Atc_1031 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF01610 Transposase 157 391 3.6E-72 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1031 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 93 142 4.4E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1031 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 46 87 4.4E-11 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1527 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF01610 Transposase 157 391 3.6E-72 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1527 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 93 142 4.4E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1527 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 46 87 4.4E-11 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0901 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF01610 Transposase 157 391 3.6E-72 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0901 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 93 142 4.4E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_0901 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 46 87 4.4E-11 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1138 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF01610 Transposase 157 391 3.6E-72 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1138 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 93 142 4.4E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1138 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 46 87 4.4E-11 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_2728 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF01610 Transposase 157 391 3.6E-72 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_2728 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 93 142 4.4E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_2728 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 46 87 4.4E-11 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1570 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF01610 Transposase 157 391 3.6E-72 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1570 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 93 142 4.4E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1570 a2cff3da4aa7c13a7cd5df5f9bee3dce 405 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 46 87 4.4E-11 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1556 b382513a037a47e8f915a194b3757476 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 142 237 1.3E-9 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atc_1556 b382513a037a47e8f915a194b3757476 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Atc_1556 b382513a037a47e8f915a194b3757476 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 6.9E-110 T 13-10-2018 IPR022522 Flagellar motor stator, MotA Atc_2339 1572815e12179044234c7bada5841c28 445 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 26 445 8.8E-34 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Atc_2339 1572815e12179044234c7bada5841c28 445 Gene3D G3DSA:2.40.160.60 27 444 2.4E-77 T 13-10-2018 Atc_2339 1572815e12179044234c7bada5841c28 445 SUPERFAMILY SSF56935 28 445 4.3E-49 T 13-10-2018 Atc_1466 756e02c98d95812b06630cac823b139e 245 Pfam PF02107 Flagellar L-ring protein 60 244 4.8E-58 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atc_1466 756e02c98d95812b06630cac823b139e 245 PRINTS PR01008 Flagellar L-ring protein signature 206 220 2.3E-23 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atc_1466 756e02c98d95812b06630cac823b139e 245 PRINTS PR01008 Flagellar L-ring protein signature 222 236 2.3E-23 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atc_1466 756e02c98d95812b06630cac823b139e 245 PRINTS PR01008 Flagellar L-ring protein signature 159 174 2.3E-23 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atc_1466 756e02c98d95812b06630cac823b139e 245 PRINTS PR01008 Flagellar L-ring protein signature 82 94 2.3E-23 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atc_1466 756e02c98d95812b06630cac823b139e 245 PRINTS PR01008 Flagellar L-ring protein signature 185 201 2.3E-23 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atc_1466 756e02c98d95812b06630cac823b139e 245 Hamap MF_00415 Flagellar L-ring protein [flgH]. 16 243 25.193 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atc_1439 2f5bf957e2c9cd13a08220470daa03e9 798 Pfam PF09137 Glucodextranase, domain N 14 272 2.1E-71 T 13-10-2018 IPR015220 Glucodextranase, N-terminal KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 Atc_1439 2f5bf957e2c9cd13a08220470daa03e9 798 Gene3D G3DSA:1.50.10.10 282 698 1.1E-151 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Atc_1439 2f5bf957e2c9cd13a08220470daa03e9 798 ProSitePatterns PS00820 Glucoamylase active site region signature. 430 440 - T 13-10-2018 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 Atc_1439 2f5bf957e2c9cd13a08220470daa03e9 798 SUPERFAMILY SSF48208 286 695 4.56E-72 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Atc_1439 2f5bf957e2c9cd13a08220470daa03e9 798 Gene3D G3DSA:2.70.98.10 7 273 3.0E-63 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Atc_1439 2f5bf957e2c9cd13a08220470daa03e9 798 SUPERFAMILY SSF74650 8 272 1.4E-52 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atc_1439 2f5bf957e2c9cd13a08220470daa03e9 798 Pfam PF00723 Glycosyl hydrolases family 15 377 629 3.6E-11 T 13-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Atc_1439 2f5bf957e2c9cd13a08220470daa03e9 798 Pfam PF00723 Glycosyl hydrolases family 15 291 357 2.2E-5 T 13-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Atc_1128 ad2bdce3697285a0132ad50c0aed7e4b 466 Gene3D G3DSA:1.20.1250.20 3 225 3.4E-36 T 13-10-2018 Atc_1128 ad2bdce3697285a0132ad50c0aed7e4b 466 Pfam PF07690 Major Facilitator Superfamily 21 401 6.0E-27 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_1128 ad2bdce3697285a0132ad50c0aed7e4b 466 SUPERFAMILY SSF103473 12 446 1.26E-47 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_1128 ad2bdce3697285a0132ad50c0aed7e4b 466 Gene3D G3DSA:1.20.1250.20 250 444 2.3E-45 T 13-10-2018 Atc_0849 a168e35f1c477500ad45970ac041e784 781 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 35 781 3.7E-256 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Gene3D G3DSA:3.10.20.310 31 102 3.7E-19 T 13-10-2018 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Gene3D G3DSA:3.10.20.310 186 275 2.9E-21 T 13-10-2018 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Pfam PF01103 Surface antigen 459 781 5.8E-63 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Pfam PF07244 Surface antigen variable number repeat 36 101 2.0E-5 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Pfam PF07244 Surface antigen variable number repeat 187 274 1.9E-15 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Pfam PF07244 Surface antigen variable number repeat 358 432 5.9E-13 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Pfam PF07244 Surface antigen variable number repeat 104 183 4.3E-10 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Pfam PF07244 Surface antigen variable number repeat 277 355 2.3E-15 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Gene3D G3DSA:3.10.20.310 359 435 1.1E-23 T 13-10-2018 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Gene3D G3DSA:3.10.20.310 103 183 3.3E-16 T 13-10-2018 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 10 781 23.875 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Gene3D G3DSA:3.10.20.310 278 354 6.9E-20 T 13-10-2018 Atc_0849 a168e35f1c477500ad45970ac041e784 781 Gene3D G3DSA:2.40.160.50 436 781 7.9E-94 T 13-10-2018 Atc_0849 a168e35f1c477500ad45970ac041e784 781 PIRSF PIRSF006076 2 781 6.7E-242 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Atc_2520 5a464334fbe8606350d0b6e4b8b6dff7 134 PIRSF PIRSF000087 2 126 2.3E-23 T 13-10-2018 IPR012130 Photoactive yellow-protein GO:0007602|GO:0009881|GO:0018298 Atc_2520 5a464334fbe8606350d0b6e4b8b6dff7 134 SUPERFAMILY SSF55785 18 119 9.95E-18 T 13-10-2018 IPR035965 PAS domain superfamily Atc_2520 5a464334fbe8606350d0b6e4b8b6dff7 134 Pfam PF00989 PAS fold 20 117 2.6E-8 T 13-10-2018 IPR013767 PAS fold GO:0006355 Atc_2520 5a464334fbe8606350d0b6e4b8b6dff7 134 Gene3D G3DSA:3.30.450.20 5 125 1.5E-33 T 13-10-2018 Atc_1723 4824122e72eeaa774bbdca8fc87df054 202 Pfam PF00717 Peptidase S24-like 114 179 4.4E-13 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Atc_1723 4824122e72eeaa774bbdca8fc87df054 202 Gene3D G3DSA:1.10.10.10 1 70 5.4E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1723 4824122e72eeaa774bbdca8fc87df054 202 SUPERFAMILY SSF51306 77 197 1.17E-31 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Atc_1723 4824122e72eeaa774bbdca8fc87df054 202 Pfam PF01726 LexA DNA binding domain 1 65 1.2E-23 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Atc_1723 4824122e72eeaa774bbdca8fc87df054 202 Gene3D G3DSA:2.10.109.10 81 201 9.8E-40 T 13-10-2018 Atc_1723 4824122e72eeaa774bbdca8fc87df054 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 31.294 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Atc_1723 4824122e72eeaa774bbdca8fc87df054 202 SUPERFAMILY SSF46785 3 69 8.75E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1723 4824122e72eeaa774bbdca8fc87df054 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 198 1.5E-65 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Atc_1723 4824122e72eeaa774bbdca8fc87df054 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 9.4E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Atc_1723 4824122e72eeaa774bbdca8fc87df054 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 9.4E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Atc_1723 4824122e72eeaa774bbdca8fc87df054 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 9.4E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 Gene3D G3DSA:1.10.530.10 164 303 8.7E-42 T 13-10-2018 Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 21 303 5.0E-69 T 13-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 SUPERFAMILY SSF53955 155 301 1.05E-5 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 174 302 2.3E-19 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 PRINTS PR01002 Flagellar protein FlgJ signature 287 305 9.8E-26 T 13-10-2018 Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 PRINTS PR01002 Flagellar protein FlgJ signature 200 221 9.8E-26 T 13-10-2018 Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 PRINTS PR01002 Flagellar protein FlgJ signature 244 265 9.8E-26 T 13-10-2018 Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 PRINTS PR01002 Flagellar protein FlgJ signature 222 243 9.8E-26 T 13-10-2018 Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 PRINTS PR01002 Flagellar protein FlgJ signature 80 102 9.8E-26 T 13-10-2018 Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 PRINTS PR01002 Flagellar protein FlgJ signature 34 57 9.8E-26 T 13-10-2018 Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 Pfam PF10135 Rod binding protein 57 102 2.9E-9 T 13-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Atc_1468 50d2a94d3029901841f223eb8945f3ed 319 SMART SM00047 153 314 5.1E-23 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Atc_0279 5b23ddc65b3ef00fb5f253ff022f3b20 326 Gene3D G3DSA:3.40.50.970 2 188 5.1E-78 T 13-10-2018 Atc_0279 5b23ddc65b3ef00fb5f253ff022f3b20 326 Pfam PF02780 Transketolase, C-terminal domain 195 316 8.9E-36 T 13-10-2018 IPR033248 Transketolase, C-terminal domain Atc_0279 5b23ddc65b3ef00fb5f253ff022f3b20 326 SMART SM00861 4 179 1.1E-61 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atc_0279 5b23ddc65b3ef00fb5f253ff022f3b20 326 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 4.3E-47 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atc_0279 5b23ddc65b3ef00fb5f253ff022f3b20 326 Gene3D G3DSA:3.40.50.920 189 325 1.1E-39 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atc_0279 5b23ddc65b3ef00fb5f253ff022f3b20 326 SUPERFAMILY SSF52518 2 203 6.96E-65 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_0279 5b23ddc65b3ef00fb5f253ff022f3b20 326 SUPERFAMILY SSF52922 188 324 4.45E-36 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 247 308 1.4E-12 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 SUPERFAMILY SSF47226 2 121 2.62E-29 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 Gene3D G3DSA:2.40.50.180 520 580 7.4E-21 T 13-10-2018 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 SMART SM00073 2 99 8.4E-23 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 Pfam PF01584 CheW-like domain 502 626 3.6E-10 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 SUPERFAMILY SSF50341 496 624 8.24E-15 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 SMART SM00387 354 497 1.3E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 SMART SM00260 489 624 2.6E-12 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 496 1.1E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 Gene3D G3DSA:1.10.287.560 247 309 1.1E-13 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 SUPERFAMILY SSF55874 313 495 1.7E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 Gene3D G3DSA:2.30.30.40 497 619 7.4E-21 T 13-10-2018 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 SUPERFAMILY SSF47384 248 310 2.71E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 Pfam PF01627 Hpt domain 4 99 6.0E-16 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 1.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 494 1.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 1.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 1.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 Gene3D G3DSA:3.30.565.10 310 496 2.5E-53 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 SMART SM01231 247 309 2.1E-14 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Atc_1449 c537ab663950b6fd6a42316fd4093b88 641 Gene3D G3DSA:1.20.120.160 2 141 6.6E-35 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 623 738 5.1E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0017 1fddb159f262989fbe7fd33362941a16 751 SUPERFAMILY SSF55785 379 501 4.38E-13 T 13-10-2018 IPR035965 PAS domain superfamily Atc_0017 1fddb159f262989fbe7fd33362941a16 751 Pfam PF00672 HAMP domain 326 374 5.4E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 SUPERFAMILY SSF158472 326 374 3.79E-7 T 13-10-2018 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 SUPERFAMILY SSF55874 580 739 3.27E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0017 1fddb159f262989fbe7fd33362941a16 751 SUPERFAMILY SSF47384 506 579 2.75E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 PIRSF PIRSF037532 20 743 5.7E-208 T 13-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator Atc_0017 1fddb159f262989fbe7fd33362941a16 751 SMART SM00304 326 378 4.8E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 Gene3D G3DSA:3.30.565.10 582 748 2.8E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0017 1fddb159f262989fbe7fd33362941a16 751 Gene3D G3DSA:1.20.1480.50 296 379 2.4E-9 T 13-10-2018 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 Pfam PF13188 PAS domain 393 430 4.4E-5 T 13-10-2018 IPR000014 PAS domain Atc_0017 1fddb159f262989fbe7fd33362941a16 751 SMART SM00387 622 739 5.2E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0017 1fddb159f262989fbe7fd33362941a16 751 Pfam PF00512 His Kinase A (phospho-acceptor) domain 513 578 2.9E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 Gene3D G3DSA:3.30.450.20 380 500 8.8E-11 T 13-10-2018 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 SMART SM00388 511 582 8.8E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 683 5.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 698 716 5.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 687 697 5.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0017 1fddb159f262989fbe7fd33362941a16 751 Gene3D G3DSA:1.10.287.130 501 579 1.8E-10 T 13-10-2018 Atc_1498 888337a48cc4f68d58c13d8dfd309420 384 SUPERFAMILY SSF52540 172 358 3.05E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1498 888337a48cc4f68d58c13d8dfd309420 384 SMART SM00962 173 364 3.5E-33 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atc_1498 888337a48cc4f68d58c13d8dfd309420 384 SMART SM00382 172 352 0.0021 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1498 888337a48cc4f68d58c13d8dfd309420 384 Gene3D G3DSA:1.20.120.1380 151 354 2.2E-48 T 13-10-2018 Atc_1498 888337a48cc4f68d58c13d8dfd309420 384 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 261 2.0E-62 T 13-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 Atc_1498 888337a48cc4f68d58c13d8dfd309420 384 Pfam PF00448 SRP54-type protein, GTPase domain 176 359 7.2E-29 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atc_1498 888337a48cc4f68d58c13d8dfd309420 384 Gene3D G3DSA:3.40.50.300 169 353 2.2E-48 T 13-10-2018 Atc_2130 61f0cfa7cb708811696c5eb63f3c24a7 903 SUPERFAMILY SSF52540 375 765 2.76E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2130 61f0cfa7cb708811696c5eb63f3c24a7 903 Pfam PF00271 Helicase conserved C-terminal domain 622 726 3.9E-5 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_2130 61f0cfa7cb708811696c5eb63f3c24a7 903 SMART SM00487 54 440 3.0E-5 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_2130 61f0cfa7cb708811696c5eb63f3c24a7 903 Gene3D G3DSA:3.40.50.300 526 808 2.0E-21 T 13-10-2018 Atc_2130 61f0cfa7cb708811696c5eb63f3c24a7 903 Gene3D G3DSA:3.40.50.300 53 170 2.4E-6 T 13-10-2018 Atc_2130 61f0cfa7cb708811696c5eb63f3c24a7 903 SUPERFAMILY SSF52540 50 415 6.89E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 SUPERFAMILY SSF52113 576 654 4.3E-17 T 13-10-2018 IPR036420 BRCT domain superfamily Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Pfam PF12826 Helix-hairpin-helix motif 497 560 4.2E-24 T 13-10-2018 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 SMART SM00532 2 435 5.8E-241 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 SUPERFAMILY SSF56091 3 303 2.67E-110 T 13-10-2018 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 394 421 5.0E-10 T 13-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Gene3D G3DSA:1.10.287.610 2 56 4.7E-22 T 13-10-2018 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 SMART SM00278 467 486 2.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 SMART SM00278 499 518 1100.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 SMART SM00278 433 452 120.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 SMART SM00278 531 550 0.065 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Gene3D G3DSA:2.20.70.80 378 417 3.4E-15 T 13-10-2018 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 3 647 1.2E-246 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 PIRSF PIRSF001604 2 657 1.7E-234 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 SMART SM00292 578 655 1.4E-14 T 13-10-2018 IPR001357 BRCT domain Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 579 651 3.5E-10 T 13-10-2018 IPR001357 BRCT domain Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 309 384 6.4E-33 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 318 333 - T 13-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Hamap MF_01588 DNA ligase [ligA]. 1 652 50.927 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 SUPERFAMILY SSF47781 391 570 8.9E-63 T 13-10-2018 IPR010994 RuvA domain 2-like Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 103 132 - T 13-10-2018 IPR018239 NAD-dependent DNA ligase, active site Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 SUPERFAMILY SSF50249 305 387 1.05E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Gene3D G3DSA:2.40.50.140 305 377 7.9E-31 T 13-10-2018 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 304 3.4E-114 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Gene3D G3DSA:3.40.50.10190 570 654 2.2E-23 T 13-10-2018 IPR036420 BRCT domain superfamily Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Gene3D G3DSA:1.10.150.20 419 492 7.6E-28 T 13-10-2018 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Gene3D G3DSA:3.30.470.90 57 304 2.7E-90 T 13-10-2018 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Gene3D G3DSA:1.10.150.20 493 569 8.0E-32 T 13-10-2018 Atc_1697 c27401cfd0a37f10f899fa6f49255776 659 Pfam PF14520 Helix-hairpin-helix domain 433 487 4.5E-10 T 13-10-2018 Atc_2223 3ae50cf8917ff29885002d730d9811cc 261 Pfam PF01695 IstB-like ATP binding protein 53 230 3.2E-50 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_2223 3ae50cf8917ff29885002d730d9811cc 261 Gene3D G3DSA:3.40.50.300 61 242 4.7E-41 T 13-10-2018 Atc_2223 3ae50cf8917ff29885002d730d9811cc 261 PIRSF PIRSF003073 1 245 8.5E-67 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_2223 3ae50cf8917ff29885002d730d9811cc 261 SUPERFAMILY SSF52540 66 223 2.59E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2085 3ae50cf8917ff29885002d730d9811cc 261 Pfam PF01695 IstB-like ATP binding protein 53 230 3.2E-50 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_2085 3ae50cf8917ff29885002d730d9811cc 261 Gene3D G3DSA:3.40.50.300 61 242 4.7E-41 T 13-10-2018 Atc_2085 3ae50cf8917ff29885002d730d9811cc 261 PIRSF PIRSF003073 1 245 8.5E-67 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_2085 3ae50cf8917ff29885002d730d9811cc 261 SUPERFAMILY SSF52540 66 223 2.59E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1141 3ae50cf8917ff29885002d730d9811cc 261 Pfam PF01695 IstB-like ATP binding protein 53 230 3.2E-50 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_1141 3ae50cf8917ff29885002d730d9811cc 261 Gene3D G3DSA:3.40.50.300 61 242 4.7E-41 T 13-10-2018 Atc_1141 3ae50cf8917ff29885002d730d9811cc 261 PIRSF PIRSF003073 1 245 8.5E-67 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_1141 3ae50cf8917ff29885002d730d9811cc 261 SUPERFAMILY SSF52540 66 223 2.59E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1065 3ae50cf8917ff29885002d730d9811cc 261 Pfam PF01695 IstB-like ATP binding protein 53 230 3.2E-50 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_1065 3ae50cf8917ff29885002d730d9811cc 261 Gene3D G3DSA:3.40.50.300 61 242 4.7E-41 T 13-10-2018 Atc_1065 3ae50cf8917ff29885002d730d9811cc 261 PIRSF PIRSF003073 1 245 8.5E-67 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_1065 3ae50cf8917ff29885002d730d9811cc 261 SUPERFAMILY SSF52540 66 223 2.59E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0204 3ae50cf8917ff29885002d730d9811cc 261 Pfam PF01695 IstB-like ATP binding protein 53 230 3.2E-50 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_0204 3ae50cf8917ff29885002d730d9811cc 261 Gene3D G3DSA:3.40.50.300 61 242 4.7E-41 T 13-10-2018 Atc_0204 3ae50cf8917ff29885002d730d9811cc 261 PIRSF PIRSF003073 1 245 8.5E-67 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_0204 3ae50cf8917ff29885002d730d9811cc 261 SUPERFAMILY SSF52540 66 223 2.59E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1565 3ae50cf8917ff29885002d730d9811cc 261 Pfam PF01695 IstB-like ATP binding protein 53 230 3.2E-50 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_1565 3ae50cf8917ff29885002d730d9811cc 261 Gene3D G3DSA:3.40.50.300 61 242 4.7E-41 T 13-10-2018 Atc_1565 3ae50cf8917ff29885002d730d9811cc 261 PIRSF PIRSF003073 1 245 8.5E-67 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_1565 3ae50cf8917ff29885002d730d9811cc 261 SUPERFAMILY SSF52540 66 223 2.59E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m163 3ae50cf8917ff29885002d730d9811cc 261 Pfam PF01695 IstB-like ATP binding protein 53 230 3.2E-50 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_m163 3ae50cf8917ff29885002d730d9811cc 261 Gene3D G3DSA:3.40.50.300 61 242 4.7E-41 T 13-10-2018 Atc_m163 3ae50cf8917ff29885002d730d9811cc 261 PIRSF PIRSF003073 1 245 8.5E-67 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_m163 3ae50cf8917ff29885002d730d9811cc 261 SUPERFAMILY SSF52540 66 223 2.59E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1814 3ae50cf8917ff29885002d730d9811cc 261 Pfam PF01695 IstB-like ATP binding protein 53 230 3.2E-50 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_1814 3ae50cf8917ff29885002d730d9811cc 261 Gene3D G3DSA:3.40.50.300 61 242 4.7E-41 T 13-10-2018 Atc_1814 3ae50cf8917ff29885002d730d9811cc 261 PIRSF PIRSF003073 1 245 8.5E-67 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_1814 3ae50cf8917ff29885002d730d9811cc 261 SUPERFAMILY SSF52540 66 223 2.59E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 Gene3D G3DSA:3.50.50.60 222 338 1.3E-102 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 415 520 2.5E-29 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 Gene3D G3DSA:3.30.390.30 413 538 2.7E-43 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 PIRSF PIRSF000350 2 538 9.2E-216 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 PRINTS PR00945 Mercuric reductase class II signature 214 231 1.5E-67 T 13-10-2018 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 PRINTS PR00945 Mercuric reductase class II signature 511 530 1.5E-67 T 13-10-2018 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 PRINTS PR00945 Mercuric reductase class II signature 88 106 1.5E-67 T 13-10-2018 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 PRINTS PR00945 Mercuric reductase class II signature 249 266 1.5E-67 T 13-10-2018 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 PRINTS PR00945 Mercuric reductase class II signature 269 284 1.5E-67 T 13-10-2018 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 PRINTS PR00945 Mercuric reductase class II signature 446 466 1.5E-67 T 13-10-2018 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 PRINTS PR00945 Mercuric reductase class II signature 16 26 1.5E-67 T 13-10-2018 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 PRINTS PR00945 Mercuric reductase class II signature 123 142 1.5E-67 T 13-10-2018 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 Gene3D G3DSA:3.30.70.100 5 67 3.5E-17 T 13-10-2018 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 78 395 2.3E-61 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 Gene3D G3DSA:3.50.50.60 80 396 1.3E-102 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 Pfam PF00403 Heavy-metal-associated domain 9 65 1.0E-9 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 111 121 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 SUPERFAMILY SSF55008 5 67 1.09E-14 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 SUPERFAMILY SSF51905 79 432 4.32E-47 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 TIGRFAM TIGR02053 MerA: mercury(II) reductase 78 538 1.2E-163 T 13-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 Atc_1726 2ac41f4c56864b19430a7356fb13ee41 538 SUPERFAMILY SSF55424 410 536 3.44E-33 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_2521 738025970483edfc564aefe47941d8d7 314 Pfam PF13411 MerR HTH family regulatory protein 19 75 4.9E-11 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_2521 738025970483edfc564aefe47941d8d7 314 Gene3D G3DSA:1.10.1660.10 13 82 1.1E-19 T 13-10-2018 Atc_2521 738025970483edfc564aefe47941d8d7 314 SUPERFAMILY SSF46955 18 76 9.61E-12 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Atc_2521 738025970483edfc564aefe47941d8d7 314 SMART SM00422 18 91 8.0E-4 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 23 927 16.522 T 13-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 Gene3D G3DSA:1.20.120.330 268 420 3.4E-49 T 13-10-2018 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 SUPERFAMILY SSF81301 506 792 7.85E-75 T 13-10-2018 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 SUPERFAMILY SSF81593 795 925 5.1E-19 T 13-10-2018 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 Gene3D G3DSA:3.30.460.100 35 262 1.4E-67 T 13-10-2018 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 Gene3D G3DSA:3.30.460.100 543 789 1.6E-79 T 13-10-2018 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 Gene3D G3DSA:1.20.120.1510 428 542 1.8E-13 T 13-10-2018 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 540 782 5.7E-72 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 29 259 8.1E-61 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 Gene3D G3DSA:1.20.120.330 791 927 2.3E-22 T 13-10-2018 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 Pfam PF08335 GlnD PII-uridylyltransferase 295 416 1.2E-37 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 Pfam PF08335 GlnD PII-uridylyltransferase 806 890 3.0E-8 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 SUPERFAMILY SSF81301 18 268 8.99E-70 T 13-10-2018 Atc_1971 aae985bf016acd829ed3d7b54652457f 933 SUPERFAMILY SSF81593 270 417 5.18E-39 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 SUPERFAMILY SSF82693 42 124 4.45E-9 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 Gene3D G3DSA:3.30.70.1430 559 659 5.0E-197 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 SUPERFAMILY SSF82866 295 495 4.97E-33 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 Gene3D G3DSA:3.30.70.1320 133 329 5.0E-197 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 Gene3D G3DSA:3.30.70.1430 42 805 5.0E-197 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 SUPERFAMILY SSF82693 556 644 1.28E-9 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 Gene3D G3DSA:3.30.70.1440 660 855 5.0E-197 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 Gene3D G3DSA:3.30.2090.10 178 275 5.0E-197 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 SUPERFAMILY SSF82866 797 1014 9.02E-39 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 5.7E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 5.7E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 5.7E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 5.7E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 5.7E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 5.7E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 SUPERFAMILY SSF82693 139 329 2.38E-13 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 Gene3D G3DSA:3.30.2090.10 710 797 5.0E-197 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 Gene3D G3DSA:1.20.1640.10 15 502 5.0E-197 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 Gene3D G3DSA:1.20.1640.10 503 1009 5.0E-197 T 13-10-2018 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 SUPERFAMILY SSF82714 181 245 1.06E-6 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 Pfam PF00873 AcrB/AcrD/AcrF family 11 1010 3.5E-176 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0707 70e5c5f48a87ebaacebce3745d74e06d 1022 SUPERFAMILY SSF82714 720 792 2.22E-9 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_2507 d1931023cbcbf7a442f8a731fbb35e9d 346 SUPERFAMILY SSF46785 3 85 3.56E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_2507 d1931023cbcbf7a442f8a731fbb35e9d 346 SUPERFAMILY SSF55781 72 340 4.77E-60 T 13-10-2018 Atc_2507 d1931023cbcbf7a442f8a731fbb35e9d 346 Gene3D G3DSA:1.10.10.10 1 84 3.7E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2507 d1931023cbcbf7a442f8a731fbb35e9d 346 Pfam PF01628 HrcA protein C terminal domain 105 324 4.0E-57 T 13-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Atc_2507 d1931023cbcbf7a442f8a731fbb35e9d 346 Gene3D G3DSA:3.30.450.40 105 336 2.5E-39 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_2507 d1931023cbcbf7a442f8a731fbb35e9d 346 Gene3D G3DSA:3.30.390.60 129 229 2.5E-39 T 13-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Atc_2507 d1931023cbcbf7a442f8a731fbb35e9d 346 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 2 331 27.259 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Atc_2507 d1931023cbcbf7a442f8a731fbb35e9d 346 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 5 337 9.6E-90 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Atc_2507 d1931023cbcbf7a442f8a731fbb35e9d 346 PIRSF PIRSF005485 1 342 1.5E-98 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Atc_2046 29e7e0d07325b17c84d25ec773cc7ed2 400 Gene3D G3DSA:1.20.81.30 53 164 3.2E-12 T 13-10-2018 Atc_2046 29e7e0d07325b17c84d25ec773cc7ed2 400 Pfam PF00482 Type II secretion system (T2SS), protein F 72 188 5.8E-14 T 13-10-2018 IPR018076 Type II secretion system F domain Atc_0716 bcbfacd8cbfa44b4397af3b4e65af26d 362 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 15 349 2.0E-72 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atc_0925 5f36b013180807b3d71f5c6d7ba4ebbd 302 Pfam PF03466 LysR substrate binding domain 94 295 2.9E-49 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_0925 5f36b013180807b3d71f5c6d7ba4ebbd 302 SUPERFAMILY SSF46785 2 87 2.14E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0925 5f36b013180807b3d71f5c6d7ba4ebbd 302 Gene3D G3DSA:1.10.10.10 5 95 2.1E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0925 5f36b013180807b3d71f5c6d7ba4ebbd 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_0925 5f36b013180807b3d71f5c6d7ba4ebbd 302 Gene3D G3DSA:3.40.190.290 96 299 2.1E-43 T 13-10-2018 Atc_0925 5f36b013180807b3d71f5c6d7ba4ebbd 302 SUPERFAMILY SSF53850 95 295 1.27E-42 T 13-10-2018 Atc_1514 261720efceef8479e82ccdc10c281679 488 PIRSF PIRSF000130 1 488 4.7E-201 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Atc_1514 261720efceef8479e82ccdc10c281679 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Atc_1514 261720efceef8479e82ccdc10c281679 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 455 2.6E-189 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Atc_1514 261720efceef8479e82ccdc10c281679 488 Pfam PF00571 CBS domain 94 138 2.5E-10 T 13-10-2018 IPR000644 CBS domain Atc_1514 261720efceef8479e82ccdc10c281679 488 Pfam PF00571 CBS domain 147 202 8.7E-7 T 13-10-2018 IPR000644 CBS domain Atc_1514 261720efceef8479e82ccdc10c281679 488 SMART SM00116 95 142 4.9E-11 T 13-10-2018 IPR000644 CBS domain Atc_1514 261720efceef8479e82ccdc10c281679 488 SMART SM00116 156 204 1.2E-8 T 13-10-2018 IPR000644 CBS domain Atc_1514 261720efceef8479e82ccdc10c281679 488 SUPERFAMILY SSF54631 93 202 6.34E-28 T 13-10-2018 Atc_1514 261720efceef8479e82ccdc10c281679 488 SMART SM01240 6 474 0.0 T 13-10-2018 Atc_1514 261720efceef8479e82ccdc10c281679 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 487 83.519 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Atc_1514 261720efceef8479e82ccdc10c281679 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 474 2.1E-161 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Atc_1514 261720efceef8479e82ccdc10c281679 488 SUPERFAMILY SSF51412 4 478 7.46E-124 T 13-10-2018 Atc_1514 261720efceef8479e82ccdc10c281679 488 Gene3D G3DSA:3.20.20.70 1 487 3.7E-211 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0637 0c566526427fc600110e319c4022905b 130 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 118 2.1E-20 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atc_0637 0c566526427fc600110e319c4022905b 130 Gene3D G3DSA:1.20.1290.10 2 125 1.1E-42 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atc_0637 0c566526427fc600110e319c4022905b 130 SUPERFAMILY SSF69118 3 125 4.03E-37 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atc_2195 cea1461110284dbbcbb0fae777bc0332 519 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 24 505 2.2E-120 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Atc_2195 cea1461110284dbbcbb0fae777bc0332 519 SUPERFAMILY SSF103473 11 507 6.8E-70 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_2195 cea1461110284dbbcbb0fae777bc0332 519 PRINTS PR01036 Tetracycline resistance protein TetB signature 414 433 1.1E-5 T 13-10-2018 Atc_2195 cea1461110284dbbcbb0fae777bc0332 519 PRINTS PR01036 Tetracycline resistance protein TetB signature 149 173 1.1E-5 T 13-10-2018 Atc_2195 cea1461110284dbbcbb0fae777bc0332 519 PRINTS PR01036 Tetracycline resistance protein TetB signature 28 52 1.1E-5 T 13-10-2018 Atc_2195 cea1461110284dbbcbb0fae777bc0332 519 PRINTS PR01036 Tetracycline resistance protein TetB signature 119 139 1.1E-5 T 13-10-2018 Atc_2195 cea1461110284dbbcbb0fae777bc0332 519 Gene3D G3DSA:1.20.1250.20 271 510 8.5E-14 T 13-10-2018 Atc_2195 cea1461110284dbbcbb0fae777bc0332 519 Pfam PF07690 Major Facilitator Superfamily 30 423 2.5E-59 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_2195 cea1461110284dbbcbb0fae777bc0332 519 Gene3D G3DSA:1.20.1720.10 25 233 3.1E-52 T 13-10-2018 Atc_1p01 bc96c25a85b5bea115553cc891edb842 843 Gene3D G3DSA:3.30.70.1790 535 720 6.8E-45 T 13-10-2018 Atc_1p01 bc96c25a85b5bea115553cc891edb842 843 Pfam PF16793 RepB DNA-primase from phage plasmid 542 761 1.3E-70 T 13-10-2018 IPR039459 RepB-like DNA primase domain Atc_1p01 bc96c25a85b5bea115553cc891edb842 843 Pfam PF03432 Relaxase/Mobilisation nuclease domain 10 268 6.3E-33 T 13-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 Atc_1758 0bab325cc836eb6a5bfe38574d240a69 395 Pfam PF01494 FAD binding domain 9 344 3.8E-18 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 Atc_1758 0bab325cc836eb6a5bfe38574d240a69 395 Gene3D G3DSA:3.50.50.60 8 342 8.5E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1758 0bab325cc836eb6a5bfe38574d240a69 395 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 394 1.6E-106 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Atc_1758 0bab325cc836eb6a5bfe38574d240a69 395 Gene3D G3DSA:3.30.9.50 79 273 8.5E-84 T 13-10-2018 Atc_1758 0bab325cc836eb6a5bfe38574d240a69 395 SUPERFAMILY SSF51905 6 389 2.04E-45 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1758 0bab325cc836eb6a5bfe38574d240a69 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 2.2E-8 T 13-10-2018 Atc_1758 0bab325cc836eb6a5bfe38574d240a69 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 2.2E-8 T 13-10-2018 Atc_1758 0bab325cc836eb6a5bfe38574d240a69 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 2.2E-8 T 13-10-2018 Atc_2789 68964459fb11e3daeb7348b71544a0c3 85 SMART SM00834 1 42 5.3E-16 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Atc_2789 68964459fb11e3daeb7348b71544a0c3 85 Pfam PF09723 Zinc ribbon domain 1 40 5.3E-15 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Atc_2789 68964459fb11e3daeb7348b71544a0c3 85 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 5.1E-20 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Atc_1739 37b95130bfffca524bdb9fefd8b4df77 189 Gene3D G3DSA:3.40.30.10 4 188 3.6E-50 T 13-10-2018 Atc_1739 37b95130bfffca524bdb9fefd8b4df77 189 Pfam PF00578 AhpC/TSA family 11 132 1.3E-16 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atc_1739 37b95130bfffca524bdb9fefd8b4df77 189 SUPERFAMILY SSF52833 8 186 1.28E-44 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2233 f39374572030b8429c5081fcdb82a3ac 338 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 10 302 2.5E-13 T 13-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Atc_2233 f39374572030b8429c5081fcdb82a3ac 338 TIGRFAM TIGR03476 HpnL: putative membrane protein 5 319 4.2E-100 T 13-10-2018 Atc_2233 f39374572030b8429c5081fcdb82a3ac 338 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 9 309 2.1E-35 T 13-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Atc_2299 69954d2cdce49284999f313976c995d1 232 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 220 7.9E-71 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Atc_2299 69954d2cdce49284999f313976c995d1 232 Pfam PF14622 Ribonuclease-III-like 17 140 1.1E-33 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Atc_2299 69954d2cdce49284999f313976c995d1 232 SUPERFAMILY SSF69065 2 157 1.38E-46 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Atc_2299 69954d2cdce49284999f313976c995d1 232 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 217 28.602 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Atc_2299 69954d2cdce49284999f313976c995d1 232 SUPERFAMILY SSF54768 107 223 4.63E-26 T 13-10-2018 Atc_2299 69954d2cdce49284999f313976c995d1 232 ProSitePatterns PS00517 Ribonuclease III family signature. 36 44 - T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Atc_2299 69954d2cdce49284999f313976c995d1 232 Gene3D G3DSA:1.10.1520.10 1 146 1.3E-43 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Atc_2299 69954d2cdce49284999f313976c995d1 232 Pfam PF00035 Double-stranded RNA binding motif 154 220 3.2E-14 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain Atc_2299 69954d2cdce49284999f313976c995d1 232 SMART SM00535 19 147 5.6E-46 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Atc_2299 69954d2cdce49284999f313976c995d1 232 Gene3D G3DSA:3.30.160.20 152 230 3.2E-20 T 13-10-2018 Atc_2299 69954d2cdce49284999f313976c995d1 232 SMART SM00358 154 221 8.0E-20 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain Atc_1383 cf1a9e28c5fd99cc8ae566521283cfae 432 Gene3D G3DSA:3.30.750.80 79 184 5.2E-30 T 13-10-2018 Atc_1383 cf1a9e28c5fd99cc8ae566521283cfae 432 SUPERFAMILY SSF88697 7 77 3.73E-10 T 13-10-2018 IPR015947 PUA-like superfamily Atc_1383 cf1a9e28c5fd99cc8ae566521283cfae 432 Gene3D G3DSA:2.30.130.10 7 78 1.1E-18 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Atc_1383 cf1a9e28c5fd99cc8ae566521283cfae 432 SUPERFAMILY SSF53335 88 390 1.76E-68 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1383 cf1a9e28c5fd99cc8ae566521283cfae 432 Gene3D G3DSA:3.40.50.150 185 400 6.5E-64 T 13-10-2018 Atc_1383 cf1a9e28c5fd99cc8ae566521283cfae 432 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 358 3.8E-16 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Atc_0172 fd144eb051e071a053808e0c52a7ced4 464 Pfam PF13751 Transposase DDE domain 322 447 1.4E-19 T 13-10-2018 IPR025668 Transposase DDE domain Atc_0172 fd144eb051e071a053808e0c52a7ced4 464 Pfam PF05598 Transposase domain (DUF772) 52 127 4.5E-26 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_2199 2e9e4a3351de6460fcd852daed5ae407 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 174 182 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_2199 2e9e4a3351de6460fcd852daed5ae407 239 Gene3D G3DSA:3.30.470.20 86 221 2.0E-88 T 13-10-2018 Atc_2199 2e9e4a3351de6460fcd852daed5ae407 239 SUPERFAMILY SSF56104 7 233 4.58E-77 T 13-10-2018 Atc_2199 2e9e4a3351de6460fcd852daed5ae407 239 Pfam PF01259 SAICAR synthetase 8 231 6.5E-61 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_2199 2e9e4a3351de6460fcd852daed5ae407 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 5 235 30.426 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_2199 2e9e4a3351de6460fcd852daed5ae407 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 7 236 7.9E-70 T 13-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Atc_2199 2e9e4a3351de6460fcd852daed5ae407 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 87 101 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_2199 2e9e4a3351de6460fcd852daed5ae407 239 Gene3D G3DSA:3.30.200.20 8 232 2.0E-88 T 13-10-2018 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 Pfam PF13432 Tetratricopeptide repeat 68 130 3.7E-6 T 13-10-2018 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 SUPERFAMILY SSF81901 64 267 7.59E-22 T 13-10-2018 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 Pfam PF13174 Tetratricopeptide repeat 236 265 0.069 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 Pfam PF13181 Tetratricopeptide repeat 168 198 7.2E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 SMART SM00028 96 129 8.8E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 SMART SM00028 62 95 1.9 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 SMART SM00028 166 199 18.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 SMART SM00028 234 267 48.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 SMART SM00028 200 233 120.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 SMART SM00028 130 162 180.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 Gene3D G3DSA:1.25.40.10 58 277 1.0E-41 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_1367 a9f833c2af16c821200d8eeaca634505 281 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 59 258 9.6E-47 T 13-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW Atc_2172 07922ad8119e08d9060c6b374f61be66 399 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atc_2172 07922ad8119e08d9060c6b374f61be66 399 PIRSF PIRSF001413 2 398 1.4E-161 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atc_2172 07922ad8119e08d9060c6b374f61be66 399 SUPERFAMILY SSF53686 7 392 9.69E-146 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Atc_2172 07922ad8119e08d9060c6b374f61be66 399 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 393 5.3E-188 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atc_2172 07922ad8119e08d9060c6b374f61be66 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 57 382 9.8E-52 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Atc_2172 07922ad8119e08d9060c6b374f61be66 399 Gene3D G3DSA:3.40.50.1100 14 210 1.3E-184 T 13-10-2018 Atc_2172 07922ad8119e08d9060c6b374f61be66 399 Gene3D G3DSA:3.40.50.1100 58 388 1.3E-184 T 13-10-2018 Atc_2172 07922ad8119e08d9060c6b374f61be66 399 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 395 51.773 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atc_2492 e6d35ced32ba0848416fc908401ec07f 125 SUPERFAMILY SSF75169 8 118 1.01E-15 T 13-10-2018 IPR027396 DsrEFH-like Atc_2492 e6d35ced32ba0848416fc908401ec07f 125 Pfam PF02635 DsrE/DsrF-like family 6 118 1.5E-9 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_2492 e6d35ced32ba0848416fc908401ec07f 125 Gene3D G3DSA:3.40.1260.10 1 123 3.0E-31 T 13-10-2018 IPR027396 DsrEFH-like Atc_m051 aff6b4db6d594f0dc7b9fe674263efa9 753 Gene3D G3DSA:3.40.50.300 189 412 2.2E-44 T 13-10-2018 Atc_m051 aff6b4db6d594f0dc7b9fe674263efa9 753 SMART SM00490 596 679 3.9E-16 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_m051 aff6b4db6d594f0dc7b9fe674263efa9 753 SUPERFAMILY SSF50249 18 148 7.37E-11 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_m051 aff6b4db6d594f0dc7b9fe674263efa9 753 SUPERFAMILY SSF52540 298 697 1.66E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m051 aff6b4db6d594f0dc7b9fe674263efa9 753 Pfam PF00271 Helicase conserved C-terminal domain 605 679 8.2E-14 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_m051 aff6b4db6d594f0dc7b9fe674263efa9 753 SMART SM00487 240 421 9.4E-19 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_m051 aff6b4db6d594f0dc7b9fe674263efa9 753 Pfam PF00270 DEAD/DEAH box helicase 265 378 7.2E-14 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atc_m051 aff6b4db6d594f0dc7b9fe674263efa9 753 Gene3D G3DSA:3.40.50.300 552 751 1.5E-37 T 13-10-2018 Atc_2864 4622bb27057f8ea3434b40db396456f4 272 Gene3D G3DSA:1.10.3900.10 32 196 7.3E-51 T 13-10-2018 Atc_2864 4622bb27057f8ea3434b40db396456f4 272 Gene3D G3DSA:2.60.440.10 26 268 7.3E-51 T 13-10-2018 IPR027462 Z ring-associated protein D, C-terminal Atc_2864 4622bb27057f8ea3434b40db396456f4 272 Hamap MF_01092 Cell division protein ZapD [zapD]. 23 270 26.173 T 13-10-2018 IPR009777 Cell division protein ZapD Atc_2864 4622bb27057f8ea3434b40db396456f4 272 SUPERFAMILY SSF160950 22 268 2.09E-53 T 13-10-2018 IPR036268 ZapD domain superfamily Atc_2864 4622bb27057f8ea3434b40db396456f4 272 Pfam PF07072 Cell division protein 38 245 6.0E-46 T 13-10-2018 IPR009777 Cell division protein ZapD Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 Gene3D G3DSA:3.30.930.10 105 421 5.4E-116 T 13-10-2018 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 PIRSF PIRSF001529 1 422 2.8E-168 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 PRINTS PR00981 Seryl-tRNA synthetase signature 261 273 1.3E-31 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 PRINTS PR00981 Seryl-tRNA synthetase signature 348 364 1.3E-31 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 PRINTS PR00981 Seryl-tRNA synthetase signature 313 326 1.3E-31 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 PRINTS PR00981 Seryl-tRNA synthetase signature 330 346 1.3E-31 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 PRINTS PR00981 Seryl-tRNA synthetase signature 273 286 1.3E-31 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 SUPERFAMILY SSF46589 1 112 2.82E-25 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 418 40.76 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 413 9.7E-158 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 SUPERFAMILY SSF55681 116 416 2.7E-98 T 13-10-2018 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 396 3.6E-32 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 4.7E-26 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Atc_2474 0e684ae413095b0b19f03dcb60b06fa1 422 Gene3D G3DSA:1.10.287.40 1 104 1.4E-20 T 13-10-2018 Atc_1021 9c97d0846eb004c30b7cedfe7b376255 217 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 11 202 9.0E-42 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Atc_1021 9c97d0846eb004c30b7cedfe7b376255 217 ProSitePatterns PS01331 Thymidylate kinase signature. 100 112 - T 13-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Atc_1021 9c97d0846eb004c30b7cedfe7b376255 217 Pfam PF02223 Thymidylate kinase 16 202 1.7E-40 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Atc_1021 9c97d0846eb004c30b7cedfe7b376255 217 Hamap MF_00165 Thymidylate kinase [tmk]. 12 211 27.062 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Atc_1021 9c97d0846eb004c30b7cedfe7b376255 217 Gene3D G3DSA:3.40.50.300 8 212 4.3E-55 T 13-10-2018 Atc_1021 9c97d0846eb004c30b7cedfe7b376255 217 SUPERFAMILY SSF52540 10 213 1.24E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m250 ce5402d0b8a3f9da3d0929ea806082dd 342 Pfam PF01548 Transposase 26 145 2.7E-10 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Atc_m250 ce5402d0b8a3f9da3d0929ea806082dd 342 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.8E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Atc_m178 ce5402d0b8a3f9da3d0929ea806082dd 342 Pfam PF01548 Transposase 26 145 2.7E-10 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Atc_m178 ce5402d0b8a3f9da3d0929ea806082dd 342 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.8E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Atc_1660 ce5402d0b8a3f9da3d0929ea806082dd 342 Pfam PF01548 Transposase 26 145 2.7E-10 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Atc_1660 ce5402d0b8a3f9da3d0929ea806082dd 342 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 2.8E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.4E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.4E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.4E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.4E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 6.4E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 Gene3D G3DSA:3.30.70.240 610 680 2.1E-90 T 13-10-2018 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 SMART SM00838 606 693 5.3E-54 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 113.52 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 SUPERFAMILY SSF52540 6 288 8.72E-108 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 SUPERFAMILY SSF54211 485 605 9.86E-46 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 SMART SM00889 486 604 2.8E-73 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 Gene3D G3DSA:3.30.70.870 412 489 4.0E-33 T 13-10-2018 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 Pfam PF00679 Elongation factor G C-terminus 606 692 1.8E-29 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 Pfam PF03144 Elongation factor Tu domain 2 330 397 2.5E-15 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 698 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.7E-34 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 Pfam PF14492 Elongation Factor G, domain II 410 483 1.6E-34 T 13-10-2018 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 Gene3D G3DSA:3.30.230.10 490 693 2.1E-90 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 SUPERFAMILY SSF50447 254 408 5.18E-36 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 SUPERFAMILY SSF54980 609 696 4.8E-29 T 13-10-2018 IPR035647 EF-G domain III/V-like Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.4E-66 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 Pfam PF03764 Elongation factor G, domain IV 485 604 3.6E-46 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 Gene3D G3DSA:3.40.50.300 1 300 1.6E-117 T 13-10-2018 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 Gene3D G3DSA:2.40.30.10 301 411 9.1E-44 T 13-10-2018 Atc_0602 966a3aec73ad84817a8871d2cbcc575e 699 SUPERFAMILY SSF54980 408 486 6.47E-26 T 13-10-2018 IPR035647 EF-G domain III/V-like Atc_0638 9bc61a27b6b13e9c07029fdaa6d1c1d9 447 Pfam PF01523 Putative modulator of DNA gyrase 33 324 1.7E-64 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Atc_0638 9bc61a27b6b13e9c07029fdaa6d1c1d9 447 SUPERFAMILY SSF111283 14 447 2.88E-132 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Atc_0638 9bc61a27b6b13e9c07029fdaa6d1c1d9 447 Gene3D G3DSA:3.30.2290.10 3 233 6.1E-91 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Atc_2766 26b63af2eb0b6c4a897d8565b1ef0a55 375 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 110 354 2.9E-57 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Atc_2766 26b63af2eb0b6c4a897d8565b1ef0a55 375 Gene3D G3DSA:3.40.50.2000 43 188 1.8E-44 T 13-10-2018 Atc_2766 26b63af2eb0b6c4a897d8565b1ef0a55 375 SUPERFAMILY SSF53756 44 370 4.24E-91 T 13-10-2018 Atc_2766 26b63af2eb0b6c4a897d8565b1ef0a55 375 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 44 368 3.7E-114 T 13-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 Atc_2766 26b63af2eb0b6c4a897d8565b1ef0a55 375 Gene3D G3DSA:3.40.50.2000 201 372 1.5E-50 T 13-10-2018 Atc_2169 805d0cac46e310cd83544688722d0fab 453 TIGRFAM TIGR01499 folC: bifunctional protein FolC 40 434 1.2E-84 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Atc_2169 805d0cac46e310cd83544688722d0fab 453 SUPERFAMILY SSF53623 34 290 2.49E-70 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_2169 805d0cac46e310cd83544688722d0fab 453 Gene3D G3DSA:3.40.1190.10 23 294 3.6E-72 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_2169 805d0cac46e310cd83544688722d0fab 453 PIRSF PIRSF001563 23 442 1.8E-86 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Atc_2169 805d0cac46e310cd83544688722d0fab 453 Gene3D G3DSA:3.90.190.20 302 439 1.4E-19 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_2169 805d0cac46e310cd83544688722d0fab 453 Pfam PF08245 Mur ligase middle domain 63 215 6.5E-9 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Atc_2169 805d0cac46e310cd83544688722d0fab 453 SUPERFAMILY SSF53244 300 436 3.85E-23 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_1925 0d54fd02d1b09f7e5854dda5afd7b022 148 Gene3D G3DSA:2.40.50.100 7 133 2.5E-30 T 13-10-2018 Atc_1925 0d54fd02d1b09f7e5854dda5afd7b022 148 SUPERFAMILY SSF51230 9 124 3.66E-26 T 13-10-2018 IPR011053 Single hybrid motif Atc_1925 0d54fd02d1b09f7e5854dda5afd7b022 148 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 54 83 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Atc_1925 0d54fd02d1b09f7e5854dda5afd7b022 148 Pfam PF01597 Glycine cleavage H-protein 14 133 6.3E-33 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 SMART SM00382 7 238 0.41 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 SMART SM00382 326 518 0.49 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 7 571 1.7E-279 T 13-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 Pfam PF02374 Anion-transporting ATPase 477 581 3.2E-6 T 13-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 Pfam PF02374 Anion-transporting ATPase 329 471 2.0E-31 T 13-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 Pfam PF02374 Anion-transporting ATPase 10 291 3.1E-83 T 13-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 Gene3D G3DSA:3.40.50.300 311 582 7.2E-71 T 13-10-2018 Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 SUPERFAMILY SSF52540 6 289 3.45E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 12 291 1.3E-89 T 13-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 SUPERFAMILY SSF52540 313 549 1.42E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 Gene3D G3DSA:3.40.50.300 1 294 1.2E-88 T 13-10-2018 Atc_3p05 4680f6dc843eab776ff5795ebee89443 600 PIRSF PIRSF001327 1 584 2.2E-265 T 13-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 Atc_m116 c7a925e0920a7064984049c725a84117 256 Pfam PF01464 Transglycosylase SLT domain 121 227 3.0E-8 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_m116 c7a925e0920a7064984049c725a84117 256 Gene3D G3DSA:1.10.530.10 117 255 4.9E-9 T 13-10-2018 Atc_m116 c7a925e0920a7064984049c725a84117 256 SUPERFAMILY SSF53955 116 240 1.19E-22 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_2303 a45f8f55bd84792d80042476cd255964 490 SUPERFAMILY SSF50156 241 365 1.1E-23 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Atc_2303 a45f8f55bd84792d80042476cd255964 490 Pfam PF13180 PDZ domain 294 373 3.5E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_2303 a45f8f55bd84792d80042476cd255964 490 Pfam PF13180 PDZ domain 420 478 2.1E-6 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_2303 a45f8f55bd84792d80042476cd255964 490 SMART SM00228 407 479 9.4E-5 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_2303 a45f8f55bd84792d80042476cd255964 490 SMART SM00228 283 365 4.6E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_2303 a45f8f55bd84792d80042476cd255964 490 Pfam PF13365 Trypsin-like peptidase domain 111 244 1.2E-33 T 13-10-2018 Atc_2303 a45f8f55bd84792d80042476cd255964 490 SUPERFAMILY SSF50494 43 274 7.41E-62 T 13-10-2018 IPR009003 Peptidase S1, PA clan Atc_2303 a45f8f55bd84792d80042476cd255964 490 Gene3D G3DSA:2.30.42.10 403 487 3.3E-15 T 13-10-2018 Atc_2303 a45f8f55bd84792d80042476cd255964 490 Gene3D G3DSA:2.30.42.10 283 385 1.9E-25 T 13-10-2018 Atc_2303 a45f8f55bd84792d80042476cd255964 490 Gene3D G3DSA:2.40.10.120 43 275 1.7E-77 T 13-10-2018 Atc_2303 a45f8f55bd84792d80042476cd255964 490 PRINTS PR00834 HtrA/DegQ protease family signature 120 132 1.5E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2303 a45f8f55bd84792d80042476cd255964 490 PRINTS PR00834 HtrA/DegQ protease family signature 181 205 1.5E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2303 a45f8f55bd84792d80042476cd255964 490 PRINTS PR00834 HtrA/DegQ protease family signature 323 335 1.5E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2303 a45f8f55bd84792d80042476cd255964 490 PRINTS PR00834 HtrA/DegQ protease family signature 237 254 1.5E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2303 a45f8f55bd84792d80042476cd255964 490 PRINTS PR00834 HtrA/DegQ protease family signature 215 232 1.5E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2303 a45f8f55bd84792d80042476cd255964 490 PRINTS PR00834 HtrA/DegQ protease family signature 141 161 1.5E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2303 a45f8f55bd84792d80042476cd255964 490 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 44 485 2.4E-143 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Atc_2303 a45f8f55bd84792d80042476cd255964 490 SUPERFAMILY SSF50156 420 488 5.52E-13 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 SUPERFAMILY SSF55781 182 334 1.42E-19 T 13-10-2018 Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 513 674 1.6E-39 T 13-10-2018 IPR000160 GGDEF domain Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 SUPERFAMILY SSF46458 28 128 4.41E-6 T 13-10-2018 IPR009050 Globin-like superfamily Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 Pfam PF00563 EAL domain 697 923 5.9E-48 T 13-10-2018 IPR001633 EAL domain Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 SUPERFAMILY SSF55781 356 506 1.83E-21 T 13-10-2018 Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 Pfam PF13185 GAF domain 179 323 7.0E-18 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 Pfam PF13185 GAF domain 352 495 4.6E-14 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 Gene3D G3DSA:3.30.70.270 512 680 5.8E-52 T 13-10-2018 Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 Gene3D G3DSA:3.20.20.450 694 939 1.3E-62 T 13-10-2018 IPR035919 EAL domain superfamily Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 SUPERFAMILY SSF141868 696 937 1.57E-56 T 13-10-2018 IPR035919 EAL domain superfamily Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 Gene3D G3DSA:1.10.490.10 25 150 4.4E-11 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 SUPERFAMILY SSF55073 520 676 4.47E-45 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 Gene3D G3DSA:3.30.450.40 159 337 8.0E-21 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 Gene3D G3DSA:3.30.450.40 338 509 1.5E-20 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 SMART SM00052 684 928 9.5E-41 T 13-10-2018 IPR001633 EAL domain Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 SMART SM00267 503 676 2.4E-57 T 13-10-2018 IPR000160 GGDEF domain Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 SMART SM00065 354 505 1.3E-5 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 SMART SM00065 179 333 0.0016 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_0254 c01e23c67b5f46ac6cf4a176b4024c77 1043 Pfam PF00990 Diguanylate cyclase, GGDEF domain 515 670 1.7E-41 T 13-10-2018 IPR000160 GGDEF domain Atc_0270 f108adccad07b72bea5de8a6c40c3076 310 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 121 293 3.5E-70 T 13-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Atc_0270 f108adccad07b72bea5de8a6c40c3076 310 SUPERFAMILY SSF52440 2 118 4.03E-36 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atc_0270 f108adccad07b72bea5de8a6c40c3076 310 Gene3D G3DSA:3.30.470.20 112 292 2.4E-104 T 13-10-2018 Atc_0270 f108adccad07b72bea5de8a6c40c3076 310 SUPERFAMILY SSF56059 120 307 2.65E-52 T 13-10-2018 Atc_0270 f108adccad07b72bea5de8a6c40c3076 310 Hamap MF_00162 Glutathione synthetase [gshB]. 1 310 144.024 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Atc_0270 f108adccad07b72bea5de8a6c40c3076 310 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 308 9.7E-119 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Atc_0270 f108adccad07b72bea5de8a6c40c3076 310 Gene3D G3DSA:3.30.1490.20 134 198 2.4E-104 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atc_0270 f108adccad07b72bea5de8a6c40c3076 310 Gene3D G3DSA:3.40.50.20 7 111 2.4E-104 T 13-10-2018 Atc_0270 f108adccad07b72bea5de8a6c40c3076 310 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 117 9.6E-36 T 13-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Atc_0778 bceda2ac322f0dc46c82bbe586e071e3 81 Gene3D G3DSA:3.40.50.720 1 81 1.6E-21 T 13-10-2018 Atc_0778 bceda2ac322f0dc46c82bbe586e071e3 81 SUPERFAMILY SSF52413 7 76 5.49E-16 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Atc_0778 bceda2ac322f0dc46c82bbe586e071e3 81 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 10 64 3.1E-12 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atc_0778 bceda2ac322f0dc46c82bbe586e071e3 81 SMART SM00984 1 65 7.3E-5 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atc_0791 a5d0b3d48faea1199b34ac80cbfc6f4e 196 SUPERFAMILY SSF48452 100 187 1.5E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0791 a5d0b3d48faea1199b34ac80cbfc6f4e 196 Gene3D G3DSA:1.25.40.10 78 193 1.3E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0055 bf7c2800172544822de086a7e84f673f 311 SUPERFAMILY SSF46565 2 103 7.07E-33 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Atc_0055 bf7c2800172544822de086a7e84f673f 311 SUPERFAMILY SSF49493 213 298 7.46E-22 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Atc_0055 bf7c2800172544822de086a7e84f673f 311 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 13-10-2018 IPR018253 DnaJ domain, conserved site Atc_0055 bf7c2800172544822de086a7e84f673f 311 Pfam PF00226 DnaJ domain 5 66 1.3E-25 T 13-10-2018 IPR001623 DnaJ domain Atc_0055 bf7c2800172544822de086a7e84f673f 311 Gene3D G3DSA:2.60.260.20 125 206 5.1E-20 T 13-10-2018 Atc_0055 bf7c2800172544822de086a7e84f673f 311 SMART SM00271 4 61 4.3E-28 T 13-10-2018 IPR001623 DnaJ domain Atc_0055 bf7c2800172544822de086a7e84f673f 311 Pfam PF01556 DnaJ C terminal domain 131 287 6.2E-38 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal Atc_0055 bf7c2800172544822de086a7e84f673f 311 SUPERFAMILY SSF49493 123 217 4.71E-17 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Atc_0055 bf7c2800172544822de086a7e84f673f 311 Gene3D G3DSA:2.60.260.20 208 309 4.0E-30 T 13-10-2018 Atc_0055 bf7c2800172544822de086a7e84f673f 311 Gene3D G3DSA:1.10.287.110 2 124 3.3E-35 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Atc_0055 bf7c2800172544822de086a7e84f673f 311 PRINTS PR00625 DnaJ domain signature 7 25 5.8E-24 T 13-10-2018 IPR001623 DnaJ domain Atc_0055 bf7c2800172544822de086a7e84f673f 311 PRINTS PR00625 DnaJ domain signature 61 80 5.8E-24 T 13-10-2018 IPR001623 DnaJ domain Atc_0055 bf7c2800172544822de086a7e84f673f 311 PRINTS PR00625 DnaJ domain signature 25 40 5.8E-24 T 13-10-2018 IPR001623 DnaJ domain Atc_0055 bf7c2800172544822de086a7e84f673f 311 PRINTS PR00625 DnaJ domain signature 41 61 5.8E-24 T 13-10-2018 IPR001623 DnaJ domain Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 SUPERFAMILY SSF55008 102 168 1.57E-19 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 Gene3D G3DSA:3.40.50.1000 514 781 3.7E-93 T 13-10-2018 IPR023214 HAD superfamily Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 Pfam PF00702 haloacid dehalogenase-like hydrolase 529 743 2.3E-47 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 SUPERFAMILY SSF81653 340 433 5.62E-26 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 Gene3D G3DSA:3.40.1110.10 544 661 3.7E-93 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 SUPERFAMILY SSF55008 35 97 3.14E-20 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 SUPERFAMILY SSF56784 532 835 5.01E-54 T 13-10-2018 IPR036412 HAD-like superfamily Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 Gene3D G3DSA:2.70.150.20 326 438 2.4E-38 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 Pfam PF00403 Heavy-metal-associated domain 107 164 1.8E-12 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 Pfam PF00403 Heavy-metal-associated domain 39 96 4.0E-17 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00942 Copper-transporting ATPase 1 signature 89 109 4.8E-8 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00942 Copper-transporting ATPase 1 signature 248 273 4.8E-8 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00942 Copper-transporting ATPase 1 signature 60 83 4.8E-8 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00942 Copper-transporting ATPase 1 signature 34 59 4.8E-8 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 Gene3D G3DSA:3.30.70.100 99 167 5.1E-21 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 Gene3D G3DSA:3.30.70.100 33 98 6.8E-22 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 383 397 4.0E-26 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 665 4.0E-26 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 676 686 4.0E-26 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 729 748 4.0E-26 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 533 547 4.0E-26 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 752 764 4.0E-26 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 247 838 9.5E-176 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 265 837 3.8E-185 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00943 Copper-transporting ATPase signature 250 269 2.2E-15 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00943 Copper-transporting ATPase signature 516 531 2.2E-15 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00943 Copper-transporting ATPase signature 802 816 2.2E-15 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00943 Copper-transporting ATPase signature 302 321 2.2E-15 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00943 Copper-transporting ATPase signature 456 470 2.2E-15 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00943 Copper-transporting ATPase signature 706 723 2.2E-15 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 PRINTS PR00943 Copper-transporting ATPase signature 117 131 2.2E-15 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 535 541 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 ProSitePatterns PS01047 Heavy-metal-associated domain. 107 136 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 Pfam PF00122 E1-E2 ATPase 333 512 1.3E-51 T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 ProSitePatterns PS01047 Heavy-metal-associated domain. 39 68 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 ProSitePatterns PS01229 Hypothetical cof family signature 2. 729 751 - T 13-10-2018 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 36 96 6.1E-13 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 103 166 1.9E-9 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 SUPERFAMILY SSF81665 298 802 4.97E-15 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Atc_m086 02dd79aced7580f4bac3b9e31dcd4e99 862 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 305 808 1.4E-92 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_0693 dfe0ea48f4402e8af239b44cac119f4d 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 356 6.9E-95 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Atc_0693 dfe0ea48f4402e8af239b44cac119f4d 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 261 281 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Atc_0693 dfe0ea48f4402e8af239b44cac119f4d 383 Gene3D G3DSA:3.40.50.1970 1 181 3.3E-50 T 13-10-2018 Atc_0693 dfe0ea48f4402e8af239b44cac119f4d 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 170 198 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Atc_0693 dfe0ea48f4402e8af239b44cac119f4d 383 SUPERFAMILY SSF56796 1 364 4.19E-114 T 13-10-2018 Atc_0693 dfe0ea48f4402e8af239b44cac119f4d 383 Gene3D G3DSA:1.20.1090.10 182 382 1.3E-50 T 13-10-2018 Atc_2477 437f94d8fce69056c9845cb5433f10fd 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 29 191 2.9E-43 T 13-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Atc_2477 437f94d8fce69056c9845cb5433f10fd 203 SUPERFAMILY SSF89392 18 201 8.63E-47 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Atc_2477 437f94d8fce69056c9845cb5433f10fd 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 7 199 2.1E-24 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Atc_2477 437f94d8fce69056c9845cb5433f10fd 203 Gene3D G3DSA:2.50.20.10 15 201 3.5E-53 T 13-10-2018 Atc_2477 437f94d8fce69056c9845cb5433f10fd 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 3 202 29.347 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 Gene3D G3DSA:3.90.1440.10 229 356 1.3E-184 T 13-10-2018 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 SUPERFAMILY SSF81767 227 356 1.24E-46 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 SUPERFAMILY SSF52540 5 403 1.16E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 Gene3D G3DSA:3.40.50.300 405 615 6.1E-90 T 13-10-2018 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 SUPERFAMILY SSF81886 615 900 6.41E-80 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 PRINTS PR00906 SecA protein signature 101 115 1.0E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 PRINTS PR00906 SecA protein signature 401 414 1.0E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 PRINTS PR00906 SecA protein signature 170 190 1.0E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 PRINTS PR00906 SecA protein signature 364 381 1.0E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 PRINTS PR00906 SecA protein signature 327 349 1.0E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 PRINTS PR00906 SecA protein signature 117 127 1.0E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 PRINTS PR00906 SecA protein signature 63 87 1.0E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 813 0.0 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 Pfam PF02810 SEC-C motif 892 910 1.2E-9 T 13-10-2018 IPR004027 SEC-C motif Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 Gene3D G3DSA:3.40.50.300 23 403 1.3E-184 T 13-10-2018 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 827 20.403 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 SMART SM00957 6 390 4.3E-302 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 ProSitePatterns PS01312 SecA family signature. 488 503 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 Pfam PF07516 SecA Wing and Scaffold domain 612 824 1.8E-67 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 SUPERFAMILY SSF52540 404 613 4.97E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 Pfam PF07517 SecA DEAD-like domain 7 389 8.7E-136 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 Gene3D G3DSA:1.10.3060.10 616 828 2.2E-74 T 13-10-2018 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 Gene3D G3DSA:3.10.450.50 868 911 3.4E-9 T 13-10-2018 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 Pfam PF01043 SecA preprotein cross-linking domain 232 346 5.0E-41 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Atc_2645 67a2c8653cd5a1322f140f050c783a0c 912 SMART SM00958 228 346 1.4E-74 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 Gene3D G3DSA:1.10.10.60 398 438 2.5E-11 T 13-10-2018 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 Gene3D G3DSA:3.40.50.2300 3 124 1.0E-35 T 13-10-2018 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 440 1.2E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 420 1.2E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 155 168 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 SUPERFAMILY SSF52172 5 175 6.97E-44 T 13-10-2018 IPR011006 CheY-like superfamily Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 SMART SM00448 6 117 1.7E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 Pfam PF02954 Bacterial regulatory protein, Fis family 400 437 5.2E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 344 353 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 SMART SM00382 151 294 1.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 Gene3D G3DSA:1.10.8.60 304 379 2.3E-23 T 13-10-2018 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 SUPERFAMILY SSF46689 344 437 3.94E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 217 232 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 Pfam PF00072 Response regulator receiver domain 8 117 2.3E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 Gene3D G3DSA:3.40.50.300 125 302 1.7E-64 T 13-10-2018 Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 SUPERFAMILY SSF52540 134 372 9.58E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1482 8ca4567fb4f009cc53bd584ff5003c64 447 Pfam PF00158 Sigma-54 interaction domain 134 297 7.2E-69 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_2531 8f59235aacde9c7d7ec124bd7301d217 481 Pfam PF01523 Putative modulator of DNA gyrase 38 331 2.3E-69 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Atc_2531 8f59235aacde9c7d7ec124bd7301d217 481 SUPERFAMILY SSF111283 24 479 1.83E-132 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Atc_2531 8f59235aacde9c7d7ec124bd7301d217 481 PIRSF PIRSF004919 20 480 7.1E-136 T 13-10-2018 IPR025502 TldD Atc_2531 8f59235aacde9c7d7ec124bd7301d217 481 Gene3D G3DSA:3.30.2290.10 11 239 9.2E-18 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Atc_1357 fbc23cc7f64f89ac6d1586a8699968cc 367 SUPERFAMILY SSF52540 27 262 3.34E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1357 fbc23cc7f64f89ac6d1586a8699968cc 367 Gene3D G3DSA:3.40.50.300 24 267 6.0E-69 T 13-10-2018 Atc_1357 fbc23cc7f64f89ac6d1586a8699968cc 367 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_1357 fbc23cc7f64f89ac6d1586a8699968cc 367 Pfam PF00005 ABC transporter 42 184 6.3E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_1357 fbc23cc7f64f89ac6d1586a8699968cc 367 SMART SM00382 51 234 6.9E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1017 01d0c402ca0dce48d3764479af1f76fc 82 SMART SM00823 Phosphopantetheine attachment site 5 77 0.0035 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atc_1017 01d0c402ca0dce48d3764479af1f76fc 82 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site Atc_1017 01d0c402ca0dce48d3764479af1f76fc 82 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 7.0E-36 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Atc_1017 01d0c402ca0dce48d3764479af1f76fc 82 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.805 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Atc_1017 01d0c402ca0dce48d3764479af1f76fc 82 Gene3D G3DSA:1.10.1200.10 1 81 5.9E-31 T 13-10-2018 IPR036736 ACP-like superfamily Atc_1017 01d0c402ca0dce48d3764479af1f76fc 82 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 76 0.004 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Atc_1017 01d0c402ca0dce48d3764479af1f76fc 82 SUPERFAMILY SSF47336 1 80 2.62E-24 T 13-10-2018 IPR036736 ACP-like superfamily Atc_1017 01d0c402ca0dce48d3764479af1f76fc 82 Pfam PF00550 Phosphopantetheine attachment site 7 73 5.9E-16 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Pfam PF00575 S1 RNA binding domain 371 443 9.8E-19 T 13-10-2018 IPR003029 S1 domain GO:0003676 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Pfam PF00575 S1 RNA binding domain 28 94 2.0E-7 T 13-10-2018 IPR003029 S1 domain GO:0003676 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Pfam PF00575 S1 RNA binding domain 284 356 7.1E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Pfam PF00575 S1 RNA binding domain 199 269 1.3E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Pfam PF00575 S1 RNA binding domain 111 180 2.5E-10 T 13-10-2018 IPR003029 S1 domain GO:0003676 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Pfam PF00575 S1 RNA binding domain 459 523 1.8E-7 T 13-10-2018 IPR003029 S1 domain GO:0003676 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SUPERFAMILY SSF50249 458 527 3.29E-12 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SUPERFAMILY SSF50249 264 372 1.3E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1394 710a42049c52b9c19565dba54fe6508f 573 PRINTS PR00681 Ribosomal protein S1 signature 339 357 1.3E-88 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 PRINTS PR00681 Ribosomal protein S1 signature 117 133 1.3E-88 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 PRINTS PR00681 Ribosomal protein S1 signature 299 318 1.3E-88 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 PRINTS PR00681 Ribosomal protein S1 signature 135 152 1.3E-88 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 PRINTS PR00681 Ribosomal protein S1 signature 93 112 1.3E-88 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 PRINTS PR00681 Ribosomal protein S1 signature 30 48 1.3E-88 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 PRINTS PR00681 Ribosomal protein S1 signature 164 184 1.3E-88 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 PRINTS PR00681 Ribosomal protein S1 signature 221 242 1.3E-88 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 PRINTS PR00681 Ribosomal protein S1 signature 48 62 1.3E-88 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 13 522 1.6E-204 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Gene3D G3DSA:2.40.50.140 15 106 2.6E-19 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Gene3D G3DSA:2.40.50.140 455 530 2.1E-11 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 PIRSF PIRSF002111 2 533 3.8E-213 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SUPERFAMILY SSF50249 199 286 4.33E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SUPERFAMILY SSF50249 102 180 8.58E-13 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Gene3D G3DSA:2.40.50.140 196 277 7.8E-28 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Gene3D G3DSA:2.40.50.140 107 190 8.1E-8 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Gene3D G3DSA:2.40.50.140 278 366 1.9E-29 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 Gene3D G3DSA:2.40.50.140 367 454 5.6E-26 T 13-10-2018 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SMART SM00316 284 356 1.2E-26 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SMART SM00316 28 96 7.8E-8 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SMART SM00316 199 269 4.8E-28 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SMART SM00316 371 443 1.5E-24 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SMART SM00316 112 180 1.3E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SMART SM00316 458 523 4.1E-12 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SUPERFAMILY SSF50249 13 120 8.21E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1394 710a42049c52b9c19565dba54fe6508f 573 SUPERFAMILY SSF50249 351 449 8.95E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_2429 f0dfdf4be6889d0b919c481b0590e857 213 Gene3D G3DSA:3.90.1470.20 15 135 4.8E-38 T 13-10-2018 Atc_2429 f0dfdf4be6889d0b919c481b0590e857 213 SUPERFAMILY SSF56784 5 207 7.01E-29 T 13-10-2018 IPR036412 HAD-like superfamily Atc_2429 f0dfdf4be6889d0b919c481b0590e857 213 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 170 1.4E-13 T 13-10-2018 Atc_2429 f0dfdf4be6889d0b919c481b0590e857 213 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 171 2.3E-15 T 13-10-2018 Atc_2429 f0dfdf4be6889d0b919c481b0590e857 213 Gene3D G3DSA:3.40.50.1000 6 202 4.8E-38 T 13-10-2018 IPR023214 HAD superfamily Atc_2750 e36304841df58647811882e7262c3041 419 Pfam PF08666 SAF domain 69 129 9.1E-7 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Atc_2750 e36304841df58647811882e7262c3041 419 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 25 179 9.0E-26 T 13-10-2018 IPR017592 Pilus assembly, Flp-type CpaB Atc_2750 e36304841df58647811882e7262c3041 419 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 237 312 2.3E-9 T 13-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain Atc_2750 e36304841df58647811882e7262c3041 419 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 134 182 3.9E-8 T 13-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain Atc_2750 e36304841df58647811882e7262c3041 419 SMART SM00858 66 130 4.6E-8 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Atc_0375 49257b5c6a60f59bd60835ff0885ebed 315 SUPERFAMILY SSF75138 47 137 1.31E-8 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Atc_0375 49257b5c6a60f59bd60835ff0885ebed 315 SUPERFAMILY SSF53795 138 304 1.25E-32 T 13-10-2018 Atc_0375 49257b5c6a60f59bd60835ff0885ebed 315 Gene3D G3DSA:3.40.1390.20 44 136 5.6E-10 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Atc_0375 49257b5c6a60f59bd60835ff0885ebed 315 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 47 308 1.4E-90 T 13-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 Atc_0375 49257b5c6a60f59bd60835ff0885ebed 315 Pfam PF07475 HPr Serine kinase C-terminal domain 136 305 5.8E-59 T 13-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 Atc_0375 49257b5c6a60f59bd60835ff0885ebed 315 Pfam PF02603 HPr Serine kinase N terminus 47 133 6.4E-9 T 13-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 Atc_0375 49257b5c6a60f59bd60835ff0885ebed 315 Gene3D G3DSA:3.40.50.300 137 312 2.1E-61 T 13-10-2018 Atc_2327 f786a5f195a1b6c2b768c7e6aaf66d3f 253 SUPERFAMILY SSF52317 3 191 6.96E-14 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_2327 f786a5f195a1b6c2b768c7e6aaf66d3f 253 Gene3D G3DSA:3.40.50.880 1 227 1.9E-23 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_2436 f61a1ed0ea26690fb747d9061e3fa0e9 548 Gene3D G3DSA:3.60.110.10 1 258 1.3E-90 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_2436 f61a1ed0ea26690fb747d9061e3fa0e9 548 PIRSF PIRSF006630 1 539 2.1E-187 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Atc_2436 f61a1ed0ea26690fb747d9061e3fa0e9 548 Gene3D G3DSA:3.40.50.620 261 538 5.7E-110 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2436 f61a1ed0ea26690fb747d9061e3fa0e9 548 Pfam PF00795 Carbon-nitrogen hydrolase 2 245 5.8E-30 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atc_2436 f61a1ed0ea26690fb747d9061e3fa0e9 548 TIGRFAM TIGR00552 nadE: NAD+ synthetase 271 514 7.4E-57 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Atc_2436 f61a1ed0ea26690fb747d9061e3fa0e9 548 SUPERFAMILY SSF52402 254 520 1.12E-71 T 13-10-2018 Atc_2436 f61a1ed0ea26690fb747d9061e3fa0e9 548 Pfam PF02540 NAD synthase 266 511 5.9E-70 T 13-10-2018 IPR022310 NAD/GMP synthase Atc_2436 f61a1ed0ea26690fb747d9061e3fa0e9 548 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 1 537 29.027 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Atc_2436 f61a1ed0ea26690fb747d9061e3fa0e9 548 SUPERFAMILY SSF56317 1 240 2.49E-61 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 Gene3D G3DSA:2.70.150.20 300 411 1.4E-36 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 SUPERFAMILY SSF81653 315 407 9.55E-26 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 SUPERFAMILY SSF55008 80 148 5.63E-20 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 716 1.2E-46 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 SUPERFAMILY SSF56784 505 808 3.66E-53 T 13-10-2018 IPR036412 HAD-like superfamily Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 Pfam PF00403 Heavy-metal-associated domain 17 75 1.6E-14 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 Pfam PF00403 Heavy-metal-associated domain 83 143 5.2E-14 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 239 810 1.3E-179 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00942 Copper-transporting ATPase 1 signature 222 247 6.0E-8 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00942 Copper-transporting ATPase 1 signature 12 37 6.0E-8 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00942 Copper-transporting ATPase 1 signature 38 61 6.0E-8 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 SUPERFAMILY SSF55008 7 79 1.44E-20 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 SUPERFAMILY SSF81665 255 778 5.49E-13 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 Gene3D G3DSA:3.40.1110.10 518 634 2.1E-86 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 781 1.4E-88 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 3.4E-26 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 659 3.4E-26 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 627 638 3.4E-26 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 357 371 3.4E-26 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 702 721 3.4E-26 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 725 737 3.4E-26 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 ProSitePatterns PS01047 Heavy-metal-associated domain. 85 114 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 ProSitePatterns PS01047 Heavy-metal-associated domain. 17 46 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 ProSitePatterns PS01229 Hypothetical cof family signature 2. 702 724 - T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 82 144 2.5E-8 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 14 75 1.0E-10 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 Gene3D G3DSA:3.40.50.1000 488 754 2.1E-86 T 13-10-2018 IPR023214 HAD superfamily Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 Gene3D G3DSA:3.30.70.100 79 155 1.7E-21 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 Pfam PF00122 E1-E2 ATPase 309 486 1.4E-50 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 Gene3D G3DSA:3.30.70.100 7 78 2.1E-21 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 221 811 2.8E-172 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00943 Copper-transporting ATPase signature 679 696 8.1E-12 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00943 Copper-transporting ATPase signature 276 295 8.1E-12 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00943 Copper-transporting ATPase signature 95 109 8.1E-12 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00943 Copper-transporting ATPase signature 430 444 8.1E-12 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00943 Copper-transporting ATPase signature 775 789 8.1E-12 T 13-10-2018 Atc_2814 5e4b2d85da24bc918f61a40afbb6f984 835 PRINTS PR00943 Copper-transporting ATPase signature 224 243 8.1E-12 T 13-10-2018 Atc_1445 6cef733a6276b8565b99ac61e88eaff1 445 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 164 191 2.3E-19 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atc_1445 6cef733a6276b8565b99ac61e88eaff1 445 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 87 116 2.3E-19 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atc_1445 6cef733a6276b8565b99ac61e88eaff1 445 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 222 2.3E-19 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atc_1445 6cef733a6276b8565b99ac61e88eaff1 445 SUPERFAMILY SSF58104 75 318 1.44E-43 T 13-10-2018 Atc_1445 6cef733a6276b8565b99ac61e88eaff1 445 Gene3D G3DSA:1.10.287.950 52 325 1.1E-45 T 13-10-2018 Atc_1445 6cef733a6276b8565b99ac61e88eaff1 445 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 115 286 2.3E-28 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atc_1445 6cef733a6276b8565b99ac61e88eaff1 445 SMART SM00283 66 306 3.5E-19 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atc_2464 87e01764f47caf93a29f27361aeba893 887 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 2 885 17.603 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Atc_2464 87e01764f47caf93a29f27361aeba893 887 SUPERFAMILY SSF46955 3 50 1.5E-8 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Atc_2464 87e01764f47caf93a29f27361aeba893 887 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 46 9.1E-7 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Atc_2464 87e01764f47caf93a29f27361aeba893 887 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 310 360 1.2E-15 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Atc_2464 87e01764f47caf93a29f27361aeba893 887 Gene3D G3DSA:3.40.50.10050 681 788 1.3E-38 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Atc_2464 87e01764f47caf93a29f27361aeba893 887 SUPERFAMILY SSF52540 385 553 2.5E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2464 87e01764f47caf93a29f27361aeba893 887 SUPERFAMILY SSF50447 789 885 7.07E-33 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atc_2464 87e01764f47caf93a29f27361aeba893 887 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 98 1.3E-15 T 13-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial Atc_2464 87e01764f47caf93a29f27361aeba893 887 SUPERFAMILY SSF52156 665 794 1.09E-37 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Atc_2464 87e01764f47caf93a29f27361aeba893 887 Gene3D G3DSA:2.40.30.10 559 676 9.4E-38 T 13-10-2018 Atc_2464 87e01764f47caf93a29f27361aeba893 887 Gene3D G3DSA:3.30.56.50 1 50 7.2E-9 T 13-10-2018 Atc_2464 87e01764f47caf93a29f27361aeba893 887 SUPERFAMILY SSF50447 560 642 8.84E-24 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atc_2464 87e01764f47caf93a29f27361aeba893 887 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 305 886 8.2E-264 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Atc_2464 87e01764f47caf93a29f27361aeba893 887 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 390 546 3.3E-32 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atc_2464 87e01764f47caf93a29f27361aeba893 887 Pfam PF00009 Elongation factor Tu GTP binding domain 392 548 2.8E-34 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2464 87e01764f47caf93a29f27361aeba893 887 Pfam PF11987 Translation-initiation factor 2 673 777 3.9E-37 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Atc_2464 87e01764f47caf93a29f27361aeba893 887 Gene3D G3DSA:2.40.30.10 789 886 2.6E-34 T 13-10-2018 Atc_2464 87e01764f47caf93a29f27361aeba893 887 ProSitePatterns PS01176 Initiation factor 2 signature. 838 860 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Atc_2464 87e01764f47caf93a29f27361aeba893 887 Gene3D G3DSA:3.40.50.300 385 558 1.8E-70 T 13-10-2018 Atc_1592 359d3f79b88f13e45ed665902ed4c9a1 486 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 1 459 8.5E-100 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Atc_1592 359d3f79b88f13e45ed665902ed4c9a1 486 SUPERFAMILY SSF56954 1 460 2.22E-82 T 13-10-2018 Atc_1592 359d3f79b88f13e45ed665902ed4c9a1 486 Gene3D G3DSA:1.20.1600.10 45 459 8.4E-98 T 13-10-2018 Atc_1592 359d3f79b88f13e45ed665902ed4c9a1 486 Gene3D G3DSA:2.20.200.10 92 348 8.4E-98 T 13-10-2018 Atc_1592 359d3f79b88f13e45ed665902ed4c9a1 486 Pfam PF02321 Outer membrane efflux protein 277 457 1.7E-21 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1592 359d3f79b88f13e45ed665902ed4c9a1 486 Pfam PF02321 Outer membrane efflux protein 55 249 3.5E-18 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1056 9251d93a707c60c9073ba72489359c20 700 SUPERFAMILY SSF48208 289 694 4.97E-73 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Atc_1056 9251d93a707c60c9073ba72489359c20 700 Gene3D G3DSA:1.50.10.10 282 700 1.4E-156 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Atc_1056 9251d93a707c60c9073ba72489359c20 700 SUPERFAMILY SSF74650 9 279 2.83E-79 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atc_1056 9251d93a707c60c9073ba72489359c20 700 ProSitePatterns PS00820 Glucoamylase active site region signature. 431 441 - T 13-10-2018 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 Atc_1056 9251d93a707c60c9073ba72489359c20 700 Pfam PF00723 Glycosyl hydrolases family 15 377 684 3.1E-15 T 13-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Atc_1056 9251d93a707c60c9073ba72489359c20 700 Gene3D G3DSA:2.70.98.10 6 277 1.7E-88 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Atc_1056 9251d93a707c60c9073ba72489359c20 700 Pfam PF09137 Glucodextranase, domain N 13 276 1.2E-92 T 13-10-2018 IPR015220 Glucodextranase, N-terminal KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 Atc_0824 48275278c6843dab6fd2612852c5d1f2 263 PIRSF PIRSF004808 17 257 6.2E-73 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Atc_0824 48275278c6843dab6fd2612852c5d1f2 263 Pfam PF00588 SpoU rRNA Methylase family 21 170 2.2E-36 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Atc_0824 48275278c6843dab6fd2612852c5d1f2 263 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 20 251 8.1E-65 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Atc_0824 48275278c6843dab6fd2612852c5d1f2 263 Gene3D G3DSA:1.10.8.590 183 262 1.1E-23 T 13-10-2018 Atc_0824 48275278c6843dab6fd2612852c5d1f2 263 Gene3D G3DSA:3.40.1280.10 17 181 4.6E-61 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atc_0824 48275278c6843dab6fd2612852c5d1f2 263 SUPERFAMILY SSF75217 19 181 6.41E-40 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Atc_0549 9885205e074899570ce067f50693e28f 429 SUPERFAMILY SSF103473 18 420 7.59E-60 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_0549 9885205e074899570ce067f50693e28f 429 Gene3D G3DSA:1.20.1250.20 238 428 8.1E-27 T 13-10-2018 Atc_0549 9885205e074899570ce067f50693e28f 429 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 92 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atc_0549 9885205e074899570ce067f50693e28f 429 Gene3D G3DSA:1.20.1250.20 20 234 1.3E-23 T 13-10-2018 Atc_0549 9885205e074899570ce067f50693e28f 429 Pfam PF07690 Major Facilitator Superfamily 251 421 7.4E-19 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_0549 9885205e074899570ce067f50693e28f 429 Pfam PF07690 Major Facilitator Superfamily 31 233 1.3E-21 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_1904 9885205e074899570ce067f50693e28f 429 SUPERFAMILY SSF103473 18 420 7.59E-60 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_1904 9885205e074899570ce067f50693e28f 429 Gene3D G3DSA:1.20.1250.20 238 428 8.1E-27 T 13-10-2018 Atc_1904 9885205e074899570ce067f50693e28f 429 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 92 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atc_1904 9885205e074899570ce067f50693e28f 429 Gene3D G3DSA:1.20.1250.20 20 234 1.3E-23 T 13-10-2018 Atc_1904 9885205e074899570ce067f50693e28f 429 Pfam PF07690 Major Facilitator Superfamily 251 421 7.4E-19 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_1904 9885205e074899570ce067f50693e28f 429 Pfam PF07690 Major Facilitator Superfamily 31 233 1.3E-21 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 SMART SM00490 247 328 2.5E-25 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 Pfam PF09382 RQC domain 404 515 7.1E-32 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 Pfam PF00270 DEAD/DEAH box helicase 23 184 2.0E-20 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 Gene3D G3DSA:1.10.150.80 529 602 3.2E-23 T 13-10-2018 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 Gene3D G3DSA:3.40.50.300 2 203 1.1E-77 T 13-10-2018 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 SUPERFAMILY SSF52540 203 453 3.8E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 SUPERFAMILY SSF52540 11 193 1.63E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 9 598 1.2E-230 T 13-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 SMART SM00956 409 512 6.0E-42 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 Pfam PF00271 Helicase conserved C-terminal domain 223 327 1.4E-16 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 Gene3D G3DSA:1.10.10.10 338 521 3.1E-47 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 Pfam PF16124 RecQ zinc-binding 340 401 3.3E-20 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 SMART SM00341 526 606 1.6E-15 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 Gene3D G3DSA:3.40.50.300 204 337 1.7E-40 T 13-10-2018 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 Pfam PF00570 HRDC domain 529 595 7.5E-22 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 SUPERFAMILY SSF47819 526 598 7.85E-21 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 11 461 4.3E-155 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Atc_0733 616e3849ba10324ec07dd41a85f8be2d 611 SMART SM00487 17 211 4.8E-33 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_2541 c5ea80f7907fe970605eaa8ab1dcfc5a 417 SUPERFAMILY SSF56762 16 417 1.83E-140 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2541 c5ea80f7907fe970605eaa8ab1dcfc5a 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 6.9E-126 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2541 c5ea80f7907fe970605eaa8ab1dcfc5a 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 8.3E-186 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2541 c5ea80f7907fe970605eaa8ab1dcfc5a 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 13-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2541 c5ea80f7907fe970605eaa8ab1dcfc5a 417 Gene3D G3DSA:1.10.645.20 4 417 9.2E-179 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2541 c5ea80f7907fe970605eaa8ab1dcfc5a 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.593 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1203 0505638e746c37f5aa8ba0b5084d34e5 438 Gene3D G3DSA:2.40.128.260 222 404 3.1E-58 T 13-10-2018 Atc_1203 0505638e746c37f5aa8ba0b5084d34e5 438 Gene3D G3DSA:1.10.1200.160 354 385 3.1E-58 T 13-10-2018 Atc_1203 0505638e746c37f5aa8ba0b5084d34e5 438 Pfam PF03743 Bacterial conjugation TrbI-like protein 220 406 1.3E-60 T 13-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Atc_2540 b061bef4d143968f954cb7e9a125373f 202 SUPERFAMILY SSF143243 8 180 1.7E-56 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2540 b061bef4d143968f954cb7e9a125373f 202 Gene3D G3DSA:3.30.460.80 1 139 1.3E-45 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2540 b061bef4d143968f954cb7e9a125373f 202 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 32 157 5.7E-43 T 13-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2540 b061bef4d143968f954cb7e9a125373f 202 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 89 147 3.0E-19 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2540 b061bef4d143968f954cb7e9a125373f 202 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 159 2.9E-45 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2540 b061bef4d143968f954cb7e9a125373f 202 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 120 141 - T 13-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2540 b061bef4d143968f954cb7e9a125373f 202 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 12 167 34.811 T 13-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0032 b707bfeda7c078da14a2c34d33e2611a 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 35.376 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0032 b707bfeda7c078da14a2c34d33e2611a 288 Gene3D G3DSA:1.10.287.80 6 284 4.3E-107 T 13-10-2018 Atc_0032 b707bfeda7c078da14a2c34d33e2611a 288 Pfam PF00231 ATP synthase 4 287 1.7E-93 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0032 b707bfeda7c078da14a2c34d33e2611a 288 Gene3D G3DSA:3.40.1380.10 61 207 4.3E-107 T 13-10-2018 Atc_0032 b707bfeda7c078da14a2c34d33e2611a 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 4.8E-108 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0032 b707bfeda7c078da14a2c34d33e2611a 288 SUPERFAMILY SSF52943 2 288 3.79E-91 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0032 b707bfeda7c078da14a2c34d33e2611a 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.2E-33 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0032 b707bfeda7c078da14a2c34d33e2611a 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.2E-33 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0032 b707bfeda7c078da14a2c34d33e2611a 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 3.2E-33 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0032 b707bfeda7c078da14a2c34d33e2611a 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 3.2E-33 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0032 b707bfeda7c078da14a2c34d33e2611a 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 13-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_2613 83070234cf052d88eb359dd97997222c 236 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 34 212 1.2E-15 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_2613 83070234cf052d88eb359dd97997222c 236 SUPERFAMILY SSF56784 31 218 1.15E-31 T 13-10-2018 IPR036412 HAD-like superfamily Atc_2613 83070234cf052d88eb359dd97997222c 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 35 211 7.5E-10 T 13-10-2018 Atc_2613 83070234cf052d88eb359dd97997222c 236 Gene3D G3DSA:1.10.150.450 44 112 4.9E-42 T 13-10-2018 Atc_2613 83070234cf052d88eb359dd97997222c 236 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 33 210 1.2E-52 T 13-10-2018 IPR010237 Pyrimidine 5-nucleotidase Atc_2613 83070234cf052d88eb359dd97997222c 236 Gene3D G3DSA:3.40.50.1000 33 214 4.9E-42 T 13-10-2018 IPR023214 HAD superfamily Atc_0420 5f3524d399a9852440ad8dbc912b02d2 171 Gene3D G3DSA:3.30.160.150 22 167 2.3E-16 T 13-10-2018 Atc_0420 5f3524d399a9852440ad8dbc912b02d2 171 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 15.465 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Atc_0420 5f3524d399a9852440ad8dbc912b02d2 171 Pfam PF04390 Lipopolysaccharide-assembly 48 162 5.8E-7 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Atc_m074 1889481f66b73d544d87a1a3486bd92e 208 SUPERFAMILY SSF161111 17 201 1.7E-37 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atc_m074 1889481f66b73d544d87a1a3486bd92e 208 Gene3D G3DSA:1.20.1510.10 19 201 7.7E-15 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atc_m074 1889481f66b73d544d87a1a3486bd92e 208 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 20 201 2.8E-24 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Atc_m074 1889481f66b73d544d87a1a3486bd92e 208 Pfam PF01545 Cation efflux family 23 201 3.4E-19 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Atc_2225 21dbe197760b9a751f8e78e0c1b530cf 169 Pfam PF02036 SCP-2 sterol transfer family 80 151 2.0E-6 T 13-10-2018 IPR003033 SCP2 sterol-binding domain Atc_2225 21dbe197760b9a751f8e78e0c1b530cf 169 Gene3D G3DSA:3.30.1050.10 28 161 1.0E-12 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Atc_2225 21dbe197760b9a751f8e78e0c1b530cf 169 SUPERFAMILY SSF55718 25 162 5.3E-23 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Atc_2273 86494ce87db03e2f1c5cfe1d3b6c3c15 137 Pfam PF08238 Sel1 repeat 68 103 4.7E-8 T 13-10-2018 IPR006597 Sel1-like repeat Atc_2273 86494ce87db03e2f1c5cfe1d3b6c3c15 137 Pfam PF08238 Sel1 repeat 32 67 5.7E-8 T 13-10-2018 IPR006597 Sel1-like repeat Atc_2273 86494ce87db03e2f1c5cfe1d3b6c3c15 137 Gene3D G3DSA:1.25.40.10 18 135 1.5E-30 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2273 86494ce87db03e2f1c5cfe1d3b6c3c15 137 SUPERFAMILY SSF81901 21 111 7.06E-22 T 13-10-2018 Atc_2273 86494ce87db03e2f1c5cfe1d3b6c3c15 137 SMART SM00671 68 103 2.3E-8 T 13-10-2018 IPR006597 Sel1-like repeat Atc_2273 86494ce87db03e2f1c5cfe1d3b6c3c15 137 SMART SM00671 32 67 3.5E-9 T 13-10-2018 IPR006597 Sel1-like repeat Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 SMART SM00387 319 431 5.8E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 430 3.9E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 Pfam PF13188 PAS domain 102 149 3.5E-9 T 13-10-2018 IPR000014 PAS domain Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 9.7E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 9.7E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 9.7E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 9.7E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 SUPERFAMILY SSF55785 90 198 9.25E-14 T 13-10-2018 IPR035965 PAS domain superfamily Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 Gene3D G3DSA:3.30.450.20 89 202 6.5E-13 T 13-10-2018 Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 Gene3D G3DSA:3.30.565.10 282 433 2.6E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 427 4.6E-116 T 13-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 SUPERFAMILY SSF55874 262 430 5.76E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 SMART SM00388 206 273 1.4E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 207 272 2.0E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 SUPERFAMILY SSF47384 191 272 1.57E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 Gene3D G3DSA:1.10.287.130 203 273 1.7E-22 T 13-10-2018 Atc_0836 1aef126cf90c25d338c507fe49bb4630 451 SMART SM00091 100 166 1.9E-6 T 13-10-2018 IPR000014 PAS domain Atc_0915 267819aebe56e39bad16af1bd5400a1b 307 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 40 169 2.5E-57 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Atc_0915 267819aebe56e39bad16af1bd5400a1b 307 SUPERFAMILY SSF52540 12 282 1.16E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0915 267819aebe56e39bad16af1bd5400a1b 307 Gene3D G3DSA:3.40.50.300 3 201 2.4E-45 T 13-10-2018 Atc_0915 267819aebe56e39bad16af1bd5400a1b 307 PIRSF PIRSF002849 2 302 2.3E-109 T 13-10-2018 Atc_0915 267819aebe56e39bad16af1bd5400a1b 307 Gene3D G3DSA:1.10.8.300 202 301 6.1E-21 T 13-10-2018 Atc_0915 267819aebe56e39bad16af1bd5400a1b 307 SMART SM00382 37 178 4.4E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2689 7a0c0f116162d4a87e39d6c8b19bf39b 615 Gene3D G3DSA:3.40.710.10 240 606 2.1E-84 T 13-10-2018 Atc_2689 7a0c0f116162d4a87e39d6c8b19bf39b 615 SUPERFAMILY SSF56601 249 595 5.26E-86 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_2689 7a0c0f116162d4a87e39d6c8b19bf39b 615 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 585 1.4E-64 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atc_2689 7a0c0f116162d4a87e39d6c8b19bf39b 615 Gene3D G3DSA:3.30.1390.30 79 154 3.0E-32 T 13-10-2018 Atc_2689 7a0c0f116162d4a87e39d6c8b19bf39b 615 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 229 4.8E-32 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Atc_2689 7a0c0f116162d4a87e39d6c8b19bf39b 615 Gene3D G3DSA:3.90.1310.10 58 238 3.0E-32 T 13-10-2018 Atc_2689 7a0c0f116162d4a87e39d6c8b19bf39b 615 SUPERFAMILY SSF56519 51 243 2.22E-39 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Atc_2689 7a0c0f116162d4a87e39d6c8b19bf39b 615 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 13 595 2.7E-170 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_2833 926266c7157de4b0d89b9f620e365e0c 114 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 59 73 - T 13-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 Atc_2833 926266c7157de4b0d89b9f620e365e0c 114 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 14 106 4.8E-21 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Atc_2833 926266c7157de4b0d89b9f620e365e0c 114 SUPERFAMILY SSF54211 10 108 5.31E-23 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_2833 926266c7157de4b0d89b9f620e365e0c 114 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 21 104 2.0E-11 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Atc_2833 926266c7157de4b0d89b9f620e365e0c 114 Pfam PF00825 Ribonuclease P 10 112 4.8E-25 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Atc_2833 926266c7157de4b0d89b9f620e365e0c 114 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 10 111 15.356 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Atc_2833 926266c7157de4b0d89b9f620e365e0c 114 Gene3D G3DSA:3.30.230.10 9 114 7.9E-27 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atc_1605 a0b40af8ff171759898dce887170842a 108 Pfam PF02656 Domain of unknown function (DUF202) 23 82 1.3E-13 T 13-10-2018 IPR003807 Domain of unknown function DUF202 Atc_0589 cff094ad7c5d540c1669e9111de36661 216 SUPERFAMILY SSF103088 79 204 1.11E-31 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_0589 cff094ad7c5d540c1669e9111de36661 216 PRINTS PR01021 OMPA domain signature 151 167 1.2E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_0589 cff094ad7c5d540c1669e9111de36661 216 PRINTS PR01021 OMPA domain signature 106 128 1.2E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_0589 cff094ad7c5d540c1669e9111de36661 216 PRINTS PR01021 OMPA domain signature 136 151 1.2E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_0589 cff094ad7c5d540c1669e9111de36661 216 Gene3D G3DSA:3.30.1330.60 88 213 3.6E-33 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_0589 cff094ad7c5d540c1669e9111de36661 216 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 169 188 4.2E-6 T 13-10-2018 Atc_0589 cff094ad7c5d540c1669e9111de36661 216 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 189 209 4.2E-6 T 13-10-2018 Atc_0589 cff094ad7c5d540c1669e9111de36661 216 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 151 168 4.2E-6 T 13-10-2018 Atc_0589 cff094ad7c5d540c1669e9111de36661 216 Pfam PF00691 OmpA family 105 199 3.3E-19 T 13-10-2018 IPR006665 OmpA-like domain Atc_2575 c5571965a9d9ea9ebd60f86898bd5389 173 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 94 105 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atc_2575 c5571965a9d9ea9ebd60f86898bd5389 173 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atc_2575 c5571965a9d9ea9ebd60f86898bd5389 173 Gene3D G3DSA:3.30.70.3270 28 170 3.1E-40 T 13-10-2018 Atc_2575 c5571965a9d9ea9ebd60f86898bd5389 173 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 11 132 1.1E-43 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2575 c5571965a9d9ea9ebd60f86898bd5389 173 SUPERFAMILY SSF54862 28 145 6.28E-24 T 13-10-2018 Atc_2575 c5571965a9d9ea9ebd60f86898bd5389 173 Pfam PF12838 4Fe-4S dicluster domain 54 106 5.5E-11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atc_2575 c5571965a9d9ea9ebd60f86898bd5389 173 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 2 148 26.67 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1392 cfbc508a1d648a7c3b151977767929d8 432 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Atc_1392 cfbc508a1d648a7c3b151977767929d8 432 Gene3D G3DSA:3.65.10.10 21 228 1.1E-150 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Atc_1392 cfbc508a1d648a7c3b151977767929d8 432 Gene3D G3DSA:3.65.10.10 12 417 1.1E-150 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Atc_1392 cfbc508a1d648a7c3b151977767929d8 432 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Atc_1392 cfbc508a1d648a7c3b151977767929d8 432 PIRSF PIRSF000505 2 430 4.9E-111 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Atc_1392 cfbc508a1d648a7c3b151977767929d8 432 SUPERFAMILY SSF55205 4 424 3.4E-125 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Atc_1392 cfbc508a1d648a7c3b151977767929d8 432 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 9 426 32.12 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Atc_1392 cfbc508a1d648a7c3b151977767929d8 432 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 418 2.1E-117 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Atc_1392 cfbc508a1d648a7c3b151977767929d8 432 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 13 421 9.1E-120 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Atc_1704 d652ef89740bdd87b041a7b0e1f31c6b 288 Pfam PF01479 S4 domain 4 47 1.4E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_1704 d652ef89740bdd87b041a7b0e1f31c6b 288 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Atc_1704 d652ef89740bdd87b041a7b0e1f31c6b 288 SUPERFAMILY SSF55174 5 96 7.95E-16 T 13-10-2018 Atc_1704 d652ef89740bdd87b041a7b0e1f31c6b 288 Gene3D G3DSA:3.30.70.580 70 225 5.8E-47 T 13-10-2018 Atc_1704 d652ef89740bdd87b041a7b0e1f31c6b 288 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 231 2.5E-50 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Atc_1704 d652ef89740bdd87b041a7b0e1f31c6b 288 SUPERFAMILY SSF55120 67 236 1.42E-40 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_1704 d652ef89740bdd87b041a7b0e1f31c6b 288 SMART SM00363 3 66 3.6E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_1704 d652ef89740bdd87b041a7b0e1f31c6b 288 Pfam PF00849 RNA pseudouridylate synthase 68 200 7.5E-13 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_1704 d652ef89740bdd87b041a7b0e1f31c6b 288 Gene3D G3DSA:3.30.70.1560 129 219 5.8E-47 T 13-10-2018 Atc_1704 d652ef89740bdd87b041a7b0e1f31c6b 288 Gene3D G3DSA:3.10.290.10 2 57 8.3E-19 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atc_2461 a448031bcdef146bee7b017ebc9f76a2 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-27 T 13-10-2018 Atc_2461 a448031bcdef146bee7b017ebc9f76a2 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_2461 a448031bcdef146bee7b017ebc9f76a2 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 7.0E-39 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2461 a448031bcdef146bee7b017ebc9f76a2 89 SUPERFAMILY SSF47060 3 89 4.12E-36 T 13-10-2018 IPR009068 S15/NS1, RNA-binding Atc_2461 a448031bcdef146bee7b017ebc9f76a2 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.415 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2461 a448031bcdef146bee7b017ebc9f76a2 89 Pfam PF00312 Ribosomal protein S15 10 88 6.6E-38 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_2461 a448031bcdef146bee7b017ebc9f76a2 89 SMART SM01387 8 88 3.0E-52 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_2461 a448031bcdef146bee7b017ebc9f76a2 89 Gene3D G3DSA:1.10.287.10 1 89 3.5E-35 T 13-10-2018 Atc_1304 931368244d5a98a841450b9cf5eadbbe 199 SUPERFAMILY SSF111304 4 197 1.31E-65 T 13-10-2018 IPR023627 Recombination protein RecR Atc_1304 931368244d5a98a841450b9cf5eadbbe 199 Pfam PF13662 Toprim domain 82 170 1.7E-20 T 13-10-2018 IPR006171 TOPRIM domain Atc_1304 931368244d5a98a841450b9cf5eadbbe 199 Gene3D G3DSA:3.40.1360.10 77 197 6.2E-37 T 13-10-2018 Atc_1304 931368244d5a98a841450b9cf5eadbbe 199 TIGRFAM TIGR00615 recR: recombination protein RecR 5 195 5.4E-67 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Atc_1304 931368244d5a98a841450b9cf5eadbbe 199 Gene3D G3DSA:1.10.8.420 1 52 8.0E-13 T 13-10-2018 Atc_1304 931368244d5a98a841450b9cf5eadbbe 199 Pfam PF02132 RecR protein 42 77 6.3E-14 T 13-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Atc_1304 931368244d5a98a841450b9cf5eadbbe 199 SMART SM00493 80 165 1.7E-12 T 13-10-2018 IPR006171 TOPRIM domain Atc_1304 931368244d5a98a841450b9cf5eadbbe 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 13-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Atc_1304 931368244d5a98a841450b9cf5eadbbe 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 88.236 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Atc_0989 d79a5c1b9259869447d83a1e72c0ec19 475 Pfam PF00929 Exonuclease 11 161 1.6E-25 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atc_0989 d79a5c1b9259869447d83a1e72c0ec19 475 SMART SM00479 8 173 5.0E-32 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atc_0989 d79a5c1b9259869447d83a1e72c0ec19 475 SMART SM00465 203 284 1.3E-11 T 13-10-2018 IPR000305 GIY-YIG endonuclease Atc_0989 d79a5c1b9259869447d83a1e72c0ec19 475 SUPERFAMILY SSF53098 6 180 2.69E-42 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_0989 d79a5c1b9259869447d83a1e72c0ec19 475 Gene3D G3DSA:3.40.1440.10 192 287 7.0E-25 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Atc_0989 d79a5c1b9259869447d83a1e72c0ec19 475 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 163 6.6E-21 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_0989 d79a5c1b9259869447d83a1e72c0ec19 475 Gene3D G3DSA:3.30.420.10 3 173 5.9E-39 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_0989 d79a5c1b9259869447d83a1e72c0ec19 475 SUPERFAMILY SSF82771 203 283 5.89E-16 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Atc_0989 d79a5c1b9259869447d83a1e72c0ec19 475 Pfam PF01541 GIY-YIG catalytic domain 205 276 8.3E-7 T 13-10-2018 IPR000305 GIY-YIG endonuclease Atc_1861 07f228e63661c345d9c064504deffdbe 112 PIRSF PIRSF039144 1 112 7.0E-53 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_1861 07f228e63661c345d9c064504deffdbe 112 Gene3D G3DSA:3.30.70.120 1 112 2.1E-45 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Atc_1861 07f228e63661c345d9c064504deffdbe 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Atc_1861 07f228e63661c345d9c064504deffdbe 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Atc_1861 07f228e63661c345d9c064504deffdbe 112 SUPERFAMILY SSF54913 1 112 1.3E-44 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Atc_1861 07f228e63661c345d9c064504deffdbe 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.6E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_1861 07f228e63661c345d9c064504deffdbe 112 SMART SM00938 4 105 4.6E-64 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_1861 07f228e63661c345d9c064504deffdbe 112 PRINTS PR00340 P-II protein signature 23 41 5.0E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_1861 07f228e63661c345d9c064504deffdbe 112 PRINTS PR00340 P-II protein signature 2 17 5.0E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_1861 07f228e63661c345d9c064504deffdbe 112 PRINTS PR00340 P-II protein signature 52 75 5.0E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_1861 07f228e63661c345d9c064504deffdbe 112 PRINTS PR00340 P-II protein signature 83 103 5.0E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 PRINTS PR00395 Ribosomal protein S2 signature 177 188 1.5E-35 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.5E-35 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 PRINTS PR00395 Ribosomal protein S2 signature 198 212 1.5E-35 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 PRINTS PR00395 Ribosomal protein S2 signature 160 177 1.5E-35 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.5E-35 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.5E-35 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 227 42.32 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 SUPERFAMILY SSF52313 8 231 5.1E-95 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Atc_0841 66e855cdfcc33e38fe987361774e556b 251 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 228 1.0E-102 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 Gene3D G3DSA:3.40.50.10490 11 221 2.3E-92 T 13-10-2018 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 Pfam PF00318 Ribosomal protein S2 11 226 2.9E-95 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 160 184 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Atc_0841 66e855cdfcc33e38fe987361774e556b 251 Gene3D G3DSA:1.10.287.610 105 152 2.3E-92 T 13-10-2018 Atc_0817 072616a51c40c0ebbe2dcef7eea5d16a 336 Gene3D G3DSA:3.40.50.1010 2 167 1.5E-28 T 13-10-2018 Atc_0817 072616a51c40c0ebbe2dcef7eea5d16a 336 Pfam PF01936 NYN domain 9 164 9.7E-23 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type Atc_0817 072616a51c40c0ebbe2dcef7eea5d16a 336 Gene3D G3DSA:2.40.50.140 186 271 2.7E-5 T 13-10-2018 Atc_m067 74a7abc8d8ad23649a4151bd7fecd0ac 402 SUPERFAMILY SSF53383 39 402 3.5E-102 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_m067 74a7abc8d8ad23649a4151bd7fecd0ac 402 Gene3D G3DSA:3.90.1150.10 270 402 5.1E-51 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_m067 74a7abc8d8ad23649a4151bd7fecd0ac 402 PIRSF PIRSF001434 10 402 5.7E-131 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atc_m067 74a7abc8d8ad23649a4151bd7fecd0ac 402 Gene3D G3DSA:3.40.640.10 20 269 6.2E-77 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_m067 74a7abc8d8ad23649a4151bd7fecd0ac 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 23 402 3.7E-120 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atc_m067 74a7abc8d8ad23649a4151bd7fecd0ac 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 212 226 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 Gene3D G3DSA:1.20.1640.10 501 1001 6.6E-244 T 13-10-2018 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 Gene3D G3DSA:3.30.70.1440 656 852 6.6E-244 T 13-10-2018 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 SUPERFAMILY SSF82866 291 491 2.88E-34 T 13-10-2018 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 Gene3D G3DSA:3.30.2090.10 706 794 6.6E-244 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 SUPERFAMILY SSF82693 138 325 9.94E-19 T 13-10-2018 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 Gene3D G3DSA:3.30.70.1430 43 802 6.6E-244 T 13-10-2018 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 SUPERFAMILY SSF82866 789 1006 7.06E-36 T 13-10-2018 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 Gene3D G3DSA:3.30.2090.10 181 272 6.6E-244 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 Gene3D G3DSA:1.20.1640.10 18 500 6.6E-244 T 13-10-2018 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 SUPERFAMILY SSF82714 184 265 6.54E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 Gene3D G3DSA:3.30.70.1430 556 655 6.6E-244 T 13-10-2018 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 SUPERFAMILY SSF82693 43 127 2.14E-14 T 13-10-2018 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 SUPERFAMILY SSF82714 708 790 1.7E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 Pfam PF00873 AcrB/AcrD/AcrF family 16 1003 1.2E-206 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 Gene3D G3DSA:3.30.70.1320 134 325 6.6E-244 T 13-10-2018 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 3.6E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.6E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 3.6E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 3.6E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 PRINTS PR00702 Acriflavin resistance protein family signature 608 622 3.6E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 3.6E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.6E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 3.6E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.6E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0453 5f639fb3530d4d8e5f718d192c292058 1013 SUPERFAMILY SSF82693 553 643 4.97E-14 T 13-10-2018 Atc_0811 2dd8eb62fc3c070000609aeb5a382575 108 SUPERFAMILY SSF52833 3 108 1.95E-41 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0811 2dd8eb62fc3c070000609aeb5a382575 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Atc_0811 2dd8eb62fc3c070000609aeb5a382575 108 Gene3D G3DSA:3.40.30.10 1 107 1.3E-37 T 13-10-2018 Atc_0811 2dd8eb62fc3c070000609aeb5a382575 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 13-10-2018 Atc_0811 2dd8eb62fc3c070000609aeb5a382575 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 13-10-2018 Atc_0811 2dd8eb62fc3c070000609aeb5a382575 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 13-10-2018 Atc_0811 2dd8eb62fc3c070000609aeb5a382575 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 106 7.5E-40 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Atc_0811 2dd8eb62fc3c070000609aeb5a382575 108 PIRSF PIRSF000077 2 108 4.1E-45 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Atc_0811 2dd8eb62fc3c070000609aeb5a382575 108 Pfam PF00085 Thioredoxin 6 106 2.3E-35 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Atc_2305 a88394dd8faf75813789af13179805dd 210 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 198 4.0E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atc_2305 a88394dd8faf75813789af13179805dd 210 SUPERFAMILY SSF88659 137 199 5.98E-18 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_2305 a88394dd8faf75813789af13179805dd 210 Pfam PF04542 Sigma-70 region 2 38 105 4.2E-20 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atc_2305 a88394dd8faf75813789af13179805dd 210 SUPERFAMILY SSF88946 17 121 1.57E-31 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atc_2305 a88394dd8faf75813789af13179805dd 210 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 60 91 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_2305 a88394dd8faf75813789af13179805dd 210 Gene3D G3DSA:1.10.10.10 135 204 4.2E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2305 a88394dd8faf75813789af13179805dd 210 Pfam PF08281 Sigma-70, region 4 145 194 1.3E-18 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_2305 a88394dd8faf75813789af13179805dd 210 Gene3D G3DSA:1.10.1740.10 13 134 7.6E-41 T 13-10-2018 Atc_2305 a88394dd8faf75813789af13179805dd 210 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 17 203 4.7E-103 T 13-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_2805 14aac52b62e74cd895dbd7d87737f94b 283 Pfam PF13432 Tetratricopeptide repeat 167 220 7.3E-9 T 13-10-2018 Atc_2805 14aac52b62e74cd895dbd7d87737f94b 283 SUPERFAMILY SSF48452 157 279 1.22E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2805 14aac52b62e74cd895dbd7d87737f94b 283 Gene3D G3DSA:1.25.40.10 161 282 3.4E-30 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2805 14aac52b62e74cd895dbd7d87737f94b 283 Pfam PF14559 Tetratricopeptide repeat 235 278 2.4E-7 T 13-10-2018 Atc_2805 14aac52b62e74cd895dbd7d87737f94b 283 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 162 278 5.9E-37 T 13-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal Atc_2805 14aac52b62e74cd895dbd7d87737f94b 283 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 11 281 17.78 T 13-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 Gene3D G3DSA:2.40.33.10 71 167 7.1E-159 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 Pfam PF00224 Pyruvate kinase, barrel domain 2 338 6.7E-117 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.3E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 PRINTS PR01050 Pyruvate kinase family signature 292 310 1.3E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 PRINTS PR01050 Pyruvate kinase family signature 242 266 1.3E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 PRINTS PR01050 Pyruvate kinase family signature 215 241 1.3E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.3E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 PRINTS PR01050 Pyruvate kinase family signature 267 291 1.3E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 PRINTS PR01050 Pyruvate kinase family signature 311 327 1.3E-55 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 Gene3D G3DSA:3.40.1380.20 334 468 7.1E-159 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 SUPERFAMILY SSF50800 71 162 3.66E-24 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 Gene3D G3DSA:3.20.20.60 3 333 7.1E-159 T 13-10-2018 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 SUPERFAMILY SSF52935 321 472 6.93E-38 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 472 1.4E-152 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 SUPERFAMILY SSF51621 2 337 1.4E-90 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atc_0074 34f9ac05256d77996b5e655640a8eaed 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 470 6.3E-29 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0826 594bdfef43eb0798e27b3c23a96d4d70 161 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 13-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Atc_0826 594bdfef43eb0798e27b3c23a96d4d70 161 Gene3D G3DSA:1.10.10.10 1 145 1.6E-49 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0826 594bdfef43eb0798e27b3c23a96d4d70 161 Pfam PF02082 Transcriptional regulator 1 83 1.2E-28 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Atc_0826 594bdfef43eb0798e27b3c23a96d4d70 161 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 1.1E-44 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Atc_0826 594bdfef43eb0798e27b3c23a96d4d70 161 SUPERFAMILY SSF46785 2 136 3.03E-36 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0918 21672d19dc5b6bd86bc01b50797a5798 562 Gene3D G3DSA:1.20.1560.10 6 329 3.3E-79 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atc_0918 21672d19dc5b6bd86bc01b50797a5798 562 SUPERFAMILY SSF90123 15 332 1.57E-73 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atc_0918 21672d19dc5b6bd86bc01b50797a5798 562 SMART SM00382 368 553 7.0E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0918 21672d19dc5b6bd86bc01b50797a5798 562 Gene3D G3DSA:3.40.50.300 341 562 5.7E-70 T 13-10-2018 Atc_0918 21672d19dc5b6bd86bc01b50797a5798 562 Pfam PF00005 ABC transporter 359 507 8.5E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0918 21672d19dc5b6bd86bc01b50797a5798 562 Pfam PF00664 ABC transporter transmembrane region 31 295 6.3E-38 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atc_0918 21672d19dc5b6bd86bc01b50797a5798 562 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0918 21672d19dc5b6bd86bc01b50797a5798 562 SUPERFAMILY SSF52540 354 557 8.54E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 1 124 9.3E-48 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 225 239 1.8E-36 T 13-10-2018 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 186 200 1.8E-36 T 13-10-2018 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 298 309 1.8E-36 T 13-10-2018 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 273 290 1.8E-36 T 13-10-2018 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 256 272 1.8E-36 T 13-10-2018 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 341 354 9.7E-10 T 13-10-2018 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 256 267 9.7E-10 T 13-10-2018 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 228 237 9.7E-10 T 13-10-2018 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 SUPERFAMILY SSF52021 1 134 2.75E-53 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 Gene3D G3DSA:3.50.30.20 1 144 2.1E-54 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 Gene3D G3DSA:3.40.50.880 145 368 8.7E-63 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 1 365 3.4E-134 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 370 44.476 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 SUPERFAMILY SSF52317 178 367 7.98E-55 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 SMART SM01097 1 126 5.1E-79 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0658 5eeb5f077e977fb8248ad6deb2e0a3e5 376 Pfam PF00117 Glutamine amidotransferase class-I 188 363 3.4E-38 T 13-10-2018 IPR017926 Glutamine amidotransferase Atc_2295 7d06e22c5b6248acfc9ce36bbf8d9ebb 137 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 3.3E-25 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Atc_2295 7d06e22c5b6248acfc9ce36bbf8d9ebb 137 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 97 2.8E-14 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Atc_2295 7d06e22c5b6248acfc9ce36bbf8d9ebb 137 Gene3D G3DSA:3.90.470.20 1 127 4.2E-30 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Atc_2295 7d06e22c5b6248acfc9ce36bbf8d9ebb 137 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 125 1.2E-20 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Atc_2295 7d06e22c5b6248acfc9ce36bbf8d9ebb 137 SUPERFAMILY SSF56214 2 125 7.85E-24 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Atc_2295 7d06e22c5b6248acfc9ce36bbf8d9ebb 137 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 126 22.346 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Atc_2295 7d06e22c5b6248acfc9ce36bbf8d9ebb 137 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 125 2.0E-15 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Atc_0771 9ef05226dbc91dc9b548e19bc1596bb0 195 Pfam PF05598 Transposase domain (DUF772) 24 99 8.0E-19 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0771 9ef05226dbc91dc9b548e19bc1596bb0 195 Pfam PF01609 Transposase DDE domain 116 195 2.2E-9 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0100 e94047644d9987963123d5c3c68bddca 259 SUPERFAMILY SSF52540 1 245 5.32E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0100 e94047644d9987963123d5c3c68bddca 259 Gene3D G3DSA:3.40.50.300 1 249 2.2E-44 T 13-10-2018 Atc_0100 e94047644d9987963123d5c3c68bddca 259 Pfam PF13614 AAA domain 1 169 4.5E-24 T 13-10-2018 IPR025669 AAA domain Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 SUPERFAMILY SSF52540 550 858 4.28E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 763 1.3E-55 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 SMART SM00382 198 343 4.8E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 SMART SM00382 601 752 5.8E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 2.8E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 2.8E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 2.8E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 2.8E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 770 850 5.0E-26 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 SUPERFAMILY SSF81923 4 141 1.28E-45 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 143 2.5E-16 T 13-10-2018 IPR004176 Clp, N-terminal Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.3E-16 T 13-10-2018 IPR004176 Clp, N-terminal Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 Gene3D G3DSA:3.40.50.300 343 548 4.5E-71 T 13-10-2018 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 859 0.0 T 13-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 SUPERFAMILY SSF52540 159 549 3.97E-99 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 1.1E-12 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 SMART SM01086 770 859 1.5E-38 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 Gene3D G3DSA:1.10.1780.10 1 147 1.5E-39 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 Gene3D G3DSA:1.10.8.60 770 862 1.4E-28 T 13-10-2018 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 Gene3D G3DSA:3.40.50.300 148 342 7.2E-74 T 13-10-2018 Atc_2152 a465eb5cf8a8e9badadd8a1d37ad2f41 865 Gene3D G3DSA:3.40.50.300 554 768 1.9E-88 T 13-10-2018 Atc_1495 e3588115752153a2f5db49a599e06b21 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 3.0E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Atc_1495 e3588115752153a2f5db49a599e06b21 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 3.0E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Atc_1495 e3588115752153a2f5db49a599e06b21 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 3.0E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Atc_1495 e3588115752153a2f5db49a599e06b21 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 3.0E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Atc_1495 e3588115752153a2f5db49a599e06b21 262 Pfam PF01311 Bacterial export proteins, family 1 14 247 4.6E-66 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Atc_1495 e3588115752153a2f5db49a599e06b21 262 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 253 7.5E-66 T 13-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 Atc_0381 5d0eb5b2cb0fcb5f1f70554b20b565b0 204 ProSitePatterns PS01155 Endonuclease III family signature. 90 119 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Atc_0381 5d0eb5b2cb0fcb5f1f70554b20b565b0 204 PIRSF PIRSF001435 3 198 4.2E-48 T 13-10-2018 Atc_0381 5d0eb5b2cb0fcb5f1f70554b20b565b0 204 SUPERFAMILY SSF48150 4 195 8.64E-68 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Atc_0381 5d0eb5b2cb0fcb5f1f70554b20b565b0 204 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 22 156 8.1E-18 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atc_0381 5d0eb5b2cb0fcb5f1f70554b20b565b0 204 SMART SM00478 26 173 3.4E-50 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atc_0381 5d0eb5b2cb0fcb5f1f70554b20b565b0 204 TIGRFAM TIGR01083 nth: endonuclease III 1 182 5.0E-75 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Atc_0381 5d0eb5b2cb0fcb5f1f70554b20b565b0 204 Gene3D G3DSA:1.10.1670.10 2 191 4.8E-72 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Atc_0381 5d0eb5b2cb0fcb5f1f70554b20b565b0 204 Gene3D G3DSA:1.10.340.30 9 120 4.8E-72 T 13-10-2018 Atc_0381 5d0eb5b2cb0fcb5f1f70554b20b565b0 204 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 175 191 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Atc_0381 5d0eb5b2cb0fcb5f1f70554b20b565b0 204 Hamap MF_00942 Endonuclease III [nth]. 1 197 35.063 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Atc_0381 5d0eb5b2cb0fcb5f1f70554b20b565b0 204 Pfam PF00633 Helix-hairpin-helix motif 87 115 1.8E-9 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Atc_0635 9e93b3f6e2d94d9295be1c31df825a22 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 148 8.1E-48 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Atc_0635 9e93b3f6e2d94d9295be1c31df825a22 148 Pfam PF00436 Single-strand binding protein family 1 103 1.1E-38 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Atc_0635 9e93b3f6e2d94d9295be1c31df825a22 148 Gene3D G3DSA:2.40.50.140 1 121 5.3E-45 T 13-10-2018 Atc_0635 9e93b3f6e2d94d9295be1c31df825a22 148 Hamap MF_00984 Single-stranded DNA-binding protein. 1 108 35.755 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Atc_0635 9e93b3f6e2d94d9295be1c31df825a22 148 SUPERFAMILY SSF50249 1 148 1.41E-53 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0683 21afe1ed00ee1fa0e1809afa183318d4 134 Pfam PF03843 Outer membrane lipoprotein Slp family 2 125 1.1E-34 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Atc_1479 9961e2d3d22ddf14c9acbf7d8a956d61 177 Pfam PF16823 Atypical PilZ domain, cyclic di-GMP receptor 54 174 2.8E-9 T 13-10-2018 IPR031800 Cyclic di-GMP receptor, atypical PilZ domain Atc_2812 a0a3c7dad000603ad782f1031c76e436 444 ProSitePatterns PS00217 Sugar transport proteins signature 2. 104 129 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atc_2812 a0a3c7dad000603ad782f1031c76e436 444 Pfam PF00083 Sugar (and other) transporter 14 434 3.5E-57 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atc_2812 a0a3c7dad000603ad782f1031c76e436 444 SUPERFAMILY SSF103473 2 434 2.49E-68 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_2812 a0a3c7dad000603ad782f1031c76e436 444 Gene3D G3DSA:1.20.1250.20 4 435 1.1E-80 T 13-10-2018 Atc_0618 45024cf530cbcae37920eb094156f526 61 Pfam PF00253 Ribosomal protein S14p/S29e 10 60 2.9E-22 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0618 45024cf530cbcae37920eb094156f526 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 13-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0618 45024cf530cbcae37920eb094156f526 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 24.68 T 13-10-2018 IPR023053 Ribosomal protein S14, type Z Atc_0618 45024cf530cbcae37920eb094156f526 61 SUPERFAMILY SSF57716 4 61 6.63E-20 T 13-10-2018 Atc_0618 45024cf530cbcae37920eb094156f526 61 Gene3D G3DSA:4.10.830.10 1 61 1.0E-28 T 13-10-2018 Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 Gene3D G3DSA:3.40.50.300 414 595 1.1E-49 T 13-10-2018 Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 Gene3D G3DSA:4.10.860.10 610 666 1.8E-14 T 13-10-2018 Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 SMART SM00490 459 545 3.2E-19 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 663 43.153 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 Pfam PF04851 Type III restriction enzyme, res subunit 17 92 1.7E-6 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 Gene3D G3DSA:3.40.50.300 272 413 4.5E-53 T 13-10-2018 Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 SUPERFAMILY SSF52540 4 414 9.08E-135 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 6 660 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 Pfam PF00271 Helicase conserved C-terminal domain 443 543 9.3E-17 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 Gene3D G3DSA:3.40.50.300 1 235 1.6E-70 T 13-10-2018 Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 SMART SM00487 9 425 8.3E-26 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 SUPERFAMILY SSF46600 626 663 1.44E-10 T 13-10-2018 IPR036876 UVR domain superfamily Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 Pfam PF12344 Ultra-violet resistance protein B 551 592 2.1E-21 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 SUPERFAMILY SSF52540 37 581 8.83E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1830 61284a30de3c679a9f8e8a89fe1ea6f9 676 Pfam PF02151 UvrB/uvrC motif 629 661 8.1E-9 T 13-10-2018 IPR001943 UVR domain GO:0005515 Atc_0898 5fbfaaa3879abe2375981c2897797835 339 SUPERFAMILY SSF54373 173 275 5.56E-21 T 13-10-2018 Atc_0898 5fbfaaa3879abe2375981c2897797835 339 Pfam PF01593 Flavin containing amine oxidoreductase 82 330 1.5E-21 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Atc_0898 5fbfaaa3879abe2375981c2897797835 339 SUPERFAMILY SSF51905 2 331 1.19E-22 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0898 5fbfaaa3879abe2375981c2897797835 339 Gene3D G3DSA:3.50.50.60 1 73 2.5E-5 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0898 5fbfaaa3879abe2375981c2897797835 339 Gene3D G3DSA:3.50.50.60 74 336 1.7E-44 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0897 82014dbfd1e351da79063457e67e8744 144 Pfam PF03203 MerC mercury resistance protein 10 124 7.8E-18 T 13-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 Atc_0897 82014dbfd1e351da79063457e67e8744 144 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 43 140 1.0E-20 T 13-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 SUPERFAMILY SSF56719 402 644 3.92E-87 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 SUPERFAMILY SSF54211 229 399 6.64E-54 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 Gene3D G3DSA:3.40.50.670 406 651 4.8E-103 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 SUPERFAMILY SSF55874 6 223 5.34E-70 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 Pfam PF01751 Toprim domain 427 539 6.1E-18 T 13-10-2018 IPR006171 TOPRIM domain Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 SMART SM00433 42 645 0.0 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 Gene3D G3DSA:3.30.565.10 3 228 6.5E-88 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 Pfam PF00204 DNA gyrase B 229 398 9.8E-54 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 ProSitePatterns PS00177 DNA topoisomerase II signature. 430 438 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR01159 DNA gyrase subunit B signature 368 382 2.8E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR01159 DNA gyrase subunit B signature 605 617 2.8E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR01159 DNA gyrase subunit B signature 6 16 2.8E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR01159 DNA gyrase subunit B signature 621 637 2.8E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR01159 DNA gyrase subunit B signature 478 487 2.8E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR01159 DNA gyrase subunit B signature 382 402 2.8E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR01159 DNA gyrase subunit B signature 228 250 2.8E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR01159 DNA gyrase subunit B signature 187 202 2.8E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR01159 DNA gyrase subunit B signature 202 215 2.8E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR01159 DNA gyrase subunit B signature 320 336 2.8E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR00418 DNA topoisomerase II family signature 77 90 1.1E-70 T 13-10-2018 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR00418 DNA topoisomerase II family signature 428 442 1.1E-70 T 13-10-2018 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR00418 DNA topoisomerase II family signature 276 289 1.1E-70 T 13-10-2018 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR00418 DNA topoisomerase II family signature 584 600 1.1E-70 T 13-10-2018 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR00418 DNA topoisomerase II family signature 513 530 1.1E-70 T 13-10-2018 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR00418 DNA topoisomerase II family signature 495 511 1.1E-70 T 13-10-2018 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR00418 DNA topoisomerase II family signature 42 57 1.1E-70 T 13-10-2018 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR00418 DNA topoisomerase II family signature 120 134 1.1E-70 T 13-10-2018 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 PRINTS PR00418 DNA topoisomerase II family signature 533 545 1.1E-70 T 13-10-2018 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 181 8.2E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 580 641 4.1E-28 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 SMART SM00387 38 182 1.4E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 Gene3D G3DSA:3.30.230.10 229 400 1.1E-67 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 651 92.64 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atc_m137 061bb76f7ba357d5db8caca65a5ed109 651 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 645 9.0E-296 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atc_0700 b22bbcfd4e868feb5cd6fb0329fee9ce 114 SUPERFAMILY SSF100950 2 112 8.65E-31 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Atc_0700 b22bbcfd4e868feb5cd6fb0329fee9ce 114 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 1 106 5.8E-25 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Atc_0700 b22bbcfd4e868feb5cd6fb0329fee9ce 114 Gene3D G3DSA:3.40.50.10420 1 113 2.4E-33 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Atc_0700 b22bbcfd4e868feb5cd6fb0329fee9ce 114 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 1 106 3.2E-26 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Atc_2316 6b493de0c7d3c0afd14a159d55565734 225 Gene3D G3DSA:3.30.420.40 94 184 2.8E-59 T 13-10-2018 Atc_2316 6b493de0c7d3c0afd14a159d55565734 225 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 216 5.9E-52 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Atc_2316 6b493de0c7d3c0afd14a159d55565734 225 SUPERFAMILY SSF53067 1 100 1.1E-26 T 13-10-2018 Atc_2316 6b493de0c7d3c0afd14a159d55565734 225 Gene3D G3DSA:3.30.420.40 4 216 2.8E-59 T 13-10-2018 Atc_2316 6b493de0c7d3c0afd14a159d55565734 225 Pfam PF00814 Glycoprotease family 29 122 6.8E-26 T 13-10-2018 IPR000905 Gcp-like domain Atc_2316 6b493de0c7d3c0afd14a159d55565734 225 SUPERFAMILY SSF53067 107 214 1.42E-15 T 13-10-2018 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 Gene3D G3DSA:1.10.274.10 24 149 3.6E-67 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 SUPERFAMILY SSF52009 130 248 1.57E-30 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 Gene3D G3DSA:3.20.20.60 236 564 1.2E-107 T 13-10-2018 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 Gene3D G3DSA:3.50.30.10 7 235 3.6E-67 T 13-10-2018 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 7 128 6.8E-24 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 452 467 8.7E-22 T 13-10-2018 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 469 484 8.7E-22 T 13-10-2018 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 505 517 8.7E-22 T 13-10-2018 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 8.7E-22 T 13-10-2018 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 SUPERFAMILY SSF47831 28 146 1.83E-26 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 559 1.1E-150 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 256 545 2.1E-98 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 452 470 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 SUPERFAMILY SSF51621 253 546 2.12E-95 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 156 227 1.2E-20 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Atc_0401 b04a7ed726a72cb1540b7bb4b5d7e66e 573 PIRSF PIRSF000732 2 563 6.7E-194 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 Atc_1458 f82f778d69e95e545d842e068ec56cfe 110 SUPERFAMILY SSF101498 31 94 2.09E-7 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Atc_1458 f82f778d69e95e545d842e068ec56cfe 110 Pfam PF04316 Anti-sigma-28 factor, FlgM 48 94 2.4E-6 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Atc_1650 5e3eb23b9f8dd77b973fe04aaabe9335 771 Gene3D G3DSA:3.40.228.10 183 405 5.8E-63 T 13-10-2018 Atc_1650 5e3eb23b9f8dd77b973fe04aaabe9335 771 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 16 758 1.3E-266 T 13-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 Atc_1650 5e3eb23b9f8dd77b973fe04aaabe9335 771 PIRSF PIRSF000144 1 763 0.0 T 13-10-2018 Atc_1650 5e3eb23b9f8dd77b973fe04aaabe9335 771 Gene3D G3DSA:3.40.50.740 123 494 5.8E-63 T 13-10-2018 Atc_1650 5e3eb23b9f8dd77b973fe04aaabe9335 771 Gene3D G3DSA:2.40.40.20 646 758 1.8E-5 T 13-10-2018 Atc_1650 5e3eb23b9f8dd77b973fe04aaabe9335 771 SUPERFAMILY SSF53706 52 632 9.29E-131 T 13-10-2018 Atc_1650 5e3eb23b9f8dd77b973fe04aaabe9335 771 Pfam PF00384 Molybdopterin oxidoreductase 112 487 2.1E-20 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1650 5e3eb23b9f8dd77b973fe04aaabe9335 771 SUPERFAMILY SSF50692 641 758 2.71E-16 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atc_1650 5e3eb23b9f8dd77b973fe04aaabe9335 771 Pfam PF01568 Molydopterin dinucleotide binding domain 646 753 7.0E-9 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Atc_m139 91354f05522a02a64160f68d879f6353 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 733 764 1.9E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_m139 91354f05522a02a64160f68d879f6353 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 527 570 4.3E-8 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_m139 91354f05522a02a64160f68d879f6353 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 681 726 1.1E-11 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_m139 91354f05522a02a64160f68d879f6353 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 577 619 0.0011 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_m139 91354f05522a02a64160f68d879f6353 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 633 676 2.2E-8 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_m139 91354f05522a02a64160f68d879f6353 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 779 826 3.0E-12 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_m139 91354f05522a02a64160f68d879f6353 834 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 7 826 0.0 T 13-10-2018 Atc_m139 91354f05522a02a64160f68d879f6353 834 Gene3D G3DSA:1.10.268.10 368 479 5.0E-214 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atc_m139 91354f05522a02a64160f68d879f6353 834 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 484 3.1E-151 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_m139 91354f05522a02a64160f68d879f6353 834 Gene3D G3DSA:3.30.1360.40 235 331 5.0E-214 T 13-10-2018 Atc_m139 91354f05522a02a64160f68d879f6353 834 Gene3D G3DSA:2.120.10.90 517 826 8.9E-100 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Atc_m139 91354f05522a02a64160f68d879f6353 834 SMART SM00434 10 485 1.7E-262 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_m139 91354f05522a02a64160f68d879f6353 834 Gene3D G3DSA:3.90.199.10 32 507 5.0E-214 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Atc_m139 91354f05522a02a64160f68d879f6353 834 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 8 827 22.816 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atc_m139 91354f05522a02a64160f68d879f6353 834 SUPERFAMILY SSF56719 29 508 1.15E-172 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atc_m139 91354f05522a02a64160f68d879f6353 834 SUPERFAMILY SSF101904 520 832 7.46E-88 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Atc_2667 97ba02956fdc63081882ccde61687154 833 Gene3D G3DSA:3.40.50.2000 481 807 0.0 T 13-10-2018 Atc_2667 97ba02956fdc63081882ccde61687154 833 PIRSF PIRSF000460 19 831 1.7E-221 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Atc_2667 97ba02956fdc63081882ccde61687154 833 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 22 822 0.0 T 13-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Atc_2667 97ba02956fdc63081882ccde61687154 833 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 667 679 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Atc_2667 97ba02956fdc63081882ccde61687154 833 Gene3D G3DSA:3.40.50.2000 35 824 0.0 T 13-10-2018 Atc_2667 97ba02956fdc63081882ccde61687154 833 SUPERFAMILY SSF53756 17 825 0.0 T 13-10-2018 Atc_2667 97ba02956fdc63081882ccde61687154 833 Pfam PF00343 Carbohydrate phosphorylase 113 822 0.0 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Atc_0626 4459f7cd5daf239fc61c9ea4d26bbc1f 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.9E-36 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Atc_0626 4459f7cd5daf239fc61c9ea4d26bbc1f 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.878 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Atc_0626 4459f7cd5daf239fc61c9ea4d26bbc1f 72 Gene3D G3DSA:2.40.50.140 1 72 3.3E-35 T 13-10-2018 Atc_0626 4459f7cd5daf239fc61c9ea4d26bbc1f 72 SUPERFAMILY SSF50249 1 70 7.71E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0626 4459f7cd5daf239fc61c9ea4d26bbc1f 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 3.5E-25 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Atc_0626 4459f7cd5daf239fc61c9ea4d26bbc1f 72 SMART SM00316 4 72 4.7E-4 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_1531 c889d1f14086319fdd8eabf7bcf36e01 307 SMART SM01133 34 274 1.0E-18 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atc_1531 c889d1f14086319fdd8eabf7bcf36e01 307 Pfam PF01791 DeoC/LacD family aldolase 36 273 2.6E-41 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atc_1531 c889d1f14086319fdd8eabf7bcf36e01 307 PIRSF PIRSF038992 17 306 2.3E-58 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atc_1531 c889d1f14086319fdd8eabf7bcf36e01 307 Gene3D G3DSA:3.20.20.70 3 306 3.7E-83 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_1531 c889d1f14086319fdd8eabf7bcf36e01 307 SUPERFAMILY SSF51569 21 292 1.0E-56 T 13-10-2018 Atc_2610 33d14d085fa98ace14c425b40626f2b4 315 PIRSF PIRSF001619 2 315 1.0E-123 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Atc_2610 33d14d085fa98ace14c425b40626f2b4 315 Hamap MF_01694 Biotin synthase [bioB]. 5 314 41.496 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Atc_2610 33d14d085fa98ace14c425b40626f2b4 315 SMART SM00729 43 256 6.2E-38 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atc_2610 33d14d085fa98ace14c425b40626f2b4 315 SUPERFAMILY SSF102114 8 313 1.96E-87 T 13-10-2018 Atc_2610 33d14d085fa98ace14c425b40626f2b4 315 Pfam PF04055 Radical SAM superfamily 50 209 5.1E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_2610 33d14d085fa98ace14c425b40626f2b4 315 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 221 311 1.7E-19 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Atc_2610 33d14d085fa98ace14c425b40626f2b4 315 SMART SM00876 221 313 4.1E-44 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Atc_2610 33d14d085fa98ace14c425b40626f2b4 315 Gene3D G3DSA:3.20.20.70 7 315 5.8E-120 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2610 33d14d085fa98ace14c425b40626f2b4 315 TIGRFAM TIGR00433 bioB: biotin synthase 15 311 2.4E-118 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Atc_2125 f6873c9160d66d9d6261d8629ccaa967 337 Pfam PF14456 Alpha-helical domain 2 108 182 2.5E-11 T 13-10-2018 IPR022283 ParB-related, ThiF-related cassette, protein F Atc_2125 f6873c9160d66d9d6261d8629ccaa967 337 TIGRFAM TIGR03742 PRTRC_F: PRTRC system protein F 16 236 5.1E-18 T 13-10-2018 IPR022283 ParB-related, ThiF-related cassette, protein F Atc_3p09 11d8e0113d204bc7cd2d8fbf257225d3 207 Gene3D G3DSA:3.40.50.1390 25 147 4.2E-39 T 13-10-2018 Atc_3p09 11d8e0113d204bc7cd2d8fbf257225d3 207 SUPERFAMILY SSF53041 26 159 9.81E-40 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Atc_3p09 11d8e0113d204bc7cd2d8fbf257225d3 207 SMART SM00857 25 159 4.2E-48 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atc_3p09 11d8e0113d204bc7cd2d8fbf257225d3 207 ProSitePatterns PS00398 Site-specific recombinases signature 2. 75 87 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Atc_3p09 11d8e0113d204bc7cd2d8fbf257225d3 207 Pfam PF00239 Resolvase, N terminal domain 26 159 3.3E-39 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atc_3p09 11d8e0113d204bc7cd2d8fbf257225d3 207 ProSitePatterns PS00397 Site-specific recombinases active site. 28 36 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Atc_3p09 11d8e0113d204bc7cd2d8fbf257225d3 207 SUPERFAMILY SSF46689 161 202 7.77E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_3p09 11d8e0113d204bc7cd2d8fbf257225d3 207 Gene3D G3DSA:1.10.10.10 158 205 3.4E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_3p09 11d8e0113d204bc7cd2d8fbf257225d3 207 Pfam PF02796 Helix-turn-helix domain of resolvase 161 203 6.1E-13 T 13-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 Atc_0522 dd25ae50ae118ba92f599763b0c378e8 297 Gene3D G3DSA:1.20.1510.10 5 198 7.6E-40 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atc_0522 dd25ae50ae118ba92f599763b0c378e8 297 SUPERFAMILY SSF160240 206 275 1.7E-7 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Atc_0522 dd25ae50ae118ba92f599763b0c378e8 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 6 276 2.4E-79 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Atc_0522 dd25ae50ae118ba92f599763b0c378e8 297 SUPERFAMILY SSF161111 5 199 1.44E-50 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atc_0522 dd25ae50ae118ba92f599763b0c378e8 297 Pfam PF01545 Cation efflux family 9 198 5.9E-43 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Atc_2859 117a3107d6ddfb23860cdc97fee79ddf 568 SUPERFAMILY SSF160246 10 143 5.36E-29 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Atc_2859 117a3107d6ddfb23860cdc97fee79ddf 568 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 386 400 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_2859 117a3107d6ddfb23860cdc97fee79ddf 568 SMART SM00382 319 440 0.0011 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2859 117a3107d6ddfb23860cdc97fee79ddf 568 Gene3D G3DSA:3.30.300.160 67 146 1.4E-7 T 13-10-2018 Atc_2859 117a3107d6ddfb23860cdc97fee79ddf 568 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 14 567 2.5E-231 T 13-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 Atc_2859 117a3107d6ddfb23860cdc97fee79ddf 568 SUPERFAMILY SSF52540 179 566 1.64E-99 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2859 117a3107d6ddfb23860cdc97fee79ddf 568 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 149 9.3E-19 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal Atc_2859 117a3107d6ddfb23860cdc97fee79ddf 568 Gene3D G3DSA:3.30.450.90 160 291 1.8E-44 T 13-10-2018 Atc_2859 117a3107d6ddfb23860cdc97fee79ddf 568 Gene3D G3DSA:3.40.50.300 295 567 5.3E-107 T 13-10-2018 Atc_2859 117a3107d6ddfb23860cdc97fee79ddf 568 Pfam PF00437 Type II/IV secretion system protein 192 458 7.9E-84 T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_3p08 7db4c690920720322317290d540a759c 125 Pfam PF12840 Helix-turn-helix domain 8 69 3.2E-15 T 13-10-2018 Atc_3p08 7db4c690920720322317290d540a759c 125 SMART SM00418 8 88 5.5E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_3p08 7db4c690920720322317290d540a759c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 4.7E-5 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_3p08 7db4c690920720322317290d540a759c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 4.7E-5 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_3p08 7db4c690920720322317290d540a759c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 4.7E-5 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_3p08 7db4c690920720322317290d540a759c 125 Gene3D G3DSA:1.10.10.10 1 93 9.1E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_3p08 7db4c690920720322317290d540a759c 125 SUPERFAMILY SSF46785 4 93 5.71E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1936 ebf29e7bb44c0a7cb72f83f662dcf834 517 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 437 4.6E-24 T 13-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Atc_1936 ebf29e7bb44c0a7cb72f83f662dcf834 517 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 489 1.4E-243 T 13-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Atc_1936 ebf29e7bb44c0a7cb72f83f662dcf834 517 Pfam PF13247 4Fe-4S dicluster domain 175 270 6.5E-37 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atc_1936 ebf29e7bb44c0a7cb72f83f662dcf834 517 SUPERFAMILY SSF54862 2 489 1.78E-158 T 13-10-2018 Atc_1936 ebf29e7bb44c0a7cb72f83f662dcf834 517 Gene3D G3DSA:1.10.3650.10 358 436 2.6E-21 T 13-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Atc_1936 ebf29e7bb44c0a7cb72f83f662dcf834 517 Gene3D G3DSA:3.30.70.20 1 305 1.2E-99 T 13-10-2018 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 362 498 1.5E-17 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 SMART SM00382 358 502 4.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 SUPERFAMILY SSF54211 605 780 4.93E-57 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 Gene3D G3DSA:3.40.50.300 323 500 1.4E-60 T 13-10-2018 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 Gene3D G3DSA:2.30.130.40 19 126 1.4E-35 T 13-10-2018 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 TIGRFAM TIGR00763 lon: endopeptidase La 21 781 1.0E-303 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 20 210 6.9E-45 T 13-10-2018 IPR003111 Lon, substrate-binding domain Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 683 702 7.0E-55 T 13-10-2018 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 605 621 7.0E-55 T 13-10-2018 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 366 385 7.0E-55 T 13-10-2018 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 736 754 7.0E-55 T 13-10-2018 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 713 732 7.0E-55 T 13-10-2018 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 SUPERFAMILY SSF88697 20 210 2.73E-52 T 13-10-2018 IPR015947 PUA-like superfamily Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 Gene3D G3DSA:1.10.8.60 501 594 1.8E-34 T 13-10-2018 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 Gene3D G3DSA:1.20.58.1480 130 253 3.4E-45 T 13-10-2018 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 Hamap MF_01973 Lon protease [lon]. 