc_1788 SM00244 prohibitin homologues Atc_1808 SM00347 helix_turn_helix multiple antibiotic resistance protein Atc_1809 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Atc_1822 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Atc_1822 SM00465 GIY-YIG type nucleases (URI domain) Atc_1824 SM00841 Elongation factor P, C-terminal Atc_1824 SM01185 Atc_1824 Atc_1827 SM01192 Atc_1827 Atc_1827 SM01193 Atc_1827 Atc_1830 SM00487 DEAD-like helicases superfamily Atc_1830 SM00490 helicase superfamily c-terminal domain Atc_1839 SM00382 ATPases associated with a variety of cellular activities Atc_1854 SM00487 DEAD-like helicases superfamily Atc_1854 SM00490 helicase superfamily c-terminal domain Atc_1861 SM00938 Nitrogen regulatory protein P-II Atc_1864 SM01230 Atc_1864 Atc_1866 SM00382 ATPases associated with a variety of cellular activities Atc_1866 SM00448 cheY-homologous receiver domain Atc_1867 SM00091 PAS domain Atc_1867 SM00387 Histidine kinase-like ATPases Atc_1867 SM00388 His Kinase A (phosphoacceptor) domain Atc_1895 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Atc_1902 SM00849 Metallo-beta-lactamase superfamily Atc_1903 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Atc_1920 SM00100 Cyclic nucleotide-monophosphate binding domain Atc_1920 SM00419 helix_turn_helix, cAMP Regulatory protein Atc_1926 SM00478 endonuclease III Atc_1935 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Atc_1941 SM01353 Atc_1941 Atc_1954 SM00849 Metallo-beta-lactamase superfamily Atc_1956 SM00967 RNA 2'-O ribose methyltransferase substrate binding Atc_1959 SM00481 DNA polymerase alpha chain like domain Atc_1964 SM00487 DEAD-like helicases superfamily Atc_1964 SM00490 helicase superfamily c-terminal domain Atc_1967 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Atc_1967 SM00954 Region found in RelA / SpoT proteins Atc_1968 SM01409 Atc_1968 Atc_1969 SM00072 Guanylate kinase homologues. Atc_1975 SM00267 diguanylate cyclase Atc_1987 SM00885 D5 N terminal like Atc_1998 SM00507 HNH nucleases Atc_1p04 SM01321 Atc_1p04 Atc_2007 SM00487 DEAD-like helicases superfamily Atc_2007 SM00490 helicase superfamily c-terminal domain Atc_2009 SM00563 Phosphate acyltransferases Atc_2060 SM00052 Putative diguanylate phosphodiesterase Atc_2077 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Atc_2084 SM00530 Helix-turn-helix XRE-family like proteins Atc_2105 SM00382 ATPases associated with a variety of cellular activities Atc_2122 SM00470 ParB-like nuclease domain Atc_2130 SM00487 DEAD-like helicases superfamily Atc_2139 SM00778 Zinc-binding domain of primase-helicase Atc_2148 SM00880 Atc_2148 Atc_2148 SM01118 Atc_2148 Atc_2152 SM00382 ATPases associated with a variety of cellular activities Atc_2152 SM01086 C-terminal, D2-small domain, of ClpB protein Atc_2156 SM00861 Transketolase, pyrimidine binding domain Atc_2161 SM01323 Atc_2161 Atc_2164 SM01091 Transporter associated domain Atc_2176 SM00859 Semialdehyde dehydrogenase, NAD binding domain Atc_2177 SM01329 Atc_2177 Atc_2181 SM00852 Probable molybdopterin binding domain Atc_2182 SM00155 Phospholipase D. Active site motifs. Atc_2193 SM00382 ATPases associated with a variety of cellular activities Atc_2198 SM01211 Atc_2198 Atc_2200 SM00998 Adenylosuccinate lyase C-terminus Atc_2202 SM01130 Atc_2202 Atc_2204 SM00883 Chaperonin 10 Kd subunit Atc_2226 SM00845 GatB domain Atc_2236 SM00729 Elongator protein 3, MiaB family, Radical SAM Atc_2242 SM00382 ATPases associated with a variety of cellular activities Atc_2250 SM00382 ATPases associated with a variety of cellular activities Atc_2253 SM00642 Alpha-amylase domain Atc_2262 SM00400 zinc finger Atc_2262 SM00493 Atc_2262 Atc_2263 SM00463 Small MutS-related domain Atc_2263 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Atc_2263 SM00534 ATPase domain of DNA mismatch repair MUTS family Atc_2270 SM00387 Histidine kinase-like ATPases Atc_2273 SM00671 Sel1-like repeats. Atc_2279 SM00849 Metallo-beta-lactamase superfamily Atc_2280 SM00382 ATPases associated with a variety of cellular activities Atc_2294 SM00984 UDP binding domain Atc_2299 SM00358 Double-stranded RNA binding motif Atc_2299 SM00535 Ribonuclease III family Atc_2302 SM00838 Elongation factor G C-terminus Atc_2303 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Atc_2309 SM00382 