20 782 71.332 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 580 782 5.0E-96 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 PIRSF PIRSF001174 10 785 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 SMART SM00464 19 211 1.3E-78 T 13-10-2018 IPR003111 Lon, substrate-binding domain Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 Gene3D G3DSA:3.30.230.10 595 782 4.3E-80 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atc_1403 90cb5956ba45426edef687ebc0d79da6 817 SUPERFAMILY SSF52540 323 598 2.16E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2455 0746c5a7dce21331d6f9e7c5a619625d 243 Pfam PF00929 Exonuclease 4 162 3.1E-33 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atc_2455 0746c5a7dce21331d6f9e7c5a619625d 243 Gene3D G3DSA:3.30.420.10 1 173 6.2E-54 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_2455 0746c5a7dce21331d6f9e7c5a619625d 243 SUPERFAMILY SSF53098 2 170 5.52E-56 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_2455 0746c5a7dce21331d6f9e7c5a619625d 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 179 2.9E-54 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2455 0746c5a7dce21331d6f9e7c5a619625d 243 SMART SM00479 2 171 1.8E-44 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atc_2455 0746c5a7dce21331d6f9e7c5a619625d 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 235 6.4E-78 T 13-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2086 fe5b6c7ae677acd8f2d479c99f5825ba 507 SUPERFAMILY SSF53098 134 301 3.6E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_2086 fe5b6c7ae677acd8f2d479c99f5825ba 507 Pfam PF00665 Integrase core domain 134 262 7.0E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_1815 fe5b6c7ae677acd8f2d479c99f5825ba 507 SUPERFAMILY SSF53098 134 301 3.6E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1815 fe5b6c7ae677acd8f2d479c99f5825ba 507 Pfam PF00665 Integrase core domain 134 262 7.0E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_1140 fe5b6c7ae677acd8f2d479c99f5825ba 507 SUPERFAMILY SSF53098 134 301 3.6E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1140 fe5b6c7ae677acd8f2d479c99f5825ba 507 Pfam PF00665 Integrase core domain 134 262 7.0E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_1943 fe5b6c7ae677acd8f2d479c99f5825ba 507 SUPERFAMILY SSF53098 134 301 3.6E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1943 fe5b6c7ae677acd8f2d479c99f5825ba 507 Pfam PF00665 Integrase core domain 134 262 7.0E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_2224 fe5b6c7ae677acd8f2d479c99f5825ba 507 SUPERFAMILY SSF53098 134 301 3.6E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_2224 fe5b6c7ae677acd8f2d479c99f5825ba 507 Pfam PF00665 Integrase core domain 134 262 7.0E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_0203 fe5b6c7ae677acd8f2d479c99f5825ba 507 SUPERFAMILY SSF53098 134 301 3.6E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_0203 fe5b6c7ae677acd8f2d479c99f5825ba 507 Pfam PF00665 Integrase core domain 134 262 7.0E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_1066 fe5b6c7ae677acd8f2d479c99f5825ba 507 SUPERFAMILY SSF53098 134 301 3.6E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1066 fe5b6c7ae677acd8f2d479c99f5825ba 507 Pfam PF00665 Integrase core domain 134 262 7.0E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_m164 fe5b6c7ae677acd8f2d479c99f5825ba 507 SUPERFAMILY SSF53098 134 301 3.6E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_m164 fe5b6c7ae677acd8f2d479c99f5825ba 507 Pfam PF00665 Integrase core domain 134 262 7.0E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_1566 fe5b6c7ae677acd8f2d479c99f5825ba 507 SUPERFAMILY SSF53098 134 301 3.6E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1566 fe5b6c7ae677acd8f2d479c99f5825ba 507 Pfam PF00665 Integrase core domain 134 262 7.0E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_2607 c897a54d54b09a6889d81c59ef429a07 276 Gene3D G3DSA:1.10.3730.10 166 272 1.7E-34 T 13-10-2018 Atc_2607 c897a54d54b09a6889d81c59ef429a07 276 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 267 25.354 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Atc_2607 c897a54d54b09a6889d81c59ef429a07 276 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 267 2.6E-72 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Atc_2607 c897a54d54b09a6889d81c59ef429a07 276 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 90 1.1E-9 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Atc_2607 c897a54d54b09a6889d81c59ef429a07 276 SUPERFAMILY SSF48179 163 269 3.57E-30 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atc_2607 c897a54d54b09a6889d81c59ef429a07 276 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 266 2.6E-33 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Atc_2607 c897a54d54b09a6889d81c59ef429a07 276 Gene3D G3DSA:3.40.50.720 2 165 1.3E-40 T 13-10-2018 Atc_2607 c897a54d54b09a6889d81c59ef429a07 276 PIRSF PIRSF000193 3 270 3.9E-68 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Atc_2607 c897a54d54b09a6889d81c59ef429a07 276 SUPERFAMILY SSF51735 5 161 6.09E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2748 660ea70837ae4aca0bab17891c89fe07 574 Gene3D G3DSA:3.40.50.300 317 557 1.6E-72 T 13-10-2018 Atc_2748 660ea70837ae4aca0bab17891c89fe07 574 Gene3D G3DSA:3.30.450.380 132 315 1.4E-39 T 13-10-2018 Atc_2748 660ea70837ae4aca0bab17891c89fe07 574 Pfam PF00437 Type II/IV secretion system protein 220 496 1.3E-85 T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_2748 660ea70837ae4aca0bab17891c89fe07 574 SMART SM00240 22 72 1.4E-5 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Atc_2748 660ea70837ae4aca0bab17891c89fe07 574 SUPERFAMILY SSF52540 205 502 3.45E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2748 660ea70837ae4aca0bab17891c89fe07 574 SUPERFAMILY SSF49879 14 94 3.16E-13 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Atc_2748 660ea70837ae4aca0bab17891c89fe07 574 Gene3D G3DSA:2.60.200.20 3 100 1.6E-11 T 13-10-2018 Atc_2748 660ea70837ae4aca0bab17891c89fe07 574 Pfam PF00498 FHA domain 23 85 6.6E-6 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Atc_0241 f95b4b58a4cfcbbe94b2f8ab07fc6f93 125 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.601 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Atc_0241 f95b4b58a4cfcbbe94b2f8ab07fc6f93 125 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 13-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 Atc_0241 f95b4b58a4cfcbbe94b2f8ab07fc6f93 125 Gene3D G3DSA:3.30.70.60 1 91 2.0E-30 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Atc_0241 f95b4b58a4cfcbbe94b2f8ab07fc6f93 125 Pfam PF01250 Ribosomal protein S6 3 90 5.5E-27 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0241 f95b4b58a4cfcbbe94b2f8ab07fc6f93 125 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 93 5.5E-33 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0241 f95b4b58a4cfcbbe94b2f8ab07fc6f93 125 SUPERFAMILY SSF54995 2 101 1.24E-34 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_1512 4935e6ca4636904a0fe844e13bd4e703 499 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 226 287 3.5E-18 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Atc_1512 4935e6ca4636904a0fe844e13bd4e703 499 Gene3D G3DSA:3.30.460.10 37 196 6.0E-58 T 13-10-2018 Atc_1512 4935e6ca4636904a0fe844e13bd4e703 499 Gene3D G3DSA:1.10.3090.10 198 449 1.6E-86 T 13-10-2018 Atc_1512 4935e6ca4636904a0fe844e13bd4e703 499 SUPERFAMILY SSF81301 46 195 1.05E-37 T 13-10-2018 Atc_1512 4935e6ca4636904a0fe844e13bd4e703 499 SUPERFAMILY SSF81891 197 439 2.35E-45 T 13-10-2018 Atc_1512 4935e6ca4636904a0fe844e13bd4e703 499 Pfam PF12626 Polymerase A arginine-rich C-terminus 344 477 4.4E-41 T 13-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain Atc_1512 4935e6ca4636904a0fe844e13bd4e703 499 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 18 481 37.587 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Atc_1512 4935e6ca4636904a0fe844e13bd4e703 499 Pfam PF01743 Poly A polymerase head domain 70 199 4.4E-35 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Atc_1512 4935e6ca4636904a0fe844e13bd4e703 499 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 40 478 1.9E-147 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Atc_1049 b2c9cc548a0e55200bd8d70322aa028b 299 Pfam PF12760 Transposase zinc-ribbon domain 17 61 3.4E-16 T 13-10-2018 IPR024442 Transposase, zinc-ribbon Atc_1049 b2c9cc548a0e55200bd8d70322aa028b 299 SMART SM01126 129 270 5.7E-37 T 13-10-2018 IPR024445 ISXO2-like transposase domain Atc_1049 b2c9cc548a0e55200bd8d70322aa028b 299 Pfam PF12762 ISXO2-like transposase domain 130 270 2.4E-24 T 13-10-2018 IPR024445 ISXO2-like transposase domain Atc_0176 b2c9cc548a0e55200bd8d70322aa028b 299 Pfam PF12760 Transposase zinc-ribbon domain 17 61 3.4E-16 T 13-10-2018 IPR024442 Transposase, zinc-ribbon Atc_0176 b2c9cc548a0e55200bd8d70322aa028b 299 SMART SM01126 129 270 5.7E-37 T 13-10-2018 IPR024445 ISXO2-like transposase domain Atc_0176 b2c9cc548a0e55200bd8d70322aa028b 299 Pfam PF12762 ISXO2-like transposase domain 130 270 2.4E-24 T 13-10-2018 IPR024445 ISXO2-like transposase domain Atc_1628 b2c9cc548a0e55200bd8d70322aa028b 299 Pfam PF12760 Transposase zinc-ribbon domain 17 61 3.4E-16 T 13-10-2018 IPR024442 Transposase, zinc-ribbon Atc_1628 b2c9cc548a0e55200bd8d70322aa028b 299 SMART SM01126 129 270 5.7E-37 T 13-10-2018 IPR024445 ISXO2-like transposase domain Atc_1628 b2c9cc548a0e55200bd8d70322aa028b 299 Pfam PF12762 ISXO2-like transposase domain 130 270 2.4E-24 T 13-10-2018 IPR024445 ISXO2-like transposase domain Atc_m059 9f0147cc019919a0fd0ca805e2d2969a 909 SUPERFAMILY SSF141868 535 780 1.57E-63 T 13-10-2018 IPR035919 EAL domain superfamily Atc_m059 9f0147cc019919a0fd0ca805e2d2969a 909 SMART SM00267 342 514 2.1E-59 T 13-10-2018 IPR000160 GGDEF domain Atc_m059 9f0147cc019919a0fd0ca805e2d2969a 909 Gene3D G3DSA:3.30.450.20 203 296 3.2E-6 T 13-10-2018 Atc_m059 9f0147cc019919a0fd0ca805e2d2969a 909 Gene3D G3DSA:3.30.450.20 45 199 2.2E-9 T 13-10-2018 Atc_m059 9f0147cc019919a0fd0ca805e2d2969a 909 Gene3D G3DSA:3.30.70.270 347 511 4.1E-54 T 13-10-2018 Atc_m059 9f0147cc019919a0fd0ca805e2d2969a 909 SUPERFAMILY SSF55073 358 506 4.55E-46 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_m059 9f0147cc019919a0fd0ca805e2d2969a 909 SMART SM00052 528 773 2.5E-67 T 13-10-2018 IPR001633 EAL domain Atc_m059 9f0147cc019919a0fd0ca805e2d2969a 909 Pfam PF00563 EAL domain 534 768 1.0E-57 T 13-10-2018 IPR001633 EAL domain Atc_m059 9f0147cc019919a0fd0ca805e2d2969a 909 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 505 1.4E-40 T 13-10-2018 IPR000160 GGDEF domain Atc_m059 9f0147cc019919a0fd0ca805e2d2969a 909 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 505 3.6E-45 T 13-10-2018 IPR000160 GGDEF domain Atc_m059 9f0147cc019919a0fd0ca805e2d2969a 909 Gene3D G3DSA:3.20.20.450 531 783 7.8E-72 T 13-10-2018 IPR035919 EAL domain superfamily Atc_0050 c689d522325553ce9466490725cf594f 315 SUPERFAMILY SSF51735 5 305 7.94E-88 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0050 c689d522325553ce9466490725cf594f 315 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 230 1.5E-58 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atc_0050 c689d522325553ce9466490725cf594f 315 Gene3D G3DSA:3.90.25.10 174 304 9.2E-92 T 13-10-2018 Atc_0050 c689d522325553ce9466490725cf594f 315 Gene3D G3DSA:3.40.50.720 9 294 9.2E-92 T 13-10-2018 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 SUPERFAMILY SSF47323 629 822 1.8E-34 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 10 581 8.4E-254 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 175 9.4E-24 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 423 624 4.1E-20 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 Gene3D G3DSA:3.10.20.590 762 822 1.5E-21 T 13-10-2018 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 Gene3D G3DSA:3.40.50.620 39 581 5.0E-259 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 Gene3D G3DSA:3.90.740.10 234 421 5.0E-259 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 SUPERFAMILY SSF50677 232 421 1.15E-56 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 Gene3D G3DSA:1.10.730.10 606 759 2.5E-47 T 13-10-2018 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 190 203 3.9E-54 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 567 577 3.9E-54 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 530 552 3.9E-54 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 132 149 3.9E-54 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 221 240 3.9E-54 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 493 511 3.9E-54 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 158 174 3.9E-54 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 227 409 8.6E-70 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 Gene3D G3DSA:2.30.210.10 582 594 5.0E-259 T 13-10-2018 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 9 822 23.199 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 Pfam PF08264 Anticodon-binding domain of tRNA 662 784 1.2E-17 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Atc_0421 dfe9a849c8ed6054ddae08e55f0f8308 823 SUPERFAMILY SSF52374 10 634 3.9E-148 T 13-10-2018 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 SUPERFAMILY SSF51621 14 930 6.12E-279 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 Gene3D G3DSA:1.20.1440.90 306 414 2.6E-6 T 13-10-2018 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 143 154 - T 13-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 578 590 - T 13-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 5 930 17.081 T 13-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 596 2.3E-60 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 254 269 2.3E-60 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 754 780 2.3E-60 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 618 647 2.3E-60 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 411 431 2.3E-60 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 142 155 2.3E-60 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 195 211 2.3E-60 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Atc_1791 a78baf4db546d0f37e785fc9f159747b 930 Pfam PF00311 Phosphoenolpyruvate carboxylase 140 930 4.7E-268 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Atc_2713 ef91ec53b7ff34a1d7199422884506ea 422 SUPERFAMILY SSF81324 147 287 3.53E-21 T 13-10-2018 Atc_2713 ef91ec53b7ff34a1d7199422884506ea 422 SUPERFAMILY SSF51735 266 396 6.99E-20 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2713 ef91ec53b7ff34a1d7199422884506ea 422 Gene3D G3DSA:1.10.287.70 160 256 8.8E-17 T 13-10-2018 Atc_2713 ef91ec53b7ff34a1d7199422884506ea 422 Pfam PF07885 Ion channel 171 243 3.4E-15 T 13-10-2018 IPR013099 Potassium channel domain Atc_2713 ef91ec53b7ff34a1d7199422884506ea 422 Gene3D G3DSA:3.40.50.720 264 410 1.6E-27 T 13-10-2018 Atc_2713 ef91ec53b7ff34a1d7199422884506ea 422 Pfam PF02254 TrkA-N domain 269 382 2.2E-14 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Atc_2p09 59025bc77de8723f0398e8e3a017aef7 185 Pfam PF02796 Helix-turn-helix domain of resolvase 138 177 2.4E-8 T 13-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 Atc_2p09 59025bc77de8723f0398e8e3a017aef7 185 SMART SM00857 2 136 2.5E-58 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atc_2p09 59025bc77de8723f0398e8e3a017aef7 185 Gene3D G3DSA:3.40.50.1390 1 125 1.6E-50 T 13-10-2018 Atc_2p09 59025bc77de8723f0398e8e3a017aef7 185 SUPERFAMILY SSF53041 1 136 3.53E-44 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Atc_2p09 59025bc77de8723f0398e8e3a017aef7 185 Pfam PF00239 Resolvase, N terminal domain 3 135 1.8E-45 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atc_2p09 59025bc77de8723f0398e8e3a017aef7 185 Gene3D G3DSA:1.10.10.60 138 184 2.5E-9 T 13-10-2018 Atc_2p09 59025bc77de8723f0398e8e3a017aef7 185 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Atc_2p09 59025bc77de8723f0398e8e3a017aef7 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Atc_2p09 59025bc77de8723f0398e8e3a017aef7 185 SUPERFAMILY SSF46689 138 181 1.04E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 SUPERFAMILY SSF53738 245 381 2.04E-9 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 Gene3D G3DSA:3.40.120.10 177 257 3.8E-30 T 13-10-2018 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 Gene3D G3DSA:3.40.120.10 1 141 2.6E-35 T 13-10-2018 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 422 469 2.7E-6 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 257 5.3E-11 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 Gene3D G3DSA:3.30.310.50 379 483 2.4E-23 T 13-10-2018 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 Gene3D G3DSA:3.40.120.10 258 377 5.9E-40 T 13-10-2018 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 SUPERFAMILY SSF53738 3 132 6.77E-24 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 SUPERFAMILY SSF55957 402 478 2.49E-11 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 132 5.0E-22 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 SUPERFAMILY SSF53738 160 259 2.28E-13 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0889 ca84568f7dfd587534d01bbc5bade763 485 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 381 1.5E-13 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2106 0494b5f8dcf7f6b90ad3ac58a5dad7af 446 SUPERFAMILY SSF56300 4 296 3.04E-28 T 13-10-2018 Atc_2106 0494b5f8dcf7f6b90ad3ac58a5dad7af 446 Gene3D G3DSA:3.60.21.10 2 263 1.0E-23 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Atc_1298 5ede93f6a28e1dd5a0c537e468a6964b 734 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 146 2.8E-8 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Atc_1298 5ede93f6a28e1dd5a0c537e468a6964b 734 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 717 734 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site Atc_1298 5ede93f6a28e1dd5a0c537e468a6964b 734 Gene3D G3DSA:2.40.170.20 159 734 2.0E-49 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atc_1298 5ede93f6a28e1dd5a0c537e468a6964b 734 Gene3D G3DSA:2.170.130.10 41 153 1.8E-8 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atc_1298 5ede93f6a28e1dd5a0c537e468a6964b 734 SUPERFAMILY SSF56935 61 734 2.09E-62 T 13-10-2018 Atc_2502 1d29a233aad34d429a8b61b30a221eb1 103 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 3.2E-21 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Atc_2502 1d29a233aad34d429a8b61b30a221eb1 103 Gene3D G3DSA:3.30.70.100 2 102 9.1E-32 T 13-10-2018 Atc_2502 1d29a233aad34d429a8b61b30a221eb1 103 SUPERFAMILY SSF54909 1 99 1.04E-29 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Atc_2467 b7bf30fa39c5e77bb864d416d3f3cb09 149 SUPERFAMILY SSF74942 82 149 1.24E-12 T 13-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Atc_2467 b7bf30fa39c5e77bb864d416d3f3cb09 149 Pfam PF02576 RimP N-terminal domain 9 81 9.3E-25 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Atc_2467 b7bf30fa39c5e77bb864d416d3f3cb09 149 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 3 149 22.653 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Atc_2467 b7bf30fa39c5e77bb864d416d3f3cb09 149 Gene3D G3DSA:3.30.300.70 2 78 3.3E-19 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily Atc_2467 b7bf30fa39c5e77bb864d416d3f3cb09 149 SUPERFAMILY SSF75420 5 81 5.23E-22 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily Atc_2467 b7bf30fa39c5e77bb864d416d3f3cb09 149 Pfam PF17384 RimP C-terminal SH3 domain 84 149 6.3E-12 T 13-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Atc_0523 35f8c10b0d26aeb5ac4ae9141abf04ff 193 SUPERFAMILY SSF53335 12 155 1.74E-22 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0523 35f8c10b0d26aeb5ac4ae9141abf04ff 193 Gene3D G3DSA:3.40.50.150 12 162 1.6E-18 T 13-10-2018 Atc_0523 35f8c10b0d26aeb5ac4ae9141abf04ff 193 Pfam PF13649 Methyltransferase domain 49 136 1.2E-6 T 13-10-2018 Atc_m179 9f7c79b78ca8a179d113b30c25ec26a1 146 Pfam PF03050 Transposase IS66 family 1 92 3.3E-25 T 13-10-2018 IPR004291 Transposase, IS66 Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 SMART SM00052 547 787 2.4E-56 T 13-10-2018 IPR001633 EAL domain Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 Pfam PF00563 EAL domain 552 782 1.6E-51 T 13-10-2018 IPR001633 EAL domain Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 254 369 4.9E-18 T 13-10-2018 IPR000014 PAS domain Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 249 2.8E-19 T 13-10-2018 IPR000014 PAS domain Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 Gene3D G3DSA:3.20.20.450 550 795 5.2E-64 T 13-10-2018 IPR035919 EAL domain superfamily Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 Gene3D G3DSA:3.30.450.20 127 257 2.3E-48 T 13-10-2018 Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 Pfam PF00990 Diguanylate cyclase, GGDEF domain 374 532 8.4E-44 T 13-10-2018 IPR000160 GGDEF domain Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 SUPERFAMILY SSF55781 2 118 2.16E-15 T 13-10-2018 Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 SMART SM00091 247 315 2.0E-4 T 13-10-2018 IPR000014 PAS domain Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 SMART SM00091 128 194 1.3E-7 T 13-10-2018 IPR000014 PAS domain Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 533 7.0E-42 T 13-10-2018 IPR000160 GGDEF domain Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 SMART SM00086 200 242 5.7E-10 T 13-10-2018 IPR001610 PAC motif Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 SMART SM00086 321 363 4.7E-5 T 13-10-2018 IPR001610 PAC motif Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 SUPERFAMILY SSF55073 379 535 7.85E-43 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 SUPERFAMILY SSF55785 258 360 2.79E-28 T 13-10-2018 IPR035965 PAS domain superfamily Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 SMART SM00267 363 537 6.9E-55 T 13-10-2018 IPR000160 GGDEF domain Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 SUPERFAMILY SSF141868 552 794 7.06E-61 T 13-10-2018 IPR035919 EAL domain superfamily Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 SUPERFAMILY SSF55785 136 240 2.62E-31 T 13-10-2018 IPR035965 PAS domain superfamily Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 Gene3D G3DSA:3.30.450.40 1 126 8.2E-14 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 Gene3D G3DSA:3.30.70.270 373 536 1.1E-51 T 13-10-2018 Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 Pfam PF13185 GAF domain 2 118 1.2E-11 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 Pfam PF13426 PAS domain 260 361 1.9E-15 T 13-10-2018 IPR000014 PAS domain Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 Pfam PF13426 PAS domain 138 240 3.0E-25 T 13-10-2018 IPR000014 PAS domain Atc_0232 e1e2e827c0939a49f67140ec92dc74e1 913 Gene3D G3DSA:3.30.450.20 258 372 7.0E-33 T 13-10-2018 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 Gene3D G3DSA:3.40.50.300 2 188 1.7E-70 T 13-10-2018 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 Pfam PF00679 Elongation factor G C-terminus 402 487 5.3E-20 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 SMART SM00838 401 489 0.0068 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 SUPERFAMILY SSF54980 295 373 5.4E-19 T 13-10-2018 IPR035647 EF-G domain III/V-like Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 Pfam PF03144 Elongation factor Tu domain 2 208 278 7.2E-9 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 Pfam PF00009 Elongation factor Tu GTP binding domain 7 184 1.3E-49 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 SUPERFAMILY SSF54980 402 496 3.45E-24 T 13-10-2018 IPR035647 EF-G domain III/V-like Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 Gene3D G3DSA:2.40.30.10 189 288 7.8E-31 T 13-10-2018 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 Gene3D G3DSA:3.30.70.870 289 370 7.3E-36 T 13-10-2018 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 8.9E-52 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 Gene3D G3DSA:3.30.70.2570 482 556 2.3E-34 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 SUPERFAMILY SSF52540 4 209 9.93E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 TIGRFAM TIGR01393 lepA: elongation factor 4 7 598 1.3E-295 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 SUPERFAMILY SSF50447 168 291 1.57E-28 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 Hamap MF_00071 Elongation factor 4 [lepA]. 1 600 298.557 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 Gene3D G3DSA:3.30.70.3380 371 481 5.3E-40 T 13-10-2018 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 177 1.3E-17 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.7E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 PRINTS PR00315 GTP-binding elongation factor signature 52 60 1.7E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.7E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.7E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2302 665f8380b5c9fea57bb2ce08379f4a34 600 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.7E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_1044 09884507807974931669743282491047 564 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 19 558 1.8E-224 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_1044 09884507807974931669743282491047 564 Gene3D G3DSA:3.50.30.80 380 529 6.1E-51 T 13-10-2018 Atc_1044 09884507807974931669743282491047 564 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_1044 09884507807974931669743282491047 564 Pfam PF00920 Dehydratase family 36 555 5.2E-206 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_1044 09884507807974931669743282491047 564 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 466 477 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_1044 09884507807974931669743282491047 564 SUPERFAMILY SSF52016 381 558 1.8E-55 T 13-10-2018 Atc_1044 09884507807974931669743282491047 564 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 6 558 44.322 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_1044 09884507807974931669743282491047 564 SUPERFAMILY SSF143975 6 379 1.7E-132 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_0621 2e217d244904a802826ed915b7f76e04 176 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 168 35.505 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Atc_0621 2e217d244904a802826ed915b7f76e04 176 Pfam PF03719 Ribosomal protein S5, C-terminal domain 91 162 4.3E-30 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Atc_0621 2e217d244904a802826ed915b7f76e04 176 SUPERFAMILY SSF54211 84 164 7.59E-28 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_0621 2e217d244904a802826ed915b7f76e04 176 Gene3D G3DSA:3.30.160.20 6 76 6.8E-27 T 13-10-2018 Atc_0621 2e217d244904a802826ed915b7f76e04 176 SUPERFAMILY SSF54768 13 80 3.98E-20 T 13-10-2018 Atc_0621 2e217d244904a802826ed915b7f76e04 176 Pfam PF00333 Ribosomal protein S5, N-terminal domain 16 79 1.8E-25 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Atc_0621 2e217d244904a802826ed915b7f76e04 176 Gene3D G3DSA:3.30.230.10 80 171 1.4E-37 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atc_0621 2e217d244904a802826ed915b7f76e04 176 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 15 168 1.4E-65 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Atc_2148 13bde3348fb48c912d1603c6cf517247 493 SMART SM01118 1 200 1.7E-21 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Atc_2148 13bde3348fb48c912d1603c6cf517247 493 SMART SM00880 226 478 1.7E-12 T 13-10-2018 IPR007899 CHAD domain Atc_2148 13bde3348fb48c912d1603c6cf517247 493 SUPERFAMILY SSF55154 1 200 2.62E-33 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Atc_2148 13bde3348fb48c912d1603c6cf517247 493 Gene3D G3DSA:1.40.20.10 209 490 1.4E-23 T 13-10-2018 IPR038186 CHAD domain superfamily Atc_2148 13bde3348fb48c912d1603c6cf517247 493 Pfam PF01928 CYTH domain 2 193 2.0E-19 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Atc_2148 13bde3348fb48c912d1603c6cf517247 493 Gene3D G3DSA:2.40.320.10 1 196 5.3E-26 T 13-10-2018 Atc_2148 13bde3348fb48c912d1603c6cf517247 493 Pfam PF05235 CHAD domain 234 445 3.9E-23 T 13-10-2018 IPR007899 CHAD domain Atc_1657 21c90764161286d3b7fac9279b58fee7 121 PRINTS PR00618 DksA/TraR zinc finger signature 95 107 2.9E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Atc_1657 21c90764161286d3b7fac9279b58fee7 121 PRINTS PR00618 DksA/TraR zinc finger signature 83 94 2.9E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Atc_1657 21c90764161286d3b7fac9279b58fee7 121 SUPERFAMILY SSF57716 80 118 8.98E-11 T 13-10-2018 Atc_1657 21c90764161286d3b7fac9279b58fee7 121 SUPERFAMILY SSF109635 1 79 8.24E-29 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily Atc_1657 21c90764161286d3b7fac9279b58fee7 121 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 1 119 28.184 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Atc_1657 21c90764161286d3b7fac9279b58fee7 121 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 78 113 4.2E-12 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Atc_1657 21c90764161286d3b7fac9279b58fee7 121 Gene3D G3DSA:1.20.120.910 1 121 3.1E-39 T 13-10-2018 Atc_1657 21c90764161286d3b7fac9279b58fee7 121 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 83 107 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Atc_1657 21c90764161286d3b7fac9279b58fee7 121 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 1 109 3.2E-50 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Atc_0444 291f65037de9c878975c70a71e44cb51 142 Gene3D G3DSA:3.90.1180.10 1 142 5.2E-62 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Atc_0444 291f65037de9c878975c70a71e44cb51 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 13-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 Atc_0444 291f65037de9c878975c70a71e44cb51 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.444 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Atc_0444 291f65037de9c878975c70a71e44cb51 142 Pfam PF00572 Ribosomal protein L13 15 137 4.8E-57 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Atc_0444 291f65037de9c878975c70a71e44cb51 142 SUPERFAMILY SSF52161 1 139 5.89E-59 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Atc_0444 291f65037de9c878975c70a71e44cb51 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 1.6E-62 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0444 291f65037de9c878975c70a71e44cb51 142 PIRSF PIRSF002181 1 142 7.2E-52 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 Pfam PF00467 KOW motif 125 158 2.3E-8 T 13-10-2018 IPR005824 KOW Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 SUPERFAMILY SSF82679 1 111 4.05E-37 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 SMART SM00738 1 109 6.3E-42 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 3 175 6.6E-69 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 Gene3D G3DSA:2.30.30.30 116 175 1.8E-26 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 SMART SM00739 121 148 1.1E-5 T 13-10-2018 IPR005824 KOW Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 Gene3D G3DSA:3.30.70.940 1 115 4.2E-44 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 ProSitePatterns PS01014 Transcription termination factor nusG signature. 158 167 - T 13-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 175 23.249 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 PRINTS PR00338 Transcription termination factor NUSG signature 55 67 3.9E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 PRINTS PR00338 Transcription termination factor NUSG signature 133 148 3.9E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 PRINTS PR00338 Transcription termination factor NUSG signature 151 167 3.9E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 SUPERFAMILY SSF50104 119 175 3.27E-20 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Atc_0593 adbb6b913b13c18078cc3c30ac87c221 175 Pfam PF02357 Transcription termination factor nusG 1 106 6.2E-26 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atc_1p10 a754ceb7ce2fb3aad3e5bd39dbd9c927 103 Pfam PF01402 Ribbon-helix-helix protein, copG family 15 44 2.0E-4 T 13-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Atc_1241 13b6bc9147faf53bbd23c3d7a9ad6387 303 Pfam PF03457 Helicase associated domain 8 64 1.4E-8 T 13-10-2018 IPR005114 Helicase-associated Atc_1241 13b6bc9147faf53bbd23c3d7a9ad6387 303 Pfam PF05063 MT-A70 121 289 1.2E-28 T 13-10-2018 IPR007757 MT-A70-like Atc_1241 13b6bc9147faf53bbd23c3d7a9ad6387 303 Gene3D G3DSA:3.40.50.150 110 260 1.5E-11 T 13-10-2018 Atc_1241 13b6bc9147faf53bbd23c3d7a9ad6387 303 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_1241 13b6bc9147faf53bbd23c3d7a9ad6387 303 SUPERFAMILY SSF53335 119 264 2.49E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 SUPERFAMILY SSF82714 705 788 3.79E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 Gene3D G3DSA:1.20.1640.10 5 495 3.6E-256 T 13-10-2018 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 Gene3D G3DSA:1.20.1640.10 496 1017 3.6E-256 T 13-10-2018 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 PRINTS PR00702 Acriflavin resistance protein family signature 31 49 1.7E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 PRINTS PR00702 Acriflavin resistance protein family signature 379 403 1.7E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 PRINTS PR00702 Acriflavin resistance protein family signature 533 550 1.7E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 PRINTS PR00702 Acriflavin resistance protein family signature 434 457 1.7E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 PRINTS PR00702 Acriflavin resistance protein family signature 3 27 1.7E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 1.7E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 1.7E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 PRINTS PR00702 Acriflavin resistance protein family signature 351 372 1.7E-36 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 SUPERFAMILY SSF82693 33 118 3.14E-20 T 13-10-2018 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 Pfam PF00873 AcrB/AcrD/AcrF family 3 1018 3.0E-225 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 SUPERFAMILY SSF82693 129 316 1.12E-17 T 13-10-2018 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 Gene3D G3DSA:3.30.2090.10 705 793 3.6E-256 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 SUPERFAMILY SSF82866 790 1023 1.57E-44 T 13-10-2018 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 Gene3D G3DSA:3.30.70.1430 550 653 3.6E-256 T 13-10-2018 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 2 1023 0.0 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 Gene3D G3DSA:3.30.70.1430 33 801 3.6E-256 T 13-10-2018 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 SUPERFAMILY SSF82714 177 259 9.16E-16 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 SUPERFAMILY SSF82866 284 487 2.75E-39 T 13-10-2018 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 Gene3D G3DSA:3.30.2090.10 173 264 3.6E-256 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 Gene3D G3DSA:3.30.70.1440 654 853 3.6E-256 T 13-10-2018 Atc_m082 4c64636549e42654eeb3d61135e28d2c 1027 Gene3D G3DSA:3.30.70.1320 126 318 3.6E-256 T 13-10-2018 Atc_0812 55e4ba8e626631217914e670d3a57e20 456 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 198 401 9.8E-24 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0812 55e4ba8e626631217914e670d3a57e20 456 TIGRFAM TIGR00767 rho: transcription termination factor Rho 40 455 1.0E-211 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Atc_0812 55e4ba8e626631217914e670d3a57e20 456 Gene3D G3DSA:1.10.720.10 37 84 1.2E-17 T 13-10-2018 Atc_0812 55e4ba8e626631217914e670d3a57e20 456 SUPERFAMILY SSF68912 39 84 7.45E-11 T 13-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Atc_0812 55e4ba8e626631217914e670d3a57e20 456 SMART SM00959 43 85 3.0E-15 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Atc_0812 55e4ba8e626631217914e670d3a57e20 456 SUPERFAMILY SSF52540 128 409 9.63E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0812 55e4ba8e626631217914e670d3a57e20 456 SUPERFAMILY SSF50249 87 163 5.14E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0812 55e4ba8e626631217914e670d3a57e20 456 Gene3D G3DSA:2.40.50.140 85 161 3.0E-33 T 13-10-2018 Atc_0812 55e4ba8e626631217914e670d3a57e20 456 Gene3D G3DSA:3.40.50.300 168 455 1.8E-129 T 13-10-2018 Atc_0812 55e4ba8e626631217914e670d3a57e20 456 SMART SM00357 90 156 3.4E-19 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Atc_0812 55e4ba8e626631217914e670d3a57e20 456 Pfam PF07498 Rho termination factor, N-terminal domain 43 84 2.8E-14 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Atc_0812 55e4ba8e626631217914e670d3a57e20 456 SMART SM00382 208 394 3.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0812 55e4ba8e626631217914e670d3a57e20 456 Pfam PF07497 Rho termination factor, RNA-binding domain 90 163 2.0E-30 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Atc_0812 55e4ba8e626631217914e670d3a57e20 456 Hamap MF_01884 Transcription termination factor Rho [rho]. 39 456 237.512 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 SUPERFAMILY SSF81296 18 114 6.3E-14 T 13-10-2018 IPR014756 Immunoglobulin E-set Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 PIRSF PIRSF000463 10 728 1.0E-291 T 13-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 SUPERFAMILY SSF81296 120 221 1.68E-29 T 13-10-2018 IPR014756 Immunoglobulin E-set Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 SUPERFAMILY SSF51445 237 622 1.78E-112 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 SMART SM00642 251 614 1.3E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 Gene3D G3DSA:3.20.20.80 224 623 1.4E-166 T 13-10-2018 Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 SUPERFAMILY SSF51011 624 727 5.76E-35 T 13-10-2018 Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 Gene3D G3DSA:2.60.40.1180 624 728 3.4E-37 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 629 725 9.0E-23 T 13-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 6.8E-281 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 44.601 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 Gene3D G3DSA:2.60.40.10 7 223 2.0E-67 T 13-10-2018 IPR013783 Immunoglobulin-like fold Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 Pfam PF00128 Alpha amylase, catalytic domain 276 345 3.2E-9 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atc_0339 8e2c42c232f545919e6cf7b3cfe7d5f7 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 208 4.6E-23 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Atc_0934 c5550e2194594304528ddebd67dc51a8 147 SUPERFAMILY SSF47240 1 141 4.6E-36 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_0934 c5550e2194594304528ddebd67dc51a8 147 PRINTS PR00601 Bacterioferritin signature 128 147 4.4E-17 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atc_0934 c5550e2194594304528ddebd67dc51a8 147 PRINTS PR00601 Bacterioferritin signature 107 127 4.4E-17 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atc_0934 c5550e2194594304528ddebd67dc51a8 147 PRINTS PR00601 Bacterioferritin signature 3 22 4.4E-17 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atc_0934 c5550e2194594304528ddebd67dc51a8 147 PRINTS PR00601 Bacterioferritin signature 23 43 4.4E-17 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atc_0934 c5550e2194594304528ddebd67dc51a8 147 PRINTS PR00601 Bacterioferritin signature 86 106 4.4E-17 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atc_0934 c5550e2194594304528ddebd67dc51a8 147 PRINTS PR00601 Bacterioferritin signature 65 85 4.4E-17 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atc_0934 c5550e2194594304528ddebd67dc51a8 147 PRINTS PR00601 Bacterioferritin signature 44 64 4.4E-17 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atc_0934 c5550e2194594304528ddebd67dc51a8 147 PIRSF PIRSF002560 1 145 1.2E-30 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atc_0934 c5550e2194594304528ddebd67dc51a8 147 Gene3D G3DSA:1.20.1260.10 1 145 2.1E-41 T 13-10-2018 IPR012347 Ferritin-like Atc_0934 c5550e2194594304528ddebd67dc51a8 147 Pfam PF00210 Ferritin-like domain 10 139 4.4E-22 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Atc_0175 4f5372ab5214405c5bf115f283365a81 153 Pfam PF01609 Transposase DDE domain 4 143 1.3E-22 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 SUPERFAMILY SSF82714 186 267 1.7E-14 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 Gene3D G3DSA:3.30.2090.10 182 273 1.2E-251 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 Gene3D G3DSA:3.30.70.1440 663 862 1.2E-251 T 13-10-2018 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 SUPERFAMILY SSF82866 295 496 3.92E-38 T 13-10-2018 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 4.4E-43 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 4.4E-43 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 4.4E-43 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 4.4E-43 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 4.4E-43 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 4.4E-43 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 4.4E-43 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 4.4E-43 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 Gene3D G3DSA:3.30.70.1320 135 327 1.2E-251 T 13-10-2018 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 Gene3D G3DSA:1.20.1640.10 505 1026 1.2E-251 T 13-10-2018 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 Pfam PF00873 AcrB/AcrD/AcrF family 6 1027 6.7E-226 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 SUPERFAMILY SSF82693 137 325 2.75E-16 T 13-10-2018 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1033 0.0 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 SUPERFAMILY SSF82866 796 1034 3.66E-43 T 13-10-2018 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 Gene3D G3DSA:3.30.70.1430 42 810 1.2E-251 T 13-10-2018 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 Gene3D G3DSA:1.20.1640.10 12 504 1.2E-251 T 13-10-2018 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 Gene3D G3DSA:3.30.70.1430 559 662 1.2E-251 T 13-10-2018 Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 Gene3D G3DSA:3.30.2090.10 714 802 1.2E-251 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 SUPERFAMILY SSF82714 714 798 2.22E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1883 2b5fcca48e6b6c70170dd8aae3d0b4f9 1036 SUPERFAMILY SSF82693 42 127 1.01E-20 T 13-10-2018 Atc_1085 cf411aa4db485a3d5f91bd6c61339c1d 363 Pfam PF00872 Transposase, Mutator family 2 327 3.0E-63 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Atc_1656 1baf39cb18834f887064e0ce4cf01640 261 Gene3D G3DSA:3.40.50.1000 6 215 5.9E-70 T 13-10-2018 IPR023214 HAD superfamily Atc_1656 1baf39cb18834f887064e0ce4cf01640 261 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 151 197 2.0E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_1656 1baf39cb18834f887064e0ce4cf01640 261 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 197 1.1E-22 T 13-10-2018 Atc_1656 1baf39cb18834f887064e0ce4cf01640 261 SUPERFAMILY SSF56784 4 220 1.79E-41 T 13-10-2018 IPR036412 HAD-like superfamily Atc_1656 1baf39cb18834f887064e0ce4cf01640 261 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.2E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_1656 1baf39cb18834f887064e0ce4cf01640 261 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 2.2E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_1656 1baf39cb18834f887064e0ce4cf01640 261 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 2.2E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_1656 1baf39cb18834f887064e0ce4cf01640 261 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 2.2E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_1656 1baf39cb18834f887064e0ce4cf01640 261 Gene3D G3DSA:1.10.150.240 17 95 5.9E-70 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atc_0675 3c8ebfa641cdbc3cd1805d86a7c0ac8e 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 172 3.8E-11 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Atc_0675 3c8ebfa641cdbc3cd1805d86a7c0ac8e 740 Gene3D G3DSA:2.40.170.20 192 740 5.2E-59 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atc_0675 3c8ebfa641cdbc3cd1805d86a7c0ac8e 740 SUPERFAMILY SSF56935 59 740 4.76E-74 T 13-10-2018 Atc_0675 3c8ebfa641cdbc3cd1805d86a7c0ac8e 740 Pfam PF00593 TonB dependent receptor 262 738 1.3E-30 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atc_0675 3c8ebfa641cdbc3cd1805d86a7c0ac8e 740 Gene3D G3DSA:2.170.130.10 65 185 1.7E-12 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atc_2376 7a40f2b55188309b3e6560a4e2227fb8 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 1.9E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_2376 7a40f2b55188309b3e6560a4e2227fb8 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 1.9E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_2376 7a40f2b55188309b3e6560a4e2227fb8 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 1.9E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_2376 7a40f2b55188309b3e6560a4e2227fb8 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 369 1.5E-7 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_2376 7a40f2b55188309b3e6560a4e2227fb8 388 SUPERFAMILY SSF56601 16 283 7.43E-75 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_2376 7a40f2b55188309b3e6560a4e2227fb8 388 Gene3D G3DSA:2.60.410.10 283 373 5.8E-13 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_2376 7a40f2b55188309b3e6560a4e2227fb8 388 SMART SM00936 283 373 5.3E-10 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_2376 7a40f2b55188309b3e6560a4e2227fb8 388 Gene3D G3DSA:3.40.710.10 28 281 9.1E-85 T 13-10-2018 Atc_2376 7a40f2b55188309b3e6560a4e2227fb8 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 45 262 9.2E-72 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Atc_2376 7a40f2b55188309b3e6560a4e2227fb8 388 SUPERFAMILY SSF69189 275 367 1.18E-9 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_m030 80a6af5c1190e9fa4643587f16b81488 306 SUPERFAMILY SSF46785 3 111 2.72E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_m030 80a6af5c1190e9fa4643587f16b81488 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.1E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_m030 80a6af5c1190e9fa4643587f16b81488 306 Pfam PF03466 LysR substrate binding domain 90 294 2.5E-29 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_m030 80a6af5c1190e9fa4643587f16b81488 306 Gene3D G3DSA:1.10.10.10 1 90 4.8E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_m030 80a6af5c1190e9fa4643587f16b81488 306 Gene3D G3DSA:3.40.190.290 91 303 2.0E-34 T 13-10-2018 Atc_m030 80a6af5c1190e9fa4643587f16b81488 306 SUPERFAMILY SSF53850 91 299 1.45E-31 T 13-10-2018 Atc_1997 89474cc02b51e74c178b9ca87c2e6394 444 SUPERFAMILY SSF56349 129 419 2.04E-29 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_1997 89474cc02b51e74c178b9ca87c2e6394 444 Gene3D G3DSA:1.10.150.130 123 228 1.3E-10 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_1997 89474cc02b51e74c178b9ca87c2e6394 444 Pfam PF00589 Phage integrase family 242 396 1.7E-5 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_1997 89474cc02b51e74c178b9ca87c2e6394 444 Gene3D G3DSA:3.30.160.390 1 103 6.5E-23 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Atc_1997 89474cc02b51e74c178b9ca87c2e6394 444 Pfam PF13356 Arm DNA-binding domain 3 85 8.3E-15 T 13-10-2018 IPR025166 Integrase, DNA-binding domain Atc_1997 89474cc02b51e74c178b9ca87c2e6394 444 Gene3D G3DSA:1.10.443.10 241 425 4.2E-7 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_0932 44b1c805b85ca36fcacd2fa8efdc285a 98 Pfam PF00936 BMC domain 8 83 2.0E-24 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Atc_0932 44b1c805b85ca36fcacd2fa8efdc285a 98 Gene3D G3DSA:3.30.70.1710 1 90 1.4E-35 T 13-10-2018 Atc_0932 44b1c805b85ca36fcacd2fa8efdc285a 98 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 8 69 1.0E-19 T 13-10-2018 Atc_0932 44b1c805b85ca36fcacd2fa8efdc285a 98 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 25 44 - T 13-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Atc_0932 44b1c805b85ca36fcacd2fa8efdc285a 98 SMART SM00877 7 84 4.5E-29 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Atc_0932 44b1c805b85ca36fcacd2fa8efdc285a 98 SUPERFAMILY SSF143414 8 94 3.27E-27 T 13-10-2018 IPR037233 CcmK-like superfamily Atc_2325 933ecf9e8e1e033b6bacac9a9579e11d 213 Pfam PF09335 SNARE associated Golgi protein 50 172 5.5E-19 T 13-10-2018 IPR032816 SNARE associated Golgi protein Atc_0892 51bd9146e8412cf427e1f913da3653e0 74 Gene3D G3DSA:3.40.1620.10 1 36 1.3E-6 T 13-10-2018 Atc_0892 51bd9146e8412cf427e1f913da3653e0 74 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 38 1.9E-6 T 13-10-2018 Atc_0892 51bd9146e8412cf427e1f913da3653e0 74 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 2 38 4.4E-7 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Atc_0892 51bd9146e8412cf427e1f913da3653e0 74 SUPERFAMILY SSF143120 1 38 1.44E-7 T 13-10-2018 IPR036165 YefM-like superfamily Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 Gene3D G3DSA:3.50.50.60 253 396 6.9E-41 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 SUPERFAMILY SSF46548 6 155 3.19E-40 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 SUPERFAMILY SSF51971 143 397 5.06E-68 T 13-10-2018 Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 3.2E-37 T 13-10-2018 Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 PRINTS PR00419 Adrenodoxin reductase family signature 321 334 3.2E-37 T 13-10-2018 Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 PRINTS PR00419 Adrenodoxin reductase family signature 287 301 3.2E-37 T 13-10-2018 Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 3.2E-37 T 13-10-2018 Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 3.2E-37 T 13-10-2018 Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 5 464 4.7E-235 T 13-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 131 9.6E-37 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 Gene3D G3DSA:1.10.1060.10 9 143 6.5E-34 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 451 7.3E-30 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_1781 694d6816c3f23b4f1d4fee343993adb7 464 Gene3D G3DSA:3.40.50.720 144 252 3.8E-13 T 13-10-2018 Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 129 398 9.5E-103 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 SMART SM00962 198 399 7.5E-109 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 Pfam PF00448 SRP54-type protein, GTPase domain 199 398 2.1E-73 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 SMART SM00963 103 184 9.3E-22 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 127 399 58.578 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 SMART SM00382 197 389 7.9E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 SUPERFAMILY SSF52540 192 398 3.62E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 SUPERFAMILY SSF47364 98 177 1.44E-18 T 13-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 Gene3D G3DSA:1.20.120.140 100 397 8.6E-112 T 13-10-2018 Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 Pfam PF02881 SRP54-type protein, helical bundle domain 122 180 4.2E-11 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 372 385 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atc_0473 acbaf2b1af501acb4f4f14758eb8e98c 403 Gene3D G3DSA:3.40.50.300 198 387 8.6E-112 T 13-10-2018 Atc_2564 4e15a502fda2494dd366f8aad3ec6b3c 147 Gene3D G3DSA:1.25.10.10 16 142 4.9E-16 T 13-10-2018 IPR011989 Armadillo-like helical Atc_2564 4e15a502fda2494dd366f8aad3ec6b3c 147 SUPERFAMILY SSF48371 17 129 1.06E-11 T 13-10-2018 IPR016024 Armadillo-type fold Atc_0597 7e09df21af7d0da2874dad77d7dfb4f4 129 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 63 129 6.9E-31 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0597 7e09df21af7d0da2874dad77d7dfb4f4 129 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 65 129 8.0E-22 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0597 7e09df21af7d0da2874dad77d7dfb4f4 129 SUPERFAMILY SSF48300 4 65 3.92E-16 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0597 7e09df21af7d0da2874dad77d7dfb4f4 129 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 129 25.236 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0597 7e09df21af7d0da2874dad77d7dfb4f4 129 SUPERFAMILY SSF54736 58 129 1.52E-24 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Atc_0597 7e09df21af7d0da2874dad77d7dfb4f4 129 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 49 5.2E-17 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0597 7e09df21af7d0da2874dad77d7dfb4f4 129 Gene3D G3DSA:3.30.1390.10 59 129 8.0E-31 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Atc_0597 7e09df21af7d0da2874dad77d7dfb4f4 129 Gene3D G3DSA:1.20.5.710 3 58 6.2E-20 T 13-10-2018 Atc_0597 7e09df21af7d0da2874dad77d7dfb4f4 129 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 129 4.1E-47 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2197 7c2113760ebed0d50fd9ba928f507e09 460 Pfam PF00324 Amino acid permease 22 443 9.7E-18 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Atc_2197 7c2113760ebed0d50fd9ba928f507e09 460 PIRSF PIRSF006060 3 460 4.9E-41 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_2197 7c2113760ebed0d50fd9ba928f507e09 460 Gene3D G3DSA:1.20.1740.10 14 456 2.9E-30 T 13-10-2018 Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 Gene3D G3DSA:1.20.120.790 492 625 6.9E-44 T 13-10-2018 IPR037196 HSP90, C-terminal domain Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 183 2.3E-11 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 SUPERFAMILY SSF54211 230 485 1.52E-95 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 Gene3D G3DSA:3.30.230.80 229 396 3.0E-67 T 13-10-2018 Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 Gene3D G3DSA:3.40.50.11260 397 486 3.4E-31 T 13-10-2018 Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 SMART SM00387 27 184 2.5E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 SUPERFAMILY SSF55874 5 211 2.75E-63 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 SUPERFAMILY SSF110942 512 624 5.75E-35 T 13-10-2018 IPR037196 HSP90, C-terminal domain Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 624 32.641 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 Pfam PF00183 Hsp90 protein 222 623 3.2E-126 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 PRINTS PR00775 90kDa heat shock protein signature 191 209 2.8E-59 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 PRINTS PR00775 90kDa heat shock protein signature 172 189 2.8E-59 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 PRINTS PR00775 90kDa heat shock protein signature 26 48 2.8E-59 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 PRINTS PR00775 90kDa heat shock protein signature 75 92 2.8E-59 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 PRINTS PR00775 90kDa heat shock protein signature 93 110 2.8E-59 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 PRINTS PR00775 90kDa heat shock protein signature 120 142 2.8E-59 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 PRINTS PR00775 90kDa heat shock protein signature 5 25 2.8E-59 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 13-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 PIRSF PIRSF002583 1 628 5.2E-209 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Atc_2270 1af83a56f3f5213b867bc039f9717df4 628 Gene3D G3DSA:3.30.565.10 1 223 6.7E-76 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1299 516ead42fb36706d68ce20793c8be9f4 364 SUPERFAMILY SSF54373 224 311 6.8E-18 T 13-10-2018 Atc_1299 516ead42fb36706d68ce20793c8be9f4 364 SUPERFAMILY SSF51905 5 359 4.34E-44 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1299 516ead42fb36706d68ce20793c8be9f4 364 Pfam PF01266 FAD dependent oxidoreductase 5 349 4.2E-66 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atc_1299 516ead42fb36706d68ce20793c8be9f4 364 Gene3D G3DSA:3.50.50.60 5 351 8.8E-85 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1299 516ead42fb36706d68ce20793c8be9f4 364 Gene3D G3DSA:3.30.9.10 91 310 8.8E-85 T 13-10-2018 Atc_3p15 add0aa0caca19f1b68b115a34ba5e627 83 SUPERFAMILY SSF89447 3 42 4.19E-6 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Atc_3p15 add0aa0caca19f1b68b115a34ba5e627 83 Gene3D G3DSA:2.10.260.10 2 42 1.0E-5 T 13-10-2018 Atc_3p15 add0aa0caca19f1b68b115a34ba5e627 83 SMART SM00966 4 50 0.0013 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atc_2644 b53e7894b94f6f0ae08ed2eccd0b8579 407 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 13 407 1.4E-118 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atc_2644 b53e7894b94f6f0ae08ed2eccd0b8579 407 Gene3D G3DSA:3.60.70.12 9 277 4.0E-87 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atc_2644 b53e7894b94f6f0ae08ed2eccd0b8579 407 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 31 405 2.0E-102 T 13-10-2018 Atc_2644 b53e7894b94f6f0ae08ed2eccd0b8579 407 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 407 151.54 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atc_2644 b53e7894b94f6f0ae08ed2eccd0b8579 407 Gene3D G3DSA:3.10.20.340 278 407 1.8E-40 T 13-10-2018 Atc_2644 b53e7894b94f6f0ae08ed2eccd0b8579 407 SUPERFAMILY SSF56266 14 404 1.16E-133 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atc_2644 b53e7894b94f6f0ae08ed2eccd0b8579 407 Pfam PF01960 ArgJ family 20 407 1.1E-138 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 4.2E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 520 534 4.2E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 4.2E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 476 492 4.2E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 Gene3D G3DSA:3.30.930.10 118 584 1.0E-193 T 13-10-2018 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 2.1E-238 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 586 33.814 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 Gene3D G3DSA:3.30.1360.30 273 422 1.0E-193 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 Gene3D G3DSA:2.40.50.140 1 106 3.6E-31 T 13-10-2018 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 Pfam PF01336 OB-fold nucleic acid binding domain 20 101 1.2E-15 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 SUPERFAMILY SSF50249 1 105 1.3E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_2790 b4870c23154422fd292dbe7de2b72478 596 SUPERFAMILY SSF55261 290 421 3.27E-40 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 560 2.9E-108 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 Pfam PF02938 GAD domain 309 408 7.7E-27 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Atc_2790 b4870c23154422fd292dbe7de2b72478 596 SUPERFAMILY SSF55681 110 586 1.36E-108 T 13-10-2018 Atc_0380 00be8cf80c21bdb0b4383a4a10b49578 368 Pfam PF10442 FIST C domain 226 338 2.2E-8 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Atc_0380 00be8cf80c21bdb0b4383a4a10b49578 368 SMART SM01204 203 341 3.2E-5 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Atc_0833 cda7d4a4ebe5e23bf7832343e4020009 64 PIRSF PIRSF039003 1 64 3.0E-34 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Atc_0833 cda7d4a4ebe5e23bf7832343e4020009 64 SUPERFAMILY SSF140319 1 62 1.57E-25 T 13-10-2018 IPR036762 IscX-like superfamily Atc_0833 cda7d4a4ebe5e23bf7832343e4020009 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 2.4E-33 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Atc_0833 cda7d4a4ebe5e23bf7832343e4020009 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 7.0E-34 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Atc_0833 cda7d4a4ebe5e23bf7832343e4020009 64 Gene3D G3DSA:1.10.10.600 1 64 4.5E-29 T 13-10-2018 IPR036762 IscX-like superfamily Atc_2072 094606ebaf55416c956d63eb5cc0f869 88 Gene3D G3DSA:1.10.1220.10 5 53 1.6E-15 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Atc_2072 094606ebaf55416c956d63eb5cc0f869 88 Pfam PF04221 RelB antitoxin 7 73 2.8E-22 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Atc_2072 094606ebaf55416c956d63eb5cc0f869 88 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 84 5.9E-22 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Atc_2072 094606ebaf55416c956d63eb5cc0f869 88 PIRSF PIRSF003108 1 88 1.7E-30 T 13-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SMART SM00086 246 288 28.0 T 13-10-2018 IPR001610 PAC motif Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SMART SM00086 374 417 0.69 T 13-10-2018 IPR001610 PAC motif Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Gene3D G3DSA:1.10.287.130 610 691 2.3E-27 T 13-10-2018 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Pfam PF13185 GAF domain 452 594 5.9E-16 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SUPERFAMILY SSF55874 680 855 6.94E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Pfam PF00512 His Kinase A (phospho-acceptor) domain 623 691 1.2E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SUPERFAMILY SSF47384 608 692 6.87E-24 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SUPERFAMILY SSF55785 309 415 8.2E-14 T 13-10-2018 IPR035965 PAS domain superfamily Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Pfam PF08448 PAS fold 182 287 1.7E-13 T 13-10-2018 IPR013656 PAS fold-4 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Gene3D G3DSA:3.30.450.20 301 368 5.7E-10 T 13-10-2018 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 739 853 1.2E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SMART SM00387 737 855 2.4E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Gene3D G3DSA:3.30.450.40 13 164 7.9E-7 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Gene3D G3DSA:3.30.450.40 419 608 9.4E-15 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_1719 73a2d02df60032165a8adf804c90653e 1018 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 173 291 7.0E-9 T 13-10-2018 IPR000014 PAS domain Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SUPERFAMILY SSF52172 884 1001 1.32E-25 T 13-10-2018 IPR011006 CheY-like superfamily Atc_1719 73a2d02df60032165a8adf804c90653e 1018 PRINTS PR00344 Bacterial sensor protein C-terminal signature 781 795 3.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 833 3.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 PRINTS PR00344 Bacterial sensor protein C-terminal signature 839 852 3.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 PRINTS PR00344 Bacterial sensor protein C-terminal signature 799 809 3.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Gene3D G3DSA:3.40.50.12740 885 1015 6.9E-27 T 13-10-2018 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Gene3D G3DSA:2.10.70.100 372 417 3.7E-7 T 13-10-2018 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SMART SM00448 885 1000 1.4E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Pfam PF01590 GAF domain 28 147 8.1E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SUPERFAMILY SSF55785 161 286 6.11E-17 T 13-10-2018 IPR035965 PAS domain superfamily Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Pfam PF08447 PAS fold 323 410 2.0E-9 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SUPERFAMILY SSF55781 28 155 3.71E-8 T 13-10-2018 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Pfam PF00072 Response regulator receiver domain 887 998 8.4E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SUPERFAMILY SSF55781 452 607 4.8E-13 T 13-10-2018 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SMART SM00065 433 604 0.0023 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SMART SM00065 25 160 0.0048 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SMART SM00091 296 368 69.0 T 13-10-2018 IPR000014 PAS domain Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SMART SM00091 175 240 1.6E-4 T 13-10-2018 IPR000014 PAS domain Atc_1719 73a2d02df60032165a8adf804c90653e 1018 SMART SM00388 623 691 3.9E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Gene3D G3DSA:3.30.565.10 692 858 6.4E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1719 73a2d02df60032165a8adf804c90653e 1018 Gene3D G3DSA:3.30.450.20 165 300 4.5E-19 T 13-10-2018 Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 SMART SM00091 20 86 1.7 T 13-10-2018 IPR000014 PAS domain Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 SMART SM00091 145 212 4.3E-7 T 13-10-2018 IPR000014 PAS domain Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 Gene3D G3DSA:3.30.450.20 33 130 1.5E-7 T 13-10-2018 Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 SMART SM00267 257 430 4.4E-47 T 13-10-2018 IPR000160 GGDEF domain Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 SUPERFAMILY SSF55073 273 429 8.63E-40 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 427 3.0E-39 T 13-10-2018 IPR000160 GGDEF domain Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 Pfam PF00990 Diguanylate cyclase, GGDEF domain 269 425 1.1E-34 T 13-10-2018 IPR000160 GGDEF domain Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 SUPERFAMILY SSF55785 39 141 3.87E-8 T 13-10-2018 IPR035965 PAS domain superfamily Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 264 3.0E-18 T 13-10-2018 IPR000014 PAS domain Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 Pfam PF13426 PAS domain 161 256 3.8E-11 T 13-10-2018 IPR000014 PAS domain Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 Pfam PF13426 PAS domain 35 97 0.086 T 13-10-2018 IPR000014 PAS domain Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 Gene3D G3DSA:3.30.70.270 260 430 2.7E-45 T 13-10-2018 Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 SMART SM00086 93 133 310.0 T 13-10-2018 IPR001610 PAC motif Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 SMART SM00086 215 257 0.011 T 13-10-2018 IPR001610 PAC motif Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 SUPERFAMILY SSF55785 130 255 4.99E-23 T 13-10-2018 IPR035965 PAS domain superfamily Atc_1092 508e1bfa9505b4972b1eefe4f7104394 442 Gene3D G3DSA:3.30.450.20 131 259 2.2E-21 T 13-10-2018 Atc_0652 6caadbb93d4de5df034a7425604bcfff 314 Pfam PF01040 UbiA prenyltransferase family 39 279 1.6E-50 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Atc_0652 6caadbb93d4de5df034a7425604bcfff 314 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 78 100 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site Atc_0652 6caadbb93d4de5df034a7425604bcfff 314 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 26 304 2.6E-84 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Atc_0652 6caadbb93d4de5df034a7425604bcfff 314 Gene3D G3DSA:1.10.357.140 32 198 6.5E-18 T 13-10-2018 Atc_0652 6caadbb93d4de5df034a7425604bcfff 314 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 23 307 17.952 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Atc_2881 41922c2092c50f35f98b516b668d4cb0 267 Pfam PF08543 Phosphomethylpyrimidine kinase 14 250 4.9E-60 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Atc_2881 41922c2092c50f35f98b516b668d4cb0 267 Gene3D G3DSA:3.40.1190.20 1 260 1.7E-68 T 13-10-2018 IPR029056 Ribokinase-like Atc_2881 41922c2092c50f35f98b516b668d4cb0 267 SUPERFAMILY SSF53613 4 252 4.37E-58 T 13-10-2018 IPR029056 Ribokinase-like Atc_2686 10536caefafdaf2e14aba5acf1931b4d 365 SUPERFAMILY SSF50685 93 180 2.98E-8 T 13-10-2018 IPR036908 RlpA-like domain superfamily Atc_2686 10536caefafdaf2e14aba5acf1931b4d 365 Pfam PF03330 Lytic transglycolase 89 177 4.3E-18 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Atc_2686 10536caefafdaf2e14aba5acf1931b4d 365 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 5 180 20.446 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Atc_2686 10536caefafdaf2e14aba5acf1931b4d 365 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 90 183 4.0E-30 T 13-10-2018 IPR012997 Rare lipoprotein A Atc_2686 10536caefafdaf2e14aba5acf1931b4d 365 Gene3D G3DSA:2.40.40.10 88 180 4.9E-28 T 13-10-2018 IPR036908 RlpA-like domain superfamily Atc_2042 cedb3100e54154d8a5012ef91c702b74 538 PRINTS PR00811 Bacterial general secretion pathway protein D signature 490 508 7.0E-9 T 13-10-2018 IPR001775 GspD/PilQ family Atc_2042 cedb3100e54154d8a5012ef91c702b74 538 PRINTS PR00811 Bacterial general secretion pathway protein D signature 349 373 7.0E-9 T 13-10-2018 IPR001775 GspD/PilQ family Atc_2042 cedb3100e54154d8a5012ef91c702b74 538 PRINTS PR00811 Bacterial general secretion pathway protein D signature 513 527 7.0E-9 T 13-10-2018 IPR001775 GspD/PilQ family Atc_2042 cedb3100e54154d8a5012ef91c702b74 538 Pfam PF00263 Bacterial type II and III secretion system protein 353 524 2.6E-29 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Atc_2164 d535816638b5651f37c9ca7107c3e257 444 SMART SM01091 354 433 6.3E-18 T 13-10-2018 IPR005170 Transporter-associated domain Atc_2164 d535816638b5651f37c9ca7107c3e257 444 Gene3D G3DSA:3.10.580.10 202 347 1.6E-33 T 13-10-2018 Atc_2164 d535816638b5651f37c9ca7107c3e257 444 Pfam PF01595 Domain of unknown function DUF21 9 200 1.3E-44 T 13-10-2018 IPR002550 CNNM, transmembrane domain Atc_2164 d535816638b5651f37c9ca7107c3e257 444 Pfam PF03471 Transporter associated domain 355 429 5.1E-15 T 13-10-2018 IPR005170 Transporter-associated domain Atc_2164 d535816638b5651f37c9ca7107c3e257 444 SUPERFAMILY SSF56176 352 434 9.54E-16 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atc_2164 d535816638b5651f37c9ca7107c3e257 444 Pfam PF00571 CBS domain 220 276 1.0E-4 T 13-10-2018 IPR000644 CBS domain Atc_2164 d535816638b5651f37c9ca7107c3e257 444 Pfam PF00571 CBS domain 290 339 2.4E-4 T 13-10-2018 IPR000644 CBS domain Atc_2164 d535816638b5651f37c9ca7107c3e257 444 SUPERFAMILY SSF54631 209 348 1.89E-24 T 13-10-2018 Atc_2164 d535816638b5651f37c9ca7107c3e257 444 Gene3D G3DSA:3.30.465.10 348 433 1.0E-14 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atc_0392 15ea09ab05770d1097fc92a1bbc6f586 298 SUPERFAMILY SSF53448 3 271 9.69E-62 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0392 15ea09ab05770d1097fc92a1bbc6f586 298 Pfam PF00483 Nucleotidyl transferase 11 265 1.3E-26 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Atc_0392 15ea09ab05770d1097fc92a1bbc6f586 298 Gene3D G3DSA:3.90.550.10 1 290 1.3E-85 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0392 15ea09ab05770d1097fc92a1bbc6f586 298 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 265 3.1E-112 T 13-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 SUPERFAMILY SSF46689 380 474 6.72E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 454 2.5E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 454 474 2.5E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 Gene3D G3DSA:1.10.10.60 380 474 3.1E-18 T 13-10-2018 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 Gene3D G3DSA:3.40.50.2300 1 121 2.4E-36 T 13-10-2018 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 Pfam PF00072 Response regulator receiver domain 5 114 2.8E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 SMART SM00448 3 114 1.9E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 Gene3D G3DSA:1.10.8.60 311 377 1.2E-20 T 13-10-2018 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 Pfam PF02954 Bacterial regulatory protein, Fis family 433 471 4.9E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 SUPERFAMILY SSF52172 5 185 1.99E-41 T 13-10-2018 IPR011006 CheY-like superfamily Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 SMART SM00382 160 303 7.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 Pfam PF00158 Sigma-54 interaction domain 140 306 2.0E-67 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 SUPERFAMILY SSF52540 139 383 5.14E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 Gene3D G3DSA:3.40.50.300 126 310 8.9E-65 T 13-10-2018 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 5 471 1.4E-211 T 13-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 Atc_1866 cd359a471ead707f6c8e5e17737f564e 481 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atc_0670 e6ce56b163ca0492a4ff1e0f35409c95 312 Gene3D G3DSA:3.40.50.720 1 307 1.5E-48 T 13-10-2018 Atc_0670 e6ce56b163ca0492a4ff1e0f35409c95 312 SUPERFAMILY SSF51735 1 304 1.3E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0670 e6ce56b163ca0492a4ff1e0f35409c95 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 230 9.0E-25 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atc_1472 0120b7f766386182ae1ffaad9799df3e 259 Gene3D G3DSA:3.40.50.150 27 241 5.3E-36 T 13-10-2018 Atc_1472 0120b7f766386182ae1ffaad9799df3e 259 Pfam PF13489 Methyltransferase domain 31 189 4.0E-14 T 13-10-2018 Atc_1472 0120b7f766386182ae1ffaad9799df3e 259 SUPERFAMILY SSF53335 23 204 3.44E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1488 bbf591864eae7b94d36ddd482e857782 154 Pfam PF02050 Flagellar FliJ protein 29 141 2.2E-8 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 512 2.7E-253 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 3.9E-76 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 1.5E-47 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 51.445 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 Gene3D G3DSA:1.20.150.20 384 514 2.9E-49 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 93 4.2E-14 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 Gene3D G3DSA:3.40.50.300 95 383 2.6E-131 T 13-10-2018 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 SUPERFAMILY SSF50615 11 95 4.12E-26 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 SUPERFAMILY SSF52540 96 382 1.13E-95 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 PIRSF PIRSF039088 2 514 9.9E-239 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 Gene3D G3DSA:2.40.30.20 2 94 2.0E-30 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0031 c8234d2fe7b56bacf32c9f3c85ffe915 514 SUPERFAMILY SSF47917 384 511 9.42E-47 T 13-10-2018 Atc_0938 fab6564e65ba8329f154b2c90ce5113c 787 SUPERFAMILY SSF53300 593 782 3.86E-22 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atc_0938 fab6564e65ba8329f154b2c90ce5113c 787 Pfam PF00092 von Willebrand factor type A domain 595 749 3.1E-7 T 13-10-2018 IPR002035 von Willebrand factor, type A Atc_0938 fab6564e65ba8329f154b2c90ce5113c 787 Gene3D G3DSA:3.40.50.410 585 771 4.5E-19 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atc_0938 fab6564e65ba8329f154b2c90ce5113c 787 SMART SM00327 592 779 2.6E-13 T 13-10-2018 IPR002035 von Willebrand factor, type A Atc_m129 1ea530991e67604864c54849a694f3b8 622 SMART SM00532 14 411 9.7E-16 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Atc_m129 1ea530991e67604864c54849a694f3b8 622 Gene3D G3DSA:3.30.470.90 78 225 1.4E-8 T 13-10-2018 Atc_m129 1ea530991e67604864c54849a694f3b8 622 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 552 613 1.2E-6 T 13-10-2018 IPR001357 BRCT domain Atc_m129 1ea530991e67604864c54849a694f3b8 622 Gene3D G3DSA:2.40.50.140 291 371 1.5E-17 T 13-10-2018 Atc_m129 1ea530991e67604864c54849a694f3b8 622 SUPERFAMILY SSF50249 292 362 3.43E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_m129 1ea530991e67604864c54849a694f3b8 622 Gene3D G3DSA:1.10.150.20 465 545 6.1E-13 T 13-10-2018 Atc_m129 1ea530991e67604864c54849a694f3b8 622 Gene3D G3DSA:3.30.1490.70 231 290 4.0E-5 T 13-10-2018 Atc_m129 1ea530991e67604864c54849a694f3b8 622 SUPERFAMILY SSF47781 371 541 6.67E-22 T 13-10-2018 IPR010994 RuvA domain 2-like Atc_m129 1ea530991e67604864c54849a694f3b8 622 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 25 155 1.9E-12 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Atc_m129 1ea530991e67604864c54849a694f3b8 622 Gene3D G3DSA:3.40.50.10190 548 621 2.9E-19 T 13-10-2018 IPR036420 BRCT domain superfamily Atc_m129 1ea530991e67604864c54849a694f3b8 622 SUPERFAMILY SSF52113 549 619 2.13E-12 T 13-10-2018 IPR036420 BRCT domain superfamily Atc_m129 1ea530991e67604864c54849a694f3b8 622 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 295 362 8.4E-18 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Atc_m129 1ea530991e67604864c54849a694f3b8 622 Pfam PF12826 Helix-hairpin-helix motif 471 530 1.2E-10 T 13-10-2018 Atc_m129 1ea530991e67604864c54849a694f3b8 622 PIRSF PIRSF001604 18 621 1.1E-92 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Atc_m129 1ea530991e67604864c54849a694f3b8 622 SUPERFAMILY SSF56091 20 284 8.63E-31 T 13-10-2018 Atc_2872 20862bd7751047d75366f8d77e853461 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atc_2872 20862bd7751047d75366f8d77e853461 448 SUPERFAMILY SSF52440 1 113 2.45E-48 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atc_2872 20862bd7751047d75366f8d77e853461 448 Gene3D G3DSA:3.30.470.130 1 448 2.0E-190 T 13-10-2018 Atc_2872 20862bd7751047d75366f8d77e853461 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.5E-45 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atc_2872 20862bd7751047d75366f8d77e853461 448 SMART SM00878 338 443 3.9E-65 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atc_2872 20862bd7751047d75366f8d77e853461 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 324 2.0E-80 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atc_2872 20862bd7751047d75366f8d77e853461 448 SUPERFAMILY SSF51246 333 446 3.56E-43 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atc_2872 20862bd7751047d75366f8d77e853461 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atc_2872 20862bd7751047d75366f8d77e853461 448 SUPERFAMILY SSF56059 83 347 2.3E-69 T 13-10-2018 Atc_2872 20862bd7751047d75366f8d77e853461 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 9.9E-217 T 13-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Atc_2872 20862bd7751047d75366f8d77e853461 448 Pfam PF02785 Biotin carboxylase C-terminal domain 338 443 1.2E-40 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atc_2665 213f05d85a4ca7d132f773c1de856816 424 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 377 5.2E-145 T 13-10-2018 IPR020823 Cell division protein FtsA Atc_2665 213f05d85a4ca7d132f773c1de856816 424 Pfam PF14450 Cell division protein FtsA 10 184 3.3E-12 T 13-10-2018 Atc_2665 213f05d85a4ca7d132f773c1de856816 424 PIRSF PIRSF003101 1 423 2.3E-156 T 13-10-2018 IPR020823 Cell division protein FtsA Atc_2665 213f05d85a4ca7d132f773c1de856816 424 SMART SM00842 9 195 3.7E-101 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Atc_2665 213f05d85a4ca7d132f773c1de856816 424 Gene3D G3DSA:3.30.420.40 12 370 2.4E-128 T 13-10-2018 Atc_2665 213f05d85a4ca7d132f773c1de856816 424 Gene3D G3DSA:3.90.640.10 234 299 2.4E-128 T 13-10-2018 Atc_2665 213f05d85a4ca7d132f773c1de856816 424 SUPERFAMILY SSF53067 198 377 1.43E-47 T 13-10-2018 Atc_2665 213f05d85a4ca7d132f773c1de856816 424 Gene3D G3DSA:3.30.420.40 196 351 2.4E-128 T 13-10-2018 Atc_2665 213f05d85a4ca7d132f773c1de856816 424 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 1.6E-32 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Atc_2665 213f05d85a4ca7d132f773c1de856816 424 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 423 31.551 T 13-10-2018 IPR020823 Cell division protein FtsA Atc_2665 213f05d85a4ca7d132f773c1de856816 424 SUPERFAMILY SSF53067 7 196 6.69E-60 T 13-10-2018 Atc_2665 213f05d85a4ca7d132f773c1de856816 424 Pfam PF14450 Cell division protein FtsA 206 373 3.8E-25 T 13-10-2018 Atc_2665 213f05d85a4ca7d132f773c1de856816 424 Gene3D G3DSA:3.30.1490.110 86 168 2.4E-128 T 13-10-2018 Atc_1347 8ec56c3dff34731b6ffde605294d1ea7 456 ProSitePatterns PS00216 Sugar transport proteins signature 1. 312 328 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atc_1347 8ec56c3dff34731b6ffde605294d1ea7 456 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atc_1347 8ec56c3dff34731b6ffde605294d1ea7 456 PRINTS PR00171 Sugar transporter signature 378 390 1.7E-5 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Atc_1347 8ec56c3dff34731b6ffde605294d1ea7 456 PRINTS PR00171 Sugar transporter signature 355 376 1.7E-5 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Atc_1347 8ec56c3dff34731b6ffde605294d1ea7 456 PRINTS PR00171 Sugar transporter signature 111 130 1.7E-5 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Atc_1347 8ec56c3dff34731b6ffde605294d1ea7 456 PRINTS PR00171 Sugar transporter signature 28 38 1.7E-5 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Atc_1347 8ec56c3dff34731b6ffde605294d1ea7 456 Pfam PF00083 Sugar (and other) transporter 27 446 1.6E-61 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atc_1347 8ec56c3dff34731b6ffde605294d1ea7 456 SUPERFAMILY SSF103473 9 449 1.96E-78 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_1347 8ec56c3dff34731b6ffde605294d1ea7 456 Gene3D G3DSA:1.20.1250.20 10 451 2.7E-98 T 13-10-2018 Atc_0014 6865f076f4b4f2d4996893a95d839cb6 348 Gene3D G3DSA:3.10.350.10 37 83 6.0E-13 T 13-10-2018 IPR036779 LysM domain superfamily Atc_0014 6865f076f4b4f2d4996893a95d839cb6 348 Pfam PF01476 LysM domain 38 84 3.8E-11 T 13-10-2018 IPR018392 LysM domain Atc_0014 6865f076f4b4f2d4996893a95d839cb6 348 SMART SM00257 37 85 7.2E-7 T 13-10-2018 IPR018392 LysM domain Atc_0014 6865f076f4b4f2d4996893a95d839cb6 348 SUPERFAMILY SSF54106 36 84 9.55E-8 T 13-10-2018 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 SUPERFAMILY SSF47794 351 416 1.05E-16 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 SUPERFAMILY SSF54814 282 345 7.85E-17 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 Gene3D G3DSA:3.30.300.20 201 279 6.2E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 SUPERFAMILY SSF47794 431 492 8.79E-13 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 SMART SM00316 136 202 3.5E-9 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 Gene3D G3DSA:3.30.300.20 281 349 1.9E-27 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 SUPERFAMILY SSF50249 136 201 2.8E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 Pfam PF13184 NusA-like KH domain 232 299 2.6E-27 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 30.167 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 SUPERFAMILY SSF54814 202 279 9.16E-30 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 344 4.5E-128 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 SUPERFAMILY SSF69705 1 129 7.72E-38 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 Gene3D G3DSA:2.40.50.140 138 200 3.2E-24 T 13-10-2018 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 Pfam PF08529 NusA N-terminal domain 4 127 3.8E-36 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 415 9.3E-20 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 Gene3D G3DSA:1.10.150.20 433 491 1.1E-17 T 13-10-2018 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 Gene3D G3DSA:3.30.1480.10 1 132 1.2E-40 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 SMART SM00322 303 367 7.6E-4 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 SMART SM00322 232 295 24.0 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 Gene3D G3DSA:1.10.150.20 356 423 1.1E-27 T 13-10-2018 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 Pfam PF14520 Helix-hairpin-helix domain 434 488 1.9E-7 T 13-10-2018 Atc_2465 0ac7efe50c7123e90ded20787b536f71 493 Pfam PF00575 S1 RNA binding domain 137 197 2.5E-7 T 13-10-2018 IPR003029 S1 domain GO:0003676 Atc_0262 c6308e82b6296e5716693dc179900d80 451 Gene3D G3DSA:3.40.50.2300 1 131 1.6E-35 T 13-10-2018 Atc_0262 c6308e82b6296e5716693dc179900d80 451 SUPERFAMILY SSF46689 352 440 1.03E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0262 c6308e82b6296e5716693dc179900d80 451 Gene3D G3DSA:1.10.10.60 390 442 2.2E-9 T 13-10-2018 Atc_0262 c6308e82b6296e5716693dc179900d80 451 SUPERFAMILY SSF52540 140 380 3.38E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0262 c6308e82b6296e5716693dc179900d80 451 Gene3D G3DSA:3.40.50.300 132 309 1.1E-64 T 13-10-2018 Atc_0262 c6308e82b6296e5716693dc179900d80 451 SMART SM00448 4 115 7.5E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0262 c6308e82b6296e5716693dc179900d80 451 Pfam PF00158 Sigma-54 interaction domain 140 305 1.1E-70 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_0262 c6308e82b6296e5716693dc179900d80 451 SUPERFAMILY SSF52172 1 183 1.32E-41 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0262 c6308e82b6296e5716693dc179900d80 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atc_0262 c6308e82b6296e5716693dc179900d80 451 SMART SM00382 159 302 3.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0262 c6308e82b6296e5716693dc179900d80 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_0262 c6308e82b6296e5716693dc179900d80 451 Gene3D G3DSA:1.10.8.60 310 388 4.1E-24 T 13-10-2018 Atc_0262 c6308e82b6296e5716693dc179900d80 451 Pfam PF00072 Response regulator receiver domain 6 115 2.4E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1459 a3e3cf9f1bf25e6887947215858fd7e0 226 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 89 224 4.2E-37 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Atc_1459 a3e3cf9f1bf25e6887947215858fd7e0 226 SUPERFAMILY SSF51269 101 162 6.67E-5 T 13-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 Atc_1459 a3e3cf9f1bf25e6887947215858fd7e0 226 Pfam PF13144 Chaperone for flagella basal body P-ring formation 25 224 1.8E-54 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Atc_1459 a3e3cf9f1bf25e6887947215858fd7e0 226 Gene3D G3DSA:2.30.30.760 168 225 1.1E-11 T 13-10-2018 Atc_1459 a3e3cf9f1bf25e6887947215858fd7e0 226 SMART SM00858 101 163 1.6E-9 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Atc_0883 8b11bd4a4ec424d6b025df8d3c3a9055 650 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 491 519 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Atc_0883 8b11bd4a4ec424d6b025df8d3c3a9055 650 SUPERFAMILY SSF53955 469 622 7.67E-38 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_0883 8b11bd4a4ec424d6b025df8d3c3a9055 650 Gene3D G3DSA:1.10.530.10 466 627 5.6E-40 T 13-10-2018 Atc_0883 8b11bd4a4ec424d6b025df8d3c3a9055 650 Pfam PF01464 Transglycosylase SLT domain 474 578 5.5E-22 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_0883 8b11bd4a4ec424d6b025df8d3c3a9055 650 Gene3D G3DSA:1.25.20.10 14 376 5.2E-42 T 13-10-2018 Atc_0883 8b11bd4a4ec424d6b025df8d3c3a9055 650 SUPERFAMILY SSF48435 16 463 1.26E-64 T 13-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 Atc_2157 b4216ae59fd6f68fa0c2db4195aff78f 304 SUPERFAMILY SSF48576 10 295 4.56E-76 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atc_2157 b4216ae59fd6f68fa0c2db4195aff78f 304 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Atc_2157 b4216ae59fd6f68fa0c2db4195aff78f 304 Gene3D G3DSA:1.10.600.10 9 304 9.9E-87 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atc_2157 b4216ae59fd6f68fa0c2db4195aff78f 304 Pfam PF00348 Polyprenyl synthetase 39 277 6.5E-48 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Atc_2157 b4216ae59fd6f68fa0c2db4195aff78f 304 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 88 104 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Atc_0071 f523fdce0433097cd5d3d5497497a399 665 SUPERFAMILY SSF52518 349 528 1.92E-66 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_0071 f523fdce0433097cd5d3d5497497a399 665 Gene3D G3DSA:3.40.50.970 4 327 1.6E-132 T 13-10-2018 Atc_0071 f523fdce0433097cd5d3d5497497a399 665 Pfam PF02779 Transketolase, pyrimidine binding domain 355 526 8.8E-48 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atc_0071 f523fdce0433097cd5d3d5497497a399 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 333 2.1E-160 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atc_0071 f523fdce0433097cd5d3d5497497a399 665 SUPERFAMILY SSF52518 7 329 6.16E-122 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_0071 f523fdce0433097cd5d3d5497497a399 665 Pfam PF02780 Transketolase, C-terminal domain 556 658 2.2E-14 T 13-10-2018 IPR033248 Transketolase, C-terminal domain Atc_0071 f523fdce0433097cd5d3d5497497a399 665 Gene3D G3DSA:3.40.50.920 540 663 2.8E-42 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atc_0071 f523fdce0433097cd5d3d5497497a399 665 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atc_0071 f523fdce0433097cd5d3d5497497a399 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 663 2.5E-295 T 13-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Atc_0071 f523fdce0433097cd5d3d5497497a399 665 SMART SM00861 356 528 6.4E-67 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atc_0071 f523fdce0433097cd5d3d5497497a399 665 SUPERFAMILY SSF52922 535 663 3.8E-41 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atc_0071 f523fdce0433097cd5d3d5497497a399 665 Gene3D G3DSA:3.40.50.970 331 538 3.3E-78 T 13-10-2018 Atc_0654 6a39b2ed8a0afc366649074448d73a91 281 Pfam PF02673 Bacitracin resistance protein BacA 8 269 5.3E-73 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Atc_0654 6a39b2ed8a0afc366649074448d73a91 281 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 275 15.403 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Atc_m005 96820af7e904a197fb5913e1dcc3f264 413 Gene3D G3DSA:2.30.40.10 20 65 6.0E-88 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atc_m005 96820af7e904a197fb5913e1dcc3f264 413 Pfam PF01979 Amidohydrolase family 62 388 4.3E-39 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atc_m005 96820af7e904a197fb5913e1dcc3f264 413 Gene3D G3DSA:3.20.20.140 66 373 6.0E-88 T 13-10-2018 Atc_m005 96820af7e904a197fb5913e1dcc3f264 413 SUPERFAMILY SSF51556 65 360 9.36E-65 T 13-10-2018 IPR032466 Metal-dependent hydrolase Atc_m005 96820af7e904a197fb5913e1dcc3f264 413 SUPERFAMILY SSF51338 8 78 3.28E-11 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atc_1744 a8e03e1fd7fa4a04f417ac9b52472888 130 PIRSF PIRSF000077 22 126 7.6E-28 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Atc_1744 a8e03e1fd7fa4a04f417ac9b52472888 130 TIGRFAM TIGR01068 thioredoxin: thioredoxin 32 125 7.0E-29 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Atc_1744 a8e03e1fd7fa4a04f417ac9b52472888 130 PRINTS PR00421 Thioredoxin family signature 43 51 1.8E-7 T 13-10-2018 Atc_1744 a8e03e1fd7fa4a04f417ac9b52472888 130 PRINTS PR00421 Thioredoxin family signature 91 102 1.8E-7 T 13-10-2018 Atc_1744 a8e03e1fd7fa4a04f417ac9b52472888 130 PRINTS PR00421 Thioredoxin family signature 51 60 1.8E-7 T 13-10-2018 Atc_1744 a8e03e1fd7fa4a04f417ac9b52472888 130 SUPERFAMILY SSF52833 11 125 4.55E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1744 a8e03e1fd7fa4a04f417ac9b52472888 130 ProSitePatterns PS00194 Thioredoxin family active site. 44 62 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Atc_1744 a8e03e1fd7fa4a04f417ac9b52472888 130 Gene3D G3DSA:2.20.28.140 1 21 6.1E-6 T 13-10-2018 Atc_1744 a8e03e1fd7fa4a04f417ac9b52472888 130 Pfam PF00085 Thioredoxin 26 125 7.5E-26 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Atc_1744 a8e03e1fd7fa4a04f417ac9b52472888 130 Gene3D G3DSA:3.40.30.10 22 128 4.4E-28 T 13-10-2018 Atc_2073 164a9d173ec052b9399b30c4cd7476fd 51 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 50 3.4E-17 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atc_2073 164a9d173ec052b9399b30c4cd7476fd 51 PIRSF PIRSF006156 1 51 2.1E-20 T 13-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin Atc_2073 164a9d173ec052b9399b30c4cd7476fd 51 SUPERFAMILY SSF143011 2 50 1.0E-15 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atc_2073 164a9d173ec052b9399b30c4cd7476fd 51 Gene3D G3DSA:3.30.2310.20 1 51 7.6E-23 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atc_2073 164a9d173ec052b9399b30c4cd7476fd 51 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 1 51 1.3E-22 T 13-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin Atc_2462 a2dc9d394fff40342977d58bbfc4e0b8 293 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 4 290 18.727 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2462 a2dc9d394fff40342977d58bbfc4e0b8 293 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 234 289 2.4E-16 T 13-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2462 a2dc9d394fff40342977d58bbfc4e0b8 293 SUPERFAMILY SSF88697 233 290 2.44E-11 T 13-10-2018 IPR015947 PUA-like superfamily Atc_2462 a2dc9d394fff40342977d58bbfc4e0b8 293 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 5 212 2.5E-77 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2462 a2dc9d394fff40342977d58bbfc4e0b8 293 Gene3D G3DSA:3.30.2350.10 2 234 2.4E-88 T 13-10-2018 Atc_2462 a2dc9d394fff40342977d58bbfc4e0b8 293 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 26 173 5.5E-55 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Atc_2462 a2dc9d394fff40342977d58bbfc4e0b8 293 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 174 230 5.9E-15 T 13-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Atc_2462 a2dc9d394fff40342977d58bbfc4e0b8 293 SUPERFAMILY SSF55120 4 215 2.62E-77 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2462 a2dc9d394fff40342977d58bbfc4e0b8 293 Gene3D G3DSA:2.30.130.10 235 292 3.8E-19 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Atc_0481 efd07a193dd97d6bf974af49076cb9ca 317 Gene3D G3DSA:1.10.443.10 111 298 1.6E-49 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_0481 efd07a193dd97d6bf974af49076cb9ca 317 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 304 48.49 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Atc_0481 efd07a193dd97d6bf974af49076cb9ca 317 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 88 5.0E-13 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Atc_0481 efd07a193dd97d6bf974af49076cb9ca 317 Pfam PF00589 Phage integrase family 140 289 1.9E-37 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_0481 efd07a193dd97d6bf974af49076cb9ca 317 SUPERFAMILY SSF47823 21 98 2.35E-10 T 13-10-2018 Atc_0481 efd07a193dd97d6bf974af49076cb9ca 317 SUPERFAMILY SSF56349 105 302 1.91E-45 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_0481 efd07a193dd97d6bf974af49076cb9ca 317 Gene3D G3DSA:1.10.150.130 1 108 1.9E-15 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_1018 a8f0547e1ac92ebb6a0da47a5dc54079 398 SUPERFAMILY SSF53901 198 396 9.26E-75 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Atc_1018 a8f0547e1ac92ebb6a0da47a5dc54079 398 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 139 155 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site Atc_1018 a8f0547e1ac92ebb6a0da47a5dc54079 398 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 239 353 1.0E-40 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Atc_1018 a8f0547e1ac92ebb6a0da47a5dc54079 398 PIRSF PIRSF000447 1 398 1.0E-177 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Atc_1018 a8f0547e1ac92ebb6a0da47a5dc54079 398 SUPERFAMILY SSF53901 2 236 1.1E-71 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Atc_1018 a8f0547e1ac92ebb6a0da47a5dc54079 398 Gene3D G3DSA:3.40.47.10 241 385 3.6E-57 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Atc_1018 a8f0547e1ac92ebb6a0da47a5dc54079 398 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 1 394 1.2E-190 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Atc_1018 a8f0547e1ac92ebb6a0da47a5dc54079 398 SMART SM00825 Beta-ketoacyl synthase 1 398 2.4E-18 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Atc_1018 a8f0547e1ac92ebb6a0da47a5dc54079 398 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 230 1.8E-55 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Atc_1018 a8f0547e1ac92ebb6a0da47a5dc54079 398 Gene3D G3DSA:3.40.47.10 1 239 7.9E-86 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Atc_0059 aa6baea50d5c51b9f2deca2b46d91cef 240 SUPERFAMILY SSF46894 130 230 1.19E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atc_0059 aa6baea50d5c51b9f2deca2b46d91cef 240 Gene3D G3DSA:3.40.50.2300 1 128 2.4E-39 T 13-10-2018 Atc_0059 aa6baea50d5c51b9f2deca2b46d91cef 240 SMART SM00862 153 229 2.7E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_0059 aa6baea50d5c51b9f2deca2b46d91cef 240 SMART SM00448 4 115 1.7E-42 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0059 aa6baea50d5c51b9f2deca2b46d91cef 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 2.5E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_0059 aa6baea50d5c51b9f2deca2b46d91cef 240 Pfam PF00072 Response regulator receiver domain 6 116 3.1E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0059 aa6baea50d5c51b9f2deca2b46d91cef 240 Gene3D G3DSA:1.10.10.10 129 235 7.4E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0059 aa6baea50d5c51b9f2deca2b46d91cef 240 SUPERFAMILY SSF52172 2 123 3.56E-43 T 13-10-2018 IPR011006 CheY-like superfamily Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 296 8.6E-35 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 SUPERFAMILY SSF51735 1 195 2.09E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 PIRSF PIRSF000124 1 440 4.0E-147 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 Gene3D G3DSA:3.40.50.720 1 202 6.0E-76 T 13-10-2018 Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 Gene3D G3DSA:1.20.5.100 204 234 1.5E-15 T 13-10-2018 Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 SUPERFAMILY SSF48179 205 301 1.5E-31 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 SUPERFAMILY SSF52413 314 435 4.19E-40 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 PIRSF PIRSF500134 1 441 4.4E-182 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 321 425 1.5E-33 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 Gene3D G3DSA:3.40.50.720 235 441 1.9E-79 T 13-10-2018 Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 SMART SM00984 321 425 7.4E-55 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 1.1E-61 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atc_2294 76b3ca55bcda20e677776b00d97a8528 441 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 421 2.5E-134 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 2.9E-35 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 2.9E-35 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 2.9E-35 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.9E-35 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 2.9E-35 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 Gene3D G3DSA:3.50.50.60 163 283 3.2E-86 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 2.7E-52 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 2.7E-52 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 48 63 2.7E-52 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 2.7E-52 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 157 2.7E-52 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 2.7E-52 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 2.7E-52 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 2.7E-52 T 13-10-2018 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 49 59 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 SUPERFAMILY SSF55424 353 463 7.22E-20 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 460 4.2E-15 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 16 333 7.0E-54 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 PIRSF PIRSF000350 4 441 8.0E-68 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 Gene3D G3DSA:3.50.50.60 15 341 3.2E-86 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2277 3e677a6506695d8e72d6c962639b2314 480 Gene3D G3DSA:3.30.390.30 354 470 4.3E-20 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_2277 3e677a6506695d8e72d6c962639b2314 480 SUPERFAMILY SSF51905 12 343 1.85E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1054 ccbb370311fd2bf538663f8cb1cbcf2a 266 Gene3D G3DSA:3.40.830.10 3 263 2.1E-66 T 13-10-2018 Atc_1054 ccbb370311fd2bf538663f8cb1cbcf2a 266 Pfam PF01875 Memo-like protein 6 258 4.3E-53 T 13-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 Atc_1054 ccbb370311fd2bf538663f8cb1cbcf2a 266 Hamap MF_00055 MEMO1 family protein . 3 262 49.067 T 13-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 Atc_1054 ccbb370311fd2bf538663f8cb1cbcf2a 266 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 5 260 5.7E-79 T 13-10-2018 Atc_0695 01cda2d4a448f48d4d2003bfa506c008 193 Gene3D G3DSA:3.40.50.1470 3 193 5.0E-64 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Atc_0695 01cda2d4a448f48d4d2003bfa506c008 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 6 189 2.1E-57 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Atc_0695 01cda2d4a448f48d4d2003bfa506c008 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 1.2E-51 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Atc_0695 01cda2d4a448f48d4d2003bfa506c008 193 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Atc_0695 01cda2d4a448f48d4d2003bfa506c008 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 32.797 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Atc_0695 01cda2d4a448f48d4d2003bfa506c008 193 SUPERFAMILY SSF53178 5 190 9.29E-63 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Atc_0200 d4c2ec189847e6801eadc2c9620e59a1 410 Gene3D G3DSA:3.30.450.20 4 116 4.7E-21 T 13-10-2018 Atc_0200 d4c2ec189847e6801eadc2c9620e59a1 410 SMART SM00283 121 311 7.0E-11 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atc_0200 d4c2ec189847e6801eadc2c9620e59a1 410 Gene3D G3DSA:1.10.287.950 117 312 2.2E-39 T 13-10-2018 Atc_0200 d4c2ec189847e6801eadc2c9620e59a1 410 SMART SM00091 9 79 0.0014 T 13-10-2018 IPR000014 PAS domain Atc_0200 d4c2ec189847e6801eadc2c9620e59a1 410 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 128 2.9E-14 T 13-10-2018 IPR000014 PAS domain Atc_0200 d4c2ec189847e6801eadc2c9620e59a1 410 Pfam PF13682 Chemoreceptor zinc-binding domain 328 372 1.9E-10 T 13-10-2018 IPR025991 Chemoreceptor zinc-binding domain Atc_0200 d4c2ec189847e6801eadc2c9620e59a1 410 Pfam PF13426 PAS domain 25 125 7.3E-13 T 13-10-2018 IPR000014 PAS domain Atc_0200 d4c2ec189847e6801eadc2c9620e59a1 410 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 139 295 6.6E-30 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atc_0200 d4c2ec189847e6801eadc2c9620e59a1 410 SUPERFAMILY SSF55785 23 123 1.92E-21 T 13-10-2018 IPR035965 PAS domain superfamily Atc_0200 d4c2ec189847e6801eadc2c9620e59a1 410 SUPERFAMILY SSF58104 110 295 3.66E-43 T 13-10-2018 Atc_0823 e947632c1060cd237c854061458bd705 267 Gene3D G3DSA:3.40.190.80 140 264 6.9E-41 T 13-10-2018 Atc_0823 e947632c1060cd237c854061458bd705 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 5.3E-28 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Atc_0823 e947632c1060cd237c854061458bd705 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 5.3E-28 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Atc_0823 e947632c1060cd237c854061458bd705 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 5.3E-28 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Atc_0823 e947632c1060cd237c854061458bd705 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 5.3E-28 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Atc_0823 e947632c1060cd237c854061458bd705 267 Pfam PF00459 Inositol monophosphatase family 2 259 6.7E-65 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0823 e947632c1060cd237c854061458bd705 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Atc_0823 e947632c1060cd237c854061458bd705 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Atc_0823 e947632c1060cd237c854061458bd705 267 SUPERFAMILY SSF56655 3 260 2.36E-85 T 13-10-2018 Atc_0823 e947632c1060cd237c854061458bd705 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 9.2E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0823 e947632c1060cd237c854061458bd705 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 9.2E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0823 e947632c1060cd237c854061458bd705 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 9.2E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0823 e947632c1060cd237c854061458bd705 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 9.2E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0823 e947632c1060cd237c854061458bd705 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 9.2E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0823 e947632c1060cd237c854061458bd705 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 9.2E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0823 e947632c1060cd237c854061458bd705 267 Gene3D G3DSA:3.30.540.10 1 139 3.3E-47 T 13-10-2018 Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 17 447 3.5E-173 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 Gene3D G3DSA:1.10.8.60 281 352 3.9E-23 T 13-10-2018 Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 SUPERFAMILY SSF52540 114 326 2.98E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 Gene3D G3DSA:1.10.1750.10 357 450 1.4E-35 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 ProSitePatterns PS01008 DnaA protein signature. 408 427 - T 13-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 14 449 32.353 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 Gene3D G3DSA:3.30.300.180 14 107 1.1E-17 T 13-10-2018 IPR038454 DnaA, N-terminal domain superfamily Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 SUPERFAMILY SSF48295 346 448 2.14E-35 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 Pfam PF11638 DnaA N-terminal domain 15 75 3.1E-13 T 13-10-2018 IPR024633 DnaA N-terminal domain Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 212 226 1.7E-51 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 246 273 1.7E-51 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 408 427 1.7E-51 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 180 194 1.7E-51 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 148 168 1.7E-51 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 Gene3D G3DSA:3.40.50.300 108 279 4.0E-51 T 13-10-2018 Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 Pfam PF00308 Bacterial dnaA protein 115 331 1.1E-93 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 SMART SM00382 147 360 2.4E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 SMART SM00760 358 427 1.9E-41 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Atc_0001 934b35292f215a7e9b124c58a4cbb87d 450 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 360 427 5.5E-31 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Atc_0479 03d54c350c03ee58124dbd063d38724b 441 SUPERFAMILY SSF52540 4 439 3.76E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0479 03d54c350c03ee58124dbd063d38724b 441 Gene3D G3DSA:1.10.8.60 333 438 1.1E-38 T 13-10-2018 Atc_0479 03d54c350c03ee58124dbd063d38724b 441 Pfam PF07724 AAA domain (Cdc48 subfamily) 167 327 1.3E-38 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atc_0479 03d54c350c03ee58124dbd063d38724b 441 SMART SM01086 333 432 3.2E-21 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Atc_0479 03d54c350c03ee58124dbd063d38724b 441 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 106 4.9E-7 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atc_0479 03d54c350c03ee58124dbd063d38724b 441 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 441 7.4E-201 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Atc_0479 03d54c350c03ee58124dbd063d38724b 441 SMART SM00382 49 330 7.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0479 03d54c350c03ee58124dbd063d38724b 441 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 441 42.995 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Atc_0479 03d54c350c03ee58124dbd063d38724b 441 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 333 404 5.1E-6 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Atc_2632 d3ab6a19310fb10c4f41a9eabc13bb5d 704 Pfam PF12867 DinB superfamily 30 161 2.1E-9 T 13-10-2018 IPR024775 DinB-like domain Atc_2632 d3ab6a19310fb10c4f41a9eabc13bb5d 704 Pfam PF08241 Methyltransferase domain 504 627 2.8E-11 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atc_2632 d3ab6a19310fb10c4f41a9eabc13bb5d 704 Pfam PF03781 Sulfatase-modifying factor enzyme 1 195 448 1.4E-28 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Atc_2632 d3ab6a19310fb10c4f41a9eabc13bb5d 704 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 459 701 7.5E-99 T 13-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain Atc_2632 d3ab6a19310fb10c4f41a9eabc13bb5d 704 Gene3D G3DSA:3.90.1580.10 180 458 4.8E-25 T 13-10-2018 Atc_2632 d3ab6a19310fb10c4f41a9eabc13bb5d 704 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 8 447 6.2E-206 T 13-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase Atc_2632 d3ab6a19310fb10c4f41a9eabc13bb5d 704 SUPERFAMILY SSF53335 472 666 1.44E-25 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2632 d3ab6a19310fb10c4f41a9eabc13bb5d 704 SUPERFAMILY SSF56436 193 450 1.27E-54 T 13-10-2018 IPR016187 C-type lectin fold Atc_2632 d3ab6a19310fb10c4f41a9eabc13bb5d 704 Gene3D G3DSA:3.40.50.150 464 664 1.9E-25 T 13-10-2018 Atc_m183 357d393d89585232aaf5d280c5d8013b 202 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 68 198 1.9E-20 T 13-10-2018 IPR000477 Reverse transcriptase domain Atc_m183 357d393d89585232aaf5d280c5d8013b 202 SUPERFAMILY SSF56672 16 195 2.56E-33 T 13-10-2018 Atc_0567 b575071d4afd3546781bbecf1016aef9 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 443 34.074 T 13-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Atc_0567 b575071d4afd3546781bbecf1016aef9 458 SMART SM00962 100 297 2.0E-111 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atc_0567 b575071d4afd3546781bbecf1016aef9 458 Pfam PF00448 SRP54-type protein, GTPase domain 100 297 1.9E-72 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atc_0567 b575071d4afd3546781bbecf1016aef9 458 Gene3D G3DSA:1.20.120.140 4 307 3.0E-124 T 13-10-2018 Atc_0567 b575071d4afd3546781bbecf1016aef9 458 SMART SM00963 1 86 8.1E-39 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atc_0567 b575071d4afd3546781bbecf1016aef9 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.5E-23 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atc_0567 b575071d4afd3546781bbecf1016aef9 458 SMART SM00382 99 247 4.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0567 b575071d4afd3546781bbecf1016aef9 458 Pfam PF02978 Signal peptide binding domain 330 428 9.1E-35 T 13-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Atc_0567 b575071d4afd3546781bbecf1016aef9 458 Gene3D G3DSA:1.10.260.30 329 447 2.1E-45 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Atc_0567 b575071d4afd3546781bbecf1016aef9 458 SUPERFAMILY SSF47446 299 433 9.55E-46 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Atc_0567 b575071d4afd3546781bbecf1016aef9 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 431 1.5E-181 T 13-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Atc_0567 b575071d4afd3546781bbecf1016aef9 458 SUPERFAMILY SSF52540 42 354 3.99E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0567 b575071d4afd3546781bbecf1016aef9 458 Gene3D G3DSA:3.40.50.300 90 286 3.0E-124 T 13-10-2018 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 532 5.5E-164 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 SUPERFAMILY SSF50249 577 679 4.41E-32 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 Gene3D G3DSA:2.20.28.20 139 173 8.9E-151 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 SUPERFAMILY SSF47323 386 540 2.62E-33 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 Pfam PF09334 tRNA synthetases class I (M) 5 392 1.1E-150 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 2.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 2.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 2.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 287 302 2.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 380 391 2.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 2.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 Pfam PF01588 Putative tRNA binding domain 584 677 1.4E-24 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 542 39.124 T 13-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 SUPERFAMILY SSF57770 139 172 1.44E-11 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 Gene3D G3DSA:1.10.730.10 385 523 4.2E-29 T 13-10-2018 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 SUPERFAMILY SSF52374 2 381 7.59E-103 T 13-10-2018 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 Gene3D G3DSA:3.40.50.620 5 379 8.9E-151 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 554 680 1.0E-39 T 13-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atc_0412 07406fd2f825c01e80dbfdb7cd172f1b 680 Gene3D G3DSA:2.40.50.140 568 680 3.5E-35 T 13-10-2018 Atc_0376 197d8492c42c2b0ef6c7b59958d6c15b 298 Pfam PF03668 P-loop ATPase protein family 7 292 4.9E-88 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Atc_0376 197d8492c42c2b0ef6c7b59958d6c15b 298 SUPERFAMILY SSF52540 7 162 1.77E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0376 197d8492c42c2b0ef6c7b59958d6c15b 298 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 5 293 38.081 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Atc_0376 197d8492c42c2b0ef6c7b59958d6c15b 298 PIRSF PIRSF005052 5 296 8.7E-101 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Atc_0376 197d8492c42c2b0ef6c7b59958d6c15b 298 Gene3D G3DSA:3.40.50.300 2 168 2.9E-5 T 13-10-2018 Atc_0977 4f82ff7079f16615940e551ee43b55e4 435 PRINTS PR00758 Arsenical pump membrane protein signature 371 396 1.2E-83 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atc_0977 4f82ff7079f16615940e551ee43b55e4 435 PRINTS PR00758 Arsenical pump membrane protein signature 176 199 1.2E-83 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atc_0977 4f82ff7079f16615940e551ee43b55e4 435 PRINTS PR00758 Arsenical pump membrane protein signature 283 307 1.2E-83 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atc_0977 4f82ff7079f16615940e551ee43b55e4 435 PRINTS PR00758 Arsenical pump membrane protein signature 404 428 1.2E-83 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atc_0977 4f82ff7079f16615940e551ee43b55e4 435 PRINTS PR00758 Arsenical pump membrane protein signature 100 124 1.2E-83 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atc_0977 4f82ff7079f16615940e551ee43b55e4 435 PRINTS PR00758 Arsenical pump membrane protein signature 143 167 1.2E-83 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atc_0977 4f82ff7079f16615940e551ee43b55e4 435 Pfam PF02040 Arsenical pump membrane protein 2 432 8.4E-142 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atc_0977 4f82ff7079f16615940e551ee43b55e4 435 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 1 432 1.6E-178 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 SUPERFAMILY SSF52343 932 1090 5.28E-5 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 SUPERFAMILY SSF51971 379 723 6.67E-20 T 13-10-2018 Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 Gene3D G3DSA:3.40.50.720 382 511 2.2E-9 T 13-10-2018 Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 Gene3D G3DSA:3.50.50.60 634 724 2.2E-6 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 381 584 2.9E-10 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 SUPERFAMILY SSF63380 838 935 9.08E-10 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 SUPERFAMILY SSF51905 380 848 2.07E-7 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 Gene3D G3DSA:3.50.50.60 450 563 2.2E-9 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 495 513 2.3E-7 T 13-10-2018 Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 549 567 2.3E-7 T 13-10-2018 Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 382 401 2.3E-7 T 13-10-2018 Atc_0005 f774e0fe0dc49bceba219e45d5d8a24b 1156 Gene3D G3DSA:2.40.30.10 835 935 5.1E-9 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 SUPERFAMILY SSF81660 307 438 9.16E-12 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 Pfam PF00702 haloacid dehalogenase-like hydrolase 294 529 6.6E-27 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 Pfam PF00122 E1-E2 ATPase 99 274 2.5E-46 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 68 474 2.3E-62 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 483 596 6.3E-28 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 Gene3D G3DSA:3.40.1110.10 309 428 1.5E-24 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 Gene3D G3DSA:1.20.1110.10 496 756 1.3E-44 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 Gene3D G3DSA:1.20.1110.10 188 308 4.7E-20 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 Pfam PF00690 Cation transporter/ATPase, N-terminus 8 51 1.5E-7 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 677 698 1.0E-13 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 399 417 1.0E-13 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 547 572 1.0E-13 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 Gene3D G3DSA:2.60.120.1500 97 187 3.6E-31 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 SUPERFAMILY SSF56784 293 612 4.85E-44 T 13-10-2018 IPR036412 HAD-like superfamily Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 Gene3D G3DSA:3.40.50.1000 429 482 2.9E-10 T 13-10-2018 IPR023214 HAD superfamily Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 TIGRFAM TIGR01647 ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 8 721 1.1E-205 T 13-10-2018 IPR006534 P-type ATPase, subfamily IIIA GO:0008553|GO:0016021|GO:0120029 KEGG: 00190+3.6.3.6 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 294 308 1.6E-38 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 1.6E-38 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 145 159 1.6E-38 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 428 439 1.6E-38 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 450 460 1.6E-38 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 1.6E-38 T 13-10-2018 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 296 302 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 SUPERFAMILY SSF81665 5 760 1.44E-65 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 SMART SM00831 2 61 4.3E-4 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Atc_2720 6220b74cd6f95f9c3972d37109afd277 763 SUPERFAMILY SSF81653 100 195 3.27E-29 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Atc_1329 f80b3517f8c3c8b9a562d967b98e74ee 508 PIRSF PIRSF001492 1 505 5.2E-175 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1329 f80b3517f8c3c8b9a562d967b98e74ee 508 Pfam PF01676 Metalloenzyme superfamily 6 490 2.5E-67 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Atc_1329 f80b3517f8c3c8b9a562d967b98e74ee 508 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 503 43.26 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1329 f80b3517f8c3c8b9a562d967b98e74ee 508 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 290 1.3E-62 T 13-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1329 f80b3517f8c3c8b9a562d967b98e74ee 508 Gene3D G3DSA:3.40.1450.10 78 303 8.1E-191 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1329 f80b3517f8c3c8b9a562d967b98e74ee 508 SUPERFAMILY SSF53649 5 502 1.7E-67 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Atc_1329 f80b3517f8c3c8b9a562d967b98e74ee 508 Gene3D G3DSA:3.40.720.10 6 502 8.1E-191 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atc_1329 f80b3517f8c3c8b9a562d967b98e74ee 508 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 502 3.6E-178 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1329 f80b3517f8c3c8b9a562d967b98e74ee 508 SUPERFAMILY SSF64158 78 300 2.62E-70 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_0461 ca438d6ba9070659d5e497d0a1fb6a48 282 SUPERFAMILY SSF55060 161 279 4.8E-27 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Atc_0461 ca438d6ba9070659d5e497d0a1fb6a48 282 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 1.2E-71 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Atc_0461 ca438d6ba9070659d5e497d0a1fb6a48 282 Gene3D G3DSA:3.30.230.10 3 158 2.1E-54 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atc_0461 ca438d6ba9070659d5e497d0a1fb6a48 282 PIRSF PIRSF010376 4 281 6.7E-82 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Atc_0461 ca438d6ba9070659d5e497d0a1fb6a48 282 Pfam PF08544 GHMP kinases C terminal 206 244 2.8E-5 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain Atc_0461 ca438d6ba9070659d5e497d0a1fb6a48 282 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 268 30.534 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Atc_0461 ca438d6ba9070659d5e497d0a1fb6a48 282 Gene3D G3DSA:3.30.70.890 162 281 6.0E-26 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Atc_0461 ca438d6ba9070659d5e497d0a1fb6a48 282 SUPERFAMILY SSF54211 5 156 1.29E-41 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_0461 ca438d6ba9070659d5e497d0a1fb6a48 282 Pfam PF00288 GHMP kinases N terminal domain 87 143 4.3E-9 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 SUPERFAMILY SSF53067 19 197 4.86E-52 T 13-10-2018 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 SUPERFAMILY SSF100920 386 539 2.62E-49 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 SUPERFAMILY SSF100934 507 618 1.02E-26 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 PRINTS PR00301 70kDa heat shock protein signature 20 33 5.6E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 PRINTS PR00301 70kDa heat shock protein signature 469 485 5.6E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 PRINTS PR00301 70kDa heat shock protein signature 333 349 5.6E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 PRINTS PR00301 70kDa heat shock protein signature 152 172 5.6E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 PRINTS PR00301 70kDa heat shock protein signature 48 60 5.6E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 PRINTS PR00301 70kDa heat shock protein signature 211 221 5.6E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 PRINTS PR00301 70kDa heat shock protein signature 364 384 5.6E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 PRINTS PR00301 70kDa heat shock protein signature 388 407 5.6E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 SUPERFAMILY SSF53067 201 380 1.5E-50 T 13-10-2018 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 618 3.2E-265 T 13-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 Gene3D G3DSA:3.90.640.10 238 315 2.2E-112 T 13-10-2018 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 Gene3D G3DSA:1.20.1270.10 524 618 2.1E-22 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 Gene3D G3DSA:3.30.420.40 22 378 2.2E-112 T 13-10-2018 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 619 41.252 T 13-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 Gene3D G3DSA:2.60.34.10 383 523 5.3E-49 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 Pfam PF00012 Hsp70 protein 21 603 1.2E-176 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 Gene3D G3DSA:3.30.420.40 194 365 2.2E-112 T 13-10-2018 Atc_0831 b4c9687147028afba3a9d1e3f0b1de26 621 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Atc_1080 73e134ce2c53eac4198f0297ad8d5fe1 344 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 321 6.6E-22 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_1080 73e134ce2c53eac4198f0297ad8d5fe1 344 SUPERFAMILY SSF111369 179 328 4.58E-11 T 13-10-2018 Atc_1080 73e134ce2c53eac4198f0297ad8d5fe1 344 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 57 77 9.8E-7 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atc_1080 73e134ce2c53eac4198f0297ad8d5fe1 344 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 317 332 9.8E-7 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atc_1080 73e134ce2c53eac4198f0297ad8d5fe1 344 Gene3D G3DSA:2.40.50.100 45 78 2.0E-10 T 13-10-2018 Atc_1080 73e134ce2c53eac4198f0297ad8d5fe1 344 Gene3D G3DSA:1.10.287.470 79 102 2.0E-10 T 13-10-2018 Atc_1080 73e134ce2c53eac4198f0297ad8d5fe1 344 SUPERFAMILY SSF111369 115 172 4.97E-6 T 13-10-2018 Atc_1080 73e134ce2c53eac4198f0297ad8d5fe1 344 Gene3D G3DSA:2.40.50.100 179 236 1.4E-8 T 13-10-2018 Atc_1080 73e134ce2c53eac4198f0297ad8d5fe1 344 Gene3D G3DSA:2.40.30.170 237 329 1.2E-17 T 13-10-2018 Atc_1080 73e134ce2c53eac4198f0297ad8d5fe1 344 Gene3D G3DSA:1.10.287.470 113 175 4.5E-10 T 13-10-2018 Atc_1080 73e134ce2c53eac4198f0297ad8d5fe1 344 SUPERFAMILY SSF111369 52 103 1.83E-6 T 13-10-2018 Atc_0682 fe5f650d452ef958907d3695181855e9 270 Gene3D G3DSA:2.170.130.10 59 178 2.7E-9 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atc_0682 fe5f650d452ef958907d3695181855e9 270 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 173 3.4E-9 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Atc_0682 fe5f650d452ef958907d3695181855e9 270 SUPERFAMILY SSF56935 66 255 1.37E-18 T 13-10-2018 Atc_1353 40aff055088290c837772f7823e944e2 799 Gene3D G3DSA:2.40.170.20 217 799 2.6E-45 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atc_1353 40aff055088290c837772f7823e944e2 799 SUPERFAMILY SSF56935 79 799 4.03E-62 T 13-10-2018 Atc_1353 40aff055088290c837772f7823e944e2 799 Pfam PF00593 TonB dependent receptor 327 796 1.9E-28 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atc_1353 40aff055088290c837772f7823e944e2 799 Gene3D G3DSA:2.170.130.10 76 209 1.0E-5 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 158 1.3E-42 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 SUPERFAMILY SSF51735 6 160 1.66E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 116 141 2.0E-36 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 63 92 2.0E-36 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 238 265 2.0E-36 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 2.0E-36 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 162 190 2.0E-36 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 SMART SM01350 173 305 2.4E-6 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 173 284 5.9E-24 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 Gene3D G3DSA:1.10.1040.10 172 304 3.6E-49 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 Gene3D G3DSA:3.40.50.720 1 171 2.8E-54 T 13-10-2018 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 PIRSF PIRSF000103 1 300 3.5E-35 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 6 305 1.1E-108 T 13-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 Atc_0953 3d9ef80a1a97d65378c1a5249f3f84e7 306 SUPERFAMILY SSF48179 171 304 2.52E-39 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atc_0604 8a6c8f33351eff95ba07b0e2f068dc9f 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 4 103 26.848 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0604 8a6c8f33351eff95ba07b0e2f068dc9f 103 Pfam PF00338 Ribosomal protein S10p/S20e 8 102 3.0E-36 T 13-10-2018 IPR027486 Ribosomal protein S10 domain Atc_0604 8a6c8f33351eff95ba07b0e2f068dc9f 103 Gene3D G3DSA:3.30.70.600 2 103 1.1E-37 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Atc_0604 8a6c8f33351eff95ba07b0e2f068dc9f 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 30 45 - T 13-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0604 8a6c8f33351eff95ba07b0e2f068dc9f 103 PRINTS PR00971 Ribosomal protein S10 family signature 62 76 4.1E-20 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0604 8a6c8f33351eff95ba07b0e2f068dc9f 103 PRINTS PR00971 Ribosomal protein S10 family signature 41 56 4.1E-20 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0604 8a6c8f33351eff95ba07b0e2f068dc9f 103 PRINTS PR00971 Ribosomal protein S10 family signature 6 19 4.1E-20 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0604 8a6c8f33351eff95ba07b0e2f068dc9f 103 SUPERFAMILY SSF54999 6 103 1.57E-38 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Atc_0604 8a6c8f33351eff95ba07b0e2f068dc9f 103 SMART SM01403 8 102 1.6E-56 T 13-10-2018 IPR027486 Ribosomal protein S10 domain Atc_0604 8a6c8f33351eff95ba07b0e2f068dc9f 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 6 102 1.7E-44 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 SMART SM00493 1 129 8.6E-18 T 13-10-2018 IPR006171 TOPRIM domain Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 Pfam PF01131 DNA topoisomerase 155 581 5.4E-116 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 SUPERFAMILY SSF56712 1 590 8.5E-166 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 634 2.4E-184 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 SMART SM00436 129 221 4.1E-32 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 Gene3D G3DSA:2.70.20.10 215 478 2.2E-144 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 1.7E-24 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 511 525 1.7E-24 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 103 116 1.7E-24 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 392 408 1.7E-24 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 1.7E-24 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 Gene3D G3DSA:1.10.290.10 281 406 2.2E-144 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 SMART SM00437 272 548 4.8E-68 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 Pfam PF01751 Toprim domain 1 134 1.0E-15 T 13-10-2018 IPR006171 TOPRIM domain Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 Gene3D G3DSA:3.40.50.140 1 157 1.3E-51 T 13-10-2018 Atc_0168 80660db0cc41bbf2efeebccfa34e88f6 672 Gene3D G3DSA:1.10.460.10 163 588 2.2E-144 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Atc_0450 5d10bef048739bfc537966a2b1e7cdaa 391 SUPERFAMILY SSF69189 278 374 8.63E-9 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_0450 5d10bef048739bfc537966a2b1e7cdaa 391 SUPERFAMILY SSF56601 46 285 1.39E-55 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_0450 5d10bef048739bfc537966a2b1e7cdaa 391 Gene3D G3DSA:3.40.710.10 39 284 7.5E-67 T 13-10-2018 Atc_0450 5d10bef048739bfc537966a2b1e7cdaa 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 286 375 2.4E-7 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_0450 5d10bef048739bfc537966a2b1e7cdaa 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 49 266 9.4E-51 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Atc_0450 5d10bef048739bfc537966a2b1e7cdaa 391 SMART SM00936 286 376 5.2E-7 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_0450 5d10bef048739bfc537966a2b1e7cdaa 391 Gene3D G3DSA:2.60.410.10 286 375 6.4E-10 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_0450 5d10bef048739bfc537966a2b1e7cdaa 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 127 144 5.6E-13 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_0450 5d10bef048739bfc537966a2b1e7cdaa 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 154 167 5.6E-13 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_0450 5d10bef048739bfc537966a2b1e7cdaa 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 74 85 5.6E-13 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_2604 27be573674e6776fe8f72c16ab0636d4 376 SUPERFAMILY SSF52540 4 338 2.21E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2604 27be573674e6776fe8f72c16ab0636d4 376 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 4 345 1.1E-132 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Atc_2604 27be573674e6776fe8f72c16ab0636d4 376 Gene3D G3DSA:3.30.450.90 1 101 3.4E-30 T 13-10-2018 Atc_2604 27be573674e6776fe8f72c16ab0636d4 376 Pfam PF00437 Type II/IV secretion system protein 114 250 4.6E-34 T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_2604 27be573674e6776fe8f72c16ab0636d4 376 Gene3D G3DSA:3.40.50.300 102 356 2.4E-87 T 13-10-2018 Atc_1074 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1074 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1074 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_2033 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_2033 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_2033 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_2055 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_2055 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_2055 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1032 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1032 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1032 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_2030 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_2030 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_2030 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_2064 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_2064 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_2064 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1842 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1842 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1842 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0510 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_0510 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0510 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0681 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_0681 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0681 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1563 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1563 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1563 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0190 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_0190 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0190 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1944 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1944 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1944 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1553 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1553 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1553 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0211 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_0211 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0211 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0995 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_0995 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0995 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_2006 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_2006 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_2006 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1931 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1931 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1931 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_m190 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_m190 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_m190 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0494 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_0494 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0494 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0173 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_0173 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0173 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0777 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_0777 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0777 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_m102 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_m102 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_m102 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_3p18 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_3p18 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_3p18 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_m071 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_m071 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_m071 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_m209 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_m209 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_m209 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1473 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1473 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1473 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_2134 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_2134 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_2134 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_2100 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_2100 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_2100 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_m085 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_m085 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_m085 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0507 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_0507 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0507 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1112 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1112 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1112 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_2113 cd828d7cff72e414420d4135f0981598 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_2113 cd828d7cff72e414420d4135f0981598 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_2113 cd828d7cff72e414420d4135f0981598 404 Pfam PF01610 Transposase 156 390 1.2E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1144 165b7b12a3e7e20851d93b0c3c077193 164 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 11 113 1.6E-17 T 13-10-2018 IPR032758 Antitoxin MqsA/HigA-2 Atc_1144 165b7b12a3e7e20851d93b0c3c077193 164 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 5 114 1.6E-32 T 13-10-2018 IPR022452 Antitoxin MqsA Atc_1144 165b7b12a3e7e20851d93b0c3c077193 164 SUPERFAMILY SSF47413 57 118 7.04E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_1144 165b7b12a3e7e20851d93b0c3c077193 164 Gene3D G3DSA:1.10.260.40 4 117 3.1E-29 T 13-10-2018 Atc_0202 0de1b5f1c2884a38db0e37f1ebeb9e82 387 Gene3D G3DSA:1.10.150.130 55 168 1.5E-9 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_0202 0de1b5f1c2884a38db0e37f1ebeb9e82 387 Gene3D G3DSA:1.10.443.10 171 339 8.6E-33 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_0202 0de1b5f1c2884a38db0e37f1ebeb9e82 387 SUPERFAMILY SSF56349 61 335 1.47E-55 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_0202 0de1b5f1c2884a38db0e37f1ebeb9e82 387 Pfam PF00589 Phage integrase family 173 328 4.6E-28 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_2592 91a624957d93a1afe543440bf32b0dbe 554 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 67 228 4.3E-18 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Atc_0285 f578840ca9283362cd35b45aace20a3c 588 Pfam PF03814 Potassium-transporting ATPase A subunit 11 575 7.6E-221 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atc_0285 f578840ca9283362cd35b45aace20a3c 588 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 577 32.861 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atc_0285 f578840ca9283362cd35b45aace20a3c 588 PIRSF PIRSF001294 1 579 6.2E-216 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atc_0285 f578840ca9283362cd35b45aace20a3c 588 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 5 577 8.6E-204 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atc_2718 fc3a4a7d6c196b293422e16d0709deb5 130 PIRSF PIRSF006246 2 127 1.6E-45 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Atc_2718 fc3a4a7d6c196b293422e16d0709deb5 130 Gene3D G3DSA:2.40.40.20 2 125 1.9E-48 T 13-10-2018 Atc_2718 fc3a4a7d6c196b293422e16d0709deb5 130 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 4 119 1.8E-43 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Atc_2718 fc3a4a7d6c196b293422e16d0709deb5 130 Pfam PF02261 Aspartate decarboxylase 3 114 1.1E-45 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Atc_2718 fc3a4a7d6c196b293422e16d0709deb5 130 SUPERFAMILY SSF50692 3 116 1.24E-44 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atc_2718 fc3a4a7d6c196b293422e16d0709deb5 130 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 6 117 9.0E-34 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Atc_2718 fc3a4a7d6c196b293422e16d0709deb5 130 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 128 60.696 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Atc_1402 7016787298272a27e602058d2e116d91 427 SMART SM00382 114 335 9.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1402 7016787298272a27e602058d2e116d91 427 Pfam PF06689 ClpX C4-type zinc finger 13 49 4.9E-20 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Atc_1402 7016787298272a27e602058d2e116d91 427 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 3 417 53.361 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Atc_1402 7016787298272a27e602058d2e116d91 427 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 313 1.5E-49 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atc_1402 7016787298272a27e602058d2e116d91 427 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 11 413 4.1E-204 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Atc_1402 7016787298272a27e602058d2e116d91 427 SUPERFAMILY SSF52540 63 403 7.34E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1402 7016787298272a27e602058d2e116d91 427 Gene3D G3DSA:3.30.50.30 3 52 8.2E-24 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Atc_1402 7016787298272a27e602058d2e116d91 427 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 391 3.4E-16 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Atc_1402 7016787298272a27e602058d2e116d91 427 SMART SM00994 12 51 3.3E-24 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Atc_1402 7016787298272a27e602058d2e116d91 427 Gene3D G3DSA:1.10.8.60 318 425 8.6E-41 T 13-10-2018 Atc_1402 7016787298272a27e602058d2e116d91 427 Gene3D G3DSA:3.40.50.300 58 317 1.9E-108 T 13-10-2018 Atc_1402 7016787298272a27e602058d2e116d91 427 SUPERFAMILY SSF57716 13 48 1.07E-11 T 13-10-2018 Atc_1402 7016787298272a27e602058d2e116d91 427 SMART SM01086 319 413 7.7E-38 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Atc_2175 02a88e3b94b55ecb125ee871cd24926c 816 SUPERFAMILY SSF48452 534 591 3.56E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2175 02a88e3b94b55ecb125ee871cd24926c 816 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 177 244 3.1E-19 T 13-10-2018 IPR020012 Motility protein FimV, N-terminal Atc_2175 02a88e3b94b55ecb125ee871cd24926c 816 Gene3D G3DSA:1.20.58.2200 756 816 2.0E-20 T 13-10-2018 IPR038440 FimV, C-terminal domain superfamily Atc_2175 02a88e3b94b55ecb125ee871cd24926c 816 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 773 816 6.8E-20 T 13-10-2018 IPR020011 Motility protein FimV, C-terminal Atc_2175 02a88e3b94b55ecb125ee871cd24926c 816 Gene3D G3DSA:1.25.40.10 531 606 2.5E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 Pfam PF13188 PAS domain 67 124 3.9E-5 T 13-10-2018 IPR000014 PAS domain Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 SMART SM00388 174 239 2.7E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 SUPERFAMILY SSF55874 245 383 1.18E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 288 383 2.5E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 Gene3D G3DSA:3.30.565.10 243 390 1.5E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 Pfam PF00512 His Kinase A (phospho-acceptor) domain 175 235 4.2E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 SMART SM00387 281 386 6.2E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 SUPERFAMILY SSF47384 160 236 1.65E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 Gene3D G3DSA:1.10.287.130 160 236 6.6E-9 T 13-10-2018 Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 383 1.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 365 1.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 332 1.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 346 1.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1481 43234bef56ed6c45bdf1d2abee4447e1 401 SUPERFAMILY SSF55785 66 151 6.51E-7 T 13-10-2018 IPR035965 PAS domain superfamily Atc_2722 f55fc6c75d7c62472bc10d1c92e46752 484 SUPERFAMILY SSF53067 255 477 9.93E-34 T 13-10-2018 Atc_2722 f55fc6c75d7c62472bc10d1c92e46752 484 SUPERFAMILY SSF53067 10 251 1.3E-44 T 13-10-2018 Atc_2722 f55fc6c75d7c62472bc10d1c92e46752 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 439 1.3E-24 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Atc_2722 f55fc6c75d7c62472bc10d1c92e46752 484 Gene3D G3DSA:3.30.420.40 253 484 1.1E-45 T 13-10-2018 Atc_2722 f55fc6c75d7c62472bc10d1c92e46752 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 10 214 3.8E-39 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Atc_2722 f55fc6c75d7c62472bc10d1c92e46752 484 PIRSF PIRSF000538 7 484 3.7E-69 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Atc_2722 f55fc6c75d7c62472bc10d1c92e46752 484 Gene3D G3DSA:3.30.420.40 8 250 1.9E-51 T 13-10-2018 Atc_0282 2cb24280480f8e09ad6b6577c038d203 606 Gene3D G3DSA:3.30.70.1450 321 399 2.4E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atc_0282 2cb24280480f8e09ad6b6577c038d203 606 Gene3D G3DSA:3.30.70.1450 233 308 6.6E-8 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atc_0282 2cb24280480f8e09ad6b6577c038d203 606 Pfam PF02080 TrkA-C domain 235 294 5.3E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Atc_0282 2cb24280480f8e09ad6b6577c038d203 606 Pfam PF02080 TrkA-C domain 326 395 4.4E-11 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Atc_0282 2cb24280480f8e09ad6b6577c038d203 606 Pfam PF03600 Citrate transporter 29 212 2.8E-27 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Atc_0282 2cb24280480f8e09ad6b6577c038d203 606 SUPERFAMILY SSF116726 315 398 4.19E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atc_0282 2cb24280480f8e09ad6b6577c038d203 606 Pfam PF00939 Sodium:sulfate symporter transmembrane region 420 595 4.5E-9 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Atc_0282 2cb24280480f8e09ad6b6577c038d203 606 SUPERFAMILY SSF116726 229 301 5.62E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atc_1698 1fa453d6e2dddbbce3aecbb41523e38a 229 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 195 1.8E-25 T 13-10-2018 Atc_1698 1fa453d6e2dddbbce3aecbb41523e38a 229 SUPERFAMILY SSF56784 2 216 6.37E-35 T 13-10-2018 IPR036412 HAD-like superfamily Atc_1698 1fa453d6e2dddbbce3aecbb41523e38a 229 Gene3D G3DSA:3.40.50.1000 3 219 8.0E-75 T 13-10-2018 IPR023214 HAD superfamily Atc_1698 1fa453d6e2dddbbce3aecbb41523e38a 229 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 206 8.7E-41 T 13-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Atc_1698 1fa453d6e2dddbbce3aecbb41523e38a 229 Gene3D G3DSA:1.20.1440.100 15 88 8.0E-75 T 13-10-2018 Atc_1698 1fa453d6e2dddbbce3aecbb41523e38a 229 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 193 2.7E-40 T 13-10-2018 Atc_1070 fed4eb2ab7329150c80103fa37b0cafa 198 SUPERFAMILY SSF88946 12 96 1.26E-16 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atc_1070 fed4eb2ab7329150c80103fa37b0cafa 198 Pfam PF08281 Sigma-70, region 4 130 182 1.5E-7 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_1070 fed4eb2ab7329150c80103fa37b0cafa 198 Pfam PF04542 Sigma-70 region 2 24 82 3.8E-12 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atc_1070 fed4eb2ab7329150c80103fa37b0cafa 198 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 3.7E-17 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atc_1070 fed4eb2ab7329150c80103fa37b0cafa 198 Gene3D G3DSA:1.10.10.10 115 190 1.3E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1070 fed4eb2ab7329150c80103fa37b0cafa 198 Gene3D G3DSA:1.10.1740.10 4 78 6.4E-15 T 13-10-2018 Atc_1070 fed4eb2ab7329150c80103fa37b0cafa 198 SUPERFAMILY SSF88659 124 188 2.4E-9 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 SMART SM00388 250 318 1.2E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 SMART SM00387 362 474 1.7E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 SUPERFAMILY SSF55874 307 475 1.57E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 Gene3D G3DSA:3.30.565.10 323 479 6.3E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 SMART SM00304 197 249 2.7E-4 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 472 1.6E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 Gene3D G3DSA:1.20.1480.50 157 248 3.3E-6 T 13-10-2018 Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 Gene3D G3DSA:1.10.287.130 249 317 1.7E-15 T 13-10-2018 Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 SUPERFAMILY SSF158472 198 246 3.27E-5 T 13-10-2018 Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 4.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 4.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 4.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 316 3.8E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0264 f975bae37e599a0f5e19952bcb5f208b 499 SUPERFAMILY SSF47384 235 315 3.92E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_2721 8c0d2c78aa127a4cee5ecb1282807124 302 SUPERFAMILY SSF63829 7 294 4.09E-57 T 13-10-2018 Atc_2721 8c0d2c78aa127a4cee5ecb1282807124 302 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 24 267 9.2E-69 T 13-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region Atc_2721 8c0d2c78aa127a4cee5ecb1282807124 302 Gene3D G3DSA:2.120.10.30 11 297 6.9E-83 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atc_2721 8c0d2c78aa127a4cee5ecb1282807124 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 25 42 2.7E-34 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atc_2721 8c0d2c78aa127a4cee5ecb1282807124 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 249 267 2.7E-34 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atc_2721 8c0d2c78aa127a4cee5ecb1282807124 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 105 126 2.7E-34 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atc_2721 8c0d2c78aa127a4cee5ecb1282807124 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 168 188 2.7E-34 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atc_2721 8c0d2c78aa127a4cee5ecb1282807124 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 207 224 2.7E-34 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atc_2721 8c0d2c78aa127a4cee5ecb1282807124 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 145 167 2.7E-34 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atc_0697 d769d6050e96df4d3c43976bbcc3b72c 647 SUPERFAMILY SSF56601 248 597 5.99E-92 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_0697 d769d6050e96df4d3c43976bbcc3b72c 647 Gene3D G3DSA:3.40.710.10 240 608 2.2E-91 T 13-10-2018 Atc_0697 d769d6050e96df4d3c43976bbcc3b72c 647 Gene3D G3DSA:3.90.1310.10 60 239 4.1E-43 T 13-10-2018 Atc_0697 d769d6050e96df4d3c43976bbcc3b72c 647 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 230 2.6E-42 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Atc_0697 d769d6050e96df4d3c43976bbcc3b72c 647 SUPERFAMILY SSF56519 52 243 8.5E-46 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Atc_0697 d769d6050e96df4d3c43976bbcc3b72c 647 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 16 597 8.4E-189 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_0697 d769d6050e96df4d3c43976bbcc3b72c 647 Gene3D G3DSA:3.30.1390.30 81 156 4.1E-43 T 13-10-2018 Atc_0697 d769d6050e96df4d3c43976bbcc3b72c 647 Pfam PF00905 Penicillin binding protein transpeptidase domain 265 581 1.5E-67 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atc_0629 b012183c07c5cb3b328775d73fd02f38 132 ProSitePatterns PS00054 Ribosomal protein S11 signature. 100 122 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site Atc_0629 b012183c07c5cb3b328775d73fd02f38 132 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 13 129 6.0E-56 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0629 b012183c07c5cb3b328775d73fd02f38 132 PIRSF PIRSF002131 1 132 1.6E-52 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Atc_0629 b012183c07c5cb3b328775d73fd02f38 132 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 132 33.121 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Atc_0629 b012183c07c5cb3b328775d73fd02f38 132 Pfam PF00411 Ribosomal protein S11 22 131 6.4E-51 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Atc_0629 b012183c07c5cb3b328775d73fd02f38 132 SUPERFAMILY SSF53137 16 132 6.8E-48 T 13-10-2018 Atc_0629 b012183c07c5cb3b328775d73fd02f38 132 Gene3D G3DSA:3.30.420.80 4 132 7.1E-55 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Atc_1881 3866cd3c279265c699da167f07dcfff4 89 Gene3D G3DSA:1.20.58.1000 2 87 9.3E-29 T 13-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Atc_1881 3866cd3c279265c699da167f07dcfff4 89 Pfam PF02583 Metal-sensitive transcriptional repressor 6 82 2.2E-26 T 13-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Atc_0149 3866cd3c279265c699da167f07dcfff4 89 Gene3D G3DSA:1.20.58.1000 2 87 9.3E-29 T 13-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Atc_0149 3866cd3c279265c699da167f07dcfff4 89 Pfam PF02583 Metal-sensitive transcriptional repressor 6 82 2.2E-26 T 13-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Atc_1687 b9514496bbc8e7f8751a9c0545f82ec9 337 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 336 24.611 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Atc_1687 b9514496bbc8e7f8751a9c0545f82ec9 337 Pfam PF02769 AIR synthase related protein, C-terminal domain 196 312 1.2E-10 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Atc_1687 b9514496bbc8e7f8751a9c0545f82ec9 337 SUPERFAMILY SSF56042 146 312 6.28E-28 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atc_1687 b9514496bbc8e7f8751a9c0545f82ec9 337 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 140 6.9E-21 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Atc_1687 b9514496bbc8e7f8751a9c0545f82ec9 337 PIRSF PIRSF005303 1 334 1.4E-73 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Atc_1687 b9514496bbc8e7f8751a9c0545f82ec9 337 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 335 6.0E-81 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Atc_1687 b9514496bbc8e7f8751a9c0545f82ec9 337 Gene3D G3DSA:3.30.1330.10 2 145 8.0E-35 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atc_1687 b9514496bbc8e7f8751a9c0545f82ec9 337 SUPERFAMILY SSF55326 5 141 3.31E-28 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atc_1687 b9514496bbc8e7f8751a9c0545f82ec9 337 Gene3D G3DSA:3.90.650.10 149 336 2.7E-38 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atc_1908 d31964445c57bf89c3a643c4e0e4686e 621 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 204 411 2.7E-20 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Atc_1908 d31964445c57bf89c3a643c4e0e4686e 621 Pfam PF11412 Disulphide bond corrector protein DsbC 29 146 2.9E-24 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Atc_1908 d31964445c57bf89c3a643c4e0e4686e 621 Pfam PF13899 Thioredoxin-like 514 589 3.5E-9 T 13-10-2018 Atc_1908 d31964445c57bf89c3a643c4e0e4686e 621 SUPERFAMILY SSF52833 499 611 1.33E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1908 d31964445c57bf89c3a643c4e0e4686e 621 Gene3D G3DSA:2.60.40.1250 23 161 8.4E-29 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Atc_1908 d31964445c57bf89c3a643c4e0e4686e 621 Gene3D G3DSA:3.40.30.10 493 614 7.5E-28 T 13-10-2018 Atc_1908 d31964445c57bf89c3a643c4e0e4686e 621 SUPERFAMILY SSF74863 27 145 4.58E-22 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Atc_0545 d31964445c57bf89c3a643c4e0e4686e 621 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 204 411 2.7E-20 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Atc_0545 d31964445c57bf89c3a643c4e0e4686e 621 Pfam PF11412 Disulphide bond corrector protein DsbC 29 146 2.9E-24 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Atc_0545 d31964445c57bf89c3a643c4e0e4686e 621 Pfam PF13899 Thioredoxin-like 514 589 3.5E-9 T 13-10-2018 Atc_0545 d31964445c57bf89c3a643c4e0e4686e 621 SUPERFAMILY SSF52833 499 611 1.33E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0545 d31964445c57bf89c3a643c4e0e4686e 621 Gene3D G3DSA:2.60.40.1250 23 161 8.4E-29 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Atc_0545 d31964445c57bf89c3a643c4e0e4686e 621 Gene3D G3DSA:3.40.30.10 493 614 7.5E-28 T 13-10-2018 Atc_0545 d31964445c57bf89c3a643c4e0e4686e 621 SUPERFAMILY SSF74863 27 145 4.58E-22 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Atc_1480 e9e9b824afc51977ec75daacf097585f 325 SMART SM00382 14 159 7.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1480 e9e9b824afc51977ec75daacf097585f 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 284 301 9.9E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_1480 e9e9b824afc51977ec75daacf097585f 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 301 321 9.9E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_1480 e9e9b824afc51977ec75daacf097585f 325 Gene3D G3DSA:1.10.10.60 272 321 6.2E-12 T 13-10-2018 Atc_1480 e9e9b824afc51977ec75daacf097585f 325 Gene3D G3DSA:1.10.8.60 167 243 1.3E-21 T 13-10-2018 Atc_1480 e9e9b824afc51977ec75daacf097585f 325 SUPERFAMILY SSF46689 208 320 3.41E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_1480 e9e9b824afc51977ec75daacf097585f 325 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 208 217 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_1480 e9e9b824afc51977ec75daacf097585f 325 SUPERFAMILY SSF52540 1 238 3.19E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1480 e9e9b824afc51977ec75daacf097585f 325 Gene3D G3DSA:3.40.50.300 1 166 1.3E-62 T 13-10-2018 Atc_1480 e9e9b824afc51977ec75daacf097585f 325 Pfam PF02954 Bacterial regulatory protein, Fis family 278 318 8.2E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_1480 e9e9b824afc51977ec75daacf097585f 325 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 81 96 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atc_1480 e9e9b824afc51977ec75daacf097585f 325 Pfam PF00158 Sigma-54 interaction domain 1 161 2.7E-68 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_0015 0a82fec8f446f4120dca56eafa2c2b2f 311 Pfam PF00551 Formyl transferase 6 183 9.7E-44 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atc_0015 0a82fec8f446f4120dca56eafa2c2b2f 311 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atc_0015 0a82fec8f446f4120dca56eafa2c2b2f 311 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 9.0E-23 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atc_0015 0a82fec8f446f4120dca56eafa2c2b2f 311 Gene3D G3DSA:3.40.50.170 1 209 1.2E-76 T 13-10-2018 Atc_0015 0a82fec8f446f4120dca56eafa2c2b2f 311 Gene3D G3DSA:3.10.25.10 210 310 2.5E-25 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atc_0015 0a82fec8f446f4120dca56eafa2c2b2f 311 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 6 308 2.1E-84 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Atc_0015 0a82fec8f446f4120dca56eafa2c2b2f 311 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 305 34.693 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Atc_0015 0a82fec8f446f4120dca56eafa2c2b2f 311 SUPERFAMILY SSF50486 208 310 1.96E-28 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Atc_0015 0a82fec8f446f4120dca56eafa2c2b2f 311 SUPERFAMILY SSF53328 6 209 3.14E-63 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 SMART SM00086 195 237 0.033 T 13-10-2018 IPR001610 PAC motif Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 SMART SM00086 72 113 20.0 T 13-10-2018 IPR001610 PAC motif Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 120 1.0E-7 T 13-10-2018 IPR000014 PAS domain Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 121 244 1.9E-15 T 13-10-2018 IPR000014 PAS domain Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 Gene3D G3DSA:3.30.450.20 117 239 1.0E-18 T 13-10-2018 Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 SUPERFAMILY SSF55785 110 235 3.49E-19 T 13-10-2018 IPR035965 PAS domain superfamily Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 244 407 4.6E-42 T 13-10-2018 IPR000160 GGDEF domain Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 Pfam PF13426 PAS domain 16 111 9.7E-9 T 13-10-2018 IPR000014 PAS domain Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 Pfam PF13426 PAS domain 148 236 6.5E-5 T 13-10-2018 IPR000014 PAS domain Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 SMART SM00267 237 411 4.7E-50 T 13-10-2018 IPR000160 GGDEF domain Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 SMART SM00091 1 65 0.0018 T 13-10-2018 IPR000014 PAS domain Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 SMART SM00091 125 192 7.2E-5 T 13-10-2018 IPR000014 PAS domain Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 Pfam PF00990 Diguanylate cyclase, GGDEF domain 248 405 3.8E-40 T 13-10-2018 IPR000160 GGDEF domain Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 SUPERFAMILY SSF55073 253 409 6.28E-42 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 Gene3D G3DSA:3.30.450.20 12 116 1.4E-12 T 13-10-2018 Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 SUPERFAMILY SSF55785 16 121 3.22E-15 T 13-10-2018 IPR035965 PAS domain superfamily Atc_1559 0d4092fb306ca97f64e478e6e0078462 437 Gene3D G3DSA:3.30.70.270 240 411 1.6E-48 T 13-10-2018 Atc_1055 d5b14c430d28f02b56d900b19c9afd07 382 Pfam PF04055 Radical SAM superfamily 93 245 5.9E-15 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_1055 d5b14c430d28f02b56d900b19c9afd07 382 SUPERFAMILY SSF102114 59 327 2.22E-44 T 13-10-2018 Atc_1055 d5b14c430d28f02b56d900b19c9afd07 382 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 18 366 7.1E-195 T 13-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme Atc_1055 d5b14c430d28f02b56d900b19c9afd07 382 Gene3D G3DSA:3.20.20.70 77 299 2.2E-36 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2446 b386f22b82bade6d3e4b7c010b8e37b8 364 ProSitePatterns PS01054 Transaldolase signature 1. 42 50 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Atc_2446 b386f22b82bade6d3e4b7c010b8e37b8 364 SUPERFAMILY SSF51569 9 362 7.57E-67 T 13-10-2018 Atc_2446 b386f22b82bade6d3e4b7c010b8e37b8 364 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 16 358 1.3E-73 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Atc_2446 b386f22b82bade6d3e4b7c010b8e37b8 364 Gene3D G3DSA:3.20.20.70 4 363 1.6E-132 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2446 b386f22b82bade6d3e4b7c010b8e37b8 364 PIRSF PIRSF036915 1 364 1.7E-126 T 13-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Atc_2446 b386f22b82bade6d3e4b7c010b8e37b8 364 ProSitePatterns PS00958 Transaldolase active site. 136 153 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Atc_2446 b386f22b82bade6d3e4b7c010b8e37b8 364 Hamap MF_00493 Transaldolase [tal]. 1 364 124.039 T 13-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Atc_2446 b386f22b82bade6d3e4b7c010b8e37b8 364 TIGRFAM TIGR00876 tal_mycobact: transaldolase 14 358 1.9E-87 T 13-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Gene3D G3DSA:2.40.50.100 1011 1114 1.9E-24 T 13-10-2018 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Gene3D G3DSA:2.40.50.100 1139 1202 4.3E-67 T 13-10-2018 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Gene3D G3DSA:1.10.132.30 625 777 1.9E-65 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 SUPERFAMILY SSF64484 16 1351 0.0 T 13-10-2018 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 SMART SM00663 235 514 1.7E-183 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Gene3D G3DSA:1.10.40.90 374 416 3.7E-23 T 13-10-2018 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1032 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 485 6.7E-35 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Pfam PF05000 RNA polymerase Rpb1, domain 4 660 750 3.9E-19 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Gene3D G3DSA:1.10.274.100 490 555 4.7E-22 T 13-10-2018 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Gene3D G3DSA:1.10.150.390 1303 1362 2.6E-28 T 13-10-2018 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Gene3D G3DSA:2.40.50.100 935 1010 9.5E-26 T 13-10-2018 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Pfam PF04998 RNA polymerase Rpb1, domain 5 753 1303 2.7E-74 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 631 2.8E-28 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1361 19.117 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.0E-87 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0599 df7dc9a0a5205429ff33b94f8b7de387 1382 Gene3D G3DSA:1.10.1790.20 1123 1301 4.3E-67 T 13-10-2018 Atc_3p23 897439173de76903c83f79140c436373 129 Gene3D G3DSA:3.40.50.1010 1 123 3.5E-17 T 13-10-2018 Atc_3p23 897439173de76903c83f79140c436373 129 SUPERFAMILY SSF88723 2 121 2.19E-11 T 13-10-2018 IPR029060 PIN-like domain superfamily Atc_3p23 897439173de76903c83f79140c436373 129 Pfam PF01850 PIN domain 1 119 4.1E-10 T 13-10-2018 IPR002716 PIN domain Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 Gene3D G3DSA:3.30.70.260 273 363 8.0E-29 T 13-10-2018 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 SUPERFAMILY SSF48600 11 100 2.75E-19 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 PIRSF PIRSF001500 6 364 1.9E-117 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 SUPERFAMILY SSF55021 266 361 4.58E-24 T 13-10-2018 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 Pfam PF00800 Prephenate dehydratase 98 271 1.4E-55 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 Gene3D G3DSA:3.40.190.10 178 261 7.1E-55 T 13-10-2018 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 SMART SM00830 16 96 7.7E-27 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 Pfam PF01817 Chorismate mutase type II 16 94 3.8E-20 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 TIGRFAM TIGR01807 CM_P2: chorismate mutase 12 86 1.6E-21 T 13-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 Pfam PF01842 ACT domain 284 347 8.9E-7 T 13-10-2018 IPR002912 ACT domain Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 SUPERFAMILY SSF53850 97 279 3.15E-53 T 13-10-2018 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 Gene3D G3DSA:1.20.59.10 9 96 1.8E-26 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 309 316 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Atc_1388 7c03e1ea7ab4e84df5b30bfa50985aa1 364 Gene3D G3DSA:3.40.190.10 100 269 7.1E-55 T 13-10-2018 Atc_0229 4533964b1074e74c1884a8d1707a33a6 335 SUPERFAMILY SSF82549 10 331 1.46E-118 T 13-10-2018 Atc_0229 4533964b1074e74c1884a8d1707a33a6 335 Gene3D G3DSA:3.40.50.10440 11 184 6.4E-65 T 13-10-2018 Atc_0229 4533964b1074e74c1884a8d1707a33a6 335 Gene3D G3DSA:3.30.1180.20 185 333 2.7E-48 T 13-10-2018 Atc_0229 4533964b1074e74c1884a8d1707a33a6 335 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 329 4.7E-139 T 13-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 Atc_0229 4533964b1074e74c1884a8d1707a33a6 335 Pfam PF02733 Dak1 domain 17 328 3.0E-125 T 13-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Atc_1661 d0f9a2401be911dcd4bcc1f586b6f9ef 459 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 143 440 2.1E-115 T 13-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_1661 d0f9a2401be911dcd4bcc1f586b6f9ef 459 Gene3D G3DSA:3.20.20.110 137 439 4.9E-129 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_1661 d0f9a2401be911dcd4bcc1f586b6f9ef 459 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 186 194 - T 13-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_1661 d0f9a2401be911dcd4bcc1f586b6f9ef 459 Gene3D G3DSA:3.30.70.150 5 136 1.3E-48 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_1661 d0f9a2401be911dcd4bcc1f586b6f9ef 459 SUPERFAMILY SSF51649 138 454 6.81E-111 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_1661 d0f9a2401be911dcd4bcc1f586b6f9ef 459 Hamap MF_01339 Ribulose bisphosphate carboxylase [cbbM]. 1 459 78.143 T 13-10-2018 IPR020871 Ribulose bisphosphate carboxylase large subunit, type II GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_1661 d0f9a2401be911dcd4bcc1f586b6f9ef 459 SUPERFAMILY SSF54966 2 137 6.67E-47 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_1661 d0f9a2401be911dcd4bcc1f586b6f9ef 459 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 12 130 4.3E-37 T 13-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0959 5d8c366a1e98e3e5e0382efe3cddf3a1 272 Gene3D G3DSA:3.30.110.70 41 131 3.2E-11 T 13-10-2018 Atc_0959 5d8c366a1e98e3e5e0382efe3cddf3a1 272 Gene3D G3DSA:3.30.110.70 160 253 1.1E-11 T 13-10-2018 Atc_0959 5d8c366a1e98e3e5e0382efe3cddf3a1 272 SUPERFAMILY SSF117782 44 129 7.98E-15 T 13-10-2018 IPR035439 UPF0145 domain superfamily Atc_0959 5d8c366a1e98e3e5e0382efe3cddf3a1 272 SUPERFAMILY SSF117782 163 251 2.49E-13 T 13-10-2018 IPR035439 UPF0145 domain superfamily Atc_0959 5d8c366a1e98e3e5e0382efe3cddf3a1 272 Pfam PF01906 Putative heavy-metal-binding 71 127 8.6E-9 T 13-10-2018 IPR002765 Uncharacterised protein family UPF0145 Atc_0959 5d8c366a1e98e3e5e0382efe3cddf3a1 272 Pfam PF01906 Putative heavy-metal-binding 182 250 3.3E-10 T 13-10-2018 IPR002765 Uncharacterised protein family UPF0145 Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 SUPERFAMILY SSF50249 3 125 1.23E-45 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.199 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 Gene3D G3DSA:2.40.50.140 1 114 2.7E-44 T 13-10-2018 Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 8.1E-128 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 SUPERFAMILY SSF50104 126 272 7.82E-62 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 PIRSF PIRSF002158 10 274 4.8E-101 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.1E-57 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 13-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 Gene3D G3DSA:2.30.30.30 118 195 9.8E-33 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 SMART SM01383 42 118 1.1E-40 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 SMART SM01382 124 252 2.9E-93 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.4E-30 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0608 eb8130ee7177c6f3e13a30f0f2b84065 274 Gene3D G3DSA:4.10.950.10 196 274 1.9E-36 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_1867 80e52878b9233591f461a7037c94cc4d 362 SMART SM00091 16 82 3.2E-5 T 13-10-2018 IPR000014 PAS domain Atc_1867 80e52878b9233591f461a7037c94cc4d 362 Pfam PF08448 PAS fold 23 112 1.9E-9 T 13-10-2018 IPR013656 PAS fold-4 Atc_1867 80e52878b9233591f461a7037c94cc4d 362 SUPERFAMILY SSF55874 208 358 8.38E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1867 80e52878b9233591f461a7037c94cc4d 362 SMART SM00388 141 202 5.3E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_1867 80e52878b9233591f461a7037c94cc4d 362 SUPERFAMILY SSF55785 21 114 2.27E-13 T 13-10-2018 IPR035965 PAS domain superfamily Atc_1867 80e52878b9233591f461a7037c94cc4d 362 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 359 5.2E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_1867 80e52878b9233591f461a7037c94cc4d 362 Pfam PF00512 His Kinase A (phospho-acceptor) domain 143 198 6.0E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_1867 80e52878b9233591f461a7037c94cc4d 362 Gene3D G3DSA:3.30.565.10 204 359 1.5E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1867 80e52878b9233591f461a7037c94cc4d 362 Gene3D G3DSA:1.10.287.130 126 201 2.2E-12 T 13-10-2018 Atc_1867 80e52878b9233591f461a7037c94cc4d 362 SUPERFAMILY SSF47384 136 198 1.84E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_1867 80e52878b9233591f461a7037c94cc4d 362 Gene3D G3DSA:3.30.450.20 18 120 7.9E-12 T 13-10-2018 Atc_1867 80e52878b9233591f461a7037c94cc4d 362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 306 9.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1867 80e52878b9233591f461a7037c94cc4d 362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 9.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1867 80e52878b9233591f461a7037c94cc4d 362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 320 9.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_1867 80e52878b9233591f461a7037c94cc4d 362 SMART SM00387 245 360 5.3E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_1291 ef2eb3cfc0af2839f4a0aaf479f19c9b 294 Pfam PF03837 RecT family 25 206 1.1E-24 T 13-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 Atc_1291 ef2eb3cfc0af2839f4a0aaf479f19c9b 294 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 13 198 1.0E-38 T 13-10-2018 IPR010183 Bacteriophage lambda, Bet Atc_1059 b9dd59a2bb2896c5238f35d8a157adcc 114 SUPERFAMILY SSF55008 39 112 4.19E-14 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atc_1059 b9dd59a2bb2896c5238f35d8a157adcc 114 Pfam PF00403 Heavy-metal-associated domain 46 107 8.0E-10 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atc_1059 b9dd59a2bb2896c5238f35d8a157adcc 114 Gene3D G3DSA:3.30.70.100 42 112 4.9E-15 T 13-10-2018 Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 SUPERFAMILY SSF55785 193 289 1.33E-6 T 13-10-2018 IPR035965 PAS domain superfamily Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 Gene3D G3DSA:3.30.450.20 171 281 7.1E-6 T 13-10-2018 Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 SUPERFAMILY SSF55874 352 510 6.42E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 Gene3D G3DSA:1.10.287.130 282 358 1.0E-15 T 13-10-2018 Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 SMART SM00387 402 512 8.4E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 509 2.7E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 Pfam PF00512 His Kinase A (phospho-acceptor) domain 294 357 2.2E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 SMART SM00388 294 360 5.1E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 490 3.5E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 509 3.5E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 3.5E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 3.5E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 Gene3D G3DSA:3.30.565.10 363 512 8.3E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_2860 cc74cdd78f3f78e4a9289d5c47bc20b5 517 SUPERFAMILY SSF47384 282 357 2.35E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_0098 194823c98857cdfd79a7667830625077 113 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 10 101 1.5E-13 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atc_0098 194823c98857cdfd79a7667830625077 113 Gene3D G3DSA:3.30.2310.20 4 106 1.5E-15 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atc_0098 194823c98857cdfd79a7667830625077 113 SUPERFAMILY SSF143011 42 101 4.12E-6 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 Pfam PF00158 Sigma-54 interaction domain 140 307 1.8E-66 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 Gene3D G3DSA:1.10.8.60 311 390 3.9E-23 T 13-10-2018 Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 SMART SM00448 9 120 4.7E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 SUPERFAMILY SSF52540 140 382 5.21E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 SUPERFAMILY SSF46689 354 448 4.48E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 SMART SM00382 160 303 2.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 SUPERFAMILY SSF52172 8 184 1.85E-40 T 13-10-2018 IPR011006 CheY-like superfamily Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 Gene3D G3DSA:3.40.50.2300 2 134 3.9E-31 T 13-10-2018 Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 Gene3D G3DSA:3.40.50.300 135 310 1.3E-62 T 13-10-2018 Atc_2861 0e67c4d1e484271474997ff9cb7a719f 455 Pfam PF00072 Response regulator receiver domain 12 119 1.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_2498 9b810d6f99241bcc6a43acb766f83b87 150 Gene3D G3DSA:2.70.40.10 1 149 1.2E-46 T 13-10-2018 IPR036157 dUTPase-like superfamily Atc_2498 9b810d6f99241bcc6a43acb766f83b87 150 SUPERFAMILY SSF51283 5 148 2.09E-44 T 13-10-2018 IPR036157 dUTPase-like superfamily Atc_2498 9b810d6f99241bcc6a43acb766f83b87 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 149 7.4E-41 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Atc_2498 9b810d6f99241bcc6a43acb766f83b87 150 Pfam PF00692 dUTPase 16 148 2.1E-30 T 13-10-2018 IPR029054 dUTPase-like Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 430 536 2.0E-23 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 SUPERFAMILY SSF55424 429 552 4.3E-29 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 Gene3D G3DSA:3.30.390.30 429 554 6.0E-39 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 PIRSF PIRSF000350 2 554 1.8E-239 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 PRINTS PR00945 Mercuric reductase class II signature 139 158 6.0E-69 T 13-10-2018 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 PRINTS PR00945 Mercuric reductase class II signature 230 247 6.0E-69 T 13-10-2018 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 PRINTS PR00945 Mercuric reductase class II signature 527 546 6.0E-69 T 13-10-2018 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 PRINTS PR00945 Mercuric reductase class II signature 104 122 6.0E-69 T 13-10-2018 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 PRINTS PR00945 Mercuric reductase class II signature 462 482 6.0E-69 T 13-10-2018 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 PRINTS PR00945 Mercuric reductase class II signature 16 26 6.0E-69 T 13-10-2018 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 PRINTS PR00945 Mercuric reductase class II signature 265 282 6.0E-69 T 13-10-2018 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 PRINTS PR00945 Mercuric reductase class II signature 285 300 6.0E-69 T 13-10-2018 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 SUPERFAMILY SSF55008 4 69 1.57E-14 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 SUPERFAMILY SSF51905 94 419 1.62E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 Gene3D G3DSA:3.50.50.60 96 412 2.0E-110 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 Gene3D G3DSA:3.50.50.60 238 354 2.0E-110 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 94 411 1.2E-63 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 127 137 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 Gene3D G3DSA:3.30.70.100 5 69 2.5E-16 T 13-10-2018 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 Pfam PF00403 Heavy-metal-associated domain 8 65 2.2E-10 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atc_1058 4f553215e1fdf22724b58987cd1ef11f 554 TIGRFAM TIGR02053 MerA: mercury(II) reductase 93 554 2.4E-169 T 13-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 Atc_0289 f2cb164fe484119362ab43e32a7aa73b 493 Gene3D G3DSA:1.10.579.10 291 463 2.1E-45 T 13-10-2018 Atc_0289 f2cb164fe484119362ab43e32a7aa73b 493 Pfam PF00875 DNA photolyase 5 128 9.2E-23 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Atc_0289 f2cb164fe484119362ab43e32a7aa73b 493 Gene3D G3DSA:3.40.50.620 2 125 4.1E-29 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0289 f2cb164fe484119362ab43e32a7aa73b 493 Gene3D G3DSA:1.25.40.80 126 284 9.6E-16 T 13-10-2018 Atc_0289 f2cb164fe484119362ab43e32a7aa73b 493 Pfam PF03441 FAD binding domain of DNA photolyase 270 418 5.0E-44 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Atc_0289 f2cb164fe484119362ab43e32a7aa73b 493 SUPERFAMILY SSF52425 5 182 5.1E-40 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Atc_0289 f2cb164fe484119362ab43e32a7aa73b 493 PRINTS PR00147 DNA photolyase signature 340 358 3.8E-5 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Atc_0289 f2cb164fe484119362ab43e32a7aa73b 493 PRINTS PR00147 DNA photolyase signature 320 336 3.8E-5 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Atc_0289 f2cb164fe484119362ab43e32a7aa73b 493 SUPERFAMILY SSF48173 189 446 6.93E-72 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Atc_2620 f9aead1c0f2be193479b9c509225f265 211 SMART SM00479 13 197 1.2E-27 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atc_2620 f9aead1c0f2be193479b9c509225f265 211 Pfam PF00929 Exonuclease 15 188 2.6E-29 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atc_2620 f9aead1c0f2be193479b9c509225f265 211 Hamap MF_00157 Ribonuclease T [rnt]. 1 211 82.49 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Atc_2620 f9aead1c0f2be193479b9c509225f265 211 Gene3D G3DSA:3.30.420.10 5 202 2.9E-48 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_2620 f9aead1c0f2be193479b9c509225f265 211 TIGRFAM TIGR01298 RNaseT: ribonuclease T 5 198 4.7E-80 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Atc_2620 f9aead1c0f2be193479b9c509225f265 211 SUPERFAMILY SSF53098 4 197 2.47E-51 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1297 c3a0226a2bd56fb429a17dada6343c53 134 Pfam PF01475 Ferric uptake regulator family 5 103 1.6E-18 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Atc_1297 c3a0226a2bd56fb429a17dada6343c53 134 SUPERFAMILY SSF46785 2 99 1.94E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1297 c3a0226a2bd56fb429a17dada6343c53 134 Gene3D G3DSA:1.10.10.10 1 75 3.8E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0065 5e020c7c344d69474240d78e637299e7 151 Gene3D G3DSA:1.10.1200.120 4 130 1.3E-28 T 13-10-2018 IPR036019 Gated mechanosensitive channel Atc_0065 5e020c7c344d69474240d78e637299e7 151 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 117 3.4E-33 T 13-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L Atc_0065 5e020c7c344d69474240d78e637299e7 151 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 117 6.3E-29 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Atc_0065 5e020c7c344d69474240d78e637299e7 151 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 7 21 6.1E-7 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Atc_0065 5e020c7c344d69474240d78e637299e7 151 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 96 104 6.1E-7 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Atc_0065 5e020c7c344d69474240d78e637299e7 151 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 105 114 6.1E-7 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Atc_0065 5e020c7c344d69474240d78e637299e7 151 SUPERFAMILY SSF81330 14 128 1.83E-29 T 13-10-2018 IPR036019 Gated mechanosensitive channel Atc_0065 5e020c7c344d69474240d78e637299e7 151 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 4 143 20.411 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Atc_2809 e4636cc5e5f6477249a6664664407630 335 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 13-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atc_2809 e4636cc5e5f6477249a6664664407630 335 Pfam PF00490 Delta-aminolevulinic acid dehydratase 15 333 1.3E-137 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atc_2809 e4636cc5e5f6477249a6664664407630 335 SMART SM01004 12 334 1.8E-202 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atc_2809 e4636cc5e5f6477249a6664664407630 335 PIRSF PIRSF001415 7 335 4.3E-140 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atc_2809 e4636cc5e5f6477249a6664664407630 335 Gene3D G3DSA:3.20.20.70 8 335 5.1E-139 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2809 e4636cc5e5f6477249a6664664407630 335 SUPERFAMILY SSF51569 11 335 6.74E-133 T 13-10-2018 Atc_2809 e4636cc5e5f6477249a6664664407630 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 2.0E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atc_2809 e4636cc5e5f6477249a6664664407630 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 201 220 2.0E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atc_2809 e4636cc5e5f6477249a6664664407630 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 2.0E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atc_2809 e4636cc5e5f6477249a6664664407630 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 163 182 2.0E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atc_2809 e4636cc5e5f6477249a6664664407630 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 132 146 2.0E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atc_2809 e4636cc5e5f6477249a6664664407630 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 2.0E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atc_m162 083e369626a36aa2cc0e0f9023f616c2 1764 SUPERFAMILY SSF52540 91 278 1.81E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m162 083e369626a36aa2cc0e0f9023f616c2 1764 SMART SM00487 88 316 6.1E-20 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_m162 083e369626a36aa2cc0e0f9023f616c2 1764 Gene3D G3DSA:3.40.50.300 937 1093 4.6E-16 T 13-10-2018 Atc_m162 083e369626a36aa2cc0e0f9023f616c2 1764 SMART SM00490 943 1047 6.1E-8 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_m162 083e369626a36aa2cc0e0f9023f616c2 1764 Pfam PF09369 Domain of unknown function (DUF1998) 1524 1622 1.5E-11 T 13-10-2018 IPR018973 DEAD/DEAH-box helicase, putative Atc_m162 083e369626a36aa2cc0e0f9023f616c2 1764 Pfam PF00270 DEAD/DEAH box helicase 96 278 2.1E-21 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atc_m162 083e369626a36aa2cc0e0f9023f616c2 1764 Pfam PF00271 Helicase conserved C-terminal domain 958 1047 9.5E-7 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_m162 083e369626a36aa2cc0e0f9023f616c2 1764 Gene3D G3DSA:3.40.50.300 78 293 5.7E-37 T 13-10-2018 Atc_m162 083e369626a36aa2cc0e0f9023f616c2 1764 SUPERFAMILY SSF52540 107 1093 1.37E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2370 67099a49aa35e78b3e24b99981929d4c 575 Pfam PF02872 5'-nucleotidase, C-terminal domain 394 524 5.4E-11 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2370 67099a49aa35e78b3e24b99981929d4c 575 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 4 557 2.9E-258 T 13-10-2018 IPR030998 Thiosulfohydrolase SoxB Atc_2370 67099a49aa35e78b3e24b99981929d4c 575 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 30 2.7E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Atc_2370 67099a49aa35e78b3e24b99981929d4c 575 Gene3D G3DSA:3.90.780.10 379 565 7.1E-66 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2370 67099a49aa35e78b3e24b99981929d4c 575 SUPERFAMILY SSF55816 376 550 3.66E-25 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2370 67099a49aa35e78b3e24b99981929d4c 575 PRINTS PR01607 Apyrase family signature 316 336 1.5E-9 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2370 67099a49aa35e78b3e24b99981929d4c 575 PRINTS PR01607 Apyrase family signature 43 61 1.5E-9 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2370 67099a49aa35e78b3e24b99981929d4c 575 PRINTS PR01607 Apyrase family signature 268 285 1.5E-9 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2370 67099a49aa35e78b3e24b99981929d4c 575 PRINTS PR01607 Apyrase family signature 287 310 1.5E-9 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2370 67099a49aa35e78b3e24b99981929d4c 575 SUPERFAMILY SSF56300 40 378 1.9E-74 T 13-10-2018 Atc_2370 67099a49aa35e78b3e24b99981929d4c 575 Gene3D G3DSA:3.60.21.10 107 378 8.2E-79 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Atc_0316 9f1fbf501fa4787dd3dc69a49025226a 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 414 2.1E-147 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Atc_0316 9f1fbf501fa4787dd3dc69a49025226a 414 Pfam PF02687 FtsX-like permease family 301 407 4.7E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Atc_0316 9f1fbf501fa4787dd3dc69a49025226a 414 Pfam PF12704 MacB-like periplasmic core domain 26 243 1.2E-17 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Atc_1129 fce00b700f6ba69fac25cb84b14d3920 389 Gene3D G3DSA:3.40.190.10 9 351 4.0E-113 T 13-10-2018 Atc_1129 fce00b700f6ba69fac25cb84b14d3920 389 SUPERFAMILY SSF53850 5 253 3.62E-21 T 13-10-2018 Atc_1129 fce00b700f6ba69fac25cb84b14d3920 389 Pfam PF13379 NMT1-like family 5 262 1.8E-69 T 13-10-2018 Atc_1129 fce00b700f6ba69fac25cb84b14d3920 389 Gene3D G3DSA:3.40.190.10 93 214 4.0E-113 T 13-10-2018 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 SUPERFAMILY SSF52374 3 297 4.56E-113 T 13-10-2018 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 Gene3D G3DSA:1.10.10.350 365 464 5.2E-21 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 461 4.8E-172 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 Gene3D G3DSA:3.40.50.620 2 312 2.8E-135 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2443 1b575bd7e40af4de646c311af8428efe 467 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 463 32.358 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 SUPERFAMILY SSF48163 298 463 2.75E-37 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 304 9.0E-106 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.9E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.9E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.9E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 4.9E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_2443 1b575bd7e40af4de646c311af8428efe 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 4.9E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_0706 ea93b909168050898650e23d789fd58d 181 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 9 164 2.5E-17 T 13-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component Atc_0706 ea93b909168050898650e23d789fd58d 181 SUPERFAMILY SSF159594 8 173 4.71E-31 T 13-10-2018 Atc_0706 ea93b909168050898650e23d789fd58d 181 Gene3D G3DSA:3.40.50.10610 2 180 1.3E-31 T 13-10-2018 Atc_1151 43f80e31dc5c487f4d7b380f71344619 114 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 41 72 3.3E-10 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Atc_1151 43f80e31dc5c487f4d7b380f71344619 114 Gene3D G3DSA:1.20.120.910 4 75 1.5E-11 T 13-10-2018 Atc_2182 530f56fd81c07091a41270f79b7e1980 211 Pfam PF13091 PLD-like domain 74 198 9.2E-27 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atc_2182 530f56fd81c07091a41270f79b7e1980 211 Gene3D G3DSA:3.30.870.10 57 208 3.7E-39 T 13-10-2018 Atc_2182 530f56fd81c07091a41270f79b7e1980 211 SMART SM00155 142 169 1.4E-4 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Atc_2182 530f56fd81c07091a41270f79b7e1980 211 SUPERFAMILY SSF56024 63 204 2.69E-33 T 13-10-2018 Atc_0517 31f78075292d671806fc01dbf7c59ca9 466 Gene3D G3DSA:1.10.10.60 410 461 2.2E-13 T 13-10-2018 Atc_0517 31f78075292d671806fc01dbf7c59ca9 466 SUPERFAMILY SSF46689 371 459 4.93E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0517 31f78075292d671806fc01dbf7c59ca9 466 SUPERFAMILY SSF52172 34 202 1.57E-6 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0517 31f78075292d671806fc01dbf7c59ca9 466 Gene3D G3DSA:1.10.8.60 329 407 1.1E-23 T 13-10-2018 Atc_0517 31f78075292d671806fc01dbf7c59ca9 466 Gene3D G3DSA:3.40.50.300 148 328 9.7E-66 T 13-10-2018 Atc_0517 31f78075292d671806fc01dbf7c59ca9 466 SUPERFAMILY SSF52540 157 399 4.13E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0517 31f78075292d671806fc01dbf7c59ca9 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 371 380 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_0517 31f78075292d671806fc01dbf7c59ca9 466 Pfam PF00158 Sigma-54 interaction domain 158 324 7.1E-72 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_0517 31f78075292d671806fc01dbf7c59ca9 466 Pfam PF02954 Bacterial regulatory protein, Fis family 419 457 1.2E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_0517 31f78075292d671806fc01dbf7c59ca9 466 SMART SM00382 178 322 9.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0517 31f78075292d671806fc01dbf7c59ca9 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 244 259 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 SMART SM00864 13 205 1.7E-113 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 Pfam PF12327 FtsZ family, C-terminal domain 222 317 4.0E-33 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 351 37.761 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 SMART SM00865 207 325 8.0E-55 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 SUPERFAMILY SSF52490 13 208 1.7E-70 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 Gene3D G3DSA:3.40.50.1440 11 317 3.7E-118 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 321 9.8E-133 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 172 6.4E-44 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 SUPERFAMILY SSF55307 204 319 1.05E-40 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.9E-49 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.9E-49 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.9E-49 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atc_2666 061b878a0dfd45538a2eef67c13da98b 386 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.9E-49 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atc_1333 185cb158d6df9769eb32bd0d576304f9 382 SUPERFAMILY SSF53187 4 376 4.45E-66 T 13-10-2018 Atc_1333 185cb158d6df9769eb32bd0d576304f9 382 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 8 376 1.2E-158 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Atc_1333 185cb158d6df9769eb32bd0d576304f9 382 SUPERFAMILY SSF55031 182 291 3.14E-27 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atc_1333 185cb158d6df9769eb32bd0d576304f9 382 Pfam PF07687 Peptidase dimerisation domain 178 285 6.1E-24 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain Atc_1333 185cb158d6df9769eb32bd0d576304f9 382 Gene3D G3DSA:3.40.630.10 11 365 1.5E-127 T 13-10-2018 Atc_1333 185cb158d6df9769eb32bd0d576304f9 382 Pfam PF01546 Peptidase family M20/M25/M40 65 374 3.7E-44 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 Atc_1333 185cb158d6df9769eb32bd0d576304f9 382 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 5 378 50.76 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Atc_1333 185cb158d6df9769eb32bd0d576304f9 382 Gene3D G3DSA:3.30.70.360 182 295 1.5E-127 T 13-10-2018 Atc_1333 185cb158d6df9769eb32bd0d576304f9 382 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 100 138 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Atc_2875 092ddb8bfbf6a585c6bf330d1c51770b 199 SUPERFAMILY SSF55469 1 194 1.31E-52 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atc_2875 092ddb8bfbf6a585c6bf330d1c51770b 199 Pfam PF00881 Nitroreductase family 8 177 4.4E-31 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Atc_2875 092ddb8bfbf6a585c6bf330d1c51770b 199 Gene3D G3DSA:3.40.109.10 1 199 4.9E-47 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atc_1856 5657cfa64f47c478344f9b46346231db 184 Pfam PF13767 Domain of unknown function (DUF4168) 99 175 1.3E-11 T 13-10-2018 IPR025433 Domain of unknown function DUF4168 Atc_0268 5c8dffc550cab9c55ee2652484baf60f 148 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 14 141 6.4E-23 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Atc_0268 5c8dffc550cab9c55ee2652484baf60f 148 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 11 146 18.019 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Atc_0268 5c8dffc550cab9c55ee2652484baf60f 148 SMART SM00732 11 111 1.3E-18 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Atc_0268 5c8dffc550cab9c55ee2652484baf60f 148 Gene3D G3DSA:3.30.420.140 9 144 1.3E-32 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Atc_0268 5c8dffc550cab9c55ee2652484baf60f 148 Pfam PF03652 Holliday junction resolvase 13 141 4.2E-31 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Atc_0268 5c8dffc550cab9c55ee2652484baf60f 148 SUPERFAMILY SSF53098 12 141 2.12E-28 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_0974 a1c31954bfe0ed2e856fec3a8e17dbea 157 SUPERFAMILY SSF54593 16 134 1.88E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atc_0974 a1c31954bfe0ed2e856fec3a8e17dbea 157 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 129 2.7E-13 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atc_0974 a1c31954bfe0ed2e856fec3a8e17dbea 157 Gene3D G3DSA:3.10.180.10 11 137 2.0E-27 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 Gene3D G3DSA:3.10.350.10 551 613 1.1E-14 T 13-10-2018 IPR036779 LysM domain superfamily Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 Pfam PF01476 LysM domain 568 610 7.7E-11 T 13-10-2018 IPR018392 LysM domain Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 Pfam PF01476 LysM domain 382 422 1.2E-12 T 13-10-2018 IPR018392 LysM domain Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 Pfam PF01476 LysM domain 500 543 1.4E-12 T 13-10-2018 IPR018392 LysM domain Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 Pfam PF01476 LysM domain 437 480 8.3E-14 T 13-10-2018 IPR018392 LysM domain Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 Gene3D G3DSA:3.10.350.10 435 480 2.7E-16 T 13-10-2018 IPR036779 LysM domain superfamily Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 Gene3D G3DSA:3.10.350.10 498 544 9.6E-15 T 13-10-2018 IPR036779 LysM domain superfamily Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 Pfam PF01464 Transglycosylase SLT domain 145 247 1.3E-23 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 Gene3D G3DSA:1.10.530.10 134 286 5.9E-32 T 13-10-2018 Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 SMART SM00257 567 611 4.2E-10 T 13-10-2018 IPR018392 LysM domain Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 SMART SM00257 379 423 6.6E-13 T 13-10-2018 IPR018392 LysM domain Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 SMART SM00257 499 543 2.2E-13 T 13-10-2018 IPR018392 LysM domain Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 SMART SM00257 436 480 2.3E-15 T 13-10-2018 IPR018392 LysM domain Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 Gene3D G3DSA:3.10.350.10 378 428 3.7E-15 T 13-10-2018 IPR036779 LysM domain superfamily Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 SUPERFAMILY SSF54106 566 611 1.7E-9 T 13-10-2018 Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 SUPERFAMILY SSF54106 378 423 1.22E-9 T 13-10-2018 Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 SUPERFAMILY SSF54106 436 480 1.03E-9 T 13-10-2018 Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 SUPERFAMILY SSF53955 136 285 1.45E-36 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 157 185 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Atc_2444 ccf18d0f459e19c470733c733a3bb971 613 SUPERFAMILY SSF54106 499 543 4.32E-9 T 13-10-2018 Atc_0053 a106765300e4f9dc12041dd01cfe2df0 635 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 461 624 2.8E-53 T 13-10-2018 IPR000160 GGDEF domain Atc_0053 a106765300e4f9dc12041dd01cfe2df0 635 SUPERFAMILY SSF109604 8 278 1.69E-44 T 13-10-2018 Atc_0053 a106765300e4f9dc12041dd01cfe2df0 635 Pfam PF08668 HDOD domain 15 210 1.0E-38 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Atc_0053 a106765300e4f9dc12041dd01cfe2df0 635 SMART SM00267 453 625 6.8E-63 T 13-10-2018 IPR000160 GGDEF domain Atc_0053 a106765300e4f9dc12041dd01cfe2df0 635 Gene3D G3DSA:1.10.3210.10 12 273 9.0E-57 T 13-10-2018 Atc_0053 a106765300e4f9dc12041dd01cfe2df0 635 SUPERFAMILY SSF55073 469 626 3.66E-49 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_0053 a106765300e4f9dc12041dd01cfe2df0 635 Pfam PF00990 Diguanylate cyclase, GGDEF domain 464 621 4.3E-50 T 13-10-2018 IPR000160 GGDEF domain Atc_0053 a106765300e4f9dc12041dd01cfe2df0 635 Gene3D G3DSA:3.30.70.270 451 627 7.6E-59 T 13-10-2018 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 SUPERFAMILY SSF46689 353 445 3.37E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 446 1.9E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 409 426 1.9E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 Gene3D G3DSA:1.10.10.60 403 447 1.4E-10 T 13-10-2018 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 Gene3D G3DSA:1.10.8.60 315 393 9.4E-21 T 13-10-2018 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 Pfam PF02954 Bacterial regulatory protein, Fis family 407 442 4.7E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 Pfam PF00158 Sigma-54 interaction domain 145 309 1.0E-64 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 SUPERFAMILY SSF52540 143 382 7.07E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 SMART SM00382 163 305 8.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 135 3.5E-8 T 13-10-2018 IPR000014 PAS domain Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 Gene3D G3DSA:3.30.450.20 14 132 7.9E-9 T 13-10-2018 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 Gene3D G3DSA:3.40.50.300 133 314 6.7E-62 T 13-10-2018 Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 SUPERFAMILY SSF55785 26 135 6.47E-9 T 13-10-2018 IPR035965 PAS domain superfamily Atc_0787 9f3527f1029191f773d2f19ee5f14856 451 Pfam PF00989 PAS fold 17 124 1.3E-5 T 13-10-2018 IPR013767 PAS fold GO:0006355 Atc_0360 1b702d9191c240284316238ce0fab4ac 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 9.9E-5 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atc_0360 1b702d9191c240284316238ce0fab4ac 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 21 42 9.9E-5 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atc_0360 1b702d9191c240284316238ce0fab4ac 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 9.9E-5 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atc_0360 1b702d9191c240284316238ce0fab4ac 266 PIRSF PIRSF006648 2 236 1.2E-22 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atc_0360 1b702d9191c240284316238ce0fab4ac 266 Pfam PF01061 ABC-2 type transporter 7 216 4.8E-35 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Atc_1035 2d4557b14b2235517ad1d67a59049460 595 SUPERFAMILY SSF56349 251 535 4.41E-31 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_1035 2d4557b14b2235517ad1d67a59049460 595 Gene3D G3DSA:1.10.150.130 246 353 1.5E-8 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_1035 2d4557b14b2235517ad1d67a59049460 595 Pfam PF00589 Phage integrase family 397 533 1.3E-6 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_1035 2d4557b14b2235517ad1d67a59049460 595 Gene3D G3DSA:1.10.443.10 388 538 1.5E-14 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_2009 e67220768c301a096c74ee9ae7d16384 156 Pfam PF01553 Acyltransferase 2 115 1.8E-9 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Atc_2009 e67220768c301a096c74ee9ae7d16384 156 SUPERFAMILY SSF69593 3 126 5.62E-10 T 13-10-2018 Atc_2009 e67220768c301a096c74ee9ae7d16384 156 SMART SM00563 2 124 6.3E-4 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 Pfam PF03483 B3/4 domain 222 385 1.6E-50 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 Gene3D G3DSA:3.30.56.10 4 182 1.7E-59 T 13-10-2018 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 Gene3D G3DSA:3.30.70.380 702 795 3.1E-19 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 SMART SM00896 700 793 4.2E-22 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 Gene3D G3DSA:3.30.56.10 407 482 4.6E-24 T 13-10-2018 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 Gene3D G3DSA:3.50.40.10 209 398 2.1E-56 T 13-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 Pfam PF03484 tRNA synthetase B5 domain 413 478 1.7E-18 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 787 37.976 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 Gene3D G3DSA:2.40.50.140 40 155 1.7E-59 T 13-10-2018 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 SUPERFAMILY SSF50249 40 196 3.92E-40 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 SMART SM00873 222 393 3.4E-58 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 Gene3D G3DSA:3.30.930.10 498 689 1.5E-52 T 13-10-2018 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 793 7.6E-214 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 SUPERFAMILY SSF56037 212 401 4.71E-54 T 13-10-2018 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 Pfam PF01588 Putative tRNA binding domain 46 146 2.3E-21 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 SUPERFAMILY SSF55681 474 688 4.52E-47 T 13-10-2018 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 SUPERFAMILY SSF54991 695 793 1.57E-21 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 SMART SM00874 409 478 1.5E-23 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 793 3.6E-18 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Atc_2558 71c719b24567ef0fe56df9436945f8b7 796 SUPERFAMILY SSF46955 410 482 8.06E-17 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Atc_0163 69d69f7960e85fad32397ae0f1bdfe93 390 Gene3D G3DSA:2.60.40.2500 286 387 1.2E-13 T 13-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Atc_0163 69d69f7960e85fad32397ae0f1bdfe93 390 Pfam PF03524 Conjugal transfer protein 152 385 9.8E-17 T 13-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Atc_0039 27e9d3c49e32824a31484a706125b522 513 SUPERFAMILY SSF53098 166 304 2.15E-9 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_0039 27e9d3c49e32824a31484a706125b522 513 SUPERFAMILY SSF46689 8 75 2.15E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0039 27e9d3c49e32824a31484a706125b522 513 Pfam PF00665 Integrase core domain 141 269 5.2E-19 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_0039 27e9d3c49e32824a31484a706125b522 513 Pfam PF13936 Helix-turn-helix domain 5 44 4.4E-7 T 13-10-2018 IPR025246 Transposase IS30-like HTH domain Atc_0039 27e9d3c49e32824a31484a706125b522 513 Gene3D G3DSA:1.10.10.10 9 68 5.4E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2104 27e9d3c49e32824a31484a706125b522 513 SUPERFAMILY SSF53098 166 304 2.15E-9 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_2104 27e9d3c49e32824a31484a706125b522 513 SUPERFAMILY SSF46689 8 75 2.15E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_2104 27e9d3c49e32824a31484a706125b522 513 Pfam PF00665 Integrase core domain 141 269 5.2E-19 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_2104 27e9d3c49e32824a31484a706125b522 513 Pfam PF13936 Helix-turn-helix domain 5 44 4.4E-7 T 13-10-2018 IPR025246 Transposase IS30-like HTH domain Atc_2104 27e9d3c49e32824a31484a706125b522 513 Gene3D G3DSA:1.10.10.10 9 68 5.4E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2657 1792ca1518f89b5f0be7c22edcb989c5 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2657 1792ca1518f89b5f0be7c22edcb989c5 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.619 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2657 1792ca1518f89b5f0be7c22edcb989c5 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2657 1792ca1518f89b5f0be7c22edcb989c5 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 6.6E-5 T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2657 1792ca1518f89b5f0be7c22edcb989c5 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 2.5E-130 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2657 1792ca1518f89b5f0be7c22edcb989c5 360 Pfam PF00953 Glycosyl transferase family 4 99 283 3.0E-37 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Atc_0167 32ed19c6c3ee4199687ffe06ec8dc85f 107 Gene3D G3DSA:2.30.30.110 9 106 1.9E-19 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Atc_0167 32ed19c6c3ee4199687ffe06ec8dc85f 107 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 102 2.7E-20 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Atc_0167 32ed19c6c3ee4199687ffe06ec8dc85f 107 SUPERFAMILY SSF50118 2 105 1.96E-24 T 13-10-2018 Atc_0851 324bf6ab8edad0bc3899a01c80e545a5 360 SUPERFAMILY SSF51161 42 325 4.72E-77 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Atc_0851 324bf6ab8edad0bc3899a01c80e545a5 360 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 18 339 2.6E-107 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Atc_0851 324bf6ab8edad0bc3899a01c80e545a5 360 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 159 189 6.9E-7 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_0851 324bf6ab8edad0bc3899a01c80e545a5 360 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 232 266 1.1E-8 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_0851 324bf6ab8edad0bc3899a01c80e545a5 360 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 302 7.0E-5 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_0851 324bf6ab8edad0bc3899a01c80e545a5 360 Gene3D G3DSA:2.160.10.10 110 317 1.7E-60 T 13-10-2018 Atc_0851 324bf6ab8edad0bc3899a01c80e545a5 360 Gene3D G3DSA:3.40.1390.10 7 108 1.0E-24 T 13-10-2018 Atc_0851 324bf6ab8edad0bc3899a01c80e545a5 360 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 34 99 1.9E-17 T 13-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 Atc_0851 324bf6ab8edad0bc3899a01c80e545a5 360 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 12 336 34.771 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Atc_1596 b0517d1369e845425614a11ac25fa46e 361 Pfam PF07680 TQO small subunit DoxA 237 336 2.9E-11 T 13-10-2018 IPR011636 Thiosulphate:quinone oxidoreductase small subunit DoxA KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 Atc_1596 b0517d1369e845425614a11ac25fa46e 361 PIRSF PIRSF037390 9 361 6.3E-101 T 13-10-2018 IPR017192 Thiosulphate:quinone oxidoreductase, fused subunit DoxA/ DoxD Atc_1596 b0517d1369e845425614a11ac25fa46e 361 Pfam PF04173 TQO small subunit DoxD 29 177 1.2E-28 T 13-10-2018 IPR007301 TQO small subunit DoxD KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 Atc_0696 dec47481c80e2f1bfc7db1277823464a 209 SUPERFAMILY SSF50715 6 197 1.01E-50 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Atc_0696 dec47481c80e2f1bfc7db1277823464a 209 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 6 191 27.975 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Atc_0696 dec47481c80e2f1bfc7db1277823464a 209 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 29 98 5.0E-12 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Atc_0696 dec47481c80e2f1bfc7db1277823464a 209 Pfam PF01386 Ribosomal L25p family 10 95 1.6E-23 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Atc_0696 dec47481c80e2f1bfc7db1277823464a 209 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 190 2.3E-24 T 13-10-2018 IPR020057 Ribosomal protein L25, beta domain Atc_0696 dec47481c80e2f1bfc7db1277823464a 209 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 10 187 3.3E-44 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Atc_0696 dec47481c80e2f1bfc7db1277823464a 209 Gene3D G3DSA:2.40.240.10 4 98 1.1E-26 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Atc_0696 dec47481c80e2f1bfc7db1277823464a 209 Gene3D G3DSA:2.170.120.20 101 198 5.9E-22 T 13-10-2018 IPR037121 Ribosomal protein L25, C-terminal Atc_0296 c8ab2a92e0344616d97577611992376d 252 Gene3D G3DSA:3.40.190.10 26 250 1.3E-81 T 13-10-2018 Atc_0296 c8ab2a92e0344616d97577611992376d 252 SUPERFAMILY SSF53850 22 251 4.97E-33 T 13-10-2018 Atc_0296 c8ab2a92e0344616d97577611992376d 252 Pfam PF13531 Bacterial extracellular solute-binding protein 25 251 8.9E-33 T 13-10-2018 Atc_0296 c8ab2a92e0344616d97577611992376d 252 Gene3D G3DSA:3.40.190.10 105 214 1.3E-81 T 13-10-2018 Atc_1770 f4fb87f5141dd73aa588009eefc4a036 178 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 74 111 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Atc_1770 f4fb87f5141dd73aa588009eefc4a036 178 Gene3D G3DSA:3.40.140.10 18 177 6.0E-48 T 13-10-2018 Atc_1770 f4fb87f5141dd73aa588009eefc4a036 178 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 28 170 42.39 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Atc_1770 f4fb87f5141dd73aa588009eefc4a036 178 Pfam PF14437 MafB19-like deaminase 23 169 1.2E-25 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Atc_1770 f4fb87f5141dd73aa588009eefc4a036 178 SUPERFAMILY SSF53927 22 170 7.19E-45 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Atc_2420 98e97a47e0b7b7e043203388878925f0 461 Pfam PF13384 Homeodomain-like domain 436 457 8.7E-6 T 13-10-2018 Atc_2420 98e97a47e0b7b7e043203388878925f0 461 SUPERFAMILY SSF55785 24 131 9.25E-15 T 13-10-2018 IPR035965 PAS domain superfamily Atc_2420 98e97a47e0b7b7e043203388878925f0 461 Gene3D G3DSA:3.40.50.300 141 322 4.7E-63 T 13-10-2018 Atc_2420 98e97a47e0b7b7e043203388878925f0 461 Gene3D G3DSA:1.10.8.60 323 399 6.6E-18 T 13-10-2018 Atc_2420 98e97a47e0b7b7e043203388878925f0 461 Pfam PF08448 PAS fold 36 128 9.0E-12 T 13-10-2018 IPR013656 PAS fold-4 Atc_2420 98e97a47e0b7b7e043203388878925f0 461 Gene3D G3DSA:3.30.450.20 17 132 8.6E-12 T 13-10-2018 Atc_2420 98e97a47e0b7b7e043203388878925f0 461 Pfam PF00158 Sigma-54 interaction domain 152 318 6.6E-64 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_2420 98e97a47e0b7b7e043203388878925f0 461 SMART SM00091 24 90 1.7E-4 T 13-10-2018 IPR000014 PAS domain Atc_2420 98e97a47e0b7b7e043203388878925f0 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 364 373 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_2420 98e97a47e0b7b7e043203388878925f0 461 SUPERFAMILY SSF46689 365 458 1.4E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_2420 98e97a47e0b7b7e043203388878925f0 461 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 74 9.0E-6 T 13-10-2018 IPR000014 PAS domain Atc_2420 98e97a47e0b7b7e043203388878925f0 461 SUPERFAMILY SSF52540 152 393 6.91E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2420 98e97a47e0b7b7e043203388878925f0 461 SMART SM00382 172 315 7.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0056 982b3af20d9cfaf809d36ab7238c39d9 715 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 265 3.5E-67 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Atc_0056 982b3af20d9cfaf809d36ab7238c39d9 715 SUPERFAMILY SSF52540 5 634 3.47E-172 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0056 982b3af20d9cfaf809d36ab7238c39d9 715 Gene3D G3DSA:1.10.10.160 110 183 4.0E-92 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily Atc_0056 982b3af20d9cfaf809d36ab7238c39d9 715 Gene3D G3DSA:3.40.50.300 275 628 4.4E-120 T 13-10-2018 Atc_0056 982b3af20d9cfaf809d36ab7238c39d9 715 Gene3D G3DSA:1.10.486.10 376 530 4.4E-120 T 13-10-2018 Atc_0056 982b3af20d9cfaf809d36ab7238c39d9 715 Gene3D G3DSA:3.40.50.300 7 268 4.0E-92 T 13-10-2018 Atc_0056 982b3af20d9cfaf809d36ab7238c39d9 715 Pfam PF13361 UvrD-like helicase C-terminal domain 271 608 3.0E-72 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Atc_1845 f569aac990996e647578a3827e9f00c1 439 Pfam PF13356 Arm DNA-binding domain 3 96 2.1E-7 T 13-10-2018 IPR025166 Integrase, DNA-binding domain Atc_1845 f569aac990996e647578a3827e9f00c1 439 Pfam PF00589 Phage integrase family 246 395 8.0E-9 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_1845 f569aac990996e647578a3827e9f00c1 439 Gene3D G3DSA:1.10.443.10 239 421 1.9E-11 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_1845 f569aac990996e647578a3827e9f00c1 439 SUPERFAMILY SSF56349 127 415 8.24E-31 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_1845 f569aac990996e647578a3827e9f00c1 439 Gene3D G3DSA:3.30.160.390 1 120 5.3E-6 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Atc_1845 f569aac990996e647578a3827e9f00c1 439 Gene3D G3DSA:1.10.150.130 121 224 2.2E-6 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 Gene3D G3DSA:1.20.1640.10 504 1013 9.6E-258 T 13-10-2018 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 SUPERFAMILY SSF82714 714 793 4.45E-14 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 Gene3D G3DSA:3.30.70.1430 40 807 9.6E-258 T 13-10-2018 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 Gene3D G3DSA:3.30.70.1320 134 329 9.6E-258 T 13-10-2018 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 SUPERFAMILY SSF82693 137 327 1.7E-19 T 13-10-2018 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 SUPERFAMILY SSF82693 43 132 9.42E-24 T 13-10-2018 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 SUPERFAMILY SSF82866 295 494 1.29E-44 T 13-10-2018 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 Gene3D G3DSA:3.30.2090.10 711 799 9.6E-258 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 SUPERFAMILY SSF82714 188 271 2.62E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 Pfam PF00873 AcrB/AcrD/AcrF family 5 1015 2.0E-240 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 SUPERFAMILY SSF82693 559 660 8.37E-6 T 13-10-2018 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 Gene3D G3DSA:3.30.2090.10 186 276 9.6E-258 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 SUPERFAMILY SSF82866 796 1019 1.7E-36 T 13-10-2018 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 Gene3D G3DSA:1.20.1640.10 10 503 9.6E-258 T 13-10-2018 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 Gene3D G3DSA:3.30.70.1430 562 660 9.6E-258 T 13-10-2018 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 Gene3D G3DSA:3.30.70.1440 661 857 9.6E-258 T 13-10-2018 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 5.3E-64 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 5.3E-64 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 5.3E-64 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 5.3E-64 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 5.3E-64 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.3E-64 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.3E-64 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1590 76247d7a8957cf5cac7b3bb73ed4644a 1038 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 5.3E-64 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2039 b15a1534e1f19b00da3438dc7eef6f82 460 Gene3D G3DSA:1.10.1200.160 396 436 8.2E-41 T 13-10-2018 Atc_2039 b15a1534e1f19b00da3438dc7eef6f82 460 Pfam PF03743 Bacterial conjugation TrbI-like protein 274 455 7.9E-46 T 13-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Atc_2039 b15a1534e1f19b00da3438dc7eef6f82 460 Gene3D G3DSA:2.40.128.260 277 455 8.2E-41 T 13-10-2018 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.7E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.7E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.7E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.7E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 564 1.5E-216 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 460 3.2E-51 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 Pfam PF03129 Anticodon binding domain 479 567 3.8E-11 T 13-10-2018 IPR004154 Anticodon-binding Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 Gene3D G3DSA:3.30.930.10 11 467 2.2E-232 T 13-10-2018 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 Pfam PF04073 Aminoacyl-tRNA editing domain 260 378 4.4E-27 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 Gene3D G3DSA:3.40.50.800 4 555 2.2E-232 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 SUPERFAMILY SSF55681 10 480 9.77E-107 T 13-10-2018 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 Gene3D G3DSA:3.90.960.10 240 390 2.2E-232 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 SUPERFAMILY SSF55826 218 389 4.06E-34 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 PIRSF PIRSF001535 1 570 2.2E-254 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 572 40.837 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Atc_0712 f9f77aa800b40b0fe1799a89e9e9256c 572 SUPERFAMILY SSF52954 466 568 5.56E-23 T 13-10-2018 Atc_0765 c2089b860bd747a30c1c5db8cb067a48 113 SUPERFAMILY SSF47413 20 74 7.42E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_0765 c2089b860bd747a30c1c5db8cb067a48 113 Gene3D G3DSA:1.10.260.40 14 85 7.6E-13 T 13-10-2018 Atc_0765 c2089b860bd747a30c1c5db8cb067a48 113 Pfam PF13560 Helix-turn-helix domain 21 75 9.7E-7 T 13-10-2018 Atc_1463 f10d9a1280b9349d533a64f04634d504 419 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 402 5.3E-88 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Atc_1463 f10d9a1280b9349d533a64f04634d504 419 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 341 419 1.5E-16 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Atc_1463 f10d9a1280b9349d533a64f04634d504 419 Pfam PF00460 Flagella basal body rod protein 4 34 1.5E-8 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Atc_1463 f10d9a1280b9349d533a64f04634d504 419 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Atc_1463 f10d9a1280b9349d533a64f04634d504 419 Gene3D G3DSA:2.60.98.20 151 302 1.0E-25 T 13-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Atc_1463 f10d9a1280b9349d533a64f04634d504 419 Pfam PF07559 Flagellar basal body protein FlaE 178 301 6.1E-22 T 13-10-2018 IPR011491 Flagellar hook protein FlgE Atc_1463 f10d9a1280b9349d533a64f04634d504 419 SUPERFAMILY SSF117143 82 381 3.53E-68 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Atc_0612 b06eaa22d20db90d6c38e1c98f3958f5 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 7.4E-42 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0612 b06eaa22d20db90d6c38e1c98f3958f5 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 7.4E-42 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0612 b06eaa22d20db90d6c38e1c98f3958f5 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 7.4E-42 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0612 b06eaa22d20db90d6c38e1c98f3958f5 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 7.4E-42 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0612 b06eaa22d20db90d6c38e1c98f3958f5 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.4E-49 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Atc_0612 b06eaa22d20db90d6c38e1c98f3958f5 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0612 b06eaa22d20db90d6c38e1c98f3958f5 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.1E-60 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0612 b06eaa22d20db90d6c38e1c98f3958f5 138 Gene3D G3DSA:3.90.1170.10 1 137 9.8E-57 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Atc_0612 b06eaa22d20db90d6c38e1c98f3958f5 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.526 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0612 b06eaa22d20db90d6c38e1c98f3958f5 138 SUPERFAMILY SSF54686 1 135 4.71E-56 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Atc_0612 b06eaa22d20db90d6c38e1c98f3958f5 138 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_1135 9e15776f6de99878d5bf9ad8736269d7 301 Pfam PF01420 Type I restriction modification DNA specificity domain 93 259 6.6E-15 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Atc_1135 9e15776f6de99878d5bf9ad8736269d7 301 SUPERFAMILY SSF116734 6 78 1.34E-12 T 13-10-2018 Atc_1135 9e15776f6de99878d5bf9ad8736269d7 301 Gene3D G3DSA:3.90.220.20 1 74 2.3E-9 T 13-10-2018 Atc_1135 9e15776f6de99878d5bf9ad8736269d7 301 Gene3D G3DSA:3.90.220.20 81 291 1.4E-32 T 13-10-2018 Atc_1135 9e15776f6de99878d5bf9ad8736269d7 301 SUPERFAMILY SSF116734 77 299 2.62E-45 T 13-10-2018 Atc_2594 ca4fcaf95689cd5cae788ed9d75a4c4c 401 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 7 358 9.2E-106 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Atc_2594 ca4fcaf95689cd5cae788ed9d75a4c4c 401 SUPERFAMILY SSF52440 2 98 4.03E-22 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atc_2594 ca4fcaf95689cd5cae788ed9d75a4c4c 401 Gene3D G3DSA:3.30.1490.20 106 179 2.4E-19 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atc_2594 ca4fcaf95689cd5cae788ed9d75a4c4c 401 Gene3D G3DSA:3.40.50.20 1 105 5.2E-32 T 13-10-2018 Atc_2594 ca4fcaf95689cd5cae788ed9d75a4c4c 401 SUPERFAMILY SSF56059 101 299 4.24E-53 T 13-10-2018 Atc_2594 ca4fcaf95689cd5cae788ed9d75a4c4c 401 Gene3D G3DSA:3.30.470.20 180 372 2.3E-67 T 13-10-2018 Atc_2594 ca4fcaf95689cd5cae788ed9d75a4c4c 401 Pfam PF02222 ATP-grasp domain 110 278 2.9E-47 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Atc_2594 ca4fcaf95689cd5cae788ed9d75a4c4c 401 SUPERFAMILY SSF51246 303 369 1.73E-14 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atc_2594 ca4fcaf95689cd5cae788ed9d75a4c4c 401 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 7 357 37.948 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Atc_2459 391fd055813bfb55816185bb91fe01b7 436 SUPERFAMILY SSF63411 236 400 2.83E-28 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Atc_2459 391fd055813bfb55816185bb91fe01b7 436 Gene3D G3DSA:3.30.830.10 230 403 6.6E-31 T 13-10-2018 Atc_2459 391fd055813bfb55816185bb91fe01b7 436 SUPERFAMILY SSF63411 9 212 7.52E-43 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Atc_2459 391fd055813bfb55816185bb91fe01b7 436 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 41 64 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Atc_2459 391fd055813bfb55816185bb91fe01b7 436 Gene3D G3DSA:3.30.830.10 11 223 3.0E-48 T 13-10-2018 Atc_2459 391fd055813bfb55816185bb91fe01b7 436 Pfam PF05193 Peptidase M16 inactive domain 176 345 1.1E-19 T 13-10-2018 IPR007863 Peptidase M16, C-terminal Atc_2459 391fd055813bfb55816185bb91fe01b7 436 Pfam PF00675 Insulinase (Peptidase family M16) 22 164 1.8E-27 T 13-10-2018 IPR011765 Peptidase M16, N-terminal Atc_0336 15e8e7dcf22b716d0ee052e31eddb9d4 270 SUPERFAMILY SSF52540 4 266 1.05E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0336 15e8e7dcf22b716d0ee052e31eddb9d4 270 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 1 194 5.2E-64 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Atc_0336 15e8e7dcf22b716d0ee052e31eddb9d4 270 PRINTS PR00478 Phosphoribulokinase family signature 144 161 1.3E-24 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Atc_0336 15e8e7dcf22b716d0ee052e31eddb9d4 270 PRINTS PR00478 Phosphoribulokinase family signature 106 124 1.3E-24 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Atc_0336 15e8e7dcf22b716d0ee052e31eddb9d4 270 PRINTS PR00478 Phosphoribulokinase family signature 162 185 1.3E-24 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Atc_0336 15e8e7dcf22b716d0ee052e31eddb9d4 270 ProSitePatterns PS00567 Phosphoribulokinase signature. 144 157 - T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Atc_0336 15e8e7dcf22b716d0ee052e31eddb9d4 270 Gene3D G3DSA:3.40.50.300 1 269 2.1E-105 T 13-10-2018 Atc_2469 01efddd7061c6f5ad39b9a92bad84beb 282 Pfam PF00005 ABC transporter 10 147 7.8E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_2469 01efddd7061c6f5ad39b9a92bad84beb 282 SUPERFAMILY SSF52540 2 210 2.66E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2469 01efddd7061c6f5ad39b9a92bad84beb 282 SMART SM00382 19 199 1.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2469 01efddd7061c6f5ad39b9a92bad84beb 282 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_2469 01efddd7061c6f5ad39b9a92bad84beb 282 Gene3D G3DSA:3.40.50.300 1 213 1.3E-48 T 13-10-2018 Atc_0038 7a02b2bd10acd5c43d7bf63445b0496d 252 SMART SM00382 98 236 9.8E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0038 7a02b2bd10acd5c43d7bf63445b0496d 252 Gene3D G3DSA:3.40.50.300 62 244 2.0E-45 T 13-10-2018 Atc_0038 7a02b2bd10acd5c43d7bf63445b0496d 252 Pfam PF08483 IstB-like ATP binding N-terminal 24 52 3.9E-10 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal Atc_0038 7a02b2bd10acd5c43d7bf63445b0496d 252 PIRSF PIRSF003073 1 249 1.9E-72 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_0038 7a02b2bd10acd5c43d7bf63445b0496d 252 SUPERFAMILY SSF52540 65 237 2.87E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0038 7a02b2bd10acd5c43d7bf63445b0496d 252 Pfam PF01695 IstB-like ATP binding protein 53 229 1.4E-64 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_2105 7a02b2bd10acd5c43d7bf63445b0496d 252 SMART SM00382 98 236 9.8E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2105 7a02b2bd10acd5c43d7bf63445b0496d 252 Gene3D G3DSA:3.40.50.300 62 244 2.0E-45 T 13-10-2018 Atc_2105 7a02b2bd10acd5c43d7bf63445b0496d 252 Pfam PF08483 IstB-like ATP binding N-terminal 24 52 3.9E-10 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal Atc_2105 7a02b2bd10acd5c43d7bf63445b0496d 252 PIRSF PIRSF003073 1 249 1.9E-72 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_2105 7a02b2bd10acd5c43d7bf63445b0496d 252 SUPERFAMILY SSF52540 65 237 2.87E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2105 7a02b2bd10acd5c43d7bf63445b0496d 252 Pfam PF01695 IstB-like ATP binding protein 53 229 1.4E-64 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 Pfam PF12705 PD-(D/E)XK nuclease superfamily 963 1158 2.5E-6 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 Gene3D G3DSA:1.10.3170.10 156 363 4.8E-115 T 13-10-2018 Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 Gene3D G3DSA:3.40.50.300 463 863 1.8E-115 T 13-10-2018 Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 Gene3D G3DSA:1.10.486.10 606 751 1.8E-115 T 13-10-2018 Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 Pfam PF13361 UvrD-like helicase C-terminal domain 690 838 8.2E-14 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 SUPERFAMILY SSF52540 11 842 4.83E-101 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 Gene3D G3DSA:3.90.320.10 909 1185 2.2E-62 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 Gene3D G3DSA:3.40.50.300 5 453 4.8E-115 T 13-10-2018 Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 3 1183 19.502 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 158 5.1E-24 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 Pfam PF00580 UvrD/REP helicase N-terminal domain 338 453 5.0E-26 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 SUPERFAMILY SSF52980 916 1181 3.0E-53 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Atc_0256 c3bd585d3e1c68e6cce639b91e2195e5 1185 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 5 1179 2.1E-235 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 Gene3D G3DSA:3.40.50.300 573 838 1.9E-99 T 13-10-2018 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 SUPERFAMILY SSF53150 119 268 3.27E-17 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 12 847 6.9E-276 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 SMART SM00533 285 592 5.6E-72 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 SUPERFAMILY SSF48334 271 564 2.09E-65 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 Gene3D G3DSA:3.30.420.110 134 264 5.0E-12 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 Pfam PF01624 MutS domain I 13 124 1.0E-39 T 13-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 SUPERFAMILY SSF52540 568 796 5.04E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 SUPERFAMILY SSF55271 7 120 1.15E-40 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 Pfam PF05190 MutS family domain IV 429 519 1.0E-22 T 13-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 Gene3D G3DSA:3.40.1170.10 4 126 1.1E-48 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 Pfam PF05188 MutS domain II 135 253 2.0E-4 T 13-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 Pfam PF00488 MutS domain V 612 795 2.5E-80 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 689 705 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 PIRSF PIRSF037677 215 830 3.5E-118 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 PIRSF PIRSF037677 5 184 8.0E-28 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 Gene3D G3DSA:1.10.1420.10 388 504 1.1E-75 T 13-10-2018 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 12 842 22.04 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 Pfam PF05192 MutS domain III 274 560 1.9E-27 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 SMART SM00534 608 792 4.9E-117 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Atc_1502 0b8fc565420593e6a8044c5f75d5510b 853 Gene3D G3DSA:1.10.1420.10 270 560 1.1E-75 T 13-10-2018 Atc_0785 a5cfc7d7d66ac32623d6049865102acc 692 Pfam PF04932 O-Antigen ligase 210 350 1.4E-11 T 13-10-2018 IPR007016 O-antigen ligase-related Atc_0785 a5cfc7d7d66ac32623d6049865102acc 692 Gene3D G3DSA:1.25.40.10 493 685 9.3E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0391 53ca1f8677e8f2544913a83917216407 294 Pfam PF00483 Nucleotidyl transferase 3 238 4.9E-64 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Atc_0391 53ca1f8677e8f2544913a83917216407 294 Gene3D G3DSA:3.90.550.10 1 291 2.3E-78 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0391 53ca1f8677e8f2544913a83917216407 294 SUPERFAMILY SSF53448 2 288 6.53E-85 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0391 53ca1f8677e8f2544913a83917216407 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 3 287 9.6E-145 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 SUPERFAMILY SSF51905 3 258 1.21E-47 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 Pfam PF13932 GidA associated domain 399 612 1.7E-72 T 13-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 Pfam PF01134 Glucose inhibited division protein A 6 396 1.1E-162 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 620 41.886 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 Gene3D G3DSA:1.10.10.1800 456 546 3.2E-15 T 13-10-2018 Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 618 7.2E-259 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 SMART SM01228 542 613 9.2E-38 T 13-10-2018 Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 Gene3D G3DSA:1.10.150.570 565 618 2.1E-22 T 13-10-2018 Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 Gene3D G3DSA:3.50.50.60 1 220 1.5E-89 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0022 3bd718e5c7c7db4a04af1ce2a49bdb56 624 Gene3D G3DSA:3.50.50.60 293 455 1.4E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2777 ae5c45b50e5906042c1fa9d0a5c0dc53 200 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 10 198 20.689 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Atc_2777 ae5c45b50e5906042c1fa9d0a5c0dc53 200 Pfam PF02660 Glycerol-3-phosphate acyltransferase 14 189 4.3E-51 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Atc_2777 ae5c45b50e5906042c1fa9d0a5c0dc53 200 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 9 195 5.6E-59 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Atc_2777 ae5c45b50e5906042c1fa9d0a5c0dc53 200 SMART SM01207 13 190 2.4E-80 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Atc_m229 5ca6986a2b6b8ddb776296638b44c126 379 Pfam PF07724 AAA domain (Cdc48 subfamily) 42 211 3.7E-21 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atc_m229 5ca6986a2b6b8ddb776296638b44c126 379 Gene3D G3DSA:3.40.50.300 7 216 1.5E-49 T 13-10-2018 Atc_m229 5ca6986a2b6b8ddb776296638b44c126 379 SUPERFAMILY SSF52540 13 293 2.16E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m229 5ca6986a2b6b8ddb776296638b44c126 379 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 155 169 1.1E-21 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_m229 5ca6986a2b6b8ddb776296638b44c126 379 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 91 109 1.1E-21 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_m229 5ca6986a2b6b8ddb776296638b44c126 379 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 46 64 1.1E-21 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_m229 5ca6986a2b6b8ddb776296638b44c126 379 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 121 139 1.1E-21 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_m229 5ca6986a2b6b8ddb776296638b44c126 379 SMART SM00382 42 187 3.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0988 e40b285e8a708f89da90e6442d28a720 245 Gene3D G3DSA:3.40.109.10 1 245 2.2E-72 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atc_0988 e40b285e8a708f89da90e6442d28a720 245 SUPERFAMILY SSF55469 1 244 1.44E-68 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atc_0988 e40b285e8a708f89da90e6442d28a720 245 Pfam PF00881 Nitroreductase family 9 163 4.7E-20 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Atc_0988 e40b285e8a708f89da90e6442d28a720 245 PIRSF PIRSF005426 1 245 2.7E-84 T 13-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 Atc_0882 b423a6f0567e271dd98083388a277bfa 501 PRINTS PR01806 Virulence factor MviN signature 250 276 2.5E-74 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atc_0882 b423a6f0567e271dd98083388a277bfa 501 PRINTS PR01806 Virulence factor MviN signature 24 43 2.5E-74 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atc_0882 b423a6f0567e271dd98083388a277bfa 501 PRINTS PR01806 Virulence factor MviN signature 124 148 2.5E-74 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atc_0882 b423a6f0567e271dd98083388a277bfa 501 PRINTS PR01806 Virulence factor MviN signature 347 366 2.5E-74 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atc_0882 b423a6f0567e271dd98083388a277bfa 501 PRINTS PR01806 Virulence factor MviN signature 148 169 2.5E-74 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atc_0882 b423a6f0567e271dd98083388a277bfa 501 PRINTS PR01806 Virulence factor MviN signature 43 59 2.5E-74 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atc_0882 b423a6f0567e271dd98083388a277bfa 501 PRINTS PR01806 Virulence factor MviN signature 399 416 2.5E-74 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atc_0882 b423a6f0567e271dd98083388a277bfa 501 PIRSF PIRSF002869 1 500 2.5E-159 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atc_0882 b423a6f0567e271dd98083388a277bfa 501 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 499 2.4E-142 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atc_0882 b423a6f0567e271dd98083388a277bfa 501 Pfam PF03023 MviN-like protein 19 459 4.3E-135 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atc_0882 b423a6f0567e271dd98083388a277bfa 501 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 457 19.498 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atc_2878 5f60772d78fd2a9e3ca061c105dcd4a8 131 Gene3D G3DSA:3.30.428.10 1 131 1.5E-32 T 13-10-2018 IPR036265 HIT-like superfamily Atc_2878 5f60772d78fd2a9e3ca061c105dcd4a8 131 SUPERFAMILY SSF54197 3 130 1.21E-31 T 13-10-2018 IPR036265 HIT-like superfamily Atc_2878 5f60772d78fd2a9e3ca061c105dcd4a8 131 PRINTS PR00332 Histidine triad family signature 25 43 2.2E-15 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Atc_2878 5f60772d78fd2a9e3ca061c105dcd4a8 131 PRINTS PR00332 Histidine triad family signature 87 97 2.2E-15 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Atc_2878 5f60772d78fd2a9e3ca061c105dcd4a8 131 PRINTS PR00332 Histidine triad family signature 4 20 2.2E-15 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Atc_2878 5f60772d78fd2a9e3ca061c105dcd4a8 131 Pfam PF01230 HIT domain 11 99 1.9E-17 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Atc_0447 d8c15c2deb08837baf1cf3df6fc43572 485 PIRSF PIRSF006446 5 467 1.5E-127 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_0447 d8c15c2deb08837baf1cf3df6fc43572 485 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 11 446 1.7E-136 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_2226 38cee093ff0c1ed9a94ec73cd26e3afb 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 144 158 - T 13-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Atc_2226 38cee093ff0c1ed9a94ec73cd26e3afb 477 Gene3D G3DSA:1.10.150.380 296 412 3.9E-37 T 13-10-2018 Atc_2226 38cee093ff0c1ed9a94ec73cd26e3afb 477 SUPERFAMILY SSF89095 296 400 7.59E-34 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Atc_2226 38cee093ff0c1ed9a94ec73cd26e3afb 477 Pfam PF02637 GatB domain 329 473 7.5E-55 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Atc_2226 38cee093ff0c1ed9a94ec73cd26e3afb 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 3 473 1.3E-182 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Atc_2226 38cee093ff0c1ed9a94ec73cd26e3afb 477 SMART SM00845 327 473 1.9E-81 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Atc_2226 38cee093ff0c1ed9a94ec73cd26e3afb 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 474 39.257 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Atc_2226 38cee093ff0c1ed9a94ec73cd26e3afb 477 Gene3D G3DSA:1.10.10.410 413 475 8.2E-27 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Atc_2226 38cee093ff0c1ed9a94ec73cd26e3afb 477 SUPERFAMILY SSF55931 4 295 8.5E-121 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atc_2226 38cee093ff0c1ed9a94ec73cd26e3afb 477 Pfam PF02934 GatB/GatE catalytic domain 5 287 2.2E-115 T 13-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Atc_0847 ae6e79369f6f3f3c5ac92af259b83ff9 381 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 373 8.2E-148 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atc_0847 ae6e79369f6f3f3c5ac92af259b83ff9 381 SUPERFAMILY SSF51735 1 145 6.56E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0847 ae6e79369f6f3f3c5ac92af259b83ff9 381 Gene3D G3DSA:3.40.50.720 1 145 4.7E-45 T 13-10-2018 Atc_0847 ae6e79369f6f3f3c5ac92af259b83ff9 381 Gene3D G3DSA:1.10.1740.10 295 379 1.3E-27 T 13-10-2018 Atc_0847 ae6e79369f6f3f3c5ac92af259b83ff9 381 SUPERFAMILY SSF55347 121 257 6.87E-63 T 13-10-2018 Atc_0847 ae6e79369f6f3f3c5ac92af259b83ff9 381 Pfam PF13288 DXP reductoisomerase C-terminal domain 254 370 9.9E-41 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atc_0847 ae6e79369f6f3f3c5ac92af259b83ff9 381 PIRSF PIRSF006205 1 379 5.0E-145 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atc_0847 ae6e79369f6f3f3c5ac92af259b83ff9 381 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 127 1.9E-38 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atc_0847 ae6e79369f6f3f3c5ac92af259b83ff9 381 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 375 43.918 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atc_0847 ae6e79369f6f3f3c5ac92af259b83ff9 381 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 141 222 3.0E-40 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atc_0847 ae6e79369f6f3f3c5ac92af259b83ff9 381 SUPERFAMILY SSF69055 287 374 3.01E-29 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 Gene3D G3DSA:3.90.600.10 323 415 1.4E-32 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 283 290 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 SUPERFAMILY SSF56059 105 319 9.9E-54 T 13-10-2018 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 2 415 39.38 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 3 103 5.2E-34 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 SMART SM01209 104 289 1.1E-105 T 13-10-2018 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 Gene3D G3DSA:3.30.470.20 185 322 7.4E-47 T 13-10-2018 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 104 289 4.2E-61 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 324 413 8.3E-29 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 Gene3D G3DSA:3.30.1490.20 122 184 1.1E-16 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 SUPERFAMILY SSF52440 3 104 6.47E-35 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 SMART SM01210 323 415 6.8E-51 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 3 414 1.9E-146 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 Gene3D G3DSA:3.40.50.20 3 96 9.0E-37 T 13-10-2018 Atc_0691 5ade1eac66de5de7ae908e9a4a491e94 416 SUPERFAMILY SSF51246 322 414 5.76E-30 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atc_2503 fbea8b31552e5e1ff79e0fa2a4e80b58 268 Gene3D G3DSA:3.40.50.720 4 259 2.3E-88 T 13-10-2018 Atc_2503 fbea8b31552e5e1ff79e0fa2a4e80b58 268 SUPERFAMILY SSF55347 122 231 1.07E-30 T 13-10-2018 Atc_2503 fbea8b31552e5e1ff79e0fa2a4e80b58 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 123 259 1.8E-38 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2503 fbea8b31552e5e1ff79e0fa2a4e80b58 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 260 28.467 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2503 fbea8b31552e5e1ff79e0fa2a4e80b58 268 PIRSF PIRSF000161 3 263 5.8E-73 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2503 fbea8b31552e5e1ff79e0fa2a4e80b58 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 120 3.0E-28 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2503 fbea8b31552e5e1ff79e0fa2a4e80b58 268 SUPERFAMILY SSF51735 4 261 4.91E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2503 fbea8b31552e5e1ff79e0fa2a4e80b58 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 145 162 - T 13-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2503 fbea8b31552e5e1ff79e0fa2a4e80b58 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 260 9.5E-78 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2503 fbea8b31552e5e1ff79e0fa2a4e80b58 268 Gene3D G3DSA:3.30.360.10 122 229 2.3E-88 T 13-10-2018 Atc_2210 b8940b027e165c7a675335d0d2a29229 288 PIRSF PIRSF038455 1 288 6.4E-78 T 13-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Atc_2210 b8940b027e165c7a675335d0d2a29229 288 Gene3D G3DSA:1.10.760.10 84 168 9.7E-61 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_2210 b8940b027e165c7a675335d0d2a29229 288 Gene3D G3DSA:1.10.760.10 71 287 9.7E-61 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_2210 b8940b027e165c7a675335d0d2a29229 288 SUPERFAMILY SSF46626 59 173 1.79E-17 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_2210 b8940b027e165c7a675335d0d2a29229 288 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 82 287 1.6E-66 T 13-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Atc_2210 b8940b027e165c7a675335d0d2a29229 288 SUPERFAMILY SSF46626 178 288 2.83E-28 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 264 277 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 488 505 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 SUPERFAMILY SSF53697 7 538 2.97E-197 T 13-10-2018 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 45 515 39.985 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 149 168 6.0E-51 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 488 501 6.0E-51 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 260 278 6.0E-51 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 474 488 6.0E-51 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 337 358 6.0E-51 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 474 6.0E-51 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 Gene3D G3DSA:3.40.50.10490 12 497 3.6E-218 T 13-10-2018 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 Pfam PF00342 Phosphoglucose isomerase 51 530 2.4E-200 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 Gene3D G3DSA:1.10.1390.10 498 538 2.4E-16 T 13-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0449 ba67b877a75d98d87a8171f05924363e 540 Gene3D G3DSA:3.40.50.10490 97 290 3.6E-218 T 13-10-2018 Atc_2703 60a72d6ebf75ff30407232fa5c63ac31 133 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 117 31.877 T 13-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Atc_2703 60a72d6ebf75ff30407232fa5c63ac31 133 Gene3D G3DSA:3.30.160.750 63 128 9.6E-27 T 13-10-2018 Atc_2703 60a72d6ebf75ff30407232fa5c63ac31 133 Pfam PF02675 S-adenosylmethionine decarboxylase 8 113 6.5E-40 T 13-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Atc_2703 60a72d6ebf75ff30407232fa5c63ac31 133 SUPERFAMILY SSF56276 3 116 1.29E-43 T 13-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Atc_2703 60a72d6ebf75ff30407232fa5c63ac31 133 Gene3D G3DSA:3.30.360.110 1 62 8.9E-26 T 13-10-2018 Atc_2703 60a72d6ebf75ff30407232fa5c63ac31 133 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 113 1.7E-46 T 13-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Atc_1778 7ba9e15aff856c05e6c6fad37b618984 275 SUPERFAMILY SSF69796 30 263 6.41E-49 T 13-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Atc_1778 7ba9e15aff856c05e6c6fad37b618984 275 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 40 257 3.2E-40 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Atc_1778 7ba9e15aff856c05e6c6fad37b618984 275 Pfam PF02511 Thymidylate synthase complementing protein 37 253 9.0E-51 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Atc_1778 7ba9e15aff856c05e6c6fad37b618984 275 Gene3D G3DSA:3.30.1360.170 24 268 1.3E-53 T 13-10-2018 Atc_2500 e58d0fab73da9d8bae0d30017c057d78 190 SUPERFAMILY SSF51283 5 189 5.89E-51 T 13-10-2018 IPR036157 dUTPase-like superfamily Atc_2500 e58d0fab73da9d8bae0d30017c057d78 190 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 7 189 6.3E-49 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Atc_2500 e58d0fab73da9d8bae0d30017c057d78 190 Pfam PF00692 dUTPase 82 186 1.1E-6 T 13-10-2018 IPR029054 dUTPase-like Atc_2500 e58d0fab73da9d8bae0d30017c057d78 190 Hamap MF_00146 dCTP deaminase [dcd]. 3 190 28.732 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Atc_2500 e58d0fab73da9d8bae0d30017c057d78 190 Gene3D G3DSA:2.70.40.10 1 161 4.0E-52 T 13-10-2018 IPR036157 dUTPase-like superfamily Atc_2473 d76bcc3608a2f83efde550b594e8b66f 75 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 68 6.4E-10 T 13-10-2018 IPR009778 Modulator of Rho-dependent transcription termination Atc_2473 d76bcc3608a2f83efde550b594e8b66f 75 Gene3D G3DSA:2.30.30.400 10 74 1.9E-9 T 13-10-2018 IPR038626 Rof-like superfamily Atc_2473 d76bcc3608a2f83efde550b594e8b66f 75 SUPERFAMILY SSF101744 5 65 5.18E-13 T 13-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 67 505 9.5E-118 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 301 355 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 SUPERFAMILY SSF81442 54 578 2.09E-150 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 145 169 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 219 237 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 248 267 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 299 320 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 481 502 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 58 83 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 118 141 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 187 199 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 345 360 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 369 390 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 432 451 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 PRINTS PR01165 Cytochrome c oxidase subunit I signature 404 422 7.0E-76 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2221 3a56f34152a590ab6ed5f3fa96fc887f 712 Gene3D G3DSA:1.20.210.10 54 581 4.0E-161 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2556 b9139cb3e3ddbadfc9c1d83d96d35781 121 Pfam PF00453 Ribosomal protein L20 3 109 5.9E-48 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2556 b9139cb3e3ddbadfc9c1d83d96d35781 121 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.918 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2556 b9139cb3e3ddbadfc9c1d83d96d35781 121 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.8E-49 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2556 b9139cb3e3ddbadfc9c1d83d96d35781 121 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 6.0E-15 T 13-10-2018 Atc_2556 b9139cb3e3ddbadfc9c1d83d96d35781 121 SUPERFAMILY SSF74731 2 115 4.84E-49 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2556 b9139cb3e3ddbadfc9c1d83d96d35781 121 Gene3D G3DSA:1.10.720.90 2 55 8.4E-26 T 13-10-2018 Atc_2556 b9139cb3e3ddbadfc9c1d83d96d35781 121 Gene3D G3DSA:1.10.1900.20 56 119 3.0E-28 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2556 b9139cb3e3ddbadfc9c1d83d96d35781 121 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.9E-39 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2556 b9139cb3e3ddbadfc9c1d83d96d35781 121 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.9E-39 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2556 b9139cb3e3ddbadfc9c1d83d96d35781 121 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.9E-39 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2556 b9139cb3e3ddbadfc9c1d83d96d35781 121 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_1516 dce32ad548471038015310bda105af84 270 SUPERFAMILY SSF51206 53 187 1.57E-26 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Atc_1516 dce32ad548471038015310bda105af84 270 Pfam PF13545 Crp-like helix-turn-helix domain 196 266 8.1E-18 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_1516 dce32ad548471038015310bda105af84 270 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 218 234 6.3E-6 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_1516 dce32ad548471038015310bda105af84 270 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 234 249 6.3E-6 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_1516 dce32ad548471038015310bda105af84 270 Gene3D G3DSA:1.10.10.10 191 267 1.6E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1516 dce32ad548471038015310bda105af84 270 SUPERFAMILY SSF46785 193 269 7.94E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1516 dce32ad548471038015310bda105af84 270 SMART SM00100 58 176 5.2E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Atc_1516 dce32ad548471038015310bda105af84 270 Gene3D G3DSA:2.60.120.10 47 190 7.8E-31 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_1516 dce32ad548471038015310bda105af84 270 SMART SM00419 212 260 2.2E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_1516 dce32ad548471038015310bda105af84 270 Pfam PF00027 Cyclic nucleotide-binding domain 78 155 4.1E-12 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 11 1289 0.0 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 Gene3D G3DSA:3.30.1330.10 224 424 8.1E-38 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 SUPERFAMILY SSF55326 231 428 4.19E-52 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 Gene3D G3DSA:3.30.1330.10 628 814 2.6E-21 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 SUPERFAMILY SSF55326 631 822 1.12E-62 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1288 2.1E-94 T 13-10-2018 Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 SMART SM01211 1040 1290 7.2E-136 T 13-10-2018 Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 Gene3D G3DSA:1.10.8.750 163 223 2.8E-18 T 13-10-2018 Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 SUPERFAMILY SSF109736 166 230 1.83E-16 T 13-10-2018 Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 Pfam PF02769 AIR synthase related protein, C-terminal domain 439 595 2.6E-28 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 Pfam PF02769 AIR synthase related protein, C-terminal domain 842 964 4.0E-11 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 Gene3D G3DSA:3.40.50.880 986 1290 8.3E-114 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 SUPERFAMILY SSF56042 828 1013 5.68E-38 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 9 1291 18.989 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 Gene3D G3DSA:3.90.650.10 817 985 4.9E-22 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 Gene3D G3DSA:3.90.650.10 425 610 3.8E-54 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 SUPERFAMILY SSF82697 10 162 7.32E-38 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 SUPERFAMILY SSF52317 1039 1290 2.62E-88 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_2198 ee4ee3cb8292d156492e21072542b0ac 1291 SUPERFAMILY SSF56042 438 661 1.24E-47 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 SUPERFAMILY SSF52317 2 226 5.18E-57 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.3E-6 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 2.3E-6 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 2.3E-6 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 SUPERFAMILY SSF52402 186 406 1.92E-56 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 Gene3D G3DSA:3.40.50.880 1 194 2.9E-52 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 PRINTS PR00097 Anthranilate synthase component II signature 5 19 4.5E-6 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 PRINTS PR00097 Anthranilate synthase component II signature 166 179 4.5E-6 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 PRINTS PR00097 Anthranilate synthase component II signature 49 58 4.5E-6 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 PRINTS PR00097 Anthranilate synthase component II signature 76 87 4.5E-6 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 Gene3D G3DSA:3.40.50.620 198 393 2.9E-76 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 Gene3D G3DSA:3.30.300.10 394 513 2.6E-54 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 Pfam PF00117 Glutamine amidotransferase class-I 7 187 8.3E-36 T 13-10-2018 IPR017926 Glutamine amidotransferase Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 193 3.3E-70 T 13-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 Pfam PF00958 GMP synthase C terminal domain 421 512 2.0E-45 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 SUPERFAMILY SSF54810 393 513 7.32E-52 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 513 54.04 T 13-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 46 60 2.4E-5 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 76 92 2.4E-5 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 5 19 2.4E-5 T 13-10-2018 Atc_1515 e703a24f082e21db49b1b397a5b5aad8 513 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 204 513 5.8E-150 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Atc_2769 141305142482ef5413700cbdf911bc21 325 Gene3D G3DSA:1.10.10.10 10 99 9.5E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2769 141305142482ef5413700cbdf911bc21 325 SUPERFAMILY SSF53850 99 303 1.13E-38 T 13-10-2018 Atc_2769 141305142482ef5413700cbdf911bc21 325 SUPERFAMILY SSF46785 8 122 2.99E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_2769 141305142482ef5413700cbdf911bc21 325 Gene3D G3DSA:3.40.190.10 174 279 2.6E-73 T 13-10-2018 Atc_2769 141305142482ef5413700cbdf911bc21 325 Pfam PF03466 LysR substrate binding domain 98 304 4.6E-40 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_2769 141305142482ef5413700cbdf911bc21 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 73 1.7E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2769 141305142482ef5413700cbdf911bc21 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2769 141305142482ef5413700cbdf911bc21 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2769 141305142482ef5413700cbdf911bc21 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2769 141305142482ef5413700cbdf911bc21 325 Gene3D G3DSA:3.40.190.10 100 301 2.6E-73 T 13-10-2018 Atc_m210 bffd16b1546247937b0758787eb8b795 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_m210 bffd16b1546247937b0758787eb8b795 425 SUPERFAMILY SSF53383 3 421 4.38E-116 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_m210 bffd16b1546247937b0758787eb8b795 425 Gene3D G3DSA:3.40.640.10 48 327 4.2E-141 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_m210 bffd16b1546247937b0758787eb8b795 425 Gene3D G3DSA:3.90.1150.10 12 415 4.2E-141 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_m210 bffd16b1546247937b0758787eb8b795 425 PIRSF PIRSF000521 6 130 1.5E-5 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_m210 bffd16b1546247937b0758787eb8b795 425 PIRSF PIRSF000521 181 424 4.4E-17 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_m210 bffd16b1546247937b0758787eb8b795 425 Pfam PF00202 Aminotransferase class-III 12 421 1.2E-91 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 5.2E-78 T 13-10-2018 IPR028053 Membrane insertase YidC, N-terminal Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 2.5E-23 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 2.5E-23 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 PRINTS PR01900 YidC translocation/secretion protein signature 487 511 2.5E-23 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 Pfam PF14849 YidC periplasmic domain 87 341 2.2E-54 T 13-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 534 22.012 T 13-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 PRINTS PR00701 60kDa inner membrane protein signature 498 521 1.2E-58 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 PRINTS PR00701 60kDa inner membrane protein signature 91 112 1.2E-58 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 PRINTS PR00701 60kDa inner membrane protein signature 324 344 1.2E-58 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.2E-58 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 PRINTS PR00701 60kDa inner membrane protein signature 462 484 1.2E-58 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 PRINTS PR00701 60kDa inner membrane protein signature 252 267 1.2E-58 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 PRINTS PR00701 60kDa inner membrane protein signature 415 438 1.2E-58 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 Pfam PF02096 60Kd inner membrane protein 354 532 6.5E-58 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 532 8.5E-68 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2830 4e601dcaa619a140b048c7866ae2f3fb 538 Gene3D G3DSA:2.70.98.90 82 333 7.4E-47 T 13-10-2018 IPR038221 YidC, periplasmic domain superfamily Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 Gene3D G3DSA:3.40.50.300 163 352 1.5E-68 T 13-10-2018 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 Gene3D G3DSA:1.10.1780.10 1 142 1.5E-38 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 SUPERFAMILY SSF52540 165 418 4.43E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 299 311 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 Gene3D G3DSA:1.10.8.60 652 746 4.7E-27 T 13-10-2018 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 5.4E-14 T 13-10-2018 IPR004176 Clp, N-terminal Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 SMART SM01086 652 741 6.3E-32 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 SUPERFAMILY SSF52540 436 739 6.59E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 730 9.2E-24 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 Gene3D G3DSA:1.10.8.60 353 435 1.1E-30 T 13-10-2018 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 SMART SM00382 203 348 3.8E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 SMART SM00382 484 649 3.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 SUPERFAMILY SSF81923 1 141 7.72E-53 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 515 533 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 731 0.0 T 13-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 208 339 5.8E-14 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 530 548 8.4E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 488 506 8.4E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 559 577 8.4E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 592 606 8.4E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 Pfam PF07724 AAA domain (Cdc48 subfamily) 483 645 4.8E-46 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atc_2674 dd6e27b101c67e060a8b8ab0b1c73566 750 Gene3D G3DSA:3.40.50.300 437 650 3.7E-76 T 13-10-2018 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 3.1E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 3.1E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 3.1E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 3.1E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 3.1E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 SUPERFAMILY SSF53067 10 153 2.02E-38 T 13-10-2018 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 340 7.1E-160 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 Gene3D G3DSA:3.30.420.40 14 332 3.2E-130 T 13-10-2018 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 Gene3D G3DSA:3.90.640.10 191 264 3.2E-130 T 13-10-2018 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 SUPERFAMILY SSF53067 155 335 2.18E-47 T 13-10-2018 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 Pfam PF06723 MreB/Mbl protein 12 340 2.4E-148 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Atc_2371 9db9f7171cbcf082d6de56a2d66647c4 347 Gene3D G3DSA:3.30.420.40 159 322 3.2E-130 T 13-10-2018 Atc_2084 8aba0006d66f9544ba69bc43146cbf58 107 SMART SM00530 51 106 5.8E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atc_2084 8aba0006d66f9544ba69bc43146cbf58 107 SUPERFAMILY SSF47413 50 98 1.79E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_2084 8aba0006d66f9544ba69bc43146cbf58 107 Gene3D G3DSA:1.10.260.40 1 103 1.8E-16 T 13-10-2018 Atc_2084 8aba0006d66f9544ba69bc43146cbf58 107 Pfam PF01381 Helix-turn-helix 52 91 3.2E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 SUPERFAMILY SSF82714 702 786 3.66E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 Gene3D G3DSA:3.30.70.1430 554 648 5.8E-290 T 13-10-2018 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.5E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.5E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.5E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.5E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.5E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.5E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 1.5E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.5E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 SUPERFAMILY SSF82693 40 126 6.54E-22 T 13-10-2018 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 SUPERFAMILY SSF82866 793 1007 6.15E-45 T 13-10-2018 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 SUPERFAMILY SSF82714 183 264 3.14E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 Gene3D G3DSA:3.30.2090.10 179 269 5.8E-290 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 Gene3D G3DSA:3.30.70.1430 40 797 5.8E-290 T 13-10-2018 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 SUPERFAMILY SSF82866 292 491 1.96E-43 T 13-10-2018 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 Gene3D G3DSA:1.20.1640.10 10 499 5.8E-290 T 13-10-2018 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 Gene3D G3DSA:3.30.2090.10 701 789 5.8E-290 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 Gene3D G3DSA:3.30.70.1320 133 326 5.8E-290 T 13-10-2018 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 Gene3D G3DSA:3.30.70.1440 649 846 5.8E-290 T 13-10-2018 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 SUPERFAMILY SSF82693 554 643 1.67E-6 T 13-10-2018 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 Pfam PF00873 AcrB/AcrD/AcrF family 6 1006 1.8E-287 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 Gene3D G3DSA:1.20.1640.10 500 1003 5.8E-290 T 13-10-2018 Atc_1637 167b28025c01c4c5928174f22c3b9202 1023 SUPERFAMILY SSF82693 136 322 2.79E-18 T 13-10-2018 Atc_3p24 84966523caacd131a916f88ae48c9400 111 Gene3D G3DSA:2.10.260.10 24 73 3.0E-6 T 13-10-2018 Atc_3p24 84966523caacd131a916f88ae48c9400 111 SUPERFAMILY SSF89447 26 73 8.11E-8 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Atc_3p24 84966523caacd131a916f88ae48c9400 111 SMART SM00966 31 77 8.5E-5 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atc_3p24 84966523caacd131a916f88ae48c9400 111 Pfam PF02381 MraZ protein, putative antitoxin-like 27 55 2.9E-5 T 13-10-2018 IPR020603 MraZ domain Atc_1145 a75be1088f216027e1af9794971ddf79 150 SUPERFAMILY SSF54611 9 135 2.83E-9 T 13-10-2018 IPR035958 SecB-like superfamily Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 429 2.3E-156 T 13-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 SMART SM00998 349 429 2.9E-41 T 13-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 6.1E-27 T 13-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 SUPERFAMILY SSF48557 3 429 1.48E-129 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 Pfam PF00206 Lyase 7 282 3.7E-52 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.5E-9 T 13-10-2018 Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.5E-9 T 13-10-2018 Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.5E-9 T 13-10-2018 Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 1.5E-9 T 13-10-2018 Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 Gene3D G3DSA:1.10.40.30 349 430 2.2E-30 T 13-10-2018 Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.3E-27 T 13-10-2018 IPR000362 Fumarate lyase family Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 2.3E-27 T 13-10-2018 IPR000362 Fumarate lyase family Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 2.3E-27 T 13-10-2018 IPR000362 Fumarate lyase family Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 2.3E-27 T 13-10-2018 IPR000362 Fumarate lyase family Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 Gene3D G3DSA:1.20.200.10 93 348 1.6E-91 T 13-10-2018 Atc_2200 d08e98648469c6f6cb8d01bb6476ac1b 435 Gene3D G3DSA:1.10.275.10 1 92 3.6E-34 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal Atc_0213 d84a54913ca6c69a0fc15805529a9a3b 331 Pfam PF01609 Transposase DDE domain 160 322 4.7E-14 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0213 d84a54913ca6c69a0fc15805529a9a3b 331 Pfam PF05598 Transposase domain (DUF772) 33 107 1.8E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0213 d84a54913ca6c69a0fc15805529a9a3b 331 SUPERFAMILY SSF53098 281 327 6.22E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_2253 6c0626fd4ef8ad3710986fe0b6c91731 702 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 12 100 1.1E-18 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Atc_2253 6c0626fd4ef8ad3710986fe0b6c91731 702 Gene3D G3DSA:2.60.40.10 1 143 3.4E-51 T 13-10-2018 IPR013783 Immunoglobulin-like fold Atc_2253 6c0626fd4ef8ad3710986fe0b6c91731 702 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 8 698 0.0 T 13-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 Atc_2253 6c0626fd4ef8ad3710986fe0b6c91731 702 SUPERFAMILY SSF51011 592 698 3.24E-26 T 13-10-2018 Atc_2253 6c0626fd4ef8ad3710986fe0b6c91731 702 Gene3D G3DSA:2.60.40.1180 591 699 1.8E-18 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta Atc_2253 6c0626fd4ef8ad3710986fe0b6c91731 702 SUPERFAMILY SSF81296 8 154 8.12E-49 T 13-10-2018 IPR014756 Immunoglobulin E-set Atc_2253 6c0626fd4ef8ad3710986fe0b6c91731 702 Pfam PF00128 Alpha amylase, catalytic domain 193 280 1.4E-11 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atc_2253 6c0626fd4ef8ad3710986fe0b6c91731 702 Gene3D G3DSA:3.20.20.80 144 585 1.0E-168 T 13-10-2018 Atc_2253 6c0626fd4ef8ad3710986fe0b6c91731 702 SUPERFAMILY SSF51445 142 580 2.15E-124 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Atc_2253 6c0626fd4ef8ad3710986fe0b6c91731 702 SMART SM00642 165 571 6.3E-9 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atc_m126 3469556a3a6bedc71f8d28ef8136937d 577 Pfam PF01368 DHH family 76 204 1.6E-6 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atc_m126 3469556a3a6bedc71f8d28ef8136937d 577 Gene3D G3DSA:3.10.310.30 327 457 5.2E-29 T 13-10-2018 Atc_m126 3469556a3a6bedc71f8d28ef8136937d 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 22 570 1.8E-142 T 13-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Atc_m126 3469556a3a6bedc71f8d28ef8136937d 577 Gene3D G3DSA:3.90.1640.30 46 324 2.4E-82 T 13-10-2018 Atc_m126 3469556a3a6bedc71f8d28ef8136937d 577 SUPERFAMILY SSF64182 47 465 1.83E-103 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily Atc_m126 3469556a3a6bedc71f8d28ef8136937d 577 Pfam PF02272 DHHA1 domain 320 451 1.5E-20 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Atc_1094 1188c1ce8b0358aa54fdff82d46ddd4d 200 Gene3D G3DSA:3.40.50.360 1 200 8.0E-76 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Atc_1094 1188c1ce8b0358aa54fdff82d46ddd4d 200 Pfam PF03358 NADPH-dependent FMN reductase 3 143 2.7E-16 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Atc_1094 1188c1ce8b0358aa54fdff82d46ddd4d 200 SUPERFAMILY SSF52218 2 198 2.23E-62 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Atc_1094 1188c1ce8b0358aa54fdff82d46ddd4d 200 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 198 6.5E-89 T 13-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Atc_1094 1188c1ce8b0358aa54fdff82d46ddd4d 200 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 200 46.609 T 13-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Atc_2212 a24cd356369bd309499b1fd5fe2cb1c4 41 SUPERFAMILY SSF46626 2 41 1.29E-5 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_2212 a24cd356369bd309499b1fd5fe2cb1c4 41 Gene3D G3DSA:1.10.760.10 1 41 6.7E-9 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 Gene3D G3DSA:1.10.8.60 310 385 1.2E-21 T 13-10-2018 Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 SUPERFAMILY SSF52540 146 381 4.85E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 Gene3D G3DSA:3.40.50.300 137 309 4.8E-45 T 13-10-2018 Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 SUPERFAMILY SSF46689 351 452 1.03E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 SUPERFAMILY SSF52172 4 188 4.41E-43 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 SMART SM00382 163 301 3.0E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 Pfam PF02954 Bacterial regulatory protein, Fis family 410 448 5.9E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 Gene3D G3DSA:3.40.50.2300 4 136 1.2E-38 T 13-10-2018 Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 Gene3D G3DSA:1.10.10.60 403 456 1.2E-16 T 13-10-2018 Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 Pfam PF00072 Response regulator receiver domain 8 113 7.7E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 Pfam PF00158 Sigma-54 interaction domain 145 304 1.3E-41 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 SMART SM00448 6 117 3.7E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0018 4721c71acb33af58f0e6b305951cfd07 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_1528 f3979885f6d19ffb988a5531b37709c2 655 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 31 652 3.6E-295 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Atc_1528 f3979885f6d19ffb988a5531b37709c2 655 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 35 88 2.8E-17 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Atc_1528 f3979885f6d19ffb988a5531b37709c2 655 ProSitePatterns PS00455 Putative AMP-binding domain signature. 268 279 - T 13-10-2018 IPR020845 AMP-binding, conserved site Atc_1528 f3979885f6d19ffb988a5531b37709c2 655 SUPERFAMILY SSF56801 27 633 6.8E-181 T 13-10-2018 Atc_1528 f3979885f6d19ffb988a5531b37709c2 655 Gene3D G3DSA:3.40.50.12780 63 524 1.4E-112 T 13-10-2018 Atc_1528 f3979885f6d19ffb988a5531b37709c2 655 Pfam PF00501 AMP-binding enzyme 97 531 2.7E-99 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atc_1528 f3979885f6d19ffb988a5531b37709c2 655 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 11 655 51.489 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Atc_1528 f3979885f6d19ffb988a5531b37709c2 655 Pfam PF13193 AMP-binding enzyme C-terminal domain 540 620 2.0E-28 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Atc_1528 f3979885f6d19ffb988a5531b37709c2 655 Gene3D G3DSA:3.30.300.30 527 653 7.1E-30 T 13-10-2018 Atc_0182 31a1bf427672f20a1a6afee501d5a15b 46 Pfam PF11127 Protein of unknown function (DUF2892) 1 43 4.2E-13 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 Atc_0359 ee14c59896630e9655d4ac80c3418418 79 Gene3D G3DSA:3.30.300.90 1 75 1.6E-27 T 13-10-2018 Atc_0359 ee14c59896630e9655d4ac80c3418418 79 SUPERFAMILY SSF82657 1 77 3.4E-23 T 13-10-2018 IPR036065 BolA-like superfamily Atc_0359 ee14c59896630e9655d4ac80c3418418 79 Pfam PF01722 BolA-like protein 25 74 8.9E-17 T 13-10-2018 IPR002634 BolA protein Atc_0359 ee14c59896630e9655d4ac80c3418418 79 PIRSF PIRSF003113 1 79 1.5E-19 T 13-10-2018 IPR002634 BolA protein Atc_0865 8c361ead7e63f2f7088cdd085694120a 91 Pfam PF14373 Superinfection immunity protein 26 66 2.1E-12 T 13-10-2018 IPR016410 Bacteriophage-associated immunity protein Atc_1518 50c31eee700084f2e50515841c94c972 328 Gene3D G3DSA:3.40.50.80 191 327 4.8E-29 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atc_1518 50c31eee700084f2e50515841c94c972 328 Pfam PF00970 Oxidoreductase FAD-binding domain 101 191 5.8E-10 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Atc_1518 50c31eee700084f2e50515841c94c972 328 SUPERFAMILY SSF52343 195 325 1.1E-31 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atc_1518 50c31eee700084f2e50515841c94c972 328 Gene3D G3DSA:3.10.20.30 1 91 1.5E-16 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Atc_1518 50c31eee700084f2e50515841c94c972 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 291 299 8.5E-15 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_1518 50c31eee700084f2e50515841c94c972 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 137 8.5E-15 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_1518 50c31eee700084f2e50515841c94c972 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 227 236 8.5E-15 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_1518 50c31eee700084f2e50515841c94c972 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 202 221 8.5E-15 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_1518 50c31eee700084f2e50515841c94c972 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 143 150 2.3E-9 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_1518 50c31eee700084f2e50515841c94c972 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 202 221 2.3E-9 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_1518 50c31eee700084f2e50515841c94c972 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 291 299 2.3E-9 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_1518 50c31eee700084f2e50515841c94c972 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 227 236 2.3E-9 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_1518 50c31eee700084f2e50515841c94c972 328 SUPERFAMILY SSF63380 98 192 6.47E-25 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atc_1518 50c31eee700084f2e50515841c94c972 328 SUPERFAMILY SSF54292 2 88 1.97E-17 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atc_1518 50c31eee700084f2e50515841c94c972 328 Pfam PF00175 Oxidoreductase NAD-binding domain 203 304 6.8E-11 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Atc_1518 50c31eee700084f2e50515841c94c972 328 Gene3D G3DSA:2.40.30.10 92 189 1.2E-25 T 13-10-2018 Atc_1518 50c31eee700084f2e50515841c94c972 328 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 77 1.5E-8 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Atc_2646 5fb3a0dd3f20229ba2f464b5c5c7e395 322 Gene3D G3DSA:3.30.1700.10 145 321 6.1E-71 T 13-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Atc_2646 5fb3a0dd3f20229ba2f464b5c5c7e395 322 SUPERFAMILY SSF54211 20 141 7.51E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_2646 5fb3a0dd3f20229ba2f464b5c5c7e395 322 SUPERFAMILY SSF54211 150 293 6.52E-53 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_2646 5fb3a0dd3f20229ba2f464b5c5c7e395 322 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 19 296 46.995 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Atc_2646 5fb3a0dd3f20229ba2f464b5c5c7e395 322 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 21 292 4.2E-109 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Atc_2646 5fb3a0dd3f20229ba2f464b5c5c7e395 322 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 19 314 3.1E-118 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Atc_2646 5fb3a0dd3f20229ba2f464b5c5c7e395 322 Gene3D G3DSA:3.30.230.20 18 144 5.0E-48 T 13-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Gene3D G3DSA:2.120.10.90 522 831 6.5E-124 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 684 730 1.5E-15 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 530 575 2.2E-8 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 784 830 7.3E-11 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 780 2.8E-13 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 635 676 6.7E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 581 628 1.2E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Gene3D G3DSA:1.10.268.10 370 484 1.5E-217 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 830 0.0 T 13-10-2018 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 SMART SM00434 11 490 6.1E-273 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 495 1.7E-151 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Gene3D G3DSA:3.90.199.10 33 512 1.5E-217 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 SUPERFAMILY SSF101904 524 837 9.81E-107 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Gene3D G3DSA:3.30.1360.40 236 333 1.5E-217 T 13-10-2018 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 7 832 23.979 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atc_1386 1f44d9d3633dac1dee903a62f0b69084 847 SUPERFAMILY SSF56719 30 513 1.7E-175 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 Gene3D G3DSA:3.30.2090.10 181 273 1.4E-256 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 8.9E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 8.9E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 8.9E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 8.9E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 8.9E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 SUPERFAMILY SSF82866 291 498 1.44E-34 T 13-10-2018 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 Gene3D G3DSA:3.30.70.1440 665 864 1.4E-256 T 13-10-2018 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 Gene3D G3DSA:3.30.70.1320 136 328 1.4E-256 T 13-10-2018 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 Pfam PF00873 AcrB/AcrD/AcrF family 6 1018 7.5E-237 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 Gene3D G3DSA:3.30.70.1430 564 664 1.4E-256 T 13-10-2018 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 Gene3D G3DSA:1.20.1640.10 505 1018 1.4E-256 T 13-10-2018 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 SUPERFAMILY SSF82693 42 132 8.11E-22 T 13-10-2018 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 Gene3D G3DSA:3.30.70.1430 42 812 1.4E-256 T 13-10-2018 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 Gene3D G3DSA:3.30.2090.10 716 804 1.4E-256 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 SUPERFAMILY SSF82714 714 799 1.83E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 Gene3D G3DSA:1.20.1640.10 16 504 1.4E-256 T 13-10-2018 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 SUPERFAMILY SSF82866 798 1024 1.09E-37 T 13-10-2018 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 SUPERFAMILY SSF82693 140 312 8.89E-16 T 13-10-2018 Atc_m063 1eacbd94e8a1ba71508b861042fe9c5a 1035 SUPERFAMILY SSF82714 184 264 1.24E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1792 a906ad43e84945a4fc10cb94b009df12 189 Gene3D G3DSA:3.90.950.10 2 188 7.6E-55 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atc_1792 a906ad43e84945a4fc10cb94b009df12 189 Pfam PF02545 Maf-like protein 3 183 1.9E-41 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Atc_1792 a906ad43e84945a4fc10cb94b009df12 189 SUPERFAMILY SSF52972 2 183 1.37E-52 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atc_1792 a906ad43e84945a4fc10cb94b009df12 189 PIRSF PIRSF006305 1 188 8.7E-42 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Atc_1792 a906ad43e84945a4fc10cb94b009df12 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 182 5.9E-47 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Atc_1792 a906ad43e84945a4fc10cb94b009df12 189 Hamap MF_00528 Septum formation protein Maf [maf]. 2 188 28.12 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Atc_1038 9d87ebde22cdab7a517abe9d0b2334d8 218 Gene3D G3DSA:3.40.190.10 5 195 3.2E-38 T 13-10-2018 Atc_1038 9d87ebde22cdab7a517abe9d0b2334d8 218 SUPERFAMILY SSF53850 4 199 8.95E-35 T 13-10-2018 Atc_1038 9d87ebde22cdab7a517abe9d0b2334d8 218 Pfam PF03466 LysR substrate binding domain 3 196 8.0E-41 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_1038 9d87ebde22cdab7a517abe9d0b2334d8 218 Gene3D G3DSA:3.40.190.10 70 172 3.2E-38 T 13-10-2018 Atc_0466 fe6d1bd5edd3f54cc2b9815855f46811 365 Pfam PF00472 RF-1 domain 219 326 1.8E-41 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Atc_0466 fe6d1bd5edd3f54cc2b9815855f46811 365 SUPERFAMILY SSF75620 14 358 2.75E-132 T 13-10-2018 Atc_0466 fe6d1bd5edd3f54cc2b9815855f46811 365 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 6 360 1.7E-157 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Atc_0466 fe6d1bd5edd3f54cc2b9815855f46811 365 Gene3D G3DSA:3.30.70.1660 116 347 3.9E-95 T 13-10-2018 Atc_0466 fe6d1bd5edd3f54cc2b9815855f46811 365 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 233 249 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Atc_0466 fe6d1bd5edd3f54cc2b9815855f46811 365 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 7 362 39.911 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Atc_0466 fe6d1bd5edd3f54cc2b9815855f46811 365 SMART SM00937 69 183 5.9E-60 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Atc_0466 fe6d1bd5edd3f54cc2b9815855f46811 365 Gene3D G3DSA:3.30.160.20 215 302 3.9E-95 T 13-10-2018 Atc_0466 fe6d1bd5edd3f54cc2b9815855f46811 365 Pfam PF03462 PCRF domain 15 208 1.9E-69 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Atc_0570 cf4666c6310659817cb97cc949c3aa91 241 Gene3D G3DSA:1.10.1270.20 173 241 1.4E-25 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Atc_0570 cf4666c6310659817cb97cc949c3aa91 241 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 226 1.0E-81 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Atc_0570 cf4666c6310659817cb97cc949c3aa91 241 PIRSF PIRSF000386 1 241 6.7E-88 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Atc_0570 cf4666c6310659817cb97cc949c3aa91 241 SUPERFAMILY SSF75217 1 238 1.57E-88 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Atc_0570 cf4666c6310659817cb97cc949c3aa91 241 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 28 220 1.8E-51 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Atc_0570 cf4666c6310659817cb97cc949c3aa91 241 Gene3D G3DSA:3.40.1280.10 1 172 1.3E-62 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atc_0570 cf4666c6310659817cb97cc949c3aa91 241 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 241 99.591 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Atc_0236 ae57ebf4ab9d0e9c6f0ca47068d0826a 295 SUPERFAMILY SSF103515 63 295 3.53E-5 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Atc_1890 deb47e3fed734fd154761606332e2954 752 Pfam PF00403 Heavy-metal-associated domain 12 71 8.8E-15 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atc_1890 deb47e3fed734fd154761606332e2954 752 Gene3D G3DSA:2.70.150.20 230 342 9.8E-40 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 151 742 2.7E-176 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 Pfam PF00702 haloacid dehalogenase-like hydrolase 433 647 4.8E-47 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00943 Copper-transporting ATPase signature 24 38 6.3E-19 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00943 Copper-transporting ATPase signature 206 225 6.3E-19 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00943 Copper-transporting ATPase signature 360 374 6.3E-19 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00943 Copper-transporting ATPase signature 610 627 6.3E-19 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00943 Copper-transporting ATPase signature 706 720 6.3E-19 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00943 Copper-transporting ATPase signature 154 173 6.3E-19 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00943 Copper-transporting ATPase signature 226 244 6.3E-19 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00943 Copper-transporting ATPase signature 420 435 6.3E-19 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 Gene3D G3DSA:3.30.70.100 7 87 7.9E-23 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00942 Copper-transporting ATPase 1 signature 35 58 4.0E-7 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00942 Copper-transporting ATPase 1 signature 9 34 4.0E-7 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 439 445 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 580 590 1.7E-28 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 652 1.7E-28 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 287 301 1.7E-28 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 437 451 1.7E-28 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 668 1.7E-28 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 558 569 1.7E-28 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 169 741 1.5E-186 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Atc_1890 deb47e3fed734fd154761606332e2954 752 Gene3D G3DSA:3.40.1110.10 448 565 6.0E-95 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atc_1890 deb47e3fed734fd154761606332e2954 752 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 209 712 4.6E-96 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_1890 deb47e3fed734fd154761606332e2954 752 SUPERFAMILY SSF56784 435 739 6.48E-57 T 13-10-2018 IPR036412 HAD-like superfamily Atc_1890 deb47e3fed734fd154761606332e2954 752 Gene3D G3DSA:3.40.50.1000 418 685 6.0E-95 T 13-10-2018 IPR023214 HAD superfamily Atc_1890 deb47e3fed734fd154761606332e2954 752 SUPERFAMILY SSF81665 188 707 9.68E-15 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Atc_1890 deb47e3fed734fd154761606332e2954 752 SUPERFAMILY SSF81653 245 337 8.37E-25 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Atc_1890 deb47e3fed734fd154761606332e2954 752 SUPERFAMILY SSF55008 5 77 6.81E-21 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atc_1890 deb47e3fed734fd154761606332e2954 752 Pfam PF00122 E1-E2 ATPase 237 416 6.8E-52 T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 ProSitePatterns PS01229 Hypothetical cof family signature 2. 633 655 - T 13-10-2018 Atc_1890 deb47e3fed734fd154761606332e2954 752 ProSitePatterns PS01047 Heavy-metal-associated domain. 14 43 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atc_0524 af011f70413dd0260599d9ebbd8b8367 436 Pfam PF00483 Nucleotidyl transferase 25 294 5.1E-63 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Atc_0524 af011f70413dd0260599d9ebbd8b8367 436 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 213 223 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Atc_0524 af011f70413dd0260599d9ebbd8b8367 436 SUPERFAMILY SSF51161 315 416 3.33E-15 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Atc_0524 af011f70413dd0260599d9ebbd8b8367 436 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 24 403 4.5E-151 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Atc_0524 af011f70413dd0260599d9ebbd8b8367 436 Gene3D G3DSA:3.90.550.10 14 305 2.6E-85 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0524 af011f70413dd0260599d9ebbd8b8367 436 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 29 48 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Atc_0524 af011f70413dd0260599d9ebbd8b8367 436 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 20 429 50.459 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Atc_0524 af011f70413dd0260599d9ebbd8b8367 436 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 115 123 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Atc_0524 af011f70413dd0260599d9ebbd8b8367 436 SUPERFAMILY SSF53448 21 383 2.35E-75 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0524 af011f70413dd0260599d9ebbd8b8367 436 Gene3D G3DSA:2.160.10.10 306 433 6.3E-34 T 13-10-2018 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 SUPERFAMILY SSF51735 1 155 5.78E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 Gene3D G3DSA:3.30.360.10 155 318 1.4E-143 T 13-10-2018 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 6.0E-39 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 6.0E-39 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 6.0E-39 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 6.0E-39 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 273 288 6.0E-39 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 Gene3D G3DSA:3.40.50.720 4 328 1.4E-143 T 13-10-2018 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 SUPERFAMILY SSF55347 156 317 1.75E-66 T 13-10-2018 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 316 6.6E-60 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 PIRSF PIRSF000149 1 338 1.2E-133 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 2.4E-128 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 105 1.2E-37 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0072 6daeaf6acd160f1b9f43f0efc229f633 338 SMART SM00846 3 156 6.6E-97 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_1762 5137a5c63c9ed914ceedfc0bec368346 249 Pfam PF01066 CDP-alcohol phosphatidyltransferase 13 76 4.0E-14 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Atc_1762 5137a5c63c9ed914ceedfc0bec368346 249 Gene3D G3DSA:1.20.120.1760 8 185 2.6E-16 T 13-10-2018 Atc_1762 5137a5c63c9ed914ceedfc0bec368346 249 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Atc_1762 5137a5c63c9ed914ceedfc0bec368346 249 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 19 182 3.8E-40 T 13-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 Atc_2841 8ca697e8321705e799a8ce2fbdae4b38 335 Gene3D G3DSA:3.40.718.10 2 329 2.0E-123 T 13-10-2018 Atc_2841 8ca697e8321705e799a8ce2fbdae4b38 335 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 320 6.5E-107 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Atc_2841 8ca697e8321705e799a8ce2fbdae4b38 335 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 327 35.835 T 13-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 Atc_2841 8ca697e8321705e799a8ce2fbdae4b38 335 SUPERFAMILY SSF53659 3 327 3.36E-112 T 13-10-2018 Atc_2841 8ca697e8321705e799a8ce2fbdae4b38 335 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 323 1.5E-126 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 28 402 2.5E-107 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 SUPERFAMILY SSF55174 327 402 9.42E-12 T 13-10-2018 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 Pfam PF00579 tRNA synthetases class I (W and Y) 36 319 6.4E-77 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 6.9E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 6.9E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 6.9E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 51 73 6.9E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 57 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 Gene3D G3DSA:3.40.50.620 15 222 2.1E-69 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 SUPERFAMILY SSF52374 28 322 3.58E-88 T 13-10-2018 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 Gene3D G3DSA:1.10.240.10 223 333 1.2E-28 T 13-10-2018 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 3 403 45.187 T 13-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 Atc_2783 96cb4ac96fcdaf8647f69fb22189381c 411 Gene3D G3DSA:3.10.290.10 334 403 5.2E-9 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atc_2570 e8a961c9f5d7517e3db935c9802e8c56 565 SUPERFAMILY SSF56762 191 565 1.15E-111 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2570 e8a961c9f5d7517e3db935c9802e8c56 565 SUPERFAMILY SSF143243 21 195 1.18E-45 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2570 e8a961c9f5d7517e3db935c9802e8c56 565 Gene3D G3DSA:1.10.645.20 182 565 1.1E-139 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2570 e8a961c9f5d7517e3db935c9802e8c56 565 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 295 565 2.3E-89 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2570 e8a961c9f5d7517e3db935c9802e8c56 565 Gene3D G3DSA:3.30.460.80 3 127 1.8E-28 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2570 e8a961c9f5d7517e3db935c9802e8c56 565 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 81 136 3.0E-13 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2570 e8a961c9f5d7517e3db935c9802e8c56 565 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 176 565 41.641 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2570 e8a961c9f5d7517e3db935c9802e8c56 565 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 108 129 - T 13-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2570 e8a961c9f5d7517e3db935c9802e8c56 565 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 28 146 1.6E-35 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1404 44bfc355629329a2592b163df52dbc89 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.3E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_1404 44bfc355629329a2592b163df52dbc89 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.3E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_1404 44bfc355629329a2592b163df52dbc89 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.3E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_1404 44bfc355629329a2592b163df52dbc89 90 Gene3D G3DSA:4.10.520.10 1 90 1.5E-35 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_1404 44bfc355629329a2592b163df52dbc89 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Atc_1404 44bfc355629329a2592b163df52dbc89 90 SMART SM00411 1 90 2.7E-43 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_1404 44bfc355629329a2592b163df52dbc89 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 8.1E-33 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_1404 44bfc355629329a2592b163df52dbc89 90 SUPERFAMILY SSF47729 1 90 8.54E-33 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_0814 ddf250e3ea9f96c382302f8e6d03ea76 426 Pfam PF00390 Malic enzyme, N-terminal domain 40 170 6.4E-25 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Atc_0814 ddf250e3ea9f96c382302f8e6d03ea76 426 SMART SM01274 38 171 1.0E-72 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Atc_0814 ddf250e3ea9f96c382302f8e6d03ea76 426 Pfam PF03949 Malic enzyme, NAD binding domain 185 373 9.0E-18 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Atc_0814 ddf250e3ea9f96c382302f8e6d03ea76 426 SMART SM00919 183 419 1.5E-102 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Atc_0814 ddf250e3ea9f96c382302f8e6d03ea76 426 SUPERFAMILY SSF51735 183 425 8.25E-67 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0814 ddf250e3ea9f96c382302f8e6d03ea76 426 SUPERFAMILY SSF53223 30 181 2.95E-52 T 13-10-2018 Atc_0814 ddf250e3ea9f96c382302f8e6d03ea76 426 Gene3D G3DSA:3.40.50.10380 16 180 7.6E-68 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Atc_0814 ddf250e3ea9f96c382302f8e6d03ea76 426 Gene3D G3DSA:3.40.50.720 181 426 2.6E-66 T 13-10-2018 Atc_1508 54d0e710cea6f9bbc0fc67ae728e5cb6 275 Gene3D G3DSA:3.40.50.620 1 176 1.7E-66 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_1508 54d0e710cea6f9bbc0fc67ae728e5cb6 275 Hamap MF_00158 Pantothenate synthetase [panC]. 2 275 35.756 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Atc_1508 54d0e710cea6f9bbc0fc67ae728e5cb6 275 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 273 1.5E-79 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Atc_1508 54d0e710cea6f9bbc0fc67ae728e5cb6 275 SUPERFAMILY SSF52374 1 275 7.74E-91 T 13-10-2018 Atc_1508 54d0e710cea6f9bbc0fc67ae728e5cb6 275 Pfam PF02569 Pantoate-beta-alanine ligase 3 273 1.7E-90 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Atc_1508 54d0e710cea6f9bbc0fc67ae728e5cb6 275 Gene3D G3DSA:3.30.1300.10 177 275 1.3E-23 T 13-10-2018 Atc_1929 ade064ca71fcdcb4067fba85cb14702d 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 2 64 3.8E-12 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atc_1929 ade064ca71fcdcb4067fba85cb14702d 201 Gene3D G3DSA:3.40.30.10 1 185 2.2E-52 T 13-10-2018 Atc_1929 ade064ca71fcdcb4067fba85cb14702d 201 SUPERFAMILY SSF47616 62 191 2.23E-17 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atc_1929 ade064ca71fcdcb4067fba85cb14702d 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 184 2.5E-5 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal Atc_1929 ade064ca71fcdcb4067fba85cb14702d 201 Gene3D G3DSA:1.20.1050.10 66 183 2.2E-52 T 13-10-2018 Atc_1929 ade064ca71fcdcb4067fba85cb14702d 201 SUPERFAMILY SSF52833 1 74 3.1E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2154 32f79da597ee7f248c90dcc53ff9e537 364 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 3.8E-140 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atc_2154 32f79da597ee7f248c90dcc53ff9e537 364 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atc_2154 32f79da597ee7f248c90dcc53ff9e537 364 SUPERFAMILY SSF103263 4 352 5.76E-145 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atc_2154 32f79da597ee7f248c90dcc53ff9e537 364 Gene3D G3DSA:3.60.150.10 1 362 2.0E-154 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atc_2154 32f79da597ee7f248c90dcc53ff9e537 364 PIRSF PIRSF001456 3 358 2.4E-139 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atc_2154 32f79da597ee7f248c90dcc53ff9e537 364 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atc_2154 32f79da597ee7f248c90dcc53ff9e537 364 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atc_2154 32f79da597ee7f248c90dcc53ff9e537 364 Pfam PF01264 Chorismate synthase 10 345 1.8E-141 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atc_2154 32f79da597ee7f248c90dcc53ff9e537 364 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.598 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atc_2572 19879bba269f5fca1f11b0c2c65dfa8e 417 Gene3D G3DSA:3.10.20.600 223 316 3.6E-28 T 13-10-2018 Atc_2572 19879bba269f5fca1f11b0c2c65dfa8e 417 SUPERFAMILY SSF142019 4 230 1.96E-65 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2572 19879bba269f5fca1f11b0c2c65dfa8e 417 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 333 344 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2572 19879bba269f5fca1f11b0c2c65dfa8e 417 Gene3D G3DSA:1.20.1440.230 319 415 1.1E-25 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2572 19879bba269f5fca1f11b0c2c65dfa8e 417 SMART SM00928 320 365 5.3E-18 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2572 19879bba269f5fca1f11b0c2c65dfa8e 417 Gene3D G3DSA:3.40.50.11540 48 222 1.0E-61 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2572 19879bba269f5fca1f11b0c2c65dfa8e 417 Pfam PF10531 SLBB domain 235 283 3.3E-12 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2572 19879bba269f5fca1f11b0c2c65dfa8e 417 SUPERFAMILY SSF140490 317 414 5.36E-30 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2572 19879bba269f5fca1f11b0c2c65dfa8e 417 SUPERFAMILY SSF142984 232 315 2.09E-23 T 13-10-2018 Atc_2572 19879bba269f5fca1f11b0c2c65dfa8e 417 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 324 405 9.9E-25 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2572 19879bba269f5fca1f11b0c2c65dfa8e 417 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 43 210 8.3E-43 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_m200 df4c436be7aea90880ac7322b679dd62 251 Pfam PF08483 IstB-like ATP binding N-terminal 24 52 1.8E-10 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal Atc_m200 df4c436be7aea90880ac7322b679dd62 251 SMART SM00382 98 231 2.0E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_m200 df4c436be7aea90880ac7322b679dd62 251 Pfam PF01695 IstB-like ATP binding protein 56 230 8.1E-66 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_m200 df4c436be7aea90880ac7322b679dd62 251 Gene3D G3DSA:3.40.50.300 62 248 5.1E-47 T 13-10-2018 Atc_m200 df4c436be7aea90880ac7322b679dd62 251 PIRSF PIRSF003073 1 251 1.5E-71 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_m200 df4c436be7aea90880ac7322b679dd62 251 SUPERFAMILY SSF52540 65 240 3.47E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m104 df4c436be7aea90880ac7322b679dd62 251 Pfam PF08483 IstB-like ATP binding N-terminal 24 52 1.8E-10 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal Atc_m104 df4c436be7aea90880ac7322b679dd62 251 SMART SM00382 98 231 2.0E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_m104 df4c436be7aea90880ac7322b679dd62 251 Pfam PF01695 IstB-like ATP binding protein 56 230 8.1E-66 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_m104 df4c436be7aea90880ac7322b679dd62 251 Gene3D G3DSA:3.40.50.300 62 248 5.1E-47 T 13-10-2018 Atc_m104 df4c436be7aea90880ac7322b679dd62 251 PIRSF PIRSF003073 1 251 1.5E-71 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_m104 df4c436be7aea90880ac7322b679dd62 251 SUPERFAMILY SSF52540 65 240 3.47E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m013 df4c436be7aea90880ac7322b679dd62 251 Pfam PF08483 IstB-like ATP binding N-terminal 24 52 1.8E-10 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal Atc_m013 df4c436be7aea90880ac7322b679dd62 251 SMART SM00382 98 231 2.0E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_m013 df4c436be7aea90880ac7322b679dd62 251 Pfam PF01695 IstB-like ATP binding protein 56 230 8.1E-66 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_m013 df4c436be7aea90880ac7322b679dd62 251 Gene3D G3DSA:3.40.50.300 62 248 5.1E-47 T 13-10-2018 Atc_m013 df4c436be7aea90880ac7322b679dd62 251 PIRSF PIRSF003073 1 251 1.5E-71 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_m013 df4c436be7aea90880ac7322b679dd62 251 SUPERFAMILY SSF52540 65 240 3.47E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0809 d2a4a2467405c517eddc36788edc5672 88 Pfam PF07769 psiF repeat 55 85 1.5E-15 T 13-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat Atc_0485 ab2f7434733fac65e12ca051eb340460 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 191 3.3E-4 T 13-10-2018 Atc_0485 ab2f7434733fac65e12ca051eb340460 244 SUPERFAMILY SSF51735 3 229 9.24E-73 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0485 ab2f7434733fac65e12ca051eb340460 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atc_0485 ab2f7434733fac65e12ca051eb340460 244 Pfam PF00106 short chain dehydrogenase 9 191 1.9E-57 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0485 ab2f7434733fac65e12ca051eb340460 244 Gene3D G3DSA:3.40.50.720 1 240 2.5E-73 T 13-10-2018 Atc_0485 ab2f7434733fac65e12ca051eb340460 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.0E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0485 ab2f7434733fac65e12ca051eb340460 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.0E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0485 ab2f7434733fac65e12ca051eb340460 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.0E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0485 ab2f7434733fac65e12ca051eb340460 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.9E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0485 ab2f7434733fac65e12ca051eb340460 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.9E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0485 ab2f7434733fac65e12ca051eb340460 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.9E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0485 ab2f7434733fac65e12ca051eb340460 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.9E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0485 ab2f7434733fac65e12ca051eb340460 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.9E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1543 36da8d3eb73cb399b7d0780e6b9accb0 397 Pfam PF01566 Natural resistance-associated macrophage protein 19 357 6.2E-68 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atc_1740 d3965256a9cbc65b9e883e30391736b3 590 Pfam PF00005 ABC transporter 387 520 1.8E-16 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_1740 d3965256a9cbc65b9e883e30391736b3 590 SUPERFAMILY SSF90123 24 342 9.42E-22 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atc_1740 d3965256a9cbc65b9e883e30391736b3 590 SUPERFAMILY SSF52540 363 565 7.68E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1740 d3965256a9cbc65b9e883e30391736b3 590 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_1740 d3965256a9cbc65b9e883e30391736b3 590 SMART SM00382 395 568 2.8E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1740 d3965256a9cbc65b9e883e30391736b3 590 Gene3D G3DSA:3.40.50.300 339 575 2.2E-40 T 13-10-2018 Atc_1740 d3965256a9cbc65b9e883e30391736b3 590 Pfam PF06472 ABC transporter transmembrane region 2 3 298 6.5E-67 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atc_1699 5f0e41c8c7f65543adefcc7d1ba6ca22 1154 PIRSF PIRSF005719 561 1152 7.7E-109 T 13-10-2018 IPR024704 Structural maintenance of chromosomes protein Atc_1699 5f0e41c8c7f65543adefcc7d1ba6ca22 1154 PIRSF PIRSF005719 1 533 3.2E-113 T 13-10-2018 IPR024704 Structural maintenance of chromosomes protein Atc_1699 5f0e41c8c7f65543adefcc7d1ba6ca22 1154 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1145 20.362 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Atc_1699 5f0e41c8c7f65543adefcc7d1ba6ca22 1154 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1142 3.2E-267 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Atc_1699 5f0e41c8c7f65543adefcc7d1ba6ca22 1154 Gene3D G3DSA:3.40.50.300 992 1153 7.5E-43 T 13-10-2018 Atc_1699 5f0e41c8c7f65543adefcc7d1ba6ca22 1154 Gene3D G3DSA:3.40.50.300 1 218 2.1E-49 T 13-10-2018 Atc_1699 5f0e41c8c7f65543adefcc7d1ba6ca22 1154 SUPERFAMILY SSF52540 1 1150 4.96E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1699 5f0e41c8c7f65543adefcc7d1ba6ca22 1154 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1135 2.7E-65 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Atc_1728 58a80ae138883e441d50546cc7c74b28 715 Pfam PF00534 Glycosyl transferases group 1 253 420 1.4E-21 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Atc_1728 58a80ae138883e441d50546cc7c74b28 715 SUPERFAMILY SSF53756 28 450 2.9E-65 T 13-10-2018 Atc_1728 58a80ae138883e441d50546cc7c74b28 715 Gene3D G3DSA:3.40.50.2000 28 438 2.1E-135 T 13-10-2018 Atc_1728 58a80ae138883e441d50546cc7c74b28 715 Gene3D G3DSA:3.40.50.1000 475 706 1.2E-72 T 13-10-2018 IPR023214 HAD superfamily Atc_1728 58a80ae138883e441d50546cc7c74b28 715 SUPERFAMILY SSF56784 475 680 3.96E-25 T 13-10-2018 IPR036412 HAD-like superfamily Atc_1728 58a80ae138883e441d50546cc7c74b28 715 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 475 667 2.1E-18 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Atc_1728 58a80ae138883e441d50546cc7c74b28 715 Pfam PF13439 Glycosyltransferase Family 4 31 228 5.3E-13 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atc_1728 58a80ae138883e441d50546cc7c74b28 715 Gene3D G3DSA:3.40.50.2000 224 432 2.1E-135 T 13-10-2018 Atc_1728 58a80ae138883e441d50546cc7c74b28 715 TIGRFAM TIGR02472 sucr_P_syn_N: sucrose-phosphate synthase, putative, glycosyltransferase domain 8 444 2.3E-176 T 13-10-2018 IPR012822 Sucrose-phosphate synthase, glycosyltransferase domain Atc_1728 58a80ae138883e441d50546cc7c74b28 715 TIGRFAM TIGR02471 sucr_syn_bact_C: sucrose-phosphate synthase, sucrose phosphatase-like domain 476 709 3.0E-80 T 13-10-2018 IPR012821 Sucrose phosphate synthase, sucrose phosphatase-like domain Atc_1728 58a80ae138883e441d50546cc7c74b28 715 Gene3D G3DSA:3.90.1070.10 560 629 1.2E-72 T 13-10-2018 Atc_1728 58a80ae138883e441d50546cc7c74b28 715 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 474 709 1.2E-72 T 13-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 SUPERFAMILY SSF50156 430 499 3.33E-11 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 Gene3D G3DSA:2.30.42.10 407 501 6.7E-12 T 13-10-2018 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 Gene3D G3DSA:2.30.42.10 293 394 3.9E-27 T 13-10-2018 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 Pfam PF13180 PDZ domain 293 384 1.9E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 PRINTS PR00834 HtrA/DegQ protease family signature 225 242 3.3E-39 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 PRINTS PR00834 HtrA/DegQ protease family signature 333 345 3.3E-39 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 PRINTS PR00834 HtrA/DegQ protease family signature 191 215 3.3E-39 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 PRINTS PR00834 HtrA/DegQ protease family signature 247 264 3.3E-39 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 PRINTS PR00834 HtrA/DegQ protease family signature 130 142 3.3E-39 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 PRINTS PR00834 HtrA/DegQ protease family signature 151 171 3.3E-39 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 SMART SM00228 293 375 2.3E-11 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 SMART SM00228 410 489 0.11 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 Pfam PF13365 Trypsin-like peptidase domain 121 254 6.6E-32 T 13-10-2018 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 Gene3D G3DSA:2.40.10.120 57 287 3.0E-73 T 13-10-2018 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 SUPERFAMILY SSF50156 251 376 8.41E-23 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 58 495 3.2E-131 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Atc_0575 e3e04b90f2ff60e755a9a01ce91b913c 501 SUPERFAMILY SSF50494 57 285 4.89E-60 T 13-10-2018 IPR009003 Peptidase S1, PA clan Atc_0625 06fb49e55567f7c9fd35dae2d017bf68 173 ProSitePatterns PS00113 Adenylate kinase signature. 37 48 - T 13-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atc_0625 06fb49e55567f7c9fd35dae2d017bf68 173 Pfam PF05191 Adenylate kinase, active site lid 83 118 1.5E-16 T 13-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Atc_0625 06fb49e55567f7c9fd35dae2d017bf68 173 Gene3D G3DSA:3.40.50.300 1 172 1.1E-51 T 13-10-2018 Atc_0625 06fb49e55567f7c9fd35dae2d017bf68 173 PRINTS PR00094 Adenylate kinase signature 133 147 2.2E-6 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atc_0625 06fb49e55567f7c9fd35dae2d017bf68 173 PRINTS PR00094 Adenylate kinase signature 2 16 2.2E-6 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atc_0625 06fb49e55567f7c9fd35dae2d017bf68 173 PRINTS PR00094 Adenylate kinase signature 116 131 2.2E-6 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atc_0625 06fb49e55567f7c9fd35dae2d017bf68 173 TIGRFAM TIGR01351 adk: adenylate kinase 1 167 3.8E-50 T 13-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Atc_0625 06fb49e55567f7c9fd35dae2d017bf68 173 Pfam PF00406 Adenylate kinase 1 143 1.9E-29 T 13-10-2018 Atc_0625 06fb49e55567f7c9fd35dae2d017bf68 173 SUPERFAMILY SSF52540 2 169 7.09E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0625 06fb49e55567f7c9fd35dae2d017bf68 173 Hamap MF_00235 Adenylate kinase [adk]. 1 169 32.297 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atc_0029 da8daf8bc09f68149885eb02174151d4 159 Pfam PF00430 ATP synthase B/B' CF(0) 9 139 5.0E-38 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Atc_0029 da8daf8bc09f68149885eb02174151d4 159 Hamap MF_01398 ATP synthase subunit b [atpF]. 5 141 13.037 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Atc_0029 da8daf8bc09f68149885eb02174151d4 159 Gene3D G3DSA:1.20.5.620 65 125 1.2E-13 T 13-10-2018 Atc_0029 da8daf8bc09f68149885eb02174151d4 159 SUPERFAMILY SSF81573 65 124 5.17E-13 T 13-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Atc_0029 da8daf8bc09f68149885eb02174151d4 159 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 13 159 1.9E-52 T 13-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Atc_1316 097207fa19788eee0e31f8dc969c9a24 593 Pfam PF00474 Sodium:solute symporter family 119 481 2.3E-14 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Atc_1316 097207fa19788eee0e31f8dc969c9a24 593 Gene3D G3DSA:1.20.1730.10 110 571 6.6E-25 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily Atc_1316 097207fa19788eee0e31f8dc969c9a24 593 Pfam PF11755 Protein of unknown function (DUF3311) 22 50 6.4E-8 T 13-10-2018 IPR021741 Protein of unknown function DUF3311 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 SUPERFAMILY SSF51419 1 211 2.49E-55 T 13-10-2018 IPR029066 PLP-binding barrel Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 2 12 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 Gene3D G3DSA:2.40.37.10 195 332 5.0E-100 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 TIGRFAM TIGR00492 alr: alanine racemase 1 334 3.7E-83 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 SUPERFAMILY SSF50621 203 334 2.79E-39 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 Gene3D G3DSA:3.20.20.10 1 194 5.0E-100 T 13-10-2018 IPR029066 PLP-binding barrel Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 Pfam PF01168 Alanine racemase, N-terminal domain 1 196 2.3E-49 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 Hamap MF_01201 Alanine racemase. 1 334 25.326 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 SMART SM01005 210 334 2.1E-47 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 Pfam PF00842 Alanine racemase, C-terminal domain 210 332 2.3E-35 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 PRINTS PR00992 Alanine racemase signature 33 51 7.5E-45 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 PRINTS PR00992 Alanine racemase signature 226 241 7.5E-45 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 PRINTS PR00992 Alanine racemase signature 316 329 7.5E-45 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 PRINTS PR00992 Alanine racemase signature 169 196 7.5E-45 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 PRINTS PR00992 Alanine racemase signature 264 281 7.5E-45 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 PRINTS PR00992 Alanine racemase signature 128 139 7.5E-45 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 PRINTS PR00992 Alanine racemase signature 93 105 7.5E-45 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_0235 68b6139eafbe3c960f1e20ca360f370a 335 PRINTS PR00992 Alanine racemase signature 243 258 7.5E-45 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_2656 565ed32f7acbba96efd085618767eeec 448 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 444 4.4E-127 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2656 565ed32f7acbba96efd085618767eeec 448 Pfam PF01225 Mur ligase family, catalytic domain 26 90 3.9E-11 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Atc_2656 565ed32f7acbba96efd085618767eeec 448 SUPERFAMILY SSF53244 313 444 1.21E-37 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_2656 565ed32f7acbba96efd085618767eeec 448 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 445 33.784 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2656 565ed32f7acbba96efd085618767eeec 448 Pfam PF08245 Mur ligase middle domain 106 292 3.9E-46 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Atc_2656 565ed32f7acbba96efd085618767eeec 448 Gene3D G3DSA:3.40.1190.10 82 310 7.2E-73 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_2656 565ed32f7acbba96efd085618767eeec 448 Gene3D G3DSA:3.40.1390.10 1 81 4.2E-22 T 13-10-2018 Atc_2656 565ed32f7acbba96efd085618767eeec 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 396 2.2E-12 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Atc_2656 565ed32f7acbba96efd085618767eeec 448 SUPERFAMILY SSF63418 1 97 3.53E-22 T 13-10-2018 IPR035911 MurE/MurF, N-terminal Atc_2656 565ed32f7acbba96efd085618767eeec 448 Gene3D G3DSA:3.90.190.20 312 448 1.8E-42 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_2656 565ed32f7acbba96efd085618767eeec 448 SUPERFAMILY SSF53623 103 309 1.07E-52 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_m213 7e507f2d67dcd0da7baeca38c05af9c4 768 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 159 1.2E-7 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Atc_m213 7e507f2d67dcd0da7baeca38c05af9c4 768 SUPERFAMILY SSF56935 48 768 6.23E-76 T 13-10-2018 Atc_m213 7e507f2d67dcd0da7baeca38c05af9c4 768 Pfam PF00593 TonB dependent receptor 277 766 6.7E-38 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atc_m213 7e507f2d67dcd0da7baeca38c05af9c4 768 Gene3D G3DSA:2.170.130.10 59 181 3.5E-12 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atc_m048 b39706b214c48f304472d32ff5a86ac4 679 SUPERFAMILY SSF52540 2 633 2.14E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m048 b39706b214c48f304472d32ff5a86ac4 679 Gene3D G3DSA:3.40.50.300 2 270 2.4E-46 T 13-10-2018 Atc_m048 b39706b214c48f304472d32ff5a86ac4 679 Gene3D G3DSA:3.40.50.300 297 631 4.8E-43 T 13-10-2018 Atc_m048 b39706b214c48f304472d32ff5a86ac4 679 Pfam PF13245 AAA domain 6 262 1.2E-21 T 13-10-2018 Atc_m048 b39706b214c48f304472d32ff5a86ac4 679 Gene3D G3DSA:1.10.486.10 384 549 4.8E-43 T 13-10-2018 Atc_m048 b39706b214c48f304472d32ff5a86ac4 679 Gene3D G3DSA:1.10.10.160 104 194 2.4E-46 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily Atc_m048 b39706b214c48f304472d32ff5a86ac4 679 Pfam PF13361 UvrD-like helicase C-terminal domain 523 622 4.2E-19 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Atc_1103 cc0b94b84847dfb804298c8e545ca975 264 Gene3D G3DSA:3.40.50.300 24 172 4.7E-9 T 13-10-2018 Atc_1103 cc0b94b84847dfb804298c8e545ca975 264 Pfam PF13401 AAA domain 39 168 3.0E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1103 cc0b94b84847dfb804298c8e545ca975 264 SMART SM00382 39 190 0.0041 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1103 cc0b94b84847dfb804298c8e545ca975 264 SUPERFAMILY SSF52540 29 261 1.29E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0758 cc0b94b84847dfb804298c8e545ca975 264 Gene3D G3DSA:3.40.50.300 24 172 4.7E-9 T 13-10-2018 Atc_0758 cc0b94b84847dfb804298c8e545ca975 264 Pfam PF13401 AAA domain 39 168 3.0E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0758 cc0b94b84847dfb804298c8e545ca975 264 SMART SM00382 39 190 0.0041 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0758 cc0b94b84847dfb804298c8e545ca975 264 SUPERFAMILY SSF52540 29 261 1.29E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2167 ddc3822066c2c033651f133fc00233b6 474 PIRSF PIRSF000485 9 468 2.0E-166 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Atc_2167 ddc3822066c2c033651f133fc00233b6 474 SUPERFAMILY SSF53271 249 462 3.41E-71 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Atc_2167 ddc3822066c2c033651f133fc00233b6 474 Gene3D G3DSA:3.40.50.2020 273 437 1.5E-156 T 13-10-2018 Atc_2167 ddc3822066c2c033651f133fc00233b6 474 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 13 455 1.6E-159 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Atc_2167 ddc3822066c2c033651f133fc00233b6 474 SUPERFAMILY SSF56235 13 240 1.72E-66 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_2167 ddc3822066c2c033651f133fc00233b6 474 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 12 454 47.06 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Atc_2167 ddc3822066c2c033651f133fc00233b6 474 Pfam PF13537 Glutamine amidotransferase domain 94 211 1.1E-19 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Atc_2167 ddc3822066c2c033651f133fc00233b6 474 Pfam PF00156 Phosphoribosyl transferase domain 273 386 3.8E-11 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atc_2167 ddc3822066c2c033651f133fc00233b6 474 Gene3D G3DSA:3.60.20.10 13 455 1.5E-156 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_m037 2b3768a31758001b25bd0b1b6d42e966 103 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.5E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_m037 2b3768a31758001b25bd0b1b6d42e966 103 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.5E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_m037 2b3768a31758001b25bd0b1b6d42e966 103 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.5E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_m037 2b3768a31758001b25bd0b1b6d42e966 103 Gene3D G3DSA:4.10.520.10 1 97 2.1E-29 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_m037 2b3768a31758001b25bd0b1b6d42e966 103 SMART SM00411 3 92 9.5E-29 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_m037 2b3768a31758001b25bd0b1b6d42e966 103 SUPERFAMILY SSF47729 2 93 2.65E-27 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_m037 2b3768a31758001b25bd0b1b6d42e966 103 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.0E-25 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_m037 2b3768a31758001b25bd0b1b6d42e966 103 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Atc_2301 1c1dc05937b50b5d9748fc6e314a98ad 264 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 43 243 9.7E-51 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Atc_2301 1c1dc05937b50b5d9748fc6e314a98ad 264 ProSitePatterns PS00760 Signal peptidases I lysine active site. 124 136 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Atc_2301 1c1dc05937b50b5d9748fc6e314a98ad 264 SUPERFAMILY SSF51306 56 257 1.33E-68 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Atc_2301 1c1dc05937b50b5d9748fc6e314a98ad 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 58 74 1.4E-23 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Atc_2301 1c1dc05937b50b5d9748fc6e314a98ad 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 203 222 1.4E-23 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Atc_2301 1c1dc05937b50b5d9748fc6e314a98ad 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 1.4E-23 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Atc_2301 1c1dc05937b50b5d9748fc6e314a98ad 264 Gene3D G3DSA:2.170.230.10 133 202 2.5E-64 T 13-10-2018 Atc_2301 1c1dc05937b50b5d9748fc6e314a98ad 264 Gene3D G3DSA:2.10.109.10 56 243 2.5E-64 T 13-10-2018 Atc_2301 1c1dc05937b50b5d9748fc6e314a98ad 264 Pfam PF10502 Signal peptidase, peptidase S26 201 240 2.4E-5 T 13-10-2018 IPR019533 Peptidase S26 Atc_2301 1c1dc05937b50b5d9748fc6e314a98ad 264 Pfam PF00717 Peptidase S24-like 64 146 6.5E-22 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Atc_0367 1b9d23cb29239e21a3ff029dc82e6945 323 Gene3D G3DSA:3.40.50.10490 2 194 1.1E-63 T 13-10-2018 Atc_0367 1b9d23cb29239e21a3ff029dc82e6945 323 SMART SM00116 209 257 0.0011 T 13-10-2018 IPR000644 CBS domain Atc_0367 1b9d23cb29239e21a3ff029dc82e6945 323 SMART SM00116 274 322 5.8 T 13-10-2018 IPR000644 CBS domain Atc_0367 1b9d23cb29239e21a3ff029dc82e6945 323 Pfam PF00571 CBS domain 269 320 9.0E-6 T 13-10-2018 IPR000644 CBS domain Atc_0367 1b9d23cb29239e21a3ff029dc82e6945 323 Pfam PF00571 CBS domain 200 257 1.4E-8 T 13-10-2018 IPR000644 CBS domain Atc_0367 1b9d23cb29239e21a3ff029dc82e6945 323 Pfam PF01380 SIS domain 40 170 5.0E-30 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atc_0367 1b9d23cb29239e21a3ff029dc82e6945 323 SUPERFAMILY SSF53697 8 320 2.45E-67 T 13-10-2018 Atc_0367 1b9d23cb29239e21a3ff029dc82e6945 323 PIRSF PIRSF004692 1 323 3.7E-131 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Atc_0367 1b9d23cb29239e21a3ff029dc82e6945 323 Gene3D G3DSA:3.10.580.10 195 320 1.8E-41 T 13-10-2018 Atc_0367 1b9d23cb29239e21a3ff029dc82e6945 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 44 312 1.6E-106 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Atc_0313 1107ea36326796bde54ab3d8a3e080d9 577 Gene3D G3DSA:3.90.1640.30 53 326 1.1E-83 T 13-10-2018 Atc_0313 1107ea36326796bde54ab3d8a3e080d9 577 Pfam PF02272 DHHA1 domain 322 447 5.1E-16 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Atc_0313 1107ea36326796bde54ab3d8a3e080d9 577 Gene3D G3DSA:3.10.310.30 327 455 1.2E-27 T 13-10-2018 Atc_0313 1107ea36326796bde54ab3d8a3e080d9 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 563 3.4E-133 T 13-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Atc_0313 1107ea36326796bde54ab3d8a3e080d9 577 Pfam PF01368 DHH family 78 203 8.5E-9 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atc_0313 1107ea36326796bde54ab3d8a3e080d9 577 SUPERFAMILY SSF64182 58 461 7.72E-107 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily Atc_0961 01c5061ca93479a3f6b3711765a67807 165 SUPERFAMILY SSF51206 11 144 3.01E-25 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Atc_0961 01c5061ca93479a3f6b3711765a67807 165 Pfam PF00027 Cyclic nucleotide-binding domain 38 121 1.8E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Atc_0961 01c5061ca93479a3f6b3711765a67807 165 Gene3D G3DSA:2.60.120.10 1 154 3.6E-27 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_0961 01c5061ca93479a3f6b3711765a67807 165 SMART SM00100 18 137 4.2E-11 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Atc_2378 ff5e1e95ce43fea22eccc497ce67fada 214 PIRSF PIRSF016262 4 211 1.0E-51 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atc_2378 ff5e1e95ce43fea22eccc497ce67fada 214 Hamap MF_00013 Octanoyltransferase [lipB]. 