ATPases associated with a variety of cellular activities Atc_2310 SM00382 ATPases associated with a variety of cellular activities Atc_2311 SM00897 FIST N domain Atc_2311 SM01204 Atc_2311 Atc_2317 SM00487 DEAD-like helicases superfamily Atc_2317 SM00491 Atc_2317 Atc_2332 SM00327 von Willebrand factor (vWF) type A domain Atc_2340 SM00729 Elongator protein 3, MiaB family, Radical SAM Atc_2343 SM00729 Elongator protein 3, MiaB family, Radical SAM Atc_2355 SM00450 Rhodanese Homology Domain Atc_2356 SM00729 Elongator protein 3, MiaB family, Radical SAM Atc_2359 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Atc_2363 SM00387 Histidine kinase-like ATPases Atc_2363 SM00388 His Kinase A (phosphoacceptor) domain Atc_2364 SM00382 ATPases associated with a variety of cellular activities Atc_2364 SM00448 cheY-homologous receiver domain Atc_2376 SM00936 Penicillin-binding protein 5, C-terminal domain Atc_2379 SM00729 Elongator protein 3, MiaB family, Radical SAM Atc_2387 SM00960 Roadblock/LC7 domain Atc_2400 SM00644 Atc_2400 Atc_2403 SM00917 LeuA allosteric (dimerisation) domain Atc_2416 SM00861 Transketolase, pyrimidine binding domain Atc_2417 SM00346 helix_turn_helix isocitrate lyase regulation Atc_2420 SM00091 PAS domain Atc_2420 SM00382 ATPases associated with a variety of cellular activities Atc_2428 SM01007 Class II Aldolase and Adducin N-terminal domain Atc_2435 SM00938 Nitrogen regulatory protein P-II Atc_2437 SM00881 CoA binding domain Atc_2440 SM01329 Atc_2440 Atc_2444 SM00257 Lysin motif Atc_2455 SM00479 Atc_2455 Atc_2460 SM00316 Ribosomal protein S1-like RNA-binding domain Atc_2460 SM00322 K homology RNA-binding domain Atc_2461 SM01387 Atc_2461 Atc_2465 SM00316 Ribosomal protein S1-like RNA-binding domain Atc_2465 SM00322 K homology RNA-binding domain Atc_2469 SM00382 ATPases associated with a variety of cellular activities Atc_2475 SM00382 ATPases associated with a variety of cellular activities Atc_2478 SM00843 Atc_2478 Atc_2481 SM00463 Small MutS-related domain Atc_2482 SM00422 helix_turn_helix, mercury resistance Atc_2486 SM00487 DEAD-like helicases superfamily Atc_2486 SM00490 helicase superfamily c-terminal domain Atc_2486 SM00982 Atc_2486 Atc_2486 SM01058 CarD-like/TRCF domain Atc_2504 SM00271 DnaJ molecular chaperone homology domain Atc_2521 SM00422 helix_turn_helix, mercury resistance Atc_2532 SM00382 ATPases associated with a variety of cellular activities Atc_2543 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Atc_2544 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Atc_2544 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Atc_2553 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Atc_2558 SM00873 B3/4 domain Atc_2558 SM00874 tRNA synthetase B5 domain Atc_2558 SM00896 Ferredoxin-fold anticodon binding domain Atc_2559 SM00411 bacterial (prokaryotic) histone like domain Atc_2560 SM00422 helix_turn_helix, mercury resistance Atc_2561 SM00382 ATPases associated with a variety of cellular activities Atc_2572 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Atc_2573 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Atc_2573 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Atc_2583 SM00855 Phosphoglycerate mutase family Atc_2590 SM00155 Phospholipase D. Active site motifs. Atc_2595 SM01001 AIR carboxylase Atc_2598 SM00100 Cyclic nucleotide-monophosphate binding domain Atc_2598 SM00419 helix_turn_helix, cAMP Regulatory protein Atc_2599 SM00849 Metallo-beta-lactamase superfamily Atc_2605 SM00382 ATPases associated with a variety of cellular activities Atc_2609 SM01152 Atc_2609 Atc_2610 SM00729 Elongator protein 3, MiaB family, Radical SAM Atc_2610 SM00876 Biotin and Thiamin Synthesis associated domain Atc_2620 SM00479 Atc_2620 Atc_2645 SM00957 SecA DEAD-like domain Atc_2645 SM00958 SecA preprotein cross-linking domain Atc_2665 SM00842 Cell division protein FtsA Atc_2666 SM00864 Tubulin/FtsZ family, GTPase domain Atc_2666 SM00865 Tubulin/FtsZ family, C-terminal domain Atc_2670 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Atc_2670 SM00245 tail specific protease Atc_2674 SM00382 ATPases associated with a variety of cellular activities Atc_2674 SM01086 C-terminal, D2-small domain, of ClpB protein Atc_2691 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Atc_2700 