6 208 33.91 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atc_2378 ff5e1e95ce43fea22eccc497ce67fada 214 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 29 198 4.5E-54 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atc_2378 ff5e1e95ce43fea22eccc497ce67fada 214 SUPERFAMILY SSF55681 11 206 3.81E-63 T 13-10-2018 Atc_2378 ff5e1e95ce43fea22eccc497ce67fada 214 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 77 130 2.0E-13 T 13-10-2018 Atc_2378 ff5e1e95ce43fea22eccc497ce67fada 214 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 73 88 - T 13-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Atc_2378 ff5e1e95ce43fea22eccc497ce67fada 214 Pfam PF03099 Biotin/lipoate A/B protein ligase family 60 161 8.4E-8 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Atc_2378 ff5e1e95ce43fea22eccc497ce67fada 214 Gene3D G3DSA:3.30.930.10 5 206 8.5E-57 T 13-10-2018 Atc_2623 ab4dcdb4ef22ab7120ae4d7b035c55f1 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 38 223 9.2E-59 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Atc_2623 ab4dcdb4ef22ab7120ae4d7b035c55f1 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 87.25 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Atc_2623 ab4dcdb4ef22ab7120ae4d7b035c55f1 243 Gene3D G3DSA:2.30.210.20 12 66 2.4E-22 T 13-10-2018 Atc_2623 ab4dcdb4ef22ab7120ae4d7b035c55f1 243 SUPERFAMILY SSF55729 16 229 1.8E-83 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atc_2623 ab4dcdb4ef22ab7120ae4d7b035c55f1 243 Gene3D G3DSA:3.40.630.70 67 240 1.7E-60 T 13-10-2018 Atc_2623 ab4dcdb4ef22ab7120ae4d7b035c55f1 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 41 209 3.7E-70 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Atc_0099 fca71ae9115660abc905eb669dc42265 432 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 35 203 7.8E-30 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Atc_0099 fca71ae9115660abc905eb669dc42265 432 Pfam PF02195 ParB-like nuclease domain 38 144 5.1E-18 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_0099 fca71ae9115660abc905eb669dc42265 432 Gene3D G3DSA:1.10.10.2830 132 232 1.3E-14 T 13-10-2018 Atc_0099 fca71ae9115660abc905eb669dc42265 432 SMART SM00470 36 145 1.6E-19 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_0099 fca71ae9115660abc905eb669dc42265 432 Gene3D G3DSA:3.90.1530.30 49 114 3.2E-15 T 13-10-2018 Atc_0099 fca71ae9115660abc905eb669dc42265 432 SUPERFAMILY SSF110849 38 185 6.28E-22 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atc_2274 1883472d9ec02f5d1679ebbda0a283a0 693 Pfam PF13632 Glycosyl transferase family group 2 197 397 5.7E-15 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atc_2274 1883472d9ec02f5d1679ebbda0a283a0 693 SUPERFAMILY SSF53448 100 386 6.53E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2274 1883472d9ec02f5d1679ebbda0a283a0 693 Gene3D G3DSA:3.90.550.10 87 327 1.8E-17 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 SUPERFAMILY SSF53756 1025 1399 1.53E-52 T 13-10-2018 Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 Pfam PF00534 Glycosyl transferases group 1 1210 1377 6.5E-26 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 Pfam PF13578 Methyltransferase domain 85 201 9.0E-23 T 13-10-2018 Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 Pfam PF00535 Glycosyl transferase family 2 489 646 7.5E-23 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 Gene3D G3DSA:3.90.550.10 741 978 1.3E-46 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 Gene3D G3DSA:3.40.50.2000 1165 1396 1.7E-37 T 13-10-2018 Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 Gene3D G3DSA:3.40.50.2000 1193 1384 1.7E-37 T 13-10-2018 Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 Gene3D G3DSA:3.40.50.150 71 237 1.3E-16 T 13-10-2018 Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 Pfam PF13641 Glycosyltransferase like family 2 746 970 8.4E-17 T 13-10-2018 Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 Gene3D G3DSA:3.90.550.10 412 733 5.0E-63 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 SUPERFAMILY SSF53448 488 695 2.6E-51 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 SUPERFAMILY SSF53448 745 988 4.5E-46 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0781 c314d49c190ed5ff188b9f3dc4cb6bf6 1418 SUPERFAMILY SSF53335 60 232 5.4E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2577 1d5e2710b2947fa5eeabd092fdd27e0e 105 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 97 6.8E-10 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Atc_2577 1d5e2710b2947fa5eeabd092fdd27e0e 105 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 12.271 T 13-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Atc_2170 9b9d9c6d3d3a5d9fb1e21b0d1a1124a5 294 SUPERFAMILY SSF52096 33 287 9.95E-88 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atc_2170 9b9d9c6d3d3a5d9fb1e21b0d1a1124a5 294 Pfam PF01039 Carboxyl transferase domain 102 248 2.1E-19 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Atc_2170 9b9d9c6d3d3a5d9fb1e21b0d1a1124a5 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 259 268 2.3E-39 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_2170 9b9d9c6d3d3a5d9fb1e21b0d1a1124a5 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 171 189 2.3E-39 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_2170 9b9d9c6d3d3a5d9fb1e21b0d1a1124a5 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 208 225 2.3E-39 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_2170 9b9d9c6d3d3a5d9fb1e21b0d1a1124a5 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 137 151 2.3E-39 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_2170 9b9d9c6d3d3a5d9fb1e21b0d1a1124a5 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 237 248 2.3E-39 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_2170 9b9d9c6d3d3a5d9fb1e21b0d1a1124a5 294 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 21 289 1.0E-124 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_2170 9b9d9c6d3d3a5d9fb1e21b0d1a1124a5 294 Gene3D G3DSA:3.90.226.10 33 292 3.8E-85 T 13-10-2018 Atc_2170 9b9d9c6d3d3a5d9fb1e21b0d1a1124a5 294 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 289 38.728 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_0023 459a727a5792cdf3918e9852fe6e631f 215 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 23 211 23.875 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Atc_0023 459a727a5792cdf3918e9852fe6e631f 215 Pfam PF02527 rRNA small subunit methyltransferase G 34 192 3.5E-42 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Atc_0023 459a727a5792cdf3918e9852fe6e631f 215 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 35 189 1.8E-40 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Atc_0023 459a727a5792cdf3918e9852fe6e631f 215 Gene3D G3DSA:3.40.50.150 4 210 2.7E-52 T 13-10-2018 Atc_0023 459a727a5792cdf3918e9852fe6e631f 215 SUPERFAMILY SSF53335 25 194 7.7E-27 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0887 ed86f87022848ba3aa9222a7d66410ff 270 SUPERFAMILY SSF52540 2 214 2.43E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0887 ed86f87022848ba3aa9222a7d66410ff 270 Pfam PF00005 ABC transporter 9 154 2.5E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0887 ed86f87022848ba3aa9222a7d66410ff 270 Gene3D G3DSA:3.40.50.300 1 237 1.3E-55 T 13-10-2018 Atc_0887 ed86f87022848ba3aa9222a7d66410ff 270 SMART SM00382 18 204 2.6E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1875 98c8c1474c99215131de45104a49cf5a 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 162 1.0E-18 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atc_1875 98c8c1474c99215131de45104a49cf5a 171 SUPERFAMILY SSF88946 2 72 1.77E-7 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atc_1875 98c8c1474c99215131de45104a49cf5a 171 Pfam PF08281 Sigma-70, region 4 112 159 7.3E-16 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_1875 98c8c1474c99215131de45104a49cf5a 171 SUPERFAMILY SSF88659 90 165 1.29E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_1875 98c8c1474c99215131de45104a49cf5a 171 Gene3D G3DSA:1.10.10.10 89 166 2.5E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1460 77ff0e7baee1596f776a5120c93337c8 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Atc_1460 77ff0e7baee1596f776a5120c93337c8 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 132 3.4E-29 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Atc_1460 77ff0e7baee1596f776a5120c93337c8 137 PIRSF PIRSF002889 1 135 6.2E-35 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Atc_1460 77ff0e7baee1596f776a5120c93337c8 137 Pfam PF00460 Flagella basal body rod protein 25 39 2.1E-4 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Gene3D G3DSA:2.40.270.10 1057 1261 7.5E-92 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Gene3D G3DSA:2.40.270.10 799 841 2.4E-7 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Gene3D G3DSA:3.90.1800.10 1271 1328 8.5E-11 T 13-10-2018 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1361 12.438 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 SUPERFAMILY SSF64484 12 1361 0.0 T 13-10-2018 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Pfam PF00562 RNA polymerase Rpb2, domain 6 728 1283 8.6E-164 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Pfam PF04560 RNA polymerase Rpb2, domain 7 1285 1359 3.2E-26 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Gene3D G3DSA:3.90.1110.10 323 450 3.6E-33 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Gene3D G3DSA:2.40.50.150 842 963 1.3E-43 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 176 228 4.5E-6 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 366 463 8.1E-14 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Gene3D G3DSA:3.90.1100.10 451 640 1.5E-71 T 13-10-2018 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Gene3D G3DSA:3.90.1100.10 18 179 1.5E-52 T 13-10-2018 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Gene3D G3DSA:3.90.1100.10 651 722 1.2E-20 T 13-10-2018 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Pfam PF04565 RNA polymerase Rpb2, domain 3 522 589 2.6E-31 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1085 1097 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Pfam PF10385 RNA polymerase beta subunit external 1 domain 600 665 1.2E-23 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Gene3D G3DSA:2.40.50.100 723 797 1.4E-28 T 13-10-2018 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 Pfam PF04563 RNA polymerase beta subunit 26 508 1.3E-39 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0598 271ebe05c1ebf9a106edd8e74a7d2ad4 1362 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1358 0.0 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0614 079960b44ef2b1b02fa30de39450edd8 91 Pfam PF00366 Ribosomal protein S17 12 78 1.1E-35 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0614 079960b44ef2b1b02fa30de39450edd8 91 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 8 78 5.0E-24 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0614 079960b44ef2b1b02fa30de39450edd8 91 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 8 78 5.0E-39 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0614 079960b44ef2b1b02fa30de39450edd8 91 Gene3D G3DSA:2.40.50.140 3 85 6.1E-38 T 13-10-2018 Atc_0614 079960b44ef2b1b02fa30de39450edd8 91 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 1.1E-14 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0614 079960b44ef2b1b02fa30de39450edd8 91 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 1.1E-14 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0614 079960b44ef2b1b02fa30de39450edd8 91 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 1.1E-14 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0614 079960b44ef2b1b02fa30de39450edd8 91 SUPERFAMILY SSF50249 8 83 8.57E-34 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0614 079960b44ef2b1b02fa30de39450edd8 91 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 82 25.782 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0614 079960b44ef2b1b02fa30de39450edd8 91 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 13-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_2217 c3ca44c120cfb512c1eae50b5e7dd0a1 164 Pfam PF13501 Sulfur oxidation protein SoxY 52 162 3.4E-35 T 13-10-2018 IPR032711 Ig-like SoxY domain Atc_2217 c3ca44c120cfb512c1eae50b5e7dd0a1 164 SUPERFAMILY SSF49367 70 138 3.27E-8 T 13-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Atc_2217 c3ca44c120cfb512c1eae50b5e7dd0a1 164 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 2 164 2.2E-43 T 13-10-2018 IPR016568 Sulphur oxidation, SoxY Atc_2217 c3ca44c120cfb512c1eae50b5e7dd0a1 164 Gene3D G3DSA:2.60.40.2470 33 164 4.4E-37 T 13-10-2018 IPR038162 Ig-like SoxY domain superfamily Atc_2217 c3ca44c120cfb512c1eae50b5e7dd0a1 164 PIRSF PIRSF010312 1 164 5.8E-41 T 13-10-2018 IPR016568 Sulphur oxidation, SoxY Atc_2217 c3ca44c120cfb512c1eae50b5e7dd0a1 164 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 30 2.5E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Atc_0489 cfd792e0b1be2997cfff6a83da8e6bdc 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 214 225 2.8E-15 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atc_0489 cfd792e0b1be2997cfff6a83da8e6bdc 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 238 247 2.8E-15 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atc_0489 cfd792e0b1be2997cfff6a83da8e6bdc 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 336 350 2.8E-15 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atc_0489 cfd792e0b1be2997cfff6a83da8e6bdc 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 110 128 2.8E-15 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atc_0489 cfd792e0b1be2997cfff6a83da8e6bdc 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 48 61 2.8E-15 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atc_0489 cfd792e0b1be2997cfff6a83da8e6bdc 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 176 193 2.8E-15 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atc_0489 cfd792e0b1be2997cfff6a83da8e6bdc 368 Gene3D G3DSA:1.50.10.10 20 365 2.8E-110 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Atc_0489 cfd792e0b1be2997cfff6a83da8e6bdc 368 SUPERFAMILY SSF48208 7 359 2.33E-79 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Atc_0489 cfd792e0b1be2997cfff6a83da8e6bdc 368 Pfam PF01270 Glycosyl hydrolases family 8 14 349 4.2E-54 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atc_0702 dfa5bc28f64f2d8707dd70fa17a4e33c 603 Gene3D G3DSA:2.30.42.10 483 588 2.7E-16 T 13-10-2018 Atc_0702 dfa5bc28f64f2d8707dd70fa17a4e33c 603 Gene3D G3DSA:1.10.390.60 179 443 1.5E-79 T 13-10-2018 Atc_0702 dfa5bc28f64f2d8707dd70fa17a4e33c 603 Pfam PF13180 PDZ domain 484 555 1.4E-6 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_0702 dfa5bc28f64f2d8707dd70fa17a4e33c 603 SUPERFAMILY SSF55486 186 445 9.52E-16 T 13-10-2018 Atc_0702 dfa5bc28f64f2d8707dd70fa17a4e33c 603 Pfam PF05299 M61 glycyl aminopeptidase 267 382 1.6E-36 T 13-10-2018 IPR007963 Peptidase M61, catalytic domain Atc_0702 dfa5bc28f64f2d8707dd70fa17a4e33c 603 Gene3D G3DSA:2.60.40.3650 9 177 2.1E-50 T 13-10-2018 Atc_0702 dfa5bc28f64f2d8707dd70fa17a4e33c 603 SMART SM00228 482 551 4.4E-5 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_0702 dfa5bc28f64f2d8707dd70fa17a4e33c 603 PIRSF PIRSF016493 4 589 5.1E-167 T 13-10-2018 IPR024191 Peptidase M61 Atc_0702 dfa5bc28f64f2d8707dd70fa17a4e33c 603 SUPERFAMILY SSF50156 486 562 1.73E-10 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Atc_0515 9aa4fb681422f344f16d24735dfedf58 389 Gene3D G3DSA:1.25.10.10 235 371 1.8E-11 T 13-10-2018 IPR011989 Armadillo-like helical Atc_0515 9aa4fb681422f344f16d24735dfedf58 389 SUPERFAMILY SSF48371 62 360 7.92E-11 T 13-10-2018 IPR016024 Armadillo-type fold Atc_0515 9aa4fb681422f344f16d24735dfedf58 389 SUPERFAMILY SSF48371 248 349 3.45E-12 T 13-10-2018 IPR016024 Armadillo-type fold Atc_0515 9aa4fb681422f344f16d24735dfedf58 389 Pfam PF13646 HEAT repeats 289 365 2.2E-8 T 13-10-2018 Atc_1177 c7d8abc08245300a9c3ca8cc71ebec84 122 SUPERFAMILY SSF47598 72 107 1.87E-5 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atc_1177 c7d8abc08245300a9c3ca8cc71ebec84 122 SUPERFAMILY SSF143100 1 76 8.89E-10 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Atc_1177 c7d8abc08245300a9c3ca8cc71ebec84 122 Pfam PF05534 HicB family 55 99 1.1E-14 T 13-10-2018 IPR008651 Uncharacterised protein family HicB Atc_2163 3763fd82bb30fe0b95924518c5c03457 346 Gene3D G3DSA:3.40.1780.10 15 338 6.1E-113 T 13-10-2018 Atc_2163 3763fd82bb30fe0b95924518c5c03457 346 SUPERFAMILY SSF111337 1 339 1.44E-129 T 13-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Atc_2163 3763fd82bb30fe0b95924518c5c03457 346 Gene3D G3DSA:2.40.10.240 64 161 6.1E-113 T 13-10-2018 Atc_2163 3763fd82bb30fe0b95924518c5c03457 346 Pfam PF02547 Queuosine biosynthesis protein 4 338 3.1E-129 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Atc_2163 3763fd82bb30fe0b95924518c5c03457 346 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 339 7.3E-130 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Atc_2163 3763fd82bb30fe0b95924518c5c03457 346 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 339 46.014 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Atc_1730 9247c73b880dfcb520387a7d24277a30 181 Gene3D G3DSA:2.30.30.60 124 172 2.1E-7 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Atc_1730 9247c73b880dfcb520387a7d24277a30 181 SUPERFAMILY SSF50182 109 173 7.52E-12 T 13-10-2018 IPR010920 LSM domain superfamily Atc_1730 9247c73b880dfcb520387a7d24277a30 181 Pfam PF00924 Mechanosensitive ion channel 69 170 2.8E-14 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Atc_0387 c62c33d97c89e4491ea28ca3eb8b82cb 302 Gene3D G3DSA:3.40.50.720 14 283 1.3E-97 T 13-10-2018 Atc_0387 c62c33d97c89e4491ea28ca3eb8b82cb 302 SUPERFAMILY SSF51735 13 294 4.93E-93 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0387 c62c33d97c89e4491ea28ca3eb8b82cb 302 Pfam PF04321 RmlD substrate binding domain 13 295 2.2E-93 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Atc_0387 c62c33d97c89e4491ea28ca3eb8b82cb 302 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 13 294 6.6E-97 T 13-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Atc_0387 c62c33d97c89e4491ea28ca3eb8b82cb 302 Gene3D G3DSA:3.90.25.10 170 290 1.3E-97 T 13-10-2018 Atc_0209 4be9c3ec3a9a853f557da9339870198a 383 SUPERFAMILY SSF53756 1 369 1.12E-54 T 13-10-2018 Atc_0209 4be9c3ec3a9a853f557da9339870198a 383 Pfam PF13439 Glycosyltransferase Family 4 51 191 8.7E-8 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atc_0209 4be9c3ec3a9a853f557da9339870198a 383 Pfam PF00534 Glycosyl transferases group 1 197 356 1.3E-22 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Atc_0209 4be9c3ec3a9a853f557da9339870198a 383 Gene3D G3DSA:3.40.50.2000 179 354 2.2E-29 T 13-10-2018 Atc_1395 66550d070d9332d28ca5a43008582128 90 SUPERFAMILY SSF47729 4 82 1.77E-25 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_1395 66550d070d9332d28ca5a43008582128 90 Gene3D G3DSA:4.10.520.10 1 85 1.1E-26 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_1395 66550d070d9332d28ca5a43008582128 90 SMART SM00411 1 82 3.4E-26 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_1395 66550d070d9332d28ca5a43008582128 90 PRINTS PR01727 Prokaryotic integration host factor signature 50 63 4.2E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_1395 66550d070d9332d28ca5a43008582128 90 PRINTS PR01727 Prokaryotic integration host factor signature 66 80 4.2E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_1395 66550d070d9332d28ca5a43008582128 90 PRINTS PR01727 Prokaryotic integration host factor signature 32 47 4.2E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_1395 66550d070d9332d28ca5a43008582128 90 Pfam PF00216 Bacterial DNA-binding protein 6 81 8.2E-25 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2595 beb177c754d263ac11300c776a005ede 166 SMART SM01001 4 155 2.9E-93 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Atc_2595 beb177c754d263ac11300c776a005ede 166 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 157 6.0E-61 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Atc_2595 beb177c754d263ac11300c776a005ede 166 SUPERFAMILY SSF52255 5 158 9.94E-62 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Atc_2595 beb177c754d263ac11300c776a005ede 166 PIRSF PIRSF001338 1 160 1.1E-61 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Atc_2595 beb177c754d263ac11300c776a005ede 166 Pfam PF00731 AIR carboxylase 7 152 2.4E-60 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Atc_2595 beb177c754d263ac11300c776a005ede 166 Gene3D G3DSA:3.40.50.7700 1 164 6.9E-67 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Atc_2595 beb177c754d263ac11300c776a005ede 166 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 159 30.788 T 13-10-2018 IPR033747 Class I PurE Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 SUPERFAMILY SSF56553 52 174 4.36E-38 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 Gene3D G3DSA:3.30.1360.10 19 224 1.5E-78 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 7.0E-28 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 SMART SM00662 22 230 4.8E-84 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 23 314 1.7E-106 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 4 315 34.291 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 224 4.9E-21 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 Gene3D G3DSA:2.170.120.12 52 173 1.5E-78 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 247 306 4.3E-24 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 Gene3D G3DSA:1.10.150.20 244 326 1.3E-34 T 13-10-2018 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 153 6.9E-21 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 SUPERFAMILY SSF55257 18 228 1.47E-25 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_0632 f7d23dfadbcc7d0a147525acc49defb0 339 SUPERFAMILY SSF47789 248 323 6.28E-26 T 13-10-2018 Atc_0451 9e1b3869b9c60314e97a8abb79f3d87d 825 Pfam PF00912 Transglycosylase 64 241 2.9E-51 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_0451 9e1b3869b9c60314e97a8abb79f3d87d 825 Gene3D G3DSA:2.40.50.140 335 431 6.3E-8 T 13-10-2018 Atc_0451 9e1b3869b9c60314e97a8abb79f3d87d 825 Gene3D G3DSA:3.40.710.10 304 318 6.4E-73 T 13-10-2018 Atc_0451 9e1b3869b9c60314e97a8abb79f3d87d 825 Gene3D G3DSA:1.10.3810.10 73 267 6.4E-73 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_0451 9e1b3869b9c60314e97a8abb79f3d87d 825 Pfam PF00905 Penicillin binding protein transpeptidase domain 462 728 3.5E-19 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atc_0451 9e1b3869b9c60314e97a8abb79f3d87d 825 Gene3D G3DSA:3.40.710.10 446 793 7.2E-100 T 13-10-2018 Atc_0451 9e1b3869b9c60314e97a8abb79f3d87d 825 Pfam PF17092 Penicillin-binding protein OB-like domain 334 460 8.9E-18 T 13-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_0451 9e1b3869b9c60314e97a8abb79f3d87d 825 Gene3D G3DSA:3.90.1310.20 58 303 6.4E-73 T 13-10-2018 Atc_0451 9e1b3869b9c60314e97a8abb79f3d87d 825 SUPERFAMILY SSF53955 51 266 1.74E-62 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_0451 9e1b3869b9c60314e97a8abb79f3d87d 825 SUPERFAMILY SSF56601 223 807 3.82E-105 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_m053 630701282ab84282ebfb25596c207142 163 Pfam PF13673 Acetyltransferase (GNAT) domain 85 145 5.0E-8 T 13-10-2018 IPR000182 GNAT domain Atc_m053 630701282ab84282ebfb25596c207142 163 SUPERFAMILY SSF55729 18 146 2.13E-14 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atc_m053 630701282ab84282ebfb25596c207142 163 Gene3D G3DSA:3.40.630.30 1 157 2.2E-46 T 13-10-2018 Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 195 7.1E-33 T 13-10-2018 Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 189 3.9E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 Gene3D G3DSA:3.40.50.1000 13 216 2.2E-62 T 13-10-2018 IPR023214 HAD superfamily Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 72 194 2.9E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 4.4E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 4.4E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 4.4E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 4.4E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 Gene3D G3DSA:1.10.150.240 25 94 2.2E-62 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 SUPERFAMILY SSF56784 9 225 4.94E-62 T 13-10-2018 IPR036412 HAD-like superfamily Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 13 224 1.6E-67 T 13-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Atc_0078 4f657ae848f2e1d9127548ee17386d5f 236 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 10 225 36.076 T 13-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Atc_0152 89daa5006ee9aea0047d77c5a114cd28 373 Gene3D G3DSA:2.30.40.20 31 83 4.2E-64 T 13-10-2018 Atc_0152 89daa5006ee9aea0047d77c5a114cd28 373 Pfam PF00817 impB/mucB/samB family 17 164 5.4E-52 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atc_0152 89daa5006ee9aea0047d77c5a114cd28 373 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 352 3.4E-17 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atc_0152 89daa5006ee9aea0047d77c5a114cd28 373 Gene3D G3DSA:3.30.70.270 14 174 4.2E-64 T 13-10-2018 Atc_0152 89daa5006ee9aea0047d77c5a114cd28 373 Gene3D G3DSA:1.10.150.20 176 238 9.0E-19 T 13-10-2018 Atc_0152 89daa5006ee9aea0047d77c5a114cd28 373 Gene3D G3DSA:3.30.1490.100 247 364 7.0E-25 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atc_0152 89daa5006ee9aea0047d77c5a114cd28 373 Hamap MF_01113 DNA polymerase IV [dinB]. 11 365 38.818 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Atc_0152 89daa5006ee9aea0047d77c5a114cd28 373 SUPERFAMILY SSF100879 248 348 3.73E-24 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atc_0152 89daa5006ee9aea0047d77c5a114cd28 373 Pfam PF11798 IMS family HHH motif 176 207 5.9E-7 T 13-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Atc_0152 89daa5006ee9aea0047d77c5a114cd28 373 SUPERFAMILY SSF56672 11 244 6.32E-90 T 13-10-2018 Atc_0410 8a1423412b72e705fca4025959d10e01 375 Gene3D G3DSA:3.20.20.70 85 356 7.3E-69 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0410 8a1423412b72e705fca4025959d10e01 375 Pfam PF00793 DAHP synthetase I family 94 348 3.8E-42 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Atc_0410 8a1423412b72e705fca4025959d10e01 375 Gene3D G3DSA:3.30.70.1140 1 84 2.2E-6 T 13-10-2018 Atc_0410 8a1423412b72e705fca4025959d10e01 375 SUPERFAMILY SSF51569 14 360 2.11E-72 T 13-10-2018 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 Gene3D G3DSA:3.40.50.620 24 632 3.1E-237 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_1735 4f74e24f645d20046b51618e04ceba09 937 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 928 20.494 T 13-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 SUPERFAMILY SSF50677 234 401 1.0E-48 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 Gene3D G3DSA:1.10.730.20 643 928 2.0E-88 T 13-10-2018 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 236 259 3.7E-34 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 564 573 3.7E-34 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 3.7E-34 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 3.7E-34 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 530 543 3.7E-34 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 Pfam PF08264 Anticodon-binding domain of tRNA 688 842 3.2E-27 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 Gene3D G3DSA:3.90.740.10 194 406 3.1E-237 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 842 1.2E-271 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 SUPERFAMILY SSF47323 655 928 3.74E-67 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 643 9.4E-194 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 SUPERFAMILY SSF52374 1 649 2.1E-138 T 13-10-2018 Atc_1735 4f74e24f645d20046b51618e04ceba09 937 Pfam PF06827 Zinc finger found in FPG and IleRS 899 925 4.4E-5 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Atc_m110 7fe173048af8676a4aa2c8072a553b76 254 Gene3D G3DSA:1.10.10.10 16 118 7.7E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_m110 7fe173048af8676a4aa2c8072a553b76 254 SMART SM00418 35 114 9.8E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_m110 7fe173048af8676a4aa2c8072a553b76 254 SUPERFAMILY SSF46785 26 114 2.17E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_m110 7fe173048af8676a4aa2c8072a553b76 254 Pfam PF12840 Helix-turn-helix domain 38 91 1.2E-9 T 13-10-2018 Atc_0457 8d75ae979e84d0d780da3758269b9326 223 Gene3D G3DSA:1.10.10.10 123 221 2.4E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0457 8d75ae979e84d0d780da3758269b9326 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 217 8.1E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_0457 8d75ae979e84d0d780da3758269b9326 223 Pfam PF00072 Response regulator receiver domain 4 112 2.0E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0457 8d75ae979e84d0d780da3758269b9326 223 SMART SM00448 1 112 5.0E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0457 8d75ae979e84d0d780da3758269b9326 223 SUPERFAMILY SSF52172 2 118 1.35E-32 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0457 8d75ae979e84d0d780da3758269b9326 223 SUPERFAMILY SSF46894 119 219 1.45E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atc_0457 8d75ae979e84d0d780da3758269b9326 223 SMART SM00862 148 219 3.9E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_0457 8d75ae979e84d0d780da3758269b9326 223 Gene3D G3DSA:3.40.50.2300 1 122 2.6E-35 T 13-10-2018 Atc_0086 e0530efb5d6ef15901d9236a0b89473c 115 SUPERFAMILY SSF52833 16 114 1.12E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0086 e0530efb5d6ef15901d9236a0b89473c 115 Gene3D G3DSA:3.40.30.10 16 115 1.1E-25 T 13-10-2018 Atc_m130 0ace0a2d08f63dbd6d009db1b42a6e6a 256 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 170 182 3.9E-10 T 13-10-2018 Atc_m130 0ace0a2d08f63dbd6d009db1b42a6e6a 256 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 182 206 3.9E-10 T 13-10-2018 Atc_m130 0ace0a2d08f63dbd6d009db1b42a6e6a 256 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 106 120 3.9E-10 T 13-10-2018 Atc_m130 0ace0a2d08f63dbd6d009db1b42a6e6a 256 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 82 98 3.9E-10 T 13-10-2018 Atc_m130 0ace0a2d08f63dbd6d009db1b42a6e6a 256 SUPERFAMILY SSF53335 78 250 2.39E-23 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_m130 0ace0a2d08f63dbd6d009db1b42a6e6a 256 Gene3D G3DSA:3.40.50.150 59 230 1.6E-19 T 13-10-2018 Atc_m130 0ace0a2d08f63dbd6d009db1b42a6e6a 256 Pfam PF05175 Methyltransferase small domain 94 208 4.0E-7 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Atc_m130 0ace0a2d08f63dbd6d009db1b42a6e6a 256 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 173 179 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_1981 dadcbfe9f691b86c17ea0e35c0a08b43 105 Gene3D G3DSA:3.30.70.120 1 103 5.7E-25 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Atc_1981 dadcbfe9f691b86c17ea0e35c0a08b43 105 SUPERFAMILY SSF54913 4 102 2.0E-23 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Atc_1981 dadcbfe9f691b86c17ea0e35c0a08b43 105 Pfam PF02641 Uncharacterized ACR, COG1993 6 99 1.5E-23 T 13-10-2018 IPR003793 Domain of unknown function DUF190 Atc_0955 8f2ae8902d49ddea176980ab98bc637a 393 SUPERFAMILY SSF53383 4 391 2.29E-113 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_0955 8f2ae8902d49ddea176980ab98bc637a 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Atc_0955 8f2ae8902d49ddea176980ab98bc637a 393 Gene3D G3DSA:3.90.1150.10 25 386 9.0E-131 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_0955 8f2ae8902d49ddea176980ab98bc637a 393 Gene3D G3DSA:3.40.640.10 64 287 9.0E-131 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_0955 8f2ae8902d49ddea176980ab98bc637a 393 Pfam PF00155 Aminotransferase class I and II 33 387 9.2E-70 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atc_0435 a5a8165d9bc359d180a5cc153bf7b4d3 328 SUPERFAMILY SSF53335 168 319 3.41E-14 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0963 c429c107b6ec7da8342cb4441a235a25 399 SUPERFAMILY SSF102114 8 384 4.71E-105 T 13-10-2018 Atc_0963 c429c107b6ec7da8342cb4441a235a25 399 SMART SM00729 9 225 1.0E-46 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atc_0963 c429c107b6ec7da8342cb4441a235a25 399 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 353 6.7E-96 T 13-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Atc_0963 c429c107b6ec7da8342cb4441a235a25 399 Pfam PF06969 HemN C-terminal domain 311 373 4.4E-13 T 13-10-2018 IPR010723 HemN, C-terminal Atc_0963 c429c107b6ec7da8342cb4441a235a25 399 Pfam PF04055 Radical SAM superfamily 14 175 3.8E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_0963 c429c107b6ec7da8342cb4441a235a25 399 Gene3D G3DSA:3.80.30.20 2 307 3.6E-93 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Atc_0027 2fd58feceba81038d413c2bd17814117 249 PRINTS PR00123 ATP synthase A subunit signature 181 203 8.4E-15 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0027 2fd58feceba81038d413c2bd17814117 249 PRINTS PR00123 ATP synthase A subunit signature 228 243 8.4E-15 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0027 2fd58feceba81038d413c2bd17814117 249 PRINTS PR00123 ATP synthase A subunit signature 85 101 8.4E-15 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0027 2fd58feceba81038d413c2bd17814117 249 Pfam PF00119 ATP synthase A chain 28 241 2.8E-49 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0027 2fd58feceba81038d413c2bd17814117 249 SUPERFAMILY SSF81336 81 241 1.96E-38 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0027 2fd58feceba81038d413c2bd17814117 249 Hamap MF_01393 ATP synthase subunit a [atpB]. 7 248 14.202 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0027 2fd58feceba81038d413c2bd17814117 249 Gene3D G3DSA:1.20.120.220 78 249 3.1E-52 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0027 2fd58feceba81038d413c2bd17814117 249 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 19 242 3.5E-39 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0027 2fd58feceba81038d413c2bd17814117 249 ProSitePatterns PS00449 ATP synthase a subunit signature. 184 193 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 Gene3D G3DSA:3.40.50.720 3 247 2.0E-59 T 13-10-2018 Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 4.7E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 4.7E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 4.7E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 7.4E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 7.4E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 7.4E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.4E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 7.4E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 Pfam PF00106 short chain dehydrogenase 7 185 4.2E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0870 39985cbda4e24bc8318993bfb6bdfa38 249 SUPERFAMILY SSF51735 4 235 1.48E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1679 d1e12c8fa33c5ea4306a5f489a05b47e 66 Pfam PF02597 ThiS family 3 66 6.0E-16 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Atc_1679 d1e12c8fa33c5ea4306a5f489a05b47e 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.5E-21 T 13-10-2018 IPR010035 ThiS, thiamine-biosynthesis Atc_1679 d1e12c8fa33c5ea4306a5f489a05b47e 66 Gene3D G3DSA:3.10.20.30 2 66 1.1E-21 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Atc_1679 d1e12c8fa33c5ea4306a5f489a05b47e 66 SUPERFAMILY SSF54285 3 65 8.64E-18 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Atc_2648 45b20bbc126970e1b07c34fb3fe8ba3e 585 Pfam PF00501 AMP-binding enzyme 19 453 1.6E-95 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atc_2648 45b20bbc126970e1b07c34fb3fe8ba3e 585 Gene3D G3DSA:3.40.50.12780 304 447 5.6E-44 T 13-10-2018 Atc_2648 45b20bbc126970e1b07c34fb3fe8ba3e 585 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 13-10-2018 IPR020845 AMP-binding, conserved site Atc_2648 45b20bbc126970e1b07c34fb3fe8ba3e 585 Gene3D G3DSA:3.30.300.30 450 572 3.1E-7 T 13-10-2018 Atc_2648 45b20bbc126970e1b07c34fb3fe8ba3e 585 Gene3D G3DSA:3.40.50.12780 20 301 1.3E-54 T 13-10-2018 Atc_2648 45b20bbc126970e1b07c34fb3fe8ba3e 585 SUPERFAMILY SSF56801 17 572 8.77E-121 T 13-10-2018 Atc_2612 58cd35fea5d58bf16cc5d3bba0efd636 337 Gene3D G3DSA:2.40.30.170 204 326 6.8E-37 T 13-10-2018 Atc_2612 58cd35fea5d58bf16cc5d3bba0efd636 337 Pfam PF00529 HlyD membrane-fusion protein of T1SS 269 323 6.9E-8 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_2612 58cd35fea5d58bf16cc5d3bba0efd636 337 Gene3D G3DSA:2.40.50.100 41 98 1.1E-10 T 13-10-2018 Atc_2612 58cd35fea5d58bf16cc5d3bba0efd636 337 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 131 268 4.0E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_2612 58cd35fea5d58bf16cc5d3bba0efd636 337 SUPERFAMILY SSF111369 106 247 8.24E-7 T 13-10-2018 Atc_2612 58cd35fea5d58bf16cc5d3bba0efd636 337 Gene3D G3DSA:1.10.287.470 99 194 1.4E-5 T 13-10-2018 Atc_2612 58cd35fea5d58bf16cc5d3bba0efd636 337 Pfam PF13533 Biotin-lipoyl like 43 90 1.2E-13 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Atc_2612 58cd35fea5d58bf16cc5d3bba0efd636 337 SUPERFAMILY SSF111369 40 118 7.85E-11 T 13-10-2018 Atc_0002 1dcd6373a8d0309e859037921e96c99d 365 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 365 4.8E-86 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Atc_0002 1dcd6373a8d0309e859037921e96c99d 365 SUPERFAMILY SSF55979 244 365 2.24E-27 T 13-10-2018 Atc_0002 1dcd6373a8d0309e859037921e96c99d 365 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 244 364 7.7E-24 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Atc_0002 1dcd6373a8d0309e859037921e96c99d 365 Gene3D G3DSA:3.10.150.10 1 241 1.5E-96 T 13-10-2018 Atc_0002 1dcd6373a8d0309e859037921e96c99d 365 Gene3D G3DSA:3.70.10.10 137 363 1.5E-96 T 13-10-2018 Atc_0002 1dcd6373a8d0309e859037921e96c99d 365 SUPERFAMILY SSF55979 1 116 2.72E-23 T 13-10-2018 Atc_0002 1dcd6373a8d0309e859037921e96c99d 365 SMART SM00480 17 361 4.3E-80 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Atc_0002 1dcd6373a8d0309e859037921e96c99d 365 PIRSF PIRSF000804 1 365 3.4E-99 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Atc_0002 1dcd6373a8d0309e859037921e96c99d 365 SUPERFAMILY SSF55979 129 243 6.99E-21 T 13-10-2018 Atc_0002 1dcd6373a8d0309e859037921e96c99d 365 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 242 1.2E-23 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Atc_0002 1dcd6373a8d0309e859037921e96c99d 365 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 117 1.0E-25 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Atc_2534 5af759d099236a093800b20cebf73bab 454 SUPERFAMILY SSF53738 2 167 1.1E-49 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 436 9.0E-178 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 362 6.8E-29 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 Gene3D G3DSA:3.40.120.10 3 155 2.6E-47 T 13-10-2018 Atc_2534 5af759d099236a093800b20cebf73bab 454 Gene3D G3DSA:3.40.120.10 258 338 2.4E-58 T 13-10-2018 Atc_2534 5af759d099236a093800b20cebf73bab 454 SUPERFAMILY SSF55957 357 436 2.62E-17 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 443 44.744 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 1.4E-43 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 2.4E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 2.4E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 2.4E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 7.8E-16 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 SUPERFAMILY SSF53738 157 257 7.85E-27 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 Gene3D G3DSA:3.30.310.50 369 442 5.8E-19 T 13-10-2018 Atc_2534 5af759d099236a093800b20cebf73bab 454 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 383 430 4.5E-11 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2534 5af759d099236a093800b20cebf73bab 454 Gene3D G3DSA:3.40.120.10 175 361 2.4E-58 T 13-10-2018 Atc_2534 5af759d099236a093800b20cebf73bab 454 SUPERFAMILY SSF53738 259 364 3.1E-27 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_2440 e2a3241b66a2199177b98f2ff021bbbb 424 SMART SM01329 21 418 4.2E-170 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Atc_2440 e2a3241b66a2199177b98f2ff021bbbb 424 Gene3D G3DSA:3.40.718.10 1 422 1.0E-169 T 13-10-2018 Atc_2440 e2a3241b66a2199177b98f2ff021bbbb 424 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 22 417 2.8E-107 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Atc_2440 e2a3241b66a2199177b98f2ff021bbbb 424 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 309 328 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Atc_2440 e2a3241b66a2199177b98f2ff021bbbb 424 SUPERFAMILY SSF53659 4 421 2.52E-134 T 13-10-2018 Atc_2440 e2a3241b66a2199177b98f2ff021bbbb 424 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 421 9.6E-187 T 13-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Atc_2697 c761601278589de02aca6004ad17ec0c 120 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 18 120 26.867 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2697 c761601278589de02aca6004ad17ec0c 120 ProSitePatterns PS01169 Ribosomal protein L21 signature. 89 111 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_2697 c761601278589de02aca6004ad17ec0c 120 TIGRFAM TIGR00061 L21: ribosomal protein bL21 19 118 9.5E-37 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2697 c761601278589de02aca6004ad17ec0c 120 Pfam PF00829 Ribosomal prokaryotic L21 protein 18 118 4.6E-40 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2697 c761601278589de02aca6004ad17ec0c 120 SUPERFAMILY SSF141091 18 118 1.44E-37 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2066 5b59ffb3105ada493f4a56c7e43d6359 108 Pfam PF05280 Flagellar transcriptional activator (FlhC) 13 94 1.1E-6 T 13-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 Atc_2066 5b59ffb3105ada493f4a56c7e43d6359 108 SUPERFAMILY SSF160930 12 84 1.01E-5 T 13-10-2018 Atc_2831 9c25a0939f39cbc7516323f40d5e5cef 72 Pfam PF01809 Haemolytic domain 7 71 3.8E-30 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Atc_2831 9c25a0939f39cbc7516323f40d5e5cef 72 SMART SM01234 4 71 1.8E-43 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Atc_2831 9c25a0939f39cbc7516323f40d5e5cef 72 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 19 71 1.0E-17 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Atc_2831 9c25a0939f39cbc7516323f40d5e5cef 72 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 4 72 24.456 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Atc_2831 9c25a0939f39cbc7516323f40d5e5cef 72 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 9 72 3.3E-26 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Atc_0596 431f3307636ac2df73b5044aa81f21f9 173 Gene3D G3DSA:3.30.70.1730 4 133 2.8E-35 T 13-10-2018 Atc_0596 431f3307636ac2df73b5044aa81f21f9 173 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 25.396 T 13-10-2018 IPR022973 Ribosomal protein L10 Atc_0596 431f3307636ac2df73b5044aa81f21f9 173 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 26 143 2.0E-6 T 13-10-2018 Atc_0596 431f3307636ac2df73b5044aa81f21f9 173 SUPERFAMILY SSF160369 4 171 2.75E-52 T 13-10-2018 Atc_0596 431f3307636ac2df73b5044aa81f21f9 173 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 13-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0596 431f3307636ac2df73b5044aa81f21f9 173 Pfam PF00466 Ribosomal protein L10 6 100 4.3E-23 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Atc_2431 faf055a8df197ba79d8db31ed7174947 182 Pfam PF03079 ARD/ARD' family 74 169 2.8E-19 T 13-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Atc_2431 faf055a8df197ba79d8db31ed7174947 182 Gene3D G3DSA:2.60.120.10 5 171 9.0E-41 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_2431 faf055a8df197ba79d8db31ed7174947 182 SUPERFAMILY SSF51182 47 174 2.97E-28 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Atc_2431 faf055a8df197ba79d8db31ed7174947 182 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 176 26.622 T 13-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 Atc_m006 606f805b6302e901ffbec9f523f53ee5 336 Hamap MF_01962 Adenine deaminase. 8 319 68.013 T 13-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Atc_m006 606f805b6302e901ffbec9f523f53ee5 336 Gene3D G3DSA:3.20.20.140 3 334 1.3E-95 T 13-10-2018 Atc_m006 606f805b6302e901ffbec9f523f53ee5 336 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 13 326 2.8E-101 T 13-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 Atc_m006 606f805b6302e901ffbec9f523f53ee5 336 Pfam PF00962 Adenosine/AMP deaminase 12 325 3.3E-70 T 13-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Atc_m006 606f805b6302e901ffbec9f523f53ee5 336 SUPERFAMILY SSF51556 8 326 9.08E-79 T 13-10-2018 IPR032466 Metal-dependent hydrolase Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 SUPERFAMILY SSF81271 279 360 3.92E-36 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 Gene3D G3DSA:3.10.20.30 48 361 1.9E-149 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.034 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 Gene3D G3DSA:1.10.150.300 113 200 1.9E-149 T 13-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 PIRSF PIRSF006641 1 363 1.4E-149 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 SUPERFAMILY SSF52540 5 301 4.43E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.2E-20 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 Gene3D G3DSA:3.40.50.300 4 278 1.9E-149 T 13-10-2018 Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 6.6E-150 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.1E-31 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.1E-31 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.1E-31 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.1E-31 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_0694 5109962b8f56ff8879c1fc5ad95caaa8 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 6.5E-40 T 13-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 189 4.2E-5 T 13-10-2018 Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 Gene3D G3DSA:3.40.50.720 2 262 2.7E-63 T 13-10-2018 Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 Pfam PF00106 short chain dehydrogenase 12 199 6.2E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 SUPERFAMILY SSF51735 9 259 2.28E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 6.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 6.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 6.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.2E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.2E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.2E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.2E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2883 58fbe1dc3fb37e94a4e77adf7c8e0a9b 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.2E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2855 bb094608405b8d6d53896f1a3ff6424a 326 TIGRFAM TIGR00109 hemH: ferrochelatase 2 317 1.7E-86 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Atc_2855 bb094608405b8d6d53896f1a3ff6424a 326 Pfam PF00762 Ferrochelatase 2 317 4.7E-106 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Atc_2855 bb094608405b8d6d53896f1a3ff6424a 326 Hamap MF_00323 Ferrochelatase [hemH]. 1 321 34.181 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Atc_2855 bb094608405b8d6d53896f1a3ff6424a 326 Gene3D G3DSA:3.40.50.1400 164 302 4.4E-92 T 13-10-2018 Atc_2855 bb094608405b8d6d53896f1a3ff6424a 326 ProSitePatterns PS00534 Ferrochelatase signature. 190 210 - T 13-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Atc_2855 bb094608405b8d6d53896f1a3ff6424a 326 SUPERFAMILY SSF53800 2 324 2.49E-103 T 13-10-2018 Atc_2855 bb094608405b8d6d53896f1a3ff6424a 326 Gene3D G3DSA:3.40.50.1400 2 322 4.4E-92 T 13-10-2018 Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 SUPERFAMILY SSF48557 6 460 6.75E-148 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 3.2E-31 T 13-10-2018 IPR000362 Fumarate lyase family Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 3.2E-31 T 13-10-2018 IPR000362 Fumarate lyase family Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 3.2E-31 T 13-10-2018 IPR000362 Fumarate lyase family Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 3.2E-31 T 13-10-2018 IPR000362 Fumarate lyase family Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 Gene3D G3DSA:1.10.275.10 6 139 2.5E-52 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 Gene3D G3DSA:1.10.40.30 407 467 3.6E-18 T 13-10-2018 Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 Pfam PF10415 Fumarase C C-terminus 409 461 1.3E-16 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 PRINTS PR00145 Argininosuccinate lyase family signature 176 196 6.3E-6 T 13-10-2018 Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 6.3E-6 T 13-10-2018 Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 6.3E-6 T 13-10-2018 Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 Pfam PF00206 Lyase 15 343 8.1E-103 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 6 461 1.9E-204 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 463 81.808 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atc_0409 e4a8f06adef08b7ec2d59820d87039f5 485 Gene3D G3DSA:1.20.200.10 140 406 7.3E-112 T 13-10-2018 Atc_0275 3f18e9ab657535f6a9a88361086a459e 771 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 19 696 6.0E-152 T 13-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 Atc_0275 3f18e9ab657535f6a9a88361086a459e 771 Pfam PF07664 Ferrous iron transport protein B C terminus 457 509 1.1E-18 T 13-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Atc_0275 3f18e9ab657535f6a9a88361086a459e 771 Gene3D G3DSA:3.40.50.300 12 191 1.5E-41 T 13-10-2018 Atc_0275 3f18e9ab657535f6a9a88361086a459e 771 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 36 54 8.1E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_0275 3f18e9ab657535f6a9a88361086a459e 771 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 63 78 8.1E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_0275 3f18e9ab657535f6a9a88361086a459e 771 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 15 35 8.1E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_0275 3f18e9ab657535f6a9a88361086a459e 771 Pfam PF02421 Ferrous iron transport protein B 14 169 1.7E-50 T 13-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Atc_0275 3f18e9ab657535f6a9a88361086a459e 771 SUPERFAMILY SSF52540 12 184 1.17E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0275 3f18e9ab657535f6a9a88361086a459e 771 Pfam PF07670 Nucleoside recognition 353 445 1.5E-12 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Atc_0275 3f18e9ab657535f6a9a88361086a459e 771 Pfam PF07670 Nucleoside recognition 515 699 2.1E-20 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Atc_1063 1ba8a4de5cd843431ead9aaf67be6959 126 Pfam PF05717 IS66 Orf2 like protein 10 107 5.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 Atc_1574 1ba8a4de5cd843431ead9aaf67be6959 126 Pfam PF05717 IS66 Orf2 like protein 10 107 5.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 Atc_1618 1ba8a4de5cd843431ead9aaf67be6959 126 Pfam PF05717 IS66 Orf2 like protein 10 107 5.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 Atc_0215 1ba8a4de5cd843431ead9aaf67be6959 126 Pfam PF05717 IS66 Orf2 like protein 10 107 5.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 Atc_1632 1ba8a4de5cd843431ead9aaf67be6959 126 Pfam PF05717 IS66 Orf2 like protein 10 107 5.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 Atc_1802 1ba8a4de5cd843431ead9aaf67be6959 126 Pfam PF05717 IS66 Orf2 like protein 10 107 5.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 Atc_0502 2f610d96356e1cf5c2ed565256970f36 95 Gene3D G3DSA:3.30.420.10 17 95 1.7E-7 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_0502 2f610d96356e1cf5c2ed565256970f36 95 Pfam PF00665 Integrase core domain 20 95 1.2E-15 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_0502 2f610d96356e1cf5c2ed565256970f36 95 SUPERFAMILY SSF53098 14 95 7.59E-19 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Gene3D G3DSA:1.10.1030.10 403 552 1.8E-50 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 SUPERFAMILY SSF52440 556 674 4.75E-49 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 1048 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 SUPERFAMILY SSF56059 128 400 1.7E-109 T 13-10-2018 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 SUPERFAMILY SSF52440 2 127 4.17E-48 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 SUPERFAMILY SSF56059 672 932 2.12E-101 T 13-10-2018 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 7.5E-75 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 672 873 7.6E-36 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 SUPERFAMILY SSF48108 395 553 2.48E-52 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Gene3D G3DSA:3.30.470.20 664 934 5.2E-116 T 13-10-2018 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1061 13.166 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Gene3D G3DSA:3.40.50.20 1 116 1.1E-48 T 13-10-2018 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.616 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Gene3D G3DSA:3.40.50.1380 936 1070 2.1E-36 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 SMART SM00851 954 1040 9.9E-31 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.8E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.8E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 2.8E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.8E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.8E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.8E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.8E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 837 844 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Gene3D G3DSA:3.30.470.20 119 402 2.4E-130 T 13-10-2018 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Gene3D G3DSA:3.40.50.20 553 661 4.3E-49 T 13-10-2018 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Pfam PF02142 MGS-like domain 957 1040 9.3E-20 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 SMART SM01096 423 546 1.2E-75 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 SUPERFAMILY SSF52335 934 1068 3.53E-37 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 708 722 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atc_0656 3bbf6fc862ee0e10144f4ac10b21785d 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 426 546 4.4E-40 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_2189 686e7ed20b6da13c2109f196c4cf7435 488 PIRSF PIRSF006446 4 465 4.6E-127 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_2189 686e7ed20b6da13c2109f196c4cf7435 488 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 11 446 1.2E-135 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_2297 581df6e851dae87341429bd5caaa4b8a 248 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 156 4.0E-17 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Atc_2297 581df6e851dae87341429bd5caaa4b8a 248 Gene3D G3DSA:1.20.1440.120 85 245 4.1E-27 T 13-10-2018 Atc_2297 581df6e851dae87341429bd5caaa4b8a 248 Gene3D G3DSA:2.40.50.140 3 77 2.3E-21 T 13-10-2018 Atc_2297 581df6e851dae87341429bd5caaa4b8a 248 Pfam PF11967 Recombination protein O N terminal 6 77 1.1E-13 T 13-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Atc_2297 581df6e851dae87341429bd5caaa4b8a 248 SUPERFAMILY SSF50249 6 76 2.57E-9 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_2297 581df6e851dae87341429bd5caaa4b8a 248 Hamap MF_00201 DNA repair protein RecO [recO]. 3 236 18.329 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Atc_2297 581df6e851dae87341429bd5caaa4b8a 248 SUPERFAMILY SSF57863 91 193 1.49E-13 T 13-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Atc_2297 581df6e851dae87341429bd5caaa4b8a 248 Pfam PF02565 Recombination protein O C terminal 89 231 2.0E-20 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Atc_2854 a2779abcdcdfa136927cb361aed5c0dc 258 Gene3D G3DSA:3.60.10.10 1 255 6.3E-75 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atc_2854 a2779abcdcdfa136927cb361aed5c0dc 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 254 5.4E-74 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Atc_2854 a2779abcdcdfa136927cb361aed5c0dc 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 247 1.2E-22 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Atc_2854 a2779abcdcdfa136927cb361aed5c0dc 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 252 2.2E-75 T 13-10-2018 Atc_2854 a2779abcdcdfa136927cb361aed5c0dc 258 SUPERFAMILY SSF56219 3 254 9.55E-76 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atc_2854 a2779abcdcdfa136927cb361aed5c0dc 258 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 13-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Atc_2854 a2779abcdcdfa136927cb361aed5c0dc 258 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 13-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 Atc_m068 7af3cc687a4bba17e40bda1548b87d6a 203 Gene3D G3DSA:3.40.50.1820 1 201 4.3E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_m068 7af3cc687a4bba17e40bda1548b87d6a 203 Pfam PF00326 Prolyl oligopeptidase family 39 202 4.8E-13 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Atc_m068 7af3cc687a4bba17e40bda1548b87d6a 203 SUPERFAMILY SSF53474 2 202 2.01E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_0423 eb0b02ad6456f7195723b80269accd22 233 Pfam PF01728 FtsJ-like methyltransferase 54 228 6.5E-50 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Atc_0423 eb0b02ad6456f7195723b80269accd22 233 SUPERFAMILY SSF53335 53 230 2.99E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0423 eb0b02ad6456f7195723b80269accd22 233 Gene3D G3DSA:3.40.50.150 50 232 1.0E-55 T 13-10-2018 Atc_0423 eb0b02ad6456f7195723b80269accd22 233 PIRSF PIRSF005461 24 233 4.2E-71 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Atc_0423 eb0b02ad6456f7195723b80269accd22 233 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 38 230 29.323 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 Gene3D G3DSA:3.20.20.10 40 280 1.0E-145 T 13-10-2018 IPR029066 PLP-binding barrel Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 43 284 1.1E-66 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 36 375 1.1E-25 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 Gene3D G3DSA:2.40.37.10 20 414 1.0E-145 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 303 321 2.3E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 80 97 2.3E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 169 178 2.3E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 385 407 2.3E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 275 294 8.1E-22 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 82 94 8.1E-22 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 62 80 8.1E-22 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 195 208 8.1E-22 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 375 388 8.1E-22 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 62 80 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 SUPERFAMILY SSF50621 258 417 6.49E-52 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 230 246 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 21 418 40.877 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 16 417 6.3E-153 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2704 37555f8d0e675c0cf09f6e8dcd99ca66 421 SUPERFAMILY SSF51419 33 287 2.18E-75 T 13-10-2018 IPR029066 PLP-binding barrel Atc_1779 5ffee859ef84f7faf6b1919046127617 391 Pfam PF13286 Phosphohydrolase-associated domain 291 380 5.9E-29 T 13-10-2018 IPR026875 Phosphohydrolase-associated domain Atc_1779 5ffee859ef84f7faf6b1919046127617 391 SUPERFAMILY SSF109604 25 385 1.66E-90 T 13-10-2018 Atc_1779 5ffee859ef84f7faf6b1919046127617 391 SMART SM00471 68 212 1.9E-10 T 13-10-2018 IPR003607 HD/PDEase domain Atc_1779 5ffee859ef84f7faf6b1919046127617 391 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 11 382 38.97 T 13-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 Atc_1779 5ffee859ef84f7faf6b1919046127617 391 Gene3D G3DSA:1.10.3210.10 7 383 4.0E-133 T 13-10-2018 Atc_1779 5ffee859ef84f7faf6b1919046127617 391 Pfam PF01966 HD domain 72 202 3.2E-15 T 13-10-2018 IPR006674 HD domain Atc_1779 5ffee859ef84f7faf6b1919046127617 391 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 35 382 6.6E-94 T 13-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Atc_2663 94439d700f9d55d5166e923501384c49 317 SUPERFAMILY SSF56059 99 310 4.38E-49 T 13-10-2018 Atc_2663 94439d700f9d55d5166e923501384c49 317 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 253 281 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2663 94439d700f9d55d5166e923501384c49 317 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 310 6.3E-93 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2663 94439d700f9d55d5166e923501384c49 317 Gene3D G3DSA:3.40.50.20 1 87 1.9E-24 T 13-10-2018 Atc_2663 94439d700f9d55d5166e923501384c49 317 Gene3D G3DSA:3.30.1490.20 114 188 2.5E-71 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atc_2663 94439d700f9d55d5166e923501384c49 317 SUPERFAMILY SSF52440 6 99 1.06E-26 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atc_2663 94439d700f9d55d5166e923501384c49 317 Gene3D G3DSA:3.30.470.20 88 307 2.5E-71 T 13-10-2018 Atc_2663 94439d700f9d55d5166e923501384c49 317 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 311 33.374 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2663 94439d700f9d55d5166e923501384c49 317 Pfam PF07478 D-ala D-ala ligase C-terminus 106 307 7.8E-52 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2663 94439d700f9d55d5166e923501384c49 317 Pfam PF01820 D-ala D-ala ligase N-terminus 6 89 2.6E-19 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2663 94439d700f9d55d5166e923501384c49 317 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2663 94439d700f9d55d5166e923501384c49 317 PIRSF PIRSF039102 3 52 9.9E-7 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2663 94439d700f9d55d5166e923501384c49 317 PIRSF PIRSF039102 45 316 8.4E-81 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2472 44fed1f9f741d2521cd5041b8516741f 346 SUPERFAMILY SSF54106 46 88 7.19E-5 T 13-10-2018 Atc_2472 44fed1f9f741d2521cd5041b8516741f 346 Pfam PF03734 L,D-transpeptidase catalytic domain 101 231 1.2E-18 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atc_2472 44fed1f9f741d2521cd5041b8516741f 346 SUPERFAMILY SSF141523 100 231 6.15E-28 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_2472 44fed1f9f741d2521cd5041b8516741f 346 Gene3D G3DSA:2.40.440.10 24 306 3.1E-87 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_1648 50eb854a4c447bda34820e2c0af60df6 664 SUPERFAMILY SSF116726 580 649 1.57E-12 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atc_1648 50eb854a4c447bda34820e2c0af60df6 664 Gene3D G3DSA:3.40.50.720 404 564 2.7E-37 T 13-10-2018 Atc_1648 50eb854a4c447bda34820e2c0af60df6 664 Gene3D G3DSA:1.20.1530.20 3 383 2.1E-81 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Atc_1648 50eb854a4c447bda34820e2c0af60df6 664 Pfam PF00999 Sodium/hydrogen exchanger family 9 373 6.1E-62 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Atc_1648 50eb854a4c447bda34820e2c0af60df6 664 Pfam PF02254 TrkA-N domain 408 521 1.9E-25 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Atc_1648 50eb854a4c447bda34820e2c0af60df6 664 SUPERFAMILY SSF51735 404 547 5.49E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1648 50eb854a4c447bda34820e2c0af60df6 664 Pfam PF02080 TrkA-C domain 583 649 1.4E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Atc_1648 50eb854a4c447bda34820e2c0af60df6 664 Gene3D G3DSA:3.30.70.1450 579 651 2.6E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atc_0583 88dde7194e49e45003471f715587f383 377 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 10 201 6.3E-83 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_0583 88dde7194e49e45003471f715587f383 377 SUPERFAMILY SSF142695 208 369 7.85E-34 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Atc_0583 88dde7194e49e45003471f715587f383 377 PIRSF PIRSF001259 4 377 1.5E-112 T 13-10-2018 Atc_0583 88dde7194e49e45003471f715587f383 377 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 8 202 2.3E-71 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_0583 88dde7194e49e45003471f715587f383 377 SUPERFAMILY SSF55821 5 205 2.52E-85 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Atc_0583 88dde7194e49e45003471f715587f383 377 Pfam PF00925 GTP cyclohydrolase II 217 367 4.6E-25 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Atc_0583 88dde7194e49e45003471f715587f383 377 Gene3D G3DSA:3.90.870.10 1 209 2.6E-87 T 13-10-2018 Atc_0583 88dde7194e49e45003471f715587f383 377 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 4 206 37.67 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_0075 1aca4ae3e94cbdc50f00eac5b2e6d5d1 356 Gene3D G3DSA:3.20.20.70 1 354 2.5E-155 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0075 1aca4ae3e94cbdc50f00eac5b2e6d5d1 356 SUPERFAMILY SSF51569 1 328 2.05E-108 T 13-10-2018 Atc_0075 1aca4ae3e94cbdc50f00eac5b2e6d5d1 356 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 327 1.5E-96 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Atc_0075 1aca4ae3e94cbdc50f00eac5b2e6d5d1 356 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Atc_0075 1aca4ae3e94cbdc50f00eac5b2e6d5d1 356 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Atc_0075 1aca4ae3e94cbdc50f00eac5b2e6d5d1 356 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 2.7E-199 T 13-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Atc_0075 1aca4ae3e94cbdc50f00eac5b2e6d5d1 356 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 328 1.2E-100 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Atc_0075 1aca4ae3e94cbdc50f00eac5b2e6d5d1 356 PIRSF PIRSF001359 1 329 1.4E-85 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Atc_2155 973a9220f122d95562dcf73dd6de88de 264 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 9 263 36.916 T 13-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Atc_2155 973a9220f122d95562dcf73dd6de88de 264 Pfam PF02649 Type I GTP cyclohydrolase folE2 9 258 8.7E-93 T 13-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Atc_2155 973a9220f122d95562dcf73dd6de88de 264 Gene3D G3DSA:3.10.270.10 6 263 7.4E-95 T 13-10-2018 Atc_2155 973a9220f122d95562dcf73dd6de88de 264 TIGRFAM TIGR00294 TIGR00294: GTP cyclohydrolase 152 259 2.3E-29 T 13-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 Gene3D G3DSA:3.50.50.60 7 324 5.2E-110 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 320 4.5E-65 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 SUPERFAMILY SSF51905 5 363 1.4E-55 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 6 453 2.0E-176 T 13-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 1.1E-29 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.1E-29 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 1.1E-29 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 1.1E-29 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 1.1E-29 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PIRSF PIRSF000350 1 450 2.5E-83 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 1.1E-67 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 1.1E-67 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.1E-67 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.1E-67 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 1.1E-67 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 1.1E-67 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 358 1.1E-67 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 427 447 1.1E-67 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 1.1E-67 T 13-10-2018 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 Gene3D G3DSA:3.50.50.60 146 263 5.2E-110 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 SUPERFAMILY SSF55424 340 453 4.64E-30 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 452 1.4E-29 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Atc_2489 bcf9494650fbdbd7173bd54a6242fdbb 453 Gene3D G3DSA:3.30.390.30 341 453 8.3E-43 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_0354 04417bcd81fa6fec21bfc38799c207aa 358 Gene3D G3DSA:3.40.640.10 54 267 8.7E-109 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_0354 04417bcd81fa6fec21bfc38799c207aa 358 Gene3D G3DSA:3.90.1150.10 18 353 8.7E-109 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_0354 04417bcd81fa6fec21bfc38799c207aa 358 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 12 358 53.563 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Atc_0354 04417bcd81fa6fec21bfc38799c207aa 358 Pfam PF00155 Aminotransferase class I and II 32 354 5.8E-41 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atc_0354 04417bcd81fa6fec21bfc38799c207aa 358 SUPERFAMILY SSF53383 18 358 3.13E-72 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_0354 04417bcd81fa6fec21bfc38799c207aa 358 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 15 356 2.7E-90 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Atc_2435 94281c5c418712992bbaa0ea2a9e170f 112 PIRSF PIRSF039144 1 112 5.1E-58 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_2435 94281c5c418712992bbaa0ea2a9e170f 112 SUPERFAMILY SSF54913 1 112 7.23E-48 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Atc_2435 94281c5c418712992bbaa0ea2a9e170f 112 PRINTS PR00340 P-II protein signature 52 75 7.7E-45 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_2435 94281c5c418712992bbaa0ea2a9e170f 112 PRINTS PR00340 P-II protein signature 2 17 7.7E-45 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_2435 94281c5c418712992bbaa0ea2a9e170f 112 PRINTS PR00340 P-II protein signature 83 103 7.7E-45 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_2435 94281c5c418712992bbaa0ea2a9e170f 112 PRINTS PR00340 P-II protein signature 23 41 7.7E-45 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_2435 94281c5c418712992bbaa0ea2a9e170f 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Atc_2435 94281c5c418712992bbaa0ea2a9e170f 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Atc_2435 94281c5c418712992bbaa0ea2a9e170f 112 Gene3D G3DSA:3.30.70.120 1 112 8.6E-50 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Atc_2435 94281c5c418712992bbaa0ea2a9e170f 112 SMART SM00938 4 105 4.3E-71 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_2435 94281c5c418712992bbaa0ea2a9e170f 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 5.3E-45 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_0660 240e44e36c5cd733682ebbe4d8ed6bbe 66 Pfam PF11127 Protein of unknown function (DUF2892) 1 61 2.7E-23 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 Gene3D G3DSA:1.10.3370.10 9 431 6.8E-165 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 ProSitePatterns PS00755 Protein secY signature 1. 77 96 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 PIRSF PIRSF004557 6 441 8.9E-124 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 11 435 30.27 T 13-10-2018 IPR026593 Protein translocase subunit SecY Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 430 3.5E-131 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 SUPERFAMILY SSF103491 11 426 3.92E-130 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 Pfam PF00344 SecY translocase 77 419 1.7E-118 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 2.7E-93 T 13-10-2018 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 117 140 2.7E-93 T 13-10-2018 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 2.7E-93 T 13-10-2018 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 404 422 2.7E-93 T 13-10-2018 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 317 339 2.7E-93 T 13-10-2018 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 24 42 2.7E-93 T 13-10-2018 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 372 390 2.7E-93 T 13-10-2018 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 2.7E-93 T 13-10-2018 Atc_0624 bbc86549dc658ca15ffa2ff33a861d48 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 76 96 2.7E-93 T 13-10-2018 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 SUPERFAMILY SSF47323 454 580 2.62E-37 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 SMART SM00836 460 580 2.3E-55 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 90 3.4E-23 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 SUPERFAMILY SSF52374 114 471 6.88E-87 T 13-10-2018 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 Gene3D G3DSA:1.10.730.10 455 580 2.0E-154 T 13-10-2018 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 SUPERFAMILY SSF55190 25 110 2.22E-23 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 134 1.5E-19 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 158 171 1.5E-19 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 329 350 1.5E-19 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 134 150 1.5E-19 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 Gene3D G3DSA:3.30.1360.70 2 110 3.0E-25 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 Gene3D G3DSA:3.40.50.620 120 454 2.0E-154 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 Pfam PF00750 tRNA synthetases class I (R) 294 426 1.4E-8 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 Pfam PF00750 tRNA synthetases class I (R) 113 178 3.3E-8 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 580 3.0E-131 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 Pfam PF05746 DALR anticodon binding domain 460 580 5.4E-37 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 SMART SM01016 3 90 4.9E-34 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 129 138 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2846 38ab8ba0156c0a9ddc4c3bed6d75808e 580 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 580 26.253 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atc_2511 41d03c67da812defb96ff97677fdd13e 437 Gene3D G3DSA:3.90.660.20 32 285 3.1E-23 T 13-10-2018 Atc_2511 41d03c67da812defb96ff97677fdd13e 437 Pfam PF01593 Flavin containing amine oxidoreductase 10 283 4.7E-16 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Atc_2511 41d03c67da812defb96ff97677fdd13e 437 Gene3D G3DSA:1.10.3110.10 101 194 3.1E-23 T 13-10-2018 Atc_2511 41d03c67da812defb96ff97677fdd13e 437 SUPERFAMILY SSF51905 1 411 1.12E-48 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2511 41d03c67da812defb96ff97677fdd13e 437 Gene3D G3DSA:3.50.50.60 4 282 3.1E-23 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2867 ae7f3c7caeeb467a794fc030f8bb7a15 135 Gene3D G3DSA:2.30.30.220 2 123 2.2E-42 T 13-10-2018 IPR036760 SspB-like superfamily Atc_2867 ae7f3c7caeeb467a794fc030f8bb7a15 135 PIRSF PIRSF005276 3 135 1.8E-41 T 13-10-2018 IPR007481 Stringent starvation protein B Atc_2867 ae7f3c7caeeb467a794fc030f8bb7a15 135 SUPERFAMILY SSF101738 5 113 4.71E-39 T 13-10-2018 IPR036760 SspB-like superfamily Atc_2867 ae7f3c7caeeb467a794fc030f8bb7a15 135 Pfam PF04386 Stringent starvation protein B 6 118 1.9E-29 T 13-10-2018 IPR007481 Stringent starvation protein B Atc_0607 b2f8b01614f694d09422c313df276bfc 97 SUPERFAMILY SSF54189 3 92 1.94E-30 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0607 b2f8b01614f694d09422c313df276bfc 97 Pfam PF00276 Ribosomal protein L23 9 94 6.6E-34 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Atc_0607 b2f8b01614f694d09422c313df276bfc 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 21.447 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Atc_0607 b2f8b01614f694d09422c313df276bfc 97 Gene3D G3DSA:3.30.70.330 1 96 1.0E-34 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Atc_0627 5a4ff28eb99fee3755daf4b8b089ffd2 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.368 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0627 5a4ff28eb99fee3755daf4b8b089ffd2 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-8 T 13-10-2018 Atc_0627 5a4ff28eb99fee3755daf4b8b089ffd2 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0627 5a4ff28eb99fee3755daf4b8b089ffd2 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 3.2E-22 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0627 5a4ff28eb99fee3755daf4b8b089ffd2 37 Pfam PF00444 Ribosomal protein L36 1 37 8.0E-19 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0627 5a4ff28eb99fee3755daf4b8b089ffd2 37 SUPERFAMILY SSF57840 1 37 9.68E-17 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 107 116 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 295 406 7.9E-30 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 SUPERFAMILY SSF55957 410 544 9.94E-40 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 Gene3D G3DSA:3.30.310.50 411 544 1.4E-41 T 13-10-2018 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 Gene3D G3DSA:3.40.120.10 190 291 4.3E-35 T 13-10-2018 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 SUPERFAMILY SSF53738 4 213 2.98E-48 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 SUPERFAMILY SSF53738 279 415 3.37E-36 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 SUPERFAMILY SSF53738 184 292 4.71E-28 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 152 1.7E-34 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 271 286 1.5E-22 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 106 120 1.5E-22 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 255 1.5E-22 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 206 225 1.5E-22 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 185 287 2.8E-11 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 Gene3D G3DSA:3.40.120.10 2 189 9.9E-79 T 13-10-2018 Atc_0564 b903ea8ff4669cffa9c9783387133772 544 Gene3D G3DSA:3.40.120.10 292 410 9.5E-46 T 13-10-2018 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 SUPERFAMILY SSF48163 331 482 6.93E-26 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 Gene3D G3DSA:1.10.10.350 396 489 1.1E-15 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 SUPERFAMILY SSF52374 23 323 1.02E-103 T 13-10-2018 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 22 336 7.2E-81 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 48 3.8E-20 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 PRINTS PR00987 Glutamyl-tRNA synthetase signature 52 65 3.8E-20 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 35 3.8E-20 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 PRINTS PR00987 Glutamyl-tRNA synthetase signature 225 233 3.8E-20 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 219 3.8E-20 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 26 37 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 22 480 1.8E-126 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 18 483 29.476 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atc_1428 432b2792ca37a233a305c9d2210102ab 490 Gene3D G3DSA:3.40.50.620 15 345 8.9E-124 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_1788 2e7d352e6eeca1de76ae07f63dc9e856 387 SMART SM00244 78 248 2.4E-13 T 13-10-2018 IPR001107 Band 7 domain Atc_1788 2e7d352e6eeca1de76ae07f63dc9e856 387 TIGRFAM TIGR01933 hflK: HflK protein 80 344 2.3E-57 T 13-10-2018 IPR010201 HflK GO:0016021 Atc_1788 2e7d352e6eeca1de76ae07f63dc9e856 387 Pfam PF01145 SPFH domain / Band 7 family 82 262 1.0E-22 T 13-10-2018 IPR001107 Band 7 domain Atc_1788 2e7d352e6eeca1de76ae07f63dc9e856 387 SUPERFAMILY SSF117892 139 253 2.88E-13 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily Atc_1788 2e7d352e6eeca1de76ae07f63dc9e856 387 Gene3D G3DSA:3.30.479.30 137 251 4.1E-12 T 13-10-2018 Atc_0472 e90cf2c2da0e9eceaabfcd0e1e5f2273 165 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 93 99 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_0472 e90cf2c2da0e9eceaabfcd0e1e5f2273 165 Gene3D G3DSA:3.40.50.150 1 164 1.6E-41 T 13-10-2018 Atc_0472 e90cf2c2da0e9eceaabfcd0e1e5f2273 165 SUPERFAMILY SSF53335 2 160 1.57E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0472 e90cf2c2da0e9eceaabfcd0e1e5f2273 165 Pfam PF03602 Conserved hypothetical protein 95 1 158 4.1E-36 T 13-10-2018 Atc_0472 e90cf2c2da0e9eceaabfcd0e1e5f2273 165 PIRSF PIRSF004553 1 162 2.7E-33 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Atc_1134 761ce77463596aaac7af0e9c85c395e6 211 Pfam PF10544 T5orf172 domain 4 85 6.0E-17 T 13-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding Atc_1134 761ce77463596aaac7af0e9c85c395e6 211 SMART SM00974 11 88 2.0E-24 T 13-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding Atc_1201 54942ec85d78b64dce60d5aac47e4f99 230 SUPERFAMILY SSF54427 87 228 3.11E-20 T 13-10-2018 IPR032710 NTF2-like domain superfamily Atc_1201 54942ec85d78b64dce60d5aac47e4f99 230 Gene3D G3DSA:3.10.450.230 86 229 7.7E-6 T 13-10-2018 Atc_1201 54942ec85d78b64dce60d5aac47e4f99 230 Pfam PF04335 VirB8 protein 18 228 2.2E-43 T 13-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 Atc_2029 a7eee8627dbdc0ae4158856719b697b1 787 SUPERFAMILY SSF52540 421 753 2.47E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2029 a7eee8627dbdc0ae4158856719b697b1 787 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 334 424 4.5E-7 T 13-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 Atc_2029 a7eee8627dbdc0ae4158856719b697b1 787 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 203 323 3.3E-5 T 13-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 Atc_1319 c3ce29d2d095710182aba1b2e5ae120b 133 Gene3D G3DSA:1.10.10.10 4 132 1.9E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1319 c3ce29d2d095710182aba1b2e5ae120b 133 SUPERFAMILY SSF46785 13 115 4.9E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1319 c3ce29d2d095710182aba1b2e5ae120b 133 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 30 89 6.8E-12 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_1474 1b24dbfc9ed1944654501fe1a131c516 1143 SUPERFAMILY SSF53448 328 477 1.13E-19 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_1474 1b24dbfc9ed1944654501fe1a131c516 1143 Gene3D G3DSA:3.40.50.2000 972 1114 2.8E-8 T 13-10-2018 Atc_1474 1b24dbfc9ed1944654501fe1a131c516 1143 SUPERFAMILY SSF53448 506 785 2.81E-51 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_1474 1b24dbfc9ed1944654501fe1a131c516 1143 Pfam PF00535 Glycosyl transferase family 2 527 709 5.7E-24 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atc_1474 1b24dbfc9ed1944654501fe1a131c516 1143 Gene3D G3DSA:3.90.550.10 514 759 1.8E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_1474 1b24dbfc9ed1944654501fe1a131c516 1143 Gene3D G3DSA:3.90.550.10 313 506 5.5E-22 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_1474 1b24dbfc9ed1944654501fe1a131c516 1143 Pfam PF05045 Rhamnan synthesis protein F 20 250 3.6E-23 T 13-10-2018 IPR007739 Rhamnan synthesis F Atc_1474 1b24dbfc9ed1944654501fe1a131c516 1143 SUPERFAMILY SSF53756 899 1138 6.17E-6 T 13-10-2018 Atc_1750 5f391d1166189ab68aca093d301ff069 493 SUPERFAMILY SSF56954 21 473 3.53E-72 T 13-10-2018 Atc_1750 5f391d1166189ab68aca093d301ff069 493 Pfam PF02321 Outer membrane efflux protein 45 266 1.1E-30 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1750 5f391d1166189ab68aca093d301ff069 493 Pfam PF02321 Outer membrane efflux protein 288 471 2.0E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1750 5f391d1166189ab68aca093d301ff069 493 Gene3D G3DSA:1.20.1600.10 37 475 6.3E-73 T 13-10-2018 Atc_1963 3fbeed35f2ca69a1d964204aa1f6b294 276 Gene3D G3DSA:2.40.440.10 34 252 2.3E-26 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_1963 3fbeed35f2ca69a1d964204aa1f6b294 276 Pfam PF03734 L,D-transpeptidase catalytic domain 67 225 1.4E-21 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atc_1963 3fbeed35f2ca69a1d964204aa1f6b294 276 SUPERFAMILY SSF141523 62 226 6.41E-21 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 SMART SM00322 550 615 3.8E-13 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 SUPERFAMILY SSF54211 289 486 2.99E-50 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 SUPERFAMILY SSF54791 540 634 8.85E-18 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 318 3.7E-15 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 SUPERFAMILY SSF55666 144 234 6.59E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 SUPERFAMILY SSF50249 607 690 3.77E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 9.8E-13 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Pfam PF03725 3' exoribonuclease family, domain 2 457 526 5.0E-8 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Gene3D G3DSA:3.30.230.70 1 229 5.7E-84 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 691 31.38 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 689 0.0 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 PIRSF PIRSF005499 1 692 3.8E-299 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Pfam PF00575 S1 RNA binding domain 617 688 1.7E-19 T 13-10-2018 IPR003029 S1 domain GO:0003676 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 SMART SM00316 618 688 1.9E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Pfam PF00013 KH domain 554 611 3.1E-9 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Gene3D G3DSA:3.30.1370.10 548 619 1.7E-19 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 SUPERFAMILY SSF55666 448 543 8.98E-30 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Pfam PF01138 3' exoribonuclease family, domain 1 322 454 4.7E-24 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 8.2E-22 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Gene3D G3DSA:2.40.50.140 620 692 2.0E-30 T 13-10-2018 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 Gene3D G3DSA:3.30.230.70 233 547 9.4E-116 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_2460 0c18f8f4fe067809720b955ae65f98a9 692 SUPERFAMILY SSF54211 3 143 3.34E-53 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_2643 edaeb9e296cc5f9484a5dc32e4f1df57 315 Gene3D G3DSA:3.90.79.10 1 111 4.2E-32 T 13-10-2018 Atc_2643 edaeb9e296cc5f9484a5dc32e4f1df57 315 SUPERFAMILY SSF51391 116 312 6.28E-36 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atc_2643 edaeb9e296cc5f9484a5dc32e4f1df57 315 Gene3D G3DSA:3.20.20.70 113 315 1.5E-40 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2643 edaeb9e296cc5f9484a5dc32e4f1df57 315 Pfam PF02581 Thiamine monophosphate synthase 119 295 7.4E-26 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atc_2643 edaeb9e296cc5f9484a5dc32e4f1df57 315 PRINTS PR00502 NUDIX hydrolase family signature 16 30 3.1E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atc_2643 edaeb9e296cc5f9484a5dc32e4f1df57 315 PRINTS PR00502 NUDIX hydrolase family signature 30 45 3.1E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atc_2643 edaeb9e296cc5f9484a5dc32e4f1df57 315 Pfam PF00293 NUDIX domain 6 105 3.8E-17 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atc_2643 edaeb9e296cc5f9484a5dc32e4f1df57 315 ProSitePatterns PS00893 Nudix box signature. 21 42 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atc_2643 edaeb9e296cc5f9484a5dc32e4f1df57 315 SUPERFAMILY SSF55811 1 109 1.26E-30 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atc_2681 5dcb345c1c24e13c23093e0f23f7355d 188 SUPERFAMILY SSF52540 8 179 1.38E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2681 5dcb345c1c24e13c23093e0f23f7355d 188 Gene3D G3DSA:3.40.50.300 2 185 8.2E-17 T 13-10-2018 Atc_2681 5dcb345c1c24e13c23093e0f23f7355d 188 Pfam PF00071 Ras family 9 131 2.9E-5 T 13-10-2018 IPR001806 Small GTPase GO:0003924|GO:0005525 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 4 302 78.039 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 5 300 1.4E-113 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 8.1E-28 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 8.1E-28 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 8.1E-28 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 8.1E-28 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 145 1.0E-53 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 Gene3D G3DSA:3.40.50.1370 135 297 2.0E-114 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 299 1.5E-46 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 Gene3D G3DSA:3.40.50.1370 5 134 2.0E-114 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 1.0E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 1.0E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 218 228 1.0E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 1.0E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 1.0E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atc_2452 c44e440784d767e539dc55d5f31df2d5 313 SUPERFAMILY SSF53671 3 302 4.06E-102 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atc_0048 cf097b5e792bdb1aa0186dd63591628e 497 Pfam PF11997 Domain of unknown function (DUF3492) 9 285 7.2E-73 T 13-10-2018 IPR022622 Domain of unknown function DUF3492 Atc_0048 cf097b5e792bdb1aa0186dd63591628e 497 SUPERFAMILY SSF53756 11 494 4.35E-59 T 13-10-2018 Atc_0048 cf097b5e792bdb1aa0186dd63591628e 497 Pfam PF00534 Glycosyl transferases group 1 308 469 2.2E-26 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Atc_0048 cf097b5e792bdb1aa0186dd63591628e 497 Gene3D G3DSA:3.40.50.2000 276 478 8.7E-43 T 13-10-2018 Atc_1923 0985094e3b9e7b097576d343e8413ef2 80 SUPERFAMILY SSF52833 2 79 5.89E-12 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1923 0985094e3b9e7b097576d343e8413ef2 80 Pfam PF13192 Thioredoxin domain 1 77 2.3E-12 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_1923 0985094e3b9e7b097576d343e8413ef2 80 Gene3D G3DSA:3.40.30.10 1 80 1.5E-13 T 13-10-2018 Atc_2265 5832eeeb1908cd53d1f9b526145f295b 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 5.1E-17 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2265 5832eeeb1908cd53d1f9b526145f295b 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 5.1E-17 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2265 5832eeeb1908cd53d1f9b526145f295b 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 5.1E-17 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2265 5832eeeb1908cd53d1f9b526145f295b 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 5.1E-17 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2265 5832eeeb1908cd53d1f9b526145f295b 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.174 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2265 5832eeeb1908cd53d1f9b526145f295b 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 13-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_2265 5832eeeb1908cd53d1f9b526145f295b 71 Pfam PF01165 Ribosomal protein S21 3 55 2.9E-23 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2265 5832eeeb1908cd53d1f9b526145f295b 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-20 T 13-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2265 5832eeeb1908cd53d1f9b526145f295b 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 14 44 6.0E-9 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2265 5832eeeb1908cd53d1f9b526145f295b 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.8E-25 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0866 7870ef31a66beccb5496c1f2efa92812 138 SUPERFAMILY SSF81901 43 125 7.06E-20 T 13-10-2018 Atc_0866 7870ef31a66beccb5496c1f2efa92812 138 Pfam PF08238 Sel1 repeat 88 123 3.1E-7 T 13-10-2018 IPR006597 Sel1-like repeat Atc_0866 7870ef31a66beccb5496c1f2efa92812 138 Pfam PF08238 Sel1 repeat 52 85 7.1E-9 T 13-10-2018 IPR006597 Sel1-like repeat Atc_0866 7870ef31a66beccb5496c1f2efa92812 138 Gene3D G3DSA:1.25.40.10 6 136 3.5E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0866 7870ef31a66beccb5496c1f2efa92812 138 SMART SM00671 52 87 1.1E-8 T 13-10-2018 IPR006597 Sel1-like repeat Atc_0866 7870ef31a66beccb5496c1f2efa92812 138 SMART SM00671 88 123 1.1E-8 T 13-10-2018 IPR006597 Sel1-like repeat Atc_1767 eaefd7aeb803464d2bd49ff3d56f7338 514 SMART SM00534 322 507 4.8E-57 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Atc_1767 eaefd7aeb803464d2bd49ff3d56f7338 514 SUPERFAMILY SSF52540 282 509 3.87E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1767 eaefd7aeb803464d2bd49ff3d56f7338 514 Gene3D G3DSA:3.40.50.300 283 513 1.7E-64 T 13-10-2018 Atc_1767 eaefd7aeb803464d2bd49ff3d56f7338 514 SUPERFAMILY SSF48334 21 274 7.19E-11 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Atc_1767 eaefd7aeb803464d2bd49ff3d56f7338 514 SMART SM00533 11 302 1.5E-4 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Atc_1767 eaefd7aeb803464d2bd49ff3d56f7338 514 Pfam PF00488 MutS domain V 326 509 1.7E-35 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Atc_1354 02e71676e4d0830f204d8c2ef2d97d8f 249 Gene3D G3DSA:3.30.1150.10 116 246 3.1E-20 T 13-10-2018 Atc_1354 02e71676e4d0830f204d8c2ef2d97d8f 249 SUPERFAMILY SSF74653 153 234 1.96E-14 T 13-10-2018 Atc_1354 02e71676e4d0830f204d8c2ef2d97d8f 249 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 170 241 3.8E-14 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Atc_1354 02e71676e4d0830f204d8c2ef2d97d8f 249 PRINTS PR01217 Proline rich extensin signature 64 85 2.1E-14 T 13-10-2018 Atc_1354 02e71676e4d0830f204d8c2ef2d97d8f 249 PRINTS PR01217 Proline rich extensin signature 85 101 2.1E-14 T 13-10-2018 Atc_1354 02e71676e4d0830f204d8c2ef2d97d8f 249 PRINTS PR01217 Proline rich extensin signature 102 119 2.1E-14 T 13-10-2018 Atc_1354 02e71676e4d0830f204d8c2ef2d97d8f 249 PRINTS PR01217 Proline rich extensin signature 120 145 2.1E-14 T 13-10-2018 Atc_1354 02e71676e4d0830f204d8c2ef2d97d8f 249 PRINTS PR01217 Proline rich extensin signature 43 55 2.1E-14 T 13-10-2018 Atc_1354 02e71676e4d0830f204d8c2ef2d97d8f 249 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 172 241 1.5E-12 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Atc_0287 9a19e5861de2fa88a5abe3e4782b9a2c 194 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 190 7.1E-73 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atc_0287 9a19e5861de2fa88a5abe3e4782b9a2c 194 Pfam PF02669 K+-transporting ATPase, c chain 6 188 7.2E-75 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atc_0287 9a19e5861de2fa88a5abe3e4782b9a2c 194 PIRSF PIRSF001296 1 194 8.2E-77 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atc_0287 9a19e5861de2fa88a5abe3e4782b9a2c 194 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 190 35.881 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.0E-60 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 SUPERFAMILY SSF52540 5 221 1.45E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.2E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.2E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.2E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.2E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.2E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 Gene3D G3DSA:3.40.50.300 1 205 9.0E-72 T 13-10-2018 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 SUPERFAMILY SSF50447 207 303 7.86E-31 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.3E-230 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.3E-34 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 4.3E-15 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 Gene3D G3DSA:2.40.30.10 340 395 1.5E-27 T 13-10-2018 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.542 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 SUPERFAMILY SSF50465 300 395 1.55E-36 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 Gene3D G3DSA:2.40.30.10 209 336 3.9E-55 T 13-10-2018 Atc_0603 d815b51dcb52b7b14bf433e77b40faef 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 9.7E-18 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.0E-60 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 SUPERFAMILY SSF52540 5 221 1.45E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.2E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.2E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.2E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.2E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.2E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 Gene3D G3DSA:3.40.50.300 1 205 9.0E-72 T 13-10-2018 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 SUPERFAMILY SSF50447 207 303 7.86E-31 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.3E-230 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.3E-34 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 4.3E-15 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 Gene3D G3DSA:2.40.30.10 340 395 1.5E-27 T 13-10-2018 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.542 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 SUPERFAMILY SSF50465 300 395 1.55E-36 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 Gene3D G3DSA:2.40.30.10 209 336 3.9E-55 T 13-10-2018 Atc_0590 d815b51dcb52b7b14bf433e77b40faef 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 9.7E-18 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atc_0926 e1417420f5e462c0a79a821aab2e1379 472 SUPERFAMILY SSF54966 4 140 5.1E-55 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0926 e1417420f5e462c0a79a821aab2e1379 472 Gene3D G3DSA:3.30.70.150 14 139 8.4E-48 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0926 e1417420f5e462c0a79a821aab2e1379 472 SUPERFAMILY SSF51649 141 465 3.53E-142 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0926 e1417420f5e462c0a79a821aab2e1379 472 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 146 454 5.8E-129 T 13-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0926 e1417420f5e462c0a79a821aab2e1379 472 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 1 467 59.708 T 13-10-2018 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0926 e1417420f5e462c0a79a821aab2e1379 472 Gene3D G3DSA:3.20.20.110 142 472 3.0E-154 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0926 e1417420f5e462c0a79a821aab2e1379 472 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 16 136 2.2E-43 T 13-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0926 e1417420f5e462c0a79a821aab2e1379 472 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 188 196 - T 13-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 SMART SM00474 295 481 2.2E-22 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 Gene3D G3DSA:3.40.50.1010 7 269 4.6E-86 T 13-10-2018 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 166 1.2E-47 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 Gene3D G3DSA:3.30.70.370 628 888 2.5E-113 T 13-10-2018 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 167 248 2.0E-25 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 Gene3D G3DSA:3.30.420.10 292 505 4.1E-60 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 SUPERFAMILY SSF88723 6 166 2.75E-48 T 13-10-2018 IPR029060 PIN-like domain superfamily Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 Pfam PF00476 DNA polymerase family A 515 889 4.5E-154 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 755 766 1.4E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 809 825 1.4E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 664 687 1.4E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 619 641 1.4E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 694 707 1.4E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 642 657 1.4E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 718 743 1.4E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 777 788 1.4E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 839 852 1.4E-79 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 SUPERFAMILY SSF47807 167 276 2.24E-28 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 SMART SM00475 5 254 6.7E-102 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 Pfam PF01612 3'-5' exonuclease 295 480 1.3E-28 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 SMART SM00482 650 856 9.6E-120 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 SMART SM00279 169 204 2.6E-13 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 SUPERFAMILY SSF53098 298 482 1.38E-41 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 TIGRFAM TIGR00593 pola: DNA polymerase I 7 892 2.8E-275 T 13-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 Gene3D G3DSA:1.20.1060.10 507 622 8.5E-42 T 13-10-2018 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 Gene3D G3DSA:1.10.150.20 170 242 4.6E-86 T 13-10-2018 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 SUPERFAMILY SSF56672 486 892 1.22E-157 T 13-10-2018 Atc_2712 9c857e3f024e42640a719ec5d4df37bd 894 Gene3D G3DSA:1.10.150.20 673 816 2.5E-113 T 13-10-2018 Atc_2307 b9f18761ac936b68dfa2d7a1518f5b13 321 Gene3D G3DSA:3.30.70.1630 13 181 9.4E-27 T 13-10-2018 Atc_2307 b9f18761ac936b68dfa2d7a1518f5b13 321 PIRSF PIRSF006487 8 311 8.3E-9 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Atc_2307 b9f18761ac936b68dfa2d7a1518f5b13 321 SUPERFAMILY SSF103025 13 232 4.55E-55 T 13-10-2018 Atc_2307 b9f18761ac936b68dfa2d7a1518f5b13 321 Pfam PF01571 Aminomethyltransferase folate-binding domain 14 123 4.9E-11 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Atc_2307 b9f18761ac936b68dfa2d7a1518f5b13 321 SUPERFAMILY SSF101790 242 312 2.29E-5 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Atc_2307 b9f18761ac936b68dfa2d7a1518f5b13 321 Gene3D G3DSA:3.30.70.1400 14 101 9.4E-27 T 13-10-2018 Atc_2307 b9f18761ac936b68dfa2d7a1518f5b13 321 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 178 242 2.0E-25 T 13-10-2018 IPR017703 YgfZ/GcvT conserved site Atc_2307 b9f18761ac936b68dfa2d7a1518f5b13 321 Gene3D G3DSA:2.40.30.160 187 302 5.6E-30 T 13-10-2018 Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 SMART SM00267 139 316 1.8E-57 T 13-10-2018 IPR000160 GGDEF domain Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 Gene3D G3DSA:3.30.450.20 25 140 3.4E-18 T 13-10-2018 Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 Gene3D G3DSA:3.20.20.450 327 578 9.9E-70 T 13-10-2018 IPR035919 EAL domain superfamily Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 Pfam PF13426 PAS domain 42 138 1.9E-10 T 13-10-2018 IPR000014 PAS domain Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 SUPERFAMILY SSF141868 329 574 1.18E-63 T 13-10-2018 IPR035919 EAL domain superfamily Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 43 145 8.6E-10 T 13-10-2018 IPR000014 PAS domain Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 Gene3D G3DSA:3.30.70.270 141 316 1.0E-52 T 13-10-2018 Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 SMART SM00052 322 565 5.8E-57 T 13-10-2018 IPR001633 EAL domain Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 SUPERFAMILY SSF55073 155 312 3.37E-42 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 SUPERFAMILY SSF55785 42 140 1.31E-12 T 13-10-2018 IPR035965 PAS domain superfamily Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 Pfam PF00563 EAL domain 329 560 1.8E-54 T 13-10-2018 IPR001633 EAL domain Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 310 4.4E-42 T 13-10-2018 IPR000160 GGDEF domain Atc_0192 da549061dffd0884733c6e4d8fe682d2 681 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 312 6.6E-42 T 13-10-2018 IPR000160 GGDEF domain Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 Gene3D G3DSA:3.40.630.10 183 497 5.3E-132 T 13-10-2018 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 SUPERFAMILY SSF52949 2 176 2.06E-32 T 13-10-2018 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 145 1.1E-22 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 1.3E-49 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 1.3E-49 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 1.3E-49 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 1.3E-49 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 1.3E-49 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 36.227 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 Gene3D G3DSA:3.40.220.10 1 160 3.7E-41 T 13-10-2018 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 188 489 5.3E-122 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Atc_0724 bed726a553f42dd9096a008c2d5fb921 500 SUPERFAMILY SSF53187 183 495 1.22E-118 T 13-10-2018 Atc_2496 09c387c025d29bd702770f6894d5f211 224 SUPERFAMILY SSF102712 132 193 2.62E-5 T 13-10-2018 Atc_2496 09c387c025d29bd702770f6894d5f211 224 Gene3D G3DSA:3.40.140.10 101 222 1.0E-42 T 13-10-2018 Atc_2496 09c387c025d29bd702770f6894d5f211 224 SUPERFAMILY SSF47781 15 91 1.45E-9 T 13-10-2018 IPR010994 RuvA domain 2-like Atc_2496 09c387c025d29bd702770f6894d5f211 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Atc_2496 09c387c025d29bd702770f6894d5f211 224 Pfam PF04002 RadC-like JAB domain 104 220 7.1E-43 T 13-10-2018 IPR025657 RadC-like JAB domain Atc_2496 09c387c025d29bd702770f6894d5f211 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 222 1.5E-70 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 20 164 1.0E-38 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 Gene3D G3DSA:3.40.50.1370 152 307 4.5E-84 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 19 322 38.682 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 175 318 1.2E-21 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 66 73 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 7.5E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 152 163 7.5E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 273 282 7.5E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 285 308 7.5E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 Gene3D G3DSA:3.40.50.1370 20 318 4.5E-84 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 1.7E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 1.7E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 151 168 1.7E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 277 282 1.7E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 236 245 1.7E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 301 315 1.7E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 SUPERFAMILY SSF53671 19 321 4.19E-86 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atc_0266 474ec4e12451b4662e8144b2b9ded80d 327 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 20 319 1.6E-82 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_0317 0746459dc5a5bbfcb5bccb91fba77adc 250 Gene3D G3DSA:3.40.50.300 4 239 1.4E-62 T 13-10-2018 Atc_0317 0746459dc5a5bbfcb5bccb91fba77adc 250 SMART SM00382 35 223 8.0E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0317 0746459dc5a5bbfcb5bccb91fba77adc 250 Pfam PF00005 ABC transporter 26 174 7.1E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0317 0746459dc5a5bbfcb5bccb91fba77adc 250 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0317 0746459dc5a5bbfcb5bccb91fba77adc 250 SUPERFAMILY SSF52540 6 225 9.08E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2880 40f91d1ceff67d124d474f2ca40dbe38 219 SUPERFAMILY SSF51391 6 205 4.05E-59 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atc_2880 40f91d1ceff67d124d474f2ca40dbe38 219 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 9 203 3.6E-55 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atc_2880 40f91d1ceff67d124d474f2ca40dbe38 219 Gene3D G3DSA:3.20.20.70 2 208 6.4E-59 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2880 40f91d1ceff67d124d474f2ca40dbe38 219 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 208 24.962 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atc_2880 40f91d1ceff67d124d474f2ca40dbe38 219 Pfam PF02581 Thiamine monophosphate synthase 9 190 1.0E-53 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atc_0062 901bc4d070e6192e43ee51acf949799f 383 Gene3D G3DSA:2.40.420.20 291 357 1.6E-68 T 13-10-2018 Atc_0062 901bc4d070e6192e43ee51acf949799f 383 Gene3D G3DSA:2.40.50.100 60 203 1.6E-68 T 13-10-2018 Atc_0062 901bc4d070e6192e43ee51acf949799f 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 357 5.1E-64 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_0062 901bc4d070e6192e43ee51acf949799f 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 280 1.1E-9 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_0062 901bc4d070e6192e43ee51acf949799f 383 SUPERFAMILY SSF111369 51 285 1.31E-48 T 13-10-2018 Atc_0062 901bc4d070e6192e43ee51acf949799f 383 Gene3D G3DSA:1.10.287.470 95 168 1.6E-68 T 13-10-2018 Atc_0062 901bc4d070e6192e43ee51acf949799f 383 Gene3D G3DSA:2.40.30.170 49 290 1.6E-68 T 13-10-2018 Atc_0222 ba326caff27548d8d4acc0a4305dd49d 292 SUPERFAMILY SSF53448 7 256 1.44E-52 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0222 ba326caff27548d8d4acc0a4305dd49d 292 Gene3D G3DSA:3.90.550.10 4 233 1.3E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0222 ba326caff27548d8d4acc0a4305dd49d 292 Pfam PF00535 Glycosyl transferase family 2 16 184 5.5E-22 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atc_1p06 788d5715b3430793a26263aaf5ece333 285 Pfam PF13481 AAA domain 7 183 6.4E-40 T 13-10-2018 Atc_1p06 788d5715b3430793a26263aaf5ece333 285 Gene3D G3DSA:3.40.50.300 1 280 6.5E-76 T 13-10-2018 Atc_1p06 788d5715b3430793a26263aaf5ece333 285 SUPERFAMILY SSF52540 14 183 6.2E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 455 42.794 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 Gene3D G3DSA:1.20.200.10 109 447 1.2E-142 T 13-10-2018 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 1.3E-31 T 13-10-2018 IPR000362 Fumarate lyase family Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 1.3E-31 T 13-10-2018 IPR000362 Fumarate lyase family Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 1.3E-31 T 13-10-2018 IPR000362 Fumarate lyase family Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 1.3E-31 T 13-10-2018 IPR000362 Fumarate lyase family Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 SUPERFAMILY SSF48557 8 459 2.2E-148 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 Gene3D G3DSA:1.10.40.30 364 434 1.2E-142 T 13-10-2018 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 Pfam PF14698 Argininosuccinate lyase C-terminal 365 433 1.7E-25 T 13-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 TIGRFAM TIGR00838 argH: argininosuccinate lyase 5 457 3.8E-183 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 Gene3D G3DSA:1.10.275.50 1 108 1.8E-40 T 13-10-2018 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 Pfam PF00206 Lyase 8 302 6.3E-82 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 1.6E-58 T 13-10-2018 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 1.6E-58 T 13-10-2018 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 1.6E-58 T 13-10-2018 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 1.6E-58 T 13-10-2018 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 1.6E-58 T 13-10-2018 Atc_2706 2d55b78397c799e47d0e2cdc58f29d57 463 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 1.6E-58 T 13-10-2018 Atc_0962 fe48467b7d1c025940a01725c1b61f1c 185 Gene3D G3DSA:2.30.130.40 1 106 2.1E-26 T 13-10-2018 Atc_0962 fe48467b7d1c025940a01725c1b61f1c 185 SUPERFAMILY SSF88697 9 182 5.72E-35 T 13-10-2018 IPR015947 PUA-like superfamily Atc_0962 fe48467b7d1c025940a01725c1b61f1c 185 SMART SM00464 9 183 6.3E-6 T 13-10-2018 IPR003111 Lon, substrate-binding domain Atc_0962 fe48467b7d1c025940a01725c1b61f1c 185 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 112 5.6E-13 T 13-10-2018 IPR003111 Lon, substrate-binding domain Atc_2268 e8f6f3c6ae81aa1e7b3ca527771eeb24 241 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 13-10-2018 IPR018336 Ribonuclease PH, conserved site Atc_2268 e8f6f3c6ae81aa1e7b3ca527771eeb24 241 Hamap MF_00564 Ribonuclease PH [rph]. 12 238 44.822 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Atc_2268 e8f6f3c6ae81aa1e7b3ca527771eeb24 241 Pfam PF01138 3' exoribonuclease family, domain 1 12 141 1.1E-20 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_2268 e8f6f3c6ae81aa1e7b3ca527771eeb24 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 235 4.2E-114 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Atc_2268 e8f6f3c6ae81aa1e7b3ca527771eeb24 241 Gene3D G3DSA:3.30.230.70 11 238 2.3E-61 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_2268 e8f6f3c6ae81aa1e7b3ca527771eeb24 241 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 1.1E-9 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_2268 e8f6f3c6ae81aa1e7b3ca527771eeb24 241 SUPERFAMILY SSF54211 3 182 3.75E-43 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_2268 e8f6f3c6ae81aa1e7b3ca527771eeb24 241 SUPERFAMILY SSF55666 154 235 8.51E-24 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atc_1029 b4d4ac1e351624222f9f3cf1726b9f8d 1055 SUPERFAMILY SSF52540 504 655 1.94E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1029 b4d4ac1e351624222f9f3cf1726b9f8d 1055 SUPERFAMILY SSF55464 16 290 1.74E-56 T 13-10-2018 Atc_1029 b4d4ac1e351624222f9f3cf1726b9f8d 1055 Gene3D G3DSA:2.30.30.940 842 913 1.1E-16 T 13-10-2018 Atc_1029 b4d4ac1e351624222f9f3cf1726b9f8d 1055 SUPERFAMILY SSF52540 624 962 9.82E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1029 b4d4ac1e351624222f9f3cf1726b9f8d 1055 Pfam PF08751 TrwC relaxase 4 286 3.8E-69 T 13-10-2018 IPR014862 TrwC relaxase Atc_1029 b4d4ac1e351624222f9f3cf1726b9f8d 1055 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 18 290 3.0E-51 T 13-10-2018 IPR014059 Conjugative relaxase, N-terminal Atc_1029 b4d4ac1e351624222f9f3cf1726b9f8d 1055 Gene3D G3DSA:3.40.50.300 785 960 1.1E-16 T 13-10-2018 Atc_1029 b4d4ac1e351624222f9f3cf1726b9f8d 1055 SMART SM00382 523 870 2.6E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1029 b4d4ac1e351624222f9f3cf1726b9f8d 1055 Gene3D G3DSA:3.40.50.300 499 664 2.1E-28 T 13-10-2018 Atc_1029 b4d4ac1e351624222f9f3cf1726b9f8d 1055 Gene3D G3DSA:3.40.50.300 665 739 2.1E-28 T 13-10-2018 Atc_1029 b4d4ac1e351624222f9f3cf1726b9f8d 1055 Pfam PF13604 AAA domain 509 690 2.2E-40 T 13-10-2018 Atc_2823 c75b6719ab48c4800c21637e5312b000 117 SUPERFAMILY SSF81301 4 112 7.68E-37 T 13-10-2018 Atc_2823 c75b6719ab48c4800c21637e5312b000 117 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 4 106 24.282 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Atc_2823 c75b6719ab48c4800c21637e5312b000 117 Pfam PF02410 Ribosomal silencing factor during starvation 11 105 3.0E-26 T 13-10-2018 Atc_2823 c75b6719ab48c4800c21637e5312b000 117 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 105 6.9E-35 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Atc_2823 c75b6719ab48c4800c21637e5312b000 117 Gene3D G3DSA:3.30.460.10 3 116 2.1E-36 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 SUPERFAMILY SSF82693 562 660 1.36E-6 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 7.2E-35 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 7.2E-35 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 7.2E-35 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 7.2E-35 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 7.2E-35 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 7.2E-35 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 7.2E-35 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 Gene3D G3DSA:3.30.2090.10 719 807 9.8E-288 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 SUPERFAMILY SSF82866 803 1024 3.01E-56 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 SUPERFAMILY SSF82693 142 326 4.45E-19 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 Gene3D G3DSA:1.20.1640.10 511 1020 9.8E-288 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 SUPERFAMILY SSF82714 185 265 2.49E-14 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 Gene3D G3DSA:1.20.1640.10 17 510 9.8E-288 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 Gene3D G3DSA:3.30.70.1430 565 667 9.8E-288 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 Pfam PF00873 AcrB/AcrD/AcrF family 9 1022 1.3E-287 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 8 1021 5.6E-299 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 Gene3D G3DSA:3.30.70.1430 44 815 9.8E-288 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 SUPERFAMILY SSF82693 45 129 4.97E-20 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 Gene3D G3DSA:3.30.2090.10 181 272 9.8E-288 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 Gene3D G3DSA:3.30.70.1320 138 326 9.8E-288 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 Gene3D G3DSA:3.30.70.1440 668 865 9.8E-288 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 SUPERFAMILY SSF82866 292 504 1.03E-42 T 13-10-2018 Atc_0343 3ece99f67f5d8b43811445a0a1183434 1045 SUPERFAMILY SSF82714 720 801 1.09E-8 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0346 6e890465c6beb4265d677048b1568aa7 284 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 157 185 2.7E-43 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atc_0346 6e890465c6beb4265d677048b1568aa7 284 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 11 38 2.7E-43 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atc_0346 6e890465c6beb4265d677048b1568aa7 284 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 88 106 2.7E-43 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atc_0346 6e890465c6beb4265d677048b1568aa7 284 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 106 132 2.7E-43 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atc_0346 6e890465c6beb4265d677048b1568aa7 284 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 6 242 17.059 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atc_0346 6e890465c6beb4265d677048b1568aa7 284 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 229 5.6E-66 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atc_0346 6e890465c6beb4265d677048b1568aa7 284 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 224 2.9E-68 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 4 615 44.955 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 SUPERFAMILY SSF52518 3 375 1.25E-78 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 ProSitePatterns PS00802 Transketolase signature 2. 419 435 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 SUPERFAMILY SSF52518 311 499 7.5E-58 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 ProSitePatterns PS00801 Transketolase signature 1. 30 49 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 Pfam PF02779 Transketolase, pyrimidine binding domain 314 472 1.5E-36 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 Gene3D G3DSA:3.40.50.920 490 615 2.1E-38 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 276 8.4E-116 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 607 1.4E-257 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 SUPERFAMILY SSF52922 485 615 1.31E-29 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 SMART SM00861 313 477 2.9E-65 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 Pfam PF02780 Transketolase, C-terminal domain 490 606 4.3E-23 T 13-10-2018 IPR033248 Transketolase, C-terminal domain Atc_2156 7d1240f365f164ac9cb192347f67d14d 624 Gene3D G3DSA:3.40.50.970 311 482 2.2E-65 T 13-10-2018 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 Pfam PF13538 UvrD-like helicase C-terminal domain 653 699 4.9E-19 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain Atc_1121 7f549d94585399c6ba52b7a6433af315 727 SMART SM00278 194 213 26.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 SMART SM00278 130 149 3.3 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 13 725 27.825 T 13-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 Gene3D G3DSA:1.10.10.2220 193 291 1.8E-20 T 13-10-2018 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 SUPERFAMILY SSF52540 442 718 2.74E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1121 7f549d94585399c6ba52b7a6433af315 727 Pfam PF13604 AAA domain 333 511 3.9E-44 T 13-10-2018 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 SUPERFAMILY SSF47781 95 169 1.42E-10 T 13-10-2018 IPR010994 RuvA domain 2-like Atc_1121 7f549d94585399c6ba52b7a6433af315 727 Pfam PF14520 Helix-hairpin-helix domain 101 152 2.6E-7 T 13-10-2018 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 Pfam PF14490 Helix-hairpin-helix containing domain 153 241 6.0E-32 T 13-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain Atc_1121 7f549d94585399c6ba52b7a6433af315 727 Gene3D G3DSA:1.10.150.20 85 155 1.9E-10 T 13-10-2018 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 17 722 4.5E-217 T 13-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 Gene3D G3DSA:3.40.50.300 324 720 5.6E-152 T 13-10-2018 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 SUPERFAMILY SSF52540 192 491 8.55E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1121 7f549d94585399c6ba52b7a6433af315 727 SMART SM00382 346 551 2.1E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1121 7f549d94585399c6ba52b7a6433af315 727 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 104 115 - T 13-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 Gene3D G3DSA:3.40.50.300 491 716 5.6E-152 T 13-10-2018 Atc_1121 7f549d94585399c6ba52b7a6433af315 727 Gene3D G3DSA:2.30.30.940 582 653 5.6E-152 T 13-10-2018 Atc_1793 7ab38f4337310fbe6e3e0e3f1bb3e76d 346 Pfam PF13384 Homeodomain-like domain 28 76 1.3E-8 T 13-10-2018 Atc_1793 7ab38f4337310fbe6e3e0e3f1bb3e76d 346 Pfam PF13683 Integrase core domain 264 328 3.4E-16 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_1793 7ab38f4337310fbe6e3e0e3f1bb3e76d 346 Gene3D G3DSA:3.30.420.10 170 342 5.0E-16 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_1793 7ab38f4337310fbe6e3e0e3f1bb3e76d 346 SUPERFAMILY SSF46689 24 141 1.43E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_1793 7ab38f4337310fbe6e3e0e3f1bb3e76d 346 SUPERFAMILY SSF53098 180 339 4.68E-26 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1308 3a45050b3f25c76e68e6fb9b7f889cac 161 Gene3D G3DSA:3.10.580.10 2 160 4.4E-35 T 13-10-2018 Atc_1308 3a45050b3f25c76e68e6fb9b7f889cac 161 Pfam PF00571 CBS domain 15 66 2.0E-12 T 13-10-2018 IPR000644 CBS domain Atc_1308 3a45050b3f25c76e68e6fb9b7f889cac 161 Pfam PF00571 CBS domain 106 157 7.4E-13 T 13-10-2018 IPR000644 CBS domain Atc_1308 3a45050b3f25c76e68e6fb9b7f889cac 161 SMART SM00116 20 68 7.2E-8 T 13-10-2018 IPR000644 CBS domain Atc_1308 3a45050b3f25c76e68e6fb9b7f889cac 161 SMART SM00116 110 158 3.7E-9 T 13-10-2018 IPR000644 CBS domain Atc_1308 3a45050b3f25c76e68e6fb9b7f889cac 161 SUPERFAMILY SSF54631 11 157 1.14E-33 T 13-10-2018 Atc_1337 7d8079b7cf2a43d62ce9976f585547ed 239 Gene3D G3DSA:3.40.50.150 7 236 6.3E-75 T 13-10-2018 Atc_1337 7d8079b7cf2a43d62ce9976f585547ed 239 Pfam PF08241 Methyltransferase domain 53 153 1.5E-22 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atc_1337 7d8079b7cf2a43d62ce9976f585547ed 239 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 7 236 38.154 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Atc_1337 7d8079b7cf2a43d62ce9976f585547ed 239 SUPERFAMILY SSF53335 10 230 9.53E-48 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1337 7d8079b7cf2a43d62ce9976f585547ed 239 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 7 230 1.3E-85 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Atc_1009 628f1f9de642b6107147a3b562a3d92e 234 Gene3D G3DSA:3.40.50.300 25 159 3.5E-16 T 13-10-2018 Atc_1009 628f1f9de642b6107147a3b562a3d92e 234 SUPERFAMILY SSF52540 29 207 8.75E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1009 628f1f9de642b6107147a3b562a3d92e 234 Gene3D G3DSA:1.10.8.60 163 229 2.3E-5 T 13-10-2018 Atc_2664 2597691695ebf1e252fbcf5698bf2a6d 300 Pfam PF03799 Cell division protein FtsQ 158 272 4.0E-14 T 13-10-2018 IPR005548 Cell division protein FtsQ/DivIB Atc_2664 2597691695ebf1e252fbcf5698bf2a6d 300 Pfam PF08478 POTRA domain, FtsQ-type 85 152 2.3E-16 T 13-10-2018 IPR013685 POTRA domain, FtsQ-type Atc_2664 2597691695ebf1e252fbcf5698bf2a6d 300 Gene3D G3DSA:3.10.20.310 85 154 9.4E-16 T 13-10-2018 Atc_2664 2597691695ebf1e252fbcf5698bf2a6d 300 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 56 280 19.249 T 13-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 Atc_2664 2597691695ebf1e252fbcf5698bf2a6d 300 Gene3D G3DSA:3.40.50.11690 156 282 6.3E-25 T 13-10-2018 Atc_0933 ed62111d44e0967de194d763a56b3e27 102 SUPERFAMILY SSF143414 1 86 3.66E-25 T 13-10-2018 IPR037233 CcmK-like superfamily Atc_0933 ed62111d44e0967de194d763a56b3e27 102 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 15 34 - T 13-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Atc_0933 ed62111d44e0967de194d763a56b3e27 102 Pfam PF00936 BMC domain 1 73 2.7E-22 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Atc_0933 ed62111d44e0967de194d763a56b3e27 102 SMART SM00877 1 74 1.3E-23 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Atc_0933 ed62111d44e0967de194d763a56b3e27 102 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 59 3.0E-18 T 13-10-2018 Atc_0933 ed62111d44e0967de194d763a56b3e27 102 Gene3D G3DSA:3.30.70.1710 1 99 8.2E-33 T 13-10-2018 Atc_1611 cbd8313190a77f6fd2241a9cd42eb848 109 Pfam PF02656 Domain of unknown function (DUF202) 26 81 2.3E-6 T 13-10-2018 IPR003807 Domain of unknown function DUF202 Atc_2625 5e8aea3aa75051b812cbe550c38e834b 223 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 203 26.157 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Atc_2625 5e8aea3aa75051b812cbe550c38e834b 223 Pfam PF13500 AAA domain 2 204 8.2E-34 T 13-10-2018 Atc_2625 5e8aea3aa75051b812cbe550c38e834b 223 PIRSF PIRSF006755 1 221 3.3E-55 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Atc_2625 5e8aea3aa75051b812cbe550c38e834b 223 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 170 3.7E-41 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Atc_2625 5e8aea3aa75051b812cbe550c38e834b 223 Gene3D G3DSA:3.40.50.300 1 175 1.2E-53 T 13-10-2018 Atc_2625 5e8aea3aa75051b812cbe550c38e834b 223 SUPERFAMILY SSF52540 1 212 2.48E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1071 ab3d2f545b53f2f048b9c2f19a639964 237 Pfam PF09836 Putative DNA-binding domain 6 97 3.8E-19 T 13-10-2018 IPR018640 Putative DNA-binding domain, bacteria Atc_2573 3afe1d42c6e02e22520751297697367c 763 SUPERFAMILY SSF54862 91 212 4.46E-27 T 13-10-2018 Atc_2573 3afe1d42c6e02e22520751297697367c 763 Gene3D G3DSA:2.20.25.90 224 277 1.8E-9 T 13-10-2018 Atc_2573 3afe1d42c6e02e22520751297697367c 763 SMART SM00926 224 278 5.2E-7 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2573 3afe1d42c6e02e22520751297697367c 763 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 225 276 9.4E-7 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2573 3afe1d42c6e02e22520751297697367c 763 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 94 127 5.1E-13 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2573 3afe1d42c6e02e22520751297697367c 763 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 153 163 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2573 3afe1d42c6e02e22520751297697367c 763 Gene3D G3DSA:3.10.20.740 3 128 1.8E-21 T 13-10-2018 Atc_2573 3afe1d42c6e02e22520751297697367c 763 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 34 51 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2573 3afe1d42c6e02e22520751297697367c 763 SUPERFAMILY SSF54292 4 127 1.83E-19 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atc_2573 3afe1d42c6e02e22520751297697367c 763 SMART SM00929 91 131 1.4E-10 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2573 3afe1d42c6e02e22520751297697367c 763 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 82 1.2E-9 T 13-10-2018 Atc_2573 3afe1d42c6e02e22520751297697367c 763 Pfam PF00384 Molybdopterin oxidoreductase 527 582 2.3E-6 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2573 3afe1d42c6e02e22520751297697367c 763 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 106 118 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2573 3afe1d42c6e02e22520751297697367c 763 SUPERFAMILY SSF53706 222 581 2.13E-42 T 13-10-2018 Atc_2573 3afe1d42c6e02e22520751297697367c 763 Gene3D G3DSA:3.40.50.740 477 584 2.4E-8 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Gene3D G3DSA:3.30.559.10 306 529 2.6E-54 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 575 585 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Pfam PF00364 Biotin-requiring enzyme 7 77 2.1E-13 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Pfam PF00364 Biotin-requiring enzyme 133 202 7.2E-12 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 541 866 3.2E-66 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 574 589 1.5E-48 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 673 682 1.5E-48 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 946 961 1.5E-48 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 541 563 1.5E-48 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 846 853 1.5E-48 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 713 738 1.5E-48 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 881 902 1.5E-48 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 803 817 1.5E-48 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 968 988 1.5E-48 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 SUPERFAMILY SSF51905 537 876 2.92E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Gene3D G3DSA:4.10.320.10 266 305 4.3E-8 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 SUPERFAMILY SSF51230 130 219 3.93E-21 T 13-10-2018 IPR011053 Single hybrid motif Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 888 993 3.8E-27 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Gene3D G3DSA:3.50.50.60 688 816 4.9E-98 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 SUPERFAMILY SSF47005 264 305 2.35E-6 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Gene3D G3DSA:2.40.50.100 2 104 1.6E-23 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Gene3D G3DSA:2.40.50.100 126 226 3.4E-22 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 831 853 7.8E-28 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 542 561 7.8E-28 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 713 731 7.8E-28 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 802 818 7.8E-28 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 670 688 7.8E-28 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Gene3D G3DSA:3.50.50.60 542 872 4.9E-98 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Gene3D G3DSA:3.30.390.30 886 1001 3.4E-33 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 155 184 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 SUPERFAMILY SSF55424 888 1001 4.12E-31 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 324 526 5.2E-49 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 SUPERFAMILY SSF51230 4 93 9.42E-22 T 13-10-2018 IPR011053 Single hybrid motif Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 SUPERFAMILY SSF52777 324 526 3.6E-52 T 13-10-2018 Atc_0278 b49a59c323345e3719a72c9a4b0a71d6 1009 Pfam PF02817 e3 binding domain 269 302 8.4E-8 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Atc_0639 dfa587fbfacd86b6d0751256fe746a9d 407 Gene3D G3DSA:1.10.3090.10 124 393 1.2E-30 T 13-10-2018 Atc_0639 dfa587fbfacd86b6d0751256fe746a9d 407 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 210 1.6E-11 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Atc_0639 dfa587fbfacd86b6d0751256fe746a9d 407 SUPERFAMILY SSF81301 2 121 9.81E-27 T 13-10-2018 Atc_0639 dfa587fbfacd86b6d0751256fe746a9d 407 Gene3D G3DSA:3.30.460.10 1 123 4.7E-26 T 13-10-2018 Atc_0639 dfa587fbfacd86b6d0751256fe746a9d 407 SUPERFAMILY SSF81891 122 306 6.54E-36 T 13-10-2018 Atc_0639 dfa587fbfacd86b6d0751256fe746a9d 407 Pfam PF01743 Poly A polymerase head domain 4 124 2.9E-18 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Atc_1521 5e2cb71b86bdc99e28d14fcf4e99b43f 120 Pfam PF04343 Protein of unknown function, DUF488 10 114 4.3E-27 T 13-10-2018 IPR007438 Protein of unknown function DUF488 Atc_1689 1e719fc6331241815da445f8952b693e 261 SMART SM00849 26 184 5.3E-6 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_1689 1e719fc6331241815da445f8952b693e 261 Gene3D G3DSA:3.60.15.10 4 243 3.4E-29 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_1689 1e719fc6331241815da445f8952b693e 261 SUPERFAMILY SSF56281 14 242 6.63E-26 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_1689 1e719fc6331241815da445f8952b693e 261 Pfam PF00753 Metallo-beta-lactamase superfamily 24 223 1.5E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_m109 daf4a9639eb4555f580a057c81e45d87 158 Gene3D G3DSA:1.10.10.10 13 155 7.6E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_m109 daf4a9639eb4555f580a057c81e45d87 158 SMART SM00347 42 142 2.1E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atc_m109 daf4a9639eb4555f580a057c81e45d87 158 Pfam PF12802 MarR family 47 105 2.8E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atc_m109 daf4a9639eb4555f580a057c81e45d87 158 SUPERFAMILY SSF46785 24 150 2.35E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1808 daf4a9639eb4555f580a057c81e45d87 158 Gene3D G3DSA:1.10.10.10 13 155 7.6E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1808 daf4a9639eb4555f580a057c81e45d87 158 SMART SM00347 42 142 2.1E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atc_1808 daf4a9639eb4555f580a057c81e45d87 158 Pfam PF12802 MarR family 47 105 2.8E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atc_1808 daf4a9639eb4555f580a057c81e45d87 158 SUPERFAMILY SSF46785 24 150 2.35E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_2367 980b07db92c6572b997a8d8ee7398f65 110 Pfam PF08770 Sulphur oxidation protein SoxZ 15 105 5.2E-33 T 13-10-2018 IPR014880 Sulphur oxidation protein SoxZ Atc_2367 980b07db92c6572b997a8d8ee7398f65 110 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 11 106 1.1E-33 T 13-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ Atc_2367 980b07db92c6572b997a8d8ee7398f65 110 SUPERFAMILY SSF81296 5 108 1.54E-30 T 13-10-2018 IPR014756 Immunoglobulin E-set Atc_2367 980b07db92c6572b997a8d8ee7398f65 110 Gene3D G3DSA:2.60.40.10 3 110 3.6E-36 T 13-10-2018 IPR013783 Immunoglobulin-like fold Atc_1682 40fcff9182a3482795b08f1bf2b0ad29 186 Pfam PF04542 Sigma-70 region 2 34 93 8.2E-11 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atc_1682 40fcff9182a3482795b08f1bf2b0ad29 186 Pfam PF08281 Sigma-70, region 4 124 177 1.7E-10 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_1682 40fcff9182a3482795b08f1bf2b0ad29 186 SUPERFAMILY SSF88659 123 182 3.55E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_1682 40fcff9182a3482795b08f1bf2b0ad29 186 Gene3D G3DSA:1.10.10.10 101 183 9.3E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1682 40fcff9182a3482795b08f1bf2b0ad29 186 Gene3D G3DSA:1.10.1740.10 10 92 3.1E-22 T 13-10-2018 Atc_1682 40fcff9182a3482795b08f1bf2b0ad29 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 181 1.9E-17 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atc_1682 40fcff9182a3482795b08f1bf2b0ad29 186 SUPERFAMILY SSF88946 7 108 5.89E-19 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atc_1419 6173602e1eb006c5ebebd3321a38f904 418 Gene3D G3DSA:1.20.81.30 67 182 2.8E-29 T 13-10-2018 Atc_1419 6173602e1eb006c5ebebd3321a38f904 418 PRINTS PR00812 Bacterial general secretion pathway protein F signature 175 203 2.2E-16 T 13-10-2018 IPR003004 GspF/PilC family Atc_1419 6173602e1eb006c5ebebd3321a38f904 418 PRINTS PR00812 Bacterial general secretion pathway protein F signature 395 414 2.2E-16 T 13-10-2018 IPR003004 GspF/PilC family Atc_1419 6173602e1eb006c5ebebd3321a38f904 418 PRINTS PR00812 Bacterial general secretion pathway protein F signature 76 88 2.2E-16 T 13-10-2018 IPR003004 GspF/PilC family Atc_1419 6173602e1eb006c5ebebd3321a38f904 418 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 393 2.2E-16 T 13-10-2018 IPR003004 GspF/PilC family Atc_1419 6173602e1eb006c5ebebd3321a38f904 418 Pfam PF00482 Type II secretion system (T2SS), protein F 286 406 7.5E-26 T 13-10-2018 IPR018076 Type II secretion system F domain Atc_1419 6173602e1eb006c5ebebd3321a38f904 418 Pfam PF00482 Type II secretion system (T2SS), protein F 81 203 6.1E-32 T 13-10-2018 IPR018076 Type II secretion system F domain Atc_1419 6173602e1eb006c5ebebd3321a38f904 418 Gene3D G3DSA:1.20.81.30 267 378 2.0E-25 T 13-10-2018 Atc_m064 c180a3935c8736384ede51595a113ffb 356 Gene3D G3DSA:1.10.287.470 98 159 7.4E-8 T 13-10-2018 Atc_m064 c180a3935c8736384ede51595a113ffb 356 Gene3D G3DSA:2.40.30.170 197 267 7.4E-8 T 13-10-2018 Atc_m064 c180a3935c8736384ede51595a113ffb 356 Gene3D G3DSA:2.40.50.100 164 196 7.4E-8 T 13-10-2018 Atc_m064 c180a3935c8736384ede51595a113ffb 356 Gene3D G3DSA:2.40.420.20 268 334 7.4E-8 T 13-10-2018 Atc_0148 7ccccc2e1b547fcb4f5f004e948a5b16 248 SMART SM00448 5 123 8.6E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0148 7ccccc2e1b547fcb4f5f004e948a5b16 248 SUPERFAMILY SSF52172 3 182 1.39E-30 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0148 7ccccc2e1b547fcb4f5f004e948a5b16 248 Gene3D G3DSA:1.10.10.10 133 238 2.4E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0148 7ccccc2e1b547fcb4f5f004e948a5b16 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 3.1E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_0148 7ccccc2e1b547fcb4f5f004e948a5b16 248 Gene3D G3DSA:3.40.50.2300 1 132 5.7E-29 T 13-10-2018 Atc_0148 7ccccc2e1b547fcb4f5f004e948a5b16 248 Pfam PF00072 Response regulator receiver domain 7 123 9.6E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0148 7ccccc2e1b547fcb4f5f004e948a5b16 248 SMART SM00862 156 233 3.2E-14 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 298 306 3.9E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 208 227 3.9E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 132 142 3.9E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 233 242 3.9E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 245 256 3.9E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 Gene3D G3DSA:3.10.20.30 1 96 6.3E-27 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 SUPERFAMILY SSF52343 201 332 2.23E-40 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 SUPERFAMILY SSF63380 102 198 6.09E-26 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 Pfam PF00970 Oxidoreductase FAD-binding domain 106 197 8.5E-16 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 Gene3D G3DSA:3.40.50.80 200 333 1.7E-37 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 PRINTS PR00410 Phenol hydroxylase reductase family signature 298 306 1.1E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 1.1E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 1.1E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 1.1E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 1.1E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 1.1E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 Pfam PF00175 Oxidoreductase NAD-binding domain 209 308 7.5E-24 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 SUPERFAMILY SSF54292 1 89 1.7E-28 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 81 5.4E-15 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Atc_2619 6ca16cbe93abe83613351a2a4bcee0e3 336 Gene3D G3DSA:2.40.30.10 101 199 6.2E-25 T 13-10-2018 Atc_2782 3f285183d94f9b15e2f4f100cdc0580a 165 ProSitePatterns PS00460 Glutathione peroxidases active site. 27 42 - T 13-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 Atc_2782 3f285183d94f9b15e2f4f100cdc0580a 165 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 63 70 - T 13-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 Atc_2782 3f285183d94f9b15e2f4f100cdc0580a 165 PRINTS PR01011 Glutathione peroxidase family signature 125 134 1.5E-18 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Atc_2782 3f285183d94f9b15e2f4f100cdc0580a 165 PRINTS PR01011 Glutathione peroxidase family signature 60 76 1.5E-18 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Atc_2782 3f285183d94f9b15e2f4f100cdc0580a 165 PRINTS PR01011 Glutathione peroxidase family signature 25 42 1.5E-18 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Atc_2782 3f285183d94f9b15e2f4f100cdc0580a 165 Pfam PF00255 Glutathione peroxidase 8 114 2.2E-34 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Atc_2782 3f285183d94f9b15e2f4f100cdc0580a 165 PIRSF PIRSF000303 1 165 9.9E-61 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Atc_2782 3f285183d94f9b15e2f4f100cdc0580a 165 SUPERFAMILY SSF52833 5 161 8.97E-55 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2782 3f285183d94f9b15e2f4f100cdc0580a 165 Gene3D G3DSA:3.40.30.10 1 165 1.8E-61 T 13-10-2018 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 234 1.6E-44 T 13-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 PIRSF PIRSF000497 1 387 8.4E-170 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 SUPERFAMILY SSF55973 117 235 1.1E-50 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 375 1.0E-67 T 13-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 SUPERFAMILY SSF55973 236 387 2.94E-68 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 Gene3D G3DSA:3.30.300.10 12 273 1.2E-175 T 13-10-2018 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 SUPERFAMILY SSF55973 4 111 2.71E-46 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 Gene3D G3DSA:3.30.300.10 6 236 1.2E-175 T 13-10-2018 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 385 1.8E-181 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.254 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 Gene3D G3DSA:3.30.300.10 103 377 1.2E-175 T 13-10-2018 Atc_0332 86fd1f8d84b6e1d1f3f27bf32dae071a 389 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 102 8.0E-42 T 13-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 702 52.412 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Gene3D G3DSA:3.40.50.140 1 138 1.3E-47 T 13-10-2018 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 622 8.2E-241 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 SUPERFAMILY SSF56712 4 601 1.57E-185 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Pfam PF01751 Toprim domain 4 117 4.0E-25 T 13-10-2018 IPR006171 TOPRIM domain Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Gene3D G3DSA:1.10.290.10 261 396 1.2E-170 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 290 312 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Gene3D G3DSA:2.70.20.10 188 470 1.2E-170 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 SMART SM00437 253 523 1.5E-114 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 SUPERFAMILY SSF57783 632 671 5.95E-11 T 13-10-2018 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 SUPERFAMILY SSF57783 586 623 1.24E-10 T 13-10-2018 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 SMART SM00493 3 103 7.3E-27 T 13-10-2018 IPR006171 TOPRIM domain Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 634 671 2.4E-14 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 589 623 8.8E-14 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 677 713 6.2E-13 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 9.5E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 9.5E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 9.5E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 9.5E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 486 500 9.5E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 SMART SM00436 108 196 2.9E-46 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Gene3D G3DSA:1.10.460.10 139 563 1.2E-170 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Gene3D G3DSA:3.30.65.10 628 675 1.2E-7 T 13-10-2018 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Gene3D G3DSA:3.30.65.10 575 627 1.3E-8 T 13-10-2018 Atc_0010 10bfaaa9c489bdaaf42ee226dbd68527 827 Pfam PF01131 DNA topoisomerase 134 560 1.6E-128 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_2678 3be168f08e7f957977a91ca66d088f26 264 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 48 63 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Atc_2678 3be168f08e7f957977a91ca66d088f26 264 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 37 260 2.9E-84 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Atc_2678 3be168f08e7f957977a91ca66d088f26 264 Gene3D G3DSA:3.40.50.150 43 263 8.7E-79 T 13-10-2018 Atc_2678 3be168f08e7f957977a91ca66d088f26 264 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 28 262 38.834 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Atc_2678 3be168f08e7f957977a91ca66d088f26 264 SUPERFAMILY SSF53335 26 262 2.63E-50 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2678 3be168f08e7f957977a91ca66d088f26 264 Pfam PF01209 ubiE/COQ5 methyltransferase family 33 261 1.2E-93 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Atc_2671 e5aa16320a7949d0c28d60616c2d0515 188 Gene3D G3DSA:3.40.50.880 1 182 1.3E-51 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_2671 e5aa16320a7949d0c28d60616c2d0515 188 SUPERFAMILY SSF52317 4 177 1.14E-47 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_2671 e5aa16320a7949d0c28d60616c2d0515 188 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 172 4.1E-50 T 13-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 Atc_2671 e5aa16320a7949d0c28d60616c2d0515 188 Pfam PF01965 DJ-1/PfpI family 4 165 1.9E-43 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atc_2724 538370ed1c09c9b00a2c97638f28bf56 555 Pfam PF00005 ABC transporter 22 191 2.1E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_2724 538370ed1c09c9b00a2c97638f28bf56 555 SUPERFAMILY SSF52540 303 522 1.67E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2724 538370ed1c09c9b00a2c97638f28bf56 555 Pfam PF00005 ABC transporter 340 473 3.6E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_2724 538370ed1c09c9b00a2c97638f28bf56 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 2.1E-289 T 13-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 Atc_2724 538370ed1c09c9b00a2c97638f28bf56 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_2724 538370ed1c09c9b00a2c97638f28bf56 555 SMART SM00382 31 242 1.8E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2724 538370ed1c09c9b00a2c97638f28bf56 555 SMART SM00382 348 526 6.3E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2724 538370ed1c09c9b00a2c97638f28bf56 555 Gene3D G3DSA:3.40.50.300 286 553 6.0E-73 T 13-10-2018 Atc_2724 538370ed1c09c9b00a2c97638f28bf56 555 Gene3D G3DSA:3.40.50.300 1 285 4.9E-83 T 13-10-2018 Atc_2724 538370ed1c09c9b00a2c97638f28bf56 555 Pfam PF12848 ABC transporter 230 305 6.9E-11 T 13-10-2018 IPR032781 ABC-transporter extension domain Atc_2724 538370ed1c09c9b00a2c97638f28bf56 555 SUPERFAMILY SSF52540 8 236 6.84E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2635 33251157d9b7387c4f9e67e22bb0e840 339 SUPERFAMILY SSF53756 1 338 5.57E-59 T 13-10-2018 Atc_2635 33251157d9b7387c4f9e67e22bb0e840 339 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 297 2.7E-76 T 13-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 Atc_2635 33251157d9b7387c4f9e67e22bb0e840 339 Gene3D G3DSA:3.40.50.2000 171 314 2.0E-29 T 13-10-2018 Atc_2635 33251157d9b7387c4f9e67e22bb0e840 339 Gene3D G3DSA:3.40.50.2000 1 159 3.2E-45 T 13-10-2018 Atc_2635 33251157d9b7387c4f9e67e22bb0e840 339 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 308 2.5E-45 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Atc_1820 27475e6f591c7f52e4afa4691f583651 160 Gene3D G3DSA:1.20.1260.100 6 157 3.4E-40 T 13-10-2018 IPR038330 TspO/MBR-related superfamily Atc_1820 27475e6f591c7f52e4afa4691f583651 160 Pfam PF03073 TspO/MBR family 13 152 4.3E-38 T 13-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 Atc_1820 27475e6f591c7f52e4afa4691f583651 160 PIRSF PIRSF005859 6 156 1.4E-39 T 13-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 Atc_2495 01f6591503da5a0584db50f68ca5cb1f 118 Gene3D G3DSA:1.10.3830.10 2 118 2.6E-34 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Atc_2495 01f6591503da5a0584db50f68ca5cb1f 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 13 112 2.6E-30 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Atc_2280 557cf5a68a5dac0f8cb2d8940a4e960c 449 SMART SM00382 149 293 1.9E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2280 557cf5a68a5dac0f8cb2d8940a4e960c 449 SUPERFAMILY SSF46689 340 440 1.25E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_2280 557cf5a68a5dac0f8cb2d8940a4e960c 449 Pfam PF00158 Sigma-54 interaction domain 129 295 1.4E-65 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_2280 557cf5a68a5dac0f8cb2d8940a4e960c 449 Gene3D G3DSA:3.40.50.300 120 300 3.7E-65 T 13-10-2018 Atc_2280 557cf5a68a5dac0f8cb2d8940a4e960c 449 Gene3D G3DSA:3.30.450.20 4 117 5.2E-5 T 13-10-2018 Atc_2280 557cf5a68a5dac0f8cb2d8940a4e960c 449 SUPERFAMILY SSF52540 129 370 2.54E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2280 557cf5a68a5dac0f8cb2d8940a4e960c 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atc_2280 557cf5a68a5dac0f8cb2d8940a4e960c 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 339 348 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_2280 557cf5a68a5dac0f8cb2d8940a4e960c 449 Gene3D G3DSA:1.10.10.60 393 436 1.7E-7 T 13-10-2018 Atc_2280 557cf5a68a5dac0f8cb2d8940a4e960c 449 Gene3D G3DSA:1.10.8.60 301 374 1.5E-18 T 13-10-2018 Atc_2506 e63575d5b0309c0f3790bd723d1f0ff4 192 ProSitePatterns PS01071 grpE protein signature. 131 173 - T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atc_2506 e63575d5b0309c0f3790bd723d1f0ff4 192 Gene3D G3DSA:3.90.20.20 16 119 3.4E-26 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Atc_2506 e63575d5b0309c0f3790bd723d1f0ff4 192 PRINTS PR00773 GrpE protein signature 154 173 2.5E-26 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atc_2506 e63575d5b0309c0f3790bd723d1f0ff4 192 PRINTS PR00773 GrpE protein signature 45 61 2.5E-26 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atc_2506 e63575d5b0309c0f3790bd723d1f0ff4 192 PRINTS PR00773 GrpE protein signature 128 143 2.5E-26 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atc_2506 e63575d5b0309c0f3790bd723d1f0ff4 192 PRINTS PR00773 GrpE protein signature 73 88 2.5E-26 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atc_2506 e63575d5b0309c0f3790bd723d1f0ff4 192 SUPERFAMILY SSF51064 123 175 2.48E-15 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Atc_2506 e63575d5b0309c0f3790bd723d1f0ff4 192 Pfam PF01025 GrpE 10 175 3.6E-46 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atc_2506 e63575d5b0309c0f3790bd723d1f0ff4 192 Hamap MF_01151 Protein GrpE [grpE]. 2 175 19.229 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atc_2506 e63575d5b0309c0f3790bd723d1f0ff4 192 SUPERFAMILY SSF58014 31 120 1.7E-24 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Atc_2506 e63575d5b0309c0f3790bd723d1f0ff4 192 Gene3D G3DSA:2.30.22.10 120 175 2.6E-21 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Atc_1764 c0e00adb34bdc3d708041b5670123c21 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 6.2E-139 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atc_1764 c0e00adb34bdc3d708041b5670123c21 338 Gene3D G3DSA:3.40.50.720 1 181 2.7E-78 T 13-10-2018 Atc_1764 c0e00adb34bdc3d708041b5670123c21 338 SUPERFAMILY SSF51735 1 182 8.69E-75 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1764 c0e00adb34bdc3d708041b5670123c21 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 46.034 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atc_1764 c0e00adb34bdc3d708041b5670123c21 338 Gene3D G3DSA:1.10.3730.40 182 338 7.3E-76 T 13-10-2018 Atc_1764 c0e00adb34bdc3d708041b5670123c21 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 1.9E-75 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atc_1764 c0e00adb34bdc3d708041b5670123c21 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 2.5E-68 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atc_1764 c0e00adb34bdc3d708041b5670123c21 338 SUPERFAMILY SSF48179 183 332 6.8E-72 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atc_1764 c0e00adb34bdc3d708041b5670123c21 338 PIRSF PIRSF000116 2 206 3.8E-46 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atc_1764 c0e00adb34bdc3d708041b5670123c21 338 PIRSF PIRSF000116 201 332 1.1E-13 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atc_0689 68a0906842f41a92288ecb419b08e244 297 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 4 272 52.941 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 162 186 - T 13-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 Gene3D G3DSA:3.40.1500.10 2 297 4.4E-133 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 Pfam PF01218 Coproporphyrinogen III oxidase 10 297 1.8E-130 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 PIRSF PIRSF000166 2 297 2.0E-123 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 PRINTS PR00073 Coprogen oxidase signature 49 70 1.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 PRINTS PR00073 Coprogen oxidase signature 91 115 1.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 PRINTS PR00073 Coprogen oxidase signature 229 256 1.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 PRINTS PR00073 Coprogen oxidase signature 32 48 1.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 PRINTS PR00073 Coprogen oxidase signature 158 187 1.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 PRINTS PR00073 Coprogen oxidase signature 121 143 1.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 PRINTS PR00073 Coprogen oxidase signature 257 283 1.7E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0689 68a0906842f41a92288ecb419b08e244 297 SUPERFAMILY SSF102886 9 297 2.62E-130 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_0550 8e9fdad82abc6a4d30a69aa17d786f19 119 SUPERFAMILY SSF46785 11 105 4.14E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0550 8e9fdad82abc6a4d30a69aa17d786f19 119 Pfam PF12840 Helix-turn-helix domain 13 68 7.3E-13 T 13-10-2018 Atc_0550 8e9fdad82abc6a4d30a69aa17d786f19 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 4.8E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0550 8e9fdad82abc6a4d30a69aa17d786f19 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 4.8E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0550 8e9fdad82abc6a4d30a69aa17d786f19 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 4.8E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0550 8e9fdad82abc6a4d30a69aa17d786f19 119 Gene3D G3DSA:1.10.10.10 2 104 4.1E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0550 8e9fdad82abc6a4d30a69aa17d786f19 119 SMART SM00418 13 91 1.7E-22 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1903 8e9fdad82abc6a4d30a69aa17d786f19 119 SUPERFAMILY SSF46785 11 105 4.14E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1903 8e9fdad82abc6a4d30a69aa17d786f19 119 Pfam PF12840 Helix-turn-helix domain 13 68 7.3E-13 T 13-10-2018 Atc_1903 8e9fdad82abc6a4d30a69aa17d786f19 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 4.8E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1903 8e9fdad82abc6a4d30a69aa17d786f19 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 4.8E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1903 8e9fdad82abc6a4d30a69aa17d786f19 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 4.8E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1903 8e9fdad82abc6a4d30a69aa17d786f19 119 Gene3D G3DSA:1.10.10.10 2 104 4.1E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1903 8e9fdad82abc6a4d30a69aa17d786f19 119 SMART SM00418 13 91 1.7E-22 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1107 30cc3bfc0e7b570567509c633b8520a4 301 Gene3D G3DSA:3.40.190.10 108 258 2.2E-50 T 13-10-2018 Atc_1107 30cc3bfc0e7b570567509c633b8520a4 301 SUPERFAMILY SSF53850 26 294 1.09E-41 T 13-10-2018 Atc_1107 30cc3bfc0e7b570567509c633b8520a4 301 Gene3D G3DSA:3.40.190.10 28 287 2.2E-50 T 13-10-2018 Atc_1107 30cc3bfc0e7b570567509c633b8520a4 301 Pfam PF13531 Bacterial extracellular solute-binding protein 28 292 7.2E-46 T 13-10-2018 Atc_1813 2971ca5938c97180f19e9cde57560fca 386 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 74 123 9.5E-16 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1813 2971ca5938c97180f19e9cde57560fca 386 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 36 68 4.2E-8 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1813 2971ca5938c97180f19e9cde57560fca 386 Pfam PF01610 Transposase 138 372 1.0E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1664 9289f2ef0ede3ecf9d344d04a7de9882 191 Gene3D G3DSA:2.60.120.10 83 189 1.1E-19 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_1664 9289f2ef0ede3ecf9d344d04a7de9882 191 Pfam PF13560 Helix-turn-helix domain 13 68 1.2E-14 T 13-10-2018 Atc_1664 9289f2ef0ede3ecf9d344d04a7de9882 191 SUPERFAMILY SSF47413 8 78 5.35E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_1664 9289f2ef0ede3ecf9d344d04a7de9882 191 Gene3D G3DSA:1.10.260.40 10 80 3.6E-20 T 13-10-2018 Atc_1664 9289f2ef0ede3ecf9d344d04a7de9882 191 SUPERFAMILY SSF51182 65 189 7.92E-24 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Atc_1664 9289f2ef0ede3ecf9d344d04a7de9882 191 Pfam PF07883 Cupin domain 118 188 6.3E-12 T 13-10-2018 IPR013096 Cupin 2, conserved barrel Atc_1664 9289f2ef0ede3ecf9d344d04a7de9882 191 SMART SM00530 17 72 8.5E-16 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atc_1909 7e4df847e7fed7e6e97feab348ab0f12 189 Gene3D G3DSA:3.40.30.10 37 187 9.9E-25 T 13-10-2018 Atc_1909 7e4df847e7fed7e6e97feab348ab0f12 189 SUPERFAMILY SSF52833 25 185 2.34E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1909 7e4df847e7fed7e6e97feab348ab0f12 189 Pfam PF13098 Thioredoxin-like domain 41 185 4.6E-12 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_0544 7e4df847e7fed7e6e97feab348ab0f12 189 Gene3D G3DSA:3.40.30.10 37 187 9.9E-25 T 13-10-2018 Atc_0544 7e4df847e7fed7e6e97feab348ab0f12 189 SUPERFAMILY SSF52833 25 185 2.34E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0544 7e4df847e7fed7e6e97feab348ab0f12 189 Pfam PF13098 Thioredoxin-like domain 41 185 4.6E-12 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_2571 a047b756e31db401f549d1ca3d9c33b2 165 PIRSF PIRSF000216 2 165 3.1E-36 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2571 a047b756e31db401f549d1ca3d9c33b2 165 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 162 1.1E-30 T 13-10-2018 Atc_2571 a047b756e31db401f549d1ca3d9c33b2 165 SUPERFAMILY SSF52833 13 165 1.12E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2571 a047b756e31db401f549d1ca3d9c33b2 165 Gene3D G3DSA:1.10.10.1590 12 80 1.1E-10 T 13-10-2018 Atc_2571 a047b756e31db401f549d1ca3d9c33b2 165 Gene3D G3DSA:3.40.30.10 81 165 3.8E-16 T 13-10-2018 Atc_1150 5cbec9360b511ef106566fd0e36241e9 255 SUPERFAMILY SSF56300 1 240 1.83E-27 T 13-10-2018 Atc_1150 5cbec9360b511ef106566fd0e36241e9 255 Pfam PF00149 Calcineurin-like phosphoesterase 1 221 5.2E-11 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atc_1150 5cbec9360b511ef106566fd0e36241e9 255 Gene3D G3DSA:3.60.21.10 1 236 2.9E-17 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Atc_1727 420db96b870d029eeb654951a72e8113 793 TIGRFAM TIGR02470 sucr_synth: sucrose synthase 18 792 0.0 T 13-10-2018 IPR012820 Sucrose synthase, plant/cyanobacteria GO:0005985|GO:0016157 KEGG: 00500+2.4.1.13|MetaCyc: PWY-3801 Atc_1727 420db96b870d029eeb654951a72e8113 793 Gene3D G3DSA:3.40.50.2000 268 784 2.8E-229 T 13-10-2018 Atc_1727 420db96b870d029eeb654951a72e8113 793 SUPERFAMILY SSF53756 284 753 4.71E-52 T 13-10-2018 Atc_1727 420db96b870d029eeb654951a72e8113 793 Pfam PF00534 Glycosyl transferases group 1 550 722 1.8E-28 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Atc_1727 420db96b870d029eeb654951a72e8113 793 Pfam PF00862 Sucrose synthase 3 542 4.8E-198 T 13-10-2018 IPR000368 Sucrose synthase GO:0005985|GO:0016157 Atc_1727 420db96b870d029eeb654951a72e8113 793 Gene3D G3DSA:3.10.450.330 1 134 3.6E-24 T 13-10-2018 Atc_1727 420db96b870d029eeb654951a72e8113 793 Gene3D G3DSA:1.20.120.1230 137 263 2.7E-37 T 13-10-2018 Atc_1727 420db96b870d029eeb654951a72e8113 793 Gene3D G3DSA:3.40.50.2000 516 743 2.8E-229 T 13-10-2018 Atc_0804 13a42e4d6bd2f5712a221985a808a9a8 279 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 257 1.6E-73 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Atc_0804 13a42e4d6bd2f5712a221985a808a9a8 279 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 259 18.649 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Atc_0804 13a42e4d6bd2f5712a221985a808a9a8 279 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 254 4.1E-72 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 Gene3D G3DSA:3.50.50.60 124 247 6.5E-122 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 68 78 1.6E-79 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 135 147 1.6E-79 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 262 1.6E-79 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 1.6E-79 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 150 174 1.6E-79 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 1.6E-79 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 202 218 1.6E-79 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 14 36 1.6E-79 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 47 62 1.6E-79 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 Gene3D G3DSA:3.50.50.60 16 316 6.5E-122 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 306 7.1E-48 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 6.8E-39 T 13-10-2018 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 6.8E-39 T 13-10-2018 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 6.8E-39 T 13-10-2018 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 6.8E-39 T 13-10-2018 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 6.8E-39 T 13-10-2018 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 142 162 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 SUPERFAMILY SSF51905 11 317 1.7E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2479 5a8d27333e3bae8541d075ae67f7b906 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 14 317 1.8E-123 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Atc_1123 7355ca40daff5b33ab8b855a153dc7ed 251 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 1 15 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atc_1123 7355ca40daff5b33ab8b855a153dc7ed 251 Gene3D G3DSA:3.40.1010.10 1 111 3.1E-41 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Atc_1123 7355ca40daff5b33ab8b855a153dc7ed 251 Gene3D G3DSA:3.30.950.10 112 248 8.3E-43 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Atc_1123 7355ca40daff5b33ab8b855a153dc7ed 251 SUPERFAMILY SSF53790 1 236 8.24E-69 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Atc_1123 7355ca40daff5b33ab8b855a153dc7ed 251 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 1 229 8.0E-86 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atc_1123 7355ca40daff5b33ab8b855a153dc7ed 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 206 4.0E-48 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Atc_1123 7355ca40daff5b33ab8b855a153dc7ed 251 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 10 683 3.7E-293 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 SUPERFAMILY SSF81665 22 307 2.75E-10 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 Gene3D G3DSA:2.70.150.20 105 213 4.1E-23 T 13-10-2018 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 Pfam PF00122 E1-E2 ATPase 113 292 9.8E-30 T 13-10-2018 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 Gene3D G3DSA:3.40.1110.10 324 458 2.9E-43 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 315 321 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 10 686 38.137 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 SUPERFAMILY SSF56784 301 567 4.0E-37 T 13-10-2018 IPR036412 HAD-like superfamily Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 Gene3D G3DSA:3.40.50.1000 499 567 2.4E-24 T 13-10-2018 IPR023214 HAD superfamily Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 Gene3D G3DSA:1.20.1110.10 568 627 2.4E-24 T 13-10-2018 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 379 609 7.7E-45 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 73 340 9.7E-27 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 470 480 1.5E-24 T 13-10-2018 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 155 169 1.5E-24 T 13-10-2018 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 313 327 1.5E-24 T 13-10-2018 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 523 542 1.5E-24 T 13-10-2018 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 558 1.5E-24 T 13-10-2018 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 SUPERFAMILY SSF81653 113 208 1.06E-19 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Atc_0138 3f451b6f58e57fb4777f27ab78218ed5 686 Pfam PF00702 haloacid dehalogenase-like hydrolase 311 537 2.4E-34 T 13-10-2018 Atc_2514 2e30bdf217524bca5af5f4fe46256c43 184 Gene3D G3DSA:3.50.70.10 26 166 1.1E-5 T 13-10-2018 IPR016088 Chalcone isomerase, 3-layer sandwich KEGG: 00941+5.5.1.6|MetaCyc: PWY-2002|MetaCyc: PWY-5059|MetaCyc: PWY-6325|MetaCyc: PWY-6787|MetaCyc: PWY-7397|MetaCyc: PWY-7897 Atc_2514 2e30bdf217524bca5af5f4fe46256c43 184 Pfam PF16036 Chalcone isomerase-like 30 182 8.0E-17 T 13-10-2018 IPR016087 Chalcone isomerase GO:0016872 Atc_2196 c8e053773404bad40d46875cd1a5e6e6 142 SUPERFAMILY SSF52402 2 141 1.84E-31 T 13-10-2018 Atc_2196 c8e053773404bad40d46875cd1a5e6e6 142 Pfam PF00582 Universal stress protein family 1 141 6.1E-29 T 13-10-2018 IPR006016 UspA Atc_2196 c8e053773404bad40d46875cd1a5e6e6 142 Gene3D G3DSA:3.40.50.620 1 141 3.8E-36 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2196 c8e053773404bad40d46875cd1a5e6e6 142 PRINTS PR01438 Universal stress protein signature 101 113 1.2E-17 T 13-10-2018 IPR006015 Universal stress protein A Atc_2196 c8e053773404bad40d46875cd1a5e6e6 142 PRINTS PR01438 Universal stress protein signature 119 141 1.2E-17 T 13-10-2018 IPR006015 Universal stress protein A Atc_2196 c8e053773404bad40d46875cd1a5e6e6 142 PRINTS PR01438 Universal stress protein signature 2 20 1.2E-17 T 13-10-2018 IPR006015 Universal stress protein A Atc_0273 e3978f3d71f4803b0def66ed8db6f7a4 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Atc_0273 e3978f3d71f4803b0def66ed8db6f7a4 123 SUPERFAMILY SSF89360 17 112 2.35E-32 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Atc_0273 e3978f3d71f4803b0def66ed8db6f7a4 123 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 123 36.123 T 13-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 Atc_0273 e3978f3d71f4803b0def66ed8db6f7a4 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 4.7E-39 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Atc_0273 e3978f3d71f4803b0def66ed8db6f7a4 123 Gene3D G3DSA:2.60.300.12 17 123 1.7E-34 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Atc_0273 e3978f3d71f4803b0def66ed8db6f7a4 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 118 5.6E-21 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Atc_1303 f13a85a9d74645eef170b31314e676e3 107 Pfam PF02575 YbaB/EbfC DNA-binding family 9 99 1.3E-35 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Atc_1303 f13a85a9d74645eef170b31314e676e3 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 97 22.181 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Atc_1303 f13a85a9d74645eef170b31314e676e3 107 Gene3D G3DSA:3.30.1310.10 1 107 1.1E-41 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Atc_1303 f13a85a9d74645eef170b31314e676e3 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 103 3.4E-29 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Atc_1303 f13a85a9d74645eef170b31314e676e3 107 SUPERFAMILY SSF82607 9 103 1.06E-33 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Atc_1303 f13a85a9d74645eef170b31314e676e3 107 PIRSF PIRSF004555 1 107 1.2E-38 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Atc_1538 8efc6f889fd3bbd81597335457db59f3 311 Gene3D G3DSA:1.20.58.340 129 252 1.1E-12 T 13-10-2018 Atc_1538 8efc6f889fd3bbd81597335457db59f3 311 SUPERFAMILY SSF144083 246 306 4.58E-9 T 13-10-2018 Atc_1538 8efc6f889fd3bbd81597335457db59f3 311 Gene3D G3DSA:1.20.58.340 254 311 9.5E-6 T 13-10-2018 Atc_1538 8efc6f889fd3bbd81597335457db59f3 311 Gene3D G3DSA:3.30.460.20 17 121 3.2E-12 T 13-10-2018 Atc_1538 8efc6f889fd3bbd81597335457db59f3 311 Pfam PF01544 CorA-like Mg2+ transporter protein 22 305 3.7E-48 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Atc_1538 8efc6f889fd3bbd81597335457db59f3 311 SUPERFAMILY SSF143865 23 243 6.41E-32 T 13-10-2018 Atc_2240 a75e29d499856abf4061b6a30b803fd2 648 Gene3D G3DSA:1.50.10.20 47 322 1.6E-220 T 13-10-2018 Atc_2240 a75e29d499856abf4061b6a30b803fd2 648 Gene3D G3DSA:1.50.10.20 29 639 1.6E-220 T 13-10-2018 Atc_2240 a75e29d499856abf4061b6a30b803fd2 648 SUPERFAMILY SSF48239 255 641 1.41E-94 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Atc_2240 a75e29d499856abf4061b6a30b803fd2 648 SUPERFAMILY SSF48239 50 318 4.87E-75 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Atc_2240 a75e29d499856abf4061b6a30b803fd2 648 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 323 641 1.3E-143 T 13-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 Atc_2240 a75e29d499856abf4061b6a30b803fd2 648 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 26 641 2.1E-184 T 13-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 Atc_2240 a75e29d499856abf4061b6a30b803fd2 648 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 26 313 3.7E-118 T 13-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 Atc_2240 a75e29d499856abf4061b6a30b803fd2 648 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 21 645 2.9E-240 T 13-10-2018 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072 Atc_2374 c4f52a1bad42dcd62777dc9db1e36604 601 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 228 3.3E-42 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Atc_2374 c4f52a1bad42dcd62777dc9db1e36604 601 SUPERFAMILY SSF56601 245 596 6.0E-91 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_2374 c4f52a1bad42dcd62777dc9db1e36604 601 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 15 594 1.1E-196 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_2374 c4f52a1bad42dcd62777dc9db1e36604 601 Pfam PF00905 Penicillin binding protein transpeptidase domain 262 590 1.5E-66 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atc_2374 c4f52a1bad42dcd62777dc9db1e36604 601 SUPERFAMILY SSF56519 52 244 4.05E-45 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Atc_2374 c4f52a1bad42dcd62777dc9db1e36604 601 Gene3D G3DSA:3.40.710.10 244 599 3.2E-96 T 13-10-2018 Atc_2374 c4f52a1bad42dcd62777dc9db1e36604 601 Gene3D G3DSA:3.90.1310.10 59 240 5.1E-41 T 13-10-2018 Atc_2374 c4f52a1bad42dcd62777dc9db1e36604 601 Gene3D G3DSA:3.30.1390.30 80 155 5.1E-41 T 13-10-2018 Atc_0390 9e2b5467b8736c6043eda40c3d8a89c9 182 SUPERFAMILY SSF51182 1 179 2.67E-74 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Atc_0390 9e2b5467b8736c6043eda40c3d8a89c9 182 Gene3D G3DSA:2.60.120.10 1 182 1.5E-70 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_0390 9e2b5467b8736c6043eda40c3d8a89c9 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 181 1.0E-70 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Atc_0390 9e2b5467b8736c6043eda40c3d8a89c9 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 178 8.0E-79 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Atc_0390 9e2b5467b8736c6043eda40c3d8a89c9 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 7.1E-72 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Atc_2679 5ddd81fc5d02ea78102ef1b198edb0b1 783 PIRSF PIRSF000382 1 183 1.6E-66 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Atc_2679 5ddd81fc5d02ea78102ef1b198edb0b1 783 PIRSF PIRSF000382 191 783 7.0E-258 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Atc_2679 5ddd81fc5d02ea78102ef1b198edb0b1 783 SUPERFAMILY SSF51726 5 418 3.14E-110 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Atc_2679 5ddd81fc5d02ea78102ef1b198edb0b1 783 Gene3D G3DSA:3.20.20.210 6 548 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Atc_2679 5ddd81fc5d02ea78102ef1b198edb0b1 783 Gene3D G3DSA:3.20.20.210 413 780 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Atc_2679 5ddd81fc5d02ea78102ef1b198edb0b1 783 SUPERFAMILY SSF51726 420 781 6.15E-120 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Atc_2679 5ddd81fc5d02ea78102ef1b198edb0b1 783 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 782 37.266 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Atc_2679 5ddd81fc5d02ea78102ef1b198edb0b1 783 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 338 1.0E-119 T 13-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Atc_2679 5ddd81fc5d02ea78102ef1b198edb0b1 783 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 455 777 2.7E-153 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Atc_1180 5236b080954e8e39dde3192262fc5480 1167 PRINTS PR00379 Intein signature 593 605 9.9E-5 T 13-10-2018 IPR006142 Intein GO:0016539 Atc_1180 5236b080954e8e39dde3192262fc5480 1167 PRINTS PR00379 Intein signature 688 700 9.9E-5 T 13-10-2018 IPR006142 Intein GO:0016539 Atc_1180 5236b080954e8e39dde3192262fc5480 1167 PRINTS PR00379 Intein signature 714 729 9.9E-5 T 13-10-2018 IPR006142 Intein GO:0016539 Atc_1180 5236b080954e8e39dde3192262fc5480 1167 SUPERFAMILY SSF51294 471 815 5.76E-35 T 13-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Atc_1180 5236b080954e8e39dde3192262fc5480 1167 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 191 401 2.5E-14 T 13-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 Atc_1180 5236b080954e8e39dde3192262fc5480 1167 Gene3D G3DSA:3.40.50.300 916 1122 1.1E-21 T 13-10-2018 Atc_1180 5236b080954e8e39dde3192262fc5480 1167 SUPERFAMILY SSF55608 672 766 9.07E-14 T 13-10-2018 IPR027434 Homing endonuclease Atc_1180 5236b080954e8e39dde3192262fc5480 1167 Gene3D G3DSA:2.170.16.10 472 572 4.8E-16 T 13-10-2018 Atc_1180 5236b080954e8e39dde3192262fc5480 1167 Pfam PF05203 Hom_end-associated Hint 472 549 1.2E-16 T 13-10-2018 IPR007868 Hom-end-associated Hint GO:0030908 Atc_1180 5236b080954e8e39dde3192262fc5480 1167 SUPERFAMILY SSF52540 788 1112 2.15E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1180 5236b080954e8e39dde3192262fc5480 1167 Gene3D G3DSA:3.10.28.10 575 780 1.7E-34 T 13-10-2018 IPR027434 Homing endonuclease Atc_2488 2ce2a3e698c1104ca26bdcc2d3ddd25c 247 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 165 245 2.7E-32 T 13-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 Atc_2488 2ce2a3e698c1104ca26bdcc2d3ddd25c 247 Pfam PF08534 Redoxin 6 161 4.1E-33 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Atc_2488 2ce2a3e698c1104ca26bdcc2d3ddd25c 247 PRINTS PR00160 Glutaredoxin signature 217 230 3.2E-13 T 13-10-2018 IPR014025 Glutaredoxin subgroup Atc_2488 2ce2a3e698c1104ca26bdcc2d3ddd25c 247 PRINTS PR00160 Glutaredoxin signature 174 192 3.2E-13 T 13-10-2018 IPR014025 Glutaredoxin subgroup Atc_2488 2ce2a3e698c1104ca26bdcc2d3ddd25c 247 PRINTS PR00160 Glutaredoxin signature 231 244 3.2E-13 T 13-10-2018 IPR014025 Glutaredoxin subgroup Atc_2488 2ce2a3e698c1104ca26bdcc2d3ddd25c 247 Gene3D G3DSA:3.40.30.10 174 245 4.2E-19 T 13-10-2018 Atc_2488 2ce2a3e698c1104ca26bdcc2d3ddd25c 247 Pfam PF00462 Glutaredoxin 174 234 9.3E-16 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Atc_2488 2ce2a3e698c1104ca26bdcc2d3ddd25c 247 SUPERFAMILY SSF52833 5 243 1.26E-42 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2488 2ce2a3e698c1104ca26bdcc2d3ddd25c 247 ProSitePatterns PS00195 Glutaredoxin active site. 176 192 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Atc_2488 2ce2a3e698c1104ca26bdcc2d3ddd25c 247 Gene3D G3DSA:3.40.30.10 5 166 4.8E-62 T 13-10-2018 Atc_1601 557b112267dd5dca48aed493ff3d875b 249 Gene3D G3DSA:2.40.10.480 94 161 1.4E-7 T 13-10-2018 Atc_1601 557b112267dd5dca48aed493ff3d875b 249 Gene3D G3DSA:2.40.10.480 163 233 1.7E-16 T 13-10-2018 Atc_1601 557b112267dd5dca48aed493ff3d875b 249 Pfam PF13360 PQQ-like domain 179 239 2.1E-9 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atc_1601 557b112267dd5dca48aed493ff3d875b 249 SUPERFAMILY SSF50998 43 237 2.22E-23 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Atc_1601 557b112267dd5dca48aed493ff3d875b 249 SMART SM00564 137 194 56.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1601 557b112267dd5dca48aed493ff3d875b 249 SMART SM00564 202 234 6.5E-6 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1601 557b112267dd5dca48aed493ff3d875b 249 SMART SM00564 94 126 0.42 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 SUPERFAMILY SSF55103 381 773 1.87E-35 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 SUPERFAMILY SSF46548 804 904 5.23E-12 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 Pfam PF12447 Protein of unknown function (DUF3683) 4 114 9.6E-49 T 13-10-2018 IPR022153 Protein of unknown function DUF3683 Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 SUPERFAMILY SSF56176 126 394 1.26E-53 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 Pfam PF11880 Domain of unknown function (DUF3400) 1233 1277 1.9E-21 T 13-10-2018 IPR021817 Protein of unknown function DUF3400 Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 874 885 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 Pfam PF13183 4Fe-4S dicluster domain 809 888 1.0E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 Gene3D G3DSA:3.30.70.2740 664 737 5.0E-6 T 13-10-2018 Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 Pfam PF02913 FAD linked oxidases, C-terminal domain 407 543 1.8E-9 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 Pfam PF02913 FAD linked oxidases, C-terminal domain 679 773 1.3E-18 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 Gene3D G3DSA:1.10.1060.10 787 905 2.5E-5 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 Pfam PF02754 Cysteine-rich domain 1017 1105 3.0E-5 T 13-10-2018 IPR004017 Cysteine-rich domain Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 Pfam PF02754 Cysteine-rich domain 1142 1230 0.05 T 13-10-2018 IPR004017 Cysteine-rich domain Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 Gene3D G3DSA:3.30.465.40 126 319 1.6E-35 T 13-10-2018 Atc_1507 135b82b8c14e19b4539f2ea046d8ae2a 1277 Pfam PF01565 FAD binding domain 165 310 1.2E-26 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Atc_0030 8c9c7c0d3284b548e59d659c53244486 179 Gene3D G3DSA:1.10.520.20 2 112 9.0E-20 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0030 8c9c7c0d3284b548e59d659c53244486 179 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 177 1.4E-35 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0030 8c9c7c0d3284b548e59d659c53244486 179 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 139 158 - T 13-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0030 8c9c7c0d3284b548e59d659c53244486 179 SUPERFAMILY SSF47928 4 101 1.26E-18 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0030 8c9c7c0d3284b548e59d659c53244486 179 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 179 17.519 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0030 8c9c7c0d3284b548e59d659c53244486 179 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 177 2.9E-41 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0030 8c9c7c0d3284b548e59d659c53244486 179 PRINTS PR00125 ATP synthase delta subunit signature 7 26 5.0E-20 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0030 8c9c7c0d3284b548e59d659c53244486 179 PRINTS PR00125 ATP synthase delta subunit signature 137 152 5.0E-20 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0030 8c9c7c0d3284b548e59d659c53244486 179 PRINTS PR00125 ATP synthase delta subunit signature 86 100 5.0E-20 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0030 8c9c7c0d3284b548e59d659c53244486 179 PRINTS PR00125 ATP synthase delta subunit signature 152 170 5.0E-20 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0030 8c9c7c0d3284b548e59d659c53244486 179 PRINTS PR00125 ATP synthase delta subunit signature 75 86 5.0E-20 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_1104 0ccd587f25e7313b251c31400bff1f16 437 SUPERFAMILY SSF53098 149 313 6.32E-28 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1104 0ccd587f25e7313b251c31400bff1f16 437 SUPERFAMILY SSF46689 46 135 2.15E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_1104 0ccd587f25e7313b251c31400bff1f16 437 Pfam PF00665 Integrase core domain 153 270 8.6E-22 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_1104 0ccd587f25e7313b251c31400bff1f16 437 Gene3D G3DSA:3.30.420.10 143 329 3.6E-22 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_1104 0ccd587f25e7313b251c31400bff1f16 437 Pfam PF13565 Homeodomain-like domain 55 131 5.0E-12 T 13-10-2018 Atc_0757 0ccd587f25e7313b251c31400bff1f16 437 SUPERFAMILY SSF53098 149 313 6.32E-28 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_0757 0ccd587f25e7313b251c31400bff1f16 437 SUPERFAMILY SSF46689 46 135 2.15E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0757 0ccd587f25e7313b251c31400bff1f16 437 Pfam PF00665 Integrase core domain 153 270 8.6E-22 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_0757 0ccd587f25e7313b251c31400bff1f16 437 Gene3D G3DSA:3.30.420.10 143 329 3.6E-22 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_0757 0ccd587f25e7313b251c31400bff1f16 437 Pfam PF13565 Homeodomain-like domain 55 131 5.0E-12 T 13-10-2018 Atc_1483 fa1449a1414686932d0e24588d5b532f 107 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 71 87 5.4E-13 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Atc_1483 fa1449a1414686932d0e24588d5b532f 107 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 36 52 5.4E-13 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Atc_1483 fa1449a1414686932d0e24588d5b532f 107 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 92 105 5.4E-13 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Atc_1483 fa1449a1414686932d0e24588d5b532f 107 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 2 107 17.388 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Atc_1483 fa1449a1414686932d0e24588d5b532f 107 Pfam PF02049 Flagellar hook-basal body complex protein FliE 22 106 2.1E-29 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Atc_1483 fa1449a1414686932d0e24588d5b532f 107 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 7 106 8.4E-22 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Atc_1365 9c1ba432000009fd3f78f09b31ea5474 142 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.1E-53 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atc_1365 9c1ba432000009fd3f78f09b31ea5474 142 SMART SM00562 3 140 5.6E-84 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atc_1365 9c1ba432000009fd3f78f09b31ea5474 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atc_1365 9c1ba432000009fd3f78f09b31ea5474 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atc_1365 9c1ba432000009fd3f78f09b31ea5474 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atc_1365 9c1ba432000009fd3f78f09b31ea5474 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atc_1365 9c1ba432000009fd3f78f09b31ea5474 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atc_1365 9c1ba432000009fd3f78f09b31ea5474 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.562 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atc_1365 9c1ba432000009fd3f78f09b31ea5474 142 SUPERFAMILY SSF54919 1 140 4.58E-56 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atc_1365 9c1ba432000009fd3f78f09b31ea5474 142 Gene3D G3DSA:3.30.70.141 1 139 1.8E-56 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atc_1700 925761e038e6d198b7b506f8a55bb82b 141 Pfam PF14489 QueF-like protein 40 117 1.1E-30 T 13-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Atc_1700 925761e038e6d198b7b506f8a55bb82b 141 PIRSF PIRSF027377 2 124 1.5E-50 T 13-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Atc_1700 925761e038e6d198b7b506f8a55bb82b 141 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 7 116 7.4E-50 T 13-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Atc_1700 925761e038e6d198b7b506f8a55bb82b 141 Gene3D G3DSA:3.30.1130.10 3 130 4.2E-39 T 13-10-2018 Atc_1700 925761e038e6d198b7b506f8a55bb82b 141 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 141 48.71 T 13-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Atc_1700 925761e038e6d198b7b506f8a55bb82b 141 SUPERFAMILY SSF55620 6 113 1.04E-25 T 13-10-2018 Atc_1496 752476649289f206448ee8700268909f 375 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 351 2.5E-122 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Atc_1496 752476649289f206448ee8700268909f 375 Gene3D G3DSA:3.40.1690.10 218 354 2.3E-56 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Atc_1496 752476649289f206448ee8700268909f 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.9E-41 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atc_1496 752476649289f206448ee8700268909f 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.9E-41 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atc_1496 752476649289f206448ee8700268909f 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.9E-41 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atc_1496 752476649289f206448ee8700268909f 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.9E-41 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atc_1496 752476649289f206448ee8700268909f 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.9E-41 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atc_1496 752476649289f206448ee8700268909f 375 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 346 2.8E-122 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atc_1496 752476649289f206448ee8700268909f 375 SUPERFAMILY SSF160544 245 350 9.16E-40 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Atc_2319 caa5d66c6ade4dacc70b2fdff64f4ec2 316 Gene3D G3DSA:3.90.1720.10 144 303 3.9E-42 T 13-10-2018 Atc_2319 caa5d66c6ade4dacc70b2fdff64f4ec2 316 SUPERFAMILY SSF54001 190 311 7.36E-44 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Atc_2319 caa5d66c6ade4dacc70b2fdff64f4ec2 316 Pfam PF00877 NlpC/P60 family 202 308 1.0E-28 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Atc_2778 10185d3d9b9a5f397628a8e1caf3f07d 176 SUPERFAMILY SSF48452 21 155 6.64E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2778 10185d3d9b9a5f397628a8e1caf3f07d 176 SMART SM00028 122 155 83.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_2778 10185d3d9b9a5f397628a8e1caf3f07d 176 SMART SM00028 18 51 300.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_2778 10185d3d9b9a5f397628a8e1caf3f07d 176 SMART SM00028 86 119 19.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_2778 10185d3d9b9a5f397628a8e1caf3f07d 176 SMART SM00028 52 85 0.22 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_2778 10185d3d9b9a5f397628a8e1caf3f07d 176 Pfam PF13432 Tetratricopeptide repeat 91 154 6.6E-4 T 13-10-2018 Atc_2778 10185d3d9b9a5f397628a8e1caf3f07d 176 Pfam PF13432 Tetratricopeptide repeat 29 83 4.7E-8 T 13-10-2018 Atc_2778 10185d3d9b9a5f397628a8e1caf3f07d 176 Gene3D G3DSA:1.25.40.10 19 173 6.1E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 SUPERFAMILY SSF82714 763 851 1.07E-9 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1748 f99fdbd7d42af5558389918584024de8 1095 Pfam PF00873 AcrB/AcrD/AcrF family 20 1082 1.2E-156 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 SUPERFAMILY SSF82866 851 1089 2.75E-44 T 13-10-2018 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 SUPERFAMILY SSF82693 144 344 6.1E-15 T 13-10-2018 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 SUPERFAMILY SSF82866 311 514 3.66E-38 T 13-10-2018 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 SUPERFAMILY SSF82714 192 273 3.79E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1748 f99fdbd7d42af5558389918584024de8 1095 SUPERFAMILY SSF82693 606 715 8.89E-13 T 13-10-2018 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 Gene3D G3DSA:1.20.1640.10 528 1081 3.5E-240 T 13-10-2018 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 Gene3D G3DSA:3.30.70.1430 605 713 3.5E-240 T 13-10-2018 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 Gene3D G3DSA:3.30.70.1440 714 931 3.5E-240 T 13-10-2018 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.5E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 1.5E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 1.5E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 PRINTS PR00702 Acriflavin resistance protein family signature 20 44 1.5E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 1.5E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 PRINTS PR00702 Acriflavin resistance protein family signature 487 510 1.5E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 Gene3D G3DSA:1.20.1640.10 23 527 3.5E-240 T 13-10-2018 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 SUPERFAMILY SSF82693 50 144 4.19E-16 T 13-10-2018 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 Gene3D G3DSA:3.30.2090.10 188 279 3.5E-240 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1748 f99fdbd7d42af5558389918584024de8 1095 Gene3D G3DSA:3.30.70.1320 142 346 3.5E-240 T 13-10-2018 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 Gene3D G3DSA:3.30.70.1430 50 862 3.5E-240 T 13-10-2018 Atc_1748 f99fdbd7d42af5558389918584024de8 1095 Gene3D G3DSA:3.30.2090.10 764 854 3.5E-240 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1658 c50c4f40bc4e14eb8197d07694822347 221 Gene3D G3DSA:1.20.1260.10 46 217 2.6E-58 T 13-10-2018 IPR012347 Ferritin-like Atc_1658 c50c4f40bc4e14eb8197d07694822347 221 SUPERFAMILY SSF47240 51 191 8.11E-11 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_1658 c50c4f40bc4e14eb8197d07694822347 221 Pfam PF09968 Uncharacterized protein domain (DUF2202) 51 205 3.8E-58 T 13-10-2018 IPR019243 Domain of unknown function DUF2202 Atc_1441 167121a17c3f31b778aece206b97cdd2 611 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 46 563 2.9E-133 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 Atc_1441 167121a17c3f31b778aece206b97cdd2 611 Pfam PF01343 Peptidase family S49 384 535 1.1E-38 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Atc_1441 167121a17c3f31b778aece206b97cdd2 611 Pfam PF01343 Peptidase family S49 131 287 2.2E-26 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Atc_1441 167121a17c3f31b778aece206b97cdd2 611 PIRSF PIRSF001217 4 590 4.3E-152 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 Atc_1441 167121a17c3f31b778aece206b97cdd2 611 Gene3D G3DSA:3.90.226.10 88 306 6.1E-133 T 13-10-2018 Atc_1441 167121a17c3f31b778aece206b97cdd2 611 Gene3D G3DSA:3.40.1750.10 179 491 6.1E-133 T 13-10-2018 Atc_1441 167121a17c3f31b778aece206b97cdd2 611 SUPERFAMILY SSF52096 310 521 5.88E-36 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atc_1441 167121a17c3f31b778aece206b97cdd2 611 Gene3D G3DSA:3.90.226.10 307 534 6.1E-133 T 13-10-2018 Atc_1441 167121a17c3f31b778aece206b97cdd2 611 SUPERFAMILY SSF52096 86 277 3.15E-19 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atc_2158 606031bc8ed0ecb8efefbc4981a32a51 87 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 18 78 13.75 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Atc_2158 606031bc8ed0ecb8efefbc4981a32a51 87 Gene3D G3DSA:1.10.287.1040 12 86 3.3E-20 T 13-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Atc_2158 606031bc8ed0ecb8efefbc4981a32a51 87 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 19 52 5.0E-4 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Atc_2158 606031bc8ed0ecb8efefbc4981a32a51 87 Pfam PF02609 Exonuclease VII small subunit 19 69 7.6E-18 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Atc_2158 606031bc8ed0ecb8efefbc4981a32a51 87 SUPERFAMILY SSF116842 12 79 1.7E-17 T 13-10-2018 Atc_2158 606031bc8ed0ecb8efefbc4981a32a51 87 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 19 72 1.9E-19 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Atc_2158 606031bc8ed0ecb8efefbc4981a32a51 87 PIRSF PIRSF006488 7 86 7.9E-19 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Atc_0584 0c2ab974ed079a15605c8903ffcce1b6 155 SUPERFAMILY SSF52121 9 155 1.44E-59 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_0584 0c2ab974ed079a15605c8903ffcce1b6 155 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 16 151 3.7E-56 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_0584 0c2ab974ed079a15605c8903ffcce1b6 155 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 155 31.29 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_0584 0c2ab974ed079a15605c8903ffcce1b6 155 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 152 2.2E-57 T 13-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_0584 0c2ab974ed079a15605c8903ffcce1b6 155 Gene3D G3DSA:3.40.50.960 5 155 1.5E-60 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_2764 8245f12c96bcef406afb7f09d7d489a6 462 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 458 5.7E-66 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Atc_2764 8245f12c96bcef406afb7f09d7d489a6 462 SUPERFAMILY SSF55103 219 461 5.89E-64 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Atc_2764 8245f12c96bcef406afb7f09d7d489a6 462 SUPERFAMILY SSF56176 6 217 1.59E-64 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atc_2764 8245f12c96bcef406afb7f09d7d489a6 462 Pfam PF01565 FAD binding domain 41 177 2.3E-36 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Atc_2764 8245f12c96bcef406afb7f09d7d489a6 462 Gene3D G3DSA:1.10.45.10 419 458 5.7E-13 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Atc_2764 8245f12c96bcef406afb7f09d7d489a6 462 Gene3D G3DSA:3.30.70.2740 337 418 4.6E-15 T 13-10-2018 Atc_2764 8245f12c96bcef406afb7f09d7d489a6 462 Gene3D G3DSA:3.30.465.40 3 232 8.9E-66 T 13-10-2018 Atc_0628 a61a5e24fb5af2c8360e84d05d08588a 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.1E-53 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0628 a61a5e24fb5af2c8360e84d05d08588a 118 Gene3D G3DSA:1.10.8.50 1 71 1.1E-28 T 13-10-2018 Atc_0628 a61a5e24fb5af2c8360e84d05d08588a 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.0E-32 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0628 a61a5e24fb5af2c8360e84d05d08588a 118 Gene3D G3DSA:4.10.910.10 72 118 8.2E-26 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0628 a61a5e24fb5af2c8360e84d05d08588a 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.835 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0628 a61a5e24fb5af2c8360e84d05d08588a 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0628 a61a5e24fb5af2c8360e84d05d08588a 118 SUPERFAMILY SSF46946 2 113 9.42E-46 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Atc_0628 a61a5e24fb5af2c8360e84d05d08588a 118 PIRSF PIRSF002134 1 118 8.0E-43 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0199 fdfb0545c4e265732f57a3a2739ad45a 321 Gene3D G3DSA:3.40.50.2300 170 321 2.1E-25 T 13-10-2018 Atc_0199 fdfb0545c4e265732f57a3a2739ad45a 321 SUPERFAMILY SSF52172 187 316 5.98E-24 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0199 fdfb0545c4e265732f57a3a2739ad45a 321 Gene3D G3DSA:2.40.50.180 45 160 1.4E-22 T 13-10-2018 Atc_0199 fdfb0545c4e265732f57a3a2739ad45a 321 Gene3D G3DSA:2.30.30.40 36 154 1.4E-22 T 13-10-2018 Atc_0199 fdfb0545c4e265732f57a3a2739ad45a 321 Pfam PF01584 CheW-like domain 21 162 2.3E-30 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atc_0199 fdfb0545c4e265732f57a3a2739ad45a 321 SMART SM00448 186 311 2.6E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0199 fdfb0545c4e265732f57a3a2739ad45a 321 PIRSF PIRSF002867 1 319 2.1E-97 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV Atc_0199 fdfb0545c4e265732f57a3a2739ad45a 321 SUPERFAMILY SSF50341 16 163 3.53E-27 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Atc_0199 fdfb0545c4e265732f57a3a2739ad45a 321 SMART SM00260 17 160 6.5E-19 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atc_0199 fdfb0545c4e265732f57a3a2739ad45a 321 Pfam PF00072 Response regulator receiver domain 188 309 8.4E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_m198 bf8486aadbf062919fc26632fe1fa90c 339 Pfam PF01048 Phosphorylase superfamily 43 144 1.1E-8 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Atc_m198 bf8486aadbf062919fc26632fe1fa90c 339 SUPERFAMILY SSF53167 42 300 7.51E-16 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Atc_m198 bf8486aadbf062919fc26632fe1fa90c 339 Gene3D G3DSA:3.40.50.1580 53 303 6.0E-30 T 13-10-2018 Atc_2310 067fb7735cf98eea695f31b8fe520d60 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_2310 067fb7735cf98eea695f31b8fe520d60 588 Gene3D G3DSA:1.20.1560.10 3 325 2.3E-53 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atc_2310 067fb7735cf98eea695f31b8fe520d60 588 Pfam PF00664 ABC transporter transmembrane region 24 281 1.6E-28 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atc_2310 067fb7735cf98eea695f31b8fe520d60 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 19 555 1.4E-187 T 13-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 Atc_2310 067fb7735cf98eea695f31b8fe520d60 588 Pfam PF00005 ABC transporter 361 514 1.9E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_2310 067fb7735cf98eea695f31b8fe520d60 588 SUPERFAMILY SSF90123 9 325 2.75E-55 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atc_2310 067fb7735cf98eea695f31b8fe520d60 588 SMART SM00382 368 560 2.1E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2310 067fb7735cf98eea695f31b8fe520d60 588 SUPERFAMILY SSF52540 341 582 2.37E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2310 067fb7735cf98eea695f31b8fe520d60 588 Gene3D G3DSA:3.40.50.300 339 588 1.7E-81 T 13-10-2018 Atc_1591 fd6400fa95b2f9df904b13bd59abd4d3 360 Gene3D G3DSA:1.10.287.470 103 162 4.8E-65 T 13-10-2018 Atc_1591 fd6400fa95b2f9df904b13bd59abd4d3 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 269 3.4E-20 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_1591 fd6400fa95b2f9df904b13bd59abd4d3 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 354 1.6E-66 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_1591 fd6400fa95b2f9df904b13bd59abd4d3 360 Gene3D G3DSA:2.40.30.170 55 279 4.8E-65 T 13-10-2018 Atc_1591 fd6400fa95b2f9df904b13bd59abd4d3 360 Gene3D G3DSA:2.40.420.20 280 352 4.8E-65 T 13-10-2018 Atc_1591 fd6400fa95b2f9df904b13bd59abd4d3 360 SUPERFAMILY SSF111369 59 274 2.22E-32 T 13-10-2018 Atc_1591 fd6400fa95b2f9df904b13bd59abd4d3 360 Gene3D G3DSA:2.40.50.100 68 196 4.8E-65 T 13-10-2018 Atc_1248 ca92be2f9269b5104c973fd2f33085fb 385 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 352 370 - T 13-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 Atc_1248 ca92be2f9269b5104c973fd2f33085fb 385 Gene3D G3DSA:3.40.50.150 1 220 2.0E-47 T 13-10-2018 Atc_1248 ca92be2f9269b5104c973fd2f33085fb 385 SUPERFAMILY SSF53335 1 370 1.27E-68 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1248 ca92be2f9269b5104c973fd2f33085fb 385 Gene3D G3DSA:3.90.120.10 309 363 2.1E-11 T 13-10-2018 Atc_1248 ca92be2f9269b5104c973fd2f33085fb 385 Pfam PF00145 C-5 cytosine-specific DNA methylase 317 367 2.6E-11 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Atc_1248 ca92be2f9269b5104c973fd2f33085fb 385 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 199 2.6E-36 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Atc_1248 ca92be2f9269b5104c973fd2f33085fb 385 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 4 366 2.1E-43 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Atc_1248 ca92be2f9269b5104c973fd2f33085fb 385 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 71 83 - T 13-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 Atc_1248 ca92be2f9269b5104c973fd2f33085fb 385 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 179 192 1.4E-14 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Atc_1248 ca92be2f9269b5104c973fd2f33085fb 385 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 109 123 1.4E-14 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Atc_1248 ca92be2f9269b5104c973fd2f33085fb 385 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 1.4E-14 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Atc_2005 d20b65bba73ed703986442d1c7e81d41 242 Gene3D G3DSA:3.40.30.10 91 226 1.5E-23 T 13-10-2018 Atc_2005 d20b65bba73ed703986442d1c7e81d41 242 Pfam PF13098 Thioredoxin-like domain 91 210 3.4E-11 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_2005 d20b65bba73ed703986442d1c7e81d41 242 SUPERFAMILY SSF52833 82 205 4.25E-16 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0731 09c2ff885f46195326e2eee8c15b9c8c 152 SUPERFAMILY SSF88697 1 148 5.97E-56 T 13-10-2018 IPR015947 PUA-like superfamily Atc_0731 09c2ff885f46195326e2eee8c15b9c8c 152 Pfam PF01878 EVE domain 2 147 5.0E-49 T 13-10-2018 IPR002740 EVE domain Atc_0731 09c2ff885f46195326e2eee8c15b9c8c 152 Gene3D G3DSA:3.10.590.10 1 150 1.7E-57 T 13-10-2018 Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 SUPERFAMILY SSF55781 56 191 3.43E-13 T 13-10-2018 Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 Pfam PF13426 PAS domain 216 317 1.0E-17 T 13-10-2018 IPR000014 PAS domain Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 326 490 2.0E-42 T 13-10-2018 IPR000160 GGDEF domain Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 487 6.5E-43 T 13-10-2018 IPR000160 GGDEF domain Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 SUPERFAMILY SSF55785 213 317 9.25E-25 T 13-10-2018 IPR035965 PAS domain superfamily Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 SUPERFAMILY SSF55073 335 490 4.55E-43 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 SMART SM00086 277 319 1.1E-10 T 13-10-2018 IPR001610 PAC motif Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 Gene3D G3DSA:3.30.450.20 203 318 1.0E-30 T 13-10-2018 Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 SMART SM00267 319 491 8.3E-59 T 13-10-2018 IPR000160 GGDEF domain Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 Gene3D G3DSA:3.30.70.270 320 493 4.7E-51 T 13-10-2018 Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 204 325 6.1E-16 T 13-10-2018 IPR000014 PAS domain Atc_1410 38d29ecddccf9fe89caeaa2762a5830b 522 Gene3D G3DSA:3.30.450.40 26 202 1.3E-11 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_1712 526be77e7cdce7403ed29b7cc99ec7f4 219 SUPERFAMILY SSF52402 18 212 1.12E-31 T 13-10-2018 Atc_1712 526be77e7cdce7403ed29b7cc99ec7f4 219 Gene3D G3DSA:3.40.50.620 18 217 3.9E-34 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_1712 526be77e7cdce7403ed29b7cc99ec7f4 219 Pfam PF06508 Queuosine biosynthesis protein QueC 20 207 5.8E-23 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Atc_1558 559d9454b1e070497823cec56bd4e789 670 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 293 1.8E-28 T 13-10-2018 IPR000160 GGDEF domain Atc_1558 559d9454b1e070497823cec56bd4e789 670 Pfam PF00990 Diguanylate cyclase, GGDEF domain 138 290 2.3E-32 T 13-10-2018 IPR000160 GGDEF domain Atc_1558 559d9454b1e070497823cec56bd4e789 670 SUPERFAMILY SSF55073 142 295 1.1E-33 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_1558 559d9454b1e070497823cec56bd4e789 670 Pfam PF00563 EAL domain 313 539 1.3E-51 T 13-10-2018 IPR001633 EAL domain Atc_1558 559d9454b1e070497823cec56bd4e789 670 SMART SM00267 117 295 1.5E-34 T 13-10-2018 IPR000160 GGDEF domain Atc_1558 559d9454b1e070497823cec56bd4e789 670 SMART SM00052 301 544 4.1E-46 T 13-10-2018 IPR001633 EAL domain Atc_1558 559d9454b1e070497823cec56bd4e789 670 SUPERFAMILY SSF55785 31 113 5.52E-5 T 13-10-2018 IPR035965 PAS domain superfamily Atc_1558 559d9454b1e070497823cec56bd4e789 670 SUPERFAMILY SSF141868 312 553 3.27E-60 T 13-10-2018 IPR035919 EAL domain superfamily Atc_1558 559d9454b1e070497823cec56bd4e789 670 Gene3D G3DSA:3.20.20.450 310 556 8.0E-66 T 13-10-2018 IPR035919 EAL domain superfamily Atc_1558 559d9454b1e070497823cec56bd4e789 670 Gene3D G3DSA:3.30.70.270 135 297 1.2E-40 T 13-10-2018 Atc_0237 6383f2471066ad4059697fe80c5cf806 457 SUPERFAMILY SSF52540 192 442 7.39E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0237 6383f2471066ad4059697fe80c5cf806 457 Pfam PF03796 DnaB-like helicase C terminal domain 194 449 6.5E-114 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Atc_0237 6383f2471066ad4059697fe80c5cf806 457 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 17 451 1.6E-173 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Atc_0237 6383f2471066ad4059697fe80c5cf806 457 SMART SM00382 211 408 7.4E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0237 6383f2471066ad4059697fe80c5cf806 457 Pfam PF00772 DnaB-like helicase N terminal domain 16 117 7.0E-34 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Atc_0237 6383f2471066ad4059697fe80c5cf806 457 Gene3D G3DSA:3.40.50.300 177 454 1.6E-106 T 13-10-2018 Atc_0237 6383f2471066ad4059697fe80c5cf806 457 SUPERFAMILY SSF48024 14 125 2.62E-35 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Atc_0237 6383f2471066ad4059697fe80c5cf806 457 Gene3D G3DSA:1.10.860.10 12 175 1.3E-52 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Atc_0939 805146e6c0779bb335ae6ac9646d4688 561 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 111 4.8E-13 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0939 805146e6c0779bb335ae6ac9646d4688 561 Pfam PF00361 Proton-conducting membrane transporter 124 351 1.5E-46 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0939 805146e6c0779bb335ae6ac9646d4688 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 3.1E-27 T 13-10-2018 Atc_0939 805146e6c0779bb335ae6ac9646d4688 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 3.1E-27 T 13-10-2018 Atc_0939 805146e6c0779bb335ae6ac9646d4688 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 148 169 3.1E-27 T 13-10-2018 Atc_0939 805146e6c0779bb335ae6ac9646d4688 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 3.1E-27 T 13-10-2018 Atc_0939 805146e6c0779bb335ae6ac9646d4688 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 101 121 3.1E-27 T 13-10-2018 Atc_0939 805146e6c0779bb335ae6ac9646d4688 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 3.1E-27 T 13-10-2018 Atc_1709 8f8e67cfbcc72a9b89bd240c5823dc5e 404 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 180 9.9E-53 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Atc_1709 8f8e67cfbcc72a9b89bd240c5823dc5e 404 Gene3D G3DSA:1.10.240.10 259 362 4.6E-39 T 13-10-2018 Atc_1709 8f8e67cfbcc72a9b89bd240c5823dc5e 404 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_1709 8f8e67cfbcc72a9b89bd240c5823dc5e 404 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 2.0E-20 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Atc_1709 8f8e67cfbcc72a9b89bd240c5823dc5e 404 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 2.0E-20 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Atc_1709 8f8e67cfbcc72a9b89bd240c5823dc5e 404 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 2.0E-20 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Atc_1709 8f8e67cfbcc72a9b89bd240c5823dc5e 404 Pfam PF00579 tRNA synthetases class I (W and Y) 4 167 1.7E-44 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_1709 8f8e67cfbcc72a9b89bd240c5823dc5e 404 Pfam PF00579 tRNA synthetases class I (W and Y) 235 347 3.9E-10 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_1709 8f8e67cfbcc72a9b89bd240c5823dc5e 404 SUPERFAMILY SSF52374 4 396 2.29E-82 T 13-10-2018 Atc_1709 8f8e67cfbcc72a9b89bd240c5823dc5e 404 Gene3D G3DSA:3.40.50.620 3 226 7.1E-71 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0077 f2d566b7967b3280b88fdf4183d0b6fd 219 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 214 8.2E-96 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Atc_0077 f2d566b7967b3280b88fdf4183d0b6fd 219 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 202 4.0E-90 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Atc_0077 f2d566b7967b3280b88fdf4183d0b6fd 219 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Atc_0077 f2d566b7967b3280b88fdf4183d0b6fd 219 Gene3D G3DSA:3.20.20.70 4 218 6.9E-85 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0077 f2d566b7967b3280b88fdf4183d0b6fd 219 SUPERFAMILY SSF51366 1 215 5.11E-78 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atc_0077 f2d566b7967b3280b88fdf4183d0b6fd 219 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Atc_0077 f2d566b7967b3280b88fdf4183d0b6fd 219 PIRSF PIRSF001461 1 219 3.9E-102 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Atc_0664 502359075494668ae38e5b02fe082435 584 Gene3D G3DSA:3.30.450.330 224 549 1.7E-88 T 13-10-2018 Atc_0664 502359075494668ae38e5b02fe082435 584 SUPERFAMILY SSF56519 56 222 1.83E-35 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Atc_0664 502359075494668ae38e5b02fe082435 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 207 4.3E-13 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Atc_0664 502359075494668ae38e5b02fe082435 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 248 544 2.8E-61 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atc_0664 502359075494668ae38e5b02fe082435 584 SUPERFAMILY SSF56601 174 561 4.73E-84 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_0664 502359075494668ae38e5b02fe082435 584 Gene3D G3DSA:3.90.1310.30 52 222 5.0E-38 T 13-10-2018 Atc_0664 502359075494668ae38e5b02fe082435 584 Gene3D G3DSA:3.40.710.10 285 465 1.7E-88 T 13-10-2018 Atc_0119 71d28b7c44927c824a0910dca465443b 224 Gene3D G3DSA:2.40.128.130 75 219 3.2E-6 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Atc_0119 71d28b7c44927c824a0910dca465443b 224 SUPERFAMILY SSF103515 28 201 9.94E-5 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Atc_0306 2fc6b458ce41037385cf0bc110ed7576 229 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 141 156 - T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Atc_0306 2fc6b458ce41037385cf0bc110ed7576 229 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 15 217 1.6E-54 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Atc_0306 2fc6b458ce41037385cf0bc110ed7576 229 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 12 220 32.363 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Atc_0306 2fc6b458ce41037385cf0bc110ed7576 229 SUPERFAMILY SSF53335 26 215 2.46E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0306 2fc6b458ce41037385cf0bc110ed7576 229 Gene3D G3DSA:3.40.50.150 9 224 5.5E-66 T 13-10-2018 Atc_0306 2fc6b458ce41037385cf0bc110ed7576 229 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 18 215 3.4E-50 T 13-10-2018 Atc_2832 6cc2381fbeb4a00119a63640e1c63752 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 42 2.6E-24 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2832 6cc2381fbeb4a00119a63640e1c63752 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.201 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2832 6cc2381fbeb4a00119a63640e1c63752 44 Pfam PF00468 Ribosomal protein L34 1 43 3.1E-23 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2832 6cc2381fbeb4a00119a63640e1c63752 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 13-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_2832 6cc2381fbeb4a00119a63640e1c63752 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 24 7.0E-6 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0350 72900213e1fda61c9dd875989b925234 264 Pfam PF00977 Histidine biosynthesis protein 5 233 5.7E-91 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Atc_0350 72900213e1fda61c9dd875989b925234 264 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 250 47.638 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Atc_0350 72900213e1fda61c9dd875989b925234 264 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 250 1.2E-109 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Atc_0350 72900213e1fda61c9dd875989b925234 264 Gene3D G3DSA:3.20.20.70 1 261 1.6E-110 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0350 72900213e1fda61c9dd875989b925234 264 SUPERFAMILY SSF51366 1 250 8.63E-84 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atc_0253 f411bd54ccf6b597faba0cb6e356b3aa 147 SUPERFAMILY SSF51316 18 141 8.72E-53 T 13-10-2018 IPR011057 Mss4-like superfamily Atc_0253 f411bd54ccf6b597faba0cb6e356b3aa 147 Pfam PF01641 SelR domain 23 139 3.8E-45 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Atc_0253 f411bd54ccf6b597faba0cb6e356b3aa 147 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 13 140 35.756 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Atc_0253 f411bd54ccf6b597faba0cb6e356b3aa 147 Gene3D G3DSA:2.170.150.20 14 147 7.5E-53 T 13-10-2018 Atc_0253 f411bd54ccf6b597faba0cb6e356b3aa 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 20 141 1.2E-48 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Atc_2869 59da5819766f5569d127fe64932b0cbc 69 SUPERFAMILY SSF46689 3 68 3.54E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_2869 59da5819766f5569d127fe64932b0cbc 69 Pfam PF02954 Bacterial regulatory protein, Fis family 25 65 1.1E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_2869 59da5819766f5569d127fe64932b0cbc 69 Gene3D G3DSA:1.10.10.60 1 68 2.5E-18 T 13-10-2018 Atc_2869 59da5819766f5569d127fe64932b0cbc 69 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 31 48 5.1E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_2869 59da5819766f5569d127fe64932b0cbc 69 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 48 68 5.1E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_0818 677fc95ab1307936917d90c0e405f642 438 Pfam PF00696 Amino acid kinase family 24 228 2.0E-25 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Atc_0818 677fc95ab1307936917d90c0e405f642 438 Gene3D G3DSA:3.40.1160.10 4 287 3.6E-86 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_0818 677fc95ab1307936917d90c0e405f642 438 PIRSF PIRSF000423 1 435 7.6E-168 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Atc_0818 677fc95ab1307936917d90c0e405f642 438 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 435 180.945 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Atc_0818 677fc95ab1307936917d90c0e405f642 438 Pfam PF00583 Acetyltransferase (GNAT) family 321 397 2.2E-10 T 13-10-2018 IPR000182 GNAT domain Atc_0818 677fc95ab1307936917d90c0e405f642 438 SUPERFAMILY SSF53633 5 287 2.09E-66 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_0818 677fc95ab1307936917d90c0e405f642 438 Gene3D G3DSA:3.40.630.30 288 435 5.1E-39 T 13-10-2018 Atc_0818 677fc95ab1307936917d90c0e405f642 438 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 6 434 1.7E-153 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Atc_0818 677fc95ab1307936917d90c0e405f642 438 SUPERFAMILY SSF55729 265 404 2.36E-21 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atc_0146 41b86ae73ce50eac0f5809cc86e3a177 525 Pfam PF03814 Potassium-transporting ATPase A subunit 1 513 5.2E-164 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atc_0146 41b86ae73ce50eac0f5809cc86e3a177 525 PIRSF PIRSF001294 1 518 1.5E-159 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atc_0146 41b86ae73ce50eac0f5809cc86e3a177 525 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 515 1.1E-143 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 SUPERFAMILY SSF55186 64 239 8.24E-67 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 Pfam PF03129 Anticodon binding domain 542 631 1.4E-19 T 13-10-2018 IPR004154 Anticodon-binding Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 Gene3D G3DSA:3.30.54.20 130 186 2.7E-65 T 13-10-2018 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 SUPERFAMILY SSF55681 242 527 1.08E-94 T 13-10-2018 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 Gene3D G3DSA:3.10.20.30 3 62 2.1E-19 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 Gene3D G3DSA:3.40.50.800 533 643 1.5E-29 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 Gene3D G3DSA:3.30.930.10 222 532 9.6E-124 T 13-10-2018 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 SMART SM00863 169 218 1.1E-25 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 2.1E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 2.1E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 2.1E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 2.1E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 2.1E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 323 530 7.6E-42 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 5.5E-219 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 SUPERFAMILY SSF81271 4 61 1.18E-13 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 Pfam PF02824 TGS domain 5 61 6.8E-8 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 218 7.8E-16 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 Gene3D G3DSA:3.30.980.10 69 221 2.7E-65 T 13-10-2018 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 635 34.261 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atc_2553 f1b3b81acd56098fce00d3a6818271b1 644 SUPERFAMILY SSF52954 530 639 3.02E-29 T 13-10-2018 Atc_2193 2808afcb5ce616283aaadceab0b523ee 592 SMART SM00382 367 549 4.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2193 2808afcb5ce616283aaadceab0b523ee 592 SMART SM00382 39 266 1.8E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2193 2808afcb5ce616283aaadceab0b523ee 592 SUPERFAMILY SSF52540 337 563 1.49E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2193 2808afcb5ce616283aaadceab0b523ee 592 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_2193 2808afcb5ce616283aaadceab0b523ee 592 Pfam PF00005 ABC transporter 359 502 1.5E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_2193 2808afcb5ce616283aaadceab0b523ee 592 Gene3D G3DSA:3.40.50.300 2 236 1.4E-59 T 13-10-2018 Atc_2193 2808afcb5ce616283aaadceab0b523ee 592 Gene3D G3DSA:3.40.50.300 331 576 2.7E-65 T 13-10-2018 Atc_2193 2808afcb5ce616283aaadceab0b523ee 592 SUPERFAMILY SSF52540 11 232 2.08E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2193 2808afcb5ce616283aaadceab0b523ee 592 Pfam PF00005 ABC transporter 30 173 1.9E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0568 c837d79130550369d2f26149ad599a71 85 Pfam PF00886 Ribosomal protein S16 8 66 3.8E-28 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0568 c837d79130550369d2f26149ad599a71 85 Gene3D G3DSA:3.30.1320.10 1 84 1.5E-35 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0568 c837d79130550369d2f26149ad599a71 85 SUPERFAMILY SSF54565 1 78 3.4E-34 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0568 c837d79130550369d2f26149ad599a71 85 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 2.1E-33 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0568 c837d79130550369d2f26149ad599a71 85 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 76 25.529 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_1520 2dcca219f80a2bfbdb56b3a04f9992d9 178 Pfam PF01814 Hemerythrin HHE cation binding domain 14 149 6.6E-13 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Atc_1520 2dcca219f80a2bfbdb56b3a04f9992d9 178 Gene3D G3DSA:1.20.120.520 1 170 1.5E-34 T 13-10-2018 Atc_1894 e3aeb1fff007953260f3237056f4ae51 317 Pfam PF03773 Predicted permease 19 312 2.4E-41 T 13-10-2018 IPR005524 Predicted permease DUF318 Atc_0559 e3aeb1fff007953260f3237056f4ae51 317 Pfam PF03773 Predicted permease 19 312 2.4E-41 T 13-10-2018 IPR005524 Predicted permease DUF318 Atc_1533 4cef89ce8b432d9eb0465e5bfdda63fb 322 Gene3D G3DSA:3.40.1190.20 12 321 1.3E-82 T 13-10-2018 IPR029056 Ribokinase-like Atc_1533 4cef89ce8b432d9eb0465e5bfdda63fb 322 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Atc_1533 4cef89ce8b432d9eb0465e5bfdda63fb 322 Pfam PF00294 pfkB family carbohydrate kinase 20 302 1.8E-39 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Atc_1533 4cef89ce8b432d9eb0465e5bfdda63fb 322 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 14 318 1.6E-83 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Atc_1533 4cef89ce8b432d9eb0465e5bfdda63fb 322 SUPERFAMILY SSF53613 15 302 2.96E-54 T 13-10-2018 IPR029056 Ribokinase-like Atc_1533 4cef89ce8b432d9eb0465e5bfdda63fb 322 PIRSF PIRSF000535 11 320 9.1E-76 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Atc_0195 0e60a0e7404943453049023b04290687 661 SUPERFAMILY SSF55874 339 521 4.32E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0195 0e60a0e7404943453049023b04290687 661 Gene3D G3DSA:2.30.30.40 523 646 6.1E-21 T 13-10-2018 Atc_0195 0e60a0e7404943453049023b04290687 661 Pfam PF01627 Hpt domain 6 105 4.9E-15 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Atc_0195 0e60a0e7404943453049023b04290687 661 Gene3D G3DSA:1.10.287.560 273 335 1.5E-11 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Atc_0195 0e60a0e7404943453049023b04290687 661 SUPERFAMILY SSF47384 274 336 2.31E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_0195 0e60a0e7404943453049023b04290687 661 SUPERFAMILY SSF50341 522 650 3.01E-14 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Atc_0195 0e60a0e7404943453049023b04290687 661 Gene3D G3DSA:1.20.120.160 3 142 6.5E-32 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Atc_0195 0e60a0e7404943453049023b04290687 661 SMART SM00387 380 523 1.3E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0195 0e60a0e7404943453049023b04290687 661 SMART SM01231 273 335 2.1E-11 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Atc_0195 0e60a0e7404943453049023b04290687 661 Pfam PF01584 CheW-like domain 528 652 9.2E-12 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atc_0195 0e60a0e7404943453049023b04290687 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 439 2.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0195 0e60a0e7404943453049023b04290687 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 520 2.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0195 0e60a0e7404943453049023b04290687 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 477 2.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0195 0e60a0e7404943453049023b04290687 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 501 2.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0195 0e60a0e7404943453049023b04290687 661 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 383 522 2.6E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0195 0e60a0e7404943453049023b04290687 661 Gene3D G3DSA:2.40.50.180 546 606 6.1E-21 T 13-10-2018 Atc_0195 0e60a0e7404943453049023b04290687 661 Gene3D G3DSA:3.30.565.10 336 522 2.2E-53 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0195 0e60a0e7404943453049023b04290687 661 SMART SM00073 4 101 2.2E-21 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Atc_0195 0e60a0e7404943453049023b04290687 661 SMART SM00260 515 650 3.1E-11 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atc_0195 0e60a0e7404943453049023b04290687 661 SUPERFAMILY SSF47226 4 125 6.15E-29 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Atc_0195 0e60a0e7404943453049023b04290687 661 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 274 334 1.1E-9 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Atc_0676 bbf5b31028e0fbd35baa14f7d3fd76ac 239 PRINTS PR01217 Proline rich extensin signature 55 67 2.5E-11 T 13-10-2018 Atc_0676 bbf5b31028e0fbd35baa14f7d3fd76ac 239 PRINTS PR01217 Proline rich extensin signature 106 123 2.5E-11 T 13-10-2018 Atc_0676 bbf5b31028e0fbd35baa14f7d3fd76ac 239 PRINTS PR01217 Proline rich extensin signature 67 88 2.5E-11 T 13-10-2018 Atc_0676 bbf5b31028e0fbd35baa14f7d3fd76ac 239 PRINTS PR01217 Proline rich extensin signature 89 105 2.5E-11 T 13-10-2018 Atc_0676 bbf5b31028e0fbd35baa14f7d3fd76ac 239 SUPERFAMILY SSF74653 158 234 4.71E-11 T 13-10-2018 Atc_0676 bbf5b31028e0fbd35baa14f7d3fd76ac 239 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 160 236 6.2E-14 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Atc_0676 bbf5b31028e0fbd35baa14f7d3fd76ac 239 Gene3D G3DSA:3.30.1150.10 117 238 1.8E-21 T 13-10-2018 Atc_0676 bbf5b31028e0fbd35baa14f7d3fd76ac 239 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 162 236 9.5E-13 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Atc_0982 3622366c2570345c8b82264af63d049a 204 Pfam PF16925 Bacterial transcriptional repressor C-terminal 87 181 6.6E-13 T 13-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Atc_0982 3622366c2570345c8b82264af63d049a 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 5.3E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atc_0982 3622366c2570345c8b82264af63d049a 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.3E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atc_0982 3622366c2570345c8b82264af63d049a 204 Gene3D G3DSA:1.10.357.10 13 199 1.8E-45 T 13-10-2018 Atc_0982 3622366c2570345c8b82264af63d049a 204 SUPERFAMILY SSF48498 85 199 1.31E-20 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atc_0982 3622366c2570345c8b82264af63d049a 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Atc_0982 3622366c2570345c8b82264af63d049a 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 2.5E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atc_0982 3622366c2570345c8b82264af63d049a 204 SUPERFAMILY SSF46689 6 87 3.13E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_1154 4547d58eb8348d200ba1088d8054a030 202 Gene3D G3DSA:3.40.470.10 1 198 1.9E-38 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_1154 4547d58eb8348d200ba1088d8054a030 202 SMART SM00986 22 188 7.9E-18 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_1154 4547d58eb8348d200ba1088d8054a030 202 SUPERFAMILY SSF52141 3 178 1.93E-31 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_1154 4547d58eb8348d200ba1088d8054a030 202 SMART SM00987 22 188 7.9E-18 T 13-10-2018 Atc_1154 4547d58eb8348d200ba1088d8054a030 202 Pfam PF03167 Uracil DNA glycosylase superfamily 28 178 1.1E-28 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_1551 72462453f8575473a40d8502f90e2759 541 SUPERFAMILY SSF55073 383 537 3.69E-44 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_1551 72462453f8575473a40d8502f90e2759 541 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 379 537 2.8E-44 T 13-10-2018 IPR000160 GGDEF domain Atc_1551 72462453f8575473a40d8502f90e2759 541 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 534 1.6E-41 T 13-10-2018 IPR000160 GGDEF domain Atc_1551 72462453f8575473a40d8502f90e2759 541 Gene3D G3DSA:3.30.70.270 373 540 2.9E-51 T 13-10-2018 Atc_1551 72462453f8575473a40d8502f90e2759 541 SMART SM00267 367 538 1.5E-51 T 13-10-2018 IPR000160 GGDEF domain Atc_0857 828472ad962b3e78e6a1cbf721b8580a 168 SUPERFAMILY SSF53098 1 164 2.28E-44 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_0857 828472ad962b3e78e6a1cbf721b8580a 168 Pfam PF01351 Ribonuclease HII 14 160 1.8E-18 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain Atc_0857 828472ad962b3e78e6a1cbf721b8580a 168 Gene3D G3DSA:3.30.420.10 1 168 1.0E-48 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 5.3E-23 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 SMART SM00841 130 185 5.0E-32 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 PIRSF PIRSF005901 1 186 1.9E-68 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 Hamap MF_00141 Elongation factor P [efp]. 2 186 45.425 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 1.7E-18 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.7E-25 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 SUPERFAMILY SSF50249 66 127 1.33E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 Gene3D G3DSA:2.40.50.140 65 128 2.7E-22 T 13-10-2018 Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 SUPERFAMILY SSF50249 130 186 2.4E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 TIGRFAM TIGR00038 efp: translation elongation factor P 4 186 4.4E-75 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 Gene3D G3DSA:2.30.30.30 3 64 4.1E-23 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 Gene3D G3DSA:2.40.50.140 129 186 1.0E-24 T 13-10-2018 Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 SUPERFAMILY SSF50104 3 64 5.42E-18 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Atc_1824 1dbd055d354c43b228b0d81f847e33f3 186 SMART SM01185 68 122 6.5E-22 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Atc_2220 e23182c7d39d1853275a2c6986705295 211 SUPERFAMILY SSF81452 23 208 3.66E-38 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2220 e23182c7d39d1853275a2c6986705295 211 Pfam PF00510 Cytochrome c oxidase subunit III 27 209 2.8E-15 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2220 e23182c7d39d1853275a2c6986705295 211 Gene3D G3DSA:1.20.120.80 23 210 1.6E-38 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_m240 c15b425a89b48541938d59447d211804 331 Gene3D G3DSA:1.10.10.2830 148 249 1.3E-7 T 13-10-2018 Atc_m240 c15b425a89b48541938d59447d211804 331 Pfam PF02195 ParB-like nuclease domain 45 132 9.9E-12 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_m240 c15b425a89b48541938d59447d211804 331 Gene3D G3DSA:3.90.1530.30 56 125 2.1E-10 T 13-10-2018 Atc_m240 c15b425a89b48541938d59447d211804 331 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 45 218 4.4E-23 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Atc_m240 c15b425a89b48541938d59447d211804 331 SUPERFAMILY SSF109709 134 246 5.23E-10 T 13-10-2018 Atc_m240 c15b425a89b48541938d59447d211804 331 SUPERFAMILY SSF110849 42 161 2.44E-16 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atc_m240 c15b425a89b48541938d59447d211804 331 SMART SM00470 43 141 3.9E-6 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_1244 7080c57615fd71fb8fc4c34ce1971fbe 581 Pfam PF11843 Protein of unknown function (DUF3363) 296 419 8.0E-15 T 13-10-2018 IPR021795 Protein of unknown function DUF3363 Atc_2p03 5799ea7ab268d164af299549d6f0fc17 112 Gene3D G3DSA:4.10.520.10 1 94 2.8E-30 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_2p03 5799ea7ab268d164af299549d6f0fc17 112 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.0E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2p03 5799ea7ab268d164af299549d6f0fc17 112 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.0E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2p03 5799ea7ab268d164af299549d6f0fc17 112 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.0E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2p03 5799ea7ab268d164af299549d6f0fc17 112 Pfam PF00216 Bacterial DNA-binding protein 3 90 4.6E-26 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2p03 5799ea7ab268d164af299549d6f0fc17 112 SUPERFAMILY SSF47729 3 92 4.56E-26 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_2p03 5799ea7ab268d164af299549d6f0fc17 112 SMART SM00411 3 92 5.0E-32 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2p03 5799ea7ab268d164af299549d6f0fc17 112 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Atc_1019 dbed387d58e84da96850e5a351d35a8a 252 ProSitePatterns PS00770 Aminotransferases class-IV signature. 147 176 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Atc_1019 dbed387d58e84da96850e5a351d35a8a 252 Gene3D G3DSA:3.30.470.10 1 80 2.7E-8 T 13-10-2018 Atc_1019 dbed387d58e84da96850e5a351d35a8a 252 Gene3D G3DSA:3.20.10.10 88 244 4.1E-39 T 13-10-2018 Atc_1019 dbed387d58e84da96850e5a351d35a8a 252 Pfam PF01063 Amino-transferase class IV 1 220 2.2E-31 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Atc_1019 dbed387d58e84da96850e5a351d35a8a 252 SUPERFAMILY SSF56752 1 237 1.44E-44 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Atc_2120 dbf0bc9314b5f84b6fe2caa8a59952af 342 PIRSF PIRSF000355 2 342 5.9E-130 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2120 dbf0bc9314b5f84b6fe2caa8a59952af 342 Gene3D G3DSA:1.10.620.20 2 335 5.1E-110 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Atc_2120 dbf0bc9314b5f84b6fe2caa8a59952af 342 SUPERFAMILY SSF47240 3 313 1.1E-93 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_2120 dbf0bc9314b5f84b6fe2caa8a59952af 342 Pfam PF00268 Ribonucleotide reductase, small chain 22 304 1.4E-80 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2207 b5c338707160787d3cd08b7547c4bdd5 565 SUPERFAMILY SSF52374 163 372 1.16E-59 T 13-10-2018 Atc_2207 b5c338707160787d3cd08b7547c4bdd5 565 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 377 552 33.68 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Atc_2207 b5c338707160787d3cd08b7547c4bdd5 565 Pfam PF01583 Adenylylsulphate kinase 378 533 3.2E-61 T 13-10-2018 Atc_2207 b5c338707160787d3cd08b7547c4bdd5 565 Gene3D G3DSA:3.40.50.620 163 376 1.6E-70 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2207 b5c338707160787d3cd08b7547c4bdd5 565 SUPERFAMILY SSF52540 377 551 9.87E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2207 b5c338707160787d3cd08b7547c4bdd5 565 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 375 539 1.1E-60 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Atc_2207 b5c338707160787d3cd08b7547c4bdd5 565 Pfam PF01747 ATP-sulfurylase 163 370 3.6E-69 T 13-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Atc_2207 b5c338707160787d3cd08b7547c4bdd5 565 Pfam PF14306 PUA-like domain 19 141 3.1E-33 T 13-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Atc_2207 b5c338707160787d3cd08b7547c4bdd5 565 Gene3D G3DSA:3.10.400.10 4 143 6.0E-37 T 13-10-2018 Atc_2207 b5c338707160787d3cd08b7547c4bdd5 565 SUPERFAMILY SSF88697 18 144 1.39E-31 T 13-10-2018 IPR015947 PUA-like superfamily Atc_2207 b5c338707160787d3cd08b7547c4bdd5 565 Gene3D G3DSA:3.40.50.300 377 561 5.0E-64 T 13-10-2018 Atc_2483 3f8ba98a635f98d76f75222a2c0ca53b 355 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 353 24.908 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2483 3f8ba98a635f98d76f75222a2c0ca53b 355 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 13 169 8.1E-36 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2483 3f8ba98a635f98d76f75222a2c0ca53b 355 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 183 345 9.1E-17 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2483 3f8ba98a635f98d76f75222a2c0ca53b 355 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 13-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 Atc_2483 3f8ba98a635f98d76f75222a2c0ca53b 355 SUPERFAMILY SSF55120 14 347 5.61E-80 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2483 3f8ba98a635f98d76f75222a2c0ca53b 355 Gene3D G3DSA:3.30.2350.20 18 347 2.7E-103 T 13-10-2018 Atc_2483 3f8ba98a635f98d76f75222a2c0ca53b 355 Gene3D G3DSA:3.30.2340.10 168 312 2.7E-103 T 13-10-2018 Atc_2414 2298f214e0dffeec7cb67964febbdc2f 489 Gene3D G3DSA:3.30.70.2740 341 421 1.2E-8 T 13-10-2018 Atc_2414 2298f214e0dffeec7cb67964febbdc2f 489 Gene3D G3DSA:1.10.45.10 422 462 8.3E-9 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Atc_2414 2298f214e0dffeec7cb67964febbdc2f 489 SUPERFAMILY SSF56176 11 221 7.01E-63 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atc_2414 2298f214e0dffeec7cb67964febbdc2f 489 Gene3D G3DSA:3.30.43.10 1 98 9.1E-25 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Atc_2414 2298f214e0dffeec7cb67964febbdc2f 489 Gene3D G3DSA:3.30.465.10 102 219 7.2E-29 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atc_2414 2298f214e0dffeec7cb67964febbdc2f 489 Pfam PF01565 FAD binding domain 46 184 4.4E-35 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Atc_2414 2298f214e0dffeec7cb67964febbdc2f 489 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 460 3.6E-68 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Atc_2414 2298f214e0dffeec7cb67964febbdc2f 489 SUPERFAMILY SSF55103 194 463 3.43E-69 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Atc_1075 f824f4fbd266aaed80f21339415743fa 100 Pfam PF07681 DoxX 20 94 7.5E-14 T 13-10-2018 IPR032808 DoxX family Atc_1745 3c393395188da90d75904eb9b45e5147 92 Pfam PF00462 Glutaredoxin 7 67 4.0E-18 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Atc_1745 3c393395188da90d75904eb9b45e5147 92 SUPERFAMILY SSF52833 3 90 4.98E-25 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1745 3c393395188da90d75904eb9b45e5147 92 ProSitePatterns PS00195 Glutaredoxin active site. 9 25 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Atc_1745 3c393395188da90d75904eb9b45e5147 92 PRINTS PR00160 Glutaredoxin signature 7 25 7.9E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup Atc_1745 3c393395188da90d75904eb9b45e5147 92 PRINTS PR00160 Glutaredoxin signature 64 77 7.9E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup Atc_1745 3c393395188da90d75904eb9b45e5147 92 PRINTS PR00160 Glutaredoxin signature 50 63 7.9E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup Atc_1745 3c393395188da90d75904eb9b45e5147 92 Gene3D G3DSA:3.40.30.10 4 87 1.6E-25 T 13-10-2018 Atc_1745 3c393395188da90d75904eb9b45e5147 92 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 7 86 2.4E-32 T 13-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 Atc_2702 be9874d79e891d4c351c087cba2535ed 280 Pfam PF01564 Spermine/spermidine synthase domain 62 237 4.4E-47 T 13-10-2018 Atc_2702 be9874d79e891d4c351c087cba2535ed 280 Pfam PF17284 Spermidine synthase tetramerisation domain 5 57 2.4E-17 T 13-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Atc_2702 be9874d79e891d4c351c087cba2535ed 280 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 5 280 35.995 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Atc_2702 be9874d79e891d4c351c087cba2535ed 280 Gene3D G3DSA:2.30.140.10 1 55 6.0E-20 T 13-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Atc_2702 be9874d79e891d4c351c087cba2535ed 280 TIGRFAM TIGR00417 speE: spermidine synthase 6 275 1.4E-79 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Atc_2702 be9874d79e891d4c351c087cba2535ed 280 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 82 95 - T 13-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Atc_2702 be9874d79e891d4c351c087cba2535ed 280 Gene3D G3DSA:3.40.50.150 60 278 7.2E-62 T 13-10-2018 Atc_2702 be9874d79e891d4c351c087cba2535ed 280 SUPERFAMILY SSF53335 4 276 2.0E-74 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0893 d04be87592e12b1bd2bb61de20df6ff6 128 Gene3D G3DSA:3.40.50.1010 2 124 2.2E-8 T 13-10-2018 Atc_0893 d04be87592e12b1bd2bb61de20df6ff6 128 Pfam PF01850 PIN domain 5 119 4.8E-9 T 13-10-2018 IPR002716 PIN domain Atc_0893 d04be87592e12b1bd2bb61de20df6ff6 128 SUPERFAMILY SSF88723 5 124 1.15E-17 T 13-10-2018 IPR029060 PIN-like domain superfamily Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 Gene3D G3DSA:1.20.120.640 311 463 2.9E-41 T 13-10-2018 Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 Gene3D G3DSA:3.40.50.620 1 310 6.9E-122 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 67 76 1.2E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 228 249 1.2E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 197 215 1.2E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 31 42 1.2E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 Pfam PF09190 DALR domain 347 407 3.4E-19 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 24 318 7.1E-124 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 SUPERFAMILY SSF47323 321 462 3.27E-34 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 8 464 37.652 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 9 463 8.5E-157 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 SUPERFAMILY SSF52374 9 318 1.61E-94 T 13-10-2018 Atc_1429 7c7d12d0629eff84541a0f2cd210634a 471 SMART SM00840 347 407 4.0E-25 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 8 629 9.1E-202 T 13-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 Pfam PF00271 Helicase conserved C-terminal domain 446 556 2.3E-16 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 Gene3D G3DSA:3.40.50.300 426 598 6.5E-51 T 13-10-2018 Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 Gene3D G3DSA:3.40.50.300 191 419 2.5E-78 T 13-10-2018 Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 SUPERFAMILY SSF50249 2 153 6.0E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 Gene3D G3DSA:2.40.50.140 27 120 3.1E-8 T 13-10-2018 Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 SMART SM00490 474 557 3.1E-20 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 SMART SM00490 308 376 0.21 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 SUPERFAMILY SSF52540 363 568 1.36E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 Pfam PF00270 DEAD/DEAH box helicase 263 399 2.8E-16 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 SUPERFAMILY SSF52540 190 422 3.66E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 Pfam PF17191 RecG wedge domain 4 145 4.4E-7 T 13-10-2018 IPR033454 RecG, wedge domain Atc_1964 cb378eaa77bc8db633b2c79e2390b70d 662 SMART SM00487 238 428 2.0E-36 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_0329 4cd161c980ceaa7f247400291faf9b2e 139 Gene3D G3DSA:3.40.250.10 1 130 1.7E-30 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Atc_0329 4cd161c980ceaa7f247400291faf9b2e 139 SMART SM00450 23 127 2.8E-21 T 13-10-2018 IPR001763 Rhodanese-like domain Atc_0329 4cd161c980ceaa7f247400291faf9b2e 139 Pfam PF00581 Rhodanese-like domain 35 123 8.2E-17 T 13-10-2018 IPR001763 Rhodanese-like domain Atc_0329 4cd161c980ceaa7f247400291faf9b2e 139 SUPERFAMILY SSF52821 11 132 6.81E-31 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Atc_2847 3bfd7d8cb4f1edc5e40443f09ce820ca 529 Pfam PF07690 Major Facilitator Superfamily 30 420 3.4E-25 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_2847 3bfd7d8cb4f1edc5e40443f09ce820ca 529 Gene3D G3DSA:1.20.1720.10 25 208 9.8E-20 T 13-10-2018 Atc_2847 3bfd7d8cb4f1edc5e40443f09ce820ca 529 SUPERFAMILY SSF103473 22 497 1.83E-35 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_2847 3bfd7d8cb4f1edc5e40443f09ce820ca 529 Gene3D G3DSA:1.20.1250.20 209 439 7.8E-11 T 13-10-2018 Atc_2780 0e444afd008c42847184c5792d01dd9e 270 SUPERFAMILY SSF47240 71 211 5.17E-15 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_2780 0e444afd008c42847184c5792d01dd9e 270 Pfam PF04305 Protein of unknown function (DUF455) 12 253 2.2E-89 T 13-10-2018 IPR007402 Protein of unknown function DUF455 Atc_2780 0e444afd008c42847184c5792d01dd9e 270 Gene3D G3DSA:1.20.1260.10 70 224 3.9E-5 T 13-10-2018 IPR012347 Ferritin-like Atc_2780 0e444afd008c42847184c5792d01dd9e 270 PIRSF PIRSF012318 2 268 4.8E-84 T 13-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 Atc_2451 9813add6858bd98d328ed0a50c5c6266 388 Gene3D G3DSA:3.40.640.10 46 293 2.3E-139 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_2451 9813add6858bd98d328ed0a50c5c6266 388 SUPERFAMILY SSF53383 4 385 3.09E-123 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_2451 9813add6858bd98d328ed0a50c5c6266 388 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 210 248 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_2451 9813add6858bd98d328ed0a50c5c6266 388 Pfam PF00202 Aminotransferase class-III 9 383 7.8E-109 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_2451 9813add6858bd98d328ed0a50c5c6266 388 PIRSF PIRSF000521 3 144 4.9E-13 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_2451 9813add6858bd98d328ed0a50c5c6266 388 PIRSF PIRSF000521 160 387 1.3E-33 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_2451 9813add6858bd98d328ed0a50c5c6266 388 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 3 384 9.5E-139 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Atc_2451 9813add6858bd98d328ed0a50c5c6266 388 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 2 387 69.452 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Atc_2451 9813add6858bd98d328ed0a50c5c6266 388 Gene3D G3DSA:3.90.1150.10 11 375 2.3E-139 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_1760 01658a203b430cf25bd8e291aae8db34 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 498 2.1E-181 T 13-10-2018 IPR004482 Mg chelatase-related protein Atc_1760 01658a203b430cf25bd8e291aae8db34 506 Gene3D G3DSA:3.40.50.300 195 503 1.4E-59 T 13-10-2018 Atc_1760 01658a203b430cf25bd8e291aae8db34 506 Gene3D G3DSA:3.30.230.10 3 168 1.0E-8 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atc_1760 01658a203b430cf25bd8e291aae8db34 506 SUPERFAMILY SSF52540 195 500 6.95E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1760 01658a203b430cf25bd8e291aae8db34 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 408 498 1.9E-26 T 13-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Atc_1760 01658a203b430cf25bd8e291aae8db34 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 195 398 2.6E-96 T 13-10-2018 IPR000523 Magnesium chelatase ChlI domain Atc_1760 01658a203b430cf25bd8e291aae8db34 506 SUPERFAMILY SSF54211 11 169 7.21E-31 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_1760 01658a203b430cf25bd8e291aae8db34 506 SMART SM00382 215 396 3.0E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1760 01658a203b430cf25bd8e291aae8db34 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 5.3E-44 T 13-10-2018 Atc_0058 3f144b08844e65b198050ec5a4bfce41 418 Gene3D G3DSA:3.30.565.10 280 418 3.6E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0058 3f144b08844e65b198050ec5a4bfce41 418 SMART SM00387 314 418 1.5E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0058 3f144b08844e65b198050ec5a4bfce41 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 363 1.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0058 3f144b08844e65b198050ec5a4bfce41 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 1.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0058 3f144b08844e65b198050ec5a4bfce41 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 1.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0058 3f144b08844e65b198050ec5a4bfce41 418 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 417 5.5E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0058 3f144b08844e65b198050ec5a4bfce41 418 SUPERFAMILY SSF55874 285 416 3.67E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0058 3f144b08844e65b198050ec5a4bfce41 418 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 276 2.0E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0058 3f144b08844e65b198050ec5a4bfce41 418 Gene3D G3DSA:1.10.287.130 162 272 1.2E-14 T 13-10-2018 Atc_0058 3f144b08844e65b198050ec5a4bfce41 418 SMART SM00388 218 277 1.5E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0058 3f144b08844e65b198050ec5a4bfce41 418 SUPERFAMILY SSF47384 201 275 6.08E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 Pfam PF00694 Aconitase C-terminal domain 513 575 1.0E-21 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 Pfam PF00330 Aconitase family (aconitate hydratase) 7 407 5.9E-108 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 SUPERFAMILY SSF53732 1 418 1.16E-147 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 ProSitePatterns PS01244 Aconitase family signature 2. 349 362 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 Gene3D G3DSA:3.30.499.10 270 422 3.7E-49 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 SUPERFAMILY SSF52016 438 638 4.32E-51 T 13-10-2018 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 Gene3D G3DSA:3.30.499.20 4 267 1.4E-82 T 13-10-2018 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 ProSitePatterns PS00450 Aconitase family signature 1. 289 305 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 PRINTS PR00415 Aconitase family signature 110 123 1.7E-23 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 PRINTS PR00415 Aconitase family signature 200 213 1.7E-23 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 PRINTS PR00415 Aconitase family signature 349 362 1.7E-23 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 PRINTS PR00415 Aconitase family signature 186 199 1.7E-23 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 PRINTS PR00415 Aconitase family signature 124 139 1.7E-23 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 PRINTS PR00415 Aconitase family signature 90 98 1.7E-23 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 5 640 8.5E-279 T 13-10-2018 IPR006250 Aconitase, putative Atc_2441 eaec7dc15617210a6242f0e9146daa0a 645 Gene3D G3DSA:3.20.19.10 464 645 2.2E-45 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Atc_m029 f5a99e4a4772ffe240834f5f7aa6c2c8 553 SUPERFAMILY SSF56235 18 549 5.21E-140 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_m029 f5a99e4a4772ffe240834f5f7aa6c2c8 553 Pfam PF01019 Gamma-glutamyltranspeptidase 40 545 2.8E-122 T 13-10-2018 Atc_m029 f5a99e4a4772ffe240834f5f7aa6c2c8 553 Gene3D G3DSA:3.60.20.40 365 549 9.3E-63 T 13-10-2018 Atc_m029 f5a99e4a4772ffe240834f5f7aa6c2c8 553 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 142 161 3.9E-32 T 13-10-2018 Atc_m029 f5a99e4a4772ffe240834f5f7aa6c2c8 553 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 240 256 3.9E-32 T 13-10-2018 Atc_m029 f5a99e4a4772ffe240834f5f7aa6c2c8 553 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 419 434 3.9E-32 T 13-10-2018 Atc_m029 f5a99e4a4772ffe240834f5f7aa6c2c8 553 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 47 72 3.9E-32 T 13-10-2018 Atc_m029 f5a99e4a4772ffe240834f5f7aa6c2c8 553 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 364 382 3.9E-32 T 13-10-2018 Atc_m029 f5a99e4a4772ffe240834f5f7aa6c2c8 553 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 269 288 3.9E-32 T 13-10-2018 Atc_m029 f5a99e4a4772ffe240834f5f7aa6c2c8 553 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 388 406 3.9E-32 T 13-10-2018 Atc_m029 f5a99e4a4772ffe240834f5f7aa6c2c8 553 Gene3D G3DSA:1.10.246.130 256 364 6.7E-13 T 13-10-2018 Atc_0238 6cb62bc055a660442e58cbd742c2b9f5 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.27 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0238 6cb62bc055a660442e58cbd742c2b9f5 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 4.3E-41 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0238 6cb62bc055a660442e58cbd742c2b9f5 148 SUPERFAMILY SSF55653 59 146 1.01E-22 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Atc_0238 6cb62bc055a660442e58cbd742c2b9f5 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 2.5E-22 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal Atc_0238 6cb62bc055a660442e58cbd742c2b9f5 148 Gene3D G3DSA:3.10.430.100 61 147 4.1E-23 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Atc_0238 6cb62bc055a660442e58cbd742c2b9f5 148 Gene3D G3DSA:3.40.5.10 1 50 1.9E-22 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0238 6cb62bc055a660442e58cbd742c2b9f5 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.6E-23 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0238 6cb62bc055a660442e58cbd742c2b9f5 148 SUPERFAMILY SSF55658 1 56 2.27E-18 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Atc_0238 6cb62bc055a660442e58cbd742c2b9f5 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 98 116 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 629 2.4E-238 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 629 39.908 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 SUPERFAMILY SSF51419 66 343 4.86E-63 T 13-10-2018 IPR029066 PLP-binding barrel Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 Gene3D G3DSA:2.40.37.10 13 565 4.0E-218 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 Gene3D G3DSA:3.20.20.10 67 346 4.0E-218 T 13-10-2018 IPR029066 PLP-binding barrel Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 275 288 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PIRSF PIRSF001336 1 629 1.3E-236 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 SUPERFAMILY SSF50621 445 560 3.56E-5 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01180 Arginine decarboxylase signature 90 104 9.7E-72 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01180 Arginine decarboxylase signature 321 338 9.7E-72 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01180 Arginine decarboxylase signature 460 481 9.7E-72 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01180 Arginine decarboxylase signature 194 216 9.7E-72 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01180 Arginine decarboxylase signature 538 559 9.7E-72 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01180 Arginine decarboxylase signature 170 191 9.7E-72 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01180 Arginine decarboxylase signature 485 510 9.7E-72 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01180 Arginine decarboxylase signature 144 159 9.7E-72 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01180 Arginine decarboxylase signature 66 81 9.7E-72 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 7.9E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 331 350 7.9E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 121 133 7.9E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 538 551 7.9E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 237 250 7.9E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 86 341 1.3E-46 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Atc_1652 bf86a0f212ab66585749d3704105cf5a 629 Gene3D G3DSA:1.20.58.930 363 456 4.0E-218 T 13-10-2018 Atc_2670 283c8419bba280380429845a4934dc0a 471 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 55 381 1.9E-96 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Atc_2670 283c8419bba280380429845a4934dc0a 471 Pfam PF03572 Peptidase family S41 202 366 1.8E-49 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Atc_2670 283c8419bba280380429845a4934dc0a 471 Gene3D G3DSA:3.30.750.44 50 343 4.6E-95 T 13-10-2018 Atc_2670 283c8419bba280380429845a4934dc0a 471 SMART SM00228 103 174 6.4E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_2670 283c8419bba280380429845a4934dc0a 471 SUPERFAMILY SSF52096 32 372 6.46E-75 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atc_2670 283c8419bba280380429845a4934dc0a 471 SMART SM00245 176 368 9.8E-67 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Atc_2670 283c8419bba280380429845a4934dc0a 471 Gene3D G3DSA:2.30.42.10 103 190 4.6E-95 T 13-10-2018 Atc_2670 283c8419bba280380429845a4934dc0a 471 Pfam PF13180 PDZ domain 105 183 7.4E-12 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_2670 283c8419bba280380429845a4934dc0a 471 Gene3D G3DSA:3.90.226.10 191 365 4.6E-95 T 13-10-2018 Atc_2670 283c8419bba280380429845a4934dc0a 471 SUPERFAMILY SSF50156 93 187 5.73E-18 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 394 40.205 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 Pfam PF00162 Phosphoglycerate kinase 6 384 1.7E-148 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 Gene3D G3DSA:3.40.50.1260 8 392 2.9E-151 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 SUPERFAMILY SSF53748 3 394 3.53E-149 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 7.3E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 7.3E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 PRINTS PR00477 Phosphoglycerate kinase family signature 347 358 7.3E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 7.3E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 7.3E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 7.3E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 7.3E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 PRINTS PR00477 Phosphoglycerate kinase family signature 370 387 7.3E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 7.3E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 Gene3D G3DSA:3.40.50.1260 171 384 2.9E-151 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0073 10609a3b93ae807bee94fa02b47493ba 398 PIRSF PIRSF000724 1 397 1.6E-142 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_0822 f948a2143808c5a7455040a407fd9533 292 Gene3D G3DSA:3.40.50.300 43 219 6.0E-10 T 13-10-2018 Atc_0822 f948a2143808c5a7455040a407fd9533 292 Pfam PF05673 Protein of unknown function (DUF815) 28 281 3.3E-97 T 13-10-2018 IPR008533 Domain of unknown function DUF815 Atc_0822 f948a2143808c5a7455040a407fd9533 292 SUPERFAMILY SSF52540 45 191 1.21E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0822 f948a2143808c5a7455040a407fd9533 292 SMART SM00382 78 200 7.6E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0526 9381cd22a21e4d5c62094a01f2c465c6 669 SUPERFAMILY SSF74650 394 659 2.07E-51 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atc_0526 9381cd22a21e4d5c62094a01f2c465c6 669 Gene3D G3DSA:2.70.98.10 395 508 9.1E-21 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Atc_0526 9381cd22a21e4d5c62094a01f2c465c6 669 Gene3D G3DSA:2.70.98.10 509 661 3.1E-11 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Atc_0526 9381cd22a21e4d5c62094a01f2c465c6 669 Pfam PF03065 Glycosyl hydrolase family 57 9 276 9.8E-36 T 13-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Atc_0526 9381cd22a21e4d5c62094a01f2c465c6 669 SUPERFAMILY SSF88713 7 297 1.09E-54 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atc_0526 9381cd22a21e4d5c62094a01f2c465c6 669 Pfam PF09095 Domain of unknown function (DUF1926) 510 655 1.9E-20 T 13-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 Atc_0526 9381cd22a21e4d5c62094a01f2c465c6 669 Pfam PF09095 Domain of unknown function (DUF1926) 401 504 1.1E-24 T 13-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 Atc_0526 9381cd22a21e4d5c62094a01f2c465c6 669 SUPERFAMILY SSF88688 309 387 6.54E-30 T 13-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily Atc_0526 9381cd22a21e4d5c62094a01f2c465c6 669 Pfam PF09094 Domain of unknown function (DUF1925) 309 387 8.0E-36 T 13-10-2018 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain Atc_0526 9381cd22a21e4d5c62094a01f2c465c6 669 ProDom PD014405 HYDROLASE METABOLISM CARBOHYDRATE GLYCOSIDASE ALPHA-AMYLASE TRANSFERASE 4-ALPHA-GLUCANOTRANSFERASE GLYCOSYLTRANSFERASE FAMILY DIRECT 317 388 3.0E-23 T 13-10-2018 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain Atc_0526 9381cd22a21e4d5c62094a01f2c465c6 669 Gene3D G3DSA:3.20.110.20 4 385 1.8E-136 T 13-10-2018 Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 Gene3D G3DSA:3.30.460.30 1 137 1.4E-44 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 SUPERFAMILY SSF69075 296 387 2.88E-24 T 13-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 2 396 1.2E-117 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 Gene3D G3DSA:3.40.50.720 140 291 4.8E-42 T 13-10-2018 Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 78 101 - T 13-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 SUPERFAMILY SSF51735 141 293 2.3E-29 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 PIRSF PIRSF000445 1 402 2.9E-139 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 SUPERFAMILY SSF69742 11 137 5.75E-39 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 4 397 26.584 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 2 135 4.3E-39 T 13-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 151 285 2.1E-38 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Atc_0464 60f177eb41dbfd67a7479f4a625e6454 402 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 300 397 6.0E-25 T 13-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Atc_2606 64ca6c7c9d88d313184c8ecb2d8db79e 220 Pfam PF01168 Alanine racemase, N-terminal domain 5 215 2.5E-23 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atc_2606 64ca6c7c9d88d313184c8ecb2d8db79e 220 SUPERFAMILY SSF51419 14 213 6.71E-60 T 13-10-2018 IPR029066 PLP-binding barrel Atc_2606 64ca6c7c9d88d313184c8ecb2d8db79e 220 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 66 80 - T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Atc_2606 64ca6c7c9d88d313184c8ecb2d8db79e 220 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 3 214 28.55 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Atc_2606 64ca6c7c9d88d313184c8ecb2d8db79e 220 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 15 215 1.9E-57 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Atc_2606 64ca6c7c9d88d313184c8ecb2d8db79e 220 PIRSF PIRSF004848 4 220 2.9E-58 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Atc_2606 64ca6c7c9d88d313184c8ecb2d8db79e 220 Gene3D G3DSA:3.20.20.10 4 219 8.3E-65 T 13-10-2018 IPR029066 PLP-binding barrel Atc_0692 ea41325b5731b133df3958457abb9894 521 PIRSF PIRSF000414 1 520 1.4E-207 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_0692 ea41325b5731b133df3958457abb9894 521 SUPERFAMILY SSF52335 4 195 1.96E-67 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Atc_0692 ea41325b5731b133df3958457abb9894 521 Gene3D G3DSA:3.40.50.1380 1 199 3.7E-86 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Atc_0692 ea41325b5731b133df3958457abb9894 521 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 520 1.1E-207 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_0692 ea41325b5731b133df3958457abb9894 521 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 4 520 43.905 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_0692 ea41325b5731b133df3958457abb9894 521 SUPERFAMILY SSF53927 214 520 2.81E-122 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Atc_0692 ea41325b5731b133df3958457abb9894 521 Gene3D G3DSA:3.40.140.20 383 520 3.1E-55 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_0692 ea41325b5731b133df3958457abb9894 521 Pfam PF01808 AICARFT/IMPCHase bienzyme 136 451 3.8E-114 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_0692 ea41325b5731b133df3958457abb9894 521 SMART SM00798 136 452 1.4E-183 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_0692 ea41325b5731b133df3958457abb9894 521 Pfam PF02142 MGS-like domain 16 131 2.1E-25 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Atc_0692 ea41325b5731b133df3958457abb9894 521 SMART SM00851 16 131 5.6E-55 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Atc_0692 ea41325b5731b133df3958457abb9894 521 Gene3D G3DSA:3.40.140.20 211 361 6.9E-58 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atc_1373 74a156805c936984d221075eeca08008 447 Gene3D G3DSA:3.40.50.300 175 348 1.3E-47 T 13-10-2018 Atc_1373 74a156805c936984d221075eeca08008 447 PIRSF PIRSF006485 1 441 1.4E-161 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Atc_1373 74a156805c936984d221075eeca08008 447 SUPERFAMILY SSF52540 138 439 2.92E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1373 74a156805c936984d221075eeca08008 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 180 200 1.1E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_1373 74a156805c936984d221075eeca08008 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 229 244 1.1E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_1373 74a156805c936984d221075eeca08008 447 Hamap MF_00195 GTPase Der [der]. 2 436 37.216 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Atc_1373 74a156805c936984d221075eeca08008 447 Gene3D G3DSA:3.40.50.300 2 161 3.9E-42 T 13-10-2018 Atc_1373 74a156805c936984d221075eeca08008 447 Gene3D G3DSA:3.30.300.20 353 435 3.6E-21 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Atc_1373 74a156805c936984d221075eeca08008 447 Pfam PF01926 50S ribosome-binding GTPase 5 120 2.0E-25 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_1373 74a156805c936984d221075eeca08008 447 Pfam PF01926 50S ribosome-binding GTPase 179 297 1.7E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_1373 74a156805c936984d221075eeca08008 447 SUPERFAMILY SSF52540 5 163 8.33E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1373 74a156805c936984d221075eeca08008 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 178 340 5.8E-22 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atc_1373 74a156805c936984d221075eeca08008 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 6.2E-23 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atc_1373 74a156805c936984d221075eeca08008 447 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 433 1.3E-163 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Atc_1373 74a156805c936984d221075eeca08008 447 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 433 2.2E-25 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Atc_1122 a7ae36bbaeb10c59c24c848da53fcdf3 189 Gene3D G3DSA:3.40.50.2300 1 129 9.9E-13 T 13-10-2018 Atc_1122 a7ae36bbaeb10c59c24c848da53fcdf3 189 Gene3D G3DSA:1.10.10.10 132 188 7.1E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1122 a7ae36bbaeb10c59c24c848da53fcdf3 189 SMART SM01012 129 184 6.5E-21 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 Atc_1122 a7ae36bbaeb10c59c24c848da53fcdf3 189 Pfam PF00072 Response regulator receiver domain 4 109 4.9E-8 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1122 a7ae36bbaeb10c59c24c848da53fcdf3 189 SUPERFAMILY SSF52172 1 183 1.85E-42 T 13-10-2018 IPR011006 CheY-like superfamily Atc_1122 a7ae36bbaeb10c59c24c848da53fcdf3 189 Pfam PF03861 ANTAR domain 133 182 1.2E-19 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 Atc_1122 a7ae36bbaeb10c59c24c848da53fcdf3 189 PIRSF PIRSF036382 1 189 1.9E-48 T 13-10-2018 IPR008327 Signal transduction response regulator, antiterminator Atc_1122 a7ae36bbaeb10c59c24c848da53fcdf3 189 SMART SM00448 2 113 2.3E-6 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_2838 5aae2e10461584f71722d672e421b56a 114 SUPERFAMILY SSF52091 9 103 1.14E-9 T 13-10-2018 IPR036513 STAS domain superfamily Atc_2838 5aae2e10461584f71722d672e421b56a 114 Gene3D G3DSA:3.30.750.24 10 108 2.9E-9 T 13-10-2018 IPR036513 STAS domain superfamily Atc_2838 5aae2e10461584f71722d672e421b56a 114 Pfam PF13466 STAS domain 20 97 1.2E-14 T 13-10-2018 IPR002645 STAS domain Atc_2554 b827cab6cc7d0dc1d186bf1b10a71d68 145 Gene3D G3DSA:3.30.110.10 51 145 1.5E-38 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Atc_2554 b827cab6cc7d0dc1d186bf1b10a71d68 145 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 145 1.3E-59 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Atc_2554 b827cab6cc7d0dc1d186bf1b10a71d68 145 SUPERFAMILY SSF55200 59 144 2.09E-34 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Atc_2554 b827cab6cc7d0dc1d186bf1b10a71d68 145 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 145 24.899 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Atc_2554 b827cab6cc7d0dc1d186bf1b10a71d68 145 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 59 142 1.4E-38 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Atc_2554 b827cab6cc7d0dc1d186bf1b10a71d68 145 SUPERFAMILY SSF54364 1 53 1.96E-19 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Atc_2554 b827cab6cc7d0dc1d186bf1b10a71d68 145 ProSitePatterns PS00938 Initiation factor 3 signature. 33 46 - T 13-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Atc_2554 b827cab6cc7d0dc1d186bf1b10a71d68 145 Gene3D G3DSA:3.10.20.80 1 50 7.6E-21 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Atc_2554 b827cab6cc7d0dc1d186bf1b10a71d68 145 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 51 3.8E-20 T 13-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Atc_1334 0e8071526c401a3d72e805727293d03c 273 SUPERFAMILY SSF51161 3 256 8.46E-72 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Atc_1334 0e8071526c401a3d72e805727293d03c 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 210 9.3E-12 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_1334 0e8071526c401a3d72e805727293d03c 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 2.8E-145 T 13-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Atc_1334 0e8071526c401a3d72e805727293d03c 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atc_1334 0e8071526c401a3d72e805727293d03c 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.001 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_1334 0e8071526c401a3d72e805727293d03c 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 69 1.0E-24 T 13-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 Atc_1334 0e8071526c401a3d72e805727293d03c 273 Gene3D G3DSA:1.10.166.10 1 70 2.1E-29 T 13-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 Atc_1334 0e8071526c401a3d72e805727293d03c 273 Gene3D G3DSA:2.160.10.10 87 257 2.6E-56 T 13-10-2018 Atc_1334 0e8071526c401a3d72e805727293d03c 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 56.829 T 13-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Atc_2580 06c430d024ebb28ca2be052dedd6cf94 445 PRINTS PR01436 NADH-ubiquinone oxidoreductase chain 2 signature 347 359 8.4E-7 T 13-10-2018 IPR003917 NADH:ubiquinone oxidoreductase, chain 2 GO:0006120|GO:0008137|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2580 06c430d024ebb28ca2be052dedd6cf94 445 PRINTS PR01436 NADH-ubiquinone oxidoreductase chain 2 signature 284 297 8.4E-7 T 13-10-2018 IPR003917 NADH:ubiquinone oxidoreductase, chain 2 GO:0006120|GO:0008137|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2580 06c430d024ebb28ca2be052dedd6cf94 445 PRINTS PR01436 NADH-ubiquinone oxidoreductase chain 2 signature 379 398 8.4E-7 T 13-10-2018 IPR003917 NADH:ubiquinone oxidoreductase, chain 2 GO:0006120|GO:0008137|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2580 06c430d024ebb28ca2be052dedd6cf94 445 Pfam PF00361 Proton-conducting membrane transporter 113 391 2.3E-45 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0480 416a45e473f9183f4cce9e1ce44a0a02 180 SUPERFAMILY SSF56235 7 179 4.89E-57 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_0480 416a45e473f9183f4cce9e1ce44a0a02 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 10 179 1.3E-82 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Atc_0480 416a45e473f9183f4cce9e1ce44a0a02 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 9 179 39.568 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Atc_0480 416a45e473f9183f4cce9e1ce44a0a02 180 PIRSF PIRSF039093 3 180 2.9E-83 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Atc_0480 416a45e473f9183f4cce9e1ce44a0a02 180 Pfam PF00227 Proteasome subunit 8 176 1.2E-22 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Atc_0480 416a45e473f9183f4cce9e1ce44a0a02 180 Gene3D G3DSA:3.60.20.10 5 180 4.2E-67 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 Pfam PF13185 GAF domain 52 191 4.7E-11 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 Pfam PF00990 Diguanylate cyclase, GGDEF domain 330 487 2.6E-45 T 13-10-2018 IPR000160 GGDEF domain Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 SUPERFAMILY SSF55785 214 316 8.55E-26 T 13-10-2018 IPR035965 PAS domain superfamily Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 325 488 2.8E-45 T 13-10-2018 IPR000160 GGDEF domain Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 Gene3D G3DSA:3.30.70.270 323 494 1.6E-52 T 13-10-2018 Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 Pfam PF13426 PAS domain 216 316 1.3E-18 T 13-10-2018 IPR000014 PAS domain Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 SMART SM00086 276 318 9.1E-10 T 13-10-2018 IPR001610 PAC motif Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 Gene3D G3DSA:3.30.450.20 204 321 1.6E-32 T 13-10-2018 Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 Gene3D G3DSA:3.30.450.40 25 203 1.6E-14 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 216 320 7.7E-14 T 13-10-2018 IPR000014 PAS domain Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 SUPERFAMILY SSF55073 334 491 1.1E-44 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 SUPERFAMILY SSF55781 55 195 1.13E-13 T 13-10-2018 Atc_1417 8754d43f97d83ba99346c8b29ce4c0c9 518 SMART SM00267 318 492 3.1E-56 T 13-10-2018 IPR000160 GGDEF domain Atc_2698 0f95906eb496661b221c842760546e33 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.6E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2698 0f95906eb496661b221c842760546e33 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.6E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2698 0f95906eb496661b221c842760546e33 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.6E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2698 0f95906eb496661b221c842760546e33 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_2698 0f95906eb496661b221c842760546e33 86 Pfam PF01016 Ribosomal L27 protein 2 77 6.5E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2698 0f95906eb496661b221c842760546e33 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.6E-40 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2698 0f95906eb496661b221c842760546e33 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 70 1.0E-13 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2698 0f95906eb496661b221c842760546e33 86 Gene3D G3DSA:2.40.50.1030 6 85 2.0E-30 T 13-10-2018 Atc_2698 0f95906eb496661b221c842760546e33 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.045 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2698 0f95906eb496661b221c842760546e33 86 SUPERFAMILY SSF110324 2 82 4.88E-35 T 13-10-2018 Atc_2141 3c9313fcd8bc086c63b2c2cbded348d6 276 SUPERFAMILY SSF48452 35 119 4.98E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2141 3c9313fcd8bc086c63b2c2cbded348d6 276 Pfam PF13432 Tetratricopeptide repeat 33 91 6.1E-10 T 13-10-2018 Atc_2141 3c9313fcd8bc086c63b2c2cbded348d6 276 Gene3D G3DSA:1.25.40.10 29 110 2.5E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 SMART SM00463 647 725 8.2E-8 T 13-10-2018 IPR002625 Smr domain Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 1 724 16.407 T 13-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 PIRSF PIRSF005814 8 725 4.1E-146 T 13-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 Pfam PF01713 Smr domain 650 720 1.9E-12 T 13-10-2018 IPR002625 Smr domain Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 SMART SM00534 284 467 2.2E-49 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 SUPERFAMILY SSF48334 26 234 1.03E-12 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 SMART SM00533 1 268 0.0023 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 SUPERFAMILY SSF160443 648 719 2.75E-5 T 13-10-2018 IPR036063 Smr domain superfamily Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 Pfam PF00488 MutS domain V 287 466 1.5E-30 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 SUPERFAMILY SSF52540 251 467 2.41E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 Gene3D G3DSA:3.40.50.300 247 552 7.6E-68 T 13-10-2018 Atc_2263 0907a4809fcf52747761bc69bd1f3e17 725 Gene3D G3DSA:3.30.1370.110 641 725 4.2E-15 T 13-10-2018 Atc_2533 b892d853366d866ad58f92718d76916c 269 Gene3D G3DSA:3.20.20.20 1 264 6.0E-105 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atc_2533 b892d853366d866ad58f92718d76916c 269 SUPERFAMILY SSF51717 1 258 1.05E-92 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atc_2533 b892d853366d866ad58f92718d76916c 269 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atc_2533 b892d853366d866ad58f92718d76916c 269 Pfam PF00809 Pterin binding enzyme 1 243 2.0E-81 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atc_2533 b892d853366d866ad58f92718d76916c 269 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 257 1.6E-94 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Atc_1116 ac5c6e5cd8bef0fa826102af797b133f 414 Pfam PF07885 Ion channel 164 235 2.5E-16 T 13-10-2018 IPR013099 Potassium channel domain Atc_1116 ac5c6e5cd8bef0fa826102af797b133f 414 Gene3D G3DSA:1.10.287.70 133 257 3.5E-19 T 13-10-2018 Atc_1116 ac5c6e5cd8bef0fa826102af797b133f 414 Pfam PF02254 TrkA-N domain 260 366 1.5E-15 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Atc_1116 ac5c6e5cd8bef0fa826102af797b133f 414 SUPERFAMILY SSF51735 256 396 3.78E-20 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1116 ac5c6e5cd8bef0fa826102af797b133f 414 SUPERFAMILY SSF81324 143 277 4.71E-23 T 13-10-2018 Atc_1116 ac5c6e5cd8bef0fa826102af797b133f 414 Gene3D G3DSA:3.40.50.720 258 394 3.1E-21 T 13-10-2018 Atc_2826 7e10683c3a3d65aaefbcd60ab7f6e133 312 Pfam PF01297 Zinc-uptake complex component A periplasmic 49 299 6.6E-36 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Atc_2826 7e10683c3a3d65aaefbcd60ab7f6e133 312 Gene3D G3DSA:3.40.50.1980 44 186 1.1E-29 T 13-10-2018 Atc_2826 7e10683c3a3d65aaefbcd60ab7f6e133 312 SUPERFAMILY SSF53807 37 301 7.85E-55 T 13-10-2018 Atc_2231 77b4745de64b6dc505f083e2455a5fd1 367 SUPERFAMILY SSF102114 22 309 2.49E-51 T 13-10-2018 Atc_2231 77b4745de64b6dc505f083e2455a5fd1 367 TIGRFAM TIGR03470 HpnH: hopanoid biosynthesis associated radical SAM protein HpnH 1 321 2.0E-160 T 13-10-2018 IPR017833 Hopanoid biosynthesis associated radical SAM protein HpnH Atc_2231 77b4745de64b6dc505f083e2455a5fd1 367 Pfam PF04055 Radical SAM superfamily 34 186 1.4E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_2231 77b4745de64b6dc505f083e2455a5fd1 367 Gene3D G3DSA:3.20.20.70 23 296 1.0E-31 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2231 77b4745de64b6dc505f083e2455a5fd1 367 Pfam PF11946 Domain of unknown function (DUF3463) 195 331 7.1E-58 T 13-10-2018 IPR022563 Domain of unknown function DUF3463 Atc_1389 9de1d57e0f094ee2473b03ad67f536bf 368 Pfam PF00155 Aminotransferase class I and II 37 362 3.6E-55 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atc_1389 9de1d57e0f094ee2473b03ad67f536bf 368 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 226 235 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Atc_1389 9de1d57e0f094ee2473b03ad67f536bf 368 Gene3D G3DSA:3.40.640.10 50 274 1.6E-115 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_1389 9de1d57e0f094ee2473b03ad67f536bf 368 SUPERFAMILY SSF53383 19 366 1.22E-84 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_1389 9de1d57e0f094ee2473b03ad67f536bf 368 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 14 364 4.9E-106 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Atc_1389 9de1d57e0f094ee2473b03ad67f536bf 368 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 366 60.268 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Atc_1389 9de1d57e0f094ee2473b03ad67f536bf 368 Gene3D G3DSA:3.90.1150.10 15 359 1.6E-115 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_0126 f244d9b91fd49d35293d430691e100a2 319 SUPERFAMILY SSF53448 8 259 5.25E-36 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0126 f244d9b91fd49d35293d430691e100a2 319 Gene3D G3DSA:3.90.550.10 1 252 4.2E-36 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0126 f244d9b91fd49d35293d430691e100a2 319 Pfam PF00535 Glycosyl transferase family 2 9 171 9.3E-29 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atc_1003 58fbb45e013059e2d07137a7353b7d9e 398 Pfam PF03747 ADP-ribosylglycohydrolase 53 375 1.9E-52 T 13-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Atc_1003 58fbb45e013059e2d07137a7353b7d9e 398 SUPERFAMILY SSF101478 47 396 1.28E-45 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Atc_1003 58fbb45e013059e2d07137a7353b7d9e 398 Gene3D G3DSA:1.10.4080.10 46 398 3.9E-30 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Atc_0950 9239353b4d58ec824ca4b0cda17bfd61 434 Gene3D G3DSA:3.30.565.10 289 434 1.8E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0950 9239353b4d58ec824ca4b0cda17bfd61 434 SUPERFAMILY SSF47384 217 284 2.16E-9 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_0950 9239353b4d58ec824ca4b0cda17bfd61 434 SMART SM00387 325 434 9.7E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0950 9239353b4d58ec824ca4b0cda17bfd61 434 Gene3D G3DSA:1.10.287.130 179 287 4.6E-14 T 13-10-2018 Atc_0950 9239353b4d58ec824ca4b0cda17bfd61 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 1.8E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0950 9239353b4d58ec824ca4b0cda17bfd61 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 1.8E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0950 9239353b4d58ec824ca4b0cda17bfd61 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 1.8E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0950 9239353b4d58ec824ca4b0cda17bfd61 434 SMART SM00388 227 288 3.4E-4 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0950 9239353b4d58ec824ca4b0cda17bfd61 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 430 1.4E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0950 9239353b4d58ec824ca4b0cda17bfd61 434 SUPERFAMILY SSF55874 288 433 1.07E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_2673 9967fe6c2ada16867f70c54c1dd2b642 104 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 5 99 27.794 T 13-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Atc_2673 9967fe6c2ada16867f70c54c1dd2b642 104 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 21 100 3.5E-36 T 13-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Atc_2673 9967fe6c2ada16867f70c54c1dd2b642 104 SUPERFAMILY SSF54736 19 103 4.87E-33 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Atc_2673 9967fe6c2ada16867f70c54c1dd2b642 104 Gene3D G3DSA:3.30.1390.10 5 104 1.8E-42 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Atc_1188 29a8dd3997ce0386f7085069087133e3 633 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 37 352 9.2E-40 T 13-10-2018 IPR014150 Conjugal transfer, TrbL Atc_1188 29a8dd3997ce0386f7085069087133e3 633 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 65 295 2.4E-19 T 13-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Atc_0208 b0c64ca4b32d020fd7cd62c20534e19f 302 SUPERFAMILY SSF51735 8 299 2.57E-73 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0208 b0c64ca4b32d020fd7cd62c20534e19f 302 Gene3D G3DSA:3.40.50.720 14 283 2.2E-82 T 13-10-2018 Atc_0208 b0c64ca4b32d020fd7cd62c20534e19f 302 Pfam PF16363 GDP-mannose 4,6 dehydratase 38 292 2.1E-55 T 13-10-2018 IPR016040 NAD(P)-binding domain Atc_0208 b0c64ca4b32d020fd7cd62c20534e19f 302 Gene3D G3DSA:3.90.25.10 167 290 2.2E-82 T 13-10-2018 Atc_0105 e9b288a9cf23c65d8668729bfaafb74c 499 Pfam PF00795 Carbon-nitrogen hydrolase 379 485 2.2E-7 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atc_0105 e9b288a9cf23c65d8668729bfaafb74c 499 SUPERFAMILY SSF56317 322 496 1.22E-13 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_1585 ad7cef01909fb1919c927e1fe2a5877e 243 Pfam PF13545 Crp-like helix-turn-helix domain 160 221 1.7E-16 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_1585 ad7cef01909fb1919c927e1fe2a5877e 243 SMART SM00100 23 142 1.2E-9 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Atc_1585 ad7cef01909fb1919c927e1fe2a5877e 243 SUPERFAMILY SSF46785 156 221 4.14E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1585 ad7cef01909fb1919c927e1fe2a5877e 243 SUPERFAMILY SSF51206 16 152 1.57E-20 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Atc_1585 ad7cef01909fb1919c927e1fe2a5877e 243 Pfam PF00027 Cyclic nucleotide-binding domain 44 126 5.0E-9 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Atc_1585 ad7cef01909fb1919c927e1fe2a5877e 243 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 180 196 1.2E-8 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_1585 ad7cef01909fb1919c927e1fe2a5877e 243 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 196 211 1.2E-8 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_1585 ad7cef01909fb1919c927e1fe2a5877e 243 Gene3D G3DSA:2.60.120.10 17 160 2.4E-20 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_1585 ad7cef01909fb1919c927e1fe2a5877e 243 Gene3D G3DSA:1.10.10.10 161 235 2.7E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1585 ad7cef01909fb1919c927e1fe2a5877e 243 SMART SM00419 174 222 1.6E-7 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_0003 fc6b856731e620bb495db5c58bfac81d 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 337 2.4E-61 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Atc_0003 fc6b856731e620bb495db5c58bfac81d 357 Pfam PF13476 AAA domain 6 51 3.2E-6 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain Atc_0003 fc6b856731e620bb495db5c58bfac81d 357 SUPERFAMILY SSF52540 6 327 9.81E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0003 fc6b856731e620bb495db5c58bfac81d 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 61.065 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Atc_0003 fc6b856731e620bb495db5c58bfac81d 357 Gene3D G3DSA:1.20.1050.90 119 295 5.8E-63 T 13-10-2018 Atc_0003 fc6b856731e620bb495db5c58bfac81d 357 Gene3D G3DSA:3.40.50.300 6 330 5.8E-63 T 13-10-2018 Atc_0909 69cc54ca754e022d45ec1efc1a88f10a 161 SUPERFAMILY SSF89963 91 161 4.05E-25 T 13-10-2018 IPR036183 YajQ-like superfamily Atc_0909 69cc54ca754e022d45ec1efc1a88f10a 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 27.008 T 13-10-2018 IPR007551 Protein of unknown function DUF520 Atc_0909 69cc54ca754e022d45ec1efc1a88f10a 161 Gene3D G3DSA:3.30.70.990 9 98 5.0E-58 T 13-10-2018 IPR035570 UPF0234, N-terminal Atc_0909 69cc54ca754e022d45ec1efc1a88f10a 161 Gene3D G3DSA:3.30.70.860 3 160 5.0E-58 T 13-10-2018 IPR035571 UPF0234-like, C-terminal Atc_0909 69cc54ca754e022d45ec1efc1a88f10a 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 2.7E-61 T 13-10-2018 IPR007551 Protein of unknown function DUF520 Atc_0909 69cc54ca754e022d45ec1efc1a88f10a 161 SUPERFAMILY SSF89963 2 87 2.46E-30 T 13-10-2018 IPR036183 YajQ-like superfamily Atc_1424 147fac2fc3d6d9359a1510345588913d 1135 SUPERFAMILY SSF53300 384 547 1.72E-9 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atc_1457 66834b6196379829f272dd7c3bd7f86c 131 Pfam PF05130 FlgN protein 8 115 3.0E-7 T 13-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Atc_1457 66834b6196379829f272dd7c3bd7f86c 131 SUPERFAMILY SSF140566 8 105 2.35E-13 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Atc_2815 61e47a3a96a60228cc8c5922baa06a06 68 SUPERFAMILY SSF55008 2 66 1.7E-20 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atc_2815 61e47a3a96a60228cc8c5922baa06a06 68 Gene3D G3DSA:3.30.70.100 4 67 1.2E-24 T 13-10-2018 Atc_2815 61e47a3a96a60228cc8c5922baa06a06 68 Pfam PF00403 Heavy-metal-associated domain 6 63 1.4E-17 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atc_2815 61e47a3a96a60228cc8c5922baa06a06 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 SUPERFAMILY SSF50447 454 554 2.22E-17 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 Pfam PF01411 tRNA synthetases class II (A) 6 557 3.2E-225 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 299 312 7.0E-33 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 7.0E-33 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 198 209 7.0E-33 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 225 238 7.0E-33 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 275 291 7.0E-33 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 Gene3D G3DSA:3.30.54.20 626 679 4.4E-47 T 13-10-2018 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 877 195.742 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 Gene3D G3DSA:3.30.980.10 559 697 4.4E-47 T 13-10-2018 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 SUPERFAMILY SSF101353 245 460 7.19E-61 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 Gene3D G3DSA:3.10.310.40 766 874 7.5E-29 T 13-10-2018 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 SMART SM00863 655 698 5.6E-21 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 SUPERFAMILY SSF55186 554 714 1.96E-47 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 Pfam PF02272 DHHA1 domain 735 873 2.3E-25 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 SUPERFAMILY SSF55681 3 244 2.82E-110 T 13-10-2018 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 8.8E-18 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 Gene3D G3DSA:2.40.30.130 475 554 1.9E-8 T 13-10-2018 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 Gene3D G3DSA:3.30.930.10 1 241 3.1E-114 T 13-10-2018 Atc_1683 bfeafc9e0249e19fd1812b4bd4188c00 880 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 855 0.0 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atc_0326 73342caee9126ad813c59ee2deff7deb 259 Gene3D G3DSA:3.90.550.10 1 250 9.6E-81 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0326 73342caee9126ad813c59ee2deff7deb 259 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 243 1.3E-81 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Atc_0326 73342caee9126ad813c59ee2deff7deb 259 SUPERFAMILY SSF53448 1 253 3.29E-56 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0326 73342caee9126ad813c59ee2deff7deb 259 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 250 39.682 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Atc_0326 73342caee9126ad813c59ee2deff7deb 259 Pfam PF02348 Cytidylyltransferase 5 221 2.4E-45 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 Gene3D G3DSA:2.30.42.10 405 496 4.2E-13 T 13-10-2018 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 Gene3D G3DSA:2.30.42.10 295 399 1.7E-24 T 13-10-2018 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 Pfam PF13180 PDZ domain 295 386 1.3E-13 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 Pfam PF13365 Trypsin-like peptidase domain 122 256 2.4E-31 T 13-10-2018 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 SUPERFAMILY SSF50494 60 283 3.77E-56 T 13-10-2018 IPR009003 Peptidase S1, PA clan Atc_2691 b9b5d250536e61d684d20413f3a87904 496 SMART SM00228 295 377 8.5E-6 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 SMART SM00228 405 484 3.0E-4 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 61 490 6.1E-129 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 Gene3D G3DSA:2.40.10.120 60 288 5.4E-70 T 13-10-2018 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 SUPERFAMILY SSF50156 253 378 4.34E-20 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 2.3E-38 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 PRINTS PR00834 HtrA/DegQ protease family signature 335 347 2.3E-38 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 PRINTS PR00834 HtrA/DegQ protease family signature 192 216 2.3E-38 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 PRINTS PR00834 HtrA/DegQ protease family signature 249 266 2.3E-38 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 PRINTS PR00834 HtrA/DegQ protease family signature 131 143 2.3E-38 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 PRINTS PR00834 HtrA/DegQ protease family signature 152 172 2.3E-38 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atc_2691 b9b5d250536e61d684d20413f3a87904 496 SUPERFAMILY SSF50156 425 493 1.18E-11 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Atc_1539 d8c2231f5325c193b24b8fa8fa065a11 310 Pfam PF01544 CorA-like Mg2+ transporter protein 19 306 3.5E-44 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Atc_1539 d8c2231f5325c193b24b8fa8fa065a11 310 Gene3D G3DSA:1.20.58.340 128 252 6.6E-13 T 13-10-2018 Atc_1539 d8c2231f5325c193b24b8fa8fa065a11 310 SUPERFAMILY SSF144083 249 306 6.93E-8 T 13-10-2018 Atc_1539 d8c2231f5325c193b24b8fa8fa065a11 310 SUPERFAMILY SSF143865 15 242 4.71E-31 T 13-10-2018 Atc_1539 d8c2231f5325c193b24b8fa8fa065a11 310 Gene3D G3DSA:3.30.460.20 13 124 4.4E-10 T 13-10-2018 Atc_1729 636d0fabbf300e0612ddaef1969c564f 312 SUPERFAMILY SSF53613 10 289 3.59E-48 T 13-10-2018 IPR029056 Ribokinase-like Atc_1729 636d0fabbf300e0612ddaef1969c564f 312 Gene3D G3DSA:3.40.1190.20 6 294 4.8E-67 T 13-10-2018 IPR029056 Ribokinase-like Atc_1729 636d0fabbf300e0612ddaef1969c564f 312 Pfam PF00294 pfkB family carbohydrate kinase 25 286 4.2E-34 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Atc_1729 636d0fabbf300e0612ddaef1969c564f 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Atc_2749 1a8b01c208a295170532828f14ae6d7e 502 Pfam PF00263 Bacterial type II and III secretion system protein 268 428 6.3E-40 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Atc_2749 1a8b01c208a295170532828f14ae6d7e 502 PRINTS PR00811 Bacterial general secretion pathway protein D signature 393 411 2.9E-8 T 13-10-2018 IPR001775 GspD/PilQ family Atc_2749 1a8b01c208a295170532828f14ae6d7e 502 PRINTS PR00811 Bacterial general secretion pathway protein D signature 261 285 2.9E-8 T 13-10-2018 IPR001775 GspD/PilQ family Atc_2749 1a8b01c208a295170532828f14ae6d7e 502 PRINTS PR00811 Bacterial general secretion pathway protein D signature 416 430 2.9E-8 T 13-10-2018 IPR001775 GspD/PilQ family Atc_2749 1a8b01c208a295170532828f14ae6d7e 502 Pfam PF13629 Pilus formation protein N terminal region 25 92 2.5E-16 T 13-10-2018 IPR032789 Pilus formation protein, N-terminal Atc_1431 958642dcf8ff7fe9723806a00c4e331d 803 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 3.1E-160 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Atc_1431 958642dcf8ff7fe9723806a00c4e331d 803 Hamap MF_00970 Ribonuclease E [rne]. 1 802 28.943 T 13-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 Atc_1431 958642dcf8ff7fe9723806a00c4e331d 803 Gene3D G3DSA:3.40.1260.20 399 506 1.9E-31 T 13-10-2018 Atc_1431 958642dcf8ff7fe9723806a00c4e331d 803 SUPERFAMILY SSF50249 40 124 5.95E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1431 958642dcf8ff7fe9723806a00c4e331d 803 SMART SM00316 37 118 1.5E-11 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_1431 958642dcf8ff7fe9723806a00c4e331d 803 Pfam PF10150 Ribonuclease E/G family 120 389 4.5E-97 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Atc_1431 958642dcf8ff7fe9723806a00c4e331d 803 Pfam PF00575 S1 RNA binding domain 36 117 1.6E-13 T 13-10-2018 IPR003029 S1 domain GO:0003676 Atc_1431 958642dcf8ff7fe9723806a00c4e331d 803 Gene3D G3DSA:2.40.50.140 31 124 5.6E-32 T 13-10-2018 Atc_1387 ebdc106bd15de9e6215e8f4eba8ebc9d 360 Gene3D G3DSA:3.40.640.10 18 255 1.1E-88 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_1387 ebdc106bd15de9e6215e8f4eba8ebc9d 360 Pfam PF00266 Aminotransferase class-V 5 348 1.1E-52 T 13-10-2018 IPR000192 Aminotransferase class V domain Atc_1387 ebdc106bd15de9e6215e8f4eba8ebc9d 360 PIRSF PIRSF000525 1 360 5.0E-146 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Atc_1387 ebdc106bd15de9e6215e8f4eba8ebc9d 360 SUPERFAMILY SSF53383 4 357 2.09E-109 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_1387 ebdc106bd15de9e6215e8f4eba8ebc9d 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 359 5.1E-152 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Atc_1387 ebdc106bd15de9e6215e8f4eba8ebc9d 360 Gene3D G3DSA:3.90.1150.10 256 360 2.7E-38 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_1387 ebdc106bd15de9e6215e8f4eba8ebc9d 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 359 50.402 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Atc_1387 ebdc106bd15de9e6215e8f4eba8ebc9d 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Atc_0878 1a4d9d40c6440c6af33f55a2460caaf8 127 Pfam PF00085 Thioredoxin 3 102 1.1E-26 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Atc_0878 1a4d9d40c6440c6af33f55a2460caaf8 127 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 1.3E-30 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Atc_0878 1a4d9d40c6440c6af33f55a2460caaf8 127 PIRSF PIRSF000077 1 104 5.1E-28 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Atc_0878 1a4d9d40c6440c6af33f55a2460caaf8 127 PRINTS PR00421 Thioredoxin family signature 29 38 3.4E-8 T 13-10-2018 Atc_0878 1a4d9d40c6440c6af33f55a2460caaf8 127 PRINTS PR00421 Thioredoxin family signature 68 79 3.4E-8 T 13-10-2018 Atc_0878 1a4d9d40c6440c6af33f55a2460caaf8 127 PRINTS PR00421 Thioredoxin family signature 21 29 3.4E-8 T 13-10-2018 Atc_0878 1a4d9d40c6440c6af33f55a2460caaf8 127 SUPERFAMILY SSF52833 2 105 4.19E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0878 1a4d9d40c6440c6af33f55a2460caaf8 127 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Atc_0878 1a4d9d40c6440c6af33f55a2460caaf8 127 Gene3D G3DSA:3.40.30.10 1 121 2.9E-31 T 13-10-2018 Atc_2508 7245145d8a2b8d41a5e155a27787fc09 51 SUPERFAMILY SSF57829 1 49 2.08E-18 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Atc_2508 7245145d8a2b8d41a5e155a27787fc09 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.913 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2508 7245145d8a2b8d41a5e155a27787fc09 51 Pfam PF00471 Ribosomal protein L33 4 49 1.0E-17 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2508 7245145d8a2b8d41a5e155a27787fc09 51 Gene3D G3DSA:2.20.28.120 1 51 2.6E-27 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2508 7245145d8a2b8d41a5e155a27787fc09 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 5.8E-23 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2508 7245145d8a2b8d41a5e155a27787fc09 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_m052 4d98e7ef6be17ea0e0ceffffed36143f 103 Gene3D G3DSA:1.20.5.780 4 92 2.0E-31 T 13-10-2018 Atc_m052 4d98e7ef6be17ea0e0ceffffed36143f 103 Pfam PF08681 Protein of unknown function (DUF1778) 10 88 5.1E-23 T 13-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Atc_m052 4d98e7ef6be17ea0e0ceffffed36143f 103 SUPERFAMILY SSF47598 7 84 2.16E-21 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atc_1635 2e27a0bd239badbece1a77040b248b75 505 Gene3D G3DSA:1.20.1600.10 89 495 4.5E-81 T 13-10-2018 Atc_1635 2e27a0bd239badbece1a77040b248b75 505 Pfam PF02321 Outer membrane efflux protein 303 485 2.4E-29 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1635 2e27a0bd239badbece1a77040b248b75 505 Pfam PF02321 Outer membrane efflux protein 95 274 6.2E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1635 2e27a0bd239badbece1a77040b248b75 505 SUPERFAMILY SSF56954 27 486 2.22E-79 T 13-10-2018 Atc_1635 2e27a0bd239badbece1a77040b248b75 505 PIRSF PIRSF001892 24 492 3.7E-81 T 13-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 Atc_0862 5996520cafeae350cf9f008416dddfdd 525 Gene3D G3DSA:3.40.50.12780 27 362 2.9E-6 T 13-10-2018 Atc_0862 5996520cafeae350cf9f008416dddfdd 525 Pfam PF03321 GH3 auxin-responsive promoter 236 492 1.5E-46 T 13-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 Atc_0862 5996520cafeae350cf9f008416dddfdd 525 Pfam PF03321 GH3 auxin-responsive promoter 24 125 1.3E-15 T 13-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 Atc_0862 5996520cafeae350cf9f008416dddfdd 525 SUPERFAMILY SSF56801 69 385 4.19E-9 T 13-10-2018 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 SUPERFAMILY SSF53850 17 231 1.09E-81 T 13-10-2018 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 PIRSF PIRSF001438 2 319 1.4E-116 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 18 307 6.3E-104 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 17 307 36.747 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 PRINTS PR00151 Porphobilinogen deaminase signature 242 259 3.4E-40 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 PRINTS PR00151 Porphobilinogen deaminase signature 88 107 3.4E-40 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 PRINTS PR00151 Porphobilinogen deaminase signature 136 153 3.4E-40 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 PRINTS PR00151 Porphobilinogen deaminase signature 57 77 3.4E-40 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 PRINTS PR00151 Porphobilinogen deaminase signature 155 172 3.4E-40 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 SUPERFAMILY SSF54782 232 317 3.53E-21 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 239 305 1.2E-11 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 Gene3D G3DSA:3.30.160.40 233 316 4.9E-23 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 Gene3D G3DSA:3.40.190.10 18 222 8.1E-83 T 13-10-2018 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 18 225 1.7E-77 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2807 c30e871c6a10e41b90d4a5412a313355 319 Gene3D G3DSA:3.40.190.10 115 214 8.1E-83 T 13-10-2018 Atc_2p07 5842cea6179e6a450891499e9211f354 58 Pfam PF10049 Protein of unknown function (DUF2283) 3 50 9.6E-19 T 13-10-2018 IPR019270 Protein of unknown function DUF2283 Atc_0082 66a0881c77dae5f749cbbabc21293a49 261 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 55 73 - T 13-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Atc_0082 66a0881c77dae5f749cbbabc21293a49 261 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 259 1.5E-95 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Atc_0082 66a0881c77dae5f749cbbabc21293a49 261 Gene3D G3DSA:3.20.20.70 1 261 2.1E-105 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0082 66a0881c77dae5f749cbbabc21293a49 261 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 261 36.929 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Atc_0082 66a0881c77dae5f749cbbabc21293a49 261 SUPERFAMILY SSF51366 11 260 6.59E-90 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atc_0036 74f1c4932d616e2f5605dd86f4e0e5e9 611 Pfam PF01380 SIS domain 294 419 3.7E-23 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atc_0036 74f1c4932d616e2f5605dd86f4e0e5e9 611 Pfam PF01380 SIS domain 464 593 2.3E-25 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atc_0036 74f1c4932d616e2f5605dd86f4e0e5e9 611 Gene3D G3DSA:3.60.20.10 2 241 4.4E-76 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_0036 74f1c4932d616e2f5605dd86f4e0e5e9 611 SUPERFAMILY SSF56235 2 233 1.12E-69 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_0036 74f1c4932d616e2f5605dd86f4e0e5e9 611 SUPERFAMILY SSF53697 246 611 1.11E-104 T 13-10-2018 Atc_0036 74f1c4932d616e2f5605dd86f4e0e5e9 611 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 611 7.2E-238 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Atc_0036 74f1c4932d616e2f5605dd86f4e0e5e9 611 Gene3D G3DSA:3.40.50.10490 250 610 1.5E-133 T 13-10-2018 Atc_0036 74f1c4932d616e2f5605dd86f4e0e5e9 611 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 611 38.845 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Atc_0036 74f1c4932d616e2f5605dd86f4e0e5e9 611 Pfam PF13522 Glutamine amidotransferase domain 64 194 9.8E-25 T 13-10-2018 Atc_0036 74f1c4932d616e2f5605dd86f4e0e5e9 611 Gene3D G3DSA:3.40.50.10490 449 596 1.5E-133 T 13-10-2018 Atc_0370 0636cf31948612c473729902d1191827 178 Gene3D G3DSA:2.60.450.10 35 163 9.8E-32 T 13-10-2018 Atc_0370 0636cf31948612c473729902d1191827 178 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 166 19.412 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Atc_0370 0636cf31948612c473729902d1191827 178 Pfam PF03968 OstA-like protein 40 147 2.0E-22 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Atc_0370 0636cf31948612c473729902d1191827 178 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 36 165 9.5E-37 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Atc_2454 8fcf95a000bd059f453628971dc99237 127 SUPERFAMILY SSF54593 1 126 4.7E-37 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atc_2454 8fcf95a000bd059f453628971dc99237 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 2.2E-27 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atc_2454 8fcf95a000bd059f453628971dc99237 127 Gene3D G3DSA:3.10.180.10 1 127 5.9E-48 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atc_2454 8fcf95a000bd059f453628971dc99237 127 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Atc_2454 8fcf95a000bd059f453628971dc99237 127 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 126 9.9E-64 T 13-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Atc_0805 34c75416fa04be85c6ad29658ece4ec2 234 SUPERFAMILY SSF55120 64 230 3.6E-36 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_0805 34c75416fa04be85c6ad29658ece4ec2 234 Gene3D G3DSA:3.10.290.10 2 60 1.6E-11 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atc_0805 34c75416fa04be85c6ad29658ece4ec2 234 Pfam PF00849 RNA pseudouridylate synthase 65 197 1.2E-11 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_0805 34c75416fa04be85c6ad29658ece4ec2 234 SUPERFAMILY SSF55174 6 94 1.43E-11 T 13-10-2018 Atc_0805 34c75416fa04be85c6ad29658ece4ec2 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 227 1.3E-37 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Atc_0805 34c75416fa04be85c6ad29658ece4ec2 234 Pfam PF01479 S4 domain 6 49 1.3E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0805 34c75416fa04be85c6ad29658ece4ec2 234 Gene3D G3DSA:3.30.70.580 65 230 4.1E-46 T 13-10-2018 Atc_0805 34c75416fa04be85c6ad29658ece4ec2 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Atc_0805 34c75416fa04be85c6ad29658ece4ec2 234 Gene3D G3DSA:3.30.70.1560 132 214 4.1E-46 T 13-10-2018 Atc_1161 360a93364132da8b50618c2470bc44af 1253 Pfam PF01420 Type I restriction modification DNA specificity domain 1114 1232 1.2E-8 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Atc_1161 360a93364132da8b50618c2470bc44af 1253 Pfam PF01420 Type I restriction modification DNA specificity domain 892 1028 6.4E-12 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Atc_1161 360a93364132da8b50618c2470bc44af 1253 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 420 436 1.1E-15 T 13-10-2018 Atc_1161 360a93364132da8b50618c2470bc44af 1253 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 577 601 1.1E-15 T 13-10-2018 Atc_1161 360a93364132da8b50618c2470bc44af 1253 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 451 465 1.1E-15 T 13-10-2018 Atc_1161 360a93364132da8b50618c2470bc44af 1253 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 537 549 1.1E-15 T 13-10-2018 Atc_1161 360a93364132da8b50618c2470bc44af 1253 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 540 546 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_1161 360a93364132da8b50618c2470bc44af 1253 SUPERFAMILY SSF116734 1068 1253 3.6E-32 T 13-10-2018 Atc_1161 360a93364132da8b50618c2470bc44af 1253 Gene3D G3DSA:3.90.220.20 886 1016 1.8E-24 T 13-10-2018 Atc_1161 360a93364132da8b50618c2470bc44af 1253 SUPERFAMILY SSF53335 242 673 1.86E-61 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1161 360a93364132da8b50618c2470bc44af 1253 Gene3D G3DSA:3.40.50.150 401 697 5.9E-47 T 13-10-2018 Atc_1161 360a93364132da8b50618c2470bc44af 1253 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 71 153 2.9E-7 T 13-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain Atc_1161 360a93364132da8b50618c2470bc44af 1253 SUPERFAMILY SSF116734 892 1045 1.18E-23 T 13-10-2018 Atc_1161 360a93364132da8b50618c2470bc44af 1253 Pfam PF02384 N-6 DNA Methylase 401 654 1.0E-22 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Atc_1161 360a93364132da8b50618c2470bc44af 1253 Gene3D G3DSA:3.90.220.20 1065 1253 1.4E-28 T 13-10-2018 Atc_m201 4fe969b2aa5394b99ea63d30d43c4041 421 Pfam PF00665 Integrase core domain 47 176 2.1E-15 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_m105 4fe969b2aa5394b99ea63d30d43c4041 421 Pfam PF00665 Integrase core domain 47 176 2.1E-15 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_m014 4fe969b2aa5394b99ea63d30d43c4041 421 Pfam PF00665 Integrase core domain 47 176 2.1E-15 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 SUPERFAMILY SSF52540 295 496 6.78E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 Gene3D G3DSA:3.40.50.300 8 261 2.7E-60 T 13-10-2018 Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 Gene3D G3DSA:1.10.287.380 535 616 1.1E-17 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 SUPERFAMILY SSF52540 4 214 9.16E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 Pfam PF00005 ABC transporter 318 451 8.6E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 Pfam PF00005 ABC transporter 20 167 2.2E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 Pfam PF12848 ABC transporter 206 279 1.4E-10 T 13-10-2018 IPR032781 ABC-transporter extension domain Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 Gene3D G3DSA:3.40.50.300 263 532 2.3E-67 T 13-10-2018 Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 Pfam PF16326 ABC transporter C-terminal domain 545 611 1.4E-18 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 SMART SM00382 29 212 4.5E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0667 bfc162dea63323d2edc93c32f6dac0f7 619 SMART SM00382 326 496 3.1E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 624 1.9E-188 T 13-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 Gene3D G3DSA:2.20.25.90 215 268 2.4E-13 T 13-10-2018 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 SMART SM00926 215 270 1.5E-10 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 SMART SM00929 83 123 2.3E-15 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 Gene3D G3DSA:3.40.50.740 281 344 5.8E-17 T 13-10-2018 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 Gene3D G3DSA:3.40.50.740 529 652 2.0E-17 T 13-10-2018 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 Gene3D G3DSA:3.30.70.20 124 204 1.4E-7 T 13-10-2018 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 Gene3D G3DSA:3.10.20.740 1 122 2.0E-42 T 13-10-2018 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 SUPERFAMILY SSF54292 1 74 6.36E-20 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 SUPERFAMILY SSF54862 76 211 3.35E-34 T 13-10-2018 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 116 1.7E-14 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 SUPERFAMILY SSF53706 213 648 1.44E-85 T 13-10-2018 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 76 1.8E-16 T 13-10-2018 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 Gene3D G3DSA:3.40.228.10 345 408 5.8E-17 T 13-10-2018 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 Pfam PF00384 Molybdopterin oxidoreductase 274 626 2.9E-27 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2544 4a3711f4fcc126ebab2beb20c02a9a8c 776 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 216 264 2.2E-8 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0964 bcb84db252fc12ace553b6c7e70c76ae 103 SUPERFAMILY SSF47240 6 93 1.01E-23 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_0964 bcb84db252fc12ace553b6c7e70c76ae 103 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 7 101 3.6E-41 T 13-10-2018 IPR030907 Ferritin-like protein Atc_2849 153d6696d59bb778c0d3ca8e269e55df 304 PIRSF PIRSF037167 1 298 1.0E-97 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Atc_2849 153d6696d59bb778c0d3ca8e269e55df 304 SUPERFAMILY SSF53335 20 268 2.11E-51 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2849 153d6696d59bb778c0d3ca8e269e55df 304 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 205 211 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_2849 153d6696d59bb778c0d3ca8e269e55df 304 Gene3D G3DSA:1.10.8.10 27 105 6.6E-8 T 13-10-2018 Atc_2849 153d6696d59bb778c0d3ca8e269e55df 304 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 294 3.3E-102 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Atc_2849 153d6696d59bb778c0d3ca8e269e55df 304 Pfam PF05175 Methyltransferase small domain 131 216 4.6E-17 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Atc_2849 153d6696d59bb778c0d3ca8e269e55df 304 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 33 278 2.6E-65 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Atc_2849 153d6696d59bb778c0d3ca8e269e55df 304 Gene3D G3DSA:3.40.50.150 106 277 5.3E-49 T 13-10-2018 Atc_0084 9188dc6832164683e29c00df91ee0602 162 Pfam PF02082 Transcriptional regulator 1 83 9.8E-21 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Atc_0084 9188dc6832164683e29c00df91ee0602 162 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 13-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Atc_0084 9188dc6832164683e29c00df91ee0602 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.5E-32 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Atc_0084 9188dc6832164683e29c00df91ee0602 162 SUPERFAMILY SSF46785 3 133 8.91E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0084 9188dc6832164683e29c00df91ee0602 162 Gene3D G3DSA:1.10.10.10 1 139 1.3E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2416 3aa73ad3a820a9b87d4050fd36c0e1ee 742 SUPERFAMILY SSF52518 54 342 3.93E-29 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_2416 3aa73ad3a820a9b87d4050fd36c0e1ee 742 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 410 557 3.3E-12 T 13-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Atc_2416 3aa73ad3a820a9b87d4050fd36c0e1ee 742 SMART SM00861 391 579 9.7E-4 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atc_2416 3aa73ad3a820a9b87d4050fd36c0e1ee 742 SUPERFAMILY SSF52518 376 579 5.69E-29 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_2416 3aa73ad3a820a9b87d4050fd36c0e1ee 742 Pfam PF09364 XFP N-terminal domain 104 261 8.2E-8 T 13-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Atc_2416 3aa73ad3a820a9b87d4050fd36c0e1ee 742 Gene3D G3DSA:3.40.50.970 395 593 2.2E-33 T 13-10-2018 Atc_2416 3aa73ad3a820a9b87d4050fd36c0e1ee 742 Gene3D G3DSA:3.40.50.970 50 388 1.8E-36 T 13-10-2018 Atc_2848 7d5e7d57e399ab8a5528c78f15030ab7 297 Gene3D G3DSA:3.40.190.290 92 294 1.0E-33 T 13-10-2018 Atc_2848 7d5e7d57e399ab8a5528c78f15030ab7 297 SUPERFAMILY SSF53850 92 293 2.99E-30 T 13-10-2018 Atc_2848 7d5e7d57e399ab8a5528c78f15030ab7 297 Pfam PF03466 LysR substrate binding domain 91 293 2.1E-35 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_2848 7d5e7d57e399ab8a5528c78f15030ab7 297 Gene3D G3DSA:1.10.10.10 5 87 3.0E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2848 7d5e7d57e399ab8a5528c78f15030ab7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.8E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2848 7d5e7d57e399ab8a5528c78f15030ab7 297 SUPERFAMILY SSF46785 3 113 3.99E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 935 15.719 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 Gene3D G3DSA:1.10.730.10 569 803 4.7E-71 T 13-10-2018 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 PRINTS PR00986 Valyl-tRNA synthetase signature 37 48 6.2E-37 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 6.2E-37 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 PRINTS PR00986 Valyl-tRNA synthetase signature 491 509 6.2E-37 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 PRINTS PR00986 Valyl-tRNA synthetase signature 460 481 6.2E-37 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 PRINTS PR00986 Valyl-tRNA synthetase signature 358 371 6.2E-37 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 SUPERFAMILY SSF46589 870 934 2.2E-10 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 SUPERFAMILY SSF47323 627 884 1.12E-59 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 Gene3D G3DSA:3.40.50.620 310 540 5.8E-77 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 870 931 5.3E-10 T 13-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 Pfam PF08264 Anticodon-binding domain of tRNA 657 809 1.7E-41 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 Gene3D G3DSA:3.90.740.10 201 240 3.5E-5 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 SUPERFAMILY SSF50677 192 354 4.58E-57 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 Gene3D G3DSA:3.90.740.10 241 307 1.2E-9 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 616 1.9E-201 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 55 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 SUPERFAMILY SSF52374 9 626 1.79E-131 T 13-10-2018 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 Gene3D G3DSA:1.10.287.380 863 935 5.4E-16 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 Gene3D G3DSA:3.40.50.620 8 200 3.4E-60 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0721 31284a8b7240a87c65beb28d10c8abc6 938 TIGRFAM TIGR00422 valS: valine--tRNA ligase 8 917 0.0 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atc_2701 9cbee497c805307e8ff971953fc36778 410 Pfam PF00691 OmpA family 223 317 6.3E-24 T 13-10-2018 IPR006665 OmpA-like domain Atc_2701 9cbee497c805307e8ff971953fc36778 410 ProSitePatterns PS01068 OmpA-like domain. 255 299 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Atc_2701 9cbee497c805307e8ff971953fc36778 410 PRINTS PR01021 OMPA domain signature 223 245 1.1E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_2701 9cbee497c805307e8ff971953fc36778 410 PRINTS PR01021 OMPA domain signature 253 268 1.1E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_2701 9cbee497c805307e8ff971953fc36778 410 PRINTS PR01021 OMPA domain signature 268 284 1.1E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_2701 9cbee497c805307e8ff971953fc36778 410 SUPERFAMILY SSF103088 217 322 3.92E-36 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_2701 9cbee497c805307e8ff971953fc36778 410 Gene3D G3DSA:3.30.1330.60 205 326 1.0E-40 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_0569 c52a208b1ca39b747ecaddd3616ace20 169 Gene3D G3DSA:2.40.30.60 8 93 2.1E-26 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Atc_0569 c52a208b1ca39b747ecaddd3616ace20 169 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 168 2.6E-43 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Atc_0569 c52a208b1ca39b747ecaddd3616ace20 169 Gene3D G3DSA:2.30.30.240 99 169 1.1E-23 T 13-10-2018 Atc_0569 c52a208b1ca39b747ecaddd3616ace20 169 Pfam PF01782 RimM N-terminal domain 11 89 2.5E-22 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 Atc_0569 c52a208b1ca39b747ecaddd3616ace20 169 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 8 169 22.64 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Atc_0569 c52a208b1ca39b747ecaddd3616ace20 169 Pfam PF05239 PRC-barrel domain 97 164 2.8E-8 T 13-10-2018 IPR027275 PRC-barrel domain Atc_0569 c52a208b1ca39b747ecaddd3616ace20 169 SUPERFAMILY SSF50447 8 92 1.02E-19 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atc_0569 c52a208b1ca39b747ecaddd3616ace20 169 SUPERFAMILY SSF50346 99 168 2.67E-18 T 13-10-2018 IPR011033 PRC-barrel-like superfamily Atc_1568 5242916c4cc4dd95a21de754bcc890fd 185 Pfam PF01609 Transposase DDE domain 8 173 1.3E-26 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0619 e83d4ed67d4f04b62525203942959618 129 ProSitePatterns PS00053 Ribosomal protein S8 signature. 99 116 - T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0619 e83d4ed67d4f04b62525203942959618 129 Gene3D G3DSA:3.30.1370.30 2 74 7.9E-27 T 13-10-2018 Atc_0619 e83d4ed67d4f04b62525203942959618 129 SUPERFAMILY SSF56047 1 128 2.62E-45 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0619 e83d4ed67d4f04b62525203942959618 129 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 129 29.46 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0619 e83d4ed67d4f04b62525203942959618 129 Pfam PF00410 Ribosomal protein S8 3 128 4.9E-47 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0619 e83d4ed67d4f04b62525203942959618 129 Gene3D G3DSA:3.30.1490.10 75 128 1.3E-23 T 13-10-2018 Atc_2804 9cf3aeff2271fceaecf3b20b17487e50 213 PIRSF PIRSF000370 2 212 5.3E-65 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Atc_2804 9cf3aeff2271fceaecf3b20b17487e50 213 Pfam PF04055 Radical SAM superfamily 27 104 1.4E-11 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_2804 9cf3aeff2271fceaecf3b20b17487e50 213 Gene3D G3DSA:3.20.20.70 4 207 3.2E-36 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2804 9cf3aeff2271fceaecf3b20b17487e50 213 SUPERFAMILY SSF102114 26 104 2.49E-13 T 13-10-2018 Atc_2804 9cf3aeff2271fceaecf3b20b17487e50 213 Pfam PF13394 4Fe-4S single cluster domain 26 105 1.1E-8 T 13-10-2018 Atc_2804 9cf3aeff2271fceaecf3b20b17487e50 213 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 210 36.441 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Atc_2804 9cf3aeff2271fceaecf3b20b17487e50 213 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 4 213 2.1E-106 T 13-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE Atc_0487 49539fbcad4b29877ad4e2fdbbdf4404 397 Pfam PF07396 Phosphate-selective porin O and P 49 368 4.2E-15 T 13-10-2018 IPR010870 Phosphate-selective porin O/P Atc_0487 49539fbcad4b29877ad4e2fdbbdf4404 397 SUPERFAMILY SSF56935 27 360 3.3E-8 T 13-10-2018 Atc_0487 49539fbcad4b29877ad4e2fdbbdf4404 397 Gene3D G3DSA:2.40.160.10 21 378 4.2E-13 T 13-10-2018 IPR023614 Porin domain superfamily Atc_1920 132d99616f8ec89f2542948d7399ff01 270 Gene3D G3DSA:1.10.10.10 191 267 1.6E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1920 132d99616f8ec89f2542948d7399ff01 270 Gene3D G3DSA:2.60.120.10 47 190 4.2E-30 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_1920 132d99616f8ec89f2542948d7399ff01 270 Pfam PF00027 Cyclic nucleotide-binding domain 79 154 7.9E-12 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Atc_1920 132d99616f8ec89f2542948d7399ff01 270 SUPERFAMILY SSF51206 53 187 5.76E-26 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Atc_1920 132d99616f8ec89f2542948d7399ff01 270 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 218 234 6.3E-6 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_1920 132d99616f8ec89f2542948d7399ff01 270 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 234 249 6.3E-6 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_1920 132d99616f8ec89f2542948d7399ff01 270 Pfam PF13545 Crp-like helix-turn-helix domain 196 266 8.1E-18 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_1920 132d99616f8ec89f2542948d7399ff01 270 SMART SM00100 58 176 4.1E-13 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Atc_1920 132d99616f8ec89f2542948d7399ff01 270 SUPERFAMILY SSF46785 193 269 7.94E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1920 132d99616f8ec89f2542948d7399ff01 270 SMART SM00419 212 260 2.2E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_0477 3c1794cc5dbcb00f09d1c4fdb8a836c1 110 Pfam PF02635 DsrE/DsrF-like family 59 110 3.1E-6 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_0477 3c1794cc5dbcb00f09d1c4fdb8a836c1 110 Gene3D G3DSA:3.40.1260.10 4 109 4.6E-22 T 13-10-2018 IPR027396 DsrEFH-like Atc_0477 3c1794cc5dbcb00f09d1c4fdb8a836c1 110 SUPERFAMILY SSF75169 5 110 2.71E-17 T 13-10-2018 IPR027396 DsrEFH-like Atc_m165 4d8998a245f598a2db4b18c20486f99d 817 Gene3D G3DSA:3.40.50.10810 1 226 1.5E-57 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Atc_m165 4d8998a245f598a2db4b18c20486f99d 817 Gene3D G3DSA:3.40.50.300 314 490 4.2E-29 T 13-10-2018 Atc_m165 4d8998a245f598a2db4b18c20486f99d 817 Pfam PF00176 SNF2 family N-terminal domain 15 178 1.6E-13 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Atc_m165 4d8998a245f598a2db4b18c20486f99d 817 SMART SM00487 5 195 5.7E-11 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_m165 4d8998a245f598a2db4b18c20486f99d 817 SMART SM00490 379 463 2.2E-18 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_m165 4d8998a245f598a2db4b18c20486f99d 817 Pfam PF00271 Helicase conserved C-terminal domain 355 463 1.9E-17 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_m165 4d8998a245f598a2db4b18c20486f99d 817 SUPERFAMILY SSF52540 43 479 1.57E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1152 1e87d88764eee3e09be771d372d8f1ea 168 SUPERFAMILY SSF50249 3 152 3.43E-57 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1152 1e87d88764eee3e09be771d372d8f1ea 168 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 152 5.4E-53 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Atc_1152 1e87d88764eee3e09be771d372d8f1ea 168 PIRSF PIRSF002070 1 158 1.6E-38 T 13-10-2018 Atc_1152 1e87d88764eee3e09be771d372d8f1ea 168 Pfam PF00436 Single-strand binding protein family 4 107 3.2E-40 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Atc_1152 1e87d88764eee3e09be771d372d8f1ea 168 Hamap MF_00984 Single-stranded DNA-binding protein. 4 111 36.677 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Atc_1152 1e87d88764eee3e09be771d372d8f1ea 168 Gene3D G3DSA:2.40.50.140 1 125 2.8E-47 T 13-10-2018 Atc_0802 c82885a3b3ff717ad8dda817a50b1817 91 Pfam PF01649 Ribosomal protein S20 2 84 3.6E-26 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0802 c82885a3b3ff717ad8dda817a50b1817 91 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 6.0E-18 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0802 c82885a3b3ff717ad8dda817a50b1817 91 Gene3D G3DSA:1.20.58.110 1 87 1.8E-27 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0802 c82885a3b3ff717ad8dda817a50b1817 91 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 85 9.5E-25 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0802 c82885a3b3ff717ad8dda817a50b1817 91 SUPERFAMILY SSF46992 3 86 3.92E-29 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0802 c82885a3b3ff717ad8dda817a50b1817 91 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.074 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0474 b49e547a665ce6c83c56e0021a3c1b7a 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0474 b49e547a665ce6c83c56e0021a3c1b7a 222 SUPERFAMILY SSF52540 1 217 8.06E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0474 b49e547a665ce6c83c56e0021a3c1b7a 222 Pfam PF00005 ABC transporter 18 165 4.6E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0474 b49e547a665ce6c83c56e0021a3c1b7a 222 SMART SM00382 27 214 8.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0474 b49e547a665ce6c83c56e0021a3c1b7a 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.6E-83 T 13-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Atc_0474 b49e547a665ce6c83c56e0021a3c1b7a 222 Gene3D G3DSA:3.40.50.300 1 222 7.8E-64 T 13-10-2018 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 Pfam PF01751 Toprim domain 419 531 2.5E-17 T 13-10-2018 IPR006171 TOPRIM domain Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 801 0.0 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 Gene3D G3DSA:3.30.230.10 221 392 2.3E-70 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR01159 DNA gyrase subunit B signature 360 374 7.2E-73 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR01159 DNA gyrase subunit B signature 754 766 7.2E-73 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR01159 DNA gyrase subunit B signature 5 15 7.2E-73 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR01159 DNA gyrase subunit B signature 374 394 7.2E-73 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR01159 DNA gyrase subunit B signature 195 208 7.2E-73 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR01159 DNA gyrase subunit B signature 220 242 7.2E-73 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR01159 DNA gyrase subunit B signature 312 328 7.2E-73 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR01159 DNA gyrase subunit B signature 470 479 7.2E-73 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR01159 DNA gyrase subunit B signature 770 786 7.2E-73 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR01159 DNA gyrase subunit B signature 180 195 7.2E-73 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 Gene3D G3DSA:3.30.565.10 1 220 1.8E-91 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR00418 DNA topoisomerase II family signature 268 281 4.6E-72 T 13-10-2018 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR00418 DNA topoisomerase II family signature 505 522 4.6E-72 T 13-10-2018 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.6E-72 T 13-10-2018 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR00418 DNA topoisomerase II family signature 487 503 4.6E-72 T 13-10-2018 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.6E-72 T 13-10-2018 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR00418 DNA topoisomerase II family signature 420 434 4.6E-72 T 13-10-2018 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR00418 DNA topoisomerase II family signature 525 537 4.6E-72 T 13-10-2018 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR00418 DNA topoisomerase II family signature 733 749 4.6E-72 T 13-10-2018 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.6E-72 T 13-10-2018 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 SUPERFAMILY SSF54211 221 391 9.29E-57 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 SUPERFAMILY SSF55874 4 211 1.3E-71 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 172 4.5E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 801 99.087 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 SMART SM00433 35 794 1.1E-271 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 SUPERFAMILY SSF56719 394 792 9.15E-88 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 Gene3D G3DSA:3.40.50.670 398 578 1.8E-76 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 SMART SM00387 31 175 5.7E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 Gene3D G3DSA:3.40.50.670 698 800 5.0E-26 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 729 790 1.8E-30 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atc_0004 d49d1e5f0d2a37d2f02826475fc4d2b0 801 Pfam PF00204 DNA gyrase B 221 390 2.8E-56 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 Gene3D G3DSA:3.20.20.60 501 797 1.2E-79 T 13-10-2018 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 517 792 1.5E-74 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 SUPERFAMILY SSF52009 386 498 1.96E-17 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 Pfam PF03610 PTS system fructose IIA component 1 106 7.7E-15 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 Pfam PF00381 PTS HPr component phosphorylation site 161 243 5.0E-10 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Atc_0226 940308776220a67b9b37e01a2c7eea24 797 Gene3D G3DSA:3.40.50.510 1 118 1.5E-28 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 548 567 6.9E-13 T 13-10-2018 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 752 764 6.9E-13 T 13-10-2018 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 702 717 6.9E-13 T 13-10-2018 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 Pfam PF05524 PEP-utilising enzyme, N-terminal 280 386 2.4E-16 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 Gene3D G3DSA:3.30.1340.10 160 244 2.6E-8 T 13-10-2018 IPR035895 HPr-like superfamily Atc_0226 940308776220a67b9b37e01a2c7eea24 797 Pfam PF00391 PEP-utilising enzyme, mobile domain 415 482 1.5E-12 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 SUPERFAMILY SSF53062 1 114 2.96E-20 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 SUPERFAMILY SSF55594 161 243 2.22E-7 T 13-10-2018 IPR035895 HPr-like superfamily Atc_0226 940308776220a67b9b37e01a2c7eea24 797 SUPERFAMILY SSF51621 518 793 5.38E-75 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 SUPERFAMILY SSF47831 304 401 4.58E-16 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 Gene3D G3DSA:1.10.274.10 295 406 3.4E-40 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Atc_0226 940308776220a67b9b37e01a2c7eea24 797 Gene3D G3DSA:3.50.30.10 280 491 3.4E-40 T 13-10-2018 Atc_1522 3d6fc9902a91f0f484e990acefb7b6ee 527 Gene3D G3DSA:1.20.1250.20 282 515 1.5E-9 T 13-10-2018 Atc_1522 3d6fc9902a91f0f484e990acefb7b6ee 527 SUPERFAMILY SSF103473 33 508 5.1E-37 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_1522 3d6fc9902a91f0f484e990acefb7b6ee 527 Pfam PF07690 Major Facilitator Superfamily 38 396 1.4E-29 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_1522 3d6fc9902a91f0f484e990acefb7b6ee 527 Gene3D G3DSA:1.20.1720.10 32 237 1.3E-26 T 13-10-2018 Atc_0303 bd1d72cc10bbd91c44fafc284b20c98d 139 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 56 68 - T 13-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_0303 bd1d72cc10bbd91c44fafc284b20c98d 139 Pfam PF00120 Glutamine synthetase, catalytic domain 2 136 2.4E-50 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_0303 bd1d72cc10bbd91c44fafc284b20c98d 139 Gene3D G3DSA:3.30.590.10 1 127 8.5E-47 T 13-10-2018 Atc_0303 bd1d72cc10bbd91c44fafc284b20c98d 139 SUPERFAMILY SSF55931 2 138 2.55E-47 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atc_1789 6e73ae40538f6eea6948df24768df835 426 Pfam PF16360 GTP-binding GTPase Middle Region 104 182 3.0E-27 T 13-10-2018 IPR032305 GTP-binding protein, middle domain Atc_1789 6e73ae40538f6eea6948df24768df835 426 Pfam PF01926 50S ribosome-binding GTPase 190 309 1.9E-20 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_1789 6e73ae40538f6eea6948df24768df835 426 Pfam PF13167 GTP-binding GTPase N-terminal 16 102 1.3E-27 T 13-10-2018 IPR025121 GTPase HflX, N-terminal Atc_1789 6e73ae40538f6eea6948df24768df835 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 258 276 2.3E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_1789 6e73ae40538f6eea6948df24768df835 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 190 210 2.3E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_1789 6e73ae40538f6eea6948df24768df835 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 229 2.3E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_1789 6e73ae40538f6eea6948df24768df835 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 1 350 5.3E-141 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Atc_1789 6e73ae40538f6eea6948df24768df835 426 Hamap MF_00900 GTPase HflX [hflX]. 