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Atc_2712 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Atc_2712 SM00474 3'-5' exonuclease Atc_2712 SM00475 5'-3' exonuclease Atc_2712 SM00482 DNA polymerase A domain Atc_2720 SM00831 Cation transporter/ATPase, N-terminus Atc_2724 SM00382 ATPases associated with a variety of cellular activities Atc_2748 SM00240 Forkhead associated domain Atc_2750 SM00858 Atc_2750 Atc_2770 SM00729 Elongator protein 3, MiaB family, Radical SAM Atc_2774 SM00729 Elongator protein 3, MiaB family, Radical SAM Atc_2776 SM00905 Dihydroneopterin aldolase Atc_2777 SM01207 Atc_2777 Atc_2778 SM00028 Tetratricopeptide repeats Atc_2789 SM00834 Putative regulatory protein Atc_2793 SM00563 Phosphate acyltransferases Atc_2796 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Atc_2797 SM00382 ATPases associated with a variety of cellular activities Atc_2809 SM01004 Delta-aminolevulinic acid dehydratase Atc_2811 SM00052 Putative diguanylate phosphodiesterase Atc_2818 SM00316 Ribosomal protein S1-like RNA-binding domain Atc_2831 SM01234 Atc_2831 Atc_2834 SM00382 ATPases associated with a variety of cellular activities Atc_2839 SM00382 ATPases associated with a variety of cellular activities Atc_2842 SM00507 HNH nucleases Atc_2843 SM00650 Ribosomal RNA adenine dimethylases Atc_2846 SM00836 DALR anticodon binding domain Atc_2846 SM01016 Arginyl tRNA synthetase N terminal dom Atc_2859 SM00382 ATPases associated with a variety of cellular activities Atc_2860 SM00387 Histidine kinase-like ATPases Atc_2860 SM00388 His Kinase A (phosphoacceptor) domain Atc_2861 SM00382 ATPases associated with a variety of cellular activities Atc_2861 SM00448 cheY-homologous receiver domain Atc_2872 SM00878 Biotin carboxylase C-terminal domain Atc_2883 SM00822 Atc_2883 Atc_2p03 SM00411 bacterial (prokaryotic) histone like domain Atc_2p09 SM00857 Resolvase, N terminal domain Atc_3p05 SM00382 ATPases associated with a variety of cellular activities Atc_3p07 SM00226 Low molecular weight phosphatase family Atc_3p08 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Atc_3p09 SM00857 Resolvase, N terminal domain Atc_3p12 SM00411 bacterial (prokaryotic) histone like domain Atc_3p15 SM00966 SpoVT / AbrB like domain Atc_3p20 SM00345 helix_turn_helix gluconate operon transcriptional repressor Atc_3p20 SM00866 Atc_3p20 Atc_3p21 SM00857 Resolvase, N terminal domain Atc_3p24 SM00966 SpoVT / AbrB like domain Atc_m013 SM00382 ATPases associated with a variety of cellular activities Atc_m020 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Atc_m022 SM01092 CO dehydrogenase flavoprotein C-terminal domain Atc_m035 SM00411 bacterial (prokaryotic) histone like domain Atc_m037 SM00411 bacterial (prokaryotic) histone like domain Atc_m040 SM00986 Uracil DNA glycosylase superfamily Atc_m040 SM00987 UreE urease accessory protein, C-terminal domain Atc_m051 SM00487 DEAD-like helicases superfamily Atc_m051 SM00490 helicase superfamily c-terminal domain Atc_m055 SM00966 SpoVT / AbrB like domain Atc_m059 SM00052 Putative diguanylate phosphodiesterase Atc_m059 SM00267 diguanylate cyclase Atc_m076 SM00422 helix_turn_helix, mercury resistance Atc_m099 SM00382 ATPases associated with a variety of cellular activities Atc_m104 SM00382 ATPases associated with a variety of cellular activities Atc_m109 SM00347 helix_turn_helix multiple antibiotic resistance protein Atc_m110 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Atc_m117 SM00257 Lysin motif Atc_m129 SM00532 Ligase N family Atc_m132 SM00507 HNH nucleases Atc_m137 SM00387 Histidine kinase-like ATPases Atc_m137 SM00433 TopoisomeraseII Atc_m139 SM00434 DNA Topoisomerase IV Atc_m156 SM00945 ProQ/FINO family Atc_m162 SM00487 DEAD-like helicases superfamily Atc_m162 SM00490 helicase superfamily c-terminal domain Atc_m165 SM00487 DEAD-like helicases superfamily Atc_m165 SM00490 helicase superfamily c-terminal domain Atc_m181 SM00382 ATPases associated with a variety of cellular activities Atc_m200 SM00382 ATPases associated with a variety of cellular activities Atc_m217 SM00382 ATPases associated with a variety of cellular activities Atc_m229 SM00382 ATPases associated with a variety of cellular activities Atc_m240 SM00470 ParB-like nuclease domain Atc_m245 SM00530 Helix-turn-helix XRE-family like proteins