17 380 45.391 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Atc_1789 6e73ae40538f6eea6948df24768df835 426 SUPERFAMILY SSF52540 188 353 1.06E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1789 6e73ae40538f6eea6948df24768df835 426 Gene3D G3DSA:3.40.50.11060 7 128 4.6E-35 T 13-10-2018 Atc_1789 6e73ae40538f6eea6948df24768df835 426 Gene3D G3DSA:3.40.50.300 187 358 4.6E-39 T 13-10-2018 Atc_1789 6e73ae40538f6eea6948df24768df835 426 PIRSF PIRSF006809 1 412 2.0E-135 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Atc_1053 c7ecac501c6fab727754d0855eaf182d 165 Gene3D G3DSA:3.30.700.20 3 151 3.2E-48 T 13-10-2018 IPR027485 AMMECR1, N-terminal Atc_1053 c7ecac501c6fab727754d0855eaf182d 165 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 4 151 8.4E-57 T 13-10-2018 IPR027623 AmmeMemoRadiSam system protein A Atc_1053 c7ecac501c6fab727754d0855eaf182d 165 Gene3D G3DSA:3.30.1490.150 76 148 3.2E-48 T 13-10-2018 Atc_1053 c7ecac501c6fab727754d0855eaf182d 165 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 2 148 2.8E-33 T 13-10-2018 IPR023473 AMMECR1 Atc_1053 c7ecac501c6fab727754d0855eaf182d 165 SUPERFAMILY SSF143447 3 153 1.06E-51 T 13-10-2018 IPR036071 AMMECR1 domain superfamily Atc_1053 c7ecac501c6fab727754d0855eaf182d 165 Pfam PF01871 AMMECR1 5 151 4.1E-45 T 13-10-2018 IPR002733 AMMECR1 domain Atc_0373 760d9388af0c8530d57c9b272d901822 113 Gene3D G3DSA:3.30.160.100 1 98 1.7E-33 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Atc_0373 760d9388af0c8530d57c9b272d901822 113 SUPERFAMILY SSF69754 2 105 3.53E-34 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Atc_0373 760d9388af0c8530d57c9b272d901822 113 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 1.4E-28 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Atc_0373 760d9388af0c8530d57c9b272d901822 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 96 1.3E-27 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Atc_2601 ae4f719126a2250322cef67d53367265 377 SUPERFAMILY SSF51905 153 287 9.5E-6 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2601 ae4f719126a2250322cef67d53367265 377 Gene3D G3DSA:3.50.50.100 1 377 2.0E-83 T 13-10-2018 Atc_2601 ae4f719126a2250322cef67d53367265 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 288 3.3E-20 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_2601 ae4f719126a2250322cef67d53367265 377 SUPERFAMILY SSF51905 3 321 1.92E-32 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1702 24bd1663aff8897051c8966912a46835 241 Gene3D G3DSA:3.30.9.10 135 198 6.2E-6 T 13-10-2018 Atc_1702 24bd1663aff8897051c8966912a46835 241 Pfam PF01266 FAD dependent oxidoreductase 5 211 8.9E-21 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atc_1702 24bd1663aff8897051c8966912a46835 241 SUPERFAMILY SSF51905 5 213 3.69E-20 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1702 24bd1663aff8897051c8966912a46835 241 Gene3D G3DSA:3.50.50.60 112 208 6.2E-6 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1702 24bd1663aff8897051c8966912a46835 241 Gene3D G3DSA:3.50.50.60 1 77 9.7E-13 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2087 6ca6042f8d477eb6484c27f618d7febe 295 Gene3D G3DSA:1.10.486.10 31 206 3.8E-33 T 13-10-2018 Atc_2087 6ca6042f8d477eb6484c27f618d7febe 295 Pfam PF13361 UvrD-like helicase C-terminal domain 205 278 2.8E-22 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Atc_2087 6ca6042f8d477eb6484c27f618d7febe 295 Gene3D G3DSA:3.40.50.300 1 289 3.8E-33 T 13-10-2018 Atc_2087 6ca6042f8d477eb6484c27f618d7febe 295 SUPERFAMILY SSF52540 1 290 1.5E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1462 57fca16321e6e9108d43f881a8509ccc 231 Pfam PF13860 FlgD Ig-like domain 110 185 1.0E-20 T 13-10-2018 IPR025965 FlgD Ig-like domain Atc_1462 57fca16321e6e9108d43f881a8509ccc 231 Gene3D G3DSA:2.60.40.4070 110 196 1.1E-33 T 13-10-2018 Atc_1462 57fca16321e6e9108d43f881a8509ccc 231 Pfam PF13861 FlgD Tudor-like domain 93 228 1.6E-14 T 13-10-2018 IPR025963 FlgD Tudor-like domain Atc_1462 57fca16321e6e9108d43f881a8509ccc 231 Pfam PF03963 Flagellar hook capping protein - N-terminal region 19 84 5.1E-17 T 13-10-2018 IPR005648 Flagellar hook capping protein Atc_1462 57fca16321e6e9108d43f881a8509ccc 231 Gene3D G3DSA:2.30.30.910 94 224 1.1E-33 T 13-10-2018 Atc_0267 e619e2b5bee12629cfaf06cef95e7c01 168 SUPERFAMILY SSF53271 7 149 2.1E-35 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Atc_0267 e619e2b5bee12629cfaf06cef95e7c01 168 Pfam PF00156 Phosphoribosyl transferase domain 28 136 4.3E-16 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atc_0267 e619e2b5bee12629cfaf06cef95e7c01 168 Gene3D G3DSA:3.40.50.2020 6 157 1.4E-39 T 13-10-2018 Atc_1695 627b6030f33401f72de15e9f0aef183d 385 Pfam PF00924 Mechanosensitive ion channel 92 200 8.2E-18 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Atc_1695 627b6030f33401f72de15e9f0aef183d 385 SUPERFAMILY SSF50182 135 199 8.83E-7 T 13-10-2018 IPR010920 LSM domain superfamily Atc_1695 627b6030f33401f72de15e9f0aef183d 385 SUPERFAMILY SSF82861 53 131 3.14E-8 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Atc_0623 87160e15a7425676483c0eb48476381f 145 Gene3D G3DSA:3.100.10.10 70 145 1.8E-12 T 13-10-2018 Atc_0623 87160e15a7425676483c0eb48476381f 145 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 13-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0623 87160e15a7425676483c0eb48476381f 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 4.6E-30 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P Atc_0623 87160e15a7425676483c0eb48476381f 145 SUPERFAMILY SSF52080 4 144 3.79E-40 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Atc_0623 87160e15a7425676483c0eb48476381f 145 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 3.3E-46 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0623 87160e15a7425676483c0eb48476381f 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 18.763 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Atc_m184 2c39d39d62aef62ce90132809653a619 173 Pfam PF03050 Transposase IS66 family 6 121 3.9E-36 T 13-10-2018 IPR004291 Transposase, IS66 Atc_m184 2c39d39d62aef62ce90132809653a619 173 Pfam PF13817 IS66 C-terminal element 128 165 1.7E-19 T 13-10-2018 IPR039552 Transposase IS66, C-terminal Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 SUPERFAMILY SSF81301 3 123 3.27E-14 T 13-10-2018 Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 2 816 4.5E-212 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 PIRSF PIRSF006288 1 823 7.1E-238 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 Pfam PF08335 GlnD PII-uridylyltransferase 134 271 1.1E-29 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 SUPERFAMILY SSF81891 363 599 9.81E-11 T 13-10-2018 Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 SMART SM00471 398 542 2.7E-6 T 13-10-2018 IPR003607 HD/PDEase domain Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 Pfam PF01842 ACT domain 638 686 1.4E-6 T 13-10-2018 IPR002912 ACT domain Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 Gene3D G3DSA:3.30.70.260 637 710 2.9E-5 T 13-10-2018 Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 Pfam PF01966 HD domain 403 528 3.7E-7 T 13-10-2018 IPR006674 HD domain Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 SUPERFAMILY SSF81593 154 267 1.1E-9 T 13-10-2018 Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 825 212.086 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 Pfam PF01909 Nucleotidyltransferase domain 23 58 7.0E-6 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 SUPERFAMILY SSF55021 636 699 3.04E-10 T 13-10-2018 Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 SUPERFAMILY SSF55021 746 813 1.62E-7 T 13-10-2018 Atc_1693 916a6d28670f4c25fb1aa35eacb8973c 825 Gene3D G3DSA:1.10.3210.10 388 512 1.7E-6 T 13-10-2018 Atc_0283 b5283a88cba087432edb31236ed10c9f 243 SUPERFAMILY SSF52172 6 178 1.12E-28 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0283 b5283a88cba087432edb31236ed10c9f 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 8.0E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_0283 b5283a88cba087432edb31236ed10c9f 243 Pfam PF00072 Response regulator receiver domain 7 123 6.9E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0283 b5283a88cba087432edb31236ed10c9f 243 SMART SM00862 157 233 1.0E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_0283 b5283a88cba087432edb31236ed10c9f 243 Gene3D G3DSA:3.40.50.2300 1 132 1.2E-29 T 13-10-2018 Atc_0283 b5283a88cba087432edb31236ed10c9f 243 SMART SM00448 5 123 4.8E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0283 b5283a88cba087432edb31236ed10c9f 243 Gene3D G3DSA:1.10.10.10 133 238 1.6E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_m027 8b1023c2b6aadf67c972a224d44187db 460 SUPERFAMILY SSF75304 3 451 1.96E-131 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atc_m027 8b1023c2b6aadf67c972a224d44187db 460 Gene3D G3DSA:3.90.1300.10 4 452 6.5E-132 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atc_m027 8b1023c2b6aadf67c972a224d44187db 460 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 6 455 2.9E-203 T 13-10-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 Atc_m027 8b1023c2b6aadf67c972a224d44187db 460 Pfam PF01425 Amidase 23 441 4.8E-97 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atc_2693 ed6d9314959973af418318d5ed5cfd54 436 Gene3D G3DSA:3.40.50.10070 34 174 6.6E-25 T 13-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 Atc_2693 ed6d9314959973af418318d5ed5cfd54 436 Gene3D G3DSA:2.120.10.30 176 435 4.5E-64 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atc_2693 ed6d9314959973af418318d5ed5cfd54 436 Pfam PF04052 TolB amino-terminal domain 40 136 5.4E-15 T 13-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 Atc_2693 ed6d9314959973af418318d5ed5cfd54 436 SUPERFAMILY SSF52964 47 171 5.23E-21 T 13-10-2018 Atc_2693 ed6d9314959973af418318d5ed5cfd54 436 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 29 433 5.6E-104 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Atc_2693 ed6d9314959973af418318d5ed5cfd54 436 Pfam PF07676 WD40-like Beta Propeller Repeat 333 354 0.008 T 13-10-2018 IPR011659 WD40-like Beta Propeller Atc_2693 ed6d9314959973af418318d5ed5cfd54 436 Pfam PF07676 WD40-like Beta Propeller Repeat 289 323 1.6E-6 T 13-10-2018 IPR011659 WD40-like Beta Propeller Atc_2693 ed6d9314959973af418318d5ed5cfd54 436 Pfam PF07676 WD40-like Beta Propeller Repeat 387 403 0.14 T 13-10-2018 IPR011659 WD40-like Beta Propeller Atc_2693 ed6d9314959973af418318d5ed5cfd54 436 SUPERFAMILY SSF69304 164 418 1.44E-44 T 13-10-2018 Atc_2852 c02c8077d291fb4aebf3993b184f3b26 290 SUPERFAMILY SSF53335 8 266 5.16E-69 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2852 c02c8077d291fb4aebf3993b184f3b26 290 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 265 3.4E-57 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Atc_2852 c02c8077d291fb4aebf3993b184f3b26 290 Gene3D G3DSA:3.40.50.150 1 274 5.6E-80 T 13-10-2018 Atc_2852 c02c8077d291fb4aebf3993b184f3b26 290 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 258 34.986 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Atc_2412 90817ac21b8a7191d757340c8ab62029 417 Pfam PF12838 4Fe-4S dicluster domain 25 89 5.7E-13 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atc_2412 90817ac21b8a7191d757340c8ab62029 417 Pfam PF02754 Cysteine-rich domain 179 260 3.7E-10 T 13-10-2018 IPR004017 Cysteine-rich domain Atc_2412 90817ac21b8a7191d757340c8ab62029 417 Pfam PF02754 Cysteine-rich domain 309 392 3.3E-10 T 13-10-2018 IPR004017 Cysteine-rich domain Atc_2412 90817ac21b8a7191d757340c8ab62029 417 PIRSF PIRSF000139 5 416 2.0E-109 T 13-10-2018 Atc_2412 90817ac21b8a7191d757340c8ab62029 417 SUPERFAMILY SSF54862 8 103 7.11E-20 T 13-10-2018 Atc_2412 90817ac21b8a7191d757340c8ab62029 417 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atc_2412 90817ac21b8a7191d757340c8ab62029 417 Gene3D G3DSA:3.30.70.3270 1 93 1.9E-10 T 13-10-2018 Atc_0858 0d81c5fcb48d092f80ec438864c21c5f 1166 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1018 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_0858 0d81c5fcb48d092f80ec438864c21c5f 1166 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 727 4.0E-172 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_0858 0d81c5fcb48d092f80ec438864c21c5f 1166 Pfam PF14579 Helix-hairpin-helix motif 801 888 2.9E-25 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_0858 0d81c5fcb48d092f80ec438864c21c5f 1166 SMART SM00481 7 74 4.3E-27 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Atc_0858 0d81c5fcb48d092f80ec438864c21c5f 1166 Gene3D G3DSA:1.10.10.1600 430 507 1.0E-27 T 13-10-2018 Atc_0858 0d81c5fcb48d092f80ec438864c21c5f 1166 SUPERFAMILY SSF89550 6 263 4.84E-28 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Atc_0858 0d81c5fcb48d092f80ec438864c21c5f 1166 Pfam PF02811 PHP domain 8 172 5.6E-47 T 13-10-2018 IPR004013 PHP domain GO:0003824 Atc_0858 0d81c5fcb48d092f80ec438864c21c5f 1166 Gene3D G3DSA:3.20.20.140 1 269 3.2E-95 T 13-10-2018 Atc_0257 6de0edd9065c5e89d63f97fc13631eda 1146 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 11 793 1.3E-225 T 13-10-2018 Atc_0257 6de0edd9065c5e89d63f97fc13631eda 1146 Gene3D G3DSA:1.10.486.10 440 648 2.8E-148 T 13-10-2018 Atc_0257 6de0edd9065c5e89d63f97fc13631eda 1146 SUPERFAMILY SSF52540 359 796 1.38E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0257 6de0edd9065c5e89d63f97fc13631eda 1146 PIRSF PIRSF000980 8 1108 1.0E-247 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Atc_0257 6de0edd9065c5e89d63f97fc13631eda 1146 SUPERFAMILY SSF52980 809 1108 1.13E-22 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Atc_0257 6de0edd9065c5e89d63f97fc13631eda 1146 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 11 1048 9.8E-241 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Atc_0257 6de0edd9065c5e89d63f97fc13631eda 1146 Gene3D G3DSA:3.40.50.10930 11 314 2.1E-87 T 13-10-2018 Atc_0257 6de0edd9065c5e89d63f97fc13631eda 1146 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 8 1116 17.561 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Atc_0257 6de0edd9065c5e89d63f97fc13631eda 1146 Gene3D G3DSA:1.10.10.160 87 207 2.1E-87 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily Atc_0257 6de0edd9065c5e89d63f97fc13631eda 1146 SUPERFAMILY SSF52540 10 353 7.36E-80 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0257 6de0edd9065c5e89d63f97fc13631eda 1146 Gene3D G3DSA:3.40.50.300 361 793 2.8E-148 T 13-10-2018 Atc_1780 1ab339e95619b4dee5eb8b69b2648077 1471 Gene3D G3DSA:2.160.20.60 1204 1470 1.3E-100 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Atc_1780 1ab339e95619b4dee5eb8b69b2648077 1471 Gene3D G3DSA:3.60.20.10 13 539 0.0 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_1780 1ab339e95619b4dee5eb8b69b2648077 1471 Pfam PF04898 Glutamate synthase central domain 452 731 1.6E-104 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Atc_1780 1ab339e95619b4dee5eb8b69b2648077 1471 SUPERFAMILY SSF69336 1210 1461 5.89E-85 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Atc_1780 1ab339e95619b4dee5eb8b69b2648077 1471 SUPERFAMILY SSF51395 447 1183 6.87E-243 T 13-10-2018 Atc_1780 1ab339e95619b4dee5eb8b69b2648077 1471 SUPERFAMILY SSF56235 13 426 2.89E-128 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_1780 1ab339e95619b4dee5eb8b69b2648077 1471 Pfam PF01645 Conserved region in glutamate synthase 788 1150 7.4E-149 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Atc_1780 1ab339e95619b4dee5eb8b69b2648077 1471 Gene3D G3DSA:3.20.20.70 429 787 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_1780 1ab339e95619b4dee5eb8b69b2648077 1471 Gene3D G3DSA:3.20.20.70 477 1166 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_1780 1ab339e95619b4dee5eb8b69b2648077 1471 Pfam PF00310 Glutamine amidotransferases class-II 13 424 7.7E-150 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Atc_1780 1ab339e95619b4dee5eb8b69b2648077 1471 Pfam PF01493 GXGXG motif 1230 1415 2.8E-78 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 PRINTS PR00415 Aconitase family signature 83 96 2.4E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 PRINTS PR00415 Aconitase family signature 120 133 2.4E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 PRINTS PR00415 Aconitase family signature 134 149 2.4E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 PRINTS PR00415 Aconitase family signature 109 117 2.4E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 PRINTS PR00415 Aconitase family signature 401 414 2.4E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 PRINTS PR00415 Aconitase family signature 210 223 2.4E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 PRINTS PR00415 Aconitase family signature 287 301 2.4E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 PRINTS PR00415 Aconitase family signature 344 355 2.4E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 PRINTS PR00415 Aconitase family signature 196 209 2.4E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 Gene3D G3DSA:3.30.499.20 5 287 1.2E-96 T 13-10-2018 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 Pfam PF00330 Aconitase family (aconitate hydratase) 8 459 2.1E-156 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 466 2.6E-230 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 SUPERFAMILY SSF53732 3 467 2.62E-164 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 Gene3D G3DSA:3.30.499.10 325 469 1.1E-48 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Atc_0640 d8aea1dc83e5066b8b8699858ba56fb3 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 468 59.442 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Atc_m055 a646ed017e53e9adf8f72d5ed4cd7f09 93 SUPERFAMILY SSF89447 7 66 4.71E-13 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Atc_m055 a646ed017e53e9adf8f72d5ed4cd7f09 93 SMART SM00966 8 53 6.9E-7 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atc_m055 a646ed017e53e9adf8f72d5ed4cd7f09 93 Gene3D G3DSA:2.10.260.10 3 48 2.4E-18 T 13-10-2018 Atc_m055 a646ed017e53e9adf8f72d5ed4cd7f09 93 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 3.0E-8 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atc_1967 11577194d1302f72d2020e600bfb860b 733 SUPERFAMILY SSF109604 18 202 2.43E-73 T 13-10-2018 Atc_1967 11577194d1302f72d2020e600bfb860b 733 Gene3D G3DSA:3.30.460.10 204 336 1.1E-48 T 13-10-2018 Atc_1967 11577194d1302f72d2020e600bfb860b 733 Pfam PF02824 TGS domain 398 457 1.2E-19 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Atc_1967 11577194d1302f72d2020e600bfb860b 733 Pfam PF04607 Region found in RelA / SpoT proteins 246 355 1.2E-36 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Atc_1967 11577194d1302f72d2020e600bfb860b 733 Pfam PF13328 HD domain 37 186 4.6E-55 T 13-10-2018 IPR003607 HD/PDEase domain Atc_1967 11577194d1302f72d2020e600bfb860b 733 SUPERFAMILY SSF81271 385 457 4.8E-21 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Atc_1967 11577194d1302f72d2020e600bfb860b 733 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 37 728 9.6E-235 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 Atc_1967 11577194d1302f72d2020e600bfb860b 733 Gene3D G3DSA:3.30.70.260 654 733 1.5E-14 T 13-10-2018 Atc_1967 11577194d1302f72d2020e600bfb860b 733 SMART SM00954 246 356 1.8E-66 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Atc_1967 11577194d1302f72d2020e600bfb860b 733 SMART SM00471 52 164 8.3E-11 T 13-10-2018 IPR003607 HD/PDEase domain Atc_1967 11577194d1302f72d2020e600bfb860b 733 SUPERFAMILY SSF55021 656 731 7.5E-8 T 13-10-2018 Atc_1967 11577194d1302f72d2020e600bfb860b 733 Pfam PF13291 ACT domain 654 730 5.3E-17 T 13-10-2018 IPR002912 ACT domain Atc_1967 11577194d1302f72d2020e600bfb860b 733 Gene3D G3DSA:3.10.20.30 391 464 4.2E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Atc_1967 11577194d1302f72d2020e600bfb860b 733 Gene3D G3DSA:1.10.3210.10 15 201 4.8E-79 T 13-10-2018 Atc_1967 11577194d1302f72d2020e600bfb860b 733 SUPERFAMILY SSF81301 191 402 6.21E-65 T 13-10-2018 Atc_1593A 9f3c98cea8ec0c5fc6e55b5f8ba07680 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 1.8E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_1593A 9f3c98cea8ec0c5fc6e55b5f8ba07680 238 Gene3D G3DSA:1.10.10.10 126 237 9.8E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1593A 9f3c98cea8ec0c5fc6e55b5f8ba07680 238 SMART SM00862 158 234 1.1E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_1593A 9f3c98cea8ec0c5fc6e55b5f8ba07680 238 SUPERFAMILY SSF46894 132 235 1.76E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atc_1593A 9f3c98cea8ec0c5fc6e55b5f8ba07680 238 Gene3D G3DSA:3.40.50.2300 1 125 3.9E-36 T 13-10-2018 Atc_1593A 9f3c98cea8ec0c5fc6e55b5f8ba07680 238 SUPERFAMILY SSF52172 5 133 4.7E-39 T 13-10-2018 IPR011006 CheY-like superfamily Atc_1593A 9f3c98cea8ec0c5fc6e55b5f8ba07680 238 Pfam PF00072 Response regulator receiver domain 9 118 1.8E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1593A 9f3c98cea8ec0c5fc6e55b5f8ba07680 238 SMART SM00448 7 117 2.7E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 Gene3D G3DSA:1.20.1440.230 327 427 9.7E-33 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 SUPERFAMILY SSF142984 241 324 1.7E-23 T 13-10-2018 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 Pfam PF10531 SLBB domain 243 289 2.7E-14 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 Gene3D G3DSA:3.40.50.11540 53 230 3.9E-82 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 SMART SM00928 329 374 3.2E-26 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 331 414 5.8E-29 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 14 415 8.2E-194 T 13-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 SUPERFAMILY SSF142019 5 240 5.36E-87 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 48 219 3.7E-50 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 Gene3D G3DSA:3.10.20.600 232 326 2.6E-30 T 13-10-2018 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 SUPERFAMILY SSF140490 325 424 3.66E-36 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2543 a85ec181a94ef94ad4cdfebd679452ea 428 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 342 353 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0471 816fe1e8b694c03d84ca260c54440a9e 176 Gene3D G3DSA:3.40.50.620 5 169 5.6E-49 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0471 816fe1e8b694c03d84ca260c54440a9e 176 Pfam PF01467 Cytidylyltransferase-like 10 138 4.0E-17 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Atc_0471 816fe1e8b694c03d84ca260c54440a9e 176 SUPERFAMILY SSF52374 7 161 2.09E-39 T 13-10-2018 Atc_0471 816fe1e8b694c03d84ca260c54440a9e 176 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 31.778 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atc_0471 816fe1e8b694c03d84ca260c54440a9e 176 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 1.2E-43 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atc_0471 816fe1e8b694c03d84ca260c54440a9e 176 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 1.2E-43 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atc_0471 816fe1e8b694c03d84ca260c54440a9e 176 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 1.2E-43 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atc_0471 816fe1e8b694c03d84ca260c54440a9e 176 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 1.2E-43 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atc_0471 816fe1e8b694c03d84ca260c54440a9e 176 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 1.2E-43 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atc_0471 816fe1e8b694c03d84ca260c54440a9e 176 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 162 5.2E-51 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atc_0471 816fe1e8b694c03d84ca260c54440a9e 176 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 61 3.6E-15 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.427 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 3.1E-137 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 SUPERFAMILY SSF52540 151 337 8.38E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 PIRSF PIRSF002401 1 357 1.0E-130 T 13-10-2018 IPR035101 GTP-binding protein, Obg-type Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 Pfam PF01926 50S ribosome-binding GTPase 161 285 2.8E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 Gene3D G3DSA:2.70.210.12 1 158 5.3E-60 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.9E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.9E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.9E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.9E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 SUPERFAMILY SSF82051 2 158 1.44E-55 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 Pfam PF01018 GTP1/OBG 4 157 4.6E-58 T 13-10-2018 IPR006169 GTP1/OBG domain Atc_2699 c9f939ac1860a340227be0a43f5f53a4 373 Gene3D G3DSA:3.40.50.300 159 336 7.3E-50 T 13-10-2018 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 Gene3D G3DSA:1.10.287.130 691 761 7.5E-15 T 13-10-2018 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 903 916 1.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 845 859 1.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 863 873 1.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 878 896 1.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 SUPERFAMILY SSF55781 536 682 2.4E-9 T 13-10-2018 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 Pfam PF00512 His Kinase A (phospho-acceptor) domain 697 760 9.0E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 SUPERFAMILY SSF52402 273 396 4.05E-5 T 13-10-2018 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 808 918 5.0E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 Pfam PF13493 Domain of unknown function (DUF4118) 438 536 8.2E-12 T 13-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 Gene3D G3DSA:3.30.450.40 539 690 2.7E-28 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 SMART SM00388 696 764 1.2E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 42 251 1.4E-90 T 13-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 Gene3D G3DSA:3.30.565.10 775 920 2.2E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 Gene3D G3DSA:3.40.50.300 40 250 1.1E-91 T 13-10-2018 Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 SUPERFAMILY SSF55874 755 921 4.85E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 Gene3D G3DSA:1.20.120.620 429 530 2.3E-8 T 13-10-2018 IPR038318 KdpD, transmembrane domain superfamily Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 SMART SM00387 808 919 2.4E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0284 bd8df5d0561a2f6d987360c04331a7b7 927 SUPERFAMILY SSF47384 691 760 3.53E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_1765 850c8e834f803b6ebb1025f80eb2950e 164 Pfam PF10369 Small subunit of acetolactate synthase 87 160 1.9E-27 T 13-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Atc_1765 850c8e834f803b6ebb1025f80eb2950e 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 5 79 8.0E-29 T 13-10-2018 Atc_1765 850c8e834f803b6ebb1025f80eb2950e 164 Gene3D G3DSA:3.30.70.1150 86 164 2.3E-29 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Atc_1765 850c8e834f803b6ebb1025f80eb2950e 164 Pfam PF13710 ACT domain 15 76 4.8E-15 T 13-10-2018 Atc_1765 850c8e834f803b6ebb1025f80eb2950e 164 SUPERFAMILY SSF55021 81 163 4.27E-26 T 13-10-2018 Atc_1765 850c8e834f803b6ebb1025f80eb2950e 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 5 160 1.4E-63 T 13-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Atc_1765 850c8e834f803b6ebb1025f80eb2950e 164 Gene3D G3DSA:3.30.70.260 3 81 7.8E-34 T 13-10-2018 Atc_1765 850c8e834f803b6ebb1025f80eb2950e 164 SUPERFAMILY SSF55021 5 79 5.64E-23 T 13-10-2018 Atc_2862 62a651a5103ef682007209ad0b326088 261 Gene3D G3DSA:1.20.120.1220 80 227 1.1E-5 T 13-10-2018 Atc_2862 62a651a5103ef682007209ad0b326088 261 Pfam PF01478 Type IV leader peptidase family 104 216 7.4E-22 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Atc_2862 62a651a5103ef682007209ad0b326088 261 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 11 92 1.9E-35 T 13-10-2018 IPR010627 Peptidase A24A, N-terminal Atc_2862 62a651a5103ef682007209ad0b326088 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 175 185 2.2E-17 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Atc_2862 62a651a5103ef682007209ad0b326088 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 198 213 2.2E-17 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Atc_2862 62a651a5103ef682007209ad0b326088 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 112 129 2.2E-17 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Atc_2862 62a651a5103ef682007209ad0b326088 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 186 197 2.2E-17 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Atc_0585 69472fd7871866f882bf9250bf61d427 147 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 131 16.874 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 Atc_0585 69472fd7871866f882bf9250bf61d427 147 SUPERFAMILY SSF48013 2 131 6.15E-31 T 13-10-2018 IPR035926 NusB-like superfamily Atc_0585 69472fd7871866f882bf9250bf61d427 147 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 2 129 6.6E-35 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 Atc_0585 69472fd7871866f882bf9250bf61d427 147 Pfam PF01029 NusB family 2 127 8.9E-28 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Atc_0585 69472fd7871866f882bf9250bf61d427 147 Gene3D G3DSA:1.10.940.10 1 135 3.5E-37 T 13-10-2018 IPR035926 NusB-like superfamily Atc_0844 8507c18cfaa78d1fed2a7c52725d443e 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 26.611 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Atc_0844 8507c18cfaa78d1fed2a7c52725d443e 186 SUPERFAMILY SSF55194 5 185 7.2E-67 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Atc_0844 8507c18cfaa78d1fed2a7c52725d443e 186 Gene3D G3DSA:3.30.1360.40 32 106 2.2E-64 T 13-10-2018 Atc_0844 8507c18cfaa78d1fed2a7c52725d443e 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 12 186 9.4E-65 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Atc_0844 8507c18cfaa78d1fed2a7c52725d443e 186 Gene3D G3DSA:1.10.132.20 13 183 2.2E-64 T 13-10-2018 Atc_0844 8507c18cfaa78d1fed2a7c52725d443e 186 Pfam PF01765 Ribosome recycling factor 21 184 6.1E-58 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Atc_1959 233cc21ff0bf98a27d41584f58191963 300 SUPERFAMILY SSF89550 17 289 1.31E-49 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Atc_1959 233cc21ff0bf98a27d41584f58191963 300 Gene3D G3DSA:3.20.20.140 18 263 8.1E-82 T 13-10-2018 Atc_1959 233cc21ff0bf98a27d41584f58191963 300 Pfam PF02811 PHP domain 19 186 1.3E-11 T 13-10-2018 IPR004013 PHP domain GO:0003824 Atc_1959 233cc21ff0bf98a27d41584f58191963 300 SMART SM00481 18 83 3.2E-21 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Atc_1959 233cc21ff0bf98a27d41584f58191963 300 Gene3D G3DSA:1.10.150.650 111 182 8.1E-82 T 13-10-2018 Atc_0900 e32c6e27a49b20b2d30e164734d77be7 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 1.0E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_0900 e32c6e27a49b20b2d30e164734d77be7 404 Pfam PF01610 Transposase 156 390 2.4E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0900 e32c6e27a49b20b2d30e164734d77be7 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.3E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0521 aad82e782d8d354ded91438a71f999a2 172 Pfam PF04345 Chorismate lyase 17 162 8.3E-14 T 13-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Atc_0521 aad82e782d8d354ded91438a71f999a2 172 Gene3D G3DSA:3.40.1410.10 3 166 2.4E-25 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atc_0521 aad82e782d8d354ded91438a71f999a2 172 SUPERFAMILY SSF64288 7 166 3.34E-27 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atc_0976 dbd8d238adfcf23d9c1f4166cdcae9d2 121 Pfam PF12840 Helix-turn-helix domain 12 72 1.3E-15 T 13-10-2018 Atc_0976 dbd8d238adfcf23d9c1f4166cdcae9d2 121 SMART SM00418 11 92 1.3E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0976 dbd8d238adfcf23d9c1f4166cdcae9d2 121 Gene3D G3DSA:1.10.10.10 1 96 6.4E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0976 dbd8d238adfcf23d9c1f4166cdcae9d2 121 SUPERFAMILY SSF46785 3 96 6.17E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0240 918c86b966bcc77420fc68095ac3a413 92 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 40 89 8.0E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0240 918c86b966bcc77420fc68095ac3a413 92 Pfam PF01084 Ribosomal protein S18 38 87 4.8E-23 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0240 918c86b966bcc77420fc68095ac3a413 92 ProSitePatterns PS00057 Ribosomal protein S18 signature. 40 63 - T 13-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0240 918c86b966bcc77420fc68095ac3a413 92 TIGRFAM TIGR00165 S18: ribosomal protein bS18 24 91 5.1E-33 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0240 918c86b966bcc77420fc68095ac3a413 92 SUPERFAMILY SSF46911 22 91 3.66E-27 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0240 918c86b966bcc77420fc68095ac3a413 92 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 21 92 20.056 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0240 918c86b966bcc77420fc68095ac3a413 92 PRINTS PR00974 Ribosomal protein S18 family signature 57 64 4.7E-16 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0240 918c86b966bcc77420fc68095ac3a413 92 PRINTS PR00974 Ribosomal protein S18 family signature 79 89 4.7E-16 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0240 918c86b966bcc77420fc68095ac3a413 92 PRINTS PR00974 Ribosomal protein S18 family signature 47 57 4.7E-16 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0240 918c86b966bcc77420fc68095ac3a413 92 PRINTS PR00974 Ribosomal protein S18 family signature 65 79 4.7E-16 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0240 918c86b966bcc77420fc68095ac3a413 92 Gene3D G3DSA:4.10.640.10 5 92 6.1E-25 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0520 ae74b904f0f5e98bc9e43a1db2026bf6 286 Pfam PF01040 UbiA prenyltransferase family 26 267 3.4E-60 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Atc_0520 ae74b904f0f5e98bc9e43a1db2026bf6 286 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 4.0E-97 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Atc_0520 ae74b904f0f5e98bc9e43a1db2026bf6 286 Gene3D G3DSA:1.20.120.1780 168 286 4.9E-13 T 13-10-2018 Atc_0520 ae74b904f0f5e98bc9e43a1db2026bf6 286 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 3 285 28.137 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Atc_0520 ae74b904f0f5e98bc9e43a1db2026bf6 286 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 65 87 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site Atc_0520 ae74b904f0f5e98bc9e43a1db2026bf6 286 Gene3D G3DSA:1.10.357.140 23 167 8.0E-39 T 13-10-2018 Atc_0302 5f502f3af556309bd804636529693345 310 SUPERFAMILY SSF55931 104 280 4.51E-60 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atc_0302 5f502f3af556309bd804636529693345 310 Pfam PF00120 Glutamine synthetase, catalytic domain 104 280 6.0E-55 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_0302 5f502f3af556309bd804636529693345 310 Gene3D G3DSA:3.30.590.10 107 301 1.0E-64 T 13-10-2018 Atc_0302 5f502f3af556309bd804636529693345 310 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atc_0302 5f502f3af556309bd804636529693345 310 SUPERFAMILY SSF54368 5 102 2.22E-35 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_0302 5f502f3af556309bd804636529693345 310 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atc_0302 5f502f3af556309bd804636529693345 310 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 1.4E-30 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atc_0302 5f502f3af556309bd804636529693345 310 SMART SM01230 104 307 2.5E-62 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_0302 5f502f3af556309bd804636529693345 310 Gene3D G3DSA:3.10.20.70 4 106 2.1E-38 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_1785 b544089c0a1eb8356a772d79b77016f7 429 Pfam PF00709 Adenylosuccinate synthetase 5 423 8.4E-178 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atc_1785 b544089c0a1eb8356a772d79b77016f7 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atc_1785 b544089c0a1eb8356a772d79b77016f7 429 Gene3D G3DSA:1.10.300.10 102 201 4.0E-98 T 13-10-2018 Atc_1785 b544089c0a1eb8356a772d79b77016f7 429 Gene3D G3DSA:3.90.170.10 267 428 1.4E-65 T 13-10-2018 Atc_1785 b544089c0a1eb8356a772d79b77016f7 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 206.708 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atc_1785 b544089c0a1eb8356a772d79b77016f7 429 SUPERFAMILY SSF52540 4 427 1.91E-170 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1785 b544089c0a1eb8356a772d79b77016f7 429 SMART SM00788 4 424 1.9E-289 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atc_1785 b544089c0a1eb8356a772d79b77016f7 429 Gene3D G3DSA:3.40.440.10 6 249 4.0E-98 T 13-10-2018 Atc_1785 b544089c0a1eb8356a772d79b77016f7 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 427 1.2E-170 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atc_1785 b544089c0a1eb8356a772d79b77016f7 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 13-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atc_m107 73dca9860a5a1367ff5a7db8163ddc1b 152 SUPERFAMILY SSF55729 34 135 1.66E-22 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atc_m107 73dca9860a5a1367ff5a7db8163ddc1b 152 Gene3D G3DSA:3.40.630.30 11 142 3.3E-20 T 13-10-2018 Atc_m107 73dca9860a5a1367ff5a7db8163ddc1b 152 Pfam PF00583 Acetyltransferase (GNAT) family 38 133 2.2E-15 T 13-10-2018 IPR000182 GNAT domain Atc_1090 d41d13f6a58cfb0e03038a76be56e191 564 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 82 129 3.4E-10 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1090 d41d13f6a58cfb0e03038a76be56e191 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 322 334 1.6E-23 T 13-10-2018 Atc_1090 d41d13f6a58cfb0e03038a76be56e191 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 116 1.6E-23 T 13-10-2018 Atc_1090 d41d13f6a58cfb0e03038a76be56e191 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 119 139 1.6E-23 T 13-10-2018 Atc_1090 d41d13f6a58cfb0e03038a76be56e191 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 166 187 1.6E-23 T 13-10-2018 Atc_1090 d41d13f6a58cfb0e03038a76be56e191 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 233 254 1.6E-23 T 13-10-2018 Atc_1090 d41d13f6a58cfb0e03038a76be56e191 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 255 281 1.6E-23 T 13-10-2018 Atc_1090 d41d13f6a58cfb0e03038a76be56e191 564 Pfam PF00361 Proton-conducting membrane transporter 144 380 1.9E-34 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 SUPERFAMILY SSF46929 145 188 3.92E-8 T 13-10-2018 IPR036267 RuvA, C-terminal domain superfamily Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 SMART SM00278 108 127 0.19 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 SMART SM00278 73 92 100.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 Gene3D G3DSA:1.10.150.20 67 137 7.1E-26 T 13-10-2018 Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 SUPERFAMILY SSF47781 66 133 7.04E-20 T 13-10-2018 IPR010994 RuvA domain 2-like Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 Gene3D G3DSA:2.40.50.140 1 66 4.4E-25 T 13-10-2018 Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 188 2.5E-52 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 Pfam PF07499 RuvA, C-terminal domain 145 188 3.0E-14 T 13-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.9E-16 T 13-10-2018 Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 189 29.848 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 SUPERFAMILY SSF50249 1 63 1.83E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 Gene3D G3DSA:1.10.8.10 143 188 3.7E-12 T 13-10-2018 Atc_2796 0b3b4d3b18377133d36b3047687a2c9d 191 Pfam PF01330 RuvA N terminal domain 1 62 2.4E-20 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 PIRSF PIRSF000770 5 237 2.3E-33 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 Pfam PF04539 Sigma-70 region 3 100 165 4.8E-11 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 SUPERFAMILY SSF88659 90 160 2.01E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 SUPERFAMILY SSF88946 9 89 9.42E-19 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 1.2E-74 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 Gene3D G3DSA:1.10.1740.10 2 86 3.6E-24 T 13-10-2018 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 Pfam PF04545 Sigma-70, region 4 184 233 3.8E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 SUPERFAMILY SSF88659 151 235 9.72E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 Gene3D G3DSA:1.20.140.160 88 237 6.4E-45 T 13-10-2018 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 PRINTS PR00046 Major sigma-70 factor signature 188 200 6.5E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 PRINTS PR00046 Major sigma-70 factor signature 43 56 6.5E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 PRINTS PR00046 Major sigma-70 factor signature 220 231 6.5E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 PRINTS PR00046 Major sigma-70 factor signature 205 220 6.5E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 Pfam PF04542 Sigma-70 region 2 16 89 4.2E-11 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atc_1500 ac7d43df5d306a269a6fa1923ae13c9e 241 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 233 1.2E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atc_1478 92c74daf03ffcada761c6ddaa1b9c5b8 125 PIRSF PIRSF039090 2 124 5.3E-24 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Atc_1478 92c74daf03ffcada761c6ddaa1b9c5b8 125 SUPERFAMILY SSF101116 7 123 1.83E-23 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Atc_1478 92c74daf03ffcada761c6ddaa1b9c5b8 125 Gene3D G3DSA:1.20.120.340 1 124 1.7E-26 T 13-10-2018 Atc_1478 92c74daf03ffcada761c6ddaa1b9c5b8 125 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 121 1.5E-22 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Atc_1478 92c74daf03ffcada761c6ddaa1b9c5b8 125 Pfam PF02561 Flagellar protein FliS 9 120 4.1E-26 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Atc_1434 93ce9b5053c256a99d996f5d7686aa73 267 Gene3D G3DSA:1.10.3720.10 20 266 1.3E-48 T 13-10-2018 IPR035906 MetI-like superfamily Atc_1434 93ce9b5053c256a99d996f5d7686aa73 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 260 9.8E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atc_1434 93ce9b5053c256a99d996f5d7686aa73 267 SUPERFAMILY SSF161098 21 258 3.53E-39 T 13-10-2018 IPR035906 MetI-like superfamily Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 PRINTS PR00046 Major sigma-70 factor signature 85 98 4.1E-21 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 PRINTS PR00046 Major sigma-70 factor signature 227 239 4.1E-21 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 PRINTS PR00046 Major sigma-70 factor signature 263 274 4.1E-21 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 PRINTS PR00046 Major sigma-70 factor signature 109 117 4.1E-21 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 PRINTS PR00046 Major sigma-70 factor signature 248 263 4.1E-21 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 85 98 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 Pfam PF04545 Sigma-70, region 4 224 276 4.3E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 Pfam PF04542 Sigma-70 region 2 61 128 3.1E-20 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 Gene3D G3DSA:1.20.120.1810 6 129 1.9E-31 T 13-10-2018 Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 Gene3D G3DSA:1.10.10.10 205 281 1.5E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 SUPERFAMILY SSF88946 32 127 6.28E-33 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 57 278 3.1E-34 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 SUPERFAMILY SSF88659 200 280 1.07E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_2266 1d00037a9ef822040fb95af2f71ccd61 285 PIRSF PIRSF000770 33 282 1.8E-34 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0839 115e2e211c13c03f4703c0b242bf56fd 502 SUPERFAMILY SSF109604 315 493 3.14E-35 T 13-10-2018 Atc_0839 115e2e211c13c03f4703c0b242bf56fd 502 Gene3D G3DSA:3.30.420.150 117 297 3.9E-77 T 13-10-2018 Atc_0839 115e2e211c13c03f4703c0b242bf56fd 502 Gene3D G3DSA:1.10.3210.10 312 500 6.4E-48 T 13-10-2018 Atc_0839 115e2e211c13c03f4703c0b242bf56fd 502 SUPERFAMILY SSF53067 13 133 9.71E-32 T 13-10-2018 Atc_0839 115e2e211c13c03f4703c0b242bf56fd 502 SUPERFAMILY SSF53067 139 313 1.97E-40 T 13-10-2018 Atc_0839 115e2e211c13c03f4703c0b242bf56fd 502 Gene3D G3DSA:3.30.420.40 14 305 3.9E-77 T 13-10-2018 Atc_0839 115e2e211c13c03f4703c0b242bf56fd 502 PIRSF PIRSF001267 3 498 5.1E-161 T 13-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 Atc_0839 115e2e211c13c03f4703c0b242bf56fd 502 Pfam PF02541 Ppx/GppA phosphatase family 26 309 1.9E-75 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Atc_1346 2b76c5288d8971c22c9a372cf596706a 973 Gene3D G3DSA:3.40.720.10 603 859 2.7E-10 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atc_1346 2b76c5288d8971c22c9a372cf596706a 973 SUPERFAMILY SSF53649 558 839 1.02E-6 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Atc_1346 2b76c5288d8971c22c9a372cf596706a 973 SUPERFAMILY SSF50974 183 447 6.54E-27 T 13-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 Atc_1346 2b76c5288d8971c22c9a372cf596706a 973 Gene3D G3DSA:2.130.10.10 175 344 1.3E-13 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_1346 2b76c5288d8971c22c9a372cf596706a 973 Gene3D G3DSA:2.130.10.10 345 462 1.6E-16 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_1346 2b76c5288d8971c22c9a372cf596706a 973 Pfam PF04185 Phosphoesterase family 718 835 2.2E-6 T 13-10-2018 IPR007312 Phosphoesterase GO:0016788 Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 401 8.1E-139 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 Gene3D G3DSA:3.40.1160.10 1 253 5.8E-91 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 Pfam PF13840 ACT domain 337 398 2.0E-16 T 13-10-2018 IPR027795 CASTOR, ACT domain Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 1.7E-123 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 Gene3D G3DSA:3.30.70.260 254 402 2.9E-57 T 13-10-2018 Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 Gene3D G3DSA:3.30.70.260 260 337 2.9E-57 T 13-10-2018 Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 PIRSF PIRSF000726 54 407 2.4E-144 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 PIRSF PIRSF000726 1 60 5.9E-22 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 SUPERFAMILY SSF53633 4 243 1.15E-74 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 Pfam PF00696 Amino acid kinase family 3 229 2.3E-51 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 SUPERFAMILY SSF55021 247 325 1.29E-16 T 13-10-2018 Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 Pfam PF01842 ACT domain 267 324 1.6E-9 T 13-10-2018 IPR002912 ACT domain Atc_2450 23bd3145f4f7f6840a1feb92cf27c9ff 408 SUPERFAMILY SSF55021 326 403 1.05E-24 T 13-10-2018 Atc_0093 577a8fc80f5469da2c8604a55bfa6903 484 Pfam PF11855 Protein of unknown function (DUF3375) 11 482 5.5E-161 T 13-10-2018 IPR021804 Protein of unknown function DUF3375 Atc_0609 059368f2331661290976112eae331b2b 91 PIRSF PIRSF002144 1 91 1.3E-31 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0609 059368f2331661290976112eae331b2b 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 5.7E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0609 059368f2331661290976112eae331b2b 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 5.7E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0609 059368f2331661290976112eae331b2b 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 5.7E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0609 059368f2331661290976112eae331b2b 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 6.0E-42 T 13-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Atc_0609 059368f2331661290976112eae331b2b 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0609 059368f2331661290976112eae331b2b 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.105 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0609 059368f2331661290976112eae331b2b 91 Pfam PF00203 Ribosomal protein S19 3 83 8.6E-34 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0609 059368f2331661290976112eae331b2b 91 SUPERFAMILY SSF54570 3 84 3.4E-33 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0609 059368f2331661290976112eae331b2b 91 Gene3D G3DSA:3.30.860.10 1 91 9.9E-38 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_2655 4747f6c97f4ab0861e53e94fc3f4b4e6 478 Pfam PF08245 Mur ligase middle domain 110 305 2.3E-43 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Atc_2655 4747f6c97f4ab0861e53e94fc3f4b4e6 478 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 476 9.3E-129 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Atc_2655 4747f6c97f4ab0861e53e94fc3f4b4e6 478 SUPERFAMILY SSF63418 16 99 2.75E-14 T 13-10-2018 IPR035911 MurE/MurF, N-terminal Atc_2655 4747f6c97f4ab0861e53e94fc3f4b4e6 478 Pfam PF01225 Mur ligase family, catalytic domain 24 96 1.5E-5 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Atc_2655 4747f6c97f4ab0861e53e94fc3f4b4e6 478 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 476 29.349 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Atc_2655 4747f6c97f4ab0861e53e94fc3f4b4e6 478 SUPERFAMILY SSF53244 324 476 6.8E-46 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_2655 4747f6c97f4ab0861e53e94fc3f4b4e6 478 Gene3D G3DSA:3.40.1390.10 5 99 3.6E-17 T 13-10-2018 Atc_2655 4747f6c97f4ab0861e53e94fc3f4b4e6 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 410 7.3E-21 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Atc_2655 4747f6c97f4ab0861e53e94fc3f4b4e6 478 SUPERFAMILY SSF53623 106 315 1.14E-59 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_2655 4747f6c97f4ab0861e53e94fc3f4b4e6 478 Gene3D G3DSA:3.40.1190.10 103 326 5.1E-60 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_2655 4747f6c97f4ab0861e53e94fc3f4b4e6 478 Gene3D G3DSA:3.90.190.20 331 478 3.0E-56 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_1378 02818a8e4bbdaf6e0857049f2f6da5ff 214 Gene3D G3DSA:3.90.420.10 29 211 1.9E-46 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Atc_1378 02818a8e4bbdaf6e0857049f2f6da5ff 214 SUPERFAMILY SSF56524 28 203 9.16E-47 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Atc_1378 02818a8e4bbdaf6e0857049f2f6da5ff 214 Pfam PF00174 Oxidoreductase molybdopterin binding domain 47 193 3.0E-32 T 13-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Atc_1722 9a94e2fed2a692a158df7bac51b72e16 221 PIRSF PIRSF037290 2 217 5.7E-57 T 13-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 Atc_1722 9a94e2fed2a692a158df7bac51b72e16 221 Pfam PF03846 Cell division inhibitor SulA 53 141 8.9E-12 T 13-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 Atc_1722 9a94e2fed2a692a158df7bac51b72e16 221 Gene3D G3DSA:3.40.50.300 54 168 6.2E-45 T 13-10-2018 Atc_1722 9a94e2fed2a692a158df7bac51b72e16 221 SUPERFAMILY SSF52540 53 167 9.74E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2309 bcd32a6ad5124922c42bba32c41b25d5 586 SMART SM00382 367 559 8.6E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2309 bcd32a6ad5124922c42bba32c41b25d5 586 SUPERFAMILY SSF90123 6 325 3.4E-40 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atc_2309 bcd32a6ad5124922c42bba32c41b25d5 586 Pfam PF00005 ABC transporter 358 506 4.7E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_2309 bcd32a6ad5124922c42bba32c41b25d5 586 Gene3D G3DSA:3.40.50.300 330 578 3.6E-80 T 13-10-2018 Atc_2309 bcd32a6ad5124922c42bba32c41b25d5 586 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 537 3.7E-135 T 13-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 Atc_2309 bcd32a6ad5124922c42bba32c41b25d5 586 Gene3D G3DSA:1.20.1560.10 4 322 3.3E-32 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atc_2309 bcd32a6ad5124922c42bba32c41b25d5 586 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_2309 bcd32a6ad5124922c42bba32c41b25d5 586 SUPERFAMILY SSF52540 335 567 3.81E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1370 5e8757346b3d4567f9b7fa9505f91f95 441 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 394 2.5E-134 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Atc_1370 5e8757346b3d4567f9b7fa9505f91f95 441 Gene3D G3DSA:3.30.930.10 4 318 3.7E-112 T 13-10-2018 Atc_1370 5e8757346b3d4567f9b7fa9505f91f95 441 Pfam PF13393 Histidyl-tRNA synthetase 11 311 3.3E-46 T 13-10-2018 Atc_1370 5e8757346b3d4567f9b7fa9505f91f95 441 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 418 29.884 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Atc_1370 5e8757346b3d4567f9b7fa9505f91f95 441 SUPERFAMILY SSF55681 7 315 2.19E-95 T 13-10-2018 Atc_1370 5e8757346b3d4567f9b7fa9505f91f95 441 PIRSF PIRSF001549 3 402 5.4E-104 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Atc_1491 605da21dce576f3aab526a79bafee86b 150 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 70 140 1.7E-24 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) Atc_1491 605da21dce576f3aab526a79bafee86b 150 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 67 141 2.3E-33 T 13-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Atc_1491 605da21dce576f3aab526a79bafee86b 150 Gene3D G3DSA:2.30.330.10 61 150 4.7E-34 T 13-10-2018 IPR036429 SpoA-like superfamily Atc_1491 605da21dce576f3aab526a79bafee86b 150 SUPERFAMILY SSF101801 67 146 4.32E-25 T 13-10-2018 IPR036429 SpoA-like superfamily Atc_1491 605da21dce576f3aab526a79bafee86b 150 PRINTS PR00956 Flagellar motor switch protein FliN signature 87 103 1.3E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Atc_1491 605da21dce576f3aab526a79bafee86b 150 PRINTS PR00956 Flagellar motor switch protein FliN signature 116 131 1.3E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Atc_1491 605da21dce576f3aab526a79bafee86b 150 PRINTS PR00956 Flagellar motor switch protein FliN signature 103 116 1.3E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Atc_1491 605da21dce576f3aab526a79bafee86b 150 PRINTS PR00956 Flagellar motor switch protein FliN signature 70 86 1.3E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 SUPERFAMILY SSF53218 183 327 4.32E-43 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 SUPERFAMILY SSF63867 334 411 6.02E-21 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 183 319 7.3E-30 T 13-10-2018 IPR001453 MoaB/Mog domain Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 SUPERFAMILY SSF63882 15 181 1.96E-52 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 Gene3D G3DSA:2.170.190.11 58 147 1.6E-135 T 13-10-2018 Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 Pfam PF03454 MoeA C-terminal region (domain IV) 338 408 3.4E-16 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 Gene3D G3DSA:2.40.340.10 334 403 1.6E-135 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 SMART SM00852 186 323 1.7E-43 T 13-10-2018 IPR001453 MoaB/Mog domain Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 Pfam PF03453 MoeA N-terminal region (domain I and II) 16 173 1.4E-44 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 Gene3D G3DSA:3.90.105.10 34 180 1.6E-135 T 13-10-2018 Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 Gene3D G3DSA:3.40.980.10 181 333 1.6E-135 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atc_2181 ef4531e9c9299ec44b1917007a911c30 412 Pfam PF00994 Probable molybdopterin binding domain 188 321 3.2E-27 T 13-10-2018 IPR001453 MoaB/Mog domain Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 SMART SM00881 4 100 1.5E-35 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 SUPERFAMILY SSF52210 123 287 1.57E-55 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 42.205 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 7.1E-36 T 13-10-2018 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 7.1E-36 T 13-10-2018 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 7.1E-36 T 13-10-2018 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 7.1E-36 T 13-10-2018 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 13-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 8.7E-140 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 Pfam PF00549 CoA-ligase 151 270 3.6E-17 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 SUPERFAMILY SSF51735 1 122 2.21E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 Gene3D G3DSA:3.40.50.261 124 288 5.8E-71 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 Gene3D G3DSA:3.40.50.720 2 123 5.4E-50 T 13-10-2018 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 PIRSF PIRSF001553 1 290 5.3E-128 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atc_2437 9d324b3f242d64eb52e8b7df9e58b3c9 290 Pfam PF02629 CoA binding domain 7 99 9.3E-31 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Atc_m009 23129faa06121c4084441282d57cf00c 510 SUPERFAMILY SSF53098 160 303 1.82E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_m009 23129faa06121c4084441282d57cf00c 510 Pfam PF00665 Integrase core domain 160 273 8.1E-10 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_m009 23129faa06121c4084441282d57cf00c 510 Gene3D G3DSA:3.30.420.10 169 313 2.0E-10 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_m009 23129faa06121c4084441282d57cf00c 510 ProDom PD043187 TRANSPOSASE PLASMID CATALYTIC INTEGRASE DNA-BINDING DNA TRANSPOSITION RECOMBINATION FOR INSERTION 393 486 6.0E-9 T 13-10-2018 Atc_2568 588d7de43d10b2df1a6a6926b3d28d38 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 118 2.1E-24 T 13-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2568 588d7de43d10b2df1a6a6926b3d28d38 119 Gene3D G3DSA:1.20.58.1610 1 119 1.1E-28 T 13-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0224 7168b2300159bfeb9e8cd29280691ca5 516 Pfam PF13440 Polysaccharide biosynthesis protein 53 345 1.0E-19 T 13-10-2018 Atc_0224 7168b2300159bfeb9e8cd29280691ca5 516 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 360 465 3.7E-7 T 13-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Atc_2839 01110718ec13581088eaa2f844ad97c6 310 SMART SM00382 32 212 3.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2839 01110718ec13581088eaa2f844ad97c6 310 Gene3D G3DSA:3.40.50.300 3 238 2.5E-62 T 13-10-2018 Atc_2839 01110718ec13581088eaa2f844ad97c6 310 SUPERFAMILY SSF52540 4 231 2.62E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2839 01110718ec13581088eaa2f844ad97c6 310 Pfam PF00005 ABC transporter 25 165 1.3E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_2839 01110718ec13581088eaa2f844ad97c6 310 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_m156 92a3ae0badf52f2b5c7512707938200f 338 SMART SM00945 82 187 2.7E-6 T 13-10-2018 IPR016103 ProQ/FinO domain Atc_m156 92a3ae0badf52f2b5c7512707938200f 338 Gene3D G3DSA:1.10.1710.10 65 174 2.5E-12 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily Atc_m156 92a3ae0badf52f2b5c7512707938200f 338 SUPERFAMILY SSF48657 83 173 2.35E-16 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily Atc_m156 92a3ae0badf52f2b5c7512707938200f 338 Pfam PF04352 ProQ/FINO family 84 181 8.5E-14 T 13-10-2018 IPR016103 ProQ/FinO domain Atc_2475 00627c737006b43dcf7d2801cbec2c45 437 Gene3D G3DSA:1.10.3710.10 338 435 2.2E-30 T 13-10-2018 Atc_2475 00627c737006b43dcf7d2801cbec2c45 437 SUPERFAMILY SSF48019 244 428 3.63E-68 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Atc_2475 00627c737006b43dcf7d2801cbec2c45 437 SMART SM00382 42 158 8.9E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2475 00627c737006b43dcf7d2801cbec2c45 437 SUPERFAMILY SSF52540 4 218 1.29E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2475 00627c737006b43dcf7d2801cbec2c45 437 Gene3D G3DSA:1.20.272.10 233 337 3.8E-41 T 13-10-2018 Atc_2475 00627c737006b43dcf7d2801cbec2c45 437 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 10 131 1.2E-18 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Atc_2475 00627c737006b43dcf7d2801cbec2c45 437 Pfam PF16193 AAA C-terminal domain 182 259 2.3E-19 T 13-10-2018 IPR032423 AAA C-terminal domain Atc_2475 00627c737006b43dcf7d2801cbec2c45 437 Gene3D G3DSA:3.40.50.300 2 156 1.8E-40 T 13-10-2018 Atc_2475 00627c737006b43dcf7d2801cbec2c45 437 Pfam PF12002 MgsA AAA+ ATPase C terminal 260 428 1.3E-63 T 13-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Atc_2475 00627c737006b43dcf7d2801cbec2c45 437 Gene3D G3DSA:1.10.8.60 158 231 3.3E-16 T 13-10-2018 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 350 4.5E-117 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 Pfam PF00391 PEP-utilising enzyme, mobile domain 391 462 6.1E-26 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 SUPERFAMILY SSF52009 359 474 1.57E-33 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 Gene3D G3DSA:3.20.20.60 485 796 1.4E-97 T 13-10-2018 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 488 795 2.3E-58 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 798 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 702 720 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 SUPERFAMILY SSF51621 470 799 4.71E-94 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 Gene3D G3DSA:3.30.470.20 195 363 1.4E-56 T 13-10-2018 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 PIRSF PIRSF000854 2 802 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 Gene3D G3DSA:3.50.30.10 364 472 7.1E-39 T 13-10-2018 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 SUPERFAMILY SSF56059 3 393 4.59E-106 T 13-10-2018 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 421 432 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Atc_1330 6b26fa44bdf0bfa859fef6a3561715f1 809 Gene3D G3DSA:3.30.1490.20 1 194 1.6E-69 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atc_0155 126556072b40e5611e2aad3241123642 161 Pfam PF00583 Acetyltransferase (GNAT) family 35 137 6.8E-17 T 13-10-2018 IPR000182 GNAT domain Atc_0155 126556072b40e5611e2aad3241123642 161 SUPERFAMILY SSF55729 11 144 5.23E-30 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atc_0155 126556072b40e5611e2aad3241123642 161 Gene3D G3DSA:3.40.630.30 6 146 3.2E-28 T 13-10-2018 Atc_1893 ac17418e48eb10a55c87ef09d8c203a8 149 Gene3D G3DSA:1.10.260.40 88 149 1.4E-22 T 13-10-2018 Atc_1893 ac17418e48eb10a55c87ef09d8c203a8 149 Pfam PF10387 Protein of unknown function (DUF2442) 9 81 2.2E-9 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Atc_1893 ac17418e48eb10a55c87ef09d8c203a8 149 Gene3D G3DSA:3.30.2020.10 2 87 1.6E-13 T 13-10-2018 IPR036782 NE0471-like, N-terminal Atc_1893 ac17418e48eb10a55c87ef09d8c203a8 149 SUPERFAMILY SSF47413 92 147 1.85E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_1893 ac17418e48eb10a55c87ef09d8c203a8 149 SUPERFAMILY SSF143880 5 87 3.14E-14 T 13-10-2018 IPR036782 NE0471-like, N-terminal Atc_1399 c5fa10c49b0ecb5caa376d92918dd2c5 201 Pfam PF00156 Phosphoribosyl transferase domain 61 157 2.9E-8 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atc_1399 c5fa10c49b0ecb5caa376d92918dd2c5 201 SUPERFAMILY SSF53271 12 168 1.26E-30 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Atc_1399 c5fa10c49b0ecb5caa376d92918dd2c5 201 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 201 24.843 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_1399 c5fa10c49b0ecb5caa376d92918dd2c5 201 Gene3D G3DSA:3.40.50.2020 10 200 3.1E-51 T 13-10-2018 Atc_1399 c5fa10c49b0ecb5caa376d92918dd2c5 201 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 11 198 4.0E-63 T 13-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0610 79a8c89c25356336d4c86a15b2a270a2 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.1E-40 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0610 79a8c89c25356336d4c86a15b2a270a2 110 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 6.0E-34 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Atc_0610 79a8c89c25356336d4c86a15b2a270a2 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.023 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0610 79a8c89c25356336d4c86a15b2a270a2 110 Gene3D G3DSA:3.90.470.10 2 110 9.0E-45 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Atc_0610 79a8c89c25356336d4c86a15b2a270a2 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0610 79a8c89c25356336d4c86a15b2a270a2 110 SUPERFAMILY SSF54843 3 109 2.62E-39 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Atc_1854 f6e48a87ab4549f71539d94f75ea270c 429 SUPERFAMILY SSF52540 91 376 1.76E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1854 f6e48a87ab4549f71539d94f75ea270c 429 Gene3D G3DSA:3.40.50.300 230 392 6.8E-48 T 13-10-2018 Atc_1854 f6e48a87ab4549f71539d94f75ea270c 429 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 170 178 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Atc_1854 f6e48a87ab4549f71539d94f75ea270c 429 SMART SM00490 275 356 2.0E-29 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_1854 f6e48a87ab4549f71539d94f75ea270c 429 Gene3D G3DSA:3.40.50.300 5 227 9.9E-79 T 13-10-2018 Atc_1854 f6e48a87ab4549f71539d94f75ea270c 429 Pfam PF00271 Helicase conserved C-terminal domain 250 356 9.6E-26 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_1854 f6e48a87ab4549f71539d94f75ea270c 429 SMART SM00487 37 239 7.4E-63 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_1854 f6e48a87ab4549f71539d94f75ea270c 429 Pfam PF00270 DEAD/DEAH box helicase 42 211 1.1E-50 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atc_2795 e2a732531c0fb24a4cbae564e0fd91eb 166 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 13-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 Atc_2795 e2a732531c0fb24a4cbae564e0fd91eb 166 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 46.378 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atc_2795 e2a732531c0fb24a4cbae564e0fd91eb 166 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 1.3E-52 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atc_2795 e2a732531c0fb24a4cbae564e0fd91eb 166 Gene3D G3DSA:3.30.420.10 3 157 3.2E-47 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_2795 e2a732531c0fb24a4cbae564e0fd91eb 166 SUPERFAMILY SSF53098 1 156 9.48E-49 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_2795 e2a732531c0fb24a4cbae564e0fd91eb 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.5E-36 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atc_2795 e2a732531c0fb24a4cbae564e0fd91eb 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.5E-36 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atc_2795 e2a732531c0fb24a4cbae564e0fd91eb 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.5E-36 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atc_2795 e2a732531c0fb24a4cbae564e0fd91eb 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.5E-36 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atc_2795 e2a732531c0fb24a4cbae564e0fd91eb 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.5E-36 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atc_2795 e2a732531c0fb24a4cbae564e0fd91eb 166 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 153 1.2E-52 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atc_2331 8bb37bd330aaab985a9f03562dc84c06 386 Pfam PF00850 Histone deacetylase domain 37 317 4.6E-60 T 13-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Atc_2331 8bb37bd330aaab985a9f03562dc84c06 386 SUPERFAMILY SSF52768 17 330 2.78E-84 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily Atc_2331 8bb37bd330aaab985a9f03562dc84c06 386 PRINTS PR01270 Histone deacetylase superfamily signature 252 262 6.5E-19 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Atc_2331 8bb37bd330aaab985a9f03562dc84c06 386 PRINTS PR01270 Histone deacetylase superfamily signature 170 185 6.5E-19 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Atc_2331 8bb37bd330aaab985a9f03562dc84c06 386 PRINTS PR01270 Histone deacetylase superfamily signature 138 161 6.5E-19 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Atc_2331 8bb37bd330aaab985a9f03562dc84c06 386 Gene3D G3DSA:3.40.800.20 12 380 4.2E-101 T 13-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Atc_2331 8bb37bd330aaab985a9f03562dc84c06 386 PRINTS PR01271 Histone deacetylase signature 213 226 3.4E-7 T 13-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 Atc_2331 8bb37bd330aaab985a9f03562dc84c06 386 PRINTS PR01271 Histone deacetylase signature 66 84 3.4E-7 T 13-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 Atc_2331 8bb37bd330aaab985a9f03562dc84c06 386 PRINTS PR01271 Histone deacetylase signature 230 248 3.4E-7 T 13-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 Atc_2331 8bb37bd330aaab985a9f03562dc84c06 386 PRINTS PR01271 Histone deacetylase signature 157 173 3.4E-7 T 13-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 Atc_2331 8bb37bd330aaab985a9f03562dc84c06 386 PRINTS PR01271 Histone deacetylase signature 33 50 3.4E-7 T 13-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 Atc_0413 e8564ff4df89335ec1621cb2f7222b4c 442 Gene3D G3DSA:3.40.350.10 8 174 1.8E-52 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atc_0413 e8564ff4df89335ec1621cb2f7222b4c 442 SUPERFAMILY SSF55920 178 438 1.18E-82 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Atc_0413 e8564ff4df89335ec1621cb2f7222b4c 442 Pfam PF05195 Aminopeptidase P, N-terminal domain 11 126 4.0E-38 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Atc_0413 e8564ff4df89335ec1621cb2f7222b4c 442 Pfam PF00557 Metallopeptidase family M24 183 417 3.4E-65 T 13-10-2018 IPR000994 Peptidase M24 Atc_0413 e8564ff4df89335ec1621cb2f7222b4c 442 SMART SM01011 6 139 8.0E-60 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Atc_0413 e8564ff4df89335ec1621cb2f7222b4c 442 SUPERFAMILY SSF53092 9 177 5.75E-50 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atc_0413 e8564ff4df89335ec1621cb2f7222b4c 442 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 351 363 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Atc_0413 e8564ff4df89335ec1621cb2f7222b4c 442 Gene3D G3DSA:3.90.230.10 177 440 6.9E-98 T 13-10-2018 Atc_1227 f7d8f8de3eeeae1af3609dbde0578602 296 SUPERFAMILY SSF52833 150 276 3.2E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1227 f7d8f8de3eeeae1af3609dbde0578602 296 Gene3D G3DSA:3.40.30.10 147 282 2.0E-25 T 13-10-2018 Atc_1227 f7d8f8de3eeeae1af3609dbde0578602 296 Pfam PF13098 Thioredoxin-like domain 147 274 3.8E-10 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_0462 66aa10b57fa95efe3ca82164e9807dc9 203 Gene3D G3DSA:2.50.20.10 32 199 1.5E-38 T 13-10-2018 Atc_0462 66aa10b57fa95efe3ca82164e9807dc9 203 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 3 199 19.928 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Atc_0462 66aa10b57fa95efe3ca82164e9807dc9 203 SUPERFAMILY SSF89392 19 199 9.81E-34 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Atc_0462 66aa10b57fa95efe3ca82164e9807dc9 203 Pfam PF03550 Outer membrane lipoprotein LolB 48 197 7.8E-37 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Atc_0462 66aa10b57fa95efe3ca82164e9807dc9 203 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 198 2.2E-24 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Atc_1949 8d279a46e8f6ec4190c5331ada0416dc 178 Pfam PF05598 Transposase domain (DUF772) 1 64 2.7E-13 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1253 13f3111ed0f3fe62f8e880a84a973256 89 Gene3D G3DSA:1.10.260.40 1 88 4.0E-22 T 13-10-2018 Atc_1253 13f3111ed0f3fe62f8e880a84a973256 89 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 1 71 2.4E-23 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 Atc_1253 13f3111ed0f3fe62f8e880a84a973256 89 SUPERFAMILY SSF47413 4 73 4.96E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_1253 13f3111ed0f3fe62f8e880a84a973256 89 Pfam PF01381 Helix-turn-helix 5 55 1.1E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atc_1253 13f3111ed0f3fe62f8e880a84a973256 89 SMART SM00530 4 56 5.2E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atc_1475 2673dd755636c177f449b019d7db3b55 524 Pfam PF07196 Flagellin hook IN motif 277 338 4.7E-5 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Atc_1475 2673dd755636c177f449b019d7db3b55 524 Pfam PF00700 Bacterial flagellin C-terminal helical region 438 523 5.3E-14 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atc_1475 2673dd755636c177f449b019d7db3b55 524 Gene3D G3DSA:2.30.220.10 195 294 1.5E-109 T 13-10-2018 Atc_1475 2673dd755636c177f449b019d7db3b55 524 PRINTS PR00207 Flagellin signature 39 56 2.4E-13 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atc_1475 2673dd755636c177f449b019d7db3b55 524 PRINTS PR00207 Flagellin signature 113 136 2.4E-13 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atc_1475 2673dd755636c177f449b019d7db3b55 524 PRINTS PR00207 Flagellin signature 78 97 2.4E-13 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atc_1475 2673dd755636c177f449b019d7db3b55 524 Gene3D G3DSA:1.20.1330.10 47 483 1.5E-109 T 13-10-2018 Atc_1475 2673dd755636c177f449b019d7db3b55 524 Gene3D G3DSA:2.170.280.10 180 431 1.5E-109 T 13-10-2018 Atc_1475 2673dd755636c177f449b019d7db3b55 524 Gene3D G3DSA:1.20.58.1830 7 523 1.5E-109 T 13-10-2018 Atc_1475 2673dd755636c177f449b019d7db3b55 524 Pfam PF00669 Bacterial flagellin N-terminal helical region 7 144 1.2E-30 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atc_1475 2673dd755636c177f449b019d7db3b55 524 SUPERFAMILY SSF64518 7 523 1.7E-76 T 13-10-2018 Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 Pfam PF02355 Protein export membrane protein 415 581 7.2E-24 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 PRINTS PR00702 Acriflavin resistance protein family signature 482 506 7.7E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 PRINTS PR00702 Acriflavin resistance protein family signature 429 452 7.7E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 PRINTS PR00702 Acriflavin resistance protein family signature 557 580 7.7E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 Gene3D G3DSA:1.20.1640.10 413 577 1.8E-14 T 13-10-2018 Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 594 47.336 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 Pfam PF07549 SecD/SecF GG Motif 112 138 5.2E-7 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 SUPERFAMILY SSF82866 390 580 2.88E-42 T 13-10-2018 Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 Gene3D G3DSA:3.30.70.3400 216 412 1.6E-63 T 13-10-2018 Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 Pfam PF13721 SecD export protein N-terminal TM region 1 98 1.1E-20 T 13-10-2018 IPR027398 SecD export protein N-terminal TM domain Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 120 580 2.1E-146 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 343 572 2.9E-81 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atc_2160 fdd730d1b9d8be949ff4789e9a3d0644 594 Gene3D G3DSA:3.30.1360.200 275 411 1.6E-63 T 13-10-2018 Atc_0907 be89fdc022eea8ede03ddbd52d3d55b6 331 Gene3D G3DSA:3.40.1750.20 188 252 4.1E-38 T 13-10-2018 Atc_0907 be89fdc022eea8ede03ddbd52d3d55b6 331 Pfam PF01343 Peptidase family S49 148 293 1.2E-40 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Atc_0907 be89fdc022eea8ede03ddbd52d3d55b6 331 Gene3D G3DSA:3.90.226.10 121 290 4.1E-38 T 13-10-2018 Atc_0907 be89fdc022eea8ede03ddbd52d3d55b6 331 Pfam PF08496 Peptidase family S49 N-terminal 1 144 6.0E-42 T 13-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 Atc_0907 be89fdc022eea8ede03ddbd52d3d55b6 331 SUPERFAMILY SSF52096 87 284 3.73E-26 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atc_2400 612a8ff1107629b0bcecf9a365b36bf5 184 Gene3D G3DSA:3.40.80.10 5 182 2.5E-55 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Atc_2400 612a8ff1107629b0bcecf9a365b36bf5 184 SUPERFAMILY SSF55846 6 179 1.44E-58 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Atc_2400 612a8ff1107629b0bcecf9a365b36bf5 184 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 171 4.3E-25 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Atc_2400 612a8ff1107629b0bcecf9a365b36bf5 184 SMART SM00644 21 170 4.3E-44 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 SMART SM01192 138 424 1.2E-216 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 Hamap MF_00318 Enolase [eno]. 2 410 43.741 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 PRINTS PR00148 Enolase signature 106 122 1.0E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 PRINTS PR00148 Enolase signature 310 321 1.0E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 PRINTS PR00148 Enolase signature 333 347 1.0E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 PRINTS PR00148 Enolase signature 160 173 1.0E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 PRINTS PR00148 Enolase signature 362 379 1.0E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 PRINTS PR00148 Enolase signature 37 51 1.0E-43 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 424 1.5E-201 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 ProSitePatterns PS00164 Enolase signature. 333 346 - T 13-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 SUPERFAMILY SSF54826 3 136 2.21E-51 T 13-10-2018 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 Gene3D G3DSA:3.20.20.120 127 426 9.5E-129 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 Pfam PF03952 Enolase, N-terminal domain 4 133 1.5E-56 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 SUPERFAMILY SSF51604 139 425 4.35E-126 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 SMART SM01193 4 133 2.9E-87 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 Gene3D G3DSA:3.30.390.10 1 126 8.1E-53 T 13-10-2018 IPR029017 Enolase-like, N-terminal Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 PIRSF PIRSF001400 1 424 1.8E-183 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1827 d87656b2c8f65a4f92a0ca2941360857 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 419 2.0E-126 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_1594 84e7279cfc588d906563834f805e3a48 439 SUPERFAMILY SSF47384 200 274 9.42E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_1594 84e7279cfc588d906563834f805e3a48 439 Gene3D G3DSA:1.10.287.130 159 270 2.8E-16 T 13-10-2018 Atc_1594 84e7279cfc588d906563834f805e3a48 439 Gene3D G3DSA:3.30.565.10 285 428 2.2E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1594 84e7279cfc588d906563834f805e3a48 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 274 3.3E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_1594 84e7279cfc588d906563834f805e3a48 439 SMART SM00387 320 423 1.3E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_1594 84e7279cfc588d906563834f805e3a48 439 SMART SM00388 216 276 1.7E-4 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_1594 84e7279cfc588d906563834f805e3a48 439 SUPERFAMILY SSF55874 310 423 2.1E-18 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1594 84e7279cfc588d906563834f805e3a48 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 420 5.2E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0216 9e7f1d051f7b575f28ca7353eda1a497 520 Pfam PF03050 Transposase IS66 family 175 455 9.4E-87 T 13-10-2018 IPR004291 Transposase, IS66 Atc_0216 9e7f1d051f7b575f28ca7353eda1a497 520 Pfam PF13007 Transposase C of IS166 homeodomain 32 92 4.2E-11 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain Atc_0216 9e7f1d051f7b575f28ca7353eda1a497 520 Pfam PF13817 IS66 C-terminal element 462 498 1.8E-11 T 13-10-2018 IPR039552 Transposase IS66, C-terminal Atc_1801 9e7f1d051f7b575f28ca7353eda1a497 520 Pfam PF03050 Transposase IS66 family 175 455 9.4E-87 T 13-10-2018 IPR004291 Transposase, IS66 Atc_1801 9e7f1d051f7b575f28ca7353eda1a497 520 Pfam PF13007 Transposase C of IS166 homeodomain 32 92 4.2E-11 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain Atc_1801 9e7f1d051f7b575f28ca7353eda1a497 520 Pfam PF13817 IS66 C-terminal element 462 498 1.8E-11 T 13-10-2018 IPR039552 Transposase IS66, C-terminal Atc_1972 3f74e5a436dcf2e91d3426315791dfbd 307 Pfam PF01063 Amino-transferase class IV 36 267 4.8E-54 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Atc_1972 3f74e5a436dcf2e91d3426315791dfbd 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 1.3E-131 T 13-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Atc_1972 3f74e5a436dcf2e91d3426315791dfbd 307 SUPERFAMILY SSF56752 1 303 1.7E-103 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Atc_1972 3f74e5a436dcf2e91d3426315791dfbd 307 Gene3D G3DSA:3.30.470.10 2 129 4.8E-40 T 13-10-2018 Atc_1972 3f74e5a436dcf2e91d3426315791dfbd 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Atc_1972 3f74e5a436dcf2e91d3426315791dfbd 307 Gene3D G3DSA:3.20.10.10 130 295 3.5E-55 T 13-10-2018 Atc_2344 a18fe70945b223d7189ff54cc3d95d1a 145 SUPERFAMILY SSF51230 12 121 2.88E-30 T 13-10-2018 IPR011053 Single hybrid motif Atc_2344 a18fe70945b223d7189ff54cc3d95d1a 145 Pfam PF01597 Glycine cleavage H-protein 15 130 2.6E-38 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Atc_2344 a18fe70945b223d7189ff54cc3d95d1a 145 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 55 84 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Atc_2344 a18fe70945b223d7189ff54cc3d95d1a 145 Gene3D G3DSA:2.40.50.100 7 136 2.7E-36 T 13-10-2018 Atc_2344 a18fe70945b223d7189ff54cc3d95d1a 145 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 10 135 32.147 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Atc_0860 bc3496301eefcf7019f45ffc04ca41a0 441 SUPERFAMILY SSF56037 340 411 5.49E-11 T 13-10-2018 Atc_0860 bc3496301eefcf7019f45ffc04ca41a0 441 SUPERFAMILY SSF82829 226 298 1.44E-5 T 13-10-2018 Atc_0860 bc3496301eefcf7019f45ffc04ca41a0 441 Gene3D G3DSA:3.40.50.620 1 206 5.2E-57 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0860 bc3496301eefcf7019f45ffc04ca41a0 441 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 1 177 1.0E-42 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Atc_0860 bc3496301eefcf7019f45ffc04ca41a0 441 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 357 393 2.2E-8 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Atc_0860 bc3496301eefcf7019f45ffc04ca41a0 441 SMART SM00977 349 419 1.6E-6 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Atc_0860 bc3496301eefcf7019f45ffc04ca41a0 441 Pfam PF11734 TilS substrate C-terminal domain 361 408 2.6E-9 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Atc_0860 bc3496301eefcf7019f45ffc04ca41a0 441 SUPERFAMILY SSF52402 1 200 1.81E-48 T 13-10-2018 Atc_0860 bc3496301eefcf7019f45ffc04ca41a0 441 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 288 18.943 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Atc_0860 bc3496301eefcf7019f45ffc04ca41a0 441 Pfam PF01171 PP-loop family 1 173 6.8E-44 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Atc_2574 16313bd4d15c4fe232627a070cd35f4b 320 Pfam PF00146 NADH dehydrogenase 11 308 5.1E-116 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2574 16313bd4d15c4fe232627a070cd35f4b 320 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 2 315 24.286 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2574 16313bd4d15c4fe232627a070cd35f4b 320 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 203 216 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2529 34724d62f744bf106ce313de60226410 374 PIRSF PIRSF000355 28 374 1.2E-131 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2529 34724d62f744bf106ce313de60226410 374 SUPERFAMILY SSF47240 38 345 3.86E-94 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_2529 34724d62f744bf106ce313de60226410 374 Pfam PF00268 Ribonucleotide reductase, small chain 54 337 5.5E-81 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2529 34724d62f744bf106ce313de60226410 374 Gene3D G3DSA:1.10.620.20 28 367 2.7E-112 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Atc_2647 8bc70484cf4b7d96c60d48df92df7830 206 SUPERFAMILY SSF52833 11 110 3.4E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2647 8bc70484cf4b7d96c60d48df92df7830 206 Gene3D G3DSA:1.20.1050.10 89 191 8.0E-73 T 13-10-2018 Atc_2647 8bc70484cf4b7d96c60d48df92df7830 206 SUPERFAMILY SSF47616 82 203 5.01E-25 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atc_2647 8bc70484cf4b7d96c60d48df92df7830 206 Pfam PF13410 Glutathione S-transferase, C-terminal domain 124 187 3.5E-10 T 13-10-2018 Atc_2647 8bc70484cf4b7d96c60d48df92df7830 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 5.4E-19 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atc_2647 8bc70484cf4b7d96c60d48df92df7830 206 Gene3D G3DSA:3.40.30.10 11 199 8.0E-73 T 13-10-2018 Atc_2802 42f30181907d5b0a646c36750cd8624b 424 Gene3D G3DSA:2.120.10.30 164 424 6.1E-82 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atc_2802 42f30181907d5b0a646c36750cd8624b 424 SUPERFAMILY SSF52964 31 160 1.83E-28 T 13-10-2018 Atc_2802 42f30181907d5b0a646c36750cd8624b 424 Pfam PF04052 TolB amino-terminal domain 26 128 1.2E-20 T 13-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 Atc_2802 42f30181907d5b0a646c36750cd8624b 424 Pfam PF07676 WD40-like Beta Propeller Repeat 199 217 0.015 T 13-10-2018 IPR011659 WD40-like Beta Propeller Atc_2802 42f30181907d5b0a646c36750cd8624b 424 Pfam PF07676 WD40-like Beta Propeller Repeat 277 311 5.3E-13 T 13-10-2018 IPR011659 WD40-like Beta Propeller Atc_2802 42f30181907d5b0a646c36750cd8624b 424 Pfam PF07676 WD40-like Beta Propeller Repeat 243 268 4.4E-4 T 13-10-2018 IPR011659 WD40-like Beta Propeller Atc_2802 42f30181907d5b0a646c36750cd8624b 424 SUPERFAMILY SSF69304 165 423 1.96E-51 T 13-10-2018 Atc_2802 42f30181907d5b0a646c36750cd8624b 424 Gene3D G3DSA:3.40.50.10070 22 163 1.8E-34 T 13-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 Atc_2802 42f30181907d5b0a646c36750cd8624b 424 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 18 423 1.2E-143 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Atc_2802 42f30181907d5b0a646c36750cd8624b 424 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 7 422 40.97 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Atc_0498 da075be0da649c3811ba4f60a96f3522 612 Pfam PF03880 DbpA RNA binding domain 486 554 4.6E-17 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Atc_0498 da075be0da649c3811ba4f60a96f3522 612 SMART SM00487 26 224 1.1E-61 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_0498 da075be0da649c3811ba4f60a96f3522 612 Gene3D G3DSA:3.40.50.300 217 434 2.6E-52 T 13-10-2018 Atc_0498 da075be0da649c3811ba4f60a96f3522 612 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 557 44.655 T 13-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 Atc_0498 da075be0da649c3811ba4f60a96f3522 612 SMART SM00490 260 341 4.7E-32 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_0498 da075be0da649c3811ba4f60a96f3522 612 SUPERFAMILY SSF52540 76 362 7.12E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0498 da075be0da649c3811ba4f60a96f3522 612 Pfam PF00271 Helicase conserved C-terminal domain 233 341 9.6E-29 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_0498 da075be0da649c3811ba4f60a96f3522 612 Pfam PF00270 DEAD/DEAH box helicase 32 196 8.2E-47 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atc_0498 da075be0da649c3811ba4f60a96f3522 612 Gene3D G3DSA:3.30.70.330 486 557 3.0E-8 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Atc_0498 da075be0da649c3811ba4f60a96f3522 612 Gene3D G3DSA:3.40.50.300 2 212 8.4E-72 T 13-10-2018 Atc_0498 da075be0da649c3811ba4f60a96f3522 612 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Atc_2426 ca219ab6eb727222d2a2092f775ca4c5 171 Hamap MF_00163 Peptide deformylase [def]. 2 167 27.36 T 13-10-2018 IPR023635 Peptide deformylase Atc_2426 ca219ab6eb727222d2a2092f775ca4c5 171 PRINTS PR01576 Peptide deformylase signature 106 124 1.3E-25 T 13-10-2018 IPR023635 Peptide deformylase Atc_2426 ca219ab6eb727222d2a2092f775ca4c5 171 PRINTS PR01576 Peptide deformylase signature 94 105 1.3E-25 T 13-10-2018 IPR023635 Peptide deformylase Atc_2426 ca219ab6eb727222d2a2092f775ca4c5 171 PRINTS PR01576 Peptide deformylase signature 125 154 1.3E-25 T 13-10-2018 IPR023635 Peptide deformylase Atc_2426 ca219ab6eb727222d2a2092f775ca4c5 171 PRINTS PR01576 Peptide deformylase signature 34 63 1.3E-25 T 13-10-2018 IPR023635 Peptide deformylase Atc_2426 ca219ab6eb727222d2a2092f775ca4c5 171 SUPERFAMILY SSF56420 2 166 2.88E-53 T 13-10-2018 IPR036821 Peptide deformylase superfamily Atc_2426 ca219ab6eb727222d2a2092f775ca4c5 171 Pfam PF01327 Polypeptide deformylase 4 156 8.3E-47 T 13-10-2018 IPR023635 Peptide deformylase Atc_2426 ca219ab6eb727222d2a2092f775ca4c5 171 PIRSF PIRSF004749 1 171 9.8E-53 T 13-10-2018 IPR023635 Peptide deformylase Atc_2426 ca219ab6eb727222d2a2092f775ca4c5 171 Gene3D G3DSA:3.90.45.10 1 171 3.9E-52 T 13-10-2018 IPR036821 Peptide deformylase superfamily Atc_2426 ca219ab6eb727222d2a2092f775ca4c5 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 157 2.2E-43 T 13-10-2018 IPR023635 Peptide deformylase Atc_1024 0055fe87de7adf0ae4c0136c29559f2c 336 Gene3D G3DSA:1.10.443.10 171 334 4.3E-35 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_1024 0055fe87de7adf0ae4c0136c29559f2c 336 Gene3D G3DSA:1.10.150.130 60 170 7.5E-9 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_1024 0055fe87de7adf0ae4c0136c29559f2c 336 Pfam PF00589 Phage integrase family 171 324 8.4E-27 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_1024 0055fe87de7adf0ae4c0136c29559f2c 336 SUPERFAMILY SSF56349 65 331 1.22E-56 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 363 372 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 236 251 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 174 187 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 Gene3D G3DSA:3.40.50.2300 9 142 1.5E-38 T 13-10-2018 Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 Gene3D G3DSA:3.40.50.300 143 321 4.6E-62 T 13-10-2018 Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 Gene3D G3DSA:1.10.10.60 401 454 8.0E-14 T 13-10-2018 Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 SUPERFAMILY SSF52172 10 194 2.42E-43 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 Pfam PF00072 Response regulator receiver domain 13 122 1.6E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 SUPERFAMILY SSF52540 151 392 2.21E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 SUPERFAMILY SSF46689 363 452 1.7E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 SMART SM00382 170 313 6.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 SMART SM00448 11 122 2.4E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 Pfam PF02954 Bacterial regulatory protein, Fis family 412 450 6.2E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 Gene3D G3DSA:1.10.8.60 322 395 1.6E-21 T 13-10-2018 Atc_0394 f8f881bb734cdc1a1eea14e0dcebf0cf 466 Pfam PF00158 Sigma-54 interaction domain 151 316 6.7E-66 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_2194 f94f90517ce9c54980febede569b516a 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 321 1.1E-21 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_2194 f94f90517ce9c54980febede569b516a 346 SUPERFAMILY SSF111369 115 172 2.88E-5 T 13-10-2018 Atc_2194 f94f90517ce9c54980febede569b516a 346 Gene3D G3DSA:1.10.287.470 79 98 3.8E-10 T 13-10-2018 Atc_2194 f94f90517ce9c54980febede569b516a 346 Gene3D G3DSA:2.40.50.100 187 236 2.0E-8 T 13-10-2018 Atc_2194 f94f90517ce9c54980febede569b516a 346 Gene3D G3DSA:2.40.30.170 237 329 1.4E-16 T 13-10-2018 Atc_2194 f94f90517ce9c54980febede569b516a 346 SUPERFAMILY SSF111369 153 328 8.76E-13 T 13-10-2018 Atc_2194 f94f90517ce9c54980febede569b516a 346 Gene3D G3DSA:1.10.287.470 105 176 7.0E-9 T 13-10-2018 Atc_2194 f94f90517ce9c54980febede569b516a 346 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 57 77 2.2E-6 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atc_2194 f94f90517ce9c54980febede569b516a 346 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 317 332 2.2E-6 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atc_2194 f94f90517ce9c54980febede569b516a 346 Gene3D G3DSA:2.40.50.100 45 78 3.8E-10 T 13-10-2018 Atc_2194 f94f90517ce9c54980febede569b516a 346 SUPERFAMILY SSF111369 52 98 2.22E-5 T 13-10-2018 Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 SMART SM00853 431 566 1.8E-35 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 Gene3D G3DSA:3.30.565.10 5 218 1.4E-60 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 216 331 5.9E-37 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 4 606 26.358 T 13-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 5 311 2.7E-92 T 13-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 96 102 - T 13-10-2018 IPR014762 DNA mismatch repair, conserved site Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 Gene3D G3DSA:3.30.230.10 219 331 2.1E-35 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 SUPERFAMILY SSF54211 211 331 2.28E-34 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 Gene3D G3DSA:3.30.1370.100 471 563 3.0E-50 T 13-10-2018 Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 SUPERFAMILY SSF55874 4 201 2.1E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 SUPERFAMILY SSF118116 427 608 2.62E-50 T 13-10-2018 IPR037198 MutL, C-terminal domain superfamily Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 116 8.5E-8 T 13-10-2018 Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 SMART SM01340 214 332 1.6E-56 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 Gene3D G3DSA:2.30.42.20 432 608 3.0E-50 T 13-10-2018 Atc_1310 62e2565d24084ab4176170914ac0cc8a 610 Pfam PF08676 MutL C terminal dimerisation domain 427 566 8.7E-34 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 SUPERFAMILY SSF82693 155 352 7.59E-7 T 13-10-2018 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 Gene3D G3DSA:1.20.1640.10 537 592 3.7E-168 T 13-10-2018 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 SUPERFAMILY SSF82714 203 283 2.49E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 SUPERFAMILY SSF82866 319 520 4.05E-38 T 13-10-2018 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 SUPERFAMILY SSF82693 60 152 4.88E-21 T 13-10-2018 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 SUPERFAMILY SSF82714 756 836 5.89E-8 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 Gene3D G3DSA:1.20.1640.10 37 536 3.7E-168 T 13-10-2018 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 Gene3D G3DSA:3.30.70.1430 60 850 3.7E-168 T 13-10-2018 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 Gene3D G3DSA:3.30.2090.10 752 842 3.7E-168 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 PRINTS PR00702 Acriflavin resistance protein family signature 30 54 8.5E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 PRINTS PR00702 Acriflavin resistance protein family signature 58 76 8.5E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 PRINTS PR00702 Acriflavin resistance protein family signature 414 438 8.5E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 PRINTS PR00702 Acriflavin resistance protein family signature 493 516 8.5E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 PRINTS PR00702 Acriflavin resistance protein family signature 386 407 8.5E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 8.5E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 Gene3D G3DSA:3.30.70.1430 593 703 3.7E-168 T 13-10-2018 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 SUPERFAMILY SSF82693 590 704 4.71E-9 T 13-10-2018 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 Gene3D G3DSA:3.30.70.1440 704 862 3.7E-168 T 13-10-2018 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 Pfam PF00873 AcrB/AcrD/AcrF family 25 861 1.2E-109 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 Gene3D G3DSA:3.30.70.1320 154 354 3.7E-168 T 13-10-2018 Atc_0794 d23d3b4a29d105884b51b16a8c080317 910 Gene3D G3DSA:3.30.2090.10 198 289 3.7E-168 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_1829 134b21b0232169236c75468d5649080d 534 Gene3D G3DSA:3.40.50.300 1 272 3.2E-119 T 13-10-2018 Atc_1829 134b21b0232169236c75468d5649080d 534 Pfam PF00117 Glutamine amidotransferase class-I 289 523 4.9E-53 T 13-10-2018 IPR017926 Glutamine amidotransferase Atc_1829 134b21b0232169236c75468d5649080d 534 Pfam PF06418 CTP synthase N-terminus 1 254 3.6E-114 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Atc_1829 134b21b0232169236c75468d5649080d 534 Gene3D G3DSA:3.40.50.880 274 533 3.5E-98 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_1829 134b21b0232169236c75468d5649080d 534 SUPERFAMILY SSF52317 277 531 2.69E-82 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_1829 134b21b0232169236c75468d5649080d 534 SUPERFAMILY SSF52540 1 254 7.59E-112 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1829 134b21b0232169236c75468d5649080d 534 TIGRFAM TIGR00337 PyrG: CTP synthase 1 524 1.1E-228 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Atc_1829 134b21b0232169236c75468d5649080d 534 Hamap MF_01227 CTP synthase [pyrG]. 1 529 48.185 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 Gene3D G3DSA:3.40.50.720 1 248 1.1E-86 T 13-10-2018 Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.1E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.1E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.1E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 SUPERFAMILY SSF51735 8 248 6.71E-84 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 1.4E-65 T 13-10-2018 Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 192 4.5E-7 T 13-10-2018 Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1016 2184d7c2f6e349c8148871b2a8045097 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 12 246 9.2E-95 T 13-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atc_1983 830c853261f9eae33ca6d9c7f46d4a80 85 Pfam PF13711 Domain of unknown function (DUF4160) 9 70 2.1E-18 T 13-10-2018 IPR025427 Protein of unknown function DUF4160 Atc_2162 72d2beaa1e542f1232fb2191d1cb691e 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 359 2.4E-85 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atc_2162 72d2beaa1e542f1232fb2191d1cb691e 375 SUPERFAMILY SSF51713 3 362 6.54E-150 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atc_2162 72d2beaa1e542f1232fb2191d1cb691e 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 366 2.7E-150 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atc_2162 72d2beaa1e542f1232fb2191d1cb691e 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 362 54.356 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atc_2162 72d2beaa1e542f1232fb2191d1cb691e 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 366 1.6E-156 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atc_2162 72d2beaa1e542f1232fb2191d1cb691e 375 Gene3D G3DSA:3.20.20.105 2 366 5.5E-154 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atc_0808 0b8f78dbc0b471dffe432b6a6f331e2c 182 Pfam PF00293 NUDIX domain 7 133 3.5E-23 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atc_0808 0b8f78dbc0b471dffe432b6a6f331e2c 182 Gene3D G3DSA:3.90.79.10 1 153 2.0E-40 T 13-10-2018 Atc_0808 0b8f78dbc0b471dffe432b6a6f331e2c 182 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.9E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atc_0808 0b8f78dbc0b471dffe432b6a6f331e2c 182 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.9E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atc_0808 0b8f78dbc0b471dffe432b6a6f331e2c 182 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 152 34.618 T 13-10-2018 IPR022927 RNA pyrophosphohydrolase RppH Atc_0808 0b8f78dbc0b471dffe432b6a6f331e2c 182 SUPERFAMILY SSF55811 3 147 2.84E-28 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atc_0808 0b8f78dbc0b471dffe432b6a6f331e2c 182 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atc_1381 47edb7f5b7ac41a185e8fb7d11a31902 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 310 5.1E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atc_1381 47edb7f5b7ac41a185e8fb7d11a31902 318 SUPERFAMILY SSF161098 24 305 1.44E-33 T 13-10-2018 IPR035906 MetI-like superfamily Atc_1381 47edb7f5b7ac41a185e8fb7d11a31902 318 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 6 314 1.2E-73 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Atc_1381 47edb7f5b7ac41a185e8fb7d11a31902 318 Gene3D G3DSA:1.10.3720.10 67 314 2.5E-33 T 13-10-2018 IPR035906 MetI-like superfamily Atc_0180 58e867323c92f9c4deb17c022557b8ba 116 SUPERFAMILY SSF50249 1 91 4.11E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0180 58e867323c92f9c4deb17c022557b8ba 116 Gene3D G3DSA:2.40.50.140 1 81 7.3E-20 T 13-10-2018 Atc_0180 58e867323c92f9c4deb17c022557b8ba 116 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 71 3.4E-20 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Atc_0180 58e867323c92f9c4deb17c022557b8ba 116 Pfam PF00436 Single-strand binding protein family 1 52 3.3E-17 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Atc_0180 58e867323c92f9c4deb17c022557b8ba 116 PIRSF PIRSF002070 1 89 5.2E-15 T 13-10-2018 Atc_0311 7f7defc001817107b48951318803f286 376 Gene3D G3DSA:3.40.50.1100 14 350 7.2E-115 T 13-10-2018 Atc_0311 7f7defc001817107b48951318803f286 376 TIGRFAM TIGR00260 thrC: threonine synthase 8 350 1.3E-88 T 13-10-2018 IPR004450 Threonine synthase-like Atc_0311 7f7defc001817107b48951318803f286 376 Gene3D G3DSA:3.40.50.1100 62 158 7.2E-115 T 13-10-2018 Atc_0311 7f7defc001817107b48951318803f286 376 PIRSF PIRSF038945 1 375 8.9E-152 T 13-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Atc_0311 7f7defc001817107b48951318803f286 376 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Atc_0311 7f7defc001817107b48951318803f286 376 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 343 1.0E-66 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Atc_0311 7f7defc001817107b48951318803f286 376 SUPERFAMILY SSF53686 6 374 2.49E-97 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Atc_2122 483756ed23efd0b3f8cf82f5c5db0b94 556 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 3 175 9.4E-30 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Atc_2122 483756ed23efd0b3f8cf82f5c5db0b94 556 SMART SM00470 1 89 3.5E-23 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_2122 483756ed23efd0b3f8cf82f5c5db0b94 556 Pfam PF02195 ParB-like nuclease domain 2 85 2.4E-17 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_2122 483756ed23efd0b3f8cf82f5c5db0b94 556 SUPERFAMILY SSF110849 2 133 7.85E-25 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atc_2122 483756ed23efd0b3f8cf82f5c5db0b94 556 TIGRFAM TIGR03734 PRTRC_parB: PRTRC system ParB family protein 8 556 8.0E-140 T 13-10-2018 IPR022396 ParB-related, ThiF-related cassette, ParB Atc_2122 483756ed23efd0b3f8cf82f5c5db0b94 556 Gene3D G3DSA:3.90.1530.30 13 75 3.4E-20 T 13-10-2018 Atc_2122 483756ed23efd0b3f8cf82f5c5db0b94 556 Gene3D G3DSA:1.10.10.2830 77 189 1.3E-16 T 13-10-2018 Atc_1235 7a376f953d586f7c1b1cb1ee56a23d93 198 Pfam PF01555 DNA methylase 24 175 1.8E-8 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Atc_1235 7a376f953d586f7c1b1cb1ee56a23d93 198 SUPERFAMILY SSF53335 3 176 5.95E-16 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1235 7a376f953d586f7c1b1cb1ee56a23d93 198 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 28 33 - T 13-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 Atc_0043 713cec6a512ed78dd609970029ba0a28 550 SUPERFAMILY SSF48452 107 291 3.98E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0043 713cec6a512ed78dd609970029ba0a28 550 SUPERFAMILY SSF48452 271 453 1.77E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0043 713cec6a512ed78dd609970029ba0a28 550 Gene3D G3DSA:1.25.40.10 106 180 6.8E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0043 713cec6a512ed78dd609970029ba0a28 550 Gene3D G3DSA:1.25.40.10 370 542 1.2E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0043 713cec6a512ed78dd609970029ba0a28 550 Pfam PF13429 Tetratricopeptide repeat 268 534 2.9E-44 T 13-10-2018 Atc_0043 713cec6a512ed78dd609970029ba0a28 550 Gene3D G3DSA:1.25.40.10 181 330 3.3E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2391 8e0453f4f40c524f930cad1a0cea9de8 298 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 4 285 7.7E-58 T 13-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 Atc_2391 8e0453f4f40c524f930cad1a0cea9de8 298 SUPERFAMILY SSF56059 98 287 6.54E-41 T 13-10-2018 Atc_2391 8e0453f4f40c524f930cad1a0cea9de8 298 Gene3D G3DSA:3.40.50.20 2 114 2.8E-20 T 13-10-2018 Atc_2391 8e0453f4f40c524f930cad1a0cea9de8 298 Gene3D G3DSA:3.30.1490.20 115 179 5.7E-15 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atc_2391 8e0453f4f40c524f930cad1a0cea9de8 298 Pfam PF08443 RimK-like ATP-grasp domain 97 286 1.0E-38 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Atc_2391 8e0453f4f40c524f930cad1a0cea9de8 298 Gene3D G3DSA:3.30.470.80 181 294 1.7E-33 T 13-10-2018 Atc_1041 f948a4ca7dddac6fb3ecc1a1830e7f8f 348 SUPERFAMILY SSF103190 58 117 1.73E-5 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Atc_1041 f948a4ca7dddac6fb3ecc1a1830e7f8f 348 Gene3D G3DSA:3.30.450.20 17 180 2.5E-5 T 13-10-2018 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 SUPERFAMILY SSF88946 15 123 8.11E-38 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 PRINTS PR00046 Major sigma-70 factor signature 230 242 3.1E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 PRINTS PR00046 Major sigma-70 factor signature 264 275 3.1E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 PRINTS PR00046 Major sigma-70 factor signature 78 91 3.1E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 PRINTS PR00046 Major sigma-70 factor signature 249 264 3.1E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 Gene3D G3DSA:1.10.601.10 6 123 2.0E-29 T 13-10-2018 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 Pfam PF04545 Sigma-70, region 4 226 276 5.7E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 Pfam PF04542 Sigma-70 region 2 54 123 1.1E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 279 9.6E-118 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 Gene3D G3DSA:1.20.140.160 142 281 6.2E-16 T 13-10-2018 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 PIRSF PIRSF000770 17 284 4.4E-32 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 SUPERFAMILY SSF88659 195 281 2.24E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0476 a462bfcabeeda146b384e59a2e3d2906 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 279 1.3E-30 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atc_2640 e4b48cf728f10b3f898472f1ab2bbf29 337 Pfam PF13692 Glycosyl transferases group 1 168 302 7.5E-22 T 13-10-2018 Atc_2640 e4b48cf728f10b3f898472f1ab2bbf29 337 Pfam PF13439 Glycosyltransferase Family 4 4 142 1.2E-9 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atc_2640 e4b48cf728f10b3f898472f1ab2bbf29 337 SUPERFAMILY SSF53756 3 334 1.4E-55 T 13-10-2018 Atc_2640 e4b48cf728f10b3f898472f1ab2bbf29 337 Gene3D G3DSA:3.40.50.2000 141 317 6.8E-44 T 13-10-2018 Atc_2640 e4b48cf728f10b3f898472f1ab2bbf29 337 Gene3D G3DSA:3.40.50.2000 6 140 6.8E-44 T 13-10-2018 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 27 162 1.4E-18 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 SUPERFAMILY SSF50447 270 402 1.17E-27 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 Pfam PF03144 Elongation factor Tu domain 2 323 387 8.5E-9 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 Gene3D G3DSA:3.40.50.300 120 284 3.5E-107 T 13-10-2018 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 Pfam PF16658 Class II release factor RF3, C-terminal domain 396 523 2.9E-44 T 13-10-2018 IPR032090 Peptide chain release factor 3, C-terminal Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 PRINTS PR00315 GTP-binding elongation factor signature 95 105 2.5E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 PRINTS PR00315 GTP-binding elongation factor signature 147 156 2.5E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 PRINTS PR00315 GTP-binding elongation factor signature 25 38 2.5E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 PRINTS PR00315 GTP-binding elongation factor signature 111 122 2.5E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 PRINTS PR00315 GTP-binding elongation factor signature 75 83 2.5E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 Gene3D G3DSA:3.30.70.3280 399 538 2.1E-48 T 13-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 17 538 2.9E-242 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 Gene3D G3DSA:3.40.50.300 82 388 3.5E-107 T 13-10-2018 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 68 83 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 SUPERFAMILY SSF54980 401 475 1.58E-17 T 13-10-2018 IPR035647 EF-G domain III/V-like Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 14 536 52.265 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 Pfam PF00009 Elongation factor Tu GTP binding domain 23 286 5.1E-48 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_2314 df5a730168c80a5d1f2ae35fd8bbe259 544 SUPERFAMILY SSF52540 20 286 2.16E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0165 46d5864999192ab0923ad51cc9487ac8 438 Pfam PF03743 Bacterial conjugation TrbI-like protein 219 405 5.0E-53 T 13-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Atc_0165 46d5864999192ab0923ad51cc9487ac8 438 Gene3D G3DSA:2.40.128.260 221 403 2.5E-54 T 13-10-2018 Atc_0165 46d5864999192ab0923ad51cc9487ac8 438 Gene3D G3DSA:1.10.1200.160 353 384 2.5E-54 T 13-10-2018 Atc_m091 6c1c551c2c14fb9bfd779f76d3f0661c 510 Pfam PF07690 Major Facilitator Superfamily 48 437 2.0E-36 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_m091 6c1c551c2c14fb9bfd779f76d3f0661c 510 Gene3D G3DSA:1.20.1250.20 41 226 3.5E-22 T 13-10-2018 Atc_m091 6c1c551c2c14fb9bfd779f76d3f0661c 510 Gene3D G3DSA:1.20.1250.20 286 496 7.4E-21 T 13-10-2018 Atc_m091 6c1c551c2c14fb9bfd779f76d3f0661c 510 SUPERFAMILY SSF103473 34 491 1.96E-56 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_1575 29b46de9dd94099e9972a185c2c32ce8 520 Pfam PF03050 Transposase IS66 family 175 455 8.1E-87 T 13-10-2018 IPR004291 Transposase, IS66 Atc_1575 29b46de9dd94099e9972a185c2c32ce8 520 Pfam PF13007 Transposase C of IS166 homeodomain 32 92 4.2E-11 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain Atc_1575 29b46de9dd94099e9972a185c2c32ce8 520 Pfam PF13817 IS66 C-terminal element 462 498 1.8E-11 T 13-10-2018 IPR039552 Transposase IS66, C-terminal Atc_1631 29b46de9dd94099e9972a185c2c32ce8 520 Pfam PF03050 Transposase IS66 family 175 455 8.1E-87 T 13-10-2018 IPR004291 Transposase, IS66 Atc_1631 29b46de9dd94099e9972a185c2c32ce8 520 Pfam PF13007 Transposase C of IS166 homeodomain 32 92 4.2E-11 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain Atc_1631 29b46de9dd94099e9972a185c2c32ce8 520 Pfam PF13817 IS66 C-terminal element 462 498 1.8E-11 T 13-10-2018 IPR039552 Transposase IS66, C-terminal Atc_0349 66033479ad43afc8a21dc6be582c350c 229 Gene3D G3DSA:3.10.20.400 3 99 3.8E-38 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Atc_0349 66033479ad43afc8a21dc6be582c350c 229 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 9 112 31.046 T 13-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Atc_0349 66033479ad43afc8a21dc6be582c350c 229 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 127 210 8.3E-31 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Atc_0349 66033479ad43afc8a21dc6be582c350c 229 SUPERFAMILY SSF101386 126 210 5.05E-24 T 13-10-2018 Atc_0349 66033479ad43afc8a21dc6be582c350c 229 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 11 215 35.826 T 13-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 Atc_0349 66033479ad43afc8a21dc6be582c350c 229 Gene3D G3DSA:1.10.287.1080 124 216 3.1E-30 T 13-10-2018 Atc_0349 66033479ad43afc8a21dc6be582c350c 229 SUPERFAMILY SSF141734 9 117 5.89E-46 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Atc_0349 66033479ad43afc8a21dc6be582c350c 229 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 35 108 1.4E-32 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Atc_0349 66033479ad43afc8a21dc6be582c350c 229 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 129 213 1.1E-15 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Atc_0349 66033479ad43afc8a21dc6be582c350c 229 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 58 108 5.0E-17 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Atc_0349 66033479ad43afc8a21dc6be582c350c 229 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 124 210 20.58 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Atc_2147 0dc38b70597ffe04b36b59cdb5250066 215 SUPERFAMILY SSF52540 9 190 3.26E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2147 0dc38b70597ffe04b36b59cdb5250066 215 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 181 1.6E-16 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_2147 0dc38b70597ffe04b36b59cdb5250066 215 Gene3D G3DSA:3.40.50.300 9 210 7.3E-35 T 13-10-2018 Atc_2147 0dc38b70597ffe04b36b59cdb5250066 215 PIRSF PIRSF009320 7 207 5.9E-26 T 13-10-2018 Atc_m160 b65b16f7d845393d4af576220b69f6c1 547 Pfam PF07282 Putative transposase DNA-binding domain 383 444 4.7E-6 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Atc_1252 b65b16f7d845393d4af576220b69f6c1 547 Pfam PF07282 Putative transposase DNA-binding domain 383 444 4.7E-6 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Atc_1295 b65b16f7d845393d4af576220b69f6c1 547 Pfam PF07282 Putative transposase DNA-binding domain 383 444 4.7E-6 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Atc_1195 b65b16f7d845393d4af576220b69f6c1 547 Pfam PF07282 Putative transposase DNA-binding domain 383 444 4.7E-6 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Atc_0971 ef6e4c8d27588733100d7722eff3fb86 239 Pfam PF01863 Protein of unknown function DUF45 29 234 1.8E-55 T 13-10-2018 IPR002725 Protein of unknown function DUF45 Atc_0971 ef6e4c8d27588733100d7722eff3fb86 239 Gene3D G3DSA:3.30.2010.10 143 235 2.0E-19 T 13-10-2018 Atc_0769 4d6df844bc47168b677a06aa6542c07e 855 Pfam PF13440 Polysaccharide biosynthesis protein 64 368 3.7E-13 T 13-10-2018 Atc_0769 4d6df844bc47168b677a06aa6542c07e 855 SUPERFAMILY SSF53448 537 767 1.88E-40 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0769 4d6df844bc47168b677a06aa6542c07e 855 Pfam PF00535 Glycosyl transferase family 2 541 653 5.6E-15 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atc_0769 4d6df844bc47168b677a06aa6542c07e 855 Gene3D G3DSA:3.90.550.10 502 783 3.0E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_3p19 32a0e23b1f382c92470a8e3921546090 164 Pfam PF00890 FAD binding domain 11 160 3.3E-15 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atc_3p19 32a0e23b1f382c92470a8e3921546090 164 Gene3D G3DSA:3.50.50.90 1 162 2.4E-37 T 13-10-2018 Atc_3p19 32a0e23b1f382c92470a8e3921546090 164 SUPERFAMILY SSF51905 7 160 5.98E-22 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1215 4cd3e85eaff650042ce63c609c4e6b7e 193 Pfam PF01464 Transglycosylase SLT domain 9 131 1.5E-14 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_1215 4cd3e85eaff650042ce63c609c4e6b7e 193 Gene3D G3DSA:1.10.530.10 4 155 2.1E-10 T 13-10-2018 Atc_1215 4cd3e85eaff650042ce63c609c4e6b7e 193 SUPERFAMILY SSF53955 16 144 1.13E-14 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_0576 779279865c207e331aebe38bc5fe122b 289 Pfam PF00085 Thioredoxin 7 109 1.8E-28 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Atc_0576 779279865c207e331aebe38bc5fe122b 289 Gene3D G3DSA:3.40.30.10 2 113 4.1E-34 T 13-10-2018 Atc_0576 779279865c207e331aebe38bc5fe122b 289 Gene3D G3DSA:1.25.40.10 205 289 2.8E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0576 779279865c207e331aebe38bc5fe122b 289 Pfam PF14559 Tetratricopeptide repeat 126 191 1.8E-8 T 13-10-2018 Atc_0576 779279865c207e331aebe38bc5fe122b 289 TIGRFAM TIGR01068 thioredoxin: thioredoxin 21 109 3.5E-29 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Atc_0576 779279865c207e331aebe38bc5fe122b 289 SUPERFAMILY SSF52833 7 113 2.48E-36 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0576 779279865c207e331aebe38bc5fe122b 289 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Atc_0576 779279865c207e331aebe38bc5fe122b 289 Pfam PF14561 Tetratricopeptide repeat 201 289 1.3E-20 T 13-10-2018 Atc_0576 779279865c207e331aebe38bc5fe122b 289 SUPERFAMILY SSF48452 120 168 6.99E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0576 779279865c207e331aebe38bc5fe122b 289 Gene3D G3DSA:1.25.40.10 117 204 3.5E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0576 779279865c207e331aebe38bc5fe122b 289 PRINTS PR00421 Thioredoxin family signature 36 45 2.2E-6 T 13-10-2018 Atc_0576 779279865c207e331aebe38bc5fe122b 289 PRINTS PR00421 Thioredoxin family signature 28 36 2.2E-6 T 13-10-2018 Atc_0576 779279865c207e331aebe38bc5fe122b 289 PRINTS PR00421 Thioredoxin family signature 76 87 2.2E-6 T 13-10-2018 Atc_2377 a2881a516a2c18505f3c11b0460c459a 93 Gene3D G3DSA:3.30.70.260 14 93 1.6E-14 T 13-10-2018 Atc_2377 a2881a516a2c18505f3c11b0460c459a 93 SUPERFAMILY SSF117991 15 93 2.35E-15 T 13-10-2018 IPR027471 YbeD-like domain superfamily Atc_2377 a2881a516a2c18505f3c11b0460c459a 93 Pfam PF04359 Protein of unknown function (DUF493) 15 93 6.5E-18 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 Atc_0647 282c876858b4fb693c4d10627ca38961 319 Gene3D G3DSA:2.60.40.420 115 291 2.3E-43 T 13-10-2018 IPR008972 Cupredoxin Atc_0647 282c876858b4fb693c4d10627ca38961 319 Pfam PF06481 COX Aromatic Rich Motif 247 293 1.2E-13 T 13-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 Atc_0647 282c876858b4fb693c4d10627ca38961 319 SUPERFAMILY SSF49503 132 289 1.14E-40 T 13-10-2018 IPR008972 Cupredoxin Atc_0647 282c876858b4fb693c4d10627ca38961 319 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 156 232 6.6E-8 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0647 282c876858b4fb693c4d10627ca38961 319 Gene3D G3DSA:1.10.287.90 31 114 3.0E-22 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0647 282c876858b4fb693c4d10627ca38961 319 SUPERFAMILY SSF81464 31 119 2.13E-15 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_m245 87c8ad40a47112fb95f37fd0562d78e6 121 Pfam PF13560 Helix-turn-helix domain 17 74 1.3E-7 T 13-10-2018 Atc_m245 87c8ad40a47112fb95f37fd0562d78e6 121 SMART SM00530 20 75 0.004 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atc_m245 87c8ad40a47112fb95f37fd0562d78e6 121 Gene3D G3DSA:1.10.260.40 9 80 1.4E-13 T 13-10-2018 Atc_m245 87c8ad40a47112fb95f37fd0562d78e6 121 SUPERFAMILY SSF47413 12 70 6.88E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_2311 9207ebd017d6e0831f5c52d6b9816e92 371 Pfam PF10442 FIST C domain 238 355 2.5E-28 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Atc_2311 9207ebd017d6e0831f5c52d6b9816e92 371 PIRSF PIRSF018953 9 371 2.0E-52 T 13-10-2018 IPR016741 Uncharacterised conserved protein UCP018953 Atc_2311 9207ebd017d6e0831f5c52d6b9816e92 371 SMART SM01204 216 357 3.1E-33 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Atc_2311 9207ebd017d6e0831f5c52d6b9816e92 371 Pfam PF08495 FIST N domain 35 212 3.5E-24 T 13-10-2018 IPR013702 FIST domain, N-terminal Atc_2311 9207ebd017d6e0831f5c52d6b9816e92 371 SMART SM00897 32 215 6.0E-29 T 13-10-2018 IPR013702 FIST domain, N-terminal Atc_1653 c4103f9cdf2f5b21a1c13c06e938da10 469 SUPERFAMILY SSF88723 16 158 6.67E-12 T 13-10-2018 IPR029060 PIN-like domain superfamily Atc_1653 c4103f9cdf2f5b21a1c13c06e938da10 469 Pfam PF13638 PIN domain 17 157 5.6E-38 T 13-10-2018 IPR002716 PIN domain Atc_1653 c4103f9cdf2f5b21a1c13c06e938da10 469 SMART SM00670 15 144 8.2E-13 T 13-10-2018 IPR002716 PIN domain Atc_1653 c4103f9cdf2f5b21a1c13c06e938da10 469 Pfam PF02562 PhoH-like protein 256 459 2.9E-55 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 Atc_1653 c4103f9cdf2f5b21a1c13c06e938da10 469 Gene3D G3DSA:3.40.50.1010 11 159 4.8E-22 T 13-10-2018 Atc_1653 c4103f9cdf2f5b21a1c13c06e938da10 469 SUPERFAMILY SSF52540 128 449 4.14E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1653 c4103f9cdf2f5b21a1c13c06e938da10 469 Gene3D G3DSA:3.40.50.300 254 468 7.7E-67 T 13-10-2018 Atc_0442 47e69b2058f0295685c1121a702dbd7f 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 140 2.7E-35 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Atc_0442 47e69b2058f0295685c1121a702dbd7f 344 Gene3D G3DSA:3.30.360.10 147 312 7.1E-128 T 13-10-2018 Atc_0442 47e69b2058f0295685c1121a702dbd7f 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 338 43.283 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atc_0442 47e69b2058f0295685c1121a702dbd7f 344 SUPERFAMILY SSF51735 2 173 2.02E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0442 47e69b2058f0295685c1121a702dbd7f 344 SMART SM00859 3 141 4.4E-56 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Atc_0442 47e69b2058f0295685c1121a702dbd7f 344 SUPERFAMILY SSF55347 149 312 4.03E-49 T 13-10-2018 Atc_0442 47e69b2058f0295685c1121a702dbd7f 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 315 5.1E-17 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atc_0442 47e69b2058f0295685c1121a702dbd7f 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 344 2.4E-129 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atc_0442 47e69b2058f0295685c1121a702dbd7f 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 13-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atc_0442 47e69b2058f0295685c1121a702dbd7f 344 Gene3D G3DSA:3.40.50.720 3 329 7.1E-128 T 13-10-2018 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 SUPERFAMILY SSF88697 280 371 2.87E-21 T 13-10-2018 IPR015947 PUA-like superfamily Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 SUPERFAMILY SSF53633 10 261 2.36E-67 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 SMART SM00359 281 364 3.1E-10 T 13-10-2018 IPR002478 PUA domain GO:0003723 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 PIRSF PIRSF000729 5 373 3.6E-124 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 Gene3D G3DSA:3.40.1160.10 7 269 2.7E-86 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 Pfam PF01472 PUA domain 281 353 6.6E-16 T 13-10-2018 IPR002478 PUA domain GO:0003723 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 Pfam PF00696 Amino acid kinase family 10 237 5.3E-42 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 1.7E-47 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 1.7E-47 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 1.7E-47 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 1.7E-47 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 1.7E-47 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 Gene3D G3DSA:2.30.130.10 270 372 1.0E-28 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 263 35.22 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 370 9.0E-123 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atc_2700 d0ac87d53919f10c16c595f893ca0034 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atc_1976 9f05bbc1617299b93fb93af9eb5f34ea 95 Pfam PF01355 High potential iron-sulfur protein 42 91 1.5E-4 T 13-10-2018 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 Atc_1976 9f05bbc1617299b93fb93af9eb5f34ea 95 SUPERFAMILY SSF57652 40 93 3.4E-15 T 13-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 Atc_1976 9f05bbc1617299b93fb93af9eb5f34ea 95 Gene3D G3DSA:4.10.490.10 35 93 8.1E-22 T 13-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 Atc_2803 b1e39ee28f2e7de3c5263d127868edd1 228 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 6 225 51.873 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Atc_2803 b1e39ee28f2e7de3c5263d127868edd1 228 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 8 212 7.9E-59 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Atc_2803 b1e39ee28f2e7de3c5263d127868edd1 228 Pfam PF06508 Queuosine biosynthesis protein QueC 8 219 5.4E-76 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Atc_2803 b1e39ee28f2e7de3c5263d127868edd1 228 PIRSF PIRSF006293 4 228 2.7E-73 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Atc_2803 b1e39ee28f2e7de3c5263d127868edd1 228 Gene3D G3DSA:3.40.50.620 4 224 2.7E-72 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2803 b1e39ee28f2e7de3c5263d127868edd1 228 SUPERFAMILY SSF52402 6 227 7.94E-62 T 13-10-2018 Atc_0579 b757d8938eb5dfb4027ab02ecf4cd40c 414 PIRSF PIRSF000412 1 414 3.4E-166 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atc_0579 b757d8938eb5dfb4027ab02ecf4cd40c 414 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 414 52.308 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atc_0579 b757d8938eb5dfb4027ab02ecf4cd40c 414 Gene3D G3DSA:3.40.640.10 37 287 3.4E-181 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_0579 b757d8938eb5dfb4027ab02ecf4cd40c 414 Gene3D G3DSA:3.90.1150.10 10 391 3.4E-181 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_0579 b757d8938eb5dfb4027ab02ecf4cd40c 414 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atc_0579 b757d8938eb5dfb4027ab02ecf4cd40c 414 Pfam PF00464 Serine hydroxymethyltransferase 8 380 8.3E-172 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atc_0579 b757d8938eb5dfb4027ab02ecf4cd40c 414 SUPERFAMILY SSF53383 5 413 1.35E-178 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 8 331 5.6E-71 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 Pfam PF00460 Flagella basal body rod protein 8 37 1.9E-8 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 SUPERFAMILY SSF64518 467 684 1.31E-15 T 13-10-2018 Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 SUPERFAMILY SSF64518 136 465 1.83E-26 T 13-10-2018 Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 618 682 4.5E-10 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 3.1E-21 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 3.1E-21 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 PRINTS PR01005 Flagellar hook-associated protein signature 424 441 3.1E-21 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 3.1E-21 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 3.1E-21 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Atc_1470 89a58b8a6a6f7f92c6004f8642681b8c 684 PRINTS PR01005 Flagellar hook-associated protein signature 52 74 3.1E-21 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Atc_0685 4254fcbec44ba48c0ae589ee925bc28e 411 SMART SM00257 337 381 7.3E-4 T 13-10-2018 IPR018392 LysM domain Atc_0685 4254fcbec44ba48c0ae589ee925bc28e 411 Gene3D G3DSA:3.40.710.10 58 238 7.9E-87 T 13-10-2018 Atc_0685 4254fcbec44ba48c0ae589ee925bc28e 411 Gene3D G3DSA:3.30.450.330 1 319 7.9E-87 T 13-10-2018 Atc_0685 4254fcbec44ba48c0ae589ee925bc28e 411 Pfam PF00905 Penicillin binding protein transpeptidase domain 21 317 8.1E-61 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atc_0685 4254fcbec44ba48c0ae589ee925bc28e 411 Gene3D G3DSA:3.10.350.10 332 388 8.2E-7 T 13-10-2018 IPR036779 LysM domain superfamily Atc_0685 4254fcbec44ba48c0ae589ee925bc28e 411 SUPERFAMILY SSF56601 15 328 4.61E-75 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_2608 6417631ea2d88a2328c0a37bfbfa984e 93 Pfam PF02325 YGGT family 15 84 5.2E-22 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 Atc_0007 37c7bf00d48a82871006ba14269b4f5f 269 Gene3D G3DSA:3.40.50.300 1 259 1.3E-70 T 13-10-2018 Atc_0007 37c7bf00d48a82871006ba14269b4f5f 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 7.3E-105 T 13-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Atc_0007 37c7bf00d48a82871006ba14269b4f5f 269 SUPERFAMILY SSF52540 1 267 2.01E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0007 37c7bf00d48a82871006ba14269b4f5f 269 Pfam PF13614 AAA domain 3 160 2.9E-20 T 13-10-2018 IPR025669 AAA domain Atc_0007 37c7bf00d48a82871006ba14269b4f5f 269 PIRSF PIRSF003092 1 269 3.1E-90 T 13-10-2018 IPR025501 ATP binding protein MinD Atc_0710 34829bfd696b272b48a544c30f7f21f6 79 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 10 55 6.3E-6 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atc_0710 34829bfd696b272b48a544c30f7f21f6 79 SUPERFAMILY SSF89447 7 72 4.55E-9 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Atc_0710 34829bfd696b272b48a544c30f7f21f6 79 Gene3D G3DSA:2.10.260.10 5 76 3.1E-9 T 13-10-2018 Atc_2641 496427d130a7db6d20286ca7a5daa084 239 SUPERFAMILY SSF88713 22 214 5.68E-39 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atc_2641 496427d130a7db6d20286ca7a5daa084 239 Gene3D G3DSA:3.20.20.370 1 227 5.6E-59 T 13-10-2018 Atc_2641 496427d130a7db6d20286ca7a5daa084 239 Pfam PF01522 Polysaccharide deacetylase 57 193 1.4E-30 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Atc_2661 5c45c1bc7e6e72cb525465672783cf62 465 Gene3D G3DSA:3.40.50.720 6 93 2.9E-31 T 13-10-2018 Atc_2661 5c45c1bc7e6e72cb525465672783cf62 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 399 7.1E-21 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Atc_2661 5c45c1bc7e6e72cb525465672783cf62 465 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 451 9.4E-162 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2661 5c45c1bc7e6e72cb525465672783cf62 465 Pfam PF08245 Mur ligase middle domain 110 294 2.5E-28 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Atc_2661 5c45c1bc7e6e72cb525465672783cf62 465 Pfam PF01225 Mur ligase family, catalytic domain 7 104 4.6E-28 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Atc_2661 5c45c1bc7e6e72cb525465672783cf62 465 SUPERFAMILY SSF53244 313 452 8.06E-40 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_2661 5c45c1bc7e6e72cb525465672783cf62 465 SUPERFAMILY SSF53623 91 312 1.27E-70 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_2661 5c45c1bc7e6e72cb525465672783cf62 465 Gene3D G3DSA:3.40.1190.10 94 311 1.0E-79 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_2661 5c45c1bc7e6e72cb525465672783cf62 465 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 461 42.136 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2661 5c45c1bc7e6e72cb525465672783cf62 465 Gene3D G3DSA:3.90.190.20 312 458 6.4E-45 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_2661 5c45c1bc7e6e72cb525465672783cf62 465 SUPERFAMILY SSF51984 6 92 5.1E-28 T 13-10-2018 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 SUPERFAMILY SSF56655 5 332 2.26E-112 T 13-10-2018 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 180 203 1.4E-70 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 308 333 1.4E-70 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 206 233 1.4E-70 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 1.4E-70 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 149 172 1.4E-70 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 1.4E-70 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 334 46.656 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 Gene3D G3DSA:3.40.190.80 198 335 8.6E-55 T 13-10-2018 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 PIRSF PIRSF000904 1 335 2.4E-121 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 PIRSF PIRSF500210 1 335 9.0E-125 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 Gene3D G3DSA:3.30.540.10 2 196 6.4E-69 T 13-10-2018 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 274 286 - T 13-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Atc_2865 1714be7dc0e5b67d8d5c397964c6d972 335 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 194 3.3E-62 T 13-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Atc_1027 5057d0e2b11b38b28b1edd0aea01a8ee 629 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 131 517 2.6E-64 T 13-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain Atc_1027 5057d0e2b11b38b28b1edd0aea01a8ee 629 Gene3D G3DSA:3.40.50.300 133 518 1.1E-55 T 13-10-2018 Atc_1027 5057d0e2b11b38b28b1edd0aea01a8ee 629 Gene3D G3DSA:1.10.8.80 210 338 1.1E-55 T 13-10-2018 Atc_1027 5057d0e2b11b38b28b1edd0aea01a8ee 629 SUPERFAMILY SSF52540 143 515 1.22E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2238 ab2017c71e20c7a1fb3a18263d2eb2c1 327 TIGRFAM TIGR03466 HpnA: hopanoid-associated sugar epimerase 1 324 2.3E-147 T 13-10-2018 IPR017829 Hopanoid-associated sugar epimerase KEGG: 00941+1.1.1.219|MetaCyc: PWY-5152 Atc_2238 ab2017c71e20c7a1fb3a18263d2eb2c1 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 228 2.0E-38 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atc_2238 ab2017c71e20c7a1fb3a18263d2eb2c1 327 Gene3D G3DSA:3.40.50.720 1 325 1.0E-112 T 13-10-2018 Atc_2238 ab2017c71e20c7a1fb3a18263d2eb2c1 327 SUPERFAMILY SSF51735 1 324 1.85E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_3p20 a08534c0c7aa962f4eb156a1b6c25534 250 Gene3D G3DSA:3.40.1410.10 84 248 5.0E-39 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atc_3p20 a08534c0c7aa962f4eb156a1b6c25534 250 Gene3D G3DSA:1.10.10.10 16 83 6.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_3p20 a08534c0c7aa962f4eb156a1b6c25534 250 SUPERFAMILY SSF64288 68 247 4.55E-41 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atc_3p20 a08534c0c7aa962f4eb156a1b6c25534 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 6.1E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atc_3p20 a08534c0c7aa962f4eb156a1b6c25534 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 6.1E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atc_3p20 a08534c0c7aa962f4eb156a1b6c25534 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 6.1E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atc_3p20 a08534c0c7aa962f4eb156a1b6c25534 250 SUPERFAMILY SSF46785 15 90 1.04E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_3p20 a08534c0c7aa962f4eb156a1b6c25534 250 SMART SM00866 101 240 3.4E-29 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atc_3p20 a08534c0c7aa962f4eb156a1b6c25534 250 Pfam PF07702 UTRA domain 103 239 6.5E-30 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atc_3p20 a08534c0c7aa962f4eb156a1b6c25534 250 SMART SM00345 21 80 4.0E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atc_0353 b1e4d2a22347a583caef0e18bdf0787f 198 Gene3D G3DSA:3.30.230.40 1 91 5.4E-36 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Atc_0353 b1e4d2a22347a583caef0e18bdf0787f 198 SUPERFAMILY SSF54211 4 87 3.29E-31 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_0353 b1e4d2a22347a583caef0e18bdf0787f 198 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Atc_0353 b1e4d2a22347a583caef0e18bdf0787f 198 Gene3D G3DSA:3.30.230.40 92 196 3.5E-38 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Atc_0353 b1e4d2a22347a583caef0e18bdf0787f 198 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 34 176 3.7E-63 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Atc_0353 b1e4d2a22347a583caef0e18bdf0787f 198 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Atc_0353 b1e4d2a22347a583caef0e18bdf0787f 198 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 196 41.655 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Atc_0353 b1e4d2a22347a583caef0e18bdf0787f 198 SUPERFAMILY SSF54211 89 181 1.9E-34 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_2453 bff5d7d4fc4dde60437ead74ec4bbb5a 399 Hamap MF_00005 Argininosuccinate synthase [argG]. 2 399 53.918 T 13-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atc_2453 bff5d7d4fc4dde60437ead74ec4bbb5a 399 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 8 16 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atc_2453 bff5d7d4fc4dde60437ead74ec4bbb5a 399 TIGRFAM TIGR00032 argG: argininosuccinate synthase 4 394 2.4E-145 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atc_2453 bff5d7d4fc4dde60437ead74ec4bbb5a 399 Pfam PF00764 Arginosuccinate synthase 6 393 1.2E-159 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atc_2453 bff5d7d4fc4dde60437ead74ec4bbb5a 399 Gene3D G3DSA:3.90.1260.10 175 399 4.7E-101 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atc_2453 bff5d7d4fc4dde60437ead74ec4bbb5a 399 SUPERFAMILY SSF52402 3 206 3.31E-50 T 13-10-2018 Atc_2453 bff5d7d4fc4dde60437ead74ec4bbb5a 399 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 116 127 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atc_2453 bff5d7d4fc4dde60437ead74ec4bbb5a 399 SUPERFAMILY SSF69864 174 397 1.26E-94 T 13-10-2018 Atc_2453 bff5d7d4fc4dde60437ead74ec4bbb5a 399 Gene3D G3DSA:3.40.50.620 3 174 9.5E-70 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0617 a6c20ec95cceba7833c9f65db049f537 180 Pfam PF00281 Ribosomal protein L5 25 81 3.3E-27 T 13-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0617 a6c20ec95cceba7833c9f65db049f537 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 2.0E-39 T 13-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0617 a6c20ec95cceba7833c9f65db049f537 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.273 T 13-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0617 a6c20ec95cceba7833c9f65db049f537 180 SUPERFAMILY SSF55282 4 179 4.24E-76 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0617 a6c20ec95cceba7833c9f65db049f537 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 13-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0617 a6c20ec95cceba7833c9f65db049f537 180 PIRSF PIRSF002161 1 180 5.9E-62 T 13-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0617 a6c20ec95cceba7833c9f65db049f537 180 Gene3D G3DSA:3.30.1440.10 1 180 3.4E-76 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0193 16029a62530f090f3defa697c47f3260 136 Gene3D G3DSA:3.40.50.2300 2 133 1.9E-39 T 13-10-2018 Atc_0193 16029a62530f090f3defa697c47f3260 136 SUPERFAMILY SSF52172 9 132 6.4E-38 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0193 16029a62530f090f3defa697c47f3260 136 Pfam PF00072 Response regulator receiver domain 13 124 2.8E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0193 16029a62530f090f3defa697c47f3260 136 SMART SM00448 10 124 8.5E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_m099 1914600efa788d4010cd2f5e65288b48 551 Pfam PF11426 Tn7 transposition regulator TnsC 504 550 1.1E-23 T 13-10-2018 IPR021542 Tn7 transposition regulator TnsC Atc_m099 1914600efa788d4010cd2f5e65288b48 551 SMART SM00382 130 299 7.0E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_m099 1914600efa788d4010cd2f5e65288b48 551 Gene3D G3DSA:1.10.10.960 498 550 2.5E-5 T 13-10-2018 Atc_m099 1914600efa788d4010cd2f5e65288b48 551 SUPERFAMILY SSF52540 131 385 8.75E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m099 1914600efa788d4010cd2f5e65288b48 551 Gene3D G3DSA:3.40.50.300 122 287 1.0E-10 T 13-10-2018 Atc_m099 1914600efa788d4010cd2f5e65288b48 551 Pfam PF13401 AAA domain 129 277 2.6E-28 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0244 cf63cf8b7eb5421d144e46d68a279d33 163 SUPERFAMILY SSF141523 1 149 5.49E-18 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_0244 cf63cf8b7eb5421d144e46d68a279d33 163 Gene3D G3DSA:2.40.440.10 1 156 1.6E-20 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_0244 cf63cf8b7eb5421d144e46d68a279d33 163 Pfam PF03734 L,D-transpeptidase catalytic domain 2 149 1.1E-11 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atc_0853 b5be2026d301e0347d4654a6e6cba8e7 260 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 177 257 9.3E-29 T 13-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Atc_0853 b5be2026d301e0347d4654a6e6cba8e7 260 SUPERFAMILY SSF51161 3 259 1.75E-79 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Atc_0853 b5be2026d301e0347d4654a6e6cba8e7 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 49 9.8E-11 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_0853 b5be2026d301e0347d4654a6e6cba8e7 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 139 1.3E-6 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_0853 b5be2026d301e0347d4654a6e6cba8e7 260 Gene3D G3DSA:2.160.10.10 1 191 1.9E-53 T 13-10-2018 Atc_0853 b5be2026d301e0347d4654a6e6cba8e7 260 PIRSF PIRSF000456 1 260 3.3E-105 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Atc_0853 b5be2026d301e0347d4654a6e6cba8e7 260 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 5 257 1.3E-103 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Atc_0853 b5be2026d301e0347d4654a6e6cba8e7 260 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 2 259 45.68 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Atc_0853 b5be2026d301e0347d4654a6e6cba8e7 260 Gene3D G3DSA:1.20.1180.10 194 259 1.4E-21 T 13-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Atc_0305 b610e508d94da0c3ff62c50901054c71 252 Pfam PF01975 Survival protein SurE 4 185 1.3E-58 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Atc_0305 b610e508d94da0c3ff62c50901054c71 252 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 235 2.0E-69 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Atc_0305 b610e508d94da0c3ff62c50901054c71 252 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 252 40.426 T 13-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Atc_0305 b610e508d94da0c3ff62c50901054c71 252 SUPERFAMILY SSF64167 3 248 2.35E-85 T 13-10-2018 Atc_0305 b610e508d94da0c3ff62c50901054c71 252 Gene3D G3DSA:3.40.1210.10 1 251 8.4E-94 T 13-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Atc_1142 d19ccb15d086c8a5a9954b0fd8bd8eaf 87 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 50 2.6E-5 T 13-10-2018 Atc_1142 d19ccb15d086c8a5a9954b0fd8bd8eaf 87 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 61 3.4E-10 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Atc_1142 d19ccb15d086c8a5a9954b0fd8bd8eaf 87 SUPERFAMILY SSF143120 1 57 6.54E-10 T 13-10-2018 IPR036165 YefM-like superfamily Atc_1142 d19ccb15d086c8a5a9954b0fd8bd8eaf 87 Gene3D G3DSA:3.40.1620.10 1 38 4.1E-5 T 13-10-2018 Atc_1081 02ba5e2a46e0d941047a68238896d1ab 427 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 11 424 1.2E-85 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 Atc_1081 02ba5e2a46e0d941047a68238896d1ab 427 Pfam PF02321 Outer membrane efflux protein 17 203 3.3E-29 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1081 02ba5e2a46e0d941047a68238896d1ab 427 Pfam PF02321 Outer membrane efflux protein 227 410 4.7E-31 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1081 02ba5e2a46e0d941047a68238896d1ab 427 Gene3D G3DSA:1.20.1600.10 13 427 3.5E-101 T 13-10-2018 Atc_1081 02ba5e2a46e0d941047a68238896d1ab 427 SUPERFAMILY SSF56954 15 424 2.09E-77 T 13-10-2018 Atc_0352 82b58cc8b57e3fe141f7eba5dbb0cf81 226 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 8 213 2.1E-66 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Atc_0352 82b58cc8b57e3fe141f7eba5dbb0cf81 226 Gene3D G3DSA:3.40.50.880 4 218 6.1E-75 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_0352 82b58cc8b57e3fe141f7eba5dbb0cf81 226 PIRSF PIRSF000495 6 216 1.0E-70 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Atc_0352 82b58cc8b57e3fe141f7eba5dbb0cf81 226 SUPERFAMILY SSF52317 7 220 6.74E-59 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_0352 82b58cc8b57e3fe141f7eba5dbb0cf81 226 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 7 213 36.364 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Atc_0352 82b58cc8b57e3fe141f7eba5dbb0cf81 226 Pfam PF00117 Glutamine amidotransferase class-I 10 210 1.0E-19 T 13-10-2018 IPR017926 Glutamine amidotransferase Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 Gene3D G3DSA:3.30.1360.120 2 126 2.5E-43 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 222 341 6.0E-19 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 Pfam PF12631 MnmE helical domain 128 446 1.3E-51 T 13-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 273 288 5.9E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 224 244 5.9E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 Gene3D G3DSA:1.20.120.430 127 449 3.6E-100 T 13-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 Gene3D G3DSA:3.40.50.300 222 378 3.6E-100 T 13-10-2018 Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 9 449 30.874 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 SUPERFAMILY SSF52540 78 369 7.96E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 Pfam PF01926 50S ribosome-binding GTPase 223 336 1.8E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 15 449 5.0E-98 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Atc_2829 b3f40a49580fab4a8ec3690c1ba4e5dd 449 Pfam PF10396 GTP-binding protein TrmE N-terminus 10 125 1.7E-35 T 13-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Atc_0906 960ad26dfb80abc186e973ab44239e20 79 Pfam PF02597 ThiS family 4 79 2.2E-17 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Atc_0906 960ad26dfb80abc186e973ab44239e20 79 Gene3D G3DSA:3.10.20.30 2 79 1.1E-20 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Atc_0906 960ad26dfb80abc186e973ab44239e20 79 SUPERFAMILY SSF54285 1 79 1.07E-16 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Atc_0972 e72c10ec7d4729eb35f2ebe6dd7815e1 360 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 17 354 3.0E-142 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0972 e72c10ec7d4729eb35f2ebe6dd7815e1 360 Gene3D G3DSA:3.20.20.140 16 356 7.7E-110 T 13-10-2018 Atc_0972 e72c10ec7d4729eb35f2ebe6dd7815e1 360 ProSitePatterns PS00483 Dihydroorotase signature 2. 258 269 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0972 e72c10ec7d4729eb35f2ebe6dd7815e1 360 ProSitePatterns PS00482 Dihydroorotase signature 1. 24 32 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0972 e72c10ec7d4729eb35f2ebe6dd7815e1 360 SUPERFAMILY SSF51556 15 355 1.52E-144 T 13-10-2018 IPR032466 Metal-dependent hydrolase Atc_0972 e72c10ec7d4729eb35f2ebe6dd7815e1 360 Hamap MF_00219 Dihydroorotase [pyrC]. 15 356 47.151 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0972 e72c10ec7d4729eb35f2ebe6dd7815e1 360 PIRSF PIRSF001237 13 357 9.5E-141 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atc_0972 e72c10ec7d4729eb35f2ebe6dd7815e1 360 Pfam PF01979 Amidohydrolase family 24 322 3.6E-21 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atc_1604 9012a7486a34752e4691e47c7572e5d1 364 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 13 241 1.8E-34 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atc_1604 9012a7486a34752e4691e47c7572e5d1 364 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 14 351 2.6E-74 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atc_1314 96da01e59a12ff9482c465727fe68a97 86 Pfam PF04226 Transglycosylase associated protein 35 85 9.3E-11 T 13-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Atc_1314 96da01e59a12ff9482c465727fe68a97 86 Gene3D G3DSA:1.10.1760.20 1 86 4.8E-5 T 13-10-2018 Atc_2456 cb91cfa20c1d807643d23b81b764d9d0 134 Gene3D G3DSA:3.30.420.10 3 130 7.4E-42 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_2456 cb91cfa20c1d807643d23b81b764d9d0 134 Pfam PF00075 RNase H 17 116 2.7E-32 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Atc_2456 cb91cfa20c1d807643d23b81b764d9d0 134 SUPERFAMILY SSF53098 2 119 4.93E-37 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 SMART SM00955 269 597 2.6E-174 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 Gene3D G3DSA:2.40.50.140 84 156 1.0E-19 T 13-10-2018 Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 Pfam PF08461 Ribonuclease R winged-helix domain 33 83 1.5E-4 T 13-10-2018 IPR013668 Ribonuclease R winged-helix domain Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 ProSitePatterns PS01175 Ribonuclease II family signature. 564 588 - T 13-10-2018 IPR022966 Ribonuclease II/R, conserved site Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 Hamap MF_01895 Ribonuclease R [rnr]. 48 728 57.178 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 76 727 5.3E-226 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 Gene3D G3DSA:2.40.50.140 648 741 3.3E-20 T 13-10-2018 Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 SUPERFAMILY SSF50249 645 726 2.09E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 SUPERFAMILY SSF50249 76 156 5.33E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 SMART SM00316 89 151 57.0 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 SMART SM00316 645 728 7.0E-11 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 Pfam PF00773 RNB domain 269 596 1.1E-106 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 TIGRFAM TIGR02063 RNase_R: ribonuclease R 30 726 2.1E-260 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 Pfam PF00575 S1 RNA binding domain 644 726 1.2E-9 T 13-10-2018 IPR003029 S1 domain GO:0003676 Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 SUPERFAMILY SSF50249 196 645 3.43E-143 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 SMART SM00357 95 154 1.2E-19 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Atc_1000 f5062c12fe31463cb8bf81241c17f853 742 Pfam PF08206 Ribonuclease B OB domain 96 153 1.7E-21 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Atc_1232 3c2a611a93f2870cbba10971743bd718 198 SUPERFAMILY SSF56784 1 187 1.87E-17 T 13-10-2018 IPR036412 HAD-like superfamily Atc_1232 3c2a611a93f2870cbba10971743bd718 198 Gene3D G3DSA:3.40.50.1000 4 151 3.7E-7 T 13-10-2018 IPR023214 HAD superfamily Atc_2672 e4d64a9a538b5422c847d1e5cf815986 258 Gene3D G3DSA:1.10.8.1040 22 78 3.5E-6 T 13-10-2018 Atc_2672 e4d64a9a538b5422c847d1e5cf815986 258 Pfam PF13624 SurA N-terminal domain 20 80 2.5E-6 T 13-10-2018 Atc_2672 e4d64a9a538b5422c847d1e5cf815986 258 Pfam PF13616 PPIC-type PPIASE domain 125 216 3.2E-25 T 13-10-2018 Atc_2672 e4d64a9a538b5422c847d1e5cf815986 258 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 155 176 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Atc_2672 e4d64a9a538b5422c847d1e5cf815986 258 Gene3D G3DSA:3.10.50.40 122 250 7.3E-31 T 13-10-2018 Atc_2672 e4d64a9a538b5422c847d1e5cf815986 258 SUPERFAMILY SSF109998 23 156 9.61E-19 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Atc_2672 e4d64a9a538b5422c847d1e5cf815986 258 SUPERFAMILY SSF54534 121 214 2.94E-27 T 13-10-2018 Atc_2166 7039e3b73625448b6bdc6c60bd28bb57 406 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 14 395 1.6E-134 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atc_2166 7039e3b73625448b6bdc6c60bd28bb57 406 SUPERFAMILY SSF53383 35 396 2.39E-121 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_2166 7039e3b73625448b6bdc6c60bd28bb57 406 PIRSF PIRSF001434 1 398 1.2E-129 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atc_2166 7039e3b73625448b6bdc6c60bd28bb57 406 Gene3D G3DSA:3.90.1150.10 264 406 2.9E-51 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_2166 7039e3b73625448b6bdc6c60bd28bb57 406 Gene3D G3DSA:3.40.640.10 9 260 1.4E-88 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_2166 7039e3b73625448b6bdc6c60bd28bb57 406 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 15 395 53.557 T 13-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Atc_2166 7039e3b73625448b6bdc6c60bd28bb57 406 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 14 394 1.2E-171 T 13-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Atc_0869 27d658a4ed1dd3de0832c0ec42c0b3c2 612 SUPERFAMILY SSF52540 348 590 6.37E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0869 27d658a4ed1dd3de0832c0ec42c0b3c2 612 Gene3D G3DSA:3.40.50.300 345 593 2.3E-87 T 13-10-2018 Atc_0869 27d658a4ed1dd3de0832c0ec42c0b3c2 612 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0869 27d658a4ed1dd3de0832c0ec42c0b3c2 612 SUPERFAMILY SSF90123 19 330 2.75E-65 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atc_0869 27d658a4ed1dd3de0832c0ec42c0b3c2 612 Pfam PF00005 ABC transporter 371 520 4.4E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0869 27d658a4ed1dd3de0832c0ec42c0b3c2 612 Pfam PF00664 ABC transporter transmembrane region 31 295 4.6E-44 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atc_0869 27d658a4ed1dd3de0832c0ec42c0b3c2 612 Gene3D G3DSA:1.20.1560.10 4 332 7.8E-66 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atc_0869 27d658a4ed1dd3de0832c0ec42c0b3c2 612 SMART SM00382 380 581 1.0E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1336 630cba882741abc1f77417813e2dd2bb 307 SUPERFAMILY SSF103481 51 145 3.79E-12 T 13-10-2018 Atc_1336 630cba882741abc1f77417813e2dd2bb 307 SUPERFAMILY SSF103481 192 290 5.49E-6 T 13-10-2018 Atc_1336 630cba882741abc1f77417813e2dd2bb 307 Pfam PF00892 EamA-like transporter family 14 143 7.4E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atc_0255 7015500248defaa1058f157d412914fd 655 Pfam PF13604 AAA domain 188 353 2.1E-29 T 13-10-2018 Atc_0255 7015500248defaa1058f157d412914fd 655 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 24 646 51.09 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Atc_0255 7015500248defaa1058f157d412914fd 655 Gene3D G3DSA:3.40.50.300 143 392 8.3E-57 T 13-10-2018 Atc_0255 7015500248defaa1058f157d412914fd 655 Pfam PF13538 UvrD-like helicase C-terminal domain 577 623 2.1E-15 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain Atc_0255 7015500248defaa1058f157d412914fd 655 Gene3D G3DSA:1.10.10.1020 10 142 1.4E-6 T 13-10-2018 Atc_0255 7015500248defaa1058f157d412914fd 655 SMART SM00382 199 354 0.0013 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0255 7015500248defaa1058f157d412914fd 655 Gene3D G3DSA:3.40.50.300 524 636 9.3E-22 T 13-10-2018 Atc_0255 7015500248defaa1058f157d412914fd 655 Gene3D G3DSA:3.40.50.300 401 517 4.8E-13 T 13-10-2018 Atc_0255 7015500248defaa1058f157d412914fd 655 SUPERFAMILY SSF52540 319 645 1.06E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0255 7015500248defaa1058f157d412914fd 655 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 15 648 1.7E-138 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Atc_0255 7015500248defaa1058f157d412914fd 655 SUPERFAMILY SSF52540 15 352 9.64E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1494 1bc4bdcde88acae8264ae2c53d60a9e5 90 PIRSF PIRSF004669 1 89 2.5E-32 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Atc_1494 1bc4bdcde88acae8264ae2c53d60a9e5 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.8E-23 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Atc_1494 1bc4bdcde88acae8264ae2c53d60a9e5 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.8E-23 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Atc_1494 1bc4bdcde88acae8264ae2c53d60a9e5 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.8E-23 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Atc_1494 1bc4bdcde88acae8264ae2c53d60a9e5 90 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.7E-31 T 13-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Atc_1494 1bc4bdcde88acae8264ae2c53d60a9e5 90 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.5E-30 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Atc_0265 af86826784f724e934b084a5af07d83b 428 Pfam PF01979 Amidohydrolase family 210 423 1.5E-7 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atc_0265 af86826784f724e934b084a5af07d83b 428 Gene3D G3DSA:3.20.20.140 60 371 2.6E-102 T 13-10-2018 Atc_0265 af86826784f724e934b084a5af07d83b 428 SUPERFAMILY SSF51556 59 369 9.6E-73 T 13-10-2018 IPR032466 Metal-dependent hydrolase Atc_0265 af86826784f724e934b084a5af07d83b 428 Gene3D G3DSA:2.30.40.10 12 423 2.6E-102 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atc_0265 af86826784f724e934b084a5af07d83b 428 SUPERFAMILY SSF51338 7 425 4.86E-22 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atc_1325 4c8f6d223be9cdf3f89482ea592542f7 428 Gene3D G3DSA:3.30.559.10 213 427 5.9E-49 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atc_1325 4c8f6d223be9cdf3f89482ea592542f7 428 Pfam PF02817 e3 binding domain 172 200 2.0E-7 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Atc_1325 4c8f6d223be9cdf3f89482ea592542f7 428 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 226 425 1.6E-42 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Atc_1325 4c8f6d223be9cdf3f89482ea592542f7 428 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Atc_1325 4c8f6d223be9cdf3f89482ea592542f7 428 SUPERFAMILY SSF47005 167 208 3.27E-5 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Atc_1325 4c8f6d223be9cdf3f89482ea592542f7 428 SUPERFAMILY SSF52777 223 425 2.4E-46 T 13-10-2018 Atc_1325 4c8f6d223be9cdf3f89482ea592542f7 428 Gene3D G3DSA:2.40.50.100 1 101 3.5E-26 T 13-10-2018 Atc_1325 4c8f6d223be9cdf3f89482ea592542f7 428 Pfam PF00364 Biotin-requiring enzyme 4 76 1.2E-12 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Atc_1325 4c8f6d223be9cdf3f89482ea592542f7 428 SUPERFAMILY SSF51230 3 89 5.89E-21 T 13-10-2018 IPR011053 Single hybrid motif Atc_1325 4c8f6d223be9cdf3f89482ea592542f7 428 Gene3D G3DSA:4.10.320.10 164 212 3.0E-8 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 8.3E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 8.3E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 8.3E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 8.3E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 8.3E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 8.3E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 8.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 8.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 Gene3D G3DSA:3.40.50.720 2 259 3.8E-83 T 13-10-2018 Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 SUPERFAMILY SSF51735 4 254 8.54E-82 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1440 98a60301dbb1c9d3c1ca02e3edcafab4 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 251 2.6E-66 T 13-10-2018 Atc_0551 3cf332dd6b1d2d7a28758616bef45d45 245 Pfam PF00753 Metallo-beta-lactamase superfamily 14 183 3.2E-6 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_0551 3cf332dd6b1d2d7a28758616bef45d45 245 SUPERFAMILY SSF56281 1 233 2.03E-44 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_0551 3cf332dd6b1d2d7a28758616bef45d45 245 Gene3D G3DSA:3.60.15.10 2 244 1.2E-59 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_0551 3cf332dd6b1d2d7a28758616bef45d45 245 SMART SM00849 11 183 1.8E-25 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_1902 3cf332dd6b1d2d7a28758616bef45d45 245 Pfam PF00753 Metallo-beta-lactamase superfamily 14 183 3.2E-6 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_1902 3cf332dd6b1d2d7a28758616bef45d45 245 SUPERFAMILY SSF56281 1 233 2.03E-44 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_1902 3cf332dd6b1d2d7a28758616bef45d45 245 Gene3D G3DSA:3.60.15.10 2 244 1.2E-59 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_1902 3cf332dd6b1d2d7a28758616bef45d45 245 SMART SM00849 11 183 1.8E-25 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_0861 50fb8558447572c2e21f2f8d87ae1f5d 363 SUPERFAMILY SSF51395 11 349 7.85E-88 T 13-10-2018 Atc_0861 50fb8558447572c2e21f2f8d87ae1f5d 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 12 344 2.0E-68 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Atc_0861 50fb8558447572c2e21f2f8d87ae1f5d 363 Gene3D G3DSA:3.20.20.70 4 356 1.5E-93 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 26 326 1.9E-45 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 SUPERFAMILY SSF55424 342 420 9.16E-15 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 27 46 1.0E-19 T 13-10-2018 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 281 303 1.0E-19 T 13-10-2018 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 123 141 1.0E-19 T 13-10-2018 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.0E-19 T 13-10-2018 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 1.0E-19 T 13-10-2018 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 SMART SM01353 329 410 0.0013 T 13-10-2018 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 Gene3D G3DSA:3.30.390.30 343 423 2.1E-14 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 Pfam PF14721 Apoptosis-inducing factor, mitochondrion-associated, C-term 329 364 1.9E-6 T 13-10-2018 IPR029324 Mitochondrial apoptosis-inducing factor, C-terminal domain GO:0046983 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 Gene3D G3DSA:3.50.50.60 28 335 6.7E-88 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1941 4bdc298cb1f447a213420b791728ad42 424 Gene3D G3DSA:3.50.50.60 65 261 6.7E-88 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1941 4bdc298cb1f447a213420b791728ad42 424 SUPERFAMILY SSF51905 24 358 1.17E-38 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1941 4bdc298cb1f447a213420b791728ad42 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 26 48 9.2E-11 T 13-10-2018 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 9.2E-11 T 13-10-2018 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 9.2E-11 T 13-10-2018 Atc_1941 4bdc298cb1f447a213420b791728ad42 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 303 9.2E-11 T 13-10-2018 Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 Pfam PF08275 DNA primase catalytic core, N-terminal domain 121 243 3.7E-36 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 SMART SM00400 35 89 4.3E-34 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 TIGRFAM TIGR01391 dnaG: DNA primase 4 409 1.1E-134 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 Gene3D G3DSA:3.90.980.10 106 232 1.6E-37 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 Pfam PF13155 Toprim-like 254 340 2.1E-14 T 13-10-2018 Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 SMART SM00493 251 322 3.4E-20 T 13-10-2018 IPR006171 TOPRIM domain Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 Hamap MF_00974 DNA primase [dnaG]. 3 577 26.942 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 SUPERFAMILY SSF117023 443 577 2.09E-5 T 13-10-2018 Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 SUPERFAMILY SSF57783 1 98 2.21E-36 T 13-10-2018 Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 Pfam PF10410 DnaB-helicase binding domain of primase 365 413 1.8E-8 T 13-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 SUPERFAMILY SSF56731 112 413 1.96E-99 T 13-10-2018 Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 Gene3D G3DSA:3.40.1360.10 233 359 2.3E-43 T 13-10-2018 Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 Pfam PF01807 CHC2 zinc finger 5 98 1.5E-37 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Atc_2262 ca8ccd180c784728e6d19b1a4f35d3dc 586 Gene3D G3DSA:3.90.580.10 1 100 1.9E-38 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Atc_2858 00f8e424f59d2828d6aae53fbcd144f5 290 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 126 204 2.0E-7 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Atc_2858 00f8e424f59d2828d6aae53fbcd144f5 290 Gene3D G3DSA:3.40.50.10860 16 272 1.6E-80 T 13-10-2018 Atc_2858 00f8e424f59d2828d6aae53fbcd144f5 290 SUPERFAMILY SSF53223 10 111 1.38E-29 T 13-10-2018 Atc_2858 00f8e424f59d2828d6aae53fbcd144f5 290 SUPERFAMILY SSF51735 112 285 2.82E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2858 00f8e424f59d2828d6aae53fbcd144f5 290 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 14 285 2.0E-72 T 13-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Atc_2858 00f8e424f59d2828d6aae53fbcd144f5 290 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 17 99 1.0E-23 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Atc_2858 00f8e424f59d2828d6aae53fbcd144f5 290 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 12 283 32.114 T 13-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Atc_2858 00f8e424f59d2828d6aae53fbcd144f5 290 Gene3D G3DSA:3.40.50.720 111 251 1.6E-80 T 13-10-2018 Atc_m096 e3f8b88a1a570128ab8c84e33585c4fe 48 SUPERFAMILY SSF81901 1 30 4.45E-6 T 13-10-2018 Atc_m096 e3f8b88a1a570128ab8c84e33585c4fe 48 Pfam PF08238 Sel1 repeat 1 26 3.8E-8 T 13-10-2018 IPR006597 Sel1-like repeat Atc_m096 e3f8b88a1a570128ab8c84e33585c4fe 48 Gene3D G3DSA:1.25.40.10 1 45 2.4E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0848 d4608dadd5970983af4286a13c0974c3 451 SMART SM00228 116 188 5.7E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_0848 d4608dadd5970983af4286a13c0974c3 451 SMART SM00228 192 279 8.5E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_0848 d4608dadd5970983af4286a13c0974c3 451 Gene3D G3DSA:2.30.42.10 128 221 8.5E-12 T 13-10-2018 Atc_0848 d4608dadd5970983af4286a13c0974c3 451 Pfam PF02163 Peptidase family M50 9 436 1.7E-78 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Atc_0848 d4608dadd5970983af4286a13c0974c3 451 Pfam PF13180 PDZ domain 224 282 2.9E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Atc_0848 d4608dadd5970983af4286a13c0974c3 451 SUPERFAMILY SSF50156 200 288 6.97E-17 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Atc_0848 d4608dadd5970983af4286a13c0974c3 451 SUPERFAMILY SSF50156 92 189 5.52E-14 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Atc_0848 d4608dadd5970983af4286a13c0974c3 451 Gene3D G3DSA:2.30.42.10 222 308 1.1E-19 T 13-10-2018 Atc_0848 d4608dadd5970983af4286a13c0974c3 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 449 1.5E-110 T 13-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Atc_0688 ef27f0334164e11129e6fa4f8823f003 367 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 86 105 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Atc_0688 ef27f0334164e11129e6fa4f8823f003 367 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 4 339 42.832 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Atc_0688 ef27f0334164e11129e6fa4f8823f003 367 Gene3D G3DSA:3.20.20.70 7 364 1.2E-123 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0688 ef27f0334164e11129e6fa4f8823f003 367 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 295 315 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Atc_0688 ef27f0334164e11129e6fa4f8823f003 367 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 10 356 6.5E-111 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Atc_0688 ef27f0334164e11129e6fa4f8823f003 367 SUPERFAMILY SSF51395 7 357 1.07E-92 T 13-10-2018 Atc_0688 ef27f0334164e11129e6fa4f8823f003 367 Pfam PF01180 Dihydroorotate dehydrogenase 51 343 1.3E-85 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Atc_m094 365a02737456bee7711a34451dd6fcb6 372 Pfam PF04403 Paraquat-inducible protein A 10 163 1.0E-36 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like Atc_m094 365a02737456bee7711a34451dd6fcb6 372 Pfam PF04403 Paraquat-inducible protein A 212 366 2.7E-38 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 Gene3D G3DSA:3.30.2090.10 182 273 3.9E-278 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 SUPERFAMILY SSF82714 187 270 1.12E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 SUPERFAMILY SSF82714 708 793 1.05E-16 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 Gene3D G3DSA:3.30.70.1320 134 330 3.9E-278 T 13-10-2018 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 Gene3D G3DSA:3.30.70.1430 559 656 3.9E-278 T 13-10-2018 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 Gene3D G3DSA:1.20.1640.10 10 504 3.9E-278 T 13-10-2018 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 SUPERFAMILY SSF82866 295 493 5.49E-47 T 13-10-2018 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 Gene3D G3DSA:3.30.70.1440 657 852 3.9E-278 T 13-10-2018 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 SUPERFAMILY SSF82693 557 659 1.41E-14 T 13-10-2018 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 9.5E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 9.5E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.5E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 9.5E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 9.5E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 9.5E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 9.5E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 9.5E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.5E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 Gene3D G3DSA:1.20.1640.10 505 1010 3.9E-278 T 13-10-2018 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 Gene3D G3DSA:3.30.2090.10 707 795 3.9E-278 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 Gene3D G3DSA:3.30.70.1430 40 803 3.9E-278 T 13-10-2018 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 1.3E-253 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 SUPERFAMILY SSF82866 793 1015 6.28E-41 T 13-10-2018 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 SUPERFAMILY SSF82693 42 130 8.37E-23 T 13-10-2018 Atc_2144 65a8e1d7d83c6c2e7ff1518f0f32b43a 1037 SUPERFAMILY SSF82693 138 328 9.42E-21 T 13-10-2018 Atc_0859 ee984182b84d3363fafa2846f34282c5 316 Gene3D G3DSA:3.90.226.10 1 313 8.2E-109 T 13-10-2018 Atc_0859 ee984182b84d3363fafa2846f34282c5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 85 96 1.2E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_0859 ee984182b84d3363fafa2846f34282c5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 166 179 1.2E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_0859 ee984182b84d3363fafa2846f34282c5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 194 203 1.2E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_0859 ee984182b84d3363fafa2846f34282c5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 131 147 1.2E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_0859 ee984182b84d3363fafa2846f34282c5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 150 163 1.2E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_0859 ee984182b84d3363fafa2846f34282c5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 110 128 1.2E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_0859 ee984182b84d3363fafa2846f34282c5 316 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 313 3.1E-142 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_0859 ee984182b84d3363fafa2846f34282c5 316 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 145 7.9E-58 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_0859 ee984182b84d3363fafa2846f34282c5 316 SUPERFAMILY SSF52096 5 312 5.47E-97 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atc_0859 ee984182b84d3363fafa2846f34282c5 316 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 313 48.067 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atc_0528 546f11480a7034d5b9c23495d80b974e 274 TIGRFAM TIGR00067 glut_race: glutamate racemase 3 217 3.1E-44 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atc_0528 546f11480a7034d5b9c23495d80b974e 274 Gene3D G3DSA:3.40.50.1860 3 222 1.7E-56 T 13-10-2018 Atc_0528 546f11480a7034d5b9c23495d80b974e 274 Gene3D G3DSA:3.40.50.1860 92 205 1.7E-56 T 13-10-2018 Atc_0528 546f11480a7034d5b9c23495d80b974e 274 SUPERFAMILY SSF53681 105 252 5.45E-20 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atc_0528 546f11480a7034d5b9c23495d80b974e 274 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 67 75 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atc_0528 546f11480a7034d5b9c23495d80b974e 274 Hamap MF_00258 Glutamate racemase [murI]. 1 256 27.182 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atc_0528 546f11480a7034d5b9c23495d80b974e 274 SUPERFAMILY SSF53681 2 101 2.29E-27 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atc_0528 546f11480a7034d5b9c23495d80b974e 274 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 213 6.2E-22 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atc_1362 e10fb860b7bfda9cb452760032fad990 385 SUPERFAMILY SSF111369 144 261 3.27E-5 T 13-10-2018 Atc_1362 e10fb860b7bfda9cb452760032fad990 385 Gene3D G3DSA:2.40.30.170 246 341 1.8E-26 T 13-10-2018 Atc_1362 e10fb860b7bfda9cb452760032fad990 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 277 1.2E-15 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_1362 e10fb860b7bfda9cb452760032fad990 385 Gene3D G3DSA:1.10.287.470 87 210 1.8E-26 T 13-10-2018 Atc_1362 e10fb860b7bfda9cb452760032fad990 385 Gene3D G3DSA:2.40.50.100 53 245 1.8E-26 T 13-10-2018 Atc_1362 e10fb860b7bfda9cb452760032fad990 385 Pfam PF00529 HlyD membrane-fusion protein of T1SS 38 339 6.7E-7 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_2355 93b0725ce56abef081e8436b97a76567 108 Pfam PF00581 Rhodanese-like domain 8 98 1.2E-15 T 13-10-2018 IPR001763 Rhodanese-like domain Atc_2355 93b0725ce56abef081e8436b97a76567 108 SMART SM00450 8 103 3.5E-20 T 13-10-2018 IPR001763 Rhodanese-like domain Atc_2355 93b0725ce56abef081e8436b97a76567 108 SUPERFAMILY SSF52821 2 106 2.62E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Atc_2355 93b0725ce56abef081e8436b97a76567 108 Gene3D G3DSA:3.40.250.10 7 107 7.1E-28 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Atc_0374 2215a5b2158a00a79bdabef9fb53334d 149 SUPERFAMILY SSF55804 8 146 1.57E-31 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Atc_0374 2215a5b2158a00a79bdabef9fb53334d 149 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 146 2.5E-28 T 13-10-2018 IPR002178 PTS EIIA type-2 domain Atc_0374 2215a5b2158a00a79bdabef9fb53334d 149 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 50 66 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain Atc_0374 2215a5b2158a00a79bdabef9fb53334d 149 Gene3D G3DSA:3.40.930.10 4 147 8.9E-40 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 SUPERFAMILY SSF54980 303 388 9.71E-15 T 13-10-2018 IPR035647 EF-G domain III/V-like Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 7.3E-287 T 13-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 Gene3D G3DSA:3.30.70.870 307 590 9.3E-133 T 13-10-2018 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 SUPERFAMILY SSF54980 399 513 3.6E-32 T 13-10-2018 IPR035647 EF-G domain III/V-like Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 Pfam PF03144 Elongation factor Tu domain 2 219 289 6.8E-11 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 Gene3D G3DSA:3.30.70.240 390 482 9.3E-133 T 13-10-2018 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.3E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.3E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.3E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.3E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.3E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 SUPERFAMILY SSF52540 3 207 3.18E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 3.2E-23 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 Pfam PF00009 Elongation factor Tu GTP binding domain 4 193 1.1E-54 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 SMART SM00838 396 484 1.7E-4 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 Pfam PF00679 Elongation factor G C-terminus 398 481 3.2E-25 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 Gene3D G3DSA:3.40.50.300 3 198 4.8E-64 T 13-10-2018 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 Gene3D G3DSA:2.40.30.10 200 300 4.5E-32 T 13-10-2018 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 SUPERFAMILY SSF50447 151 299 7.07E-33 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 Gene3D G3DSA:2.40.50.250 483 599 9.3E-133 T 13-10-2018 Atc_0297 96a663fe5aed1cc32c18744d1b05fd16 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Atc_1855 e5255905aa46831b925e218f9fb27348 100 Pfam PF01355 High potential iron-sulfur protein 31 96 6.5E-7 T 13-10-2018 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 Atc_1855 e5255905aa46831b925e218f9fb27348 100 SUPERFAMILY SSF57652 34 100 4.84E-17 T 13-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 Atc_1855 e5255905aa46831b925e218f9fb27348 100 Gene3D G3DSA:4.10.490.10 41 100 7.0E-23 T 13-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 Atc_0573 17bbbca8115eae7ab23a05a57fb14dfa 174 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 90 171 4.2E-27 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Atc_0573 17bbbca8115eae7ab23a05a57fb14dfa 174 SUPERFAMILY SSF46767 89 172 1.96E-26 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Atc_0573 17bbbca8115eae7ab23a05a57fb14dfa 174 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 91 172 1.8E-29 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Atc_0573 17bbbca8115eae7ab23a05a57fb14dfa 174 Gene3D G3DSA:1.10.10.10 89 174 1.1E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0573 17bbbca8115eae7ab23a05a57fb14dfa 174 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 138 144 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Atc_2626 b51a31abd9a4e1ac7fac5153d5016cda 294 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 19 267 3.7E-65 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Atc_2626 b51a31abd9a4e1ac7fac5153d5016cda 294 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 11 268 30.644 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Atc_2626 b51a31abd9a4e1ac7fac5153d5016cda 294 Pfam PF08241 Methyltransferase domain 56 151 6.3E-22 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atc_2626 b51a31abd9a4e1ac7fac5153d5016cda 294 SUPERFAMILY SSF53335 17 256 1.34E-39 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2626 b51a31abd9a4e1ac7fac5153d5016cda 294 Gene3D G3DSA:3.40.50.150 4 191 8.9E-36 T 13-10-2018 Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 35 419 2.1E-90 T 13-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 SUPERFAMILY SSF53335 137 419 9.76E-71 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 Gene3D G3DSA:3.40.50.150 226 420 1.9E-60 T 13-10-2018 Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 Gene3D G3DSA:1.10.940.10 5 140 1.4E-16 T 13-10-2018 IPR035926 NusB-like superfamily Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 Gene3D G3DSA:3.30.70.1170 168 225 2.5E-18 T 13-10-2018 Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 Pfam PF01189 16S rRNA methyltransferase RsmB/F 235 417 5.2E-56 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 311 322 - T 13-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 Pfam PF01029 NusB family 24 124 1.5E-7 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 SUPERFAMILY SSF48013 20 144 3.27E-17 T 13-10-2018 IPR035926 NusB-like superfamily Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 Gene3D G3DSA:1.10.287.730 141 164 5.8E-8 T 13-10-2018 Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 362 378 5.2E-27 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 402 419 5.2E-27 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 246 256 5.2E-27 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 312 324 5.2E-27 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atc_0016 10d48cd63c1f40315a1fa6d869499d41 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 217 231 5.2E-27 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atc_2261 8e06aee77648c743b80c4c87281803f8 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 368 605 7.3E-121 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 Gene3D G3DSA:1.10.10.10 445 520 1.9E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2261 8e06aee77648c743b80c4c87281803f8 613 Pfam PF04545 Sigma-70, region 4 544 594 2.9E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 SUPERFAMILY SSF88659 445 518 1.72E-21 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_2261 8e06aee77648c743b80c4c87281803f8 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 1 606 43.048 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 PRINTS PR00046 Major sigma-70 factor signature 566 581 3.0E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 PRINTS PR00046 Major sigma-70 factor signature 396 409 3.0E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 PRINTS PR00046 Major sigma-70 factor signature 581 592 3.0E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 PRINTS PR00046 Major sigma-70 factor signature 420 428 3.0E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 PRINTS PR00046 Major sigma-70 factor signature 545 557 3.0E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 SUPERFAMILY SSF88946 106 439 7.46E-100 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 Pfam PF04542 Sigma-70 region 2 372 441 1.7E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 Pfam PF04546 Sigma-70, non-essential region 130 341 3.2E-54 T 13-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 Gene3D G3DSA:1.10.220.120 1 53 5.4E-24 T 13-10-2018 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 Pfam PF00140 Sigma-70 factor, region 1.2 89 120 2.8E-13 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 Gene3D G3DSA:1.10.601.10 104 441 2.9E-125 T 13-10-2018 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 566 592 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 Gene3D G3DSA:1.10.10.10 521 607 1.2E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2261 8e06aee77648c743b80c4c87281803f8 613 SUPERFAMILY SSF88659 502 605 3.71E-26 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_2261 8e06aee77648c743b80c4c87281803f8 613 Pfam PF03979 Sigma-70 factor, region 1.1 1 73 4.8E-25 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 396 409 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 368 594 9.7E-40 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atc_2261 8e06aee77648c743b80c4c87281803f8 613 Pfam PF04539 Sigma-70 region 3 451 527 1.9E-30 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Atc_1005 a382c81fa57112f98c60ac909d1b8e41 224 Gene3D G3DSA:3.40.50.170 2 205 1.7E-76 T 13-10-2018 Atc_1005 a382c81fa57112f98c60ac909d1b8e41 224 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atc_1005 a382c81fa57112f98c60ac909d1b8e41 224 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 191 6.7E-68 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Atc_1005 a382c81fa57112f98c60ac909d1b8e41 224 SUPERFAMILY SSF53328 4 197 2.62E-61 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atc_1005 a382c81fa57112f98c60ac909d1b8e41 224 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 189 29.749 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Atc_1005 a382c81fa57112f98c60ac909d1b8e41 224 Pfam PF00551 Formyl transferase 4 183 6.0E-54 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atc_1323 899bb7d461ad75f7e8984c9e0d31de9c 794 Gene3D G3DSA:3.40.710.10 252 616 3.4E-74 T 13-10-2018 Atc_1323 899bb7d461ad75f7e8984c9e0d31de9c 794 SUPERFAMILY SSF53955 43 264 1.41E-51 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_1323 899bb7d461ad75f7e8984c9e0d31de9c 794 Gene3D G3DSA:1.10.3810.10 48 246 5.1E-44 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_1323 899bb7d461ad75f7e8984c9e0d31de9c 794 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 701 789 2.5E-16 T 13-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_1323 899bb7d461ad75f7e8984c9e0d31de9c 794 SUPERFAMILY SSF56601 263 659 1.52E-87 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_1323 899bb7d461ad75f7e8984c9e0d31de9c 794 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 38 790 4.4E-236 T 13-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_1323 899bb7d461ad75f7e8984c9e0d31de9c 794 Pfam PF00905 Penicillin binding protein transpeptidase domain 320 539 5.0E-16 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atc_1323 899bb7d461ad75f7e8984c9e0d31de9c 794 Pfam PF00912 Transglycosylase 62 215 3.3E-42 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2742 2f3c862d723a5297543a12b6172e1c5f 164 SUPERFAMILY SSF51261 45 93 1.2E-6 T 13-10-2018 IPR011055 Duplicated hybrid motif Atc_2742 2f3c862d723a5297543a12b6172e1c5f 164 Gene3D G3DSA:2.70.70.10 25 105 2.3E-8 T 13-10-2018 IPR011055 Duplicated hybrid motif Atc_2742 2f3c862d723a5297543a12b6172e1c5f 164 Pfam PF01551 Peptidase family M23 37 89 2.6E-7 T 13-10-2018 IPR016047 Peptidase M23 Atc_0720 38e952817cc3459bc08fd808e839db27 278 SUPERFAMILY SSF54675 2 109 5.1E-31 T 13-10-2018 Atc_0720 38e952817cc3459bc08fd808e839db27 278 Gene3D G3DSA:3.20.20.70 119 266 4.8E-100 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0720 38e952817cc3459bc08fd808e839db27 278 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 20 108 1.0E-25 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Atc_0720 38e952817cc3459bc08fd808e839db27 278 SUPERFAMILY SSF51690 111 275 4.71E-55 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Atc_0720 38e952817cc3459bc08fd808e839db27 278 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 12 275 6.4E-90 T 13-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Atc_0720 38e952817cc3459bc08fd808e839db27 278 Gene3D G3DSA:3.90.1170.20 7 275 4.8E-100 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Atc_0720 38e952817cc3459bc08fd808e839db27 278 PIRSF PIRSF006250 3 277 6.1E-91 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Atc_0720 38e952817cc3459bc08fd808e839db27 278 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 111 275 1.3E-54 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Atc_1427 30a3b5993b8a99e3a21a1d73f9cfba9a 828 Gene3D G3DSA:2.40.50.140 363 460 4.3E-10 T 13-10-2018 Atc_1427 30a3b5993b8a99e3a21a1d73f9cfba9a 828 SUPERFAMILY SSF56601 230 777 6.04E-103 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_1427 30a3b5993b8a99e3a21a1d73f9cfba9a 828 Pfam PF00912 Transglycosylase 78 248 1.9E-53 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_1427 30a3b5993b8a99e3a21a1d73f9cfba9a 828 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 81 763 1.1E-161 T 13-10-2018 Atc_1427 30a3b5993b8a99e3a21a1d73f9cfba9a 828 Pfam PF17092 Penicillin-binding protein OB-like domain 341 467 7.8E-20 T 13-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_1427 30a3b5993b8a99e3a21a1d73f9cfba9a 828 Gene3D G3DSA:1.10.3810.10 64 264 5.6E-64 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_1427 30a3b5993b8a99e3a21a1d73f9cfba9a 828 Gene3D G3DSA:3.40.710.10 461 794 2.0E-102 T 13-10-2018 Atc_1427 30a3b5993b8a99e3a21a1d73f9cfba9a 828 Gene3D G3DSA:3.40.710.10 267 361 6.6E-7 T 13-10-2018 Atc_1427 30a3b5993b8a99e3a21a1d73f9cfba9a 828 SUPERFAMILY SSF53955 58 273 5.91E-65 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_1427 30a3b5993b8a99e3a21a1d73f9cfba9a 828 Pfam PF00905 Penicillin binding protein transpeptidase domain 469 735 1.7E-24 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atc_1915 9ff57c8b64c19d70dae1eb8b197a24db 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 7 481 20.377 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Atc_1915 9ff57c8b64c19d70dae1eb8b197a24db 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 60 444 5.3E-89 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Atc_1915 9ff57c8b64c19d70dae1eb8b197a24db 506 Pfam PF00795 Carbon-nitrogen hydrolase 224 449 4.0E-25 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atc_1915 9ff57c8b64c19d70dae1eb8b197a24db 506 Gene3D G3DSA:3.60.110.10 212 454 1.0E-19 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_1915 9ff57c8b64c19d70dae1eb8b197a24db 506 SUPERFAMILY SSF56317 213 475 1.44E-40 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_0595 5caa6af88b2c62023ca1a035171f740c 229 PIRSF PIRSF002155 1 227 4.0E-79 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0595 5caa6af88b2c62023ca1a035171f740c 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0595 5caa6af88b2c62023ca1a035171f740c 229 Gene3D G3DSA:3.30.190.20 25 222 1.4E-78 T 13-10-2018 Atc_0595 5caa6af88b2c62023ca1a035171f740c 229 Gene3D G3DSA:3.40.50.790 68 159 1.4E-78 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Atc_0595 5caa6af88b2c62023ca1a035171f740c 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.467 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Atc_0595 5caa6af88b2c62023ca1a035171f740c 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 7.1E-103 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Atc_0595 5caa6af88b2c62023ca1a035171f740c 229 SUPERFAMILY SSF56808 7 226 3.14E-80 T 13-10-2018 IPR023674 Ribosomal protein L1-like Atc_0595 5caa6af88b2c62023ca1a035171f740c 229 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 1.0E-50 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Atc_1380 c86af8e1ced9783e561a8094469b8a4b 362 Gene3D G3DSA:3.40.190.10 116 299 7.5E-104 T 13-10-2018 Atc_1380 c86af8e1ced9783e561a8094469b8a4b 362 PIRSF PIRSF002756 2 362 1.6E-86 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Atc_1380 c86af8e1ced9783e561a8094469b8a4b 362 SUPERFAMILY SSF53850 41 362 8.69E-84 T 13-10-2018 Atc_1380 c86af8e1ced9783e561a8094469b8a4b 362 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 42 361 1.7E-106 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Atc_1380 c86af8e1ced9783e561a8094469b8a4b 362 Pfam PF12849 PBP superfamily domain 33 329 1.5E-51 T 13-10-2018 IPR024370 PBP domain Atc_1380 c86af8e1ced9783e561a8094469b8a4b 362 Gene3D G3DSA:3.40.190.10 44 350 7.5E-104 T 13-10-2018 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 Pfam PF14841 FliG middle domain 119 190 1.0E-22 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 PIRSF PIRSF003161 2 337 2.6E-115 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 5 335 1.2E-102 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 Gene3D G3DSA:1.10.220.30 1 94 6.6E-21 T 13-10-2018 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 SUPERFAMILY SSF48029 117 329 1.83E-63 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 Pfam PF14842 FliG N-terminal domain 7 107 3.4E-32 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 Pfam PF01706 FliG C-terminal domain 222 328 9.5E-42 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 Gene3D G3DSA:1.10.220.30 199 337 1.7E-46 T 13-10-2018 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 SUPERFAMILY SSF48029 9 121 1.73E-23 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 4.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 8 24 4.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 199 224 4.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 37 63 4.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 117 140 4.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 4.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 4.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atc_1485 ce2fce822cde0dadac4e8114c01eb92d 337 Gene3D G3DSA:1.10.220.30 95 194 3.6E-28 T 13-10-2018 Atc_2203 15cf989a2f720181ebc3c24086da6829 256 Gene3D G3DSA:3.40.50.1820 14 240 4.7E-46 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_2203 15cf989a2f720181ebc3c24086da6829 256 SUPERFAMILY SSF53474 23 231 7.1E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_2203 15cf989a2f720181ebc3c24086da6829 256 Pfam PF12146 Serine aminopeptidase, S33 33 137 1.1E-14 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 Atc_2356 07c9dfc235473b7412b92c7ab5ba1d46 345 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 33 44 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2356 07c9dfc235473b7412b92c7ab5ba1d46 345 SMART SM00729 27 231 4.6E-11 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atc_2356 07c9dfc235473b7412b92c7ab5ba1d46 345 Pfam PF13353 4Fe-4S single cluster domain 33 136 1.4E-7 T 13-10-2018 Atc_2356 07c9dfc235473b7412b92c7ab5ba1d46 345 SUPERFAMILY SSF102114 17 323 2.22E-68 T 13-10-2018 Atc_2356 07c9dfc235473b7412b92c7ab5ba1d46 345 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 18 345 36.845 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2356 07c9dfc235473b7412b92c7ab5ba1d46 345 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 18 345 2.7E-108 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2356 07c9dfc235473b7412b92c7ab5ba1d46 345 Pfam PF04055 Radical SAM superfamily 32 188 2.3E-28 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_2356 07c9dfc235473b7412b92c7ab5ba1d46 345 Pfam PF06463 Molybdenum Cofactor Synthesis C 198 327 4.4E-34 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2356 07c9dfc235473b7412b92c7ab5ba1d46 345 Gene3D G3DSA:3.20.20.70 15 345 5.0E-87 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 Gene3D G3DSA:3.30.870.10 343 526 1.7E-66 T 13-10-2018 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 SUPERFAMILY SSF56024 526 701 1.57E-61 T 13-10-2018 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 Pfam PF13090 Polyphosphate kinase C-terminal domain 356 698 8.8E-141 T 13-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 Pfam PF13089 Polyphosphate kinase N-terminal domain 32 137 9.4E-34 T 13-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 Hamap MF_00347 Polyphosphate kinase [ppk]. 29 707 27.166 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 Pfam PF02503 Polyphosphate kinase middle domain 147 346 1.9E-59 T 13-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 SUPERFAMILY SSF140356 29 132 3.53E-34 T 13-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 32 698 2.1E-266 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 Gene3D G3DSA:3.30.870.10 531 707 2.8E-59 T 13-10-2018 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 PIRSF PIRSF015589 13 708 5.9E-268 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 Gene3D G3DSA:3.30.1840.10 26 337 3.3E-98 T 13-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 SUPERFAMILY SSF56024 340 521 5.65E-54 T 13-10-2018 Atc_2146 0018bd7340816c9fba5b92cb5cf7629e 713 SUPERFAMILY SSF143724 135 339 4.51E-60 T 13-10-2018 Atc_1250 c4a6e42090b1d45577800726cc4325a4 863 Pfam PF04851 Type III restriction enzyme, res subunit 85 281 4.5E-15 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Atc_1250 c4a6e42090b1d45577800726cc4325a4 863 SUPERFAMILY SSF52540 84 467 6.61E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1250 c4a6e42090b1d45577800726cc4325a4 863 Gene3D G3DSA:3.40.50.300 374 497 6.1E-7 T 13-10-2018 Atc_0478 7a7215f8e24432576e6be1f60d8d0296 359 SUPERFAMILY SSF82861 87 170 2.48E-8 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Atc_0478 7a7215f8e24432576e6be1f60d8d0296 359 Gene3D G3DSA:2.30.30.60 187 236 6.3E-16 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Atc_0478 7a7215f8e24432576e6be1f60d8d0296 359 SUPERFAMILY SSF50182 172 236 1.99E-19 T 13-10-2018 IPR010920 LSM domain superfamily Atc_0478 7a7215f8e24432576e6be1f60d8d0296 359 SUPERFAMILY SSF82689 239 342 6.54E-16 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Atc_0478 7a7215f8e24432576e6be1f60d8d0296 359 Pfam PF00924 Mechanosensitive ion channel 130 330 1.6E-45 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Atc_0478 7a7215f8e24432576e6be1f60d8d0296 359 Gene3D G3DSA:3.30.70.100 239 336 9.3E-11 T 13-10-2018 Atc_2518 a4c7d6e14409112fe62b4d30a151106a 458 Gene3D G3DSA:3.40.50.12780 33 347 4.7E-38 T 13-10-2018 Atc_2518 a4c7d6e14409112fe62b4d30a151106a 458 Pfam PF00501 AMP-binding enzyme 128 354 8.7E-22 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atc_2518 a4c7d6e14409112fe62b4d30a151106a 458 SUPERFAMILY SSF56801 40 445 4.45E-48 T 13-10-2018 Atc_0790 bc8e416be5e16154062948e39eda31fc 322 Pfam PF05598 Transposase domain (DUF772) 54 129 3.1E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0790 bc8e416be5e16154062948e39eda31fc 322 Pfam PF01609 Transposase DDE domain 145 310 7.2E-26 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1311 6b95cfbf49b655f9ff78b6181696d5d5 304 Gene3D G3DSA:3.40.50.300 8 275 4.0E-85 T 13-10-2018 Atc_1311 6b95cfbf49b655f9ff78b6181696d5d5 304 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 297 27.529 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Atc_1311 6b95cfbf49b655f9ff78b6181696d5d5 304 SUPERFAMILY SSF52540 4 229 2.16E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1311 6b95cfbf49b655f9ff78b6181696d5d5 304 Pfam PF01715 IPP transferase 38 275 6.1E-72 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Atc_1311 6b95cfbf49b655f9ff78b6181696d5d5 304 Gene3D G3DSA:1.10.20.140 111 179 4.0E-85 T 13-10-2018 Atc_1311 6b95cfbf49b655f9ff78b6181696d5d5 304 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 276 4.0E-81 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Atc_0012 159f75e8ba5f192fac79233ca7095a72 364 SUPERFAMILY SSF47781 3 54 2.32E-7 T 13-10-2018 IPR010994 RuvA domain 2-like Atc_0012 159f75e8ba5f192fac79233ca7095a72 364 SUPERFAMILY SSF46785 290 358 8.84E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0012 159f75e8ba5f192fac79233ca7095a72 364 SUPERFAMILY SSF102405 80 283 1.98E-41 T 13-10-2018 Atc_0012 159f75e8ba5f192fac79233ca7095a72 364 Pfam PF02481 DNA recombination-mediator protein A 77 274 9.1E-69 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Atc_0012 159f75e8ba5f192fac79233ca7095a72 364 Gene3D G3DSA:3.40.50.450 1 287 7.0E-99 T 13-10-2018 Atc_0012 159f75e8ba5f192fac79233ca7095a72 364 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 283 1.5E-69 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Atc_0493 f72c71c20a60e0af5f77597db08817cb 291 SMART SM01126 121 262 5.7E-37 T 13-10-2018 IPR024445 ISXO2-like transposase domain Atc_0493 f72c71c20a60e0af5f77597db08817cb 291 Pfam PF12762 ISXO2-like transposase domain 122 262 2.2E-24 T 13-10-2018 IPR024445 ISXO2-like transposase domain Atc_0493 f72c71c20a60e0af5f77597db08817cb 291 Pfam PF12760 Transposase zinc-ribbon domain 9 53 3.4E-15 T 13-10-2018 IPR024442 Transposase, zinc-ribbon Atc_2528 33ee644598be294f0617904e3ad7c0b7 185 Gene3D G3DSA:3.90.280.10 1 145 1.0E-30 T 13-10-2018 IPR036610 PEBP-like superfamily Atc_2528 33ee644598be294f0617904e3ad7c0b7 185 Pfam PF01161 Phosphatidylethanolamine-binding protein 18 141 1.1E-16 T 13-10-2018 IPR008914 Phosphatidylethanolamine-binding protein Atc_2528 33ee644598be294f0617904e3ad7c0b7 185 SUPERFAMILY SSF49777 5 142 1.57E-23 T 13-10-2018 IPR036610 PEBP-like superfamily Atc_2252 e7dbf1af1bc8529c4f8ed338f4aa58b7 474 PRINTS PR00095 Anthranilate synthase component I signature 400 414 2.2E-14 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_2252 e7dbf1af1bc8529c4f8ed338f4aa58b7 474 PRINTS PR00095 Anthranilate synthase component I signature 305 318 2.2E-14 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_2252 e7dbf1af1bc8529c4f8ed338f4aa58b7 474 PRINTS PR00095 Anthranilate synthase component I signature 291 304 2.2E-14 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_2252 e7dbf1af1bc8529c4f8ed338f4aa58b7 474 PRINTS PR00095 Anthranilate synthase component I signature 385 399 2.2E-14 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_2252 e7dbf1af1bc8529c4f8ed338f4aa58b7 474 Pfam PF00425 chorismate binding enzyme 190 443 1.6E-91 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Atc_2252 e7dbf1af1bc8529c4f8ed338f4aa58b7 474 SUPERFAMILY SSF56322 19 452 1.7E-123 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Atc_2252 e7dbf1af1bc8529c4f8ed338f4aa58b7 474 Pfam PF04715 Anthranilate synthase component I, N terminal region 21 151 5.1E-18 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_2252 e7dbf1af1bc8529c4f8ed338f4aa58b7 474 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 109 447 5.0E-104 T 13-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 Atc_2252 e7dbf1af1bc8529c4f8ed338f4aa58b7 474 Gene3D G3DSA:3.60.120.10 6 452 8.7E-144 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Atc_1834 7484768f05596f80aa48f8258452e460 348 Gene3D G3DSA:3.30.420.470 146 336 6.2E-10 T 13-10-2018 Atc_1834 7484768f05596f80aa48f8258452e460 348 Pfam PF13518 Helix-turn-helix domain 21 68 9.2E-6 T 13-10-2018 Atc_1834 7484768f05596f80aa48f8258452e460 348 Pfam PF13358 DDE superfamily endonuclease 173 311 3.3E-35 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Atc_1834 7484768f05596f80aa48f8258452e460 348 Pfam PF13592 Winged helix-turn helix 100 156 1.7E-22 T 13-10-2018 IPR025959 Winged helix-turn helix domain Atc_1834 7484768f05596f80aa48f8258452e460 348 SUPERFAMILY SSF46689 13 133 1.88E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 317 323 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 312 539 1.6E-33 T 13-10-2018 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 Gene3D G3DSA:1.20.1110.10 570 616 1.2E-22 T 13-10-2018 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 SUPERFAMILY SSF81660 326 460 2.75E-31 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 SUPERFAMILY SSF81653 116 210 1.44E-21 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 SUPERFAMILY SSF56784 313 576 2.32E-39 T 13-10-2018 IPR036412 HAD-like superfamily Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 SUPERFAMILY SSF81665 32 309 8.24E-10 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 Gene3D G3DSA:3.40.1110.10 326 460 2.4E-47 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 10 685 0.0 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 11 688 39.744 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 Gene3D G3DSA:3.40.50.1000 501 569 1.2E-22 T 13-10-2018 IPR023214 HAD superfamily Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 Pfam PF00122 E1-E2 ATPase 117 293 4.1E-35 T 13-10-2018 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 75 346 1.8E-31 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 376 614 4.7E-45 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 Gene3D G3DSA:2.70.150.20 106 214 1.8E-26 T 13-10-2018 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 157 171 2.4E-23 T 13-10-2018 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 2.4E-23 T 13-10-2018 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 548 560 2.4E-23 T 13-10-2018 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 525 544 2.4E-23 T 13-10-2018 Atc_0286 f9a9e1905fabe6fcdff48c38632845c4 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 472 482 2.4E-23 T 13-10-2018 Atc_0580 f7282c48db113d50d7fd422ed906a8fb 173 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 12 163 73.961 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Atc_0580 f7282c48db113d50d7fd422ed906a8fb 173 Pfam PF03477 ATP cone domain 60 146 1.8E-15 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Atc_0580 f7282c48db113d50d7fd422ed906a8fb 173 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 11 157 1.9E-59 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Atc_m022 3d97531667cddbd95926042d038170b8 283 Gene3D G3DSA:3.30.390.50 178 282 2.2E-17 T 13-10-2018 Atc_m022 3d97531667cddbd95926042d038170b8 283 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 171 3.1E-40 T 13-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Atc_m022 3d97531667cddbd95926042d038170b8 283 Gene3D G3DSA:3.30.465.10 2 173 2.8E-46 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atc_m022 3d97531667cddbd95926042d038170b8 283 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 179 279 7.1E-17 T 13-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Atc_m022 3d97531667cddbd95926042d038170b8 283 SUPERFAMILY SSF56176 3 171 2.45E-44 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atc_m022 3d97531667cddbd95926042d038170b8 283 SUPERFAMILY SSF55447 178 279 4.45E-19 T 13-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Atc_m022 3d97531667cddbd95926042d038170b8 283 SMART SM01092 178 281 3.3E-16 T 13-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Atc_2159 7ed501e25d6cb43d23ff36ffb1319930 316 SUPERFAMILY SSF82866 72 296 6.8E-41 T 13-10-2018 Atc_2159 7ed501e25d6cb43d23ff36ffb1319930 316 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.1E-30 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atc_2159 7ed501e25d6cb43d23ff36ffb1319930 316 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 1.1E-30 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atc_2159 7ed501e25d6cb43d23ff36ffb1319930 316 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 1.1E-30 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atc_2159 7ed501e25d6cb43d23ff36ffb1319930 316 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 1.1E-30 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atc_2159 7ed501e25d6cb43d23ff36ffb1319930 316 Pfam PF07549 SecD/SecF GG Motif 35 57 1.0E-6 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Atc_2159 7ed501e25d6cb43d23ff36ffb1319930 316 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 296 28.964 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Atc_2159 7ed501e25d6cb43d23ff36ffb1319930 316 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 3.6E-77 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Atc_2159 7ed501e25d6cb43d23ff36ffb1319930 316 Pfam PF02355 Protein export membrane protein 118 293 3.0E-67 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Atc_2159 7ed501e25d6cb43d23ff36ffb1319930 316 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 119 282 2.9E-55 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atc_2159 7ed501e25d6cb43d23ff36ffb1319930 316 Gene3D G3DSA:1.20.1640.10 98 303 2.0E-9 T 13-10-2018 Atc_0088 2d5f0190163b18a5755992e6cad2fe0f 314 Pfam PF00005 ABC transporter 25 168 2.2E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0088 2d5f0190163b18a5755992e6cad2fe0f 314 SMART SM00382 34 219 1.0E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0088 2d5f0190163b18a5755992e6cad2fe0f 314 Gene3D G3DSA:3.40.50.300 4 236 1.1E-69 T 13-10-2018 Atc_0088 2d5f0190163b18a5755992e6cad2fe0f 314 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0088 2d5f0190163b18a5755992e6cad2fe0f 314 SUPERFAMILY SSF52540 9 231 6.02E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0368 73e200faf29668350dba9242283b2666 182 Gene3D G3DSA:3.40.50.1000 10 179 1.1E-47 T 13-10-2018 IPR023214 HAD superfamily Atc_0368 73e200faf29668350dba9242283b2666 182 SUPERFAMILY SSF56784 11 172 3.68E-38 T 13-10-2018 IPR036412 HAD-like superfamily Atc_0368 73e200faf29668350dba9242283b2666 182 PIRSF PIRSF006118 2 176 1.5E-64 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Atc_0368 73e200faf29668350dba9242283b2666 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 14 166 2.4E-44 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 SMART SM00278 593 612 25.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 SMART SM00278 561 580 39.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 Hamap MF_00203 UvrABC system protein C [uvrC]. 14 612 27.134 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 Gene3D G3DSA:3.40.1440.10 15 112 2.0E-32 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 Gene3D G3DSA:1.10.150.20 555 613 6.6E-20 T 13-10-2018 Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 SUPERFAMILY SSF82771 27 110 1.31E-22 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 Pfam PF01541 GIY-YIG catalytic domain 28 103 3.2E-12 T 13-10-2018 IPR000305 GIY-YIG endonuclease Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 Gene3D G3DSA:3.30.420.340 385 554 2.9E-44 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 SMART SM00465 27 108 2.3E-21 T 13-10-2018 IPR000305 GIY-YIG endonuclease Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 SUPERFAMILY SSF47781 530 614 1.02E-20 T 13-10-2018 IPR010994 RuvA domain 2-like Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 SUPERFAMILY SSF46600 202 253 1.44E-13 T 13-10-2018 IPR036876 UVR domain superfamily Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 Pfam PF14520 Helix-hairpin-helix domain 562 610 9.5E-8 T 13-10-2018 Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 391 547 9.1E-47 T 13-10-2018 IPR001162 UvrC family homology region Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 Pfam PF02151 UvrB/uvrC motif 215 248 4.2E-7 T 13-10-2018 IPR001943 UVR domain GO:0005515 Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 Gene3D G3DSA:4.10.860.10 209 251 1.4E-5 T 13-10-2018 Atc_1822 0a6345f3db58f73a078b226cbabc0157 620 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 20 593 1.1E-172 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 SUPERFAMILY SSF48256 5 380 5.36E-130 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 Gene3D G3DSA:1.10.580.10 19 359 2.4E-128 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 PIRSF PIRSF001369 1 385 2.3E-140 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 Gene3D G3DSA:1.10.230.10 230 335 2.4E-128 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 PRINTS PR00143 Citrate synthase signature 318 334 9.5E-44 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 PRINTS PR00143 Citrate synthase signature 203 231 9.5E-44 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 PRINTS PR00143 Citrate synthase signature 338 352 9.5E-44 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 PRINTS PR00143 Citrate synthase signature 181 196 9.5E-44 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 PRINTS PR00143 Citrate synthase signature 256 276 9.5E-44 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 PRINTS PR00143 Citrate synthase signature 132 145 9.5E-44 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Atc_0272 98a13ead12f5cad3be6cefa3e63a4c71 389 Pfam PF00285 Citrate synthase, C-terminal domain 9 368 2.8E-129 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Atc_2687 db9cbc6feb91ce2c9c0d4090b331f9a7 99 ProDom PD028561 MEMBRANE IMMUNITY SUPERINFECTION GP66 PROTEIN IMM GP75 IMM RB69 INTEGRAL 39 79 5.0E-7 T 13-10-2018 IPR016410 Bacteriophage-associated immunity protein Atc_2687 db9cbc6feb91ce2c9c0d4090b331f9a7 99 Pfam PF14373 Superinfection immunity protein 39 80 8.1E-17 T 13-10-2018 IPR016410 Bacteriophage-associated immunity protein Atc_2p05 43e543a728d8d033ee575243d0be2182 883 Pfam PF03389 MobA/MobL family 64 226 3.2E-15 T 13-10-2018 IPR005053 MobA/MobL protein Atc_2p05 43e543a728d8d033ee575243d0be2182 883 Gene3D G3DSA:3.30.930.30 2 210 1.5E-48 T 13-10-2018 Atc_0210 d7e0a0d3ad8c27d504d39fe4b48aa379 198 Gene3D G3DSA:3.40.50.2000 7 196 2.9E-39 T 13-10-2018 Atc_0210 d7e0a0d3ad8c27d504d39fe4b48aa379 198 Pfam PF00534 Glycosyl transferases group 1 18 175 1.3E-26 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Atc_0210 d7e0a0d3ad8c27d504d39fe4b48aa379 198 SUPERFAMILY SSF53756 10 196 3.41E-50 T 13-10-2018 Atc_1654 ed9e06c9649e0eaf55fc83b0dfe1fcf8 163 SUPERFAMILY SSF52833 11 162 4.88E-49 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1654 ed9e06c9649e0eaf55fc83b0dfe1fcf8 163 PIRSF PIRSF000239 6 163 6.5E-30 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atc_1654 ed9e06c9649e0eaf55fc83b0dfe1fcf8 163 Pfam PF00578 AhpC/TSA family 13 141 2.6E-36 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atc_1654 ed9e06c9649e0eaf55fc83b0dfe1fcf8 163 Gene3D G3DSA:3.40.30.10 9 161 3.2E-45 T 13-10-2018 Atc_2151 c0a4da536f7646fb1dfb360b3668f838 285 SUPERFAMILY SSF52833 126 267 4.64E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2151 c0a4da536f7646fb1dfb360b3668f838 285 Pfam PF10411 Disulfide bond isomerase protein N-terminus 71 97 1.0E-4 T 13-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal Atc_2151 c0a4da536f7646fb1dfb360b3668f838 285 Gene3D G3DSA:3.10.450.70 44 109 7.3E-16 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Atc_2151 c0a4da536f7646fb1dfb360b3668f838 285 Gene3D G3DSA:3.40.30.10 133 280 1.5E-28 T 13-10-2018 Atc_2151 c0a4da536f7646fb1dfb360b3668f838 285 Pfam PF13098 Thioredoxin-like domain 135 257 1.4E-11 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_2151 c0a4da536f7646fb1dfb360b3668f838 285 SUPERFAMILY SSF54423 54 100 1.7E-8 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 PIRSF PIRSF000110 1 488 6.1E-182 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 187 1.1E-59 T 13-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 486 78.928 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 SUPERFAMILY SSF51735 7 190 5.91E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0952 f36ea06653469fb08b7449da6483d80e 488 Gene3D G3DSA:3.40.50.720 9 434 1.5E-173 T 13-10-2018 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 237 253 1.2E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 167 195 1.2E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 143 156 1.2E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 219 236 1.2E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 328 354 1.2E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 177 183 - T 13-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 486 8.9E-177 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 189 485 1.9E-112 T 13-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 SUPERFAMILY SSF55347 177 486 8.83E-111 T 13-10-2018 Atc_0952 f36ea06653469fb08b7449da6483d80e 488 Gene3D G3DSA:3.30.360.10 177 475 1.5E-173 T 13-10-2018 Atc_2235 7a8f4ba838258d7f49aa802a2d8e2836 294 Pfam PF04794 YdjC-like protein 10 278 1.2E-56 T 13-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like Atc_2235 7a8f4ba838258d7f49aa802a2d8e2836 294 Gene3D G3DSA:3.20.20.370 7 291 2.9E-51 T 13-10-2018 Atc_2235 7a8f4ba838258d7f49aa802a2d8e2836 294 TIGRFAM TIGR03473 HpnK: hopanoid biosynthesis associated protein HpnK 9 290 6.9E-117 T 13-10-2018 IPR017836 Hopanoid biosynthesis associated protein HpnK Atc_2235 7a8f4ba838258d7f49aa802a2d8e2836 294 SUPERFAMILY SSF88713 8 290 8.89E-68 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atc_1181 07da74993aaa36aa4dece4d5e6ea93f7 64 Gene3D G3DSA:3.30.920.30 1 59 1.2E-27 T 13-10-2018 IPR038570 HicA superfamily Atc_1181 07da74993aaa36aa4dece4d5e6ea93f7 64 SUPERFAMILY SSF54786 1 63 1.18E-19 T 13-10-2018 Atc_1181 07da74993aaa36aa4dece4d5e6ea93f7 64 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 59 8.3E-22 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Atc_1525 27cfa8508584531ac5fcf36b9e534931 462 Pfam PF07690 Major Facilitator Superfamily 30 358 1.3E-37 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_1525 27cfa8508584531ac5fcf36b9e534931 462 Gene3D G3DSA:3.30.70.100 401 462 2.3E-9 T 13-10-2018 Atc_1525 27cfa8508584531ac5fcf36b9e534931 462 Gene3D G3DSA:1.20.1250.20 8 400 1.0E-78 T 13-10-2018 Atc_1525 27cfa8508584531ac5fcf36b9e534931 462 SUPERFAMILY SSF103473 12 402 1.01E-55 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_1525 27cfa8508584531ac5fcf36b9e534931 462 PRINTS PR01035 Tetracycline resistance protein signature 347 370 6.7E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atc_1525 27cfa8508584531ac5fcf36b9e534931 462 PRINTS PR01035 Tetracycline resistance protein signature 172 192 6.7E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atc_1525 27cfa8508584531ac5fcf36b9e534931 462 PRINTS PR01035 Tetracycline resistance protein signature 27 43 6.7E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atc_1525 27cfa8508584531ac5fcf36b9e534931 462 PRINTS PR01035 Tetracycline resistance protein signature 56 75 6.7E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atc_1525 27cfa8508584531ac5fcf36b9e534931 462 PRINTS PR01035 Tetracycline resistance protein signature 114 135 6.7E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atc_0455 15c9df4b076547e8562e6557f6205706 439 SUPERFAMILY SSF56954 2 435 1.57E-46 T 13-10-2018 Atc_0455 15c9df4b076547e8562e6557f6205706 439 Gene3D G3DSA:1.20.1600.10 56 437 3.2E-42 T 13-10-2018 Atc_0455 15c9df4b076547e8562e6557f6205706 439 Pfam PF02321 Outer membrane efflux protein 259 430 1.0E-13 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_0455 15c9df4b076547e8562e6557f6205706 439 Pfam PF02321 Outer membrane efflux protein 64 233 3.7E-6 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_2792 5435c9f52cfd37dee219e50c591c7488 365 Gene3D G3DSA:3.40.50.10800 104 363 7.0E-82 T 13-10-2018 Atc_2792 5435c9f52cfd37dee219e50c591c7488 365 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 19 365 1.0E-88 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Atc_2792 5435c9f52cfd37dee219e50c591c7488 365 Pfam PF02445 Quinolinate synthetase A protein 22 363 4.0E-104 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Atc_2792 5435c9f52cfd37dee219e50c591c7488 365 Gene3D G3DSA:3.40.50.10800 23 345 7.0E-82 T 13-10-2018 Atc_2792 5435c9f52cfd37dee219e50c591c7488 365 SUPERFAMILY SSF142754 25 363 1.44E-94 T 13-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Atc_2792 5435c9f52cfd37dee219e50c591c7488 365 Gene3D G3DSA:3.40.50.10800 225 315 7.0E-82 T 13-10-2018 Atc_2792 5435c9f52cfd37dee219e50c591c7488 365 Hamap MF_00569 Quinolinate synthase A [nadA]. 15 364 48.142 T 13-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Atc_1523 7c6bcefed8e51a028681350446a6b0ce 400 Pfam PF00654 Voltage gated chloride channel 18 367 6.0E-70 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1523 7c6bcefed8e51a028681350446a6b0ce 400 PRINTS PR00762 Chloride channel signature 32 49 3.0E-18 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1523 7c6bcefed8e51a028681350446a6b0ce 400 PRINTS PR00762 Chloride channel signature 336 355 3.0E-18 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1523 7c6bcefed8e51a028681350446a6b0ce 400 PRINTS PR00762 Chloride channel signature 318 334 3.0E-18 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1523 7c6bcefed8e51a028681350446a6b0ce 400 PRINTS PR00762 Chloride channel signature 283 303 3.0E-18 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1523 7c6bcefed8e51a028681350446a6b0ce 400 PRINTS PR00762 Chloride channel signature 112 131 3.0E-18 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1523 7c6bcefed8e51a028681350446a6b0ce 400 SUPERFAMILY SSF81340 7 389 6.02E-79 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Atc_1523 7c6bcefed8e51a028681350446a6b0ce 400 Gene3D G3DSA:1.10.3080.10 1 387 6.2E-79 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Atc_m034 f18bd6086be4d1783b0fb9b57498d414 310 Pfam PF00589 Phage integrase family 132 301 2.4E-28 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_m034 f18bd6086be4d1783b0fb9b57498d414 310 SUPERFAMILY SSF56349 126 304 1.74E-41 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_m034 f18bd6086be4d1783b0fb9b57498d414 310 Gene3D G3DSA:1.10.150.130 14 112 2.8E-11 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_m034 f18bd6086be4d1783b0fb9b57498d414 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 24 93 1.5E-6 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Atc_m034 f18bd6086be4d1783b0fb9b57498d414 310 Gene3D G3DSA:1.10.443.10 132 309 2.5E-40 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_m182 6258c5f58dbc7e76ec398ac590f98af8 413 Gene3D G3DSA:3.30.420.10 122 293 1.5E-7 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_m182 6258c5f58dbc7e76ec398ac590f98af8 413 SUPERFAMILY SSF53098 124 291 1.09E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_m182 6258c5f58dbc7e76ec398ac590f98af8 413 Pfam PF00665 Integrase core domain 124 251 1.6E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_0470 c7dc73429fe8ff527b0c2075ef8c2342 58 SUPERFAMILY SSF54862 3 50 2.18E-11 T 13-10-2018 Atc_0470 c7dc73429fe8ff527b0c2075ef8c2342 58 Gene3D G3DSA:3.30.70.20 1 56 1.6E-19 T 13-10-2018 Atc_1302 6b8f73ebf9925419be5690f3becfb0fe 572 Pfam PF13177 DNA polymerase III, delta subunit 34 192 2.2E-43 T 13-10-2018 Atc_1302 6b8f73ebf9925419be5690f3becfb0fe 572 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 246 368 1.0E-15 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Atc_1302 6b8f73ebf9925419be5690f3becfb0fe 572 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 17 364 2.3E-120 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Atc_1302 6b8f73ebf9925419be5690f3becfb0fe 572 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 55 73 1.8E-6 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_1302 6b8f73ebf9925419be5690f3becfb0fe 572 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 138 156 1.8E-6 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Atc_1302 6b8f73ebf9925419be5690f3becfb0fe 572 SUPERFAMILY SSF52540 48 238 2.1E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1302 6b8f73ebf9925419be5690f3becfb0fe 572 Gene3D G3DSA:1.20.272.10 256 371 6.9E-14 T 13-10-2018 Atc_1302 6b8f73ebf9925419be5690f3becfb0fe 572 Gene3D G3DSA:3.40.50.300 27 191 2.0E-100 T 13-10-2018 Atc_1302 6b8f73ebf9925419be5690f3becfb0fe 572 SUPERFAMILY SSF48019 259 370 2.72E-15 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Atc_1302 6b8f73ebf9925419be5690f3becfb0fe 572 Gene3D G3DSA:1.10.8.60 22 254 2.0E-100 T 13-10-2018 Atc_1302 6b8f73ebf9925419be5690f3becfb0fe 572 SMART SM00382 51 193 1.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2818 498c5151be1fb79cb12c9666a214bba4 496 SUPERFAMILY SSF50249 39 133 1.9E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_2818 498c5151be1fb79cb12c9666a214bba4 496 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 433 1.0E-158 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Atc_2818 498c5151be1fb79cb12c9666a214bba4 496 Pfam PF10150 Ribonuclease E/G family 129 400 4.4E-103 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Atc_2818 498c5151be1fb79cb12c9666a214bba4 496 Gene3D G3DSA:2.40.50.140 31 133 3.3E-30 T 13-10-2018 Atc_2818 498c5151be1fb79cb12c9666a214bba4 496 Gene3D G3DSA:3.40.1260.20 409 496 8.8E-9 T 13-10-2018 Atc_2818 498c5151be1fb79cb12c9666a214bba4 496 Pfam PF00575 S1 RNA binding domain 38 127 7.6E-7 T 13-10-2018 IPR003029 S1 domain GO:0003676 Atc_2818 498c5151be1fb79cb12c9666a214bba4 496 SMART SM00316 37 127 2.7E-10 T 13-10-2018 IPR022967 RNA-binding domain, S1 Atc_2843 df3090774d0f57b2544530566aa4ba2d 282 Gene3D G3DSA:3.40.50.150 2 200 3.5E-65 T 13-10-2018 Atc_2843 df3090774d0f57b2544530566aa4ba2d 282 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 7 265 53.039 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Atc_2843 df3090774d0f57b2544530566aa4ba2d 282 Gene3D G3DSA:1.10.8.100 201 265 3.4E-17 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Atc_2843 df3090774d0f57b2544530566aa4ba2d 282 SMART SM00650 23 198 5.6E-76 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Atc_2843 df3090774d0f57b2544530566aa4ba2d 282 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 69 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Atc_2843 df3090774d0f57b2544530566aa4ba2d 282 SUPERFAMILY SSF53335 7 265 3.24E-72 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2843 df3090774d0f57b2544530566aa4ba2d 282 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 8 263 5.9E-77 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Atc_2843 df3090774d0f57b2544530566aa4ba2d 282 Pfam PF00398 Ribosomal RNA adenine dimethylase 8 264 2.2E-57 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Atc_2328 5453d0363102b13b0301257e5ef1dc81 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.5E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2328 5453d0363102b13b0301257e5ef1dc81 310 Gene3D G3DSA:3.40.190.290 91 301 5.6E-50 T 13-10-2018 Atc_2328 5453d0363102b13b0301257e5ef1dc81 310 Pfam PF03466 LysR substrate binding domain 87 296 1.1E-50 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_2328 5453d0363102b13b0301257e5ef1dc81 310 SUPERFAMILY SSF53850 86 298 2.01E-50 T 13-10-2018 Atc_2328 5453d0363102b13b0301257e5ef1dc81 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.8E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2328 5453d0363102b13b0301257e5ef1dc81 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.8E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2328 5453d0363102b13b0301257e5ef1dc81 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.8E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2328 5453d0363102b13b0301257e5ef1dc81 310 Gene3D G3DSA:1.10.10.10 1 90 2.0E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2328 5453d0363102b13b0301257e5ef1dc81 310 SUPERFAMILY SSF46785 4 111 6.44E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_2099 9344d0e2193821d4aea9b0d022b4e854 98 Hamap MF_00984 Single-stranded DNA-binding protein. 4 97 29.069 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Atc_2099 9344d0e2193821d4aea9b0d022b4e854 98 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 95 1.7E-42 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Atc_2099 9344d0e2193821d4aea9b0d022b4e854 98 Pfam PF00436 Single-strand binding protein family 4 95 9.5E-35 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Atc_2099 9344d0e2193821d4aea9b0d022b4e854 98 PIRSF PIRSF002070 1 97 2.1E-30 T 13-10-2018 Atc_2099 9344d0e2193821d4aea9b0d022b4e854 98 SUPERFAMILY SSF50249 3 95 1.58E-40 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_2099 9344d0e2193821d4aea9b0d022b4e854 98 Gene3D G3DSA:2.40.50.140 1 98 3.9E-40 T 13-10-2018 Atc_0924 233f16fcf2b803b9e16d7eea09c94db8 226 Gene3D G3DSA:3.40.50.1000 23 213 4.4E-35 T 13-10-2018 IPR023214 HAD superfamily Atc_0924 233f16fcf2b803b9e16d7eea09c94db8 226 Gene3D G3DSA:1.20.1440.100 32 104 4.4E-35 T 13-10-2018 Atc_0924 233f16fcf2b803b9e16d7eea09c94db8 226 SUPERFAMILY SSF56784 14 213 2.33E-20 T 13-10-2018 IPR036412 HAD-like superfamily Atc_0924 233f16fcf2b803b9e16d7eea09c94db8 226 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 21 202 3.3E-21 T 13-10-2018 Atc_0924 233f16fcf2b803b9e16d7eea09c94db8 226 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 21 213 6.9E-34 T 13-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Atc_0924 233f16fcf2b803b9e16d7eea09c94db8 226 Pfam PF12710 haloacid dehalogenase-like hydrolase 21 200 4.1E-31 T 13-10-2018 Atc_1453 a2099dba0b9113716bbbecc16dc6a42c 279 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 56 2.9E-21 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain Atc_1453 a2099dba0b9113716bbbecc16dc6a42c 279 Gene3D G3DSA:3.30.1330.60 102 263 2.2E-44 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_1453 a2099dba0b9113716bbbecc16dc6a42c 279 Pfam PF00691 OmpA family 152 250 5.4E-19 T 13-10-2018 IPR006665 OmpA-like domain Atc_1453 a2099dba0b9113716bbbecc16dc6a42c 279 SUPERFAMILY SSF103088 142 256 1.23E-30 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_0207 c655e6190c5a2d0b48ce6ed878664aa6 343 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 336 1.8E-136 T 13-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Atc_0207 c655e6190c5a2d0b48ce6ed878664aa6 343 Gene3D G3DSA:3.90.25.10 186 334 2.4E-146 T 13-10-2018 Atc_0207 c655e6190c5a2d0b48ce6ed878664aa6 343 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 329 6.1E-130 T 13-10-2018 IPR016040 NAD(P)-binding domain Atc_0207 c655e6190c5a2d0b48ce6ed878664aa6 343 SUPERFAMILY SSF51735 3 334 3.64E-65 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0207 c655e6190c5a2d0b48ce6ed878664aa6 343 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 339 51.26 T 13-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Atc_0207 c655e6190c5a2d0b48ce6ed878664aa6 343 Gene3D G3DSA:3.40.50.720 5 320 2.4E-146 T 13-10-2018 Atc_3p10 c343e083e835716966524a9bcae5e330 77 ProDom PD028561 MEMBRANE IMMUNITY SUPERINFECTION GP66 PROTEIN IMM GP75 IMM RB69 INTEGRAL 17 64 1.0E-5 T 13-10-2018 IPR016410 Bacteriophage-associated immunity protein Atc_3p10 c343e083e835716966524a9bcae5e330 77 Pfam PF14373 Superinfection immunity protein 26 65 3.2E-15 T 13-10-2018 IPR016410 Bacteriophage-associated immunity protein Atc_2p c343e083e835716966524a9bcae5e330 77 ProDom PD028561 MEMBRANE IMMUNITY SUPERINFECTION GP66 PROTEIN IMM GP75 IMM RB69 INTEGRAL 17 64 1.0E-5 T 13-10-2018 IPR016410 Bacteriophage-associated immunity protein Atc_2p c343e083e835716966524a9bcae5e330 77 Pfam PF14373 Superinfection immunity protein 26 65 3.2E-15 T 13-10-2018 IPR016410 Bacteriophage-associated immunity protein Atc_0548 9ac0d5044597a977384ae7487bbde235 112 Pfam PF02635 DsrE/DsrF-like family 6 112 2.0E-15 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_0548 9ac0d5044597a977384ae7487bbde235 112 SUPERFAMILY SSF75169 1 112 2.49E-15 T 13-10-2018 IPR027396 DsrEFH-like Atc_0548 9ac0d5044597a977384ae7487bbde235 112 Gene3D G3DSA:3.40.1260.10 2 112 2.6E-17 T 13-10-2018 IPR027396 DsrEFH-like Atc_1905 9ac0d5044597a977384ae7487bbde235 112 Pfam PF02635 DsrE/DsrF-like family 6 112 2.0E-15 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_1905 9ac0d5044597a977384ae7487bbde235 112 SUPERFAMILY SSF75169 1 112 2.49E-15 T 13-10-2018 IPR027396 DsrEFH-like Atc_1905 9ac0d5044597a977384ae7487bbde235 112 Gene3D G3DSA:3.40.1260.10 2 112 2.6E-17 T 13-10-2018 IPR027396 DsrEFH-like Atc_3p21 1f55c7e0481628f55dbf6549d18e83df 188 Pfam PF00239 Resolvase, N terminal domain 4 137 4.7E-46 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atc_3p21 1f55c7e0481628f55dbf6549d18e83df 188 SUPERFAMILY SSF46689 139 182 8.42E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_3p21 1f55c7e0481628f55dbf6549d18e83df 188 SUPERFAMILY SSF53041 3 136 1.44E-45 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Atc_3p21 1f55c7e0481628f55dbf6549d18e83df 188 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Atc_3p21 1f55c7e0481628f55dbf6549d18e83df 188 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Atc_3p21 1f55c7e0481628f55dbf6549d18e83df 188 Gene3D G3DSA:3.40.50.1390 2 126 2.4E-49 T 13-10-2018 Atc_3p21 1f55c7e0481628f55dbf6549d18e83df 188 SMART SM00857 3 137 4.9E-62 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atc_2598 3b172c058498d0d26bfe5163707e3451 232 Gene3D G3DSA:2.60.120.10 40 155 6.6E-28 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_2598 3b172c058498d0d26bfe5163707e3451 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 196 211 2.0E-6 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_2598 3b172c058498d0d26bfe5163707e3451 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 180 196 2.0E-6 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_2598 3b172c058498d0d26bfe5163707e3451 232 SUPERFAMILY SSF51206 15 154 3.4E-25 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Atc_2598 3b172c058498d0d26bfe5163707e3451 232 SMART SM00419 174 222 1.7E-9 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_2598 3b172c058498d0d26bfe5163707e3451 232 SUPERFAMILY SSF46785 157 227 6.2E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_2598 3b172c058498d0d26bfe5163707e3451 232 Gene3D G3DSA:1.10.10.10 156 231 1.4E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2598 3b172c058498d0d26bfe5163707e3451 232 Pfam PF13545 Crp-like helix-turn-helix domain 159 227 3.2E-18 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atc_2598 3b172c058498d0d26bfe5163707e3451 232 SMART SM00100 22 142 4.9E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Atc_2598 3b172c058498d0d26bfe5163707e3451 232 Pfam PF00027 Cyclic nucleotide-binding domain 42 121 1.1E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Atc_0601 c70ddc427928c67fc925880f241f0747 156 SUPERFAMILY SSF47973 2 149 1.96E-62 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Atc_0601 c70ddc427928c67fc925880f241f0747 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.352 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Atc_0601 c70ddc427928c67fc925880f241f0747 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.3E-66 T 13-10-2018 IPR023798 Ribosomal protein S7 domain Atc_0601 c70ddc427928c67fc925880f241f0747 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.3E-68 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Atc_0601 c70ddc427928c67fc925880f241f0747 156 PIRSF PIRSF002122 3 156 1.1E-62 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Atc_0601 c70ddc427928c67fc925880f241f0747 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0601 c70ddc427928c67fc925880f241f0747 156 Gene3D G3DSA:1.10.455.10 2 156 1.9E-64 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Atc_0672 eea5d68dcdf64575586f66c713c5fe9e 363 Pfam PF00296 Luciferase-like monooxygenase 19 325 5.5E-58 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atc_0672 eea5d68dcdf64575586f66c713c5fe9e 363 SUPERFAMILY SSF51679 1 356 3.14E-80 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atc_0672 eea5d68dcdf64575586f66c713c5fe9e 363 Gene3D G3DSA:3.20.20.30 1 359 2.0E-93 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atc_1493 91156b412d34af09824e619ce96a49a3 223 Pfam PF00813 FliP family 26 217 4.0E-77 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 198 210 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 150 165 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 93 107 2.2E-24 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 81 93 2.2E-24 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 133 2.2E-24 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 211 221 2.2E-24 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 21 30 2.2E-24 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 2.2E-24 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 81 2.6E-63 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 192 2.6E-63 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 23 42 2.6E-63 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 220 2.6E-63 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 62 2.6E-63 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 150 170 2.6E-63 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atc_1493 91156b412d34af09824e619ce96a49a3 223 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 25 221 7.9E-84 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atc_2445 91cd0ef0a413364dd5f15e6e82f53337 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 4.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2445 91cd0ef0a413364dd5f15e6e82f53337 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 4.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2445 91cd0ef0a413364dd5f15e6e82f53337 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 4.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2445 91cd0ef0a413364dd5f15e6e82f53337 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2445 91cd0ef0a413364dd5f15e6e82f53337 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 4.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2445 91cd0ef0a413364dd5f15e6e82f53337 257 Gene3D G3DSA:1.10.8.400 204 257 2.6E-21 T 13-10-2018 Atc_2445 91cd0ef0a413364dd5f15e6e82f53337 257 Gene3D G3DSA:3.40.50.720 7 203 2.8E-33 T 13-10-2018 Atc_2445 91cd0ef0a413364dd5f15e6e82f53337 257 SUPERFAMILY SSF51735 5 255 2.54E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2445 91cd0ef0a413364dd5f15e6e82f53337 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 6.8E-81 T 13-10-2018 Atc_2445 91cd0ef0a413364dd5f15e6e82f53337 257 PIRSF PIRSF000094 1 257 9.1E-106 T 13-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atc_0025 4160ff08ac682981919112a3894aa64a 280 Gene3D G3DSA:1.10.10.2830 102 215 3.2E-36 T 13-10-2018 Atc_0025 4160ff08ac682981919112a3894aa64a 280 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 24 189 2.4E-59 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Atc_0025 4160ff08ac682981919112a3894aa64a 280 Pfam PF02195 ParB-like nuclease domain 26 115 3.0E-29 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_0025 4160ff08ac682981919112a3894aa64a 280 SMART SM00470 25 115 1.1E-38 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_0025 4160ff08ac682981919112a3894aa64a 280 SUPERFAMILY SSF110849 24 155 1.05E-32 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atc_0025 4160ff08ac682981919112a3894aa64a 280 Gene3D G3DSA:3.90.1530.30 38 101 1.0E-27 T 13-10-2018 Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 SMART SM00388 264 332 9.8E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 267 330 1.1E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 2.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 466 2.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 442 2.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 Gene3D G3DSA:1.10.287.130 269 333 5.7E-11 T 13-10-2018 Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 Gene3D G3DSA:3.30.565.10 336 488 5.8E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 Gene3D G3DSA:1.20.1480.50 174 267 5.5E-8 T 13-10-2018 Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 SUPERFAMILY SSF55874 322 488 7.2E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 SMART SM00304 212 263 0.0017 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 486 2.7E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 SMART SM00387 377 488 1.1E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0396 6d2d25664c89f02195a72f5eb5092e3f 494 SUPERFAMILY SSF47384 247 331 3.73E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_0613 e51bcb027fd561b52d63fbcf577b5c13 65 SUPERFAMILY SSF46561 1 61 2.35E-19 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0613 e51bcb027fd561b52d63fbcf577b5c13 65 Pfam PF00831 Ribosomal L29 protein 4 58 2.5E-21 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0613 e51bcb027fd561b52d63fbcf577b5c13 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.907 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0613 e51bcb027fd561b52d63fbcf577b5c13 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 58 7.3E-19 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0613 e51bcb027fd561b52d63fbcf577b5c13 65 Gene3D G3DSA:1.10.287.310 1 62 1.0E-23 T 13-10-2018 Atc_0613 e51bcb027fd561b52d63fbcf577b5c13 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 13-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_2709 24bc923f899f4e6f55b66baa6a9e7082 310 Hamap MF_00301 Homoserine kinase [thrB]. 1 310 130.174 T 13-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Atc_2709 24bc923f899f4e6f55b66baa6a9e7082 310 Gene3D G3DSA:3.90.1200.10 109 309 4.1E-62 T 13-10-2018 Atc_2709 24bc923f899f4e6f55b66baa6a9e7082 310 SUPERFAMILY SSF56112 5 309 3.88E-70 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Atc_2709 24bc923f899f4e6f55b66baa6a9e7082 310 Gene3D G3DSA:3.30.200.20 1 103 1.8E-32 T 13-10-2018 Atc_2709 24bc923f899f4e6f55b66baa6a9e7082 310 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 304 9.7E-98 T 13-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Atc_2709 24bc923f899f4e6f55b66baa6a9e7082 310 Pfam PF01636 Phosphotransferase enzyme family 28 254 1.8E-34 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase Atc_2651 81f5ae19a57e6576512d5a729a91d77f 324 Gene3D G3DSA:1.10.150.170 121 224 1.0E-93 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Atc_2651 81f5ae19a57e6576512d5a729a91d77f 324 Gene3D G3DSA:3.40.50.150 11 314 1.0E-93 T 13-10-2018 Atc_2651 81f5ae19a57e6576512d5a729a91d77f 324 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 11 317 35.813 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Atc_2651 81f5ae19a57e6576512d5a729a91d77f 324 SUPERFAMILY SSF53335 11 316 4.35E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2651 81f5ae19a57e6576512d5a729a91d77f 324 PIRSF PIRSF004486 5 318 1.8E-96 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Atc_2651 81f5ae19a57e6576512d5a729a91d77f 324 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 9 316 3.6E-93 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Atc_2651 81f5ae19a57e6576512d5a729a91d77f 324 Pfam PF01795 MraW methylase family 9 317 7.3E-95 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Atc_2651 81f5ae19a57e6576512d5a729a91d77f 324 SUPERFAMILY SSF81799 123 223 8.37E-34 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 Pfam PF00224 Pyruvate kinase, barrel domain 7 357 8.8E-105 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 SUPERFAMILY SSF51621 7 359 7.33E-90 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 Pfam PF02887 Pyruvate kinase, alpha/beta domain 380 487 1.6E-13 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 Gene3D G3DSA:3.20.20.60 7 355 1.4E-143 T 13-10-2018 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 Gene3D G3DSA:2.40.33.10 74 189 1.4E-143 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 SUPERFAMILY SSF52935 344 487 2.75E-21 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 PRINTS PR01050 Pyruvate kinase family signature 237 263 1.3E-61 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.3E-61 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 PRINTS PR01050 Pyruvate kinase family signature 264 288 1.3E-61 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 PRINTS PR01050 Pyruvate kinase family signature 289 313 1.3E-61 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 PRINTS PR01050 Pyruvate kinase family signature 314 332 1.3E-61 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 PRINTS PR01050 Pyruvate kinase family signature 207 221 1.3E-61 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 PRINTS PR01050 Pyruvate kinase family signature 333 349 1.3E-61 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 SUPERFAMILY SSF50800 74 186 7.15E-15 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 Gene3D G3DSA:3.40.1380.20 356 484 1.4E-143 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_1530 e799adb07ecb5f33fe9f76322e819961 505 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 7 486 1.4E-134 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 SUPERFAMILY SSF82693 137 323 1.05E-18 T 13-10-2018 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 Pfam PF00873 AcrB/AcrD/AcrF family 3 1005 1.3E-297 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 Gene3D G3DSA:3.30.70.1320 135 326 1.6E-294 T 13-10-2018 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 SUPERFAMILY SSF82866 785 1010 6.41E-47 T 13-10-2018 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 SUPERFAMILY SSF82714 183 266 3.27E-14 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 SUPERFAMILY SSF82866 290 489 1.44E-45 T 13-10-2018 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 SUPERFAMILY SSF82693 40 125 1.71E-23 T 13-10-2018 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 Gene3D G3DSA:3.30.2090.10 179 269 1.6E-294 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 Gene3D G3DSA:3.30.2090.10 701 788 1.6E-294 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 SUPERFAMILY SSF82714 702 787 1.23E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 Gene3D G3DSA:3.30.70.1430 40 796 1.6E-294 T 13-10-2018 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 SUPERFAMILY SSF82693 551 651 2.3E-14 T 13-10-2018 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 Gene3D G3DSA:1.20.1640.10 499 1002 1.6E-294 T 13-10-2018 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 Gene3D G3DSA:3.30.70.1430 553 648 1.6E-294 T 13-10-2018 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 Gene3D G3DSA:3.30.70.1440 649 845 1.6E-294 T 13-10-2018 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 PRINTS PR00702 Acriflavin resistance protein family signature 538 555 6.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 6.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0063 8530ef3f53493b6649251e876ae2ff3c 1023 Gene3D G3DSA:1.20.1640.10 10 498 1.6E-294 T 13-10-2018 Atc_2877 163aeb664b3adf49fe0754b28434cd84 110 Gene3D G3DSA:1.10.150.280 30 105 1.6E-14 T 13-10-2018 Atc_2877 163aeb664b3adf49fe0754b28434cd84 110 Pfam PF12836 Helix-hairpin-helix motif 48 102 2.7E-13 T 13-10-2018 Atc_2877 163aeb664b3adf49fe0754b28434cd84 110 SUPERFAMILY SSF47781 41 108 1.89E-17 T 13-10-2018 IPR010994 RuvA domain 2-like Atc_0582 c515762d29367696801d3f558c09933d 195 SUPERFAMILY SSF63380 9 70 1.79E-17 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atc_0582 c515762d29367696801d3f558c09933d 195 Gene3D G3DSA:2.40.30.20 1 66 2.5E-17 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0582 c515762d29367696801d3f558c09933d 195 PIRSF PIRSF000498 2 188 6.0E-66 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_0582 c515762d29367696801d3f558c09933d 195 Gene3D G3DSA:2.40.30.20 79 179 1.2E-34 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0582 c515762d29367696801d3f558c09933d 195 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 10 175 5.8E-55 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_0582 c515762d29367696801d3f558c09933d 195 SUPERFAMILY SSF63380 70 172 1.53E-32 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atc_0582 c515762d29367696801d3f558c09933d 195 Pfam PF00677 Lumazine binding domain 13 64 5.4E-15 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_0582 c515762d29367696801d3f558c09933d 195 Pfam PF00677 Lumazine binding domain 78 161 2.3E-25 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atc_2611 eb97477a8128d60e8615f35b32bb2e69 184 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 82 176 1.2E-16 T 13-10-2018 IPR018550 Lipid A 3-O-deacylase-related Atc_2611 eb97477a8128d60e8615f35b32bb2e69 184 Gene3D G3DSA:2.40.160.20 100 178 7.3E-11 T 13-10-2018 Atc_0307 1c174b669d847c92d5114e6747f04965 316 Gene3D G3DSA:1.10.10.10 232 307 3.8E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0307 1c174b669d847c92d5114e6747f04965 316 SUPERFAMILY SSF88946 43 151 3.4E-46 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atc_0307 1c174b669d847c92d5114e6747f04965 316 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 38 315 4.1E-119 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_0307 1c174b669d847c92d5114e6747f04965 316 Gene3D G3DSA:1.10.601.10 6 150 3.4E-46 T 13-10-2018 Atc_0307 1c174b669d847c92d5114e6747f04965 316 SUPERFAMILY SSF88659 154 227 7.41E-12 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_0307 1c174b669d847c92d5114e6747f04965 316 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 5 315 36.4 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_0307 1c174b669d847c92d5114e6747f04965 316 Pfam PF04545 Sigma-70, region 4 249 301 8.8E-17 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Atc_0307 1c174b669d847c92d5114e6747f04965 316 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 274 300 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0307 1c174b669d847c92d5114e6747f04965 316 SUPERFAMILY SSF88659 216 309 4.8E-23 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_0307 1c174b669d847c92d5114e6747f04965 316 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 77 303 1.1E-34 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atc_0307 1c174b669d847c92d5114e6747f04965 316 Pfam PF04539 Sigma-70 region 3 162 236 8.4E-16 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Atc_0307 1c174b669d847c92d5114e6747f04965 316 Pfam PF04542 Sigma-70 region 2 81 150 5.9E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atc_0307 1c174b669d847c92d5114e6747f04965 316 Gene3D G3DSA:1.10.10.10 154 229 9.8E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0307 1c174b669d847c92d5114e6747f04965 316 Pfam PF00140 Sigma-70 factor, region 1.2 43 74 7.2E-13 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_0307 1c174b669d847c92d5114e6747f04965 316 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 105 118 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0307 1c174b669d847c92d5114e6747f04965 316 PRINTS PR00046 Major sigma-70 factor signature 253 265 1.2E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0307 1c174b669d847c92d5114e6747f04965 316 PRINTS PR00046 Major sigma-70 factor signature 289 300 1.2E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0307 1c174b669d847c92d5114e6747f04965 316 PRINTS PR00046 Major sigma-70 factor signature 274 289 1.2E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0307 1c174b669d847c92d5114e6747f04965 316 PRINTS PR00046 Major sigma-70 factor signature 105 118 1.2E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_0307 1c174b669d847c92d5114e6747f04965 316 PRINTS PR00046 Major sigma-70 factor signature 129 137 1.2E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 Pfam PF01568 Molydopterin dinucleotide binding domain 605 715 1.4E-25 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 Pfam PF00384 Molybdopterin oxidoreductase 66 491 6.8E-82 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 Gene3D G3DSA:3.40.50.740 71 561 6.6E-183 T 13-10-2018 Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 SUPERFAMILY SSF53706 9 590 2.88E-189 T 13-10-2018 Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 SMART SM00926 7 61 2.1E-17 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 Gene3D G3DSA:1.10.10.1100 865 918 5.5E-11 T 13-10-2018 Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 SUPERFAMILY SSF50692 578 722 2.19E-40 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 10 60 1.4E-18 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 Gene3D G3DSA:2.20.25.90 4 62 5.1E-17 T 13-10-2018 Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 12 30 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 Pfam PF04324 BFD-like [2Fe-2S] binding domain 866 913 3.0E-12 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 Gene3D G3DSA:3.40.228.10 143 344 6.6E-183 T 13-10-2018 Atc_1124 15375eafa90ac97e3158ddfe0bd7a8d5 920 Gene3D G3DSA:2.40.40.20 595 722 1.1E-38 T 13-10-2018 Atc_2497 cbf7c65c8eb721a000bb4e610f5cac11 401 Gene3D G3DSA:3.40.50.10300 186 399 3.2E-53 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Atc_2497 cbf7c65c8eb721a000bb4e610f5cac11 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 189 371 2.9E-51 T 13-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Atc_2497 cbf7c65c8eb721a000bb4e610f5cac11 401 SUPERFAMILY SSF102645 187 396 1.44E-55 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Atc_2497 cbf7c65c8eb721a000bb4e610f5cac11 401 Pfam PF02441 Flavoprotein 10 181 2.5E-38 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Atc_2497 cbf7c65c8eb721a000bb4e610f5cac11 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 7 395 5.4E-110 T 13-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Atc_2497 cbf7c65c8eb721a000bb4e610f5cac11 401 SUPERFAMILY SSF52507 4 180 1.57E-52 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Atc_2497 cbf7c65c8eb721a000bb4e610f5cac11 401 Gene3D G3DSA:3.40.50.1950 3 184 2.7E-51 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Atc_0732 1d026bfcfa688b08a8e8dcd6e72a7458 105 SMART SM01219 1 104 1.3E-23 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Atc_0732 1d026bfcfa688b08a8e8dcd6e72a7458 105 Gene3D G3DSA:3.30.920.10 1 104 1.1E-23 T 13-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Atc_0732 1d026bfcfa688b08a8e8dcd6e72a7458 105 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 3 102 1.0E-22 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Atc_0732 1d026bfcfa688b08a8e8dcd6e72a7458 105 SUPERFAMILY SSF55387 1 99 4.71E-22 T 13-10-2018 Atc_0732 1d026bfcfa688b08a8e8dcd6e72a7458 105 Pfam PF01491 Frataxin-like domain 1 99 1.8E-19 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Atc_1307 7b000147541f085cdb5c37f088ae55c4 447 SUPERFAMILY SSF53383 9 441 2.28E-117 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_1307 7b000147541f085cdb5c37f088ae55c4 447 Gene3D G3DSA:3.90.1150.10 10 441 1.4E-141 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_1307 7b000147541f085cdb5c37f088ae55c4 447 Gene3D G3DSA:3.40.640.10 64 340 1.4E-141 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_1307 7b000147541f085cdb5c37f088ae55c4 447 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_1307 7b000147541f085cdb5c37f088ae55c4 447 PIRSF PIRSF000521 32 444 7.3E-21 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_1307 7b000147541f085cdb5c37f088ae55c4 447 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 441 1.5E-142 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Atc_1307 7b000147541f085cdb5c37f088ae55c4 447 Pfam PF00202 Aminotransferase class-III 29 440 3.0E-99 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_2260 48ecc04fd57bd52837e01e1fb4df750c 85 SUPERFAMILY SSF143120 1 76 1.57E-23 T 13-10-2018 IPR036165 YefM-like superfamily Atc_2260 48ecc04fd57bd52837e01e1fb4df750c 85 Gene3D G3DSA:3.40.1620.10 1 40 1.8E-19 T 13-10-2018 Atc_2260 48ecc04fd57bd52837e01e1fb4df750c 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 3.7E-20 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Atc_2260 48ecc04fd57bd52837e01e1fb4df750c 85 Gene3D G3DSA:1.10.1220.170 41 84 7.8E-16 T 13-10-2018 Atc_2260 48ecc04fd57bd52837e01e1fb4df750c 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 55 7.2E-10 T 13-10-2018 Atc_1734 db7eefcebfaf91200f94fbd38f8ae862 323 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 26 307 8.6E-77 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Atc_1734 db7eefcebfaf91200f94fbd38f8ae862 323 SUPERFAMILY SSF52374 24 177 1.81E-31 T 13-10-2018 Atc_1734 db7eefcebfaf91200f94fbd38f8ae862 323 Pfam PF01687 Riboflavin kinase 186 307 4.3E-32 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Atc_1734 db7eefcebfaf91200f94fbd38f8ae862 323 Pfam PF06574 FAD synthetase 21 168 3.0E-45 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Atc_1734 db7eefcebfaf91200f94fbd38f8ae862 323 Gene3D G3DSA:3.40.50.620 12 187 1.8E-54 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_1734 db7eefcebfaf91200f94fbd38f8ae862 323 SUPERFAMILY SSF82114 176 308 2.01E-39 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Atc_1734 db7eefcebfaf91200f94fbd38f8ae862 323 Gene3D G3DSA:2.40.30.30 188 314 4.9E-34 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Atc_1734 db7eefcebfaf91200f94fbd38f8ae862 323 PIRSF PIRSF004491 10 313 9.2E-94 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Atc_1734 db7eefcebfaf91200f94fbd38f8ae862 323 SMART SM00904 185 308 1.3E-45 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 Pfam PF00871 Acetokinase family 8 383 1.3E-105 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 SUPERFAMILY SSF53067 160 388 6.15E-70 T 13-10-2018 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 200 217 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 TIGRFAM TIGR00016 ackA: acetate kinase 7 386 1.2E-110 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 Gene3D G3DSA:3.30.420.40 196 392 4.7E-69 T 13-10-2018 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 Gene3D G3DSA:3.30.420.40 7 195 8.1E-58 T 13-10-2018 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 SUPERFAMILY SSF53067 7 192 4.4E-53 T 13-10-2018 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 PRINTS PR00471 Acetate kinase family signature 296 309 2.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 PRINTS PR00471 Acetate kinase family signature 175 188 2.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 PRINTS PR00471 Acetate kinase family signature 200 221 2.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 PRINTS PR00471 Acetate kinase family signature 8 19 2.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 PRINTS PR00471 Acetate kinase family signature 318 334 2.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 PRINTS PR00471 Acetate kinase family signature 370 382 2.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 PIRSF PIRSF000722 5 391 4.6E-125 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_1324 3280426a7e579634a9bccd3f80d8bc88 392 Hamap MF_00020 Acetate kinase [ackA]. 1 392 144.807 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Atc_2080 16576ec1b8548c08ccc00b9ed45a6c68 516 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 159 171 9.6E-15 T 13-10-2018 Atc_2080 16576ec1b8548c08ccc00b9ed45a6c68 516 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 76 90 9.6E-15 T 13-10-2018 Atc_2080 16576ec1b8548c08ccc00b9ed45a6c68 516 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 49 65 9.6E-15 T 13-10-2018 Atc_2080 16576ec1b8548c08ccc00b9ed45a6c68 516 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 190 214 9.6E-15 T 13-10-2018 Atc_2080 16576ec1b8548c08ccc00b9ed45a6c68 516 Pfam PF07669 Eco57I restriction-modification methylase 160 255 2.7E-10 T 13-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 Atc_2080 16576ec1b8548c08ccc00b9ed45a6c68 516 SUPERFAMILY SSF53335 39 280 2.6E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2080 16576ec1b8548c08ccc00b9ed45a6c68 516 Gene3D G3DSA:3.40.50.150 52 279 3.5E-30 T 13-10-2018 Atc_2080 16576ec1b8548c08ccc00b9ed45a6c68 516 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 162 168 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 SMART SM00388 259 330 1.7E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 Gene3D G3DSA:3.30.565.10 331 480 9.3E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 5.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 475 5.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 438 5.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 5.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 326 9.5E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 476 6.7E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 Gene3D G3DSA:1.10.287.130 241 327 5.9E-12 T 13-10-2018 Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 SUPERFAMILY SSF47384 248 326 3.53E-9 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 SMART SM00387 371 478 1.9E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_2363 52987208e2ba2a42fcd65faada3358e5 483 SUPERFAMILY SSF55874 321 475 3.41E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_1864 ba43467e8bf30f01ce856ccc1c76a845 471 SUPERFAMILY SSF55931 104 470 2.35E-138 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atc_1864 ba43467e8bf30f01ce856ccc1c76a845 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 1.6E-203 T 13-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_1864 ba43467e8bf30f01ce856ccc1c76a845 471 SMART SM01230 104 381 1.0E-151 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_1864 ba43467e8bf30f01ce856ccc1c76a845 471 SUPERFAMILY SSF54368 4 102 4.19E-35 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_1864 ba43467e8bf30f01ce856ccc1c76a845 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atc_1864 ba43467e8bf30f01ce856ccc1c76a845 471 Gene3D G3DSA:3.10.20.70 4 106 4.1E-38 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_1864 ba43467e8bf30f01ce856ccc1c76a845 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atc_1864 ba43467e8bf30f01ce856ccc1c76a845 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 2.8E-30 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atc_1864 ba43467e8bf30f01ce856ccc1c76a845 471 Pfam PF00120 Glutamine synthetase, catalytic domain 104 468 1.0E-138 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_1864 ba43467e8bf30f01ce856ccc1c76a845 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 13-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atc_1864 ba43467e8bf30f01ce856ccc1c76a845 471 Gene3D G3DSA:3.30.590.10 107 459 3.1E-147 T 13-10-2018 Atc_1607 2cd9c5b91a681f5ed64daa5af7c1e6d9 230 SUPERFAMILY SSF54862 1 202 6.49E-68 T 13-10-2018 Atc_1607 2cd9c5b91a681f5ed64daa5af7c1e6d9 230 Pfam PF13247 4Fe-4S dicluster domain 67 166 8.2E-24 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atc_1607 2cd9c5b91a681f5ed64daa5af7c1e6d9 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 105 116 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atc_1607 2cd9c5b91a681f5ed64daa5af7c1e6d9 230 Gene3D G3DSA:3.30.70.20 1 224 3.0E-67 T 13-10-2018 Atc_0347 f9cb87e33572397ef547ea254f0fc259 121 Pfam PF02416 mttA/Hcf106 family 5 49 2.8E-8 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Atc_0347 f9cb87e33572397ef547ea254f0fc259 121 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.1E-15 T 13-10-2018 Atc_0347 f9cb87e33572397ef547ea254f0fc259 121 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.1E-15 T 13-10-2018 Atc_0347 f9cb87e33572397ef547ea254f0fc259 121 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.1E-15 T 13-10-2018 Atc_0347 f9cb87e33572397ef547ea254f0fc259 121 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 70 1.5E-18 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Atc_0347 f9cb87e33572397ef547ea254f0fc259 121 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 121 14.888 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Atc_0281 000d242ab81fbda33a3e015219f81659 244 Pfam PF04250 Protein of unknown function (DUF429) 6 200 1.2E-5 T 13-10-2018 IPR007362 Protein of unknown function DUF429 Atc_1759 e0c5601c75b5115431adc3d1bed31f2e 91 Pfam PF04380 Membrane fusogenic activity 2 75 9.6E-22 T 13-10-2018 IPR007475 Membrane fusogenic activity Atc_0586 ce54dd76662fae03a940e1c7a59961cb 197 SMART SM00671 55 90 3.5E-5 T 13-10-2018 IPR006597 Sel1-like repeat Atc_0586 ce54dd76662fae03a940e1c7a59961cb 197 SMART SM00671 127 162 4.5E-11 T 13-10-2018 IPR006597 Sel1-like repeat Atc_0586 ce54dd76662fae03a940e1c7a59961cb 197 SMART SM00671 91 126 4.2E-9 T 13-10-2018 IPR006597 Sel1-like repeat Atc_0586 ce54dd76662fae03a940e1c7a59961cb 197 Pfam PF08238 Sel1 repeat 127 162 2.1E-9 T 13-10-2018 IPR006597 Sel1-like repeat Atc_0586 ce54dd76662fae03a940e1c7a59961cb 197 Pfam PF08238 Sel1 repeat 68 90 7.2E-6 T 13-10-2018 IPR006597 Sel1-like repeat Atc_0586 ce54dd76662fae03a940e1c7a59961cb 197 Pfam PF08238 Sel1 repeat 92 125 2.2E-9 T 13-10-2018 IPR006597 Sel1-like repeat Atc_0586 ce54dd76662fae03a940e1c7a59961cb 197 Gene3D G3DSA:1.25.40.10 41 179 1.4E-40 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0586 ce54dd76662fae03a940e1c7a59961cb 197 SUPERFAMILY SSF81901 60 170 9.68E-33 T 13-10-2018 Atc_2652 c820edd1f88bd1699eb765008374c4cd 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 15.105 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Atc_2652 c820edd1f88bd1699eb765008374c4cd 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 6 85 3.6E-20 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Atc_2652 c820edd1f88bd1699eb765008374c4cd 87 Pfam PF04999 Cell division protein FtsL 4 85 8.3E-17 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Atc_1173 1478d6552e6162fc3f60af0d3e507a7f 158 Pfam PF08805 PilS N terminal 32 154 1.3E-4 T 13-10-2018 IPR014911 Type 4 secretion system, PilS, N-terminal Atc_1173 1478d6552e6162fc3f60af0d3e507a7f 158 SUPERFAMILY SSF54523 30 153 6.12E-8 T 13-10-2018 Atc_1173 1478d6552e6162fc3f60af0d3e507a7f 158 Gene3D G3DSA:3.30.1690.10 29 154 5.3E-13 T 13-10-2018 Atc_2059 4c2b747bc1c5c9b03034fe609d5eb1f8 310 SUPERFAMILY SSF53955 86 158 1.69E-5 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_2059 4c2b747bc1c5c9b03034fe609d5eb1f8 310 Gene3D G3DSA:1.10.530.10 179 309 4.1E-37 T 13-10-2018 Atc_2059 4c2b747bc1c5c9b03034fe609d5eb1f8 310 Pfam PF01464 Transglycosylase SLT domain 191 281 9.1E-24 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_2059 4c2b747bc1c5c9b03034fe609d5eb1f8 310 SUPERFAMILY SSF53955 177 304 1.07E-40 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_2402 ee7d7266f4564da99fc2f5ab85feb63b 217 Pfam PF00578 AhpC/TSA family 15 144 8.5E-35 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atc_2402 ee7d7266f4564da99fc2f5ab85feb63b 217 PIRSF PIRSF000239 8 216 2.9E-77 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atc_2402 ee7d7266f4564da99fc2f5ab85feb63b 217 Gene3D G3DSA:3.30.1020.10 155 217 2.2E-25 T 13-10-2018 Atc_2402 ee7d7266f4564da99fc2f5ab85feb63b 217 Hamap MF_00401 Peroxiredoxin. 13 217 46.002 T 13-10-2018 IPR022915 Peroxiredoxin, TDXH subfamily GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atc_2402 ee7d7266f4564da99fc2f5ab85feb63b 217 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 165 204 1.5E-17 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atc_2402 ee7d7266f4564da99fc2f5ab85feb63b 217 SUPERFAMILY SSF52833 13 216 5.74E-71 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2402 ee7d7266f4564da99fc2f5ab85feb63b 217 Gene3D G3DSA:3.40.30.10 14 154 7.5E-47 T 13-10-2018 Atc_0516 de7c0b9b83970425cdc27624c46a0428 483 Gene3D G3DSA:3.90.550.10 54 315 2.4E-45 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0516 de7c0b9b83970425cdc27624c46a0428 483 Pfam PF00535 Glycosyl transferase family 2 63 200 2.6E-22 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atc_0516 de7c0b9b83970425cdc27624c46a0428 483 SUPERFAMILY SSF53448 60 375 3.12E-49 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0829 b1316cb03b4df56950b0ad5d698ee1e6 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.5E-23 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Atc_0829 b1316cb03b4df56950b0ad5d698ee1e6 107 SUPERFAMILY SSF89360 1 96 1.94E-31 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Atc_0829 b1316cb03b4df56950b0ad5d698ee1e6 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Atc_0829 b1316cb03b4df56950b0ad5d698ee1e6 107 Gene3D G3DSA:2.60.300.12 2 107 1.9E-37 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Atc_0829 b1316cb03b4df56950b0ad5d698ee1e6 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 106 1.1E-48 T 13-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 Atc_0829 b1316cb03b4df56950b0ad5d698ee1e6 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 1.7E-36 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Atc_1182 2e18627de67bf553b49edab47462cd45 133 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 126 4.9E-56 T 13-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system Atc_1182 2e18627de67bf553b49edab47462cd45 133 Gene3D G3DSA:3.30.160.250 1 85 5.2E-29 T 13-10-2018 Atc_1182 2e18627de67bf553b49edab47462cd45 133 SUPERFAMILY SSF143100 2 65 6.8E-22 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Atc_0592 9f728f33b9cc0f4300997c7c8e7154ee 116 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 60 110 2.9E-16 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atc_0592 9f728f33b9cc0f4300997c7c8e7154ee 116 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 58 111 1.0E-13 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Atc_0592 9f728f33b9cc0f4300997c7c8e7154ee 116 PRINTS PR01650 Bacterial translocase SecE signature 98 114 1.0E-11 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Atc_0592 9f728f33b9cc0f4300997c7c8e7154ee 116 PRINTS PR01650 Bacterial translocase SecE signature 78 98 1.0E-11 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Atc_0592 9f728f33b9cc0f4300997c7c8e7154ee 116 PRINTS PR01650 Bacterial translocase SecE signature 54 74 1.0E-11 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Atc_0592 9f728f33b9cc0f4300997c7c8e7154ee 116 PRINTS PR01650 Bacterial translocase SecE signature 33 54 1.0E-11 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Atc_0592 9f728f33b9cc0f4300997c7c8e7154ee 116 Gene3D G3DSA:1.20.5.1030 53 111 2.7E-15 T 13-10-2018 IPR038379 SecE superfamily Atc_0592 9f728f33b9cc0f4300997c7c8e7154ee 116 Hamap MF_00422 Protein translocase subunit SecE [secE]. 55 110 12.457 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atc_0592 9f728f33b9cc0f4300997c7c8e7154ee 116 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 60 88 - T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atc_2828 9c7eb91eb065ab81c47944633611dc1f 148 Pfam PF00011 Hsp20/alpha crystallin family 48 147 1.9E-23 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Atc_2828 9c7eb91eb065ab81c47944633611dc1f 148 SUPERFAMILY SSF49764 19 148 1.17E-35 T 13-10-2018 IPR008978 HSP20-like chaperone Atc_2828 9c7eb91eb065ab81c47944633611dc1f 148 Gene3D G3DSA:2.60.40.790 6 148 6.0E-35 T 13-10-2018 IPR008978 HSP20-like chaperone Atc_2509 f31cc7637f6b3dc14b9d6d474f349e25 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.5E-28 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_2509 f31cc7637f6b3dc14b9d6d474f349e25 78 SUPERFAMILY SSF143800 2 77 1.69E-32 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2509 f31cc7637f6b3dc14b9d6d474f349e25 78 Gene3D G3DSA:2.30.170.40 2 78 2.0E-35 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2509 f31cc7637f6b3dc14b9d6d474f349e25 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 21.653 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_2509 f31cc7637f6b3dc14b9d6d474f349e25 78 Pfam PF00830 Ribosomal L28 family 3 62 1.7E-29 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2557 2c65a28bf9cd9ca022c8cab281da67e9 335 SUPERFAMILY SSF55681 88 334 1.79E-80 T 13-10-2018 Atc_2557 2c65a28bf9cd9ca022c8cab281da67e9 335 Gene3D G3DSA:3.30.930.10 4 335 2.2E-121 T 13-10-2018 Atc_2557 2c65a28bf9cd9ca022c8cab281da67e9 335 SUPERFAMILY SSF46589 10 95 2.82E-20 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Atc_2557 2c65a28bf9cd9ca022c8cab281da67e9 335 Pfam PF01409 tRNA synthetases class II core domain (F) 88 334 3.6E-104 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Atc_2557 2c65a28bf9cd9ca022c8cab281da67e9 335 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 15 83 1.8E-21 T 13-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Atc_2557 2c65a28bf9cd9ca022c8cab281da67e9 335 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 4 334 48.898 T 13-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Atc_2557 2c65a28bf9cd9ca022c8cab281da67e9 335 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 35 334 1.2E-104 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Atc_0533 4c65b36c9704de8874e96e1383ed78a9 330 Gene3D G3DSA:3.40.50.300 119 323 1.2E-73 T 13-10-2018 Atc_0533 4c65b36c9704de8874e96e1383ed78a9 330 Pfam PF02562 PhoH-like protein 120 323 3.1E-93 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 Atc_0533 4c65b36c9704de8874e96e1383ed78a9 330 SUPERFAMILY SSF52540 127 300 6.33E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0837 c2ec888ca0e2de73966fb84c152cb15c 255 SMART SM00382 33 227 3.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0837 c2ec888ca0e2de73966fb84c152cb15c 255 SUPERFAMILY SSF52540 9 242 7.45E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0837 c2ec888ca0e2de73966fb84c152cb15c 255 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0837 c2ec888ca0e2de73966fb84c152cb15c 255 Pfam PF00005 ABC transporter 24 180 6.7E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0837 c2ec888ca0e2de73966fb84c152cb15c 255 Gene3D G3DSA:3.40.50.300 7 253 3.0E-67 T 13-10-2018 Atc_0837 c2ec888ca0e2de73966fb84c152cb15c 255 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 9 255 2.7E-119 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Atc_2p08 ab4e4d27768947dc71173acad6f96089 423 Gene3D G3DSA:2.40.160.10 25 228 1.1E-12 T 13-10-2018 IPR023614 Porin domain superfamily Atc_2p08 ab4e4d27768947dc71173acad6f96089 423 Pfam PF07396 Phosphate-selective porin O and P 331 382 4.4E-6 T 13-10-2018 IPR010870 Phosphate-selective porin O/P Atc_2p08 ab4e4d27768947dc71173acad6f96089 423 Pfam PF07396 Phosphate-selective porin O and P 42 186 4.5E-6 T 13-10-2018 IPR010870 Phosphate-selective porin O/P Atc_1209 e9daa3bdd47c8124cd65b49507b8d9c6 312 Pfam PF08346 AntA/AntB antirepressor 20 94 2.1E-26 T 13-10-2018 IPR013557 AntA/AntB antirepressor Atc_2490 4ee7b20534c2d5a944267d811f29cbcc 279 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 4 243 8.8E-90 T 13-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Atc_2490 4ee7b20534c2d5a944267d811f29cbcc 279 Pfam PF01048 Phosphorylase superfamily 4 243 9.5E-44 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Atc_2490 4ee7b20534c2d5a944267d811f29cbcc 279 SUPERFAMILY SSF53167 4 257 3.62E-81 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Atc_2490 4ee7b20534c2d5a944267d811f29cbcc 279 Gene3D G3DSA:3.40.50.1580 3 274 1.5E-82 T 13-10-2018 Atc_2490 4ee7b20534c2d5a944267d811f29cbcc 279 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 263 37.271 T 13-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Atc_m002 9ccfe13b12a2ac51516b9df157e51278 115 Gene3D G3DSA:3.30.420.270 43 110 2.6E-7 T 13-10-2018 Atc_m002 9ccfe13b12a2ac51516b9df157e51278 115 Pfam PF02472 Biopolymer transport protein ExbD/TolR 1 113 2.1E-23 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 SUPERFAMILY SSF81442 55 576 1.57E-143 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 343 358 9.6E-72 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 246 265 9.6E-72 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 318 9.6E-72 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 116 139 9.6E-72 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 479 500 9.6E-72 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 58 83 9.6E-72 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 402 420 9.6E-72 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 449 9.6E-72 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 235 9.6E-72 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 367 388 9.6E-72 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 167 9.6E-72 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 Gene3D G3DSA:1.20.210.10 41 584 4.1E-162 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 67 520 2.2E-116 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0185 d0f3058da4adfa00e8d7a9ad9bede7eb 715 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 299 353 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_1344 761f943ad423f5082d2ea34d91de1be4 405 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 132 357 2.1E-106 T 13-10-2018 IPR022488 Polyphosphate kinase-2-related Atc_1344 761f943ad423f5082d2ea34d91de1be4 405 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 131 357 7.5E-118 T 13-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 Atc_1344 761f943ad423f5082d2ea34d91de1be4 405 SUPERFAMILY SSF52540 163 351 1.67E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1344 761f943ad423f5082d2ea34d91de1be4 405 Gene3D G3DSA:3.40.50.300 99 377 5.0E-105 T 13-10-2018 Atc_0655 faae1b237623895b906c2dcb31e330f1 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 6 155 8.3E-58 T 13-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Atc_0655 faae1b237623895b906c2dcb31e330f1 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 6.5E-28 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Atc_0655 faae1b237623895b906c2dcb31e330f1 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 32.732 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Atc_0655 faae1b237623895b906c2dcb31e330f1 158 Gene3D G3DSA:1.10.287.180 2 76 4.8E-30 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Atc_0655 faae1b237623895b906c2dcb31e330f1 158 Gene3D G3DSA:3.10.50.30 80 158 1.1E-29 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Atc_0655 faae1b237623895b906c2dcb31e330f1 158 SUPERFAMILY SSF54534 84 157 9.42E-23 T 13-10-2018 Atc_0655 faae1b237623895b906c2dcb31e330f1 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 8.3E-31 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Atc_0655 faae1b237623895b906c2dcb31e330f1 158 PIRSF PIRSF006092 1 158 2.5E-53 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Atc_0655 faae1b237623895b906c2dcb31e330f1 158 SUPERFAMILY SSF46557 4 78 5.75E-28 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Atc_0655 faae1b237623895b906c2dcb31e330f1 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Atc_0655 faae1b237623895b906c2dcb31e330f1 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Atc_0189 86ed64a590862796bcbae90de20864f7 314 Gene3D G3DSA:1.10.357.140 32 198 3.9E-17 T 13-10-2018 Atc_0189 86ed64a590862796bcbae90de20864f7 314 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 78 100 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site Atc_0189 86ed64a590862796bcbae90de20864f7 314 Pfam PF01040 UbiA prenyltransferase family 39 279 2.2E-49 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Atc_0189 86ed64a590862796bcbae90de20864f7 314 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 26 304 1.2E-82 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Atc_0189 86ed64a590862796bcbae90de20864f7 314 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 23 307 17.733 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Atc_0400 177592ab3dc02ebb996a6aa832409715 90 SUPERFAMILY SSF55594 4 88 2.88E-25 T 13-10-2018 IPR035895 HPr-like superfamily Atc_0400 177592ab3dc02ebb996a6aa832409715 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Atc_0400 177592ab3dc02ebb996a6aa832409715 90 Gene3D G3DSA:3.30.1340.10 3 89 5.1E-27 T 13-10-2018 IPR035895 HPr-like superfamily Atc_0400 177592ab3dc02ebb996a6aa832409715 90 Pfam PF00381 PTS HPr component phosphorylation site 5 81 1.6E-22 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Atc_0400 177592ab3dc02ebb996a6aa832409715 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 7 81 1.8E-24 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Atc_0400 177592ab3dc02ebb996a6aa832409715 90 PRINTS PR00107 Phosphocarrier protein signature 54 71 4.9E-14 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Atc_0400 177592ab3dc02ebb996a6aa832409715 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 4.9E-14 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Atc_0400 177592ab3dc02ebb996a6aa832409715 90 PRINTS PR00107 Phosphocarrier protein signature 39 54 4.9E-14 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Atc_0400 177592ab3dc02ebb996a6aa832409715 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 40 55 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Atc_1368 eb3c99aa7c775064aae91e3fc32fedaa 357 SMART SM00530 14 75 8.6E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atc_1368 eb3c99aa7c775064aae91e3fc32fedaa 357 Gene3D G3DSA:1.10.260.40 12 93 1.3E-23 T 13-10-2018 Atc_1368 eb3c99aa7c775064aae91e3fc32fedaa 357 Pfam PF13413 Helix-turn-helix domain 15 75 3.3E-24 T 13-10-2018 Atc_1368 eb3c99aa7c775064aae91e3fc32fedaa 357 SUPERFAMILY SSF47413 14 81 2.52E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_1368 eb3c99aa7c775064aae91e3fc32fedaa 357 Pfam PF13464 Domain of unknown function (DUF4115) 202 274 1.5E-18 T 13-10-2018 IPR025194 Domain of unknown function DUF4115 Atc_0630 c0a9e06183f4de9ce073f0a510713137 159 SMART SM00363 49 113 2.1E-17 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0630 c0a9e06183f4de9ce073f0a510713137 159 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 2 48 3.1E-17 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Atc_0630 c0a9e06183f4de9ce073f0a510713137 159 SMART SM01390 2 48 5.6E-13 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Atc_0630 c0a9e06183f4de9ce073f0a510713137 159 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 2 159 4.4E-59 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Atc_0630 c0a9e06183f4de9ce073f0a510713137 159 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 159 26.13 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Atc_0630 c0a9e06183f4de9ce073f0a510713137 159 Pfam PF01479 S4 domain 50 96 3.0E-21 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0630 c0a9e06183f4de9ce073f0a510713137 159 Gene3D G3DSA:1.10.1050.10 2 159 3.7E-60 T 13-10-2018 Atc_0630 c0a9e06183f4de9ce073f0a510713137 159 Gene3D G3DSA:3.10.290.10 50 139 3.7E-60 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atc_0630 c0a9e06183f4de9ce073f0a510713137 159 SUPERFAMILY SSF55174 2 159 4.19E-54 T 13-10-2018 Atc_2186 752ff70998f07240c01811db55778407 476 Gene3D G3DSA:1.10.579.10 289 476 8.1E-84 T 13-10-2018 Atc_2186 752ff70998f07240c01811db55778407 476 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 320 332 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Atc_2186 752ff70998f07240c01811db55778407 476 Pfam PF00875 DNA photolyase 7 164 9.0E-43 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Atc_2186 752ff70998f07240c01811db55778407 476 Pfam PF03441 FAD binding domain of DNA photolyase 271 470 6.8E-88 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Atc_2186 752ff70998f07240c01811db55778407 476 SUPERFAMILY SSF48173 187 473 3.01E-116 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Atc_2186 752ff70998f07240c01811db55778407 476 PRINTS PR00147 DNA photolyase signature 136 152 4.1E-23 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Atc_2186 752ff70998f07240c01811db55778407 476 PRINTS PR00147 DNA photolyase signature 340 358 4.1E-23 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Atc_2186 752ff70998f07240c01811db55778407 476 PRINTS PR00147 DNA photolyase signature 379 393 4.1E-23 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Atc_2186 752ff70998f07240c01811db55778407 476 PRINTS PR00147 DNA photolyase signature 320 336 4.1E-23 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Atc_2186 752ff70998f07240c01811db55778407 476 Gene3D G3DSA:3.40.50.620 7 201 1.0E-86 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2186 752ff70998f07240c01811db55778407 476 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 340 359 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Atc_2186 752ff70998f07240c01811db55778407 476 SUPERFAMILY SSF52425 3 174 5.36E-47 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Atc_2186 752ff70998f07240c01811db55778407 476 Gene3D G3DSA:1.25.40.80 126 285 1.0E-86 T 13-10-2018 Atc_2353 f414045e002c25e265e705b8cb3b723c 156 Gene3D G3DSA:3.40.1260.10 1 156 6.1E-43 T 13-10-2018 IPR027396 DsrEFH-like Atc_2353 f414045e002c25e265e705b8cb3b723c 156 Pfam PF13686 DsrE/DsrF/DrsH-like family 3 155 1.5E-56 T 13-10-2018 IPR032836 DsrE2-like family Atc_2353 f414045e002c25e265e705b8cb3b723c 156 SUPERFAMILY SSF75169 4 155 1.71E-20 T 13-10-2018 IPR027396 DsrEFH-like Atc_1278 fd4a4853d006d9a76775fe4f27ad1d9d 715 Pfam PF11171 Protein of unknown function (DUF2958) 113 140 2.0E-4 T 13-10-2018 IPR021341 Protein of unknown function DUF2958 Atc_2227 a3e9e21ed998991cd0451e98c2ebbf6a 490 SUPERFAMILY SSF75304 2 483 8.24E-173 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atc_2227 a3e9e21ed998991cd0451e98c2ebbf6a 490 Gene3D G3DSA:3.90.1300.10 3 486 2.1E-208 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atc_2227 a3e9e21ed998991cd0451e98c2ebbf6a 490 PIRSF PIRSF001221 1 454 1.6E-43 T 13-10-2018 Atc_2227 a3e9e21ed998991cd0451e98c2ebbf6a 490 PIRSF PIRSF001221 445 475 8.2 T 13-10-2018 Atc_2227 a3e9e21ed998991cd0451e98c2ebbf6a 490 ProSitePatterns PS00571 Amidases signature. 151 182 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Atc_2227 a3e9e21ed998991cd0451e98c2ebbf6a 490 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 476 5.6E-185 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atc_2227 a3e9e21ed998991cd0451e98c2ebbf6a 490 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 94.954 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atc_2227 a3e9e21ed998991cd0451e98c2ebbf6a 490 Pfam PF01425 Amidase 24 466 1.0E-165 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atc_1707 e6747e392b377e2dd5563f900f9e765c 177 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 163 5.5E-40 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Atc_1707 e6747e392b377e2dd5563f900f9e765c 177 SUPERFAMILY SSF46785 81 155 9.98E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1707 e6747e392b377e2dd5563f900f9e765c 177 SUPERFAMILY SSF46785 9 76 1.59E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1707 e6747e392b377e2dd5563f900f9e765c 177 PIRSF PIRSF019345 5 172 1.8E-47 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Atc_1707 e6747e392b377e2dd5563f900f9e765c 177 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 12 165 1.3E-33 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Atc_1707 e6747e392b377e2dd5563f900f9e765c 177 Gene3D G3DSA:1.10.10.10 75 171 4.1E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1912 f57b002256d4898b48e4a622087147f8 146 Pfam PF05114 Protein of unknown function (DUF692) 2 144 3.1E-35 T 13-10-2018 IPR007801 Uncharacterised protein family UPF0276 Atc_1912 f57b002256d4898b48e4a622087147f8 146 Gene3D G3DSA:3.20.20.150 1 146 1.4E-32 T 13-10-2018 Atc_0541 f57b002256d4898b48e4a622087147f8 146 Pfam PF05114 Protein of unknown function (DUF692) 2 144 3.1E-35 T 13-10-2018 IPR007801 Uncharacterised protein family UPF0276 Atc_0541 f57b002256d4898b48e4a622087147f8 146 Gene3D G3DSA:3.20.20.150 1 146 1.4E-32 T 13-10-2018 Atc_0197 41d5894766e5274539eda22dac29c497 248 Pfam PF00753 Metallo-beta-lactamase superfamily 26 221 1.1E-15 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_0197 41d5894766e5274539eda22dac29c497 248 Gene3D G3DSA:3.60.15.10 4 241 1.8E-38 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_0197 41d5894766e5274539eda22dac29c497 248 SMART SM00849 27 221 2.6E-14 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_0197 41d5894766e5274539eda22dac29c497 248 SUPERFAMILY SSF56281 12 238 1.11E-28 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_m012 cee396feff0a3a3e612e410168666a9a 205 Pfam PF05598 Transposase domain (DUF772) 58 130 2.0E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1783 d90db980ff06bf8257d623b797a6556f 259 SMART SM00563 46 158 3.3E-35 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Atc_1783 d90db980ff06bf8257d623b797a6556f 259 SUPERFAMILY SSF69593 22 225 7.45E-31 T 13-10-2018 Atc_1783 d90db980ff06bf8257d623b797a6556f 259 Pfam PF01553 Acyltransferase 35 155 1.4E-22 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Atc_1783 d90db980ff06bf8257d623b797a6556f 259 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 38 155 1.1E-31 T 13-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 Atc_2281 4f1111f72e64f3cf8dfef74556e5673c 546 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 12 514 1.2E-166 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_2281 4f1111f72e64f3cf8dfef74556e5673c 546 PIRSF PIRSF006446 5 337 1.7E-109 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_2281 4f1111f72e64f3cf8dfef74556e5673c 546 PIRSF PIRSF006446 373 536 8.5E-37 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_0361 6d26d995d166bed17a45834c0010f195 479 SUPERFAMILY SSF54534 328 426 5.43E-23 T 13-10-2018 Atc_0361 6d26d995d166bed17a45834c0010f195 479 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 365 386 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Atc_0361 6d26d995d166bed17a45834c0010f195 479 Gene3D G3DSA:3.10.50.40 225 327 3.7E-59 T 13-10-2018 Atc_0361 6d26d995d166bed17a45834c0010f195 479 Hamap MF_01183 Chaperone SurA [surA]. 34 472 26.915 T 13-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 Atc_0361 6d26d995d166bed17a45834c0010f195 479 Pfam PF13616 PPIC-type PPIASE domain 325 426 1.7E-17 T 13-10-2018 Atc_0361 6d26d995d166bed17a45834c0010f195 479 SUPERFAMILY SSF109998 73 249 9.22E-42 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Atc_0361 6d26d995d166bed17a45834c0010f195 479 SUPERFAMILY SSF54534 223 321 4.97E-25 T 13-10-2018 Atc_0361 6d26d995d166bed17a45834c0010f195 479 Pfam PF09312 SurA N-terminal domain 73 190 2.9E-34 T 13-10-2018 IPR015391 SurA N-terminal Atc_0361 6d26d995d166bed17a45834c0010f195 479 Gene3D G3DSA:3.10.50.40 328 429 3.7E-59 T 13-10-2018 Atc_0361 6d26d995d166bed17a45834c0010f195 479 Pfam PF00639 PPIC-type PPIASE domain 226 318 3.6E-17 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Atc_0361 6d26d995d166bed17a45834c0010f195 479 Gene3D G3DSA:1.10.4030.30 70 224 3.5E-44 T 13-10-2018 Atc_1763 ad6acb56cfebeb7303a4944a59efea30 220 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 9 216 35.474 T 13-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Atc_1763 ad6acb56cfebeb7303a4944a59efea30 220 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 12 217 7.6E-58 T 13-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Atc_1763 ad6acb56cfebeb7303a4944a59efea30 220 Pfam PF02666 Phosphatidylserine decarboxylase 45 210 5.1E-28 T 13-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Atc_0644 d442f7a298809a5f9d96bf45d904f84d 217 SUPERFAMILY SSF50475 19 217 2.99E-63 T 13-10-2018 Atc_0644 d442f7a298809a5f9d96bf45d904f84d 217 PIRSF PIRSF000190 2 217 6.3E-74 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atc_0644 d442f7a298809a5f9d96bf45d904f84d 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 185 198 - T 13-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atc_0644 d442f7a298809a5f9d96bf45d904f84d 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 175 217 2.0E-19 T 13-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atc_0644 d442f7a298809a5f9d96bf45d904f84d 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 47 120 2.3E-23 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atc_0644 d442f7a298809a5f9d96bf45d904f84d 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 13 217 35.606 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atc_0644 d442f7a298809a5f9d96bf45d904f84d 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 5 217 5.3E-74 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atc_0644 d442f7a298809a5f9d96bf45d904f84d 217 Gene3D G3DSA:2.30.110.10 5 217 4.6E-78 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atc_2685 2c75022fa423ca35cb0352929b93f842 576 SUPERFAMILY SSF56601 167 551 8.63E-80 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_2685 2c75022fa423ca35cb0352929b93f842 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 53 199 1.3E-6 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Atc_2685 2c75022fa423ca35cb0352929b93f842 576 Gene3D G3DSA:3.30.450.330 219 538 3.9E-89 T 13-10-2018 Atc_2685 2c75022fa423ca35cb0352929b93f842 576 Gene3D G3DSA:3.90.1310.30 44 215 1.3E-32 T 13-10-2018 Atc_2685 2c75022fa423ca35cb0352929b93f842 576 Gene3D G3DSA:3.40.710.10 277 457 3.9E-89 T 13-10-2018 Atc_2685 2c75022fa423ca35cb0352929b93f842 576 SUPERFAMILY SSF56519 48 214 2.35E-30 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Atc_2685 2c75022fa423ca35cb0352929b93f842 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 240 537 1.3E-61 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atc_0218 50ddf4f14ea46000657b4c7f411922a9 408 Gene3D G3DSA:3.40.50.2000 198 384 8.3E-15 T 13-10-2018 Atc_0218 50ddf4f14ea46000657b4c7f411922a9 408 SUPERFAMILY SSF53756 130 382 5.76E-18 T 13-10-2018 Atc_1691 da232da6b466b97aadabfb395e33b032 232 Gene3D G3DSA:2.40.50.580 3 78 6.2E-28 T 13-10-2018 Atc_1691 da232da6b466b97aadabfb395e33b032 232 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 232 52.451 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein Atc_1691 da232da6b466b97aadabfb395e33b032 232 Gene3D G3DSA:3.40.1350.60 79 230 1.5E-49 T 13-10-2018 Atc_1691 da232da6b466b97aadabfb395e33b032 232 Pfam PF03749 Sugar fermentation stimulation protein 12 222 3.3E-72 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein Atc_1691 da232da6b466b97aadabfb395e33b032 232 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 2 223 3.2E-63 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein Atc_0843 8025e39261f3328c1d88a8a6d5bbe848 242 Gene3D G3DSA:3.40.1160.10 4 241 2.0E-81 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_0843 8025e39261f3328c1d88a8a6d5bbe848 242 PIRSF PIRSF005650 3 242 4.4E-96 T 13-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Atc_0843 8025e39261f3328c1d88a8a6d5bbe848 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 7 238 1.3E-102 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Atc_0843 8025e39261f3328c1d88a8a6d5bbe848 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 5 238 46.412 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Atc_0843 8025e39261f3328c1d88a8a6d5bbe848 242 SUPERFAMILY SSF53633 6 237 5.89E-75 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_0843 8025e39261f3328c1d88a8a6d5bbe848 242 Pfam PF00696 Amino acid kinase family 9 217 7.0E-29 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Atc_1068 4f9cf567c3a970497c24cc6eb7522bd9 638 Gene3D G3DSA:3.40.30.10 503 627 5.0E-27 T 13-10-2018 Atc_1068 4f9cf567c3a970497c24cc6eb7522bd9 638 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 214 421 1.3E-18 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Atc_1068 4f9cf567c3a970497c24cc6eb7522bd9 638 Gene3D G3DSA:2.60.40.1250 31 172 5.0E-28 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Atc_1068 4f9cf567c3a970497c24cc6eb7522bd9 638 Pfam PF11412 Disulphide bond corrector protein DsbC 38 155 1.1E-22 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Atc_1068 4f9cf567c3a970497c24cc6eb7522bd9 638 SUPERFAMILY SSF74863 37 155 2.48E-21 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Atc_1068 4f9cf567c3a970497c24cc6eb7522bd9 638 SUPERFAMILY SSF52833 510 623 1.57E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1068 4f9cf567c3a970497c24cc6eb7522bd9 638 Pfam PF13899 Thioredoxin-like 528 601 2.1E-9 T 13-10-2018 Atc_1020 b8e2645cca13463aebed69da9bb69887 335 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 37 328 4.0E-63 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Atc_1020 b8e2645cca13463aebed69da9bb69887 335 Pfam PF02618 YceG-like family 38 324 6.7E-68 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Atc_1020 b8e2645cca13463aebed69da9bb69887 335 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 9 328 29.258 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Atc_m045 112b2e7507dc48ea509a4f937c863817 348 SUPERFAMILY SSF46689 13 133 1.08E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_m045 112b2e7507dc48ea509a4f937c863817 348 Pfam PF13592 Winged helix-turn helix 100 156 1.7E-22 T 13-10-2018 IPR025959 Winged helix-turn helix domain Atc_m045 112b2e7507dc48ea509a4f937c863817 348 Pfam PF13518 Helix-turn-helix domain 21 68 9.9E-6 T 13-10-2018 Atc_m045 112b2e7507dc48ea509a4f937c863817 348 Pfam PF13358 DDE superfamily endonuclease 173 311 1.2E-34 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Atc_m045 112b2e7507dc48ea509a4f937c863817 348 Gene3D G3DSA:3.30.420.470 145 336 5.2E-10 T 13-10-2018 Atc_0763 7cf3a5c46122ff882d08ad461c8bed56 134 Gene3D G3DSA:1.20.120.20 2 133 1.6E-6 T 13-10-2018 Atc_2680 81de9d5c0f338c3eafe0860468b1eece 309 SUPERFAMILY SSF48452 87 166 1.83E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2680 81de9d5c0f338c3eafe0860468b1eece 309 Gene3D G3DSA:1.25.40.10 79 148 2.0E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 SMART SM00448 3 114 6.2E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 SUPERFAMILY SSF46689 351 441 1.29E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 Gene3D G3DSA:3.40.50.300 130 307 8.8E-61 T 13-10-2018 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 Pfam PF00158 Sigma-54 interaction domain 137 303 3.3E-67 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 SUPERFAMILY SSF52172 4 181 6.97E-43 T 13-10-2018 IPR011006 CheY-like superfamily Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 SUPERFAMILY SSF52540 137 381 2.8E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 Gene3D G3DSA:3.40.50.2300 2 129 5.5E-37 T 13-10-2018 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 Pfam PF02954 Bacterial regulatory protein, Fis family 399 437 2.0E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 Gene3D G3DSA:1.10.10.60 389 441 4.7E-12 T 13-10-2018 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 Gene3D G3DSA:1.10.8.60 308 387 6.4E-25 T 13-10-2018 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 SMART SM00382 157 300 3.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 442 5.8E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 5.8E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_2364 1ffce0474fe2db6d0aaf5274788f4086 455 Pfam PF00072 Response regulator receiver domain 5 114 2.9E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 Pfam PF13541 Subunit ChlI of Mg-chelatase 343 424 9.9E-10 T 13-10-2018 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 Gene3D G3DSA:3.30.230.10 331 450 1.0E-13 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 Gene3D G3DSA:3.40.50.300 65 282 4.5E-39 T 13-10-2018 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 SUPERFAMILY SSF54211 251 449 1.33E-37 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 Hamap MF_01498 DNA repair protein RadA [radA]. 21 449 43.663 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 Pfam PF13481 AAA domain 79 218 9.9E-15 T 13-10-2018 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 SMART SM00382 87 240 1.2E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 TIGRFAM TIGR00416 sms: DNA repair protein RadA 3 429 4.2E-181 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 PRINTS PR01874 DNA repair protein radA signature 244 270 2.1E-95 T 13-10-2018 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 PRINTS PR01874 DNA repair protein radA signature 79 107 2.1E-95 T 13-10-2018 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 PRINTS PR01874 DNA repair protein radA signature 318 341 2.1E-95 T 13-10-2018 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 PRINTS PR01874 DNA repair protein radA signature 209 237 2.1E-95 T 13-10-2018 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 PRINTS PR01874 DNA repair protein radA signature 10 34 2.1E-95 T 13-10-2018 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 PRINTS PR01874 DNA repair protein radA signature 120 137 2.1E-95 T 13-10-2018 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 PRINTS PR01874 DNA repair protein radA signature 170 194 2.1E-95 T 13-10-2018 Atc_0234 6e3ac7d229066f44dbd41577ee12e3cc 451 SUPERFAMILY SSF52540 66 288 5.95E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 SUPERFAMILY SSF52343 195 325 1.44E-31 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 Pfam PF00970 Oxidoreductase FAD-binding domain 101 191 5.8E-10 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 Pfam PF00175 Oxidoreductase NAD-binding domain 203 304 7.9E-11 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 291 299 8.5E-15 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 137 8.5E-15 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 227 236 8.5E-15 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 202 221 8.5E-15 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 SUPERFAMILY SSF63380 98 192 6.47E-25 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 143 150 2.3E-9 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 202 221 2.3E-9 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 291 299 2.3E-9 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 227 236 2.3E-9 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 Gene3D G3DSA:3.40.50.80 191 327 5.5E-29 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 Gene3D G3DSA:2.40.30.10 92 189 1.2E-25 T 13-10-2018 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 Gene3D G3DSA:3.10.20.30 1 91 1.5E-16 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 SUPERFAMILY SSF54292 2 88 1.97E-17 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atc_1922 9acf1e0e91f1ab221c162bb42d5f6f6e 328 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 77 1.5E-8 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Atc_2390 8a7291c462239ad1dc56ed96d0f9ad62 178 Gene3D G3DSA:3.40.50.1000 3 178 1.2E-53 T 13-10-2018 IPR023214 HAD superfamily Atc_2390 8a7291c462239ad1dc56ed96d0f9ad62 178 SUPERFAMILY SSF56784 3 175 1.55E-47 T 13-10-2018 IPR036412 HAD-like superfamily Atc_2390 8a7291c462239ad1dc56ed96d0f9ad62 178 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 144 1.2E-42 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Atc_2390 8a7291c462239ad1dc56ed96d0f9ad62 178 Pfam PF13242 HAD-hyrolase-like 100 171 1.8E-12 T 13-10-2018 Atc_2390 8a7291c462239ad1dc56ed96d0f9ad62 178 PIRSF PIRSF004682 1 178 7.9E-57 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Atc_2390 8a7291c462239ad1dc56ed96d0f9ad62 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 145 5.9E-34 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Atc_0496 7352ba33b8fb0e5fd1e3ae5223a5127d 335 Pfam PF01699 Sodium/calcium exchanger protein 3 159 2.8E-14 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Atc_0496 7352ba33b8fb0e5fd1e3ae5223a5127d 335 Pfam PF01699 Sodium/calcium exchanger protein 196 333 1.6E-14 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Atc_0496 7352ba33b8fb0e5fd1e3ae5223a5127d 335 Gene3D G3DSA:1.20.1420.30 33 327 4.0E-40 T 13-10-2018 Atc_0496 7352ba33b8fb0e5fd1e3ae5223a5127d 335 Gene3D G3DSA:1.20.58.1130 7 227 4.0E-40 T 13-10-2018 Atc_m188 d599d003d9ecbbbd38c39180dc3e2ebb 132 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 131 1.2E-27 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Atc_m188 d599d003d9ecbbbd38c39180dc3e2ebb 132 Gene3D G3DSA:3.30.420.270 60 127 5.6E-8 T 13-10-2018 Atc_1256 2063a767d51eadb3290814e933ba2572 776 SMART SM00493 2 123 1.6E-13 T 13-10-2018 IPR006171 TOPRIM domain Atc_1256 2063a767d51eadb3290814e933ba2572 776 Gene3D G3DSA:1.10.290.10 277 399 6.6E-147 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Atc_1256 2063a767d51eadb3290814e933ba2572 776 SMART SM00437 268 545 1.5E-77 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Atc_1256 2063a767d51eadb3290814e933ba2572 776 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 694 1.7E-170 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Atc_1256 2063a767d51eadb3290814e933ba2572 776 SMART SM00436 123 213 3.7E-28 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Atc_1256 2063a767d51eadb3290814e933ba2572 776 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 305 319 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Atc_1256 2063a767d51eadb3290814e933ba2572 776 Pfam PF01751 Toprim domain 4 128 1.8E-13 T 13-10-2018 IPR006171 TOPRIM domain Atc_1256 2063a767d51eadb3290814e933ba2572 776 Gene3D G3DSA:3.40.50.140 3 151 3.0E-42 T 13-10-2018 Atc_1256 2063a767d51eadb3290814e933ba2572 776 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 97 110 7.3E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_1256 2063a767d51eadb3290814e933ba2572 776 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 385 401 7.3E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_1256 2063a767d51eadb3290814e933ba2572 776 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 508 522 7.3E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_1256 2063a767d51eadb3290814e933ba2572 776 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 183 201 7.3E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_1256 2063a767d51eadb3290814e933ba2572 776 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 310 319 7.3E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_1256 2063a767d51eadb3290814e933ba2572 776 Gene3D G3DSA:2.70.20.10 207 475 6.6E-147 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Atc_1256 2063a767d51eadb3290814e933ba2572 776 SUPERFAMILY SSF56712 3 598 1.03E-162 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Atc_1256 2063a767d51eadb3290814e933ba2572 776 Pfam PF01131 DNA topoisomerase 150 582 5.1E-113 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atc_1256 2063a767d51eadb3290814e933ba2572 776 Gene3D G3DSA:1.10.460.10 157 593 6.6E-147 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Atc_1774 021ee7f1ed94b12bab7df74d88f8bb87 180 Gene3D G3DSA:2.30.30.830 94 177 2.5E-14 T 13-10-2018 Atc_1774 021ee7f1ed94b12bab7df74d88f8bb87 180 Pfam PF04351 Pilus assembly protein, PilP 29 176 1.8E-33 T 13-10-2018 IPR007446 Pilus assembly protein PilP Atc_2676 450dddc0951ab138732afee23bed3631 202 Pfam PF07021 Methionine biosynthesis protein MetW 5 196 1.3E-79 T 13-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 Atc_2676 450dddc0951ab138732afee23bed3631 202 Gene3D G3DSA:3.40.50.150 4 171 9.6E-24 T 13-10-2018 Atc_2676 450dddc0951ab138732afee23bed3631 202 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 5 196 1.1E-80 T 13-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 Atc_2676 450dddc0951ab138732afee23bed3631 202 SUPERFAMILY SSF53335 6 188 1.56E-27 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0986 815a0305359003ccdbfb001b83e67be5 193 Gene3D G3DSA:3.30.530.20 53 191 1.6E-14 T 13-10-2018 IPR023393 START-like domain superfamily Atc_0986 815a0305359003ccdbfb001b83e67be5 193 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 53 189 6.2E-9 T 13-10-2018 IPR019587 Polyketide cyclase/dehydrase Atc_0986 815a0305359003ccdbfb001b83e67be5 193 SUPERFAMILY SSF55961 56 188 2.81E-13 T 13-10-2018 Atc_1426 86b8c20d39a23585db1751b59fd5f402 165 Gene3D G3DSA:3.40.30.10 1 164 3.5E-40 T 13-10-2018 Atc_1426 86b8c20d39a23585db1751b59fd5f402 165 ProSitePatterns PS01265 Tpx family signature. 81 92 - T 13-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 Atc_1426 86b8c20d39a23585db1751b59fd5f402 165 Pfam PF08534 Redoxin 19 160 6.4E-19 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Atc_1426 86b8c20d39a23585db1751b59fd5f402 165 Hamap MF_00269 Thiol peroxidase [tpx]. 2 164 33.791 T 13-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 Atc_1426 86b8c20d39a23585db1751b59fd5f402 165 SUPERFAMILY SSF52833 3 161 1.81E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1079 f6fe983c9c85adf8bee80bacc49d0042 565 Gene3D G3DSA:3.40.50.300 1 221 7.0E-63 T 13-10-2018 Atc_1079 f6fe983c9c85adf8bee80bacc49d0042 565 Gene3D G3DSA:3.40.50.300 303 551 3.0E-64 T 13-10-2018 Atc_1079 f6fe983c9c85adf8bee80bacc49d0042 565 SMART SM00382 24 205 1.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1079 f6fe983c9c85adf8bee80bacc49d0042 565 SMART SM00382 340 522 1.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1079 f6fe983c9c85adf8bee80bacc49d0042 565 Pfam PF00005 ABC transporter 332 475 2.5E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_1079 f6fe983c9c85adf8bee80bacc49d0042 565 SUPERFAMILY SSF52540 312 537 1.54E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1079 f6fe983c9c85adf8bee80bacc49d0042 565 Pfam PF00005 ABC transporter 15 158 1.3E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_1079 f6fe983c9c85adf8bee80bacc49d0042 565 SUPERFAMILY SSF52540 8 217 1.13E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1079 f6fe983c9c85adf8bee80bacc49d0042 565 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_m251 66d08e0e1619610b7bed2ae097f3c220 155 Pfam PF03050 Transposase IS66 family 1 92 4.0E-25 T 13-10-2018 IPR004291 Transposase, IS66 Atc_2840 89e46005da7029530acf9e9f73d94d92 76 Gene3D G3DSA:3.10.290.10 1 76 5.1E-17 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atc_2840 89e46005da7029530acf9e9f73d94d92 76 SUPERFAMILY SSF55174 2 60 4.32E-13 T 13-10-2018 Atc_2840 89e46005da7029530acf9e9f73d94d92 76 Pfam PF01479 S4 domain 3 38 1.3E-6 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0816 89e175d67f00744b02c82166e9de2a2c 558 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_0816 89e175d67f00744b02c82166e9de2a2c 558 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_0816 89e175d67f00744b02c82166e9de2a2c 558 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 557 4.3E-231 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_0816 89e175d67f00744b02c82166e9de2a2c 558 Pfam PF00920 Dehydratase family 31 554 2.1E-217 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_0816 89e175d67f00744b02c82166e9de2a2c 558 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 557 45.161 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_0816 89e175d67f00744b02c82166e9de2a2c 558 SUPERFAMILY SSF143975 1 376 1.7E-126 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atc_0816 89e175d67f00744b02c82166e9de2a2c 558 SUPERFAMILY SSF52016 377 557 7.22E-61 T 13-10-2018 Atc_0816 89e175d67f00744b02c82166e9de2a2c 558 Gene3D G3DSA:3.50.30.80 377 528 4.4E-55 T 13-10-2018 Atc_m076 47feaba05659234f1e9575ca47603cc7 163 SUPERFAMILY SSF46955 14 140 8.79E-35 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Atc_m076 47feaba05659234f1e9575ca47603cc7 163 SMART SM00422 14 83 5.0E-28 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_m076 47feaba05659234f1e9575ca47603cc7 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 26 39 9.4E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_m076 47feaba05659234f1e9575ca47603cc7 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 26 9.4E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_m076 47feaba05659234f1e9575ca47603cc7 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 50 70 9.4E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_m076 47feaba05659234f1e9575ca47603cc7 163 Gene3D G3DSA:1.10.1660.10 11 138 6.0E-35 T 13-10-2018 Atc_m076 47feaba05659234f1e9575ca47603cc7 163 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 14 140 2.1E-45 T 13-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 Atc_m076 47feaba05659234f1e9575ca47603cc7 163 Pfam PF13411 MerR HTH family regulatory protein 14 81 4.4E-19 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_0034 3adcbf4d40d7afab00b66411951bae17 141 SUPERFAMILY SSF46604 88 135 7.85E-11 T 13-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0034 3adcbf4d40d7afab00b66411951bae17 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 130 22.388 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0034 3adcbf4d40d7afab00b66411951bae17 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 85 1.0E-32 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0034 3adcbf4d40d7afab00b66411951bae17 141 Gene3D G3DSA:2.60.15.10 2 89 3.0E-31 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0034 3adcbf4d40d7afab00b66411951bae17 141 SUPERFAMILY SSF51344 3 85 1.44E-23 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0034 3adcbf4d40d7afab00b66411951bae17 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 83 2.3E-29 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0034 3adcbf4d40d7afab00b66411951bae17 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 1.3E-9 T 13-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Atc_0034 3adcbf4d40d7afab00b66411951bae17 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 132 4.3E-39 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0034 3adcbf4d40d7afab00b66411951bae17 141 Gene3D G3DSA:1.20.5.440 90 132 1.4E-12 T 13-10-2018 Atc_0605 33a552158e0aa9329e8b33d7e47fbcb8 210 Pfam PF00297 Ribosomal protein L3 100 183 4.9E-16 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0605 33a552158e0aa9329e8b33d7e47fbcb8 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 39.142 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0605 33a552158e0aa9329e8b33d7e47fbcb8 210 Gene3D G3DSA:2.40.50.620 33 89 8.9E-14 T 13-10-2018 Atc_0605 33a552158e0aa9329e8b33d7e47fbcb8 210 Gene3D G3DSA:2.40.30.10 130 210 1.1E-14 T 13-10-2018 Atc_0605 33a552158e0aa9329e8b33d7e47fbcb8 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 1.0E-86 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0605 33a552158e0aa9329e8b33d7e47fbcb8 210 SUPERFAMILY SSF50447 2 209 6.27E-78 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atc_0605 33a552158e0aa9329e8b33d7e47fbcb8 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site Atc_0581 07b8e2ab867eb634353325132bba94fc 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 1 352 1.3E-106 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Atc_0581 07b8e2ab867eb634353325132bba94fc 369 Pfam PF01872 RibD C-terminal domain 141 351 8.9E-43 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Atc_0581 07b8e2ab867eb634353325132bba94fc 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 140 353 3.4E-45 T 13-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Atc_0581 07b8e2ab867eb634353325132bba94fc 369 Gene3D G3DSA:3.40.140.10 1 129 2.6E-43 T 13-10-2018 Atc_0581 07b8e2ab867eb634353325132bba94fc 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 44 82 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Atc_0581 07b8e2ab867eb634353325132bba94fc 369 PIRSF PIRSF006769 1 358 5.1E-116 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Atc_0581 07b8e2ab867eb634353325132bba94fc 369 SUPERFAMILY SSF53927 1 138 6.19E-46 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Atc_0581 07b8e2ab867eb634353325132bba94fc 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 93 6.0E-18 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Atc_0581 07b8e2ab867eb634353325132bba94fc 369 SUPERFAMILY SSF53597 139 352 3.44E-54 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Atc_0581 07b8e2ab867eb634353325132bba94fc 369 Gene3D G3DSA:3.40.430.10 130 362 2.0E-60 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Atc_1684 a1abdd889952a5d3200b14b055d7a9b4 160 Gene3D G3DSA:1.10.10.10 101 149 1.0E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1684 a1abdd889952a5d3200b14b055d7a9b4 160 Pfam PF02631 RecX family 39 148 1.9E-19 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Atc_1733 f38fc1e9012e8c518786450b53a0c7a9 341 SUPERFAMILY SSF53850 26 337 2.21E-89 T 13-10-2018 Atc_1733 f38fc1e9012e8c518786450b53a0c7a9 341 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 27 337 7.9E-108 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Atc_1733 f38fc1e9012e8c518786450b53a0c7a9 341 PIRSF PIRSF002756 4 338 4.0E-99 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Atc_1733 f38fc1e9012e8c518786450b53a0c7a9 341 Pfam PF12849 PBP superfamily domain 22 307 3.9E-57 T 13-10-2018 IPR024370 PBP domain Atc_1733 f38fc1e9012e8c518786450b53a0c7a9 341 Gene3D G3DSA:3.40.190.10 28 325 1.9E-112 T 13-10-2018 Atc_1733 f38fc1e9012e8c518786450b53a0c7a9 341 Gene3D G3DSA:3.40.190.10 101 278 1.9E-112 T 13-10-2018 Atc_1409 e8a864481d92ba0781785b016f59fdd1 376 Pfam PF03734 L,D-transpeptidase catalytic domain 152 282 1.9E-5 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atc_1409 e8a864481d92ba0781785b016f59fdd1 376 SUPERFAMILY SSF141523 141 282 1.18E-9 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_2668 3ea132247515bec40098fa57da3b90f6 509 SUPERFAMILY SSF64158 80 306 6.15E-78 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_2668 3ea132247515bec40098fa57da3b90f6 509 PIRSF PIRSF001492 2 508 2.1E-192 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_2668 3ea132247515bec40098fa57da3b90f6 509 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 8 506 1.9E-206 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_2668 3ea132247515bec40098fa57da3b90f6 509 Pfam PF01676 Metalloenzyme superfamily 8 495 4.2E-74 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Atc_2668 3ea132247515bec40098fa57da3b90f6 509 SUPERFAMILY SSF53649 7 506 2.49E-72 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Atc_2668 3ea132247515bec40098fa57da3b90f6 509 Gene3D G3DSA:3.40.720.10 8 506 2.1E-205 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atc_2668 3ea132247515bec40098fa57da3b90f6 509 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 7 507 48.268 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_2668 3ea132247515bec40098fa57da3b90f6 509 Gene3D G3DSA:3.40.1450.10 80 308 2.1E-205 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_2668 3ea132247515bec40098fa57da3b90f6 509 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 295 5.9E-72 T 13-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atc_2026 57d9ebc1a5fc0f288b06a6aa7568bd29 346 Gene3D G3DSA:3.30.450.90 40 128 1.5E-8 T 13-10-2018 Atc_2026 57d9ebc1a5fc0f288b06a6aa7568bd29 346 Gene3D G3DSA:3.40.50.300 132 330 1.8E-57 T 13-10-2018 Atc_2026 57d9ebc1a5fc0f288b06a6aa7568bd29 346 Pfam PF00437 Type II/IV secretion system protein 43 312 6.9E-64 T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_2026 57d9ebc1a5fc0f288b06a6aa7568bd29 346 SUPERFAMILY SSF52540 42 324 3.03E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1826 1ee66d2fa881ca300f986b6d417e631d 123 Pfam PF04977 Septum formation initiator 34 111 1.4E-18 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Atc_1826 1ee66d2fa881ca300f986b6d417e631d 123 Hamap MF_00599 Cell division protein FtsB [ftsB]. 26 113 22.67 T 13-10-2018 IPR023081 Cell division protein FtsB Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 SUPERFAMILY SSF55424 323 445 5.33E-27 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 Gene3D G3DSA:3.50.50.60 110 440 3.6E-148 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 307 1.0E-52 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 Gene3D G3DSA:3.50.50.60 4 340 3.6E-148 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.3E-23 T 13-10-2018 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 3.3E-23 T 13-10-2018 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 3.3E-23 T 13-10-2018 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 3.3E-23 T 13-10-2018 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 402 3.3E-23 T 13-10-2018 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 3.0E-26 T 13-10-2018 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 3.0E-26 T 13-10-2018 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 3.0E-26 T 13-10-2018 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.0E-26 T 13-10-2018 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 3.0E-26 T 13-10-2018 Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 SUPERFAMILY SSF51905 3 346 2.99E-40 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_3p04 a789508fa6008b39fbe9b5cf63dfb60e 482 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 328 432 1.8E-11 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atc_1587 25b30e2f14c408fcfe5d263b0c45f762 477 SUPERFAMILY SSF103473 16 449 4.71E-78 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_1587 25b30e2f14c408fcfe5d263b0c45f762 477 ProSitePatterns PS00217 Sugar transport proteins signature 2. 125 150 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atc_1587 25b30e2f14c408fcfe5d263b0c45f762 477 Pfam PF00083 Sugar (and other) transporter 32 449 3.0E-58 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atc_1179 360557c4b5a9acc2079a1c005a9269ad 123 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 1 78 1.3E-11 T 13-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB Atc_1179 360557c4b5a9acc2079a1c005a9269ad 123 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 1 77 1.0E-5 T 13-10-2018 Atc_2627 8b1b0be720fcc79ca6c683e8830c2654 250 Pfam PF12697 Alpha/beta hydrolase family 14 239 2.0E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atc_2627 8b1b0be720fcc79ca6c683e8830c2654 250 Gene3D G3DSA:3.40.50.1820 3 247 3.0E-53 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_2627 8b1b0be720fcc79ca6c683e8830c2654 250 SUPERFAMILY SSF53474 9 249 5.67E-43 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_2627 8b1b0be720fcc79ca6c683e8830c2654 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 78 91 5.7E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atc_2627 8b1b0be720fcc79ca6c683e8830c2654 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 196 210 5.7E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atc_2627 8b1b0be720fcc79ca6c683e8830c2654 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 37 52 5.7E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atc_2627 8b1b0be720fcc79ca6c683e8830c2654 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 5.7E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atc_2642 5ae84fc2d603d0835d0d649a7072c1fa 321 Gene3D G3DSA:3.90.550.10 1 230 1.1E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2642 5ae84fc2d603d0835d0d649a7072c1fa 321 Pfam PF00535 Glycosyl transferase family 2 5 166 3.8E-32 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atc_2642 5ae84fc2d603d0835d0d649a7072c1fa 321 SUPERFAMILY SSF53448 1 259 9.96E-50 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2396 cc533f335d0b9a2ae325e73aadcff534 193 Pfam PF08534 Redoxin 42 165 3.3E-23 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Atc_2396 cc533f335d0b9a2ae325e73aadcff534 193 Gene3D G3DSA:3.40.30.10 39 185 1.0E-37 T 13-10-2018 Atc_2396 cc533f335d0b9a2ae325e73aadcff534 193 SUPERFAMILY SSF52833 41 185 5.18E-38 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1668 f9de69b41b93656847c47aa29f70c3ba 483 Pfam PF00361 Proton-conducting membrane transporter 123 415 3.0E-50 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1668 f9de69b41b93656847c47aa29f70c3ba 483 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 2.3E-8 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1668 f9de69b41b93656847c47aa29f70c3ba 483 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 2.3E-8 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1668 f9de69b41b93656847c47aa29f70c3ba 483 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 2.3E-8 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1910 c9fd7429abef8b4387c5307dfebd39e3 210 SUPERFAMILY SSF52833 56 202 1.0E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1910 c9fd7429abef8b4387c5307dfebd39e3 210 Pfam PF13098 Thioredoxin-like domain 63 202 1.5E-15 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_1910 c9fd7429abef8b4387c5307dfebd39e3 210 Gene3D G3DSA:3.40.30.10 58 210 4.4E-29 T 13-10-2018 Atc_0543 c9fd7429abef8b4387c5307dfebd39e3 210 SUPERFAMILY SSF52833 56 202 1.0E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0543 c9fd7429abef8b4387c5307dfebd39e3 210 Pfam PF13098 Thioredoxin-like domain 63 202 1.5E-15 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_0543 c9fd7429abef8b4387c5307dfebd39e3 210 Gene3D G3DSA:3.40.30.10 58 210 4.4E-29 T 13-10-2018 Atc_1095 c0d05165fa8195ab385f787f232c9f66 112 SUPERFAMILY SSF46785 3 103 2.05E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1095 c0d05165fa8195ab385f787f232c9f66 112 Pfam PF01638 HxlR-like helix-turn-helix 8 95 5.3E-24 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type Atc_1095 c0d05165fa8195ab385f787f232c9f66 112 Gene3D G3DSA:1.10.10.10 1 110 7.2E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.98 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.8E-70 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 Pfam PF00164 Ribosomal protein S12/S23 13 123 3.6E-44 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 Gene3D G3DSA:2.40.50.140 1 123 1.3E-64 T 13-10-2018 Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 PIRSF PIRSF002133 1 123 5.9E-55 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 SUPERFAMILY SSF50249 2 123 3.86E-53 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0600 0c611392d80d3d493f2f8641a6e674d9 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0201 992c18f1788351c67cddd1b979358a69 690 SUPERFAMILY SSF141868 347 588 1.06E-55 T 13-10-2018 IPR035919 EAL domain superfamily Atc_0201 992c18f1788351c67cddd1b979358a69 690 Gene3D G3DSA:3.30.450.40 157 334 2.7E-11 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_0201 992c18f1788351c67cddd1b979358a69 690 Pfam PF00563 EAL domain 348 576 2.5E-45 T 13-10-2018 IPR001633 EAL domain Atc_0201 992c18f1788351c67cddd1b979358a69 690 SUPERFAMILY SSF55781 157 327 9.53E-10 T 13-10-2018 Atc_0201 992c18f1788351c67cddd1b979358a69 690 Gene3D G3DSA:3.20.20.450 344 593 2.1E-57 T 13-10-2018 IPR035919 EAL domain superfamily Atc_0201 992c18f1788351c67cddd1b979358a69 690 Pfam PF13185 GAF domain 174 308 9.6E-9 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_0201 992c18f1788351c67cddd1b979358a69 690 SUPERFAMILY SSF46458 21 149 1.37E-8 T 13-10-2018 IPR009050 Globin-like superfamily Atc_0201 992c18f1788351c67cddd1b979358a69 690 Gene3D G3DSA:1.10.490.10 12 156 3.2E-18 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Atc_0201 992c18f1788351c67cddd1b979358a69 690 SMART SM00052 335 581 3.8E-34 T 13-10-2018 IPR001633 EAL domain Atc_0201 992c18f1788351c67cddd1b979358a69 690 Pfam PF11563 Protoglobin 17 154 5.1E-9 T 13-10-2018 Atc_0092 5ade039d23c8139a83df27353814e2b3 374 Pfam PF02661 Fic/DOC family 118 229 5.1E-17 T 13-10-2018 IPR003812 Fido domain Atc_0092 5ade039d23c8139a83df27353814e2b3 374 Gene3D G3DSA:1.10.3290.10 45 295 2.5E-43 T 13-10-2018 IPR036597 Fido-like domain superfamily Atc_0092 5ade039d23c8139a83df27353814e2b3 374 Pfam PF13776 Domain of unknown function (DUF4172) 8 89 3.1E-31 T 13-10-2018 IPR025230 Domain of unknown function DUF4172 Atc_0092 5ade039d23c8139a83df27353814e2b3 374 SUPERFAMILY SSF140931 102 299 3.92E-37 T 13-10-2018 IPR036597 Fido-like domain superfamily Atc_2177 b51fab9d9975736659c8bc3302d8bad1 360 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 2 354 51.328 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Atc_2177 b51fab9d9975736659c8bc3302d8bad1 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Atc_2177 b51fab9d9975736659c8bc3302d8bad1 360 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 349 1.0E-151 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Atc_2177 b51fab9d9975736659c8bc3302d8bad1 360 SMART SM01329 3 350 3.9E-201 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Atc_2177 b51fab9d9975736659c8bc3302d8bad1 360 SUPERFAMILY SSF53659 2 354 3.06E-122 T 13-10-2018 Atc_2177 b51fab9d9975736659c8bc3302d8bad1 360 Gene3D G3DSA:3.40.718.10 1 358 5.1E-153 T 13-10-2018 Atc_2177 b51fab9d9975736659c8bc3302d8bad1 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 350 3.4E-136 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Atc_1935 10fa789f54b68bf1bece16e0c5a97985 1260 Pfam PF01568 Molydopterin dinucleotide binding domain 1091 1205 1.0E-17 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Atc_1935 10fa789f54b68bf1bece16e0c5a97985 1260 SUPERFAMILY SSF53706 4 1070 0.0 T 13-10-2018 Atc_1935 10fa789f54b68bf1bece16e0c5a97985 1260 Pfam PF00384 Molybdopterin oxidoreductase 108 835 1.0E-145 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1935 10fa789f54b68bf1bece16e0c5a97985 1260 Gene3D G3DSA:3.40.50.12440 44 1251 0.0 T 13-10-2018 Atc_1935 10fa789f54b68bf1bece16e0c5a97985 1260 SUPERFAMILY SSF50692 1089 1239 4.52E-39 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atc_1935 10fa789f54b68bf1bece16e0c5a97985 1260 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 9.9E-16 T 13-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Atc_1935 10fa789f54b68bf1bece16e0c5a97985 1260 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Atc_1935 10fa789f54b68bf1bece16e0c5a97985 1260 SMART SM00926 43 105 6.0E-8 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1935 10fa789f54b68bf1bece16e0c5a97985 1260 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1241 0.0 T 13-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Atc_2695 b88ccc19d00680fa09c9465de9bfae69 302 Gene3D G3DSA:1.10.10.10 1 90 7.8E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2695 b88ccc19d00680fa09c9465de9bfae69 302 Gene3D G3DSA:3.40.190.290 95 298 7.8E-37 T 13-10-2018 Atc_2695 b88ccc19d00680fa09c9465de9bfae69 302 Pfam PF03466 LysR substrate binding domain 93 294 1.7E-35 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_2695 b88ccc19d00680fa09c9465de9bfae69 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2695 b88ccc19d00680fa09c9465de9bfae69 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2695 b88ccc19d00680fa09c9465de9bfae69 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2695 b88ccc19d00680fa09c9465de9bfae69 302 SUPERFAMILY SSF46785 4 116 1.54E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_2695 b88ccc19d00680fa09c9465de9bfae69 302 SUPERFAMILY SSF53850 92 298 1.18E-33 T 13-10-2018 Atc_2695 b88ccc19d00680fa09c9465de9bfae69 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 66 2.7E-12 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 Hamap MF_01576 Bifunctional protein FolD [folD]. 14 294 37.233 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 135 293 8.3E-68 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 Gene3D G3DSA:3.40.50.10860 19 287 1.1E-102 T 13-10-2018 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 271 279 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 SUPERFAMILY SSF53223 12 133 1.34E-35 T 13-10-2018 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 16 132 2.5E-35 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 121 142 3.1E-80 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 166 186 3.1E-80 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 86 113 3.1E-80 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 267 285 3.1E-80 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 250 266 3.1E-80 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 45 67 3.1E-80 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 215 244 3.1E-80 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 Gene3D G3DSA:3.40.50.720 17 270 1.1E-102 T 13-10-2018 Atc_2145 c153e9398ef0921e60da482b07c8fd8f 304 SUPERFAMILY SSF51735 134 292 3.33E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1692 fe4b5cb56d220e69b6bde3141be75612 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 175 187 1.1E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atc_1692 fe4b5cb56d220e69b6bde3141be75612 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 83 96 1.1E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atc_1692 fe4b5cb56d220e69b6bde3141be75612 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 105 121 1.1E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atc_1692 fe4b5cb56d220e69b6bde3141be75612 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 206 218 1.1E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atc_1692 fe4b5cb56d220e69b6bde3141be75612 269 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 181 199 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atc_1692 fe4b5cb56d220e69b6bde3141be75612 269 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 12 263 3.6E-97 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atc_1692 fe4b5cb56d220e69b6bde3141be75612 269 Hamap MF_01974 Methionine aminopeptidase [map]. 11 264 41.757 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atc_1692 fe4b5cb56d220e69b6bde3141be75612 269 Pfam PF00557 Metallopeptidase family M24 20 255 1.7E-52 T 13-10-2018 IPR000994 Peptidase M24 Atc_1692 fe4b5cb56d220e69b6bde3141be75612 269 SUPERFAMILY SSF55920 13 267 1.31E-90 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Atc_1692 fe4b5cb56d220e69b6bde3141be75612 269 Gene3D G3DSA:3.90.230.10 10 267 1.1E-108 T 13-10-2018 Atc_2532 b60220d66a2fededb588438ea18bb74d 639 SUPERFAMILY SSF52540 147 398 3.22E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2532 b60220d66a2fededb588438ea18bb74d 639 Gene3D G3DSA:1.10.8.60 329 405 5.5E-30 T 13-10-2018 Atc_2532 b60220d66a2fededb588438ea18bb74d 639 SUPERFAMILY SSF140990 408 605 1.57E-72 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Atc_2532 b60220d66a2fededb588438ea18bb74d 639 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 596 4.3E-240 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Atc_2532 b60220d66a2fededb588438ea18bb74d 639 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 326 2.3E-44 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atc_2532 b60220d66a2fededb588438ea18bb74d 639 Pfam PF06480 FtsH Extracellular 9 97 5.8E-12 T 13-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Atc_2532 b60220d66a2fededb588438ea18bb74d 639 Gene3D G3DSA:2.40.50.920 28 102 3.0E-13 T 13-10-2018 Atc_2532 b60220d66a2fededb588438ea18bb74d 639 Gene3D G3DSA:1.20.58.760 408 605 4.1E-74 T 13-10-2018 Atc_2532 b60220d66a2fededb588438ea18bb74d 639 Gene3D G3DSA:3.40.50.300 142 328 2.3E-70 T 13-10-2018 Atc_2532 b60220d66a2fededb588438ea18bb74d 639 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 608 37.787 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Atc_2532 b60220d66a2fededb588438ea18bb74d 639 Pfam PF01434 Peptidase family M41 388 595 9.5E-82 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Atc_2532 b60220d66a2fededb588438ea18bb74d 639 SMART SM00382 190 329 2.5E-24 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2532 b60220d66a2fededb588438ea18bb74d 639 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Atc_m132 b5dae3833dc67e176d74e94d70f98e5f 477 Pfam PF14239 RRXRR protein 3 199 1.4E-42 T 13-10-2018 IPR025938 RRXRR domain Atc_m132 b5dae3833dc67e176d74e94d70f98e5f 477 Pfam PF01844 HNH endonuclease 222 263 3.2E-6 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Atc_m132 b5dae3833dc67e176d74e94d70f98e5f 477 SMART SM00507 210 259 3.9E-8 T 13-10-2018 IPR003615 HNH nuclease Atc_1369 052ebced96bbde8e04c54094cadd9929 366 SUPERFAMILY SSF56014 266 354 7.27E-13 T 13-10-2018 Atc_1369 052ebced96bbde8e04c54094cadd9929 366 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 1.9E-133 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Atc_1369 052ebced96bbde8e04c54094cadd9929 366 SUPERFAMILY SSF51604 23 138 8.83E-10 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atc_1369 052ebced96bbde8e04c54094cadd9929 366 Pfam PF04551 GcpE protein 13 353 5.9E-138 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Atc_1369 052ebced96bbde8e04c54094cadd9929 366 PIRSF PIRSF004640 1 363 2.2E-152 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Atc_1369 052ebced96bbde8e04c54094cadd9929 366 Gene3D G3DSA:3.20.20.20 1 261 2.0E-109 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atc_1369 052ebced96bbde8e04c54094cadd9929 366 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 35.622 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Atc_1369 052ebced96bbde8e04c54094cadd9929 366 Gene3D G3DSA:3.30.413.10 262 360 5.1E-29 T 13-10-2018 Atc_2346 eae1d744e493133489b45619d4fb5d4e 148 SUPERFAMILY SSF51230 11 113 2.25E-17 T 13-10-2018 IPR011053 Single hybrid motif Atc_2346 eae1d744e493133489b45619d4fb5d4e 148 Pfam PF01597 Glycine cleavage H-protein 12 117 1.7E-27 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Atc_2346 eae1d744e493133489b45619d4fb5d4e 148 Gene3D G3DSA:2.40.50.100 6 127 5.4E-23 T 13-10-2018 Atc_1966 c680feec1f25b77444a1e7ca039ce146 130 Pfam PF01042 Endoribonuclease L-PSP 8 125 5.1E-39 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Atc_1966 c680feec1f25b77444a1e7ca039ce146 130 Gene3D G3DSA:3.30.1330.40 1 129 8.0E-48 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atc_1966 c680feec1f25b77444a1e7ca039ce146 130 SUPERFAMILY SSF55298 2 126 4.87E-42 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atc_1966 c680feec1f25b77444a1e7ca039ce146 130 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 7.4E-46 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Atc_1966 c680feec1f25b77444a1e7ca039ce146 130 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Atc_1771 a981a5d91931424f3a271a9840864a1e 348 Gene3D G3DSA:3.30.420.40 183 310 2.7E-78 T 13-10-2018 Atc_1771 a981a5d91931424f3a271a9840864a1e 348 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 9 345 1.2E-84 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM Atc_1771 a981a5d91931424f3a271a9840864a1e 348 Gene3D G3DSA:3.30.1490.300 85 144 2.7E-78 T 13-10-2018 Atc_1771 a981a5d91931424f3a271a9840864a1e 348 SUPERFAMILY SSF53067 67 172 2.14E-11 T 13-10-2018 Atc_1771 a981a5d91931424f3a271a9840864a1e 348 Gene3D G3DSA:3.30.420.40 10 344 2.7E-78 T 13-10-2018 Atc_1771 a981a5d91931424f3a271a9840864a1e 348 Pfam PF11104 Type IV pilus assembly protein PilM; 11 345 1.5E-96 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM Atc_1771 a981a5d91931424f3a271a9840864a1e 348 PIRSF PIRSF019169 2 347 2.1E-100 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM Atc_1771 a981a5d91931424f3a271a9840864a1e 348 SUPERFAMILY SSF53067 185 343 9.79E-10 T 13-10-2018 Atc_0646 4fd3a692429deff25761ff9455952f0d 250 SUPERFAMILY SSF52317 7 237 4.59E-40 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_0646 4fd3a692429deff25761ff9455952f0d 250 Pfam PF17124 ThiJ/PfpI family-like 26 133 2.9E-7 T 13-10-2018 IPR032633 ThiJ/PfpI family-like Atc_0646 4fd3a692429deff25761ff9455952f0d 250 Gene3D G3DSA:3.40.50.880 1 247 2.3E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 PIRSF PIRSF000774 1 477 7.1E-155 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 365 384 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 49 2.0E-16 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 Pfam PF04963 Sigma-54 factor, core binding domain 115 306 1.6E-58 T 13-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 456 463 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 475 1.4E-154 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 Gene3D G3DSA:1.10.10.60 418 475 2.1E-22 T 13-10-2018 Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 Gene3D G3DSA:1.10.10.1330 121 241 3.7E-24 T 13-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 Pfam PF04552 Sigma-54, DNA binding domain 318 476 1.4E-69 T 13-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 PRINTS PR00045 Sigma-54 factor signature 377 389 1.9E-31 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 PRINTS PR00045 Sigma-54 factor signature 393 404 1.9E-31 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 PRINTS PR00045 Sigma-54 factor signature 451 469 1.9E-31 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atc_0372 d9a70a56f0651e5ee1e8e901a9244ab5 477 PRINTS PR00045 Sigma-54 factor signature 188 205 1.9E-31 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atc_0358 e8a847e1343ad2db3bbc70a520fff897 110 Gene3D G3DSA:3.40.30.10 7 103 1.0E-32 T 13-10-2018 Atc_0358 e8a847e1343ad2db3bbc70a520fff897 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 102 4.0E-44 T 13-10-2018 IPR004480 Monothiol glutaredoxin-related Atc_0358 e8a847e1343ad2db3bbc70a520fff897 110 PIRSF PIRSF005894 1 109 1.3E-46 T 13-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 Atc_0358 e8a847e1343ad2db3bbc70a520fff897 110 Pfam PF00462 Glutaredoxin 17 82 4.2E-19 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Atc_0358 e8a847e1343ad2db3bbc70a520fff897 110 SUPERFAMILY SSF52833 2 103 1.56E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1320 855759acabd00faabfd6333b680d1877 321 SUPERFAMILY SSF53474 14 319 4.57E-34 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_1320 855759acabd00faabfd6333b680d1877 321 Gene3D G3DSA:3.40.50.1820 50 315 8.8E-23 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_1320 855759acabd00faabfd6333b680d1877 321 PIRSF PIRSF005211 5 321 2.6E-97 T 13-10-2018 IPR012020 AB hydrolase 4 family Atc_1320 855759acabd00faabfd6333b680d1877 321 Pfam PF12146 Serine aminopeptidase, S33 59 270 1.6E-11 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 Atc_2504 dcae9930423b19697d5ca87a9321422d 375 Gene3D G3DSA:2.60.260.20 253 362 6.7E-29 T 13-10-2018 Atc_2504 dcae9930423b19697d5ca87a9321422d 375 SUPERFAMILY SSF46565 1 107 7.85E-37 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Atc_2504 dcae9930423b19697d5ca87a9321422d 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 13-10-2018 IPR018253 DnaJ domain, conserved site Atc_2504 dcae9930423b19697d5ca87a9321422d 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 1.1E-133 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Atc_2504 dcae9930423b19697d5ca87a9321422d 375 Gene3D G3DSA:1.10.287.110 1 113 1.0E-37 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Atc_2504 dcae9930423b19697d5ca87a9321422d 375 PRINTS PR00625 DnaJ domain signature 25 40 1.0E-32 T 13-10-2018 IPR001623 DnaJ domain Atc_2504 dcae9930423b19697d5ca87a9321422d 375 PRINTS PR00625 DnaJ domain signature 42 62 1.0E-32 T 13-10-2018 IPR001623 DnaJ domain Atc_2504 dcae9930423b19697d5ca87a9321422d 375 PRINTS PR00625 DnaJ domain signature 62 81 1.0E-32 T 13-10-2018 IPR001623 DnaJ domain Atc_2504 dcae9930423b19697d5ca87a9321422d 375 PRINTS PR00625 DnaJ domain signature 7 25 1.0E-32 T 13-10-2018 IPR001623 DnaJ domain Atc_2504 dcae9930423b19697d5ca87a9321422d 375 Gene3D G3DSA:2.60.260.20 116 248 5.3E-37 T 13-10-2018 Atc_2504 dcae9930423b19697d5ca87a9321422d 375 Pfam PF00684 DnaJ central domain 146 206 2.2E-12 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Atc_2504 dcae9930423b19697d5ca87a9321422d 375 Pfam PF00226 DnaJ domain 5 67 1.1E-29 T 13-10-2018 IPR001623 DnaJ domain Atc_2504 dcae9930423b19697d5ca87a9321422d 375 SMART SM00271 4 62 1.7E-34 T 13-10-2018 IPR001623 DnaJ domain Atc_2504 dcae9930423b19697d5ca87a9321422d 375 SUPERFAMILY SSF57938 133 210 1.7E-20 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Atc_2504 dcae9930423b19697d5ca87a9321422d 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 41.384 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Atc_2504 dcae9930423b19697d5ca87a9321422d 375 SUPERFAMILY SSF49493 258 343 4.97E-21 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Atc_2504 dcae9930423b19697d5ca87a9321422d 375 Pfam PF01556 DnaJ C terminal domain 120 332 7.3E-43 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal Atc_2504 dcae9930423b19697d5ca87a9321422d 375 Gene3D G3DSA:2.10.230.10 146 206 5.3E-37 T 13-10-2018 Atc_2504 dcae9930423b19697d5ca87a9321422d 375 SUPERFAMILY SSF49493 114 265 4.32E-20 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Atc_2551 db35703449beb39fbda6d069358e7d45 486 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 14 473 2.6E-138 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Atc_2551 db35703449beb39fbda6d069358e7d45 486 Pfam PF00361 Proton-conducting membrane transporter 131 419 3.2E-71 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2551 db35703449beb39fbda6d069358e7d45 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 2.3E-10 T 13-10-2018 Atc_2551 db35703449beb39fbda6d069358e7d45 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 2.3E-10 T 13-10-2018 Atc_2551 db35703449beb39fbda6d069358e7d45 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 2.3E-10 T 13-10-2018 Atc_2551 db35703449beb39fbda6d069358e7d45 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 2.3E-10 T 13-10-2018 Atc_2551 db35703449beb39fbda6d069358e7d45 486 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 11 475 18.101 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Atc_0615 1c770fa170b9b321ba60f28f24f47e1b 122 SUPERFAMILY SSF50193 1 122 6.28E-52 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Atc_0615 1c770fa170b9b321ba60f28f24f47e1b 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 9.3E-58 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Atc_0615 1c770fa170b9b321ba60f28f24f47e1b 122 Gene3D G3DSA:2.40.150.20 1 122 8.7E-54 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Atc_0615 1c770fa170b9b321ba60f28f24f47e1b 122 SMART SM01374 1 122 2.5E-85 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Atc_0615 1c770fa170b9b321ba60f28f24f47e1b 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.093 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Atc_0615 1c770fa170b9b321ba60f28f24f47e1b 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0615 1c770fa170b9b321ba60f28f24f47e1b 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.4E-54 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Atc_0563 888825c05f570653c21bd1fe0622b23c 118 Pfam PF12732 YtxH-like protein 18 90 1.2E-14 T 13-10-2018 IPR024623 Uncharacterised protein family YtxH Atc_0310 f3a5e20ac02f0ea042bc99fc3673b4c8 441 Gene3D G3DSA:3.30.360.10 139 351 4.0E-164 T 13-10-2018 Atc_0310 f3a5e20ac02f0ea042bc99fc3673b4c8 441 PIRSF PIRSF000098 5 437 5.5E-156 T 13-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Atc_0310 f3a5e20ac02f0ea042bc99fc3673b4c8 441 Gene3D G3DSA:3.40.50.720 8 343 4.0E-164 T 13-10-2018 Atc_0310 f3a5e20ac02f0ea042bc99fc3673b4c8 441 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 14 132 2.8E-18 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Atc_0310 f3a5e20ac02f0ea042bc99fc3673b4c8 441 SUPERFAMILY SSF55347 140 305 1.11E-51 T 13-10-2018 Atc_0310 f3a5e20ac02f0ea042bc99fc3673b4c8 441 Pfam PF00742 Homoserine dehydrogenase 140 318 3.3E-63 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Atc_0310 f3a5e20ac02f0ea042bc99fc3673b4c8 441 SUPERFAMILY SSF51735 6 161 7.1E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0310 f3a5e20ac02f0ea042bc99fc3673b4c8 441 SUPERFAMILY SSF55021 355 422 2.34E-11 T 13-10-2018 Atc_0310 f3a5e20ac02f0ea042bc99fc3673b4c8 441 Pfam PF01842 ACT domain 357 421 5.0E-12 T 13-10-2018 IPR002912 ACT domain Atc_0310 f3a5e20ac02f0ea042bc99fc3673b4c8 441 Gene3D G3DSA:3.30.70.260 352 425 4.0E-164 T 13-10-2018 Atc_0310 f3a5e20ac02f0ea042bc99fc3673b4c8 441 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 186 208 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Atc_1741 7cbde3b073dc4bc034cb520c918f2625 163 Gene3D G3DSA:3.40.1260.10 43 162 2.8E-22 T 13-10-2018 IPR027396 DsrEFH-like Atc_1741 7cbde3b073dc4bc034cb520c918f2625 163 SUPERFAMILY SSF75169 45 162 3.34E-21 T 13-10-2018 IPR027396 DsrEFH-like Atc_1741 7cbde3b073dc4bc034cb520c918f2625 163 Pfam PF02635 DsrE/DsrF-like family 74 162 1.7E-10 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_0344 e25ee45b1aea8d623a9b35fba451b8e6 363 Gene3D G3DSA:2.40.30.170 62 289 9.8E-35 T 13-10-2018 Atc_0344 e25ee45b1aea8d623a9b35fba451b8e6 363 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 242 2.2E-15 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_0344 e25ee45b1aea8d623a9b35fba451b8e6 363 Gene3D G3DSA:2.40.420.20 53 346 9.8E-35 T 13-10-2018 Atc_0344 e25ee45b1aea8d623a9b35fba451b8e6 363 Gene3D G3DSA:2.40.50.100 76 215 9.8E-35 T 13-10-2018 Atc_0344 e25ee45b1aea8d623a9b35fba451b8e6 363 Gene3D G3DSA:1.10.287.470 110 180 9.8E-35 T 13-10-2018 Atc_0107 3e99852a9324233dd0893dccbbe32724 318 Pfam PF01609 Transposase DDE domain 143 308 6.3E-25 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0107 3e99852a9324233dd0893dccbbe32724 318 Pfam PF05598 Transposase domain (DUF772) 52 127 9.3E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0147 3e99852a9324233dd0893dccbbe32724 318 Pfam PF01609 Transposase DDE domain 143 308 6.3E-25 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0147 3e99852a9324233dd0893dccbbe32724 318 Pfam PF05598 Transposase domain (DUF772) 52 127 9.3E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_2287 0840dd09a017c08ed5c8f7ffec93cf5a 620 Pfam PF13667 ThiC-associated domain 21 92 1.2E-19 T 13-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Atc_2287 0840dd09a017c08ed5c8f7ffec93cf5a 620 Gene3D G3DSA:3.20.20.540 214 526 4.5E-152 T 13-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Atc_2287 0840dd09a017c08ed5c8f7ffec93cf5a 620 Pfam PF01964 Radical SAM ThiC family 141 590 2.0E-199 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Atc_2287 0840dd09a017c08ed5c8f7ffec93cf5a 620 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 140 593 3.6E-214 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Atc_2287 0840dd09a017c08ed5c8f7ffec93cf5a 620 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 140 595 99.236 T 13-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Atc_2341 9e7526a7ef8c0bd57e4b024dc64e063f 351 Gene3D G3DSA:3.50.50.60 2 336 3.2E-65 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2341 9e7526a7ef8c0bd57e4b024dc64e063f 351 Pfam PF01494 FAD binding domain 92 156 2.9E-7 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 Atc_2341 9e7526a7ef8c0bd57e4b024dc64e063f 351 Pfam PF12831 FAD dependent oxidoreductase 6 40 1.2E-6 T 13-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal Atc_2341 9e7526a7ef8c0bd57e4b024dc64e063f 351 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 5 287 3.5E-58 T 13-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 Atc_2341 9e7526a7ef8c0bd57e4b024dc64e063f 351 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 252 267 3.1E-14 T 13-10-2018 Atc_2341 9e7526a7ef8c0bd57e4b024dc64e063f 351 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.1E-14 T 13-10-2018 Atc_2341 9e7526a7ef8c0bd57e4b024dc64e063f 351 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 135 150 3.1E-14 T 13-10-2018 Atc_2341 9e7526a7ef8c0bd57e4b024dc64e063f 351 SUPERFAMILY SSF51905 5 310 1.03E-36 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2341 9e7526a7ef8c0bd57e4b024dc64e063f 351 Pfam PF05834 Lycopene cyclase protein 218 297 6.0E-7 T 13-10-2018 Atc_m040 542bf7bdd7578adc68b029ca462214a2 167 Gene3D G3DSA:3.40.470.10 1 161 2.1E-33 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_m040 542bf7bdd7578adc68b029ca462214a2 167 SMART SM00987 1 152 2.2E-9 T 13-10-2018 Atc_m040 542bf7bdd7578adc68b029ca462214a2 167 SMART SM00986 1 152 2.2E-9 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_m040 542bf7bdd7578adc68b029ca462214a2 167 Pfam PF03167 Uracil DNA glycosylase superfamily 1 139 3.1E-28 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_m040 542bf7bdd7578adc68b029ca462214a2 167 SUPERFAMILY SSF52141 1 141 1.93E-30 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_2535 74d97e15300c4ad9833d3e1a3b575883 248 SUPERFAMILY SSF51351 1 242 4.32E-80 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_2535 74d97e15300c4ad9833d3e1a3b575883 248 Pfam PF00121 Triosephosphate isomerase 2 238 5.7E-79 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_2535 74d97e15300c4ad9833d3e1a3b575883 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 21 231 1.4E-48 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_2535 74d97e15300c4ad9833d3e1a3b575883 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 240 51.365 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_2535 74d97e15300c4ad9833d3e1a3b575883 248 Gene3D G3DSA:3.20.20.70 1 246 4.6E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2535 74d97e15300c4ad9833d3e1a3b575883 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 157 167 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atc_1322 2e6cc697c2b1a5db443c13bcdfc89740 2005 SMART SM01360 1278 1372 6.2E-22 T 13-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 Atc_1322 2e6cc697c2b1a5db443c13bcdfc89740 2005 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 597 701 2.9E-22 T 13-10-2018 Atc_1322 2e6cc697c2b1a5db443c13bcdfc89740 2005 SMART SM01359 1074 1213 2.7E-34 T 13-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 Atc_1322 2e6cc697c2b1a5db443c13bcdfc89740 2005 Gene3D G3DSA:2.60.40.1930 709 812 6.9E-5 T 13-10-2018 Atc_1322 2e6cc697c2b1a5db443c13bcdfc89740 2005 SUPERFAMILY SSF48239 1483 1681 9.42E-18 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Atc_1322 2e6cc697c2b1a5db443c13bcdfc89740 2005 Pfam PF01835 MG2 domain 711 808 1.6E-18 T 13-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 Atc_1322 2e6cc697c2b1a5db443c13bcdfc89740 2005 Gene3D G3DSA:1.50.10.20 1479 1745 3.4E-14 T 13-10-2018 Atc_1322 2e6cc697c2b1a5db443c13bcdfc89740 2005 Pfam PF00207 Alpha-2-macroglobulin family 1280 1358 1.3E-12 T 13-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 Atc_1322 2e6cc697c2b1a5db443c13bcdfc89740 2005 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1074 1212 4.9E-14 T 13-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 Atc_0819 0babc5b336606e8e498ec1e6ceb5c8a1 101 Gene3D G3DSA:3.30.300.90 1 89 6.8E-23 T 13-10-2018 Atc_0819 0babc5b336606e8e498ec1e6ceb5c8a1 101 PIRSF PIRSF003113 1 98 6.5E-22 T 13-10-2018 IPR002634 BolA protein Atc_0819 0babc5b336606e8e498ec1e6ceb5c8a1 101 Pfam PF01722 BolA-like protein 10 83 3.2E-22 T 13-10-2018 IPR002634 BolA protein Atc_0819 0babc5b336606e8e498ec1e6ceb5c8a1 101 SUPERFAMILY SSF82657 3 86 1.7E-21 T 13-10-2018 IPR036065 BolA-like superfamily Atc_0525 5a39dbbe3550c662d20682d3978a3e32 554 Pfam PF03065 Glycosyl hydrolase family 57 1 455 1.6E-65 T 13-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Atc_0525 5a39dbbe3550c662d20682d3978a3e32 554 SUPERFAMILY SSF88713 1 443 2.0E-78 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atc_0525 5a39dbbe3550c662d20682d3978a3e32 554 Gene3D G3DSA:3.20.110.20 173 469 4.9E-15 T 13-10-2018 Atc_1809 ad3ef551939535b0a21a19cabd2d2f83 260 Pfam PF12840 Helix-turn-helix domain 44 97 1.2E-9 T 13-10-2018 Atc_1809 ad3ef551939535b0a21a19cabd2d2f83 260 Gene3D G3DSA:1.10.10.10 22 125 7.9E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1809 ad3ef551939535b0a21a19cabd2d2f83 260 SMART SM00418 41 120 9.8E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1809 ad3ef551939535b0a21a19cabd2d2f83 260 SUPERFAMILY SSF46785 32 120 2.31E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1328 16fd6121ee25915c84e8f91b73f64970 118 Pfam PF02627 Carboxymuconolactone decarboxylase family 27 105 1.7E-18 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atc_1328 16fd6121ee25915c84e8f91b73f64970 118 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 84 5.9E-13 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atc_1328 16fd6121ee25915c84e8f91b73f64970 118 SUPERFAMILY SSF69118 7 107 3.53E-25 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atc_1328 16fd6121ee25915c84e8f91b73f64970 118 Gene3D G3DSA:1.20.1290.10 2 114 3.4E-29 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atc_1766 3cbeeca43d0466602bd9c6f602c2240f 580 SUPERFAMILY SSF52518 16 199 7.99E-65 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_1766 3cbeeca43d0466602bd9c6f602c2240f 580 SUPERFAMILY SSF52467 201 375 4.62E-64 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Atc_1766 3cbeeca43d0466602bd9c6f602c2240f 580 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 209 343 8.0E-44 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Atc_1766 3cbeeca43d0466602bd9c6f602c2240f 580 Gene3D G3DSA:3.40.50.1220 203 373 1.1E-59 T 13-10-2018 Atc_1766 3cbeeca43d0466602bd9c6f602c2240f 580 SUPERFAMILY SSF52518 385 578 1.68E-71 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_1766 3cbeeca43d0466602bd9c6f602c2240f 580 Gene3D G3DSA:3.40.50.970 377 579 4.4E-69 T 13-10-2018 Atc_1766 3cbeeca43d0466602bd9c6f602c2240f 580 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 20 578 1.7E-256 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Atc_1766 3cbeeca43d0466602bd9c6f602c2240f 580 Gene3D G3DSA:3.40.50.970 11 200 9.6E-71 T 13-10-2018 Atc_1766 3cbeeca43d0466602bd9c6f602c2240f 580 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 407 555 2.4E-50 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Atc_1766 3cbeeca43d0466602bd9c6f602c2240f 580 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 20 183 2.3E-57 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Atc_0314 a77a5c67224c50ac06637a414a4b70cd 349 Gene3D G3DSA:3.30.160.20 210 305 1.2E-97 T 13-10-2018 Atc_0314 a77a5c67224c50ac06637a414a4b70cd 349 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 347 3.9E-155 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Atc_0314 a77a5c67224c50ac06637a414a4b70cd 349 SMART SM00937 69 179 7.8E-52 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Atc_0314 a77a5c67224c50ac06637a414a4b70cd 349 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 229 245 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Atc_0314 a77a5c67224c50ac06637a414a4b70cd 349 Gene3D G3DSA:1.20.58.410 2 100 6.2E-26 T 13-10-2018 Atc_0314 a77a5c67224c50ac06637a414a4b70cd 349 SUPERFAMILY SSF75620 16 346 2.22E-130 T 13-10-2018 Atc_0314 a77a5c67224c50ac06637a414a4b70cd 349 Gene3D G3DSA:3.30.70.1660 114 342 1.2E-97 T 13-10-2018 Atc_0314 a77a5c67224c50ac06637a414a4b70cd 349 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 349 38.315 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Atc_0314 a77a5c67224c50ac06637a414a4b70cd 349 Pfam PF03462 PCRF domain 15 204 4.6E-57 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Atc_0314 a77a5c67224c50ac06637a414a4b70cd 349 Pfam PF00472 RF-1 domain 213 321 5.0E-43 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Atc_1817 cea603a9f7289c9d4aec76618025b6e0 351 Pfam PF01609 Transposase DDE domain 144 342 3.8E-14 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1817 cea603a9f7289c9d4aec76618025b6e0 351 Pfam PF05598 Transposase domain (DUF772) 53 127 5.4E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0949 7a3b4b0295f793f597a4ab4d69e4896c 326 Gene3D G3DSA:3.20.20.70 151 326 2.8E-43 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0949 7a3b4b0295f793f597a4ab4d69e4896c 326 SUPERFAMILY SSF51395 27 321 1.6E-57 T 13-10-2018 Atc_0949 7a3b4b0295f793f597a4ab4d69e4896c 326 Pfam PF01645 Conserved region in glutamate synthase 162 322 9.2E-31 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Atc_1782 fec30010e535e3de4fa43024655259c2 353 Gene3D G3DSA:3.20.20.210 1 352 8.9E-155 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Atc_1782 fec30010e535e3de4fa43024655259c2 353 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 24 33 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Atc_1782 fec30010e535e3de4fa43024655259c2 353 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 11 350 1.5E-137 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Atc_1782 fec30010e535e3de4fa43024655259c2 353 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 8 352 51.473 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Atc_1782 fec30010e535e3de4fa43024655259c2 353 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 7 351 1.1E-139 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Atc_1782 fec30010e535e3de4fa43024655259c2 353 SUPERFAMILY SSF51726 6 352 4.84E-119 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Atc_1782 fec30010e535e3de4fa43024655259c2 353 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 144 160 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Atc_2559 bd414007ca287219620d4b85cb318366 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 2.9E-13 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2559 bd414007ca287219620d4b85cb318366 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 2.9E-13 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2559 bd414007ca287219620d4b85cb318366 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 2.9E-13 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2559 bd414007ca287219620d4b85cb318366 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 27.928 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Atc_2559 bd414007ca287219620d4b85cb318366 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 1.1E-39 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Atc_2559 bd414007ca287219620d4b85cb318366 99 SMART SM00411 3 92 6.1E-39 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2559 bd414007ca287219620d4b85cb318366 99 Gene3D G3DSA:4.10.520.10 1 98 5.9E-35 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_2559 bd414007ca287219620d4b85cb318366 99 Pfam PF00216 Bacterial DNA-binding protein 3 92 1.2E-30 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2559 bd414007ca287219620d4b85cb318366 99 SUPERFAMILY SSF47729 3 94 1.25E-31 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_2559 bd414007ca287219620d4b85cb318366 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Atc_1006 3de041020a323fa06389f1b8ac8192ed 345 SUPERFAMILY SSF56042 171 338 3.29E-53 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atc_1006 3de041020a323fa06389f1b8ac8192ed 345 Gene3D G3DSA:3.30.1330.10 7 170 3.5E-68 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atc_1006 3de041020a323fa06389f1b8ac8192ed 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 1.3E-132 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_1006 3de041020a323fa06389f1b8ac8192ed 345 SUPERFAMILY SSF55326 7 169 2.84E-51 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atc_1006 3de041020a323fa06389f1b8ac8192ed 345 Gene3D G3DSA:3.90.650.10 171 343 3.5E-59 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atc_1006 3de041020a323fa06389f1b8ac8192ed 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 44.934 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atc_1006 3de041020a323fa06389f1b8ac8192ed 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 340 8.5E-32 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Atc_1006 3de041020a323fa06389f1b8ac8192ed 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 164 2.1E-16 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Atc_1524 fd8c7f1b153d1584ff72f8d003aa252d 619 PRINTS PR00762 Chloride channel signature 109 126 3.5E-20 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1524 fd8c7f1b153d1584ff72f8d003aa252d 619 PRINTS PR00762 Chloride channel signature 364 384 3.5E-20 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1524 fd8c7f1b153d1584ff72f8d003aa252d 619 PRINTS PR00762 Chloride channel signature 399 415 3.5E-20 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1524 fd8c7f1b153d1584ff72f8d003aa252d 619 PRINTS PR00762 Chloride channel signature 189 208 3.5E-20 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1524 fd8c7f1b153d1584ff72f8d003aa252d 619 PRINTS PR00762 Chloride channel signature 417 436 3.5E-20 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1524 fd8c7f1b153d1584ff72f8d003aa252d 619 SUPERFAMILY SSF81340 22 467 7.59E-102 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Atc_1524 fd8c7f1b153d1584ff72f8d003aa252d 619 Pfam PF00654 Voltage gated chloride channel 95 447 6.8E-88 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atc_1524 fd8c7f1b153d1584ff72f8d003aa252d 619 Gene3D G3DSA:1.10.3080.10 21 467 5.7E-109 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Atc_1461 864f164f5e49bf39172b52189714c934 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 5.3E-54 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Atc_1461 864f164f5e49bf39172b52189714c934 138 Pfam PF00460 Flagella basal body rod protein 7 32 1.2E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Atc_1461 864f164f5e49bf39172b52189714c934 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 90 136 7.5E-15 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Atc_1461 864f164f5e49bf39172b52189714c934 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Atc_0611 52f9423add2336807abdf1f4a2b1ab93 220 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 1.0E-40 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0611 52f9423add2336807abdf1f4a2b1ab93 220 Gene3D G3DSA:3.30.300.20 17 106 4.5E-27 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Atc_0611 52f9423add2336807abdf1f4a2b1ab93 220 Pfam PF07650 KH domain 38 110 1.0E-19 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0611 52f9423add2336807abdf1f4a2b1ab93 220 SUPERFAMILY SSF54814 2 105 5.49E-36 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Atc_0611 52f9423add2336807abdf1f4a2b1ab93 220 SUPERFAMILY SSF54821 107 205 8.76E-41 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0611 52f9423add2336807abdf1f4a2b1ab93 220 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 5.2E-93 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Atc_0611 52f9423add2336807abdf1f4a2b1ab93 220 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0611 52f9423add2336807abdf1f4a2b1ab93 220 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.953 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Atc_0611 52f9423add2336807abdf1f4a2b1ab93 220 Gene3D G3DSA:3.30.1140.32 107 207 1.8E-45 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0611 52f9423add2336807abdf1f4a2b1ab93 220 SMART SM00322 59 124 2.4E-9 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Atc_0169 0fac47f8bc1454cce4d9fd171ed4a849 169 SUPERFAMILY SSF53955 1 124 1.62E-10 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_0169 0fac47f8bc1454cce4d9fd171ed4a849 169 Pfam PF01464 Transglycosylase SLT domain 2 112 1.1E-8 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_0169 0fac47f8bc1454cce4d9fd171ed4a849 169 Gene3D G3DSA:1.10.530.10 1 128 1.6E-6 T 13-10-2018 Atc_2007 a7d6caa3b9de7e93cdefa9d7750d5df2 796 Gene3D G3DSA:3.40.50.300 184 421 4.2E-35 T 13-10-2018 Atc_2007 a7d6caa3b9de7e93cdefa9d7750d5df2 796 SUPERFAMILY SSF52540 305 720 2.89E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2007 a7d6caa3b9de7e93cdefa9d7750d5df2 796 SMART SM00487 247 430 7.6E-17 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_2007 a7d6caa3b9de7e93cdefa9d7750d5df2 796 SMART SM00490 618 701 2.2E-17 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_2007 a7d6caa3b9de7e93cdefa9d7750d5df2 796 Pfam PF17191 RecG wedge domain 26 139 1.1E-6 T 13-10-2018 IPR033454 RecG, wedge domain Atc_2007 a7d6caa3b9de7e93cdefa9d7750d5df2 796 SUPERFAMILY SSF50249 25 142 6.68E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_2007 a7d6caa3b9de7e93cdefa9d7750d5df2 796 Gene3D G3DSA:2.40.50.140 36 129 9.5E-12 T 13-10-2018 Atc_2007 a7d6caa3b9de7e93cdefa9d7750d5df2 796 Pfam PF00271 Helicase conserved C-terminal domain 630 701 2.3E-14 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_2007 a7d6caa3b9de7e93cdefa9d7750d5df2 796 Gene3D G3DSA:3.40.50.300 585 777 3.8E-35 T 13-10-2018 Atc_2007 a7d6caa3b9de7e93cdefa9d7750d5df2 796 Pfam PF00270 DEAD/DEAH box helicase 270 387 5.9E-12 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atc_0944 7cec10ef76326cb61c807dcd0db662f3 204 SUPERFAMILY SSF143414 138 200 1.44E-9 T 13-10-2018 IPR037233 CcmK-like superfamily Atc_0944 7cec10ef76326cb61c807dcd0db662f3 204 SMART SM00877 138 201 1.1E-12 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Atc_0944 7cec10ef76326cb61c807dcd0db662f3 204 Gene3D G3DSA:3.30.70.1810 104 202 1.2E-34 T 13-10-2018 Atc_0944 7cec10ef76326cb61c807dcd0db662f3 204 Pfam PF00936 BMC domain 142 198 2.9E-7 T 13-10-2018 IPR000249 Microcompartment protein, bacteria Atc_0944 7cec10ef76326cb61c807dcd0db662f3 204 Gene3D G3DSA:3.30.70.1810 2 103 6.1E-42 T 13-10-2018 Atc_2874 2697d06c3c612ea30af20f0da3b6bd8c 156 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 140 5.0E-49 T 13-10-2018 Atc_2874 2697d06c3c612ea30af20f0da3b6bd8c 156 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 156 67.711 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atc_2874 2697d06c3c612ea30af20f0da3b6bd8c 156 SUPERFAMILY SSF52304 6 149 3.92E-58 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atc_2874 2697d06c3c612ea30af20f0da3b6bd8c 156 PIRSF PIRSF001399 3 149 3.5E-56 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atc_2874 2697d06c3c612ea30af20f0da3b6bd8c 156 Pfam PF01220 Dehydroquinase class II 7 143 1.0E-56 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atc_2874 2697d06c3c612ea30af20f0da3b6bd8c 156 Gene3D G3DSA:3.40.50.9100 1 151 1.2E-60 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atc_2874 2697d06c3c612ea30af20f0da3b6bd8c 156 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 3.3E-57 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atc_2874 2697d06c3c612ea30af20f0da3b6bd8c 156 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 13-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atc_1807 a2cee93a607e9f37b65db861e8c080e5 164 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 37 84 5.5E-13 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atc_1807 a2cee93a607e9f37b65db861e8c080e5 164 SUPERFAMILY SSF69118 16 152 9.52E-39 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atc_1807 a2cee93a607e9f37b65db861e8c080e5 164 Pfam PF02627 Carboxymuconolactone decarboxylase family 19 100 2.1E-18 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atc_1807 a2cee93a607e9f37b65db861e8c080e5 164 Gene3D G3DSA:1.20.1290.10 9 154 7.4E-42 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atc_m098 24664d29712fa39dbaa060757a757ffe 508 Pfam PF15978 Tn7-like transposition protein D 199 306 2.6E-9 T 13-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl Atc_m098 24664d29712fa39dbaa060757a757ffe 508 Pfam PF15978 Tn7-like transposition protein D 330 444 1.4E-16 T 13-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl Atc_m098 24664d29712fa39dbaa060757a757ffe 508 Pfam PF06527 TniQ 4 154 5.0E-20 T 13-10-2018 IPR009492 TniQ Atc_1425 c6fa7de79abbecba93a47c8c5525d5a2 113 PIRSF PIRSF006821 1 110 1.8E-44 T 13-10-2018 IPR018685 Protein of unknown function DUF2173 Atc_1425 c6fa7de79abbecba93a47c8c5525d5a2 113 Pfam PF09941 Uncharacterized conserved protein (DUF2173) 5 107 1.5E-39 T 13-10-2018 IPR018685 Protein of unknown function DUF2173 Atc_0674 2542964b40fcffaf1f31888a01fa0144 247 Gene3D G3DSA:3.40.50.2300 2 119 4.9E-34 T 13-10-2018 Atc_0674 2542964b40fcffaf1f31888a01fa0144 247 Gene3D G3DSA:1.10.10.10 120 229 1.3E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0674 2542964b40fcffaf1f31888a01fa0144 247 Pfam PF00072 Response regulator receiver domain 4 113 7.4E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0674 2542964b40fcffaf1f31888a01fa0144 247 SUPERFAMILY SSF52172 4 173 9.36E-37 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0674 2542964b40fcffaf1f31888a01fa0144 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 223 8.0E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_0674 2542964b40fcffaf1f31888a01fa0144 247 SMART SM00862 147 223 4.7E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_0674 2542964b40fcffaf1f31888a01fa0144 247 SMART SM00448 2 113 3.0E-42 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 Gene3D G3DSA:3.30.390.30 320 394 2.7E-6 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 10 796 3.4E-275 T 13-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 SUPERFAMILY SSF51905 7 193 1.99E-41 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 625 8.2E-13 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 PIRSF PIRSF037149 2 805 0.0 T 13-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 Gene3D G3DSA:3.30.413.10 632 797 1.1E-40 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 Gene3D G3DSA:1.10.10.1100 424 476 2.3E-11 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 SUPERFAMILY SSF56014 634 797 2.49E-52 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 Gene3D G3DSA:3.90.480.10 544 630 1.2E-5 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 284 2.2E-50 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 1.3E-8 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.3E-8 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 1.3E-8 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 3.8E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 3.8E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 5.2E-16 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 5.2E-16 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 5.2E-16 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.2E-16 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 5.2E-16 T 13-10-2018 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 SUPERFAMILY SSF55124 521 629 1.8E-21 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 772 3.1E-31 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 SUPERFAMILY SSF51905 152 311 1.62E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 Gene3D G3DSA:3.50.50.60 119 243 5.1E-86 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 Pfam PF04324 BFD-like [2Fe-2S] binding domain 425 471 9.9E-13 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 Pfam PF04324 BFD-like [2Fe-2S] binding domain 489 537 1.5E-12 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Atc_1126 d1b9397c3c7f75f285762f4586aaa086 815 Gene3D G3DSA:3.50.50.60 11 307 5.1E-86 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2014 03c6abdea7b9d73b3b287b4ab68606f1 117 Pfam PF01695 IstB-like ATP binding protein 2 96 8.0E-10 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_2014 03c6abdea7b9d73b3b287b4ab68606f1 117 Gene3D G3DSA:3.40.50.300 1 115 2.1E-20 T 13-10-2018 Atc_m223 739332d93f2a26517315e687ff1c47d6 192 Pfam PF00665 Integrase core domain 1 105 1.1E-22 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_m223 739332d93f2a26517315e687ff1c47d6 192 SUPERFAMILY SSF53098 1 152 1.97E-39 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_m223 739332d93f2a26517315e687ff1c47d6 192 Gene3D G3DSA:3.30.420.10 4 186 5.6E-11 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_0221 f51959127fd312c5e3f110ca71ab2b66 122 SUPERFAMILY SSF46785 3 106 1.3E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0221 f51959127fd312c5e3f110ca71ab2b66 122 TIGRFAM TIGR04176 MarR_EPS: EPS-associated transcriptional regulator, MarR family 4 106 2.0E-42 T 13-10-2018 IPR026433 EPS-associated transcriptional regulator, MarR family Atc_0221 f51959127fd312c5e3f110ca71ab2b66 122 Gene3D G3DSA:1.10.10.10 5 115 4.5E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0221 f51959127fd312c5e3f110ca71ab2b66 122 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 1.7E-10 T 13-10-2018 Atc_2662 6fd675bf4c38f89bfb5bca55a3672247 292 SUPERFAMILY SSF56176 4 177 1.27E-33 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atc_2662 6fd675bf4c38f89bfb5bca55a3672247 292 SUPERFAMILY SSF56194 188 288 4.05E-34 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2662 6fd675bf4c38f89bfb5bca55a3672247 292 Gene3D G3DSA:3.30.465.10 80 203 8.1E-30 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atc_2662 6fd675bf4c38f89bfb5bca55a3672247 292 Gene3D G3DSA:3.90.78.10 204 292 1.2E-33 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2662 6fd675bf4c38f89bfb5bca55a3672247 292 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 12 287 3.8E-56 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2662 6fd675bf4c38f89bfb5bca55a3672247 292 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 292 84.089 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2662 6fd675bf4c38f89bfb5bca55a3672247 292 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 188 286 8.7E-29 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2662 6fd675bf4c38f89bfb5bca55a3672247 292 Gene3D G3DSA:3.30.43.10 1 73 2.2E-18 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Atc_2662 6fd675bf4c38f89bfb5bca55a3672247 292 Pfam PF01565 FAD binding domain 26 153 2.6E-15 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Atc_m114 9287e9d3a42f52e5af1ec5a7cbc8dac9 70 Gene3D G3DSA:1.20.5.170 1 68 1.9E-5 T 13-10-2018 Atc_1787 b308cf17ca1c928fc7a7d4829ec1bba0 291 SMART SM00244 22 188 9.3E-7 T 13-10-2018 IPR001107 Band 7 domain Atc_1787 b308cf17ca1c928fc7a7d4829ec1bba0 291 SUPERFAMILY SSF117892 54 186 1.31E-5 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily Atc_1787 b308cf17ca1c928fc7a7d4829ec1bba0 291 PIRSF PIRSF005651 4 291 5.1E-61 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Atc_1787 b308cf17ca1c928fc7a7d4829ec1bba0 291 Pfam PF01145 SPFH domain / Band 7 family 28 211 3.0E-16 T 13-10-2018 IPR001107 Band 7 domain Atc_2430 d003cbccaf1eb82ed123f7fafd35fe6d 404 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 321 401 2.8E-12 T 13-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_2430 d003cbccaf1eb82ed123f7fafd35fe6d 404 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 129 295 2.0E-25 T 13-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_2430 d003cbccaf1eb82ed123f7fafd35fe6d 404 SUPERFAMILY SSF51649 123 402 1.16E-72 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_2430 d003cbccaf1eb82ed123f7fafd35fe6d 404 SUPERFAMILY SSF54966 11 119 1.55E-17 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_2430 d003cbccaf1eb82ed123f7fafd35fe6d 404 Gene3D G3DSA:3.30.70.150 13 121 1.2E-13 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_2430 d003cbccaf1eb82ed123f7fafd35fe6d 404 Gene3D G3DSA:3.20.20.110 122 403 1.6E-78 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0418 ed8f9141af26172b9c9124cd7383389f 420 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 407 8.2E-139 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atc_0418 ed8f9141af26172b9c9124cd7383389f 420 PIRSF PIRSF000151 1 420 3.7E-169 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Atc_0418 ed8f9141af26172b9c9124cd7383389f 420 SUPERFAMILY SSF53720 7 419 2.49E-117 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atc_0418 ed8f9141af26172b9c9124cd7383389f 420 Pfam PF00171 Aldehyde dehydrogenase family 6 286 3.2E-18 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atc_0418 ed8f9141af26172b9c9124cd7383389f 420 Gene3D G3DSA:3.40.309.10 229 377 1.4E-156 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atc_0418 ed8f9141af26172b9c9124cd7383389f 420 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 419 41.051 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atc_0418 ed8f9141af26172b9c9124cd7383389f 420 Gene3D G3DSA:3.40.605.10 27 414 1.4E-156 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atc_0418 ed8f9141af26172b9c9124cd7383389f 420 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 326 347 - T 13-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atc_m141 f98ade77ff59f3e1015f165676acc170 181 Pfam PF00436 Single-strand binding protein family 4 106 3.4E-39 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Atc_m141 f98ade77ff59f3e1015f165676acc170 181 Gene3D G3DSA:2.40.50.140 1 124 2.5E-45 T 13-10-2018 Atc_m141 f98ade77ff59f3e1015f165676acc170 181 SUPERFAMILY SSF50249 3 159 2.64E-51 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_m141 f98ade77ff59f3e1015f165676acc170 181 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 159 3.4E-51 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Atc_m141 f98ade77ff59f3e1015f165676acc170 181 Hamap MF_00984 Single-stranded DNA-binding protein. 4 111 35.268 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 SMART SM00487 593 789 1.1E-35 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 SUPERFAMILY SSF52540 775 983 1.07E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Pfam PF00270 DEAD/DEAH box helicase 598 757 5.4E-18 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Pfam PF03461 TRCF domain 1003 1096 3.7E-24 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 SUPERFAMILY SSF141259 462 541 6.67E-17 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 SMART SM01058 471 569 2.9E-35 T 13-10-2018 IPR003711 CarD-like/TRCF domain Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Gene3D G3DSA:3.90.1150.50 999 1142 8.5E-36 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Pfam PF02559 CarD-like/TRCF domain 472 568 2.3E-23 T 13-10-2018 IPR003711 CarD-like/TRCF domain Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 SMART SM00982 1002 1102 4.9E-34 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Gene3D G3DSA:3.40.50.11140 344 444 7.2E-6 T 13-10-2018 Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 25 1103 27.322 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 140 1075 0.0 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Gene3D G3DSA:3.40.50.11180 18 325 4.3E-96 T 13-10-2018 Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 SUPERFAMILY SSF52540 347 455 1.06E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 SMART SM00490 819 903 1.4E-13 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Gene3D G3DSA:3.30.2060.10 123 208 4.3E-96 T 13-10-2018 Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Pfam PF00271 Helicase conserved C-terminal domain 799 902 1.8E-13 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 SUPERFAMILY SSF52540 13 329 1.56E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Gene3D G3DSA:3.40.50.300 471 982 9.6E-227 T 13-10-2018 Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 SUPERFAMILY SSF52540 518 776 8.02E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Gene3D G3DSA:2.30.30.840 475 534 9.6E-227 T 13-10-2018 Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 SUPERFAMILY SSF143517 996 1139 3.53E-34 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain Atc_2486 fac980f63cbd8f8bd56ca57030b83d27 1143 Gene3D G3DSA:3.40.50.300 535 774 9.6E-227 T 13-10-2018 Atc_0970 b7da7686447e00fc38b90639616af954 335 Gene3D G3DSA:3.40.50.150 100 335 2.1E-31 T 13-10-2018 Atc_0970 b7da7686447e00fc38b90639616af954 335 Pfam PF13649 Methyltransferase domain 169 264 7.1E-13 T 13-10-2018 Atc_0970 b7da7686447e00fc38b90639616af954 335 SUPERFAMILY SSF53335 165 318 9.34E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0970 b7da7686447e00fc38b90639616af954 335 SUPERFAMILY SSF46785 9 85 3.24E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0970 b7da7686447e00fc38b90639616af954 335 Gene3D G3DSA:1.10.10.10 7 82 1.0E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 PIRSF PIRSF001365 1 294 3.8E-93 T 13-10-2018 IPR002220 DapA-like GO:0016829 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 SUPERFAMILY SSF51569 2 288 8.58E-103 T 13-10-2018 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.3E-33 T 13-10-2018 IPR002220 DapA-like GO:0016829 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.3E-33 T 13-10-2018 IPR002220 DapA-like GO:0016829 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.3E-33 T 13-10-2018 IPR002220 DapA-like GO:0016829 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.3E-33 T 13-10-2018 IPR002220 DapA-like GO:0016829 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 288 2.0E-106 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 Pfam PF00701 Dihydrodipicolinate synthetase family 2 290 7.9E-98 T 13-10-2018 IPR002220 DapA-like GO:0016829 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 Gene3D G3DSA:3.20.20.70 1 294 4.4E-110 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 290 66.316 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atc_2202 879bfea12f8098e3594edee51a13d3f0 304 SMART SM01130 1 292 1.5E-139 T 13-10-2018 IPR002220 DapA-like GO:0016829 Atc_2609 ad944440a706a5c62867ff9e4a265b94 115 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 14 83 1.0E-19 T 13-10-2018 IPR003746 Protein of unknown function DUF167 Atc_2609 ad944440a706a5c62867ff9e4a265b94 115 Hamap MF_00634 UPF0235 protein YggU [yggU]. 10 99 15.634 T 13-10-2018 IPR003746 Protein of unknown function DUF167 Atc_2609 ad944440a706a5c62867ff9e4a265b94 115 SUPERFAMILY SSF69786 12 97 1.16E-21 T 13-10-2018 IPR036591 YggU-like superfamily Atc_2609 ad944440a706a5c62867ff9e4a265b94 115 Gene3D G3DSA:3.30.1200.10 8 103 8.0E-22 T 13-10-2018 IPR036591 YggU-like superfamily Atc_2609 ad944440a706a5c62867ff9e4a265b94 115 SMART SM01152 11 85 8.1E-24 T 13-10-2018 IPR003746 Protein of unknown function DUF167 Atc_0850 7b5accd137e63fc6e9b727e219da14d0 182 Gene3D G3DSA:3.30.910.20 22 182 8.8E-32 T 13-10-2018 IPR024930 Skp domain superfamily Atc_0850 7b5accd137e63fc6e9b727e219da14d0 182 Pfam PF03938 Outer membrane protein (OmpH-like) 15 171 1.7E-32 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Atc_0850 7b5accd137e63fc6e9b727e219da14d0 182 SUPERFAMILY SSF111384 31 171 1.31E-29 T 13-10-2018 Atc_0850 7b5accd137e63fc6e9b727e219da14d0 182 SMART SM00935 16 172 1.7E-39 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Atc_1669 0134b6a31f99a1ef0f8401f20a5b7c88 426 SUPERFAMILY SSF143243 1 85 1.44E-14 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1669 0134b6a31f99a1ef0f8401f20a5b7c88 426 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 192 346 7.3E-25 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1669 0134b6a31f99a1ef0f8401f20a5b7c88 426 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 2 42 4.0E-4 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1669 0134b6a31f99a1ef0f8401f20a5b7c88 426 SUPERFAMILY SSF56762 81 425 1.3E-81 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1669 0134b6a31f99a1ef0f8401f20a5b7c88 426 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 1 42 5.4E-6 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1669 0134b6a31f99a1ef0f8401f20a5b7c88 426 Gene3D G3DSA:1.10.645.20 72 425 2.5E-89 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 SMART SM00359 299 375 8.5E-14 T 13-10-2018 IPR002478 PUA domain GO:0003723 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 Pfam PF00696 Amino acid kinase family 22 256 8.1E-42 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 Hamap MF_00456 Glutamate 5-kinase [proB]. 21 286 34.153 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 Gene3D G3DSA:2.30.130.10 288 389 1.6E-26 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 Pfam PF01472 PUA domain 299 370 3.9E-18 T 13-10-2018 IPR002478 PUA domain GO:0003723 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 Gene3D G3DSA:3.40.1160.10 13 286 1.3E-87 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 ProSitePatterns PS00902 Glutamate 5-kinase signature. 229 246 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 PIRSF PIRSF000729 16 390 2.6E-119 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 SUPERFAMILY SSF88697 299 388 2.43E-18 T 13-10-2018 IPR015947 PUA-like superfamily Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 SUPERFAMILY SSF53633 21 277 6.94E-65 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 PRINTS PR00474 Glutamate 5-kinase family signature 58 72 1.9E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 PRINTS PR00474 Glutamate 5-kinase family signature 138 159 1.9E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 PRINTS PR00474 Glutamate 5-kinase family signature 231 251 1.9E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 PRINTS PR00474 Glutamate 5-kinase family signature 170 197 1.9E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_1715 c5aedc0efb983497a5571ead01e0d9c4 422 TIGRFAM TIGR01027 proB: glutamate 5-kinase 22 387 1.3E-118 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atc_1685 1213360abc794507f1b316881f0f3d53 347 Hamap MF_00268 Protein RecA [recA]. 5 330 52.297 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atc_1685 1213360abc794507f1b316881f0f3d53 347 ProSitePatterns PS00321 recA signature. 214 222 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Atc_1685 1213360abc794507f1b316881f0f3d53 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 324 1.2E-174 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atc_1685 1213360abc794507f1b316881f0f3d53 347 Pfam PF00154 recA bacterial DNA recombination protein 7 269 1.2E-146 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atc_1685 1213360abc794507f1b316881f0f3d53 347 Gene3D G3DSA:3.40.50.300 26 268 1.8E-83 T 13-10-2018 Atc_1685 1213360abc794507f1b316881f0f3d53 347 PRINTS PR00142 RecA protein signature 94 123 6.1E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atc_1685 1213360abc794507f1b316881f0f3d53 347 PRINTS PR00142 RecA protein signature 244 273 6.1E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atc_1685 1213360abc794507f1b316881f0f3d53 347 PRINTS PR00142 RecA protein signature 128 157 6.1E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atc_1685 1213360abc794507f1b316881f0f3d53 347 PRINTS PR00142 RecA protein signature 211 239 6.1E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atc_1685 1213360abc794507f1b316881f0f3d53 347 PRINTS PR00142 RecA protein signature 298 315 6.1E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atc_1685 1213360abc794507f1b316881f0f3d53 347 PRINTS PR00142 RecA protein signature 166 195 6.1E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atc_1685 1213360abc794507f1b316881f0f3d53 347 Gene3D G3DSA:3.30.250.10 269 327 8.1E-28 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Atc_1685 1213360abc794507f1b316881f0f3d53 347 SUPERFAMILY SSF52540 5 268 1.38E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1685 1213360abc794507f1b316881f0f3d53 347 SUPERFAMILY SSF54752 269 325 4.71E-22 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Atc_1685 1213360abc794507f1b316881f0f3d53 347 SMART SM00382 58 229 1.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1190 76fed40eeee8f13a697cfe02277530fd 864 Pfam PF04851 Type III restriction enzyme, res subunit 38 281 2.6E-15 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Atc_1190 76fed40eeee8f13a697cfe02277530fd 864 Gene3D G3DSA:3.40.50.300 375 498 1.5E-6 T 13-10-2018 Atc_1190 76fed40eeee8f13a697cfe02277530fd 864 SUPERFAMILY SSF52540 84 468 2.15E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1318 abf9006e9d54cb49ee177764dd857f68 530 Gene3D G3DSA:3.40.1020.10 327 504 4.6E-66 T 13-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Atc_1318 abf9006e9d54cb49ee177764dd857f68 530 SUPERFAMILY SSF53686 11 348 4.06E-104 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Atc_1318 abf9006e9d54cb49ee177764dd857f68 530 Gene3D G3DSA:3.40.50.1100 49 145 3.3E-139 T 13-10-2018 Atc_1318 abf9006e9d54cb49ee177764dd857f68 530 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 502 1.5E-235 T 13-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Atc_1318 abf9006e9d54cb49ee177764dd857f68 530 SUPERFAMILY SSF55021 325 412 1.56E-24 T 13-10-2018 Atc_1318 abf9006e9d54cb49ee177764dd857f68 530 Gene3D G3DSA:3.40.50.1100 13 316 3.3E-139 T 13-10-2018 Atc_1318 abf9006e9d54cb49ee177764dd857f68 530 SUPERFAMILY SSF55021 409 502 4.81E-24 T 13-10-2018 Atc_1318 abf9006e9d54cb49ee177764dd857f68 530 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 305 1.0E-87 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Atc_1318 abf9006e9d54cb49ee177764dd857f68 530 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 420 502 8.4E-21 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Atc_1318 abf9006e9d54cb49ee177764dd857f68 530 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 318 408 2.2E-24 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Atc_0024 4b67933f896a96c50f2803ffc5395f09 252 Pfam PF13614 AAA domain 1 173 2.5E-62 T 13-10-2018 IPR025669 AAA domain Atc_0024 4b67933f896a96c50f2803ffc5395f09 252 Gene3D G3DSA:3.40.50.300 1 250 1.5E-77 T 13-10-2018 Atc_0024 4b67933f896a96c50f2803ffc5395f09 252 PIRSF PIRSF009320 83 250 4.0E-11 T 13-10-2018 Atc_0024 4b67933f896a96c50f2803ffc5395f09 252 PIRSF PIRSF009320 1 83 1.8E-17 T 13-10-2018 Atc_0024 4b67933f896a96c50f2803ffc5395f09 252 SUPERFAMILY SSF52540 1 248 5.93E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1786 c9b0c360338c0c5c3a0d592e0f52c637 404 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 22 375 27.883 T 13-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Atc_1786 c9b0c360338c0c5c3a0d592e0f52c637 404 Gene3D G3DSA:3.30.930.10 9 332 4.1E-62 T 13-10-2018 Atc_1786 c9b0c360338c0c5c3a0d592e0f52c637 404 SUPERFAMILY SSF55681 10 327 2.3E-46 T 13-10-2018 Atc_1786 c9b0c360338c0c5c3a0d592e0f52c637 404 Pfam PF13393 Histidyl-tRNA synthetase 15 326 1.8E-102 T 13-10-2018 Atc_m016 07732fc9ecda22e6862be224302f01c0 193 Pfam PF13592 Winged helix-turn helix 100 156 6.2E-23 T 13-10-2018 IPR025959 Winged helix-turn helix domain Atc_m016 07732fc9ecda22e6862be224302f01c0 193 Pfam PF13518 Helix-turn-helix domain 21 68 3.4E-6 T 13-10-2018 Atc_m016 07732fc9ecda22e6862be224302f01c0 193 SUPERFAMILY SSF46689 13 133 2.33E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_1501 398903f5446dad5a6b5498348b71140e 247 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 219 3.2E-26 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atc_2515 2a6cdf0213815d2b4711b3ef6a276b1f 436 Gene3D G3DSA:1.20.1250.20 19 213 4.3E-7 T 13-10-2018 Atc_2515 2a6cdf0213815d2b4711b3ef6a276b1f 436 SUPERFAMILY SSF103473 32 407 1.83E-24 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_2515 2a6cdf0213815d2b4711b3ef6a276b1f 436 Gene3D G3DSA:1.20.1250.20 226 419 4.5E-11 T 13-10-2018 Atc_2515 2a6cdf0213815d2b4711b3ef6a276b1f 436 Pfam PF13347 MFS/sugar transport protein 35 417 6.3E-50 T 13-10-2018 Atc_2068 eb77bf5b9cc672a4f40c9f959d66cfd8 346 Pfam PF02195 ParB-like nuclease domain 20 70 1.9E-6 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_2068 eb77bf5b9cc672a4f40c9f959d66cfd8 346 SUPERFAMILY SSF110849 21 68 2.49E-10 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atc_2068 eb77bf5b9cc672a4f40c9f959d66cfd8 346 Gene3D G3DSA:3.90.1530.10 18 88 3.1E-6 T 13-10-2018 Atc_2421 c83b1295753dc7daa727a1d2d8b97ab6 94 Pfam PF13686 DsrE/DsrF/DrsH-like family 23 91 5.3E-9 T 13-10-2018 IPR032836 DsrE2-like family Atc_2421 c83b1295753dc7daa727a1d2d8b97ab6 94 Gene3D G3DSA:3.40.1260.10 4 94 1.1E-14 T 13-10-2018 IPR027396 DsrEFH-like Atc_2421 c83b1295753dc7daa727a1d2d8b97ab6 94 SUPERFAMILY SSF75169 2 74 1.65E-6 T 13-10-2018 IPR027396 DsrEFH-like Atc_0558 59a447bfd0460d9d0b74573ab0c2d024 129 Gene3D G3DSA:1.10.10.10 5 122 2.8E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0558 59a447bfd0460d9d0b74573ab0c2d024 129 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.5E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0558 59a447bfd0460d9d0b74573ab0c2d024 129 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 71 1.5E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0558 59a447bfd0460d9d0b74573ab0c2d024 129 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 1.5E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0558 59a447bfd0460d9d0b74573ab0c2d024 129 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 88 103 1.5E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0558 59a447bfd0460d9d0b74573ab0c2d024 129 Pfam PF01022 Bacterial regulatory protein, arsR family 48 86 4.9E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0558 59a447bfd0460d9d0b74573ab0c2d024 129 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 62 80 - T 13-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Atc_0558 59a447bfd0460d9d0b74573ab0c2d024 129 SUPERFAMILY SSF46785 25 115 1.14E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0558 59a447bfd0460d9d0b74573ab0c2d024 129 SMART SM00418 39 117 3.6E-21 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1895 59a447bfd0460d9d0b74573ab0c2d024 129 Gene3D G3DSA:1.10.10.10 5 122 2.8E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1895 59a447bfd0460d9d0b74573ab0c2d024 129 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.5E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1895 59a447bfd0460d9d0b74573ab0c2d024 129 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 71 1.5E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1895 59a447bfd0460d9d0b74573ab0c2d024 129 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 1.5E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1895 59a447bfd0460d9d0b74573ab0c2d024 129 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 88 103 1.5E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1895 59a447bfd0460d9d0b74573ab0c2d024 129 Pfam PF01022 Bacterial regulatory protein, arsR family 48 86 4.9E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1895 59a447bfd0460d9d0b74573ab0c2d024 129 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 62 80 - T 13-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Atc_1895 59a447bfd0460d9d0b74573ab0c2d024 129 SUPERFAMILY SSF46785 25 115 1.14E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1895 59a447bfd0460d9d0b74573ab0c2d024 129 SMART SM00418 39 117 3.6E-21 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0536 8a08411bad0a16b49861fe9e1d45e690 510 Pfam PF00795 Carbon-nitrogen hydrolase 254 465 2.3E-25 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atc_0536 8a08411bad0a16b49861fe9e1d45e690 510 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 71 455 2.8E-85 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Atc_0536 8a08411bad0a16b49861fe9e1d45e690 510 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 17 493 20.499 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Atc_0536 8a08411bad0a16b49861fe9e1d45e690 510 SUPERFAMILY SSF56317 231 486 5.76E-43 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_0536 8a08411bad0a16b49861fe9e1d45e690 510 Gene3D G3DSA:3.60.110.10 245 473 1.1E-26 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_0931 2ded4ca90303d08d37904744daa91d3c 76 Gene3D G3DSA:2.40.50.220 1 76 2.4E-24 T 13-10-2018 IPR036677 EutN/Ccml superfamily Atc_0931 2ded4ca90303d08d37904744daa91d3c 76 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 5 74 6.0E-26 T 13-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Atc_0931 2ded4ca90303d08d37904744daa91d3c 76 SUPERFAMILY SSF159133 1 75 8.63E-20 T 13-10-2018 IPR036677 EutN/Ccml superfamily Atc_0931 2ded4ca90303d08d37904744daa91d3c 76 TIGRFAM TIGR02704 carboxysome_B: carboxysome peptide B 1 75 5.8E-41 T 13-10-2018 IPR014077 Carboxysome peptide B Atc_0931 2ded4ca90303d08d37904744daa91d3c 76 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 72 3.1E-15 T 13-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Atc_1676 d81d6d844ba96b05a378b4577698e1b1 460 SUPERFAMILY SSF53244 310 445 2.22E-37 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_1676 d81d6d844ba96b05a378b4577698e1b1 460 SUPERFAMILY SSF53623 95 308 6.54E-46 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_1676 d81d6d844ba96b05a378b4577698e1b1 460 Pfam PF08245 Mur ligase middle domain 108 291 1.3E-14 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Atc_1676 d81d6d844ba96b05a378b4577698e1b1 460 Gene3D G3DSA:3.40.50.720 1 90 6.8E-30 T 13-10-2018 Atc_1676 d81d6d844ba96b05a378b4577698e1b1 460 Pfam PF01225 Mur ligase family, catalytic domain 2 96 6.0E-14 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Atc_1676 d81d6d844ba96b05a378b4577698e1b1 460 Gene3D G3DSA:3.90.190.20 314 447 4.0E-28 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_1676 d81d6d844ba96b05a378b4577698e1b1 460 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 446 56.295 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Atc_1676 d81d6d844ba96b05a378b4577698e1b1 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 385 1.1E-9 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Atc_1676 d81d6d844ba96b05a378b4577698e1b1 460 SUPERFAMILY SSF51984 1 88 4.84E-20 T 13-10-2018 Atc_1676 d81d6d844ba96b05a378b4577698e1b1 460 Gene3D G3DSA:3.40.1190.10 94 311 1.4E-49 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_1676 d81d6d844ba96b05a378b4577698e1b1 460 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 445 4.6E-192 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Atc_2694 c9e247183c3778a3666b5311f912c5e8 397 Pfam PF03595 Voltage-dependent anion channel 18 349 2.9E-80 T 13-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 Atc_2694 c9e247183c3778a3666b5311f912c5e8 397 Gene3D G3DSA:1.50.10.150 14 362 6.9E-21 T 13-10-2018 IPR038665 Voltage-dependent anion channel superfamily Atc_0142 f725177b76a9c677496d1ebb65e885be 268 PRINTS PR00474 Glutamate 5-kinase family signature 104 125 8.3E-43 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_0142 f725177b76a9c677496d1ebb65e885be 268 PRINTS PR00474 Glutamate 5-kinase family signature 64 92 8.3E-43 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_0142 f725177b76a9c677496d1ebb65e885be 268 PRINTS PR00474 Glutamate 5-kinase family signature 197 217 8.3E-43 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_0142 f725177b76a9c677496d1ebb65e885be 268 PRINTS PR00474 Glutamate 5-kinase family signature 136 163 8.3E-43 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_0142 f725177b76a9c677496d1ebb65e885be 268 PRINTS PR00474 Glutamate 5-kinase family signature 28 42 8.3E-43 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_0142 f725177b76a9c677496d1ebb65e885be 268 Pfam PF00696 Amino acid kinase family 12 222 1.3E-34 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Atc_0142 f725177b76a9c677496d1ebb65e885be 268 PIRSF PIRSF000729 1 256 1.1E-64 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Atc_0142 f725177b76a9c677496d1ebb65e885be 268 TIGRFAM TIGR01027 proB: glutamate 5-kinase 1 246 5.1E-62 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atc_0142 f725177b76a9c677496d1ebb65e885be 268 SUPERFAMILY SSF53633 2 245 1.05E-51 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_0142 f725177b76a9c677496d1ebb65e885be 268 Gene3D G3DSA:3.40.1160.10 1 248 3.9E-68 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_0142 f725177b76a9c677496d1ebb65e885be 268 ProSitePatterns PS00902 Glutamate 5-kinase signature. 195 212 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atc_0975 4044b26d56cf3160edca066ee0724991 163 SUPERFAMILY SSF52788 5 138 3.66E-38 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Atc_0975 4044b26d56cf3160edca066ee0724991 163 SMART SM00226 4 138 5.6E-35 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Atc_0975 4044b26d56cf3160edca066ee0724991 163 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 136 4.4E-21 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Atc_0975 4044b26d56cf3160edca066ee0724991 163 Gene3D G3DSA:3.40.50.2300 1 140 7.4E-38 T 13-10-2018 Atc_1465 40760d6ed810f3f6af6a42264d0827e0 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 243 1.2E-33 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Atc_1465 40760d6ed810f3f6af6a42264d0827e0 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 3.4E-48 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Atc_1465 40760d6ed810f3f6af6a42264d0827e0 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 259 1.1E-25 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Atc_1465 40760d6ed810f3f6af6a42264d0827e0 261 SUPERFAMILY SSF117143 93 222 8.63E-39 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Atc_1465 40760d6ed810f3f6af6a42264d0827e0 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Atc_1465 40760d6ed810f3f6af6a42264d0827e0 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 7.1E-119 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Atc_1465 40760d6ed810f3f6af6a42264d0827e0 261 Pfam PF00460 Flagella basal body rod protein 5 35 3.1E-13 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Atc_1465 40760d6ed810f3f6af6a42264d0827e0 261 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 241 1.4E-55 T 13-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 Atc_0459 3b975c696d591aa3802610e184ccd4a0 315 Gene3D G3DSA:3.40.50.2020 9 302 2.2E-126 T 13-10-2018 Atc_0459 3b975c696d591aa3802610e184ccd4a0 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 6 314 49.222 T 13-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Atc_0459 3b975c696d591aa3802610e184ccd4a0 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 313 5.8E-32 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Atc_0459 3b975c696d591aa3802610e184ccd4a0 315 SMART SM01400 6 122 5.4E-75 T 13-10-2018 Atc_0459 3b975c696d591aa3802610e184ccd4a0 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 13-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Atc_0459 3b975c696d591aa3802610e184ccd4a0 315 Gene3D G3DSA:3.40.50.2020 149 290 2.2E-126 T 13-10-2018 Atc_0459 3b975c696d591aa3802610e184ccd4a0 315 SUPERFAMILY SSF53271 71 304 1.43E-64 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Atc_0459 3b975c696d591aa3802610e184ccd4a0 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 122 3.0E-47 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Atc_0459 3b975c696d591aa3802610e184ccd4a0 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 313 5.8E-122 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Atc_0102 fa4b1607dfcf57e967513df7d67d17ca 195 SUPERFAMILY SSF51306 43 182 1.26E-11 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Atc_0102 fa4b1607dfcf57e967513df7d67d17ca 195 Pfam PF10502 Signal peptidase, peptidase S26 38 182 6.3E-19 T 13-10-2018 IPR019533 Peptidase S26 Atc_1974 5de33d92a16af8f029a51322836818da 107 Gene3D G3DSA:3.30.70.120 1 107 5.4E-30 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Atc_1974 5de33d92a16af8f029a51322836818da 107 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 1.3E-27 T 13-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 Atc_1974 5de33d92a16af8f029a51322836818da 107 SUPERFAMILY SSF54913 3 105 2.93E-29 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Atc_2423 3b8a62c034bb9f3f80e3959b86903ac0 379 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 2.9E-5 T 13-10-2018 Atc_2423 3b8a62c034bb9f3f80e3959b86903ac0 379 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 2.9E-5 T 13-10-2018 Atc_2423 3b8a62c034bb9f3f80e3959b86903ac0 379 SUPERFAMILY SSF51905 117 248 1.78E-19 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2423 3b8a62c034bb9f3f80e3959b86903ac0 379 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 290 8.8E-16 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_2423 3b8a62c034bb9f3f80e3959b86903ac0 379 Gene3D G3DSA:3.50.50.60 3 313 4.7E-79 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2423 3b8a62c034bb9f3f80e3959b86903ac0 379 SUPERFAMILY SSF51905 1 150 2.05E-26 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2423 3b8a62c034bb9f3f80e3959b86903ac0 379 Gene3D G3DSA:3.50.50.60 114 257 4.7E-79 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 20 42 4.0E-5 T 13-10-2018 Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 368 375 4.0E-5 T 13-10-2018 Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 Gene3D G3DSA:3.50.50.60 20 401 8.4E-148 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 SUPERFAMILY SSF46977 437 518 2.09E-19 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 Pfam PF02910 Fumarate reductase flavoprotein C-term 438 517 1.5E-11 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 19 516 3.1E-162 T 13-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 21 40 5.6E-9 T 13-10-2018 Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 375 5.6E-9 T 13-10-2018 Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 SUPERFAMILY SSF56425 236 351 5.38E-36 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 SUPERFAMILY SSF51905 12 406 7.65E-64 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 Gene3D G3DSA:3.90.700.10 246 356 8.4E-148 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 Pfam PF00890 FAD binding domain 20 390 5.0E-97 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atc_2306 23853248e3ca89fb59aa8ef00fb07442 561 Gene3D G3DSA:1.20.58.100 428 531 9.1E-21 T 13-10-2018 Atc_0871 cb5bc8737a7eaeb199d69d3884534403 193 Pfam PF12007 Protein of unknown function (DUF3501) 3 192 1.8E-71 T 13-10-2018 IPR021890 Protein of unknown function DUF3501 Atc_0935 c98e3c917c2198df67c469ba08e20fe7 94 Gene3D G3DSA:3.30.1360.20 7 90 1.0E-23 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Atc_0935 c98e3c917c2198df67c469ba08e20fe7 94 SUPERFAMILY SSF55248 11 66 2.88E-9 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Atc_1214 1208ed26f9c978f867ea7e5e2318fa3b 395 SUPERFAMILY SSF55979 276 353 5.08E-5 T 13-10-2018 Atc_1214 1208ed26f9c978f867ea7e5e2318fa3b 395 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 271 353 1.3E-6 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Atc_1214 1208ed26f9c978f867ea7e5e2318fa3b 395 SMART SM00480 16 372 7.9E-9 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Atc_1214 1208ed26f9c978f867ea7e5e2318fa3b 395 SUPERFAMILY SSF55979 122 259 3.14E-8 T 13-10-2018 Atc_1214 1208ed26f9c978f867ea7e5e2318fa3b 395 Gene3D G3DSA:3.10.150.10 1 115 7.7E-6 T 13-10-2018 Atc_1214 1208ed26f9c978f867ea7e5e2318fa3b 395 Gene3D G3DSA:3.10.150.10 121 264 4.0E-18 T 13-10-2018 Atc_1214 1208ed26f9c978f867ea7e5e2318fa3b 395 Pfam PF02767 DNA polymerase III beta subunit, central domain 125 185 2.1E-5 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Atc_1214 1208ed26f9c978f867ea7e5e2318fa3b 395 Gene3D G3DSA:3.10.150.10 269 395 2.7E-8 T 13-10-2018 Atc_1945 16119e3502bfc844ad8d498a84976673 180 Gene3D G3DSA:3.40.50.300 1 161 1.4E-37 T 13-10-2018 Atc_1945 16119e3502bfc844ad8d498a84976673 180 Pfam PF01695 IstB-like ATP binding protein 3 149 1.1E-41 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_1945 16119e3502bfc844ad8d498a84976673 180 SUPERFAMILY SSF52540 15 143 5.05E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2767 426a4763ba938096fea7703040f8798d 183 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 156 176 3.3E-7 T 13-10-2018 Atc_2767 426a4763ba938096fea7703040f8798d 183 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 118 135 3.3E-7 T 13-10-2018 Atc_2767 426a4763ba938096fea7703040f8798d 183 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 136 155 3.3E-7 T 13-10-2018 Atc_2767 426a4763ba938096fea7703040f8798d 183 PRINTS PR01021 OMPA domain signature 118 134 9.6E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_2767 426a4763ba938096fea7703040f8798d 183 PRINTS PR01021 OMPA domain signature 73 95 9.6E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_2767 426a4763ba938096fea7703040f8798d 183 PRINTS PR01021 OMPA domain signature 103 118 9.6E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_2767 426a4763ba938096fea7703040f8798d 183 SUPERFAMILY SSF103088 44 171 9.81E-33 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_2767 426a4763ba938096fea7703040f8798d 183 Pfam PF00691 OmpA family 72 166 1.7E-22 T 13-10-2018 IPR006665 OmpA-like domain Atc_2767 426a4763ba938096fea7703040f8798d 183 Gene3D G3DSA:3.30.1330.60 54 181 7.8E-36 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_3p22 147ce1afbb74e615e812f404dd598cb5 92 Pfam PF05406 WGR domain 24 89 4.5E-8 T 13-10-2018 IPR008893 WGR domain Atc_3p22 147ce1afbb74e615e812f404dd598cb5 92 SUPERFAMILY SSF142921 21 87 6.54E-10 T 13-10-2018 IPR036930 WGR domain superfamily Atc_2293 b3dba2d66739b5e6805d0b60152ef35d 304 SUPERFAMILY SSF53613 1 297 4.83E-58 T 13-10-2018 IPR029056 Ribokinase-like Atc_2293 b3dba2d66739b5e6805d0b60152ef35d 304 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 62 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Atc_2293 b3dba2d66739b5e6805d0b60152ef35d 304 Gene3D G3DSA:3.40.1190.20 1 296 2.3E-117 T 13-10-2018 IPR029056 Ribokinase-like Atc_2293 b3dba2d66739b5e6805d0b60152ef35d 304 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 1 299 4.9E-117 T 13-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Atc_2293 b3dba2d66739b5e6805d0b60152ef35d 304 Pfam PF00294 pfkB family carbohydrate kinase 1 289 5.0E-45 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Atc_1191 cdfc28834aab10ff53d71ee2ca00aea7 571 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 65 71 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_1191 cdfc28834aab10ff53d71ee2ca00aea7 571 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 62 74 2.4E-15 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Atc_1191 cdfc28834aab10ff53d71ee2ca00aea7 571 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 351 373 2.4E-15 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Atc_1191 cdfc28834aab10ff53d71ee2ca00aea7 571 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 374 388 2.4E-15 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Atc_1191 cdfc28834aab10ff53d71ee2ca00aea7 571 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 116 135 2.4E-15 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Atc_1191 cdfc28834aab10ff53d71ee2ca00aea7 571 SUPERFAMILY SSF53335 37 424 3.09E-55 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1191 cdfc28834aab10ff53d71ee2ca00aea7 571 Pfam PF01555 DNA methylase 62 412 2.0E-35 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Atc_1191 cdfc28834aab10ff53d71ee2ca00aea7 571 PIRSF PIRSF015855 3 460 2.2E-93 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Atc_2439 fdbd4c9cc4957668a7cee14a7d03b796 387 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 13-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atc_2439 fdbd4c9cc4957668a7cee14a7d03b796 387 SUPERFAMILY SSF52210 240 384 1.14E-53 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atc_2439 fdbd4c9cc4957668a7cee14a7d03b796 387 Pfam PF08442 ATP-grasp domain 2 202 1.8E-68 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atc_2439 fdbd4c9cc4957668a7cee14a7d03b796 387 Gene3D G3DSA:3.40.50.261 240 387 7.6E-57 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atc_2439 fdbd4c9cc4957668a7cee14a7d03b796 387 Gene3D G3DSA:3.30.1490.20 21 104 1.2E-80 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atc_2439 fdbd4c9cc4957668a7cee14a7d03b796 387 PIRSF PIRSF001554 1 387 1.9E-141 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atc_2439 fdbd4c9cc4957668a7cee14a7d03b796 387 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.751 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atc_2439 fdbd4c9cc4957668a7cee14a7d03b796 387 Pfam PF00549 CoA-ligase 262 382 1.4E-25 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atc_2439 fdbd4c9cc4957668a7cee14a7d03b796 387 Gene3D G3DSA:3.30.470.20 2 232 1.2E-80 T 13-10-2018 Atc_2439 fdbd4c9cc4957668a7cee14a7d03b796 387 SUPERFAMILY SSF56059 2 237 4.42E-69 T 13-10-2018 Atc_2439 fdbd4c9cc4957668a7cee14a7d03b796 387 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 385 2.9E-147 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atc_1296 227ad8e88d3a0cf86dc9a9dc918d7e2a 257 Gene3D G3DSA:1.10.443.10 51 223 4.5E-36 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_1296 227ad8e88d3a0cf86dc9a9dc918d7e2a 257 SUPERFAMILY SSF56349 5 217 1.18E-50 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_1296 227ad8e88d3a0cf86dc9a9dc918d7e2a 257 Pfam PF00589 Phage integrase family 55 210 1.9E-36 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 120 9.7E-16 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 1.8E-54 T 13-10-2018 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 109 129 1.8E-54 T 13-10-2018 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 156 177 1.8E-54 T 13-10-2018 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 244 270 1.8E-54 T 13-10-2018 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 222 243 1.8E-54 T 13-10-2018 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 416 435 1.8E-54 T 13-10-2018 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 1.8E-54 T 13-10-2018 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 Pfam PF00361 Proton-conducting membrane transporter 132 414 3.8E-75 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 415 437 1.2E-14 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 57 81 1.2E-14 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 262 284 1.2E-14 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 83 103 1.2E-14 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atc_2578 43f575fc91162610bb4c9243cc8008e9 619 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 6 615 1.7E-162 T 13-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2278 f5c29e722c2aef0f0f76a8c42dac6f6f 225 Gene3D G3DSA:3.40.50.1820 4 214 5.3E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_2278 f5c29e722c2aef0f0f76a8c42dac6f6f 225 SUPERFAMILY SSF53474 10 212 3.13E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_2278 f5c29e722c2aef0f0f76a8c42dac6f6f 225 Pfam PF02230 Phospholipase/Carboxylesterase 15 211 3.1E-39 T 13-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 Atc_2324 448ea49b45b1edc6eb93377429cb1a24 343 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 123 309 1.9E-26 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Atc_2324 448ea49b45b1edc6eb93377429cb1a24 343 Gene3D G3DSA:3.40.50.2000 160 338 1.4E-40 T 13-10-2018 Atc_2324 448ea49b45b1edc6eb93377429cb1a24 343 SUPERFAMILY SSF53756 7 336 3.82E-60 T 13-10-2018 Atc_2324 448ea49b45b1edc6eb93377429cb1a24 343 Gene3D G3DSA:3.40.50.2000 2 138 8.4E-13 T 13-10-2018 Atc_1004 50b722249362cd37afbb0317f2619c76 251 SMART SM00852 6 166 2.8E-21 T 13-10-2018 IPR001453 MoaB/Mog domain Atc_1004 50b722249362cd37afbb0317f2619c76 251 Pfam PF00994 Probable molybdopterin binding domain 7 160 4.4E-18 T 13-10-2018 IPR001453 MoaB/Mog domain Atc_1004 50b722249362cd37afbb0317f2619c76 251 Gene3D G3DSA:3.40.980.10 3 163 2.7E-30 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atc_1004 50b722249362cd37afbb0317f2619c76 251 SUPERFAMILY SSF53218 4 162 6.54E-23 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atc_2589 6676a75b249b4aa407296579ac8f91cf 156 SUPERFAMILY SSF55961 1 145 4.87E-33 T 13-10-2018 Atc_2589 6676a75b249b4aa407296579ac8f91cf 156 Gene3D G3DSA:3.30.530.20 1 143 1.7E-38 T 13-10-2018 IPR023393 START-like domain superfamily Atc_2589 6676a75b249b4aa407296579ac8f91cf 156 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 133 1.3E-26 T 13-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Atc_2424 40d6dff22728a67fa818ba1bc5ffebc7 267 Gene3D G3DSA:3.40.50.2300 138 255 3.7E-20 T 13-10-2018 Atc_2424 40d6dff22728a67fa818ba1bc5ffebc7 267 Gene3D G3DSA:3.40.50.2300 20 75 2.3E-6 T 13-10-2018 Atc_2424 40d6dff22728a67fa818ba1bc5ffebc7 267 Gene3D G3DSA:3.40.50.2300 78 135 1.6E-7 T 13-10-2018 Atc_2424 40d6dff22728a67fa818ba1bc5ffebc7 267 SUPERFAMILY SSF48371 13 221 1.55E-5 T 13-10-2018 IPR016024 Armadillo-type fold Atc_m181 4b43c6ba41c49873bf89fb2be6ca27cc 262 SUPERFAMILY SSF52540 73 239 1.05E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m181 4b43c6ba41c49873bf89fb2be6ca27cc 262 Gene3D G3DSA:3.40.50.300 63 247 8.1E-51 T 13-10-2018 Atc_m181 4b43c6ba41c49873bf89fb2be6ca27cc 262 SMART SM00382 99 232 1.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_m181 4b43c6ba41c49873bf89fb2be6ca27cc 262 Pfam PF01695 IstB-like ATP binding protein 55 231 7.7E-67 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_m181 4b43c6ba41c49873bf89fb2be6ca27cc 262 PIRSF PIRSF003073 1 253 9.0E-87 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_1447 75f7452552e55708ecd01080d91781c3 250 SMART SM00849 27 223 1.5E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_1447 75f7452552e55708ecd01080d91781c3 250 SUPERFAMILY SSF56281 7 241 2.62E-30 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_1447 75f7452552e55708ecd01080d91781c3 250 Pfam PF00753 Metallo-beta-lactamase superfamily 26 223 1.7E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_1447 75f7452552e55708ecd01080d91781c3 250 Gene3D G3DSA:3.60.15.10 6 244 1.3E-37 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_0035 9876da8dc1332656451b92c36e94ab4e 458 Gene3D G3DSA:3.90.550.10 3 227 2.2E-53 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0035 9876da8dc1332656451b92c36e94ab4e 458 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 452 38.365 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Atc_0035 9876da8dc1332656451b92c36e94ab4e 458 SUPERFAMILY SSF53448 5 251 2.62E-53 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0035 9876da8dc1332656451b92c36e94ab4e 458 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atc_0035 9876da8dc1332656451b92c36e94ab4e 458 SUPERFAMILY SSF51161 256 436 1.22E-47 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Atc_0035 9876da8dc1332656451b92c36e94ab4e 458 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 455 6.2E-170 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Atc_0035 9876da8dc1332656451b92c36e94ab4e 458 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 269 298 0.045 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_0035 9876da8dc1332656451b92c36e94ab4e 458 Gene3D G3DSA:2.160.10.10 229 456 9.1E-62 T 13-10-2018 Atc_0035 9876da8dc1332656451b92c36e94ab4e 458 Pfam PF12804 MobA-like NTP transferase domain 5 126 4.2E-24 T 13-10-2018 IPR025877 MobA-like NTP transferase Atc_0035 9876da8dc1332656451b92c36e94ab4e 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 351 1.5E-6 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_0035 9876da8dc1332656451b92c36e94ab4e 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 1.3E-6 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_3p02 032941f6c0c810708e81758b46e942a4 652 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 37 353 4.4E-41 T 13-10-2018 IPR014150 Conjugal transfer, TrbL Atc_3p02 032941f6c0c810708e81758b46e942a4 652 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 65 295 3.1E-19 T 13-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 Pfam PF01336 OB-fold nucleic acid binding domain 61 135 2.6E-15 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 SUPERFAMILY SSF55681 151 491 4.62E-117 T 13-10-2018 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 4 493 4.5E-193 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 SUPERFAMILY SSF50249 3 144 1.67E-41 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0315 40a11e0ca949a9e495bae759c3828080 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 188 198 5.3E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 251 268 5.3E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 5.3E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 233 246 5.3E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 375 391 5.3E-39 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 Gene3D G3DSA:3.30.930.10 147 495 5.6E-129 T 13-10-2018 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 Gene3D G3DSA:2.40.50.140 5 143 6.9E-43 T 13-10-2018 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 Pfam PF00152 tRNA synthetases class II (D, K and N) 152 490 3.0E-77 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atc_0315 40a11e0ca949a9e495bae759c3828080 495 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 11 493 42.576 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atc_2669 789815e0569f26a345d0ca543430a508 459 SUPERFAMILY SSF58100 39 215 1.02E-5 T 13-10-2018 Atc_2669 789815e0569f26a345d0ca543430a508 459 Pfam PF01551 Peptidase family M23 360 453 6.4E-23 T 13-10-2018 IPR016047 Peptidase M23 Atc_2669 789815e0569f26a345d0ca543430a508 459 SUPERFAMILY SSF51261 279 457 2.51E-34 T 13-10-2018 IPR011055 Duplicated hybrid motif Atc_2669 789815e0569f26a345d0ca543430a508 459 Gene3D G3DSA:2.70.70.10 328 458 1.7E-28 T 13-10-2018 IPR011055 Duplicated hybrid motif Atc_2669 789815e0569f26a345d0ca543430a508 459 Gene3D G3DSA:1.20.5.340 21 122 2.4E-5 T 13-10-2018 Atc_1420 0a5d9ba8e31a5dd3446cb897f4c1b170 189 Pfam PF12019 Type II transport protein GspH 52 171 3.1E-5 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 Atc_1420 0a5d9ba8e31a5dd3446cb897f4c1b170 189 SUPERFAMILY SSF54523 15 101 3.14E-15 T 13-10-2018 Atc_1420 0a5d9ba8e31a5dd3446cb897f4c1b170 189 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_1420 0a5d9ba8e31a5dd3446cb897f4c1b170 189 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 34 9.8E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_1420 0a5d9ba8e31a5dd3446cb897f4c1b170 189 Gene3D G3DSA:3.30.700.10 15 187 2.0E-14 T 13-10-2018 Atc_1420 0a5d9ba8e31a5dd3446cb897f4c1b170 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 9.6E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_0767 57ad25a134d10a5ce0c17e80930e7487 335 Pfam PF13412 Winged helix-turn-helix DNA-binding 222 268 3.2E-11 T 13-10-2018 Atc_0767 57ad25a134d10a5ce0c17e80930e7487 335 Pfam PF07238 PilZ domain 113 189 2.0E-7 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Atc_0767 57ad25a134d10a5ce0c17e80930e7487 335 Gene3D G3DSA:1.10.10.10 213 324 2.3E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0767 57ad25a134d10a5ce0c17e80930e7487 335 SUPERFAMILY SSF46785 220 316 4.62E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0767 57ad25a134d10a5ce0c17e80930e7487 335 SMART SM00347 215 313 0.0037 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atc_0767 57ad25a134d10a5ce0c17e80930e7487 335 TIGRFAM TIGR04176 MarR_EPS: EPS-associated transcriptional regulator, MarR family 221 323 1.4E-39 T 13-10-2018 IPR026433 EPS-associated transcriptional regulator, MarR family Atc_0767 57ad25a134d10a5ce0c17e80930e7487 335 Gene3D G3DSA:2.40.10.220 113 212 1.2E-7 T 13-10-2018 Atc_1088 d64ada1650bd75effbeb20938729d316 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Atc_1088 d64ada1650bd75effbeb20938729d316 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 327 9.6E-26 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Atc_1088 d64ada1650bd75effbeb20938729d316 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 296 2.1E-56 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atc_1088 d64ada1650bd75effbeb20938729d316 330 Gene3D G3DSA:3.40.50.720 7 320 1.1E-124 T 13-10-2018 Atc_1088 d64ada1650bd75effbeb20938729d316 330 SUPERFAMILY SSF52283 2 133 3.83E-33 T 13-10-2018 Atc_1088 d64ada1650bd75effbeb20938729d316 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Atc_1088 d64ada1650bd75effbeb20938729d316 330 SUPERFAMILY SSF51735 101 297 6.23E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1088 d64ada1650bd75effbeb20938729d316 330 Gene3D G3DSA:3.40.50.720 101 296 1.1E-124 T 13-10-2018 Atc_1176 e0b58fa238d4f44b4d58df96cca705a2 504 Pfam PF04917 Bacterial shufflon protein, N-terminal constant region 34 274 8.7E-32 T 13-10-2018 IPR007001 Bacterial shufflon protein, N-terminal Atc_1597 0fe2ffcd95298a6ee676b52ebdc0e479 352 SUPERFAMILY SSF46689 16 137 5.11E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_1597 0fe2ffcd95298a6ee676b52ebdc0e479 352 Pfam PF13358 DDE superfamily endonuclease 177 315 3.4E-35 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Atc_1597 0fe2ffcd95298a6ee676b52ebdc0e479 352 Pfam PF13518 Helix-turn-helix domain 25 72 1.1E-6 T 13-10-2018 Atc_1597 0fe2ffcd95298a6ee676b52ebdc0e479 352 Pfam PF13592 Winged helix-turn helix 104 160 1.8E-22 T 13-10-2018 IPR025959 Winged helix-turn helix domain Atc_1597 0fe2ffcd95298a6ee676b52ebdc0e479 352 Gene3D G3DSA:3.30.420.470 150 340 6.4E-10 T 13-10-2018 Atc_0091 0fe2ffcd95298a6ee676b52ebdc0e479 352 SUPERFAMILY SSF46689 16 137 5.11E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0091 0fe2ffcd95298a6ee676b52ebdc0e479 352 Pfam PF13358 DDE superfamily endonuclease 177 315 3.4E-35 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Atc_0091 0fe2ffcd95298a6ee676b52ebdc0e479 352 Pfam PF13518 Helix-turn-helix domain 25 72 1.1E-6 T 13-10-2018 Atc_0091 0fe2ffcd95298a6ee676b52ebdc0e479 352 Pfam PF13592 Winged helix-turn helix 104 160 1.8E-22 T 13-10-2018 IPR025959 Winged helix-turn helix domain Atc_0091 0fe2ffcd95298a6ee676b52ebdc0e479 352 Gene3D G3DSA:3.30.420.470 150 340 6.4E-10 T 13-10-2018 Atc_0518 0fe2ffcd95298a6ee676b52ebdc0e479 352 SUPERFAMILY SSF46689 16 137 5.11E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0518 0fe2ffcd95298a6ee676b52ebdc0e479 352 Pfam PF13358 DDE superfamily endonuclease 177 315 3.4E-35 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Atc_0518 0fe2ffcd95298a6ee676b52ebdc0e479 352 Pfam PF13518 Helix-turn-helix domain 25 72 1.1E-6 T 13-10-2018 Atc_0518 0fe2ffcd95298a6ee676b52ebdc0e479 352 Pfam PF13592 Winged helix-turn helix 104 160 1.8E-22 T 13-10-2018 IPR025959 Winged helix-turn helix domain Atc_0518 0fe2ffcd95298a6ee676b52ebdc0e479 352 Gene3D G3DSA:3.30.420.470 150 340 6.4E-10 T 13-10-2018 Atc_2546 0db84add80aabe996d2681f3f756144a 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 1.0E-44 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2546 0db84add80aabe996d2681f3f756144a 163 Gene3D G3DSA:3.30.70.3270 37 163 6.3E-39 T 13-10-2018 Atc_2546 0db84add80aabe996d2681f3f756144a 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 160 27.503 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2546 0db84add80aabe996d2681f3f756144a 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atc_2546 0db84add80aabe996d2681f3f756144a 163 SUPERFAMILY SSF54862 37 147 2.64E-26 T 13-10-2018 Atc_2546 0db84add80aabe996d2681f3f756144a 163 Pfam PF12838 4Fe-4S dicluster domain 63 116 1.5E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atc_2298 f131bcfade66daa6b4f08971098f9562 288 TIGRFAM TIGR00436 era: GTP-binding protein Era 1 269 3.2E-71 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2298 f131bcfade66daa6b4f08971098f9562 288 Pfam PF01926 50S ribosome-binding GTPase 1 114 1.4E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2298 f131bcfade66daa6b4f08971098f9562 288 Gene3D G3DSA:3.40.50.300 1 170 1.0E-40 T 13-10-2018 Atc_2298 f131bcfade66daa6b4f08971098f9562 288 Pfam PF07650 KH domain 200 274 4.9E-13 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_2298 f131bcfade66daa6b4f08971098f9562 288 Gene3D G3DSA:3.30.300.20 175 287 6.6E-36 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Atc_2298 f131bcfade66daa6b4f08971098f9562 288 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 155 1.7E-23 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atc_2298 f131bcfade66daa6b4f08971098f9562 288 SUPERFAMILY SSF54814 172 286 1.11E-36 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Atc_2298 f131bcfade66daa6b4f08971098f9562 288 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 50 65 5.1E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2298 f131bcfade66daa6b4f08971098f9562 288 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 1 18 5.1E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2298 f131bcfade66daa6b4f08971098f9562 288 SUPERFAMILY SSF52540 1 193 3.65E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2298 f131bcfade66daa6b4f08971098f9562 288 Hamap MF_00367 GTPase Era [era]. 1 286 30.311 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0825 a5536d40de384fa0e4b68fa76670913f 252 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 1.1E-75 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Atc_0825 a5536d40de384fa0e4b68fa76670913f 252 PIRSF PIRSF000441 1 224 3.6E-86 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Atc_0825 a5536d40de384fa0e4b68fa76670913f 252 SUPERFAMILY SSF51161 7 169 3.6E-56 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Atc_0825 a5536d40de384fa0e4b68fa76670913f 252 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atc_0825 a5536d40de384fa0e4b68fa76670913f 252 Gene3D G3DSA:2.160.10.10 67 180 2.3E-37 T 13-10-2018 Atc_0825 a5536d40de384fa0e4b68fa76670913f 252 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 1.4E-6 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_0825 a5536d40de384fa0e4b68fa76670913f 252 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 1.7E-5 T 13-10-2018 IPR001451 Hexapeptide repeat Atc_0825 a5536d40de384fa0e4b68fa76670913f 252 Gene3D G3DSA:1.10.3130.10 2 66 3.0E-22 T 13-10-2018 Atc_0708 4fbf3cb3943e3896f855c17523072ecc 330 Gene3D G3DSA:2.40.30.170 42 256 3.4E-37 T 13-10-2018 Atc_0708 4fbf3cb3943e3896f855c17523072ecc 330 Gene3D G3DSA:2.40.420.20 34 321 3.4E-37 T 13-10-2018 Atc_0708 4fbf3cb3943e3896f855c17523072ecc 330 Gene3D G3DSA:1.10.287.470 88 146 3.4E-37 T 13-10-2018 Atc_0708 4fbf3cb3943e3896f855c17523072ecc 330 SUPERFAMILY SSF111369 45 198 1.83E-13 T 13-10-2018 Atc_0708 4fbf3cb3943e3896f855c17523072ecc 330 Gene3D G3DSA:2.40.50.100 55 185 3.4E-37 T 13-10-2018 Atc_0708 4fbf3cb3943e3896f855c17523072ecc 330 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 31 324 6.2E-36 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_0708 4fbf3cb3943e3896f855c17523072ecc 330 Pfam PF13437 HlyD family secretion protein 152 239 1.2E-6 T 13-10-2018 Atc_0130 643429b868cfd0508ff8e9f290af6541 61 Gene3D G3DSA:1.10.260.40 2 61 2.6E-23 T 13-10-2018 Atc_0130 643429b868cfd0508ff8e9f290af6541 61 SUPERFAMILY SSF47413 4 59 2.45E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_0633 f8a3027d60bd456483d02a815252bdad 128 Pfam PF01196 Ribosomal protein L17 20 116 5.2E-34 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0633 f8a3027d60bd456483d02a815252bdad 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0633 f8a3027d60bd456483d02a815252bdad 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.838 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0633 f8a3027d60bd456483d02a815252bdad 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 4.5E-43 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0633 f8a3027d60bd456483d02a815252bdad 128 Gene3D G3DSA:3.90.1030.10 1 116 3.0E-47 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0633 f8a3027d60bd456483d02a815252bdad 128 SUPERFAMILY SSF64263 1 119 8.76E-49 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2251 b1a311572385904a45097c1356aceebe 460 Gene3D G3DSA:1.20.1600.10 24 440 6.6E-102 T 13-10-2018 Atc_2251 b1a311572385904a45097c1356aceebe 460 SUPERFAMILY SSF56954 4 424 9.81E-81 T 13-10-2018 Atc_2251 b1a311572385904a45097c1356aceebe 460 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 432 1.2E-85 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 Atc_2251 b1a311572385904a45097c1356aceebe 460 Pfam PF02321 Outer membrane efflux protein 28 214 2.1E-29 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_2251 b1a311572385904a45097c1356aceebe 460 Pfam PF02321 Outer membrane efflux protein 238 421 2.1E-31 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 SUPERFAMILY SSF81624 2 135 1.83E-36 T 13-10-2018 IPR035937 MutM-like, N-terminal Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 Gene3D G3DSA:3.20.190.10 2 129 2.1E-35 T 13-10-2018 IPR035937 MutM-like, N-terminal Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 Pfam PF06827 Zinc finger found in FPG and IleRS 242 270 2.4E-7 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 SMART SM00898 2 116 4.9E-42 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 SUPERFAMILY SSF46946 131 223 1.91E-27 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 13-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 9.6E-30 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 3.2E-85 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 SUPERFAMILY SSF57716 218 269 9.13E-16 T 13-10-2018 Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 2.1E-23 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 41.86 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 SMART SM01232 130 222 2.1E-43 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Atc_0468 3a2d23bd053ff985d1489975ebeec923 270 Gene3D G3DSA:1.10.8.50 132 270 1.4E-42 T 13-10-2018 Atc_2415 169e9826c21884b9fcd23d96ed1ea794 442 Gene3D G3DSA:3.40.980.20 255 440 1.2E-10 T 13-10-2018 Atc_2415 169e9826c21884b9fcd23d96ed1ea794 442 Gene3D G3DSA:3.40.50.10840 6 247 7.0E-22 T 13-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily Atc_2415 169e9826c21884b9fcd23d96ed1ea794 442 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 268 429 2.9E-32 T 13-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain Atc_2415 169e9826c21884b9fcd23d96ed1ea794 442 Pfam PF07005 Putative sugar-binding N-terminal domain 6 244 9.4E-60 T 13-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain Atc_2415 169e9826c21884b9fcd23d96ed1ea794 442 SUPERFAMILY SSF142764 6 437 4.84E-82 T 13-10-2018 Atc_0456 17ff00cfef2b7892f49167975525f173 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 288 2.1E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0456 17ff00cfef2b7892f49167975525f173 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 6.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0456 17ff00cfef2b7892f49167975525f173 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0456 17ff00cfef2b7892f49167975525f173 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 6.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0456 17ff00cfef2b7892f49167975525f173 452 Gene3D G3DSA:3.30.565.10 292 442 2.9E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0456 17ff00cfef2b7892f49167975525f173 452 Gene3D G3DSA:1.10.287.130 174 290 7.7E-16 T 13-10-2018 Atc_0456 17ff00cfef2b7892f49167975525f173 452 SUPERFAMILY SSF47384 209 288 4.71E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_0456 17ff00cfef2b7892f49167975525f173 452 SUPERFAMILY SSF55874 279 440 2.75E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0456 17ff00cfef2b7892f49167975525f173 452 SMART SM00388 224 289 8.8E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0456 17ff00cfef2b7892f49167975525f173 452 SMART SM00387 332 442 1.9E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0456 17ff00cfef2b7892f49167975525f173 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 433 3.3E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_1686 5b94cbf0835545509dcd32e1b8c6db87 241 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 100 238 1.5E-36 T 13-10-2018 IPR008136 CinA, C-terminal Atc_1686 5b94cbf0835545509dcd32e1b8c6db87 241 Gene3D G3DSA:3.90.950.20 85 240 1.6E-47 T 13-10-2018 IPR036653 CinA-like, C-terminal Atc_1686 5b94cbf0835545509dcd32e1b8c6db87 241 Pfam PF02464 Competence-damaged protein 97 238 5.5E-44 T 13-10-2018 IPR008136 CinA, C-terminal Atc_1686 5b94cbf0835545509dcd32e1b8c6db87 241 SUPERFAMILY SSF142433 88 240 1.05E-43 T 13-10-2018 IPR036653 CinA-like, C-terminal Atc_0482 f3c0536aa3c06acd003bd6e8b809ef22 290 SUPERFAMILY SSF54506 12 282 2.67E-52 T 13-10-2018 Atc_0482 f3c0536aa3c06acd003bd6e8b809ef22 290 Gene3D G3DSA:3.10.310.10 127 273 3.2E-98 T 13-10-2018 Atc_0482 f3c0536aa3c06acd003bd6e8b809ef22 290 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 13 286 37.528 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Atc_0482 f3c0536aa3c06acd003bd6e8b809ef22 290 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 76 90 - T 13-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Atc_0482 f3c0536aa3c06acd003bd6e8b809ef22 290 Gene3D G3DSA:3.10.310.10 15 282 3.2E-98 T 13-10-2018 Atc_0482 f3c0536aa3c06acd003bd6e8b809ef22 290 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 15 283 5.3E-87 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Atc_0482 f3c0536aa3c06acd003bd6e8b809ef22 290 Pfam PF01678 Diaminopimelate epimerase 15 134 2.8E-33 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Atc_0482 f3c0536aa3c06acd003bd6e8b809ef22 290 Pfam PF01678 Diaminopimelate epimerase 164 278 8.1E-25 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Atc_2185 569a13bf14e0f856237955b84a616457 223 SUPERFAMILY SSF56784 6 218 4.75E-53 T 13-10-2018 IPR036412 HAD-like superfamily Atc_2185 569a13bf14e0f856237955b84a616457 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 58 184 5.6E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_2185 569a13bf14e0f856237955b84a616457 223 Gene3D G3DSA:1.10.150.240 22 82 2.8E-31 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atc_2185 569a13bf14e0f856237955b84a616457 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.6E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_2185 569a13bf14e0f856237955b84a616457 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.6E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_2185 569a13bf14e0f856237955b84a616457 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 1.6E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_2185 569a13bf14e0f856237955b84a616457 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 180 4.4E-29 T 13-10-2018 Atc_2185 569a13bf14e0f856237955b84a616457 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 179 1.8E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_0081 27956024f92d72b47a855b7e8bba92fa 339 Pfam PF00591 Glycosyl transferase family, a/b domain 74 325 7.9E-91 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atc_0081 27956024f92d72b47a855b7e8bba92fa 339 Gene3D G3DSA:1.20.970.10 5 69 7.3E-24 T 13-10-2018 Atc_0081 27956024f92d72b47a855b7e8bba92fa 339 Gene3D G3DSA:3.40.1030.10 72 338 1.7E-105 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atc_0081 27956024f92d72b47a855b7e8bba92fa 339 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 332 3.0E-120 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Atc_0081 27956024f92d72b47a855b7e8bba92fa 339 SUPERFAMILY SSF47648 3 69 1.57E-19 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atc_0081 27956024f92d72b47a855b7e8bba92fa 339 SUPERFAMILY SSF52418 74 335 6.67E-91 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atc_0081 27956024f92d72b47a855b7e8bba92fa 339 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 335 37.706 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Atc_0081 27956024f92d72b47a855b7e8bba92fa 339 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 65 5.9E-19 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atc_2317 24c77838b1b2f86df305b3c08f515cb0 646 SUPERFAMILY SSF52540 192 600 1.29E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2317 24c77838b1b2f86df305b3c08f515cb0 646 Gene3D G3DSA:3.40.50.300 452 640 3.4E-33 T 13-10-2018 Atc_2317 24c77838b1b2f86df305b3c08f515cb0 646 Pfam PF13307 Helicase C-terminal domain 469 626 9.6E-34 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Atc_2317 24c77838b1b2f86df305b3c08f515cb0 646 SUPERFAMILY SSF52540 18 609 3.39E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2317 24c77838b1b2f86df305b3c08f515cb0 646 SMART SM00491 484 613 1.7E-40 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Atc_2317 24c77838b1b2f86df305b3c08f515cb0 646 Gene3D G3DSA:3.40.50.300 24 270 8.4E-42 T 13-10-2018 Atc_2317 24c77838b1b2f86df305b3c08f515cb0 646 Pfam PF06733 DEAD_2 180 251 9.0E-5 T 13-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 Atc_2317 24c77838b1b2f86df305b3c08f515cb0 646 SMART SM00487 23 298 0.0023 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_2482 e3f5ec7df77f42faa86252821dc2911e 153 Pfam PF09278 MerR, DNA binding 49 111 9.0E-21 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding Atc_2482 e3f5ec7df77f42faa86252821dc2911e 153 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_2482 e3f5ec7df77f42faa86252821dc2911e 153 Pfam PF00376 MerR family regulatory protein 6 43 3.0E-15 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_2482 e3f5ec7df77f42faa86252821dc2911e 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 1.1E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_2482 e3f5ec7df77f42faa86252821dc2911e 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 1.1E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_2482 e3f5ec7df77f42faa86252821dc2911e 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 1.1E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_2482 e3f5ec7df77f42faa86252821dc2911e 153 Gene3D G3DSA:1.10.1660.10 1 130 2.5E-37 T 13-10-2018 Atc_2482 e3f5ec7df77f42faa86252821dc2911e 153 SUPERFAMILY SSF46955 6 129 5.49E-36 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Atc_2482 e3f5ec7df77f42faa86252821dc2911e 153 SMART SM00422 5 74 1.8E-29 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_m196 41888ef326ed30c01bfac35e2fd300da 362 Gene3D G3DSA:3.40.50.1580 69 322 7.0E-24 T 13-10-2018 Atc_m196 41888ef326ed30c01bfac35e2fd300da 362 Pfam PF01048 Phosphorylase superfamily 78 287 5.6E-6 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Atc_m196 41888ef326ed30c01bfac35e2fd300da 362 SUPERFAMILY SSF53167 63 288 5.26E-13 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Atc_1421 78fd3d4fdff4e162bba315fa7c3eeea0 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 37 6.4E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_1421 78fd3d4fdff4e162bba315fa7c3eeea0 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_1421 78fd3d4fdff4e162bba315fa7c3eeea0 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 36 3.8E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_2510 75bf654c93db2c7c6bc3ccd32855666e 515 Gene3D G3DSA:1.25.40.80 135 323 2.1E-106 T 13-10-2018 Atc_2510 75bf654c93db2c7c6bc3ccd32855666e 515 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 9 232 5.2E-67 T 13-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein Atc_2510 75bf654c93db2c7c6bc3ccd32855666e 515 Gene3D G3DSA:1.10.579.10 327 447 8.6E-51 T 13-10-2018 Atc_2510 75bf654c93db2c7c6bc3ccd32855666e 515 SUPERFAMILY SSF48173 233 491 2.22E-51 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Atc_2510 75bf654c93db2c7c6bc3ccd32855666e 515 Gene3D G3DSA:3.40.50.620 10 234 2.1E-106 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2510 75bf654c93db2c7c6bc3ccd32855666e 515 Gene3D G3DSA:1.10.10.1710 448 514 9.5E-19 T 13-10-2018 Atc_1662 f7c04300f22a5de4429f9ea1f3dff9a6 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 181 264 5.4E-30 T 13-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Atc_1662 f7c04300f22a5de4429f9ea1f3dff9a6 267 SMART SM00382 31 152 0.0039 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1662 f7c04300f22a5de4429f9ea1f3dff9a6 267 Gene3D G3DSA:3.40.50.300 18 186 4.5E-28 T 13-10-2018 Atc_1662 f7c04300f22a5de4429f9ea1f3dff9a6 267 SUPERFAMILY SSF52540 13 203 3.74E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1662 f7c04300f22a5de4429f9ea1f3dff9a6 267 Pfam PF07728 AAA domain (dynein-related subfamily) 34 168 6.1E-30 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Atc_0921 0adc55ca186523550e22991e2b7c92a4 200 SUPERFAMILY SSF52833 4 197 7.47E-62 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0921 0adc55ca186523550e22991e2b7c92a4 200 Pfam PF00578 AhpC/TSA family 6 139 5.1E-32 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atc_0921 0adc55ca186523550e22991e2b7c92a4 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 4.9E-10 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atc_0921 0adc55ca186523550e22991e2b7c92a4 200 PIRSF PIRSF000239 1 200 3.8E-63 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atc_0921 0adc55ca186523550e22991e2b7c92a4 200 Gene3D G3DSA:3.40.30.10 1 197 2.6E-72 T 13-10-2018 Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 SUPERFAMILY SSF50615 10 80 1.67E-20 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 Gene3D G3DSA:2.40.10.170 9 81 1.4E-23 T 13-10-2018 Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 Gene3D G3DSA:1.10.1140.10 351 469 2.2E-60 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 Gene3D G3DSA:3.40.50.300 82 350 5.0E-110 T 13-10-2018 Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 Hamap MF_01347 ATP synthase subunit beta [atpB]. 9 466 55.602 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 14 79 2.0E-17 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 SUPERFAMILY SSF47917 351 467 7.59E-55 T 13-10-2018 Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 11 466 3.1E-246 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 136 348 5.1E-64 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 SMART SM00382 148 411 8.8E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 SUPERFAMILY SSF52540 83 353 9.0E-90 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0033 1687ff9a87d2e11b8b8bf2d88351320d 469 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_1335 b2ec23e960bb1d68f92977cb5e7f39b5 408 SUPERFAMILY SSF53383 4 392 1.24E-80 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_1335 b2ec23e960bb1d68f92977cb5e7f39b5 408 Pfam PF00155 Aminotransferase class I and II 30 387 7.4E-36 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atc_1335 b2ec23e960bb1d68f92977cb5e7f39b5 408 Gene3D G3DSA:3.40.640.10 42 289 8.7E-105 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_1335 b2ec23e960bb1d68f92977cb5e7f39b5 408 Gene3D G3DSA:3.90.1150.10 13 379 8.7E-105 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_1335 b2ec23e960bb1d68f92977cb5e7f39b5 408 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 391 2.7E-167 T 13-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 Atc_m217 d3e0294b2756d063d18d93c31b2cd45c 251 PIRSF PIRSF003073 1 251 2.2E-72 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_m217 d3e0294b2756d063d18d93c31b2cd45c 251 Gene3D G3DSA:3.40.50.300 61 248 7.6E-47 T 13-10-2018 Atc_m217 d3e0294b2756d063d18d93c31b2cd45c 251 Pfam PF01695 IstB-like ATP binding protein 56 230 7.4E-66 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_m217 d3e0294b2756d063d18d93c31b2cd45c 251 SUPERFAMILY SSF52540 65 240 5.01E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m217 d3e0294b2756d063d18d93c31b2cd45c 251 SMART SM00382 98 230 2.0E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_m217 d3e0294b2756d063d18d93c31b2cd45c 251 Pfam PF08483 IstB-like ATP binding N-terminal 24 52 2.6E-9 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal Atc_1731 8c1b7d0f3ff083fe1fdf19f091e99051 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 276 5.1E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atc_1731 8c1b7d0f3ff083fe1fdf19f091e99051 280 Gene3D G3DSA:1.10.3720.10 61 279 8.9E-29 T 13-10-2018 IPR035906 MetI-like superfamily Atc_1731 8c1b7d0f3ff083fe1fdf19f091e99051 280 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 13 276 4.2E-79 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Atc_1731 8c1b7d0f3ff083fe1fdf19f091e99051 280 SUPERFAMILY SSF161098 22 268 5.7E-31 T 13-10-2018 IPR035906 MetI-like superfamily Atc_2711 0546a7a8025184cc64b0dfbd70db54f2 245 Gene3D G3DSA:3.40.50.450 28 226 4.3E-63 T 13-10-2018 Atc_2711 0546a7a8025184cc64b0dfbd70db54f2 245 Pfam PF03641 Possible lysine decarboxylase 93 222 4.6E-32 T 13-10-2018 IPR031100 LOG family Atc_2711 0546a7a8025184cc64b0dfbd70db54f2 245 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 51 223 1.7E-43 T 13-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Atc_2711 0546a7a8025184cc64b0dfbd70db54f2 245 SUPERFAMILY SSF102405 24 224 2.75E-59 T 13-10-2018 Atc_0535 70e88eacaef636b7677acdb20f6d1195 292 SUPERFAMILY SSF54631 59 199 2.53E-32 T 13-10-2018 Atc_0535 70e88eacaef636b7677acdb20f6d1195 292 SMART SM01091 200 278 1.0E-25 T 13-10-2018 IPR005170 Transporter-associated domain Atc_0535 70e88eacaef636b7677acdb20f6d1195 292 SUPERFAMILY SSF56176 199 279 4.91E-21 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atc_0535 70e88eacaef636b7677acdb20f6d1195 292 SMART SM00116 136 184 1.5 T 13-10-2018 IPR000644 CBS domain Atc_0535 70e88eacaef636b7677acdb20f6d1195 292 SMART SM00116 73 122 0.3 T 13-10-2018 IPR000644 CBS domain Atc_0535 70e88eacaef636b7677acdb20f6d1195 292 Gene3D G3DSA:3.30.465.10 197 277 2.1E-23 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atc_0535 70e88eacaef636b7677acdb20f6d1195 292 Pfam PF03471 Transporter associated domain 202 276 2.9E-19 T 13-10-2018 IPR005170 Transporter-associated domain Atc_0535 70e88eacaef636b7677acdb20f6d1195 292 Pfam PF00571 CBS domain 136 184 2.7E-5 T 13-10-2018 IPR000644 CBS domain Atc_0535 70e88eacaef636b7677acdb20f6d1195 292 Pfam PF00571 CBS domain 64 120 2.4E-5 T 13-10-2018 IPR000644 CBS domain Atc_0535 70e88eacaef636b7677acdb20f6d1195 292 Gene3D G3DSA:3.10.580.10 46 192 1.6E-51 T 13-10-2018 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 Gene3D G3DSA:3.30.160.270 397 504 1.7E-11 T 13-10-2018 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 SUPERFAMILY SSF51569 3 293 1.13E-101 T 13-10-2018 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 4 512 43.764 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 SMART SM00917 371 503 2.5E-41 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 7 500 2.9E-223 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 14 30 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 201 214 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 Gene3D G3DSA:3.20.20.70 3 278 4.0E-111 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 SUPERFAMILY SSF110921 398 502 2.62E-25 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 503 1.0E-39 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 Pfam PF00682 HMGL-like 7 275 6.3E-101 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Atc_2403 b2e256ad9f8909ca51933ef47be1b675 513 Gene3D G3DSA:1.10.238.260 282 395 6.6E-37 T 13-10-2018 Atc_2206 012cd356bb618ead715513e661f657a6 200 Gene3D G3DSA:3.40.50.2020 8 185 2.3E-46 T 13-10-2018 Atc_2206 012cd356bb618ead715513e661f657a6 200 Pfam PF00156 Phosphoribosyl transferase domain 63 170 2.6E-14 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atc_2206 012cd356bb618ead715513e661f657a6 200 SUPERFAMILY SSF53271 18 173 2.23E-27 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Atc_2798 5dfe740c1584577520ed9373b353ae8b 129 SUPERFAMILY SSF54637 1 123 2.2E-35 T 13-10-2018 IPR029069 HotDog domain superfamily Atc_2798 5dfe740c1584577520ed9373b353ae8b 129 Gene3D G3DSA:3.10.129.10 1 128 7.2E-37 T 13-10-2018 Atc_2798 5dfe740c1584577520ed9373b353ae8b 129 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 1 111 1.5E-31 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Atc_2798 5dfe740c1584577520ed9373b353ae8b 129 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 2 19 - T 13-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 Atc_2798 5dfe740c1584577520ed9373b353ae8b 129 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 1 120 1.1E-45 T 13-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 Atc_2798 5dfe740c1584577520ed9373b353ae8b 129 Pfam PF03061 Thioesterase superfamily 11 96 1.3E-15 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Atc_2798 5dfe740c1584577520ed9373b353ae8b 129 PIRSF PIRSF003230 1 129 3.5E-41 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Atc_0379 d57dcfef37c95f7c3d6b1a6e0ef16b75 306 Gene3D G3DSA:2.40.440.10 20 299 1.5E-88 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_0379 d57dcfef37c95f7c3d6b1a6e0ef16b75 306 SUPERFAMILY SSF141523 93 231 7.85E-36 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_0379 d57dcfef37c95f7c3d6b1a6e0ef16b75 306 Pfam PF03734 L,D-transpeptidase catalytic domain 96 231 1.3E-24 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atc_0085 375e93a04ecbb3e9a7489e93496d80c5 208 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 48 208 5.5E-42 T 13-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 Atc_0085 375e93a04ecbb3e9a7489e93496d80c5 208 SUPERFAMILY SSF47240 49 181 6.81E-16 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_0085 375e93a04ecbb3e9a7489e93496d80c5 208 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 7 208 26.362 T 13-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 Atc_1332 ae2433771696f5932840752e00ec8b99 261 Gene3D G3DSA:2.40.40.10 74 166 1.7E-28 T 13-10-2018 IPR036908 RlpA-like domain superfamily Atc_1332 ae2433771696f5932840752e00ec8b99 261 SUPERFAMILY SSF50685 71 157 1.95E-9 T 13-10-2018 IPR036908 RlpA-like domain superfamily Atc_1332 ae2433771696f5932840752e00ec8b99 261 Pfam PF03330 Lytic transglycolase 75 161 5.1E-19 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Atc_1332 ae2433771696f5932840752e00ec8b99 261 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 33 165 20.379 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Atc_1332 ae2433771696f5932840752e00ec8b99 261 SUPERFAMILY SSF110997 186 259 3.4E-9 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Atc_1332 ae2433771696f5932840752e00ec8b99 261 Pfam PF05036 Sporulation related domain 187 253 8.7E-9 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Atc_1332 ae2433771696f5932840752e00ec8b99 261 Gene3D G3DSA:3.30.70.1070 188 260 1.5E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Atc_1332 ae2433771696f5932840752e00ec8b99 261 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 76 252 3.7E-30 T 13-10-2018 IPR012997 Rare lipoprotein A Atc_1317 8b3915ccd1b83923b3d157aa288e8bb9 135 Pfam PF01152 Bacterial-like globin 17 111 8.2E-10 T 13-10-2018 IPR001486 Truncated hemoglobin GO:0019825 Atc_1317 8b3915ccd1b83923b3d157aa288e8bb9 135 Gene3D G3DSA:1.10.490.10 17 134 4.9E-27 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Atc_1317 8b3915ccd1b83923b3d157aa288e8bb9 135 SUPERFAMILY SSF46458 20 128 5.77E-23 T 13-10-2018 IPR009050 Globin-like superfamily Atc_1540 9c33687e02340740ae4bb2da897ef2dc 315 Gene3D G3DSA:1.20.58.340 134 258 4.4E-14 T 13-10-2018 Atc_1540 9c33687e02340740ae4bb2da897ef2dc 315 Gene3D G3DSA:1.20.58.340 259 315 1.6E-8 T 13-10-2018 Atc_1540 9c33687e02340740ae4bb2da897ef2dc 315 SUPERFAMILY SSF144083 253 312 4.18E-12 T 13-10-2018 Atc_1540 9c33687e02340740ae4bb2da897ef2dc 315 SUPERFAMILY SSF143865 23 247 6.28E-30 T 13-10-2018 Atc_1540 9c33687e02340740ae4bb2da897ef2dc 315 Pfam PF01544 CorA-like Mg2+ transporter protein 27 311 1.9E-47 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Atc_1540 9c33687e02340740ae4bb2da897ef2dc 315 Gene3D G3DSA:3.30.460.20 16 132 1.7E-12 T 13-10-2018 Atc_2677 d1d102f512ccfff803f4c0b2b4a17ed7 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 78 2.1E-17 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atc_2677 d1d102f512ccfff803f4c0b2b4a17ed7 218 SUPERFAMILY SSF47616 77 197 1.5E-26 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atc_2677 d1d102f512ccfff803f4c0b2b4a17ed7 218 Gene3D G3DSA:1.20.1050.10 89 208 2.4E-24 T 13-10-2018 Atc_2677 d1d102f512ccfff803f4c0b2b4a17ed7 218 SUPERFAMILY SSF52833 1 100 4.9E-25 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2677 d1d102f512ccfff803f4c0b2b4a17ed7 218 Gene3D G3DSA:3.40.30.10 1 88 9.3E-28 T 13-10-2018 Atc_2677 d1d102f512ccfff803f4c0b2b4a17ed7 218 Pfam PF13410 Glutathione S-transferase, C-terminal domain 117 182 1.8E-10 T 13-10-2018 Atc_1860 71dd0aa4457a633816b3ab0dbbe784fb 435 Pfam PF00909 Ammonium Transporter Family 12 421 5.7E-84 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Atc_1860 71dd0aa4457a633816b3ab0dbbe784fb 435 Gene3D G3DSA:1.10.3430.10 1 432 7.9E-124 T 13-10-2018 IPR029020 Ammonium/urea transporter Atc_1860 71dd0aa4457a633816b3ab0dbbe784fb 435 SUPERFAMILY SSF111352 5 403 3.27E-98 T 13-10-2018 Atc_1860 71dd0aa4457a633816b3ab0dbbe784fb 435 ProSitePatterns PS01219 Ammonium transporters signature. 169 194 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Atc_1860 71dd0aa4457a633816b3ab0dbbe784fb 435 PRINTS PR00342 Rhesus blood group protein signature 208 226 7.8E-10 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Atc_1860 71dd0aa4457a633816b3ab0dbbe784fb 435 PRINTS PR00342 Rhesus blood group protein signature 332 348 7.8E-10 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Atc_1860 71dd0aa4457a633816b3ab0dbbe784fb 435 PRINTS PR00342 Rhesus blood group protein signature 113 129 7.8E-10 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Atc_1860 71dd0aa4457a633816b3ab0dbbe784fb 435 PRINTS PR00342 Rhesus blood group protein signature 239 261 7.8E-10 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Atc_1860 71dd0aa4457a633816b3ab0dbbe784fb 435 PRINTS PR00342 Rhesus blood group protein signature 294 312 7.8E-10 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Atc_1860 71dd0aa4457a633816b3ab0dbbe784fb 435 TIGRFAM TIGR00836 amt: ammonium transporter 10 421 2.4E-112 T 13-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Atc_1216 34fd651ccf4972df716ace41eb2cb0d5 1328 Pfam PF00271 Helicase conserved C-terminal domain 813 896 2.7E-9 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_1216 34fd651ccf4972df716ace41eb2cb0d5 1328 Gene3D G3DSA:3.40.50.300 776 913 9.1E-14 T 13-10-2018 Atc_1216 34fd651ccf4972df716ace41eb2cb0d5 1328 SMART SM00490 828 915 1.3E-4 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_1216 34fd651ccf4972df716ace41eb2cb0d5 1328 SUPERFAMILY SSF52540 792 895 2.34E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0913 51aca85f89e397c491524a4ff3f3dbd2 434 Pfam PF02347 Glycine cleavage system P-protein 1 425 1.7E-105 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Atc_0913 51aca85f89e397c491524a4ff3f3dbd2 434 Gene3D G3DSA:3.40.640.10 65 333 4.7E-136 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_0913 51aca85f89e397c491524a4ff3f3dbd2 434 Gene3D G3DSA:3.90.1150.10 54 428 4.7E-136 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_0913 51aca85f89e397c491524a4ff3f3dbd2 434 SUPERFAMILY SSF53383 1 431 1.57E-88 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_1636 e093de29c47b39161ae814482ed17e07 391 Pfam PF13533 Biotin-lipoyl like 68 116 6.8E-10 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Atc_1636 e093de29c47b39161ae814482ed17e07 391 Gene3D G3DSA:1.10.287.470 102 175 5.6E-74 T 13-10-2018 Atc_1636 e093de29c47b39161ae814482ed17e07 391 Gene3D G3DSA:2.40.30.170 56 298 5.6E-74 T 13-10-2018 Atc_1636 e093de29c47b39161ae814482ed17e07 391 Gene3D G3DSA:2.40.50.100 67 210 5.6E-74 T 13-10-2018 Atc_1636 e093de29c47b39161ae814482ed17e07 391 Pfam PF13437 HlyD family secretion protein 179 278 9.3E-6 T 13-10-2018 Atc_1636 e093de29c47b39161ae814482ed17e07 391 Gene3D G3DSA:2.40.420.20 299 364 5.6E-74 T 13-10-2018 Atc_1636 e093de29c47b39161ae814482ed17e07 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 367 2.7E-65 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_1636 e093de29c47b39161ae814482ed17e07 391 SUPERFAMILY SSF111369 57 293 5.36E-51 T 13-10-2018 Atc_1773 5e762e0c61bcebaa80182d54a806aaed 212 PIRSF PIRSF016482 1 211 7.8E-53 T 13-10-2018 IPR007445 Pilus assembly protein, PilO Atc_1773 5e762e0c61bcebaa80182d54a806aaed 212 Pfam PF04350 Pilus assembly protein, PilO 52 200 5.6E-50 T 13-10-2018 IPR007445 Pilus assembly protein, PilO Atc_1773 5e762e0c61bcebaa80182d54a806aaed 212 Gene3D G3DSA:3.30.70.60 94 211 2.9E-36 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Atc_2491 d46e079bd7f8168c348135a32ecd3777 181 SUPERFAMILY SSF53271 13 180 2.07E-40 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Atc_2491 d46e079bd7f8168c348135a32ecd3777 181 Pfam PF00156 Phosphoribosyl transferase domain 18 164 6.5E-19 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atc_2491 d46e079bd7f8168c348135a32ecd3777 181 Gene3D G3DSA:3.40.50.2020 5 181 1.7E-47 T 13-10-2018 Atc_1561 c8fbef743a4f29b1937042d86ff63b7f 251 Gene3D G3DSA:3.40.50.1110 99 251 2.4E-10 T 13-10-2018 IPR036514 SGNH hydrolase superfamily Atc_1561 c8fbef743a4f29b1937042d86ff63b7f 251 SUPERFAMILY SSF52266 81 248 2.82E-18 T 13-10-2018 Atc_0288 23e12e7892eff7b0290094e44d8c0cc2 311 Gene3D G3DSA:3.40.190.10 106 187 5.6E-24 T 13-10-2018 Atc_0288 23e12e7892eff7b0290094e44d8c0cc2 311 Gene3D G3DSA:3.40.190.10 190 259 3.1E-20 T 13-10-2018 Atc_0288 23e12e7892eff7b0290094e44d8c0cc2 311 SUPERFAMILY SSF53850 27 307 1.63E-39 T 13-10-2018 Atc_0288 23e12e7892eff7b0290094e44d8c0cc2 311 Pfam PF13531 Bacterial extracellular solute-binding protein 28 296 1.1E-50 T 13-10-2018 Atc_0288 23e12e7892eff7b0290094e44d8c0cc2 311 Gene3D G3DSA:3.40.190.10 260 295 3.1E-20 T 13-10-2018 Atc_0703 ebb2f44b86b5ef58033e1a22e2ffe3d7 187 SUPERFAMILY SSF52499 8 184 1.7E-39 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atc_0703 ebb2f44b86b5ef58033e1a22e2ffe3d7 187 Gene3D G3DSA:3.40.50.850 5 187 8.7E-47 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atc_0703 ebb2f44b86b5ef58033e1a22e2ffe3d7 187 Pfam PF00857 Isochorismatase family 15 163 6.1E-23 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 Atc_1008 b10b4a42a676830b0aef7fcd35dada5c 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 94 192 4.6E-18 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atc_1008 b10b4a42a676830b0aef7fcd35dada5c 205 Gene3D G3DSA:2.40.500.20 84 202 6.4E-26 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atc_1008 b10b4a42a676830b0aef7fcd35dada5c 205 SUPERFAMILY SSF54719 91 198 5.11E-26 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atc_1008 b10b4a42a676830b0aef7fcd35dada5c 205 Gene3D G3DSA:1.10.287.990 23 83 5.9E-5 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atc_1008 b10b4a42a676830b0aef7fcd35dada5c 205 SUPERFAMILY SSF46609 10 84 3.54E-12 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atc_0133 49857c562ed2f1f7d47096fa33d450f9 384 Pfam PF01548 Transposase 4 133 3.7E-27 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Atc_0133 49857c562ed2f1f7d47096fa33d450f9 384 Pfam PF02371 Transposase IS116/IS110/IS902 family 231 314 1.0E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Atc_2168 d9da4084bf7208ba4ae549361810ff25 172 Pfam PF02674 Colicin V production protein 7 137 2.3E-25 T 13-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Atc_1339 a37b4ef85529924391e30abd574f220f 345 Gene3D G3DSA:1.10.8.350 50 222 4.8E-72 T 13-10-2018 Atc_1339 a37b4ef85529924391e30abd574f220f 345 SUPERFAMILY SSF53955 39 340 2.06E-68 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_1339 a37b4ef85529924391e30abd574f220f 345 Pfam PF13406 Transglycosylase SLT domain 40 338 1.7E-75 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 Atc_1339 a37b4ef85529924391e30abd574f220f 345 Gene3D G3DSA:1.10.530.10 80 337 4.8E-72 T 13-10-2018 Atc_2248 3fe9140f92a007aa309e68febe9666e7 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 58 243 2.0E-9 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Atc_2248 3fe9140f92a007aa309e68febe9666e7 269 Gene3D G3DSA:3.60.10.10 10 252 8.0E-41 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atc_2248 3fe9140f92a007aa309e68febe9666e7 269 SUPERFAMILY SSF56219 6 255 1.44E-35 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atc_1716 461784e9a7c95124c2f6859f403164d0 534 PIRSF PIRSF006060 2 461 1.7E-62 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_1716 461784e9a7c95124c2f6859f403164d0 534 PIRSF PIRSF006060 449 520 960.0 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_1716 461784e9a7c95124c2f6859f403164d0 534 Pfam PF13520 Amino acid permease 16 443 9.7E-42 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_1716 461784e9a7c95124c2f6859f403164d0 534 Gene3D G3DSA:1.20.1740.10 8 462 9.7E-61 T 13-10-2018 Atc_2254 e03f2432f1e6d8e48ba510594cfa50b1 315 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 2 290 3.4E-47 T 13-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Atc_0855 4e1df990c356b9c37c9b762aa9782081 379 PIRSF PIRSF000390 17 379 1.0E-105 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Atc_0855 4e1df990c356b9c37c9b762aa9782081 379 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 35 373 2.0E-122 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Atc_0855 4e1df990c356b9c37c9b762aa9782081 379 SUPERFAMILY SSF53383 31 375 3.09E-107 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_0855 4e1df990c356b9c37c9b762aa9782081 379 Gene3D G3DSA:3.90.1150.10 261 378 9.9E-39 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_0855 4e1df990c356b9c37c9b762aa9782081 379 Gene3D G3DSA:3.40.640.10 11 257 2.7E-89 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_1914 79b5e4df58e69c3184366d13fbbf6828 209 Gene3D G3DSA:3.40.30.10 66 204 1.8E-24 T 13-10-2018 Atc_1914 79b5e4df58e69c3184366d13fbbf6828 209 SUPERFAMILY SSF52833 50 195 3.91E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1914 79b5e4df58e69c3184366d13fbbf6828 209 Pfam PF13098 Thioredoxin-like domain 69 187 2.4E-8 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_0539 79b5e4df58e69c3184366d13fbbf6828 209 Gene3D G3DSA:3.40.30.10 66 204 1.8E-24 T 13-10-2018 Atc_0539 79b5e4df58e69c3184366d13fbbf6828 209 SUPERFAMILY SSF52833 50 195 3.91E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0539 79b5e4df58e69c3184366d13fbbf6828 209 Pfam PF13098 Thioredoxin-like domain 69 187 2.4E-8 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_0095 3856912c1318cec798692ba1bc253839 1130 SUPERFAMILY SSF52540 22 1077 3.47E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0095 3856912c1318cec798692ba1bc253839 1130 Pfam PF13555 P-loop containing region of AAA domain 22 82 3.4E-24 T 13-10-2018 Atc_0095 3856912c1318cec798692ba1bc253839 1130 Pfam PF13558 Putative exonuclease SbcCD, C subunit 977 1067 6.1E-23 T 13-10-2018 Atc_0095 3856912c1318cec798692ba1bc253839 1130 Gene3D G3DSA:3.40.1140.10 18 200 3.4E-7 T 13-10-2018 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 Gene3D G3DSA:3.40.50.1480 8 202 2.7E-95 T 13-10-2018 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 SMART SM00997 196 380 5.3E-84 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 460 44.867 T 13-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 460 2.4E-158 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 Gene3D G3DSA:3.40.50.1480 379 468 2.2E-30 T 13-10-2018 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 PIRSF PIRSF001109 2 468 4.4E-181 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 218 235 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 SUPERFAMILY SSF51735 196 381 7.05E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 146 9.3E-74 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 SUPERFAMILY SSF52283 8 468 1.76E-111 T 13-10-2018 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 196 380 3.6E-56 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 Gene3D G3DSA:3.40.50.720 203 378 1.4E-69 T 13-10-2018 Atc_0334 20ff5c27f6b0addb6be945eabdbe7901 468 SMART SM00996 10 467 6.7E-280 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atc_m017 7433d8f061fcf01138a3b85c58fdc025 222 Pfam PF13817 IS66 C-terminal element 179 216 1.3E-16 T 13-10-2018 IPR039552 Transposase IS66, C-terminal Atc_m017 7433d8f061fcf01138a3b85c58fdc025 222 Pfam PF03050 Transposase IS66 family 21 172 7.6E-52 T 13-10-2018 IPR004291 Transposase, IS66 Atc_2418 6ed2b15efbf16dc33760bb82b581caae 469 SUPERFAMILY SSF103473 44 440 5.1E-42 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_2418 6ed2b15efbf16dc33760bb82b581caae 469 Pfam PF07690 Major Facilitator Superfamily 59 402 1.8E-20 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_2418 6ed2b15efbf16dc33760bb82b581caae 469 Gene3D G3DSA:1.20.1250.20 44 238 3.9E-15 T 13-10-2018 Atc_2418 6ed2b15efbf16dc33760bb82b581caae 469 Gene3D G3DSA:1.20.1250.20 244 444 7.5E-19 T 13-10-2018 Atc_1678 f90807027f09d9c4e92a7ba31e28155e 260 SUPERFAMILY SSF110399 5 246 9.16E-86 T 13-10-2018 Atc_1678 f90807027f09d9c4e92a7ba31e28155e 260 Hamap MF_00443 Thiazole synthase [thiG]. 6 260 41.955 T 13-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Atc_1678 f90807027f09d9c4e92a7ba31e28155e 260 Gene3D G3DSA:3.20.20.70 1 259 6.1E-115 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_1678 f90807027f09d9c4e92a7ba31e28155e 260 Pfam PF05690 Thiazole biosynthesis protein ThiG 9 254 3.4E-109 T 13-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Atc_2389 6b31ae107a284c580baeaad25d75743a 695 SUPERFAMILY SSF109604 351 491 2.51E-16 T 13-10-2018 Atc_2389 6b31ae107a284c580baeaad25d75743a 695 Pfam PF05746 DALR anticodon binding domain 586 682 2.3E-5 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Atc_2389 6b31ae107a284c580baeaad25d75743a 695 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 4 692 4.8E-206 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2389 6b31ae107a284c580baeaad25d75743a 695 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 553 1.2E-187 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2389 6b31ae107a284c580baeaad25d75743a 695 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 691 23.417 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2389 6b31ae107a284c580baeaad25d75743a 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 3.0E-31 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2389 6b31ae107a284c580baeaad25d75743a 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 3.0E-31 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2389 6b31ae107a284c580baeaad25d75743a 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 3.0E-31 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2389 6b31ae107a284c580baeaad25d75743a 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 3.0E-31 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2389 6b31ae107a284c580baeaad25d75743a 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 51 63 3.0E-31 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2776 45b27d33d11784fc552e874e11fc5a2c 114 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 1 109 2.5E-25 T 13-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Atc_2776 45b27d33d11784fc552e874e11fc5a2c 114 SMART SM00905 1 109 4.5E-38 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Atc_2776 45b27d33d11784fc552e874e11fc5a2c 114 Gene3D G3DSA:3.30.1130.10 1 114 1.0E-36 T 13-10-2018 Atc_2776 45b27d33d11784fc552e874e11fc5a2c 114 TIGRFAM TIGR00526 folB_dom: FolB domain 1 112 3.0E-29 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Atc_2776 45b27d33d11784fc552e874e11fc5a2c 114 Pfam PF02152 Dihydroneopterin aldolase 1 108 2.3E-31 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Atc_2776 45b27d33d11784fc552e874e11fc5a2c 114 SUPERFAMILY SSF55620 1 111 1.0E-31 T 13-10-2018 Atc_1897 338c54e322e2bcc29e9377646f676480 68 Pfam PF09851 Short C-terminal domain 41 66 2.3E-10 T 13-10-2018 IPR018649 SHOCT domain Atc_0556 338c54e322e2bcc29e9377646f676480 68 Pfam PF09851 Short C-terminal domain 41 66 2.3E-10 T 13-10-2018 IPR018649 SHOCT domain Atc_0987 e4bb5f6ea4df5cd08fa17bb328b53a83 172 Pfam PF01152 Bacterial-like globin 57 163 3.7E-12 T 13-10-2018 IPR001486 Truncated hemoglobin GO:0019825 Atc_0987 e4bb5f6ea4df5cd08fa17bb328b53a83 172 Gene3D G3DSA:1.10.490.10 48 169 2.6E-31 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Atc_0987 e4bb5f6ea4df5cd08fa17bb328b53a83 172 SUPERFAMILY SSF46458 54 166 4.32E-24 T 13-10-2018 IPR009050 Globin-like superfamily Atc_1510 1a56ab7ca83502dc53885f0992be8148 202 Gene3D G3DSA:3.40.50.300 6 194 5.6E-31 T 13-10-2018 Atc_1510 1a56ab7ca83502dc53885f0992be8148 202 SUPERFAMILY SSF52540 1 172 1.02E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1510 1a56ab7ca83502dc53885f0992be8148 202 Pfam PF01712 Deoxynucleoside kinase 7 195 4.9E-23 T 13-10-2018 IPR031314 Deoxynucleoside kinase domain Atc_1510 1a56ab7ca83502dc53885f0992be8148 202 PIRSF PIRSF000705 1 201 6.5E-33 T 13-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 Atc_0369 f6f5ba57f3303b9f5eed14db92e04f81 183 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 12 181 1.4E-33 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Atc_0369 f6f5ba57f3303b9f5eed14db92e04f81 183 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 181 3.1E-23 T 13-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Atc_m234 848c6a856756adc852e1cc5ed830122f 340 Pfam PF05598 Transposase domain (DUF772) 58 130 5.3E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_m234 848c6a856756adc852e1cc5ed830122f 340 Pfam PF01609 Transposase DDE domain 145 332 9.4E-29 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1100 848c6a856756adc852e1cc5ed830122f 340 Pfam PF05598 Transposase domain (DUF772) 58 130 5.3E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1100 848c6a856756adc852e1cc5ed830122f 340 Pfam PF01609 Transposase DDE domain 145 332 9.4E-29 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_m202 848c6a856756adc852e1cc5ed830122f 340 Pfam PF05598 Transposase domain (DUF772) 58 130 5.3E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_m202 848c6a856756adc852e1cc5ed830122f 340 Pfam PF01609 Transposase DDE domain 145 332 9.4E-29 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1436 1a330cc0079b03517d539b435ff81a80 392 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 80 129 9.7E-16 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1436 1a330cc0079b03517d539b435ff81a80 392 Pfam PF01610 Transposase 144 378 1.1E-73 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1436 1a330cc0079b03517d539b435ff81a80 392 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 31 74 3.1E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0735 eea066b8ca49694167653c6261752ab4 284 Gene3D G3DSA:3.60.21.10 9 275 6.0E-62 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Atc_0735 eea066b8ca49694167653c6261752ab4 284 SUPERFAMILY SSF56300 11 259 2.06E-43 T 13-10-2018 Atc_0735 eea066b8ca49694167653c6261752ab4 284 Pfam PF00149 Calcineurin-like phosphoesterase 12 86 1.1E-8 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atc_0735 eea066b8ca49694167653c6261752ab4 284 PIRSF PIRSF000903 8 279 1.6E-73 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Atc_2593 6dffa6ecf0af9120b8eab0f0a2f9f3ab 210 Pfam PF13098 Thioredoxin-like domain 54 153 4.7E-8 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_2593 6dffa6ecf0af9120b8eab0f0a2f9f3ab 210 Gene3D G3DSA:3.40.30.10 50 210 6.3E-23 T 13-10-2018 Atc_2593 6dffa6ecf0af9120b8eab0f0a2f9f3ab 210 SUPERFAMILY SSF52833 43 133 2.96E-15 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2276 b0e17128ca7815332f046a6477510a48 516 Gene3D G3DSA:2.60.40.10 417 514 5.4E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold Atc_2276 b0e17128ca7815332f046a6477510a48 516 SUPERFAMILY SSF81296 407 508 1.02E-13 T 13-10-2018 IPR014756 Immunoglobulin E-set Atc_2276 b0e17128ca7815332f046a6477510a48 516 PIRSF PIRSF006281 26 511 9.0E-153 T 13-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD Atc_2276 b0e17128ca7815332f046a6477510a48 516 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 36 506 1.5E-160 T 13-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 Atc_2276 b0e17128ca7815332f046a6477510a48 516 Gene3D G3DSA:2.70.98.10 35 406 1.0E-136 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Atc_2276 b0e17128ca7815332f046a6477510a48 516 SUPERFAMILY SSF74650 36 403 1.6E-126 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atc_1499 d2a7e4dddc30899827eb14977d23e96f 277 Gene3D G3DSA:3.40.50.300 7 247 1.9E-56 T 13-10-2018 Atc_1499 d2a7e4dddc30899827eb14977d23e96f 277 SUPERFAMILY SSF52540 9 267 9.35E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1499 d2a7e4dddc30899827eb14977d23e96f 277 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 221 2.3E-16 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_1499 d2a7e4dddc30899827eb14977d23e96f 277 PIRSF PIRSF003092 1 273 2.7E-78 T 13-10-2018 IPR025501 ATP binding protein MinD Atc_0028 816916096027a9136f0e1db2ad8edf2e 84 Gene3D G3DSA:1.20.20.10 1 84 1.7E-25 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0028 816916096027a9136f0e1db2ad8edf2e 84 Pfam PF00137 ATP synthase subunit C 13 74 4.6E-10 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Atc_0028 816916096027a9136f0e1db2ad8edf2e 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 42 63 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0028 816916096027a9136f0e1db2ad8edf2e 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 22 79 2.7E-18 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Atc_0028 816916096027a9136f0e1db2ad8edf2e 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 77 13.15 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0028 816916096027a9136f0e1db2ad8edf2e 84 SUPERFAMILY SSF81333 5 81 1.83E-17 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Atc_1749 909c198fb618e3e385c3558ad3eebdff 361 Gene3D G3DSA:2.40.420.20 282 340 1.7E-67 T 13-10-2018 Atc_1749 909c198fb618e3e385c3558ad3eebdff 361 Gene3D G3DSA:2.40.30.170 54 281 1.7E-67 T 13-10-2018 Atc_1749 909c198fb618e3e385c3558ad3eebdff 361 SUPERFAMILY SSF111369 55 277 6.93E-31 T 13-10-2018 Atc_1749 909c198fb618e3e385c3558ad3eebdff 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 264 5.2E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_1749 909c198fb618e3e385c3558ad3eebdff 361 Gene3D G3DSA:1.10.287.470 99 170 1.7E-67 T 13-10-2018 Atc_1749 909c198fb618e3e385c3558ad3eebdff 361 Gene3D G3DSA:2.40.50.100 65 205 1.7E-67 T 13-10-2018 Atc_1749 909c198fb618e3e385c3558ad3eebdff 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 354 7.3E-71 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_1720 b5edc530b1390ef5e8cf956c9b166506 993 Pfam PF02811 PHP domain 1 75 1.7E-8 T 13-10-2018 IPR004013 PHP domain GO:0003824 Atc_1720 b5edc530b1390ef5e8cf956c9b166506 993 Pfam PF01336 OB-fold nucleic acid binding domain 904 976 9.7E-7 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Atc_1720 b5edc530b1390ef5e8cf956c9b166506 993 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 250 667 2.0E-137 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_1720 b5edc530b1390ef5e8cf956c9b166506 993 Pfam PF14579 Helix-hairpin-helix motif 741 825 4.4E-15 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_1720 b5edc530b1390ef5e8cf956c9b166506 993 Gene3D G3DSA:3.20.20.140 1 228 6.2E-32 T 13-10-2018 Atc_1720 b5edc530b1390ef5e8cf956c9b166506 993 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 1 993 12.5 T 13-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_1720 b5edc530b1390ef5e8cf956c9b166506 993 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 152 938 8.8E-132 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_2774 9c91f53024aa11a8d4a07e7151006239 454 Pfam PF04055 Radical SAM superfamily 151 328 5.1E-25 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_2774 9c91f53024aa11a8d4a07e7151006239 454 Gene3D G3DSA:3.40.50.12160 13 131 6.5E-25 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Atc_2774 9c91f53024aa11a8d4a07e7151006239 454 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 12 448 56.75 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Atc_2774 9c91f53024aa11a8d4a07e7151006239 454 Gene3D G3DSA:3.80.30.20 143 384 4.9E-69 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Atc_2774 9c91f53024aa11a8d4a07e7151006239 454 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 14 446 1.0E-94 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Atc_2774 9c91f53024aa11a8d4a07e7151006239 454 SUPERFAMILY SSF102114 128 375 4.19E-46 T 13-10-2018 Atc_2774 9c91f53024aa11a8d4a07e7151006239 454 Gene3D G3DSA:2.40.50.140 385 453 3.9E-8 T 13-10-2018 Atc_2774 9c91f53024aa11a8d4a07e7151006239 454 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Atc_2774 9c91f53024aa11a8d4a07e7151006239 454 SMART SM00729 145 370 7.9E-48 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atc_2774 9c91f53024aa11a8d4a07e7151006239 454 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 13 446 3.5E-152 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Atc_2774 9c91f53024aa11a8d4a07e7151006239 454 Pfam PF00919 Uncharacterized protein family UPF0004 13 106 3.5E-20 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Atc_1331 7525c5f0ea65d89bec1c5dd5eb8f8c34 331 Gene3D G3DSA:3.40.50.300 10 248 7.2E-67 T 13-10-2018 Atc_1331 7525c5f0ea65d89bec1c5dd5eb8f8c34 331 SUPERFAMILY SSF52540 13 310 3.15E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1331 7525c5f0ea65d89bec1c5dd5eb8f8c34 331 Pfam PF13469 Sulfotransferase family 17 211 1.4E-15 T 13-10-2018 Atc_1557 cb5634ff495589bcb6e10fa7a5b58104 307 Pfam PF00691 OmpA family 169 254 6.6E-13 T 13-10-2018 IPR006665 OmpA-like domain Atc_1557 cb5634ff495589bcb6e10fa7a5b58104 307 SUPERFAMILY SSF103088 162 273 4.32E-21 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_1557 cb5634ff495589bcb6e10fa7a5b58104 307 Gene3D G3DSA:3.30.1330.60 116 303 7.5E-52 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_1557 cb5634ff495589bcb6e10fa7a5b58104 307 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 16 64 2.1E-17 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain Atc_2204 9f5fd21417ae44e9bc482cabbbe9629b 96 SMART SM00883 2 94 1.6E-59 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atc_2204 9f5fd21417ae44e9bc482cabbbe9629b 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.7E-33 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atc_2204 9f5fd21417ae44e9bc482cabbbe9629b 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.7E-33 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atc_2204 9f5fd21417ae44e9bc482cabbbe9629b 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.7E-33 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atc_2204 9f5fd21417ae44e9bc482cabbbe9629b 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.7E-33 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atc_2204 9f5fd21417ae44e9bc482cabbbe9629b 96 SUPERFAMILY SSF50129 1 94 1.01E-35 T 13-10-2018 IPR011032 GroES-like superfamily Atc_2204 9f5fd21417ae44e9bc482cabbbe9629b 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.9E-35 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atc_2204 9f5fd21417ae44e9bc482cabbbe9629b 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Atc_2204 9f5fd21417ae44e9bc482cabbbe9629b 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.723 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atc_2204 9f5fd21417ae44e9bc482cabbbe9629b 96 Gene3D G3DSA:2.30.33.40 1 96 1.4E-39 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Atc_2478 df13044df1c8e700eec1f4ceff4e716d 794 Gene3D G3DSA:3.40.50.300 410 708 1.4E-116 T 13-10-2018 Atc_2478 df13044df1c8e700eec1f4ceff4e716d 794 Gene3D G3DSA:3.30.980.40 304 409 2.0E-29 T 13-10-2018 Atc_2478 df13044df1c8e700eec1f4ceff4e716d 794 SUPERFAMILY SSF46785 723 786 2.58E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_2478 df13044df1c8e700eec1f4ceff4e716d 794 SMART SM00843 723 788 6.1E-36 T 13-10-2018 IPR018541 FtsK gamma domain Atc_2478 df13044df1c8e700eec1f4ceff4e716d 794 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 31 192 9.7E-32 T 13-10-2018 IPR025199 DNA translocase FtsK, 4TM region Atc_2478 df13044df1c8e700eec1f4ceff4e716d 794 SUPERFAMILY SSF52540 398 694 7.97E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2478 df13044df1c8e700eec1f4ceff4e716d 794 Gene3D G3DSA:1.10.10.10 719 783 7.5E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2478 df13044df1c8e700eec1f4ceff4e716d 794 Pfam PF09397 Ftsk gamma domain 725 784 2.3E-25 T 13-10-2018 IPR018541 FtsK gamma domain Atc_2478 df13044df1c8e700eec1f4ceff4e716d 794 Pfam PF01580 FtsK/SpoIIIE family 413 622 5.1E-64 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Atc_0041 adac880c341d6c530a58507e824716b2 915 PIRSF PIRSF029570 8 913 2.2E-238 T 13-10-2018 IPR016925 Uncharacterised conserved protein UCP029570 Atc_0041 adac880c341d6c530a58507e824716b2 915 Gene3D G3DSA:3.20.20.70 59 291 2.4E-20 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0041 adac880c341d6c530a58507e824716b2 915 Pfam PF03537 Glycoside-hydrolase family GH114 67 270 3.0E-18 T 13-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain Atc_0041 adac880c341d6c530a58507e824716b2 915 SUPERFAMILY SSF51445 66 282 2.63E-29 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Atc_0041 adac880c341d6c530a58507e824716b2 915 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 123 142 2.9E-8 T 13-10-2018 IPR016062 Hypothetical protein TM1410-related Atc_0041 adac880c341d6c530a58507e824716b2 915 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 253 265 2.9E-8 T 13-10-2018 IPR016062 Hypothetical protein TM1410-related Atc_0041 adac880c341d6c530a58507e824716b2 915 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 230 240 2.9E-8 T 13-10-2018 IPR016062 Hypothetical protein TM1410-related Atc_0041 adac880c341d6c530a58507e824716b2 915 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 67 86 2.9E-8 T 13-10-2018 IPR016062 Hypothetical protein TM1410-related Atc_1251 4dce1efeeb865bbd12cf8f1d8ee9f2c4 578 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 44 56 8.0E-21 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Atc_1251 4dce1efeeb865bbd12cf8f1d8ee9f2c4 578 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 98 117 8.0E-21 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Atc_1251 4dce1efeeb865bbd12cf8f1d8ee9f2c4 578 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 325 339 8.0E-21 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Atc_1251 4dce1efeeb865bbd12cf8f1d8ee9f2c4 578 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 302 324 8.0E-21 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Atc_1251 4dce1efeeb865bbd12cf8f1d8ee9f2c4 578 SUPERFAMILY SSF53335 19 380 1.75E-67 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1251 4dce1efeeb865bbd12cf8f1d8ee9f2c4 578 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 47 53 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_1251 4dce1efeeb865bbd12cf8f1d8ee9f2c4 578 PIRSF PIRSF015855 11 391 5.6E-99 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Atc_1251 4dce1efeeb865bbd12cf8f1d8ee9f2c4 578 Pfam PF01555 DNA methylase 44 362 5.7E-42 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Atc_2407 0ab82c0abc9bb3440b3b8a226d872467 766 Pfam PF00593 TonB dependent receptor 277 764 1.0E-38 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atc_2407 0ab82c0abc9bb3440b3b8a226d872467 766 SUPERFAMILY SSF56935 52 766 2.86E-76 T 13-10-2018 Atc_2407 0ab82c0abc9bb3440b3b8a226d872467 766 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 157 2.1E-8 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Atc_2407 0ab82c0abc9bb3440b3b8a226d872467 766 Gene3D G3DSA:2.170.130.10 56 180 3.2E-13 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atc_2401 293594c308a040f6fabb466027684474 112 Gene3D G3DSA:3.40.30.10 1 105 9.4E-10 T 13-10-2018 Atc_2401 293594c308a040f6fabb466027684474 112 SUPERFAMILY SSF52833 4 111 1.19E-13 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2401 293594c308a040f6fabb466027684474 112 Pfam PF00085 Thioredoxin 3 102 5.3E-8 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Atc_2161 31c52ca1f0d208c5cf292923c19de132 112 Pfam PF02699 Preprotein translocase subunit 26 101 3.0E-27 T 13-10-2018 IPR003849 Preprotein translocase YajC Atc_2161 31c52ca1f0d208c5cf292923c19de132 112 SMART SM01323 22 104 5.7E-39 T 13-10-2018 IPR003849 Preprotein translocase YajC Atc_2161 31c52ca1f0d208c5cf292923c19de132 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 24 104 4.2E-26 T 13-10-2018 IPR003849 Preprotein translocase YajC Atc_2161 31c52ca1f0d208c5cf292923c19de132 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 24 44 1.2E-15 T 13-10-2018 IPR003849 Preprotein translocase YajC Atc_2161 31c52ca1f0d208c5cf292923c19de132 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 62 80 1.2E-15 T 13-10-2018 IPR003849 Preprotein translocase YajC Atc_0205 040a8147559beb874c2864b15e991e61 691 Pfam PF04932 O-Antigen ligase 210 350 1.5E-11 T 13-10-2018 IPR007016 O-antigen ligase-related Atc_0205 040a8147559beb874c2864b15e991e61 691 Gene3D G3DSA:1.25.40.10 493 686 1.5E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2176 ced743b6c2b005529e44555a20b9fbcb 340 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 5 336 36.586 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atc_2176 ced743b6c2b005529e44555a20b9fbcb 340 SUPERFAMILY SSF55347 132 323 3.57E-72 T 13-10-2018 Atc_2176 ced743b6c2b005529e44555a20b9fbcb 340 PIRSF PIRSF000148 5 340 1.4E-131 T 13-10-2018 Atc_2176 ced743b6c2b005529e44555a20b9fbcb 340 SMART SM00859 7 122 2.0E-43 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Atc_2176 ced743b6c2b005529e44555a20b9fbcb 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 322 8.6E-54 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atc_2176 ced743b6c2b005529e44555a20b9fbcb 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 121 1.9E-31 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Atc_2176 ced743b6c2b005529e44555a20b9fbcb 340 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 337 4.3E-138 T 13-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atc_2176 ced743b6c2b005529e44555a20b9fbcb 340 Gene3D G3DSA:3.40.50.720 8 334 1.4E-141 T 13-10-2018 Atc_2176 ced743b6c2b005529e44555a20b9fbcb 340 Gene3D G3DSA:3.30.360.10 131 319 1.4E-141 T 13-10-2018 Atc_2176 ced743b6c2b005529e44555a20b9fbcb 340 SUPERFAMILY SSF51735 6 160 5.36E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1589 a9967fe4db0e6750829d8b5a3ed7ce25 340 Pfam PF05598 Transposase domain (DUF772) 58 130 5.7E-21 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1589 a9967fe4db0e6750829d8b5a3ed7ce25 340 Pfam PF01609 Transposase DDE domain 145 332 2.0E-29 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1705 ec33fdfdac3afa2aedeb3ef1430c8903 435 SUPERFAMILY SSF51905 3 341 5.86E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1705 ec33fdfdac3afa2aedeb3ef1430c8903 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 2.6E-6 T 13-10-2018 Atc_1705 ec33fdfdac3afa2aedeb3ef1430c8903 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.6E-6 T 13-10-2018 Atc_1705 ec33fdfdac3afa2aedeb3ef1430c8903 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 2.6E-6 T 13-10-2018 Atc_1705 ec33fdfdac3afa2aedeb3ef1430c8903 435 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 130 2.3E-12 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_1705 ec33fdfdac3afa2aedeb3ef1430c8903 435 Gene3D G3DSA:3.50.50.100 1 418 1.1E-176 T 13-10-2018 Atc_1705 ec33fdfdac3afa2aedeb3ef1430c8903 435 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 210 301 3.3E-6 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_2707 cecbc46dbc12b9acfee588554cecafa5 199 SUPERFAMILY SSF81342 14 194 1.26E-12 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Atc_2707 cecbc46dbc12b9acfee588554cecafa5 199 Pfam PF01292 Prokaryotic cytochrome b561 16 193 6.0E-16 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Atc_2246 ff57e652876eba278e5213a925ba64ec 254 Gene3D G3DSA:3.40.50.720 6 253 2.4E-84 T 13-10-2018 Atc_2246 ff57e652876eba278e5213a925ba64ec 254 Pfam PF00899 ThiF family 13 251 2.0E-57 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Atc_2246 ff57e652876eba278e5213a925ba64ec 254 SUPERFAMILY SSF69572 6 250 6.02E-78 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Atc_1732 4f6ba4953ac37e661933f942924cab82 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 288 1.3E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atc_1732 4f6ba4953ac37e661933f942924cab82 302 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 2 292 4.2E-87 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Atc_1732 4f6ba4953ac37e661933f942924cab82 302 Gene3D G3DSA:1.10.3720.10 54 297 4.8E-29 T 13-10-2018 IPR035906 MetI-like superfamily Atc_1732 4f6ba4953ac37e661933f942924cab82 302 SUPERFAMILY SSF161098 8 284 4.84E-30 T 13-10-2018 IPR035906 MetI-like superfamily Atc_0795 f1776da70adb134072e1640b7f7c800b 374 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 275 8.4E-13 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_0795 f1776da70adb134072e1640b7f7c800b 374 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 152 356 1.6E-28 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_0795 f1776da70adb134072e1640b7f7c800b 374 Gene3D G3DSA:2.40.30.170 46 292 7.5E-38 T 13-10-2018 Atc_0795 f1776da70adb134072e1640b7f7c800b 374 Gene3D G3DSA:2.40.50.100 52 216 7.5E-38 T 13-10-2018 Atc_0795 f1776da70adb134072e1640b7f7c800b 374 Gene3D G3DSA:1.10.287.470 86 179 7.5E-38 T 13-10-2018 Atc_0795 f1776da70adb134072e1640b7f7c800b 374 Gene3D G3DSA:2.40.420.20 293 353 7.5E-38 T 13-10-2018 Atc_0795 f1776da70adb134072e1640b7f7c800b 374 SUPERFAMILY SSF111369 46 291 2.75E-7 T 13-10-2018 Atc_m246 1a633d243f283ab76e61a366a5f7e6f4 444 Pfam PF07804 HipA-like C-terminal domain 174 383 1.4E-40 T 13-10-2018 IPR012893 HipA-like, C-terminal Atc_m246 1a633d243f283ab76e61a366a5f7e6f4 444 Pfam PF13657 HipA N-terminal domain 16 110 4.3E-11 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 Atc_m046 1a633d243f283ab76e61a366a5f7e6f4 444 Pfam PF07804 HipA-like C-terminal domain 174 383 1.4E-40 T 13-10-2018 IPR012893 HipA-like, C-terminal Atc_m046 1a633d243f283ab76e61a366a5f7e6f4 444 Pfam PF13657 HipA N-terminal domain 16 110 4.3E-11 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 Atc_1609 ad44374f6ff079ee0768fa8d1746ff26 235 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 126 7.7E-8 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atc_1609 ad44374f6ff079ee0768fa8d1746ff26 235 Gene3D G3DSA:3.40.50.720 3 235 3.8E-17 T 13-10-2018 Atc_1609 ad44374f6ff079ee0768fa8d1746ff26 235 SUPERFAMILY SSF51735 2 179 2.12E-19 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0245 3acdf94e66940738264a1fcadd9bd876 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 372 401 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site Atc_0245 3acdf94e66940738264a1fcadd9bd876 440 SUPERFAMILY SSF50249 13 64 6.85E-12 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0245 3acdf94e66940738264a1fcadd9bd876 440 Gene3D G3DSA:2.40.50.140 4 83 8.3E-23 T 13-10-2018 Atc_0245 3acdf94e66940738264a1fcadd9bd876 440 Gene3D G3DSA:3.40.1350.30 131 272 7.9E-94 T 13-10-2018 Atc_0245 3acdf94e66940738264a1fcadd9bd876 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 262 439 3.6E-16 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Atc_0245 3acdf94e66940738264a1fcadd9bd876 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 14 440 60.802 T 13-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 Atc_0245 3acdf94e66940738264a1fcadd9bd876 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 433 2.8E-82 T 13-10-2018 Atc_0245 3acdf94e66940738264a1fcadd9bd876 440 Gene3D G3DSA:3.40.50.150 84 435 7.9E-94 T 13-10-2018 Atc_0245 3acdf94e66940738264a1fcadd9bd876 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 423 433 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Atc_0245 3acdf94e66940738264a1fcadd9bd876 440 SUPERFAMILY SSF53335 72 440 9.06E-69 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1690 d8bc035c456710a3d1bbcaea710b31ea 116 Gene3D G3DSA:3.30.450.30 5 115 3.8E-6 T 13-10-2018 Atc_1690 d8bc035c456710a3d1bbcaea710b31ea 116 SUPERFAMILY SSF103196 4 97 2.3E-5 T 13-10-2018 Atc_1784 9f4b2cacdd929d82543db59dc3f1cb16 259 SUPERFAMILY SSF55729 22 226 1.83E-39 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atc_1784 9f4b2cacdd929d82543db59dc3f1cb16 259 Pfam PF13444 Acetyltransferase (GNAT) domain 38 138 3.3E-33 T 13-10-2018 Atc_1784 9f4b2cacdd929d82543db59dc3f1cb16 259 Gene3D G3DSA:3.40.630.30 23 162 1.0E-24 T 13-10-2018 Atc_2369 403f9c17f3b28f086f1a403346a29f7c 176 SUPERFAMILY SSF103247 46 171 1.96E-27 T 13-10-2018 IPR035923 TT1751-like domain superfamily Atc_2369 403f9c17f3b28f086f1a403346a29f7c 176 Gene3D G3DSA:3.30.310.70 45 172 1.7E-20 T 13-10-2018 IPR035923 TT1751-like domain superfamily Atc_2369 403f9c17f3b28f086f1a403346a29f7c 176 Pfam PF03625 Domain of unknown function DUF302 78 135 1.1E-16 T 13-10-2018 IPR005180 Domain of unknown function DUF302 Atc_2369 403f9c17f3b28f086f1a403346a29f7c 176 PIRSF PIRSF021774 45 173 1.6E-23 T 13-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 Atc_2058 3ad5e63529e5fb42af6bce25d50884b4 353 Gene3D G3DSA:3.40.50.300 55 286 4.7E-7 T 13-10-2018 Atc_2058 3ad5e63529e5fb42af6bce25d50884b4 353 SUPERFAMILY SSF52540 72 263 1.5E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m018 6fd21b380322dd368276a6be01ca7284 724 SUPERFAMILY SSF56935 32 724 8.33E-61 T 13-10-2018 Atc_m018 6fd21b380322dd368276a6be01ca7284 724 Pfam PF07715 TonB-dependent Receptor Plug Domain 23 98 2.5E-7 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Atc_m018 6fd21b380322dd368276a6be01ca7284 724 Pfam PF00593 TonB dependent receptor 235 722 1.8E-27 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atc_m018 6fd21b380322dd368276a6be01ca7284 724 Gene3D G3DSA:2.170.130.10 19 141 6.6E-8 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atc_1969 a2e0ce4cef1cb2152165edc8273f5b9b 209 SUPERFAMILY SSF52540 5 190 1.5E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1969 a2e0ce4cef1cb2152165edc8273f5b9b 209 Gene3D G3DSA:3.40.50.300 10 184 2.1E-65 T 13-10-2018 Atc_1969 a2e0ce4cef1cb2152165edc8273f5b9b 209 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 13-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Atc_1969 a2e0ce4cef1cb2152165edc8273f5b9b 209 SMART SM00072 5 188 3.0E-61 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Atc_1969 a2e0ce4cef1cb2152165edc8273f5b9b 209 Pfam PF00625 Guanylate kinase 9 186 7.8E-49 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Atc_1969 a2e0ce4cef1cb2152165edc8273f5b9b 209 Hamap MF_00328 Guanylate kinase [gmk]. 4 188 35.94 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Atc_1969 a2e0ce4cef1cb2152165edc8273f5b9b 209 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 7 185 1.4E-70 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Atc_1969 a2e0ce4cef1cb2152165edc8273f5b9b 209 Gene3D G3DSA:3.30.63.10 37 96 2.1E-65 T 13-10-2018 Atc_1414 6e68c03cf682ff2ccf43106d2b98cbb3 178 Gene3D G3DSA:3.30.700.10 22 173 7.0E-20 T 13-10-2018 Atc_1414 6e68c03cf682ff2ccf43106d2b98cbb3 178 SUPERFAMILY SSF54523 22 90 2.28E-18 T 13-10-2018 Atc_1414 6e68c03cf682ff2ccf43106d2b98cbb3 178 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 42 1.6E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_1414 6e68c03cf682ff2ccf43106d2b98cbb3 178 Pfam PF07963 Prokaryotic N-terminal methylation motif 19 42 2.1E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_1790 c739a39209e53b1cf9504b4e41866978 88 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 10 67 6.1E-29 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Atc_1790 c739a39209e53b1cf9504b4e41866978 88 SUPERFAMILY SSF50182 10 71 3.79E-23 T 13-10-2018 IPR010920 LSM domain superfamily Atc_1790 c739a39209e53b1cf9504b4e41866978 88 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 6 67 27.422 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Atc_1790 c739a39209e53b1cf9504b4e41866978 88 Pfam PF17209 Hfq protein 10 71 1.9E-30 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Atc_1790 c739a39209e53b1cf9504b4e41866978 88 Gene3D G3DSA:2.30.30.100 4 83 1.1E-30 T 13-10-2018 Atc_1550 1f4b3bf7eac1cdc9f4d27e511dc7e4a6 335 SMART SM00155 96 122 24.0 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Atc_1550 1f4b3bf7eac1cdc9f4d27e511dc7e4a6 335 SMART SM00155 240 266 5.6 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Atc_1550 1f4b3bf7eac1cdc9f4d27e511dc7e4a6 335 Gene3D G3DSA:3.30.870.10 160 297 2.2E-14 T 13-10-2018 Atc_1550 1f4b3bf7eac1cdc9f4d27e511dc7e4a6 335 Gene3D G3DSA:3.30.870.10 5 154 5.1E-27 T 13-10-2018 Atc_1550 1f4b3bf7eac1cdc9f4d27e511dc7e4a6 335 SUPERFAMILY SSF56024 196 296 6.54E-11 T 13-10-2018 Atc_1550 1f4b3bf7eac1cdc9f4d27e511dc7e4a6 335 Pfam PF13091 PLD-like domain 17 150 2.8E-20 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atc_1550 1f4b3bf7eac1cdc9f4d27e511dc7e4a6 335 Pfam PF13091 PLD-like domain 195 293 1.9E-13 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atc_1550 1f4b3bf7eac1cdc9f4d27e511dc7e4a6 335 SUPERFAMILY SSF56024 3 152 3.36E-26 T 13-10-2018 Atc_1641 8ae1b02d64862677cf73c44d955ed700 536 Gene3D G3DSA:3.40.710.10 317 511 6.2E-48 T 13-10-2018 Atc_1641 8ae1b02d64862677cf73c44d955ed700 536 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 55 509 4.2E-69 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_1641 8ae1b02d64862677cf73c44d955ed700 536 SUPERFAMILY SSF56601 43 516 2.05E-70 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_1641 8ae1b02d64862677cf73c44d955ed700 536 Gene3D G3DSA:3.50.80.20 105 193 7.6E-6 T 13-10-2018 Atc_1641 8ae1b02d64862677cf73c44d955ed700 536 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 67 494 5.4E-59 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 SMART SM00448 3 115 1.7E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 Gene3D G3DSA:3.40.50.2300 4 122 9.2E-22 T 13-10-2018 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 Pfam PF00072 Response regulator receiver domain 6 112 1.8E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 Pfam PF00158 Sigma-54 interaction domain 146 311 2.1E-58 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 Gene3D G3DSA:1.10.8.60 316 392 4.8E-24 T 13-10-2018 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 SUPERFAMILY SSF46689 358 462 8.96E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 SUPERFAMILY SSF52172 5 188 5.12E-28 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 SMART SM00382 165 308 5.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 Gene3D G3DSA:1.10.10.60 413 461 1.3E-12 T 13-10-2018 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 SUPERFAMILY SSF52540 146 386 5.13E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 Gene3D G3DSA:3.40.50.300 130 315 5.4E-57 T 13-10-2018 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 443 7.4E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 463 7.4E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_0740 19ff69305f05514d4df77aaba5f0cb17 468 Pfam PF02954 Bacterial regulatory protein, Fis family 420 460 7.8E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atc_2690 c7ca1aa93213a9c694db74763ded9a48 240 SUPERFAMILY SSF48452 13 108 2.68E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2690 c7ca1aa93213a9c694db74763ded9a48 240 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 2 224 1.7E-64 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD Atc_2690 c7ca1aa93213a9c694db74763ded9a48 240 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 221 26.875 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD Atc_2690 c7ca1aa93213a9c694db74763ded9a48 240 Gene3D G3DSA:1.25.40.10 19 231 1.6E-47 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2690 c7ca1aa93213a9c694db74763ded9a48 240 Pfam PF13525 Outer membrane lipoprotein 19 213 6.7E-49 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Atc_0364 4dc22794e9ee7df03b6585434262e30a 229 Pfam PF00483 Nucleotidyl transferase 8 124 1.3E-11 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Atc_0364 4dc22794e9ee7df03b6585434262e30a 229 SUPERFAMILY SSF53448 6 222 1.35E-40 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0364 4dc22794e9ee7df03b6585434262e30a 229 Gene3D G3DSA:3.90.550.10 7 226 1.6E-41 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2215 d526b33cf728b3cf3c42b6ed31a3090b 569 PRINTS PR01607 Apyrase family signature 35 53 2.7E-10 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2215 d526b33cf728b3cf3c42b6ed31a3090b 569 PRINTS PR01607 Apyrase family signature 281 304 2.7E-10 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2215 d526b33cf728b3cf3c42b6ed31a3090b 569 PRINTS PR01607 Apyrase family signature 310 330 2.7E-10 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2215 d526b33cf728b3cf3c42b6ed31a3090b 569 PRINTS PR01607 Apyrase family signature 262 279 2.7E-10 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2215 d526b33cf728b3cf3c42b6ed31a3090b 569 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 2 552 3.8E-244 T 13-10-2018 IPR030998 Thiosulfohydrolase SoxB Atc_2215 d526b33cf728b3cf3c42b6ed31a3090b 569 SUPERFAMILY SSF56300 32 371 2.07E-74 T 13-10-2018 Atc_2215 d526b33cf728b3cf3c42b6ed31a3090b 569 Pfam PF02872 5'-nucleotidase, C-terminal domain 389 516 1.7E-12 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2215 d526b33cf728b3cf3c42b6ed31a3090b 569 SUPERFAMILY SSF55816 370 550 1.44E-28 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2215 d526b33cf728b3cf3c42b6ed31a3090b 569 Gene3D G3DSA:3.90.780.10 373 560 6.5E-68 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atc_2215 d526b33cf728b3cf3c42b6ed31a3090b 569 Gene3D G3DSA:3.60.21.10 99 372 1.3E-76 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 Gene3D G3DSA:1.20.1580.10 684 822 1.2E-140 T 13-10-2018 Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 ProSitePatterns PS00211 ABC transporters family signature. 822 836 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 Gene3D G3DSA:3.40.50.300 609 928 1.2E-140 T 13-10-2018 Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 SUPERFAMILY SSF52540 1 562 1.66E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 917 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 SUPERFAMILY SSF52540 607 902 8.08E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 Gene3D G3DSA:3.30.190.20 128 242 2.6E-240 T 13-10-2018 Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 932 22.276 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 Gene3D G3DSA:1.10.8.280 285 396 2.6E-240 T 13-10-2018 Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 Gene3D G3DSA:1.20.1580.10 90 485 2.6E-240 T 13-10-2018 Atc_0634 5a94e57d92e35418e54fab829f6ba38d 938 Gene3D G3DSA:3.40.50.300 6 587 2.6E-240 T 13-10-2018 Atc_m252 d8e82035875a0b9ae0fe22685ecc14a0 165 Pfam PF03050 Transposase IS66 family 2 113 3.8E-35 T 13-10-2018 IPR004291 Transposase, IS66 Atc_m252 d8e82035875a0b9ae0fe22685ecc14a0 165 Pfam PF13817 IS66 C-terminal element 120 157 1.6E-17 T 13-10-2018 IPR039552 Transposase IS66, C-terminal Atc_1345 91c8fef668a782b36c3f50995a96b6fc 767 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 750 767 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site Atc_1345 91c8fef668a782b36c3f50995a96b6fc 767 SUPERFAMILY SSF56935 50 767 1.21E-56 T 13-10-2018 Atc_1345 91c8fef668a782b36c3f50995a96b6fc 767 Pfam PF00593 TonB dependent receptor 293 765 2.3E-19 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atc_1345 91c8fef668a782b36c3f50995a96b6fc 767 Gene3D G3DSA:2.40.170.20 203 767 4.1E-36 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atc_1345 91c8fef668a782b36c3f50995a96b6fc 767 Gene3D G3DSA:2.170.130.10 50 187 5.9E-8 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atc_1345 91c8fef668a782b36c3f50995a96b6fc 767 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 163 6.1E-8 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Atc_2413 2721eb6af0e52e8df1f2f2ba289beaa2 358 Pfam PF01565 FAD binding domain 5 132 2.0E-20 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Atc_2413 2721eb6af0e52e8df1f2f2ba289beaa2 358 SUPERFAMILY SSF56176 5 171 1.12E-31 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atc_2413 2721eb6af0e52e8df1f2f2ba289beaa2 358 Pfam PF02913 FAD linked oxidases, C-terminal domain 332 353 8.3E-6 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Atc_2413 2721eb6af0e52e8df1f2f2ba289beaa2 358 Gene3D G3DSA:3.30.465.10 51 170 3.5E-31 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atc_2413 2721eb6af0e52e8df1f2f2ba289beaa2 358 SUPERFAMILY SSF55103 124 354 4.91E-15 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Atc_2413 2721eb6af0e52e8df1f2f2ba289beaa2 358 Gene3D G3DSA:1.10.45.10 329 354 6.2E-6 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Atc_0404 1cb33f3801cff95276af430a0980d75f 57 Pfam PF04362 Bacterial Fe(2+) trafficking 1 55 9.5E-26 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Atc_0404 1cb33f3801cff95276af430a0980d75f 57 Gene3D G3DSA:1.10.3880.10 1 57 3.3E-25 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Atc_0404 1cb33f3801cff95276af430a0980d75f 57 SUPERFAMILY SSF111148 1 56 2.88E-23 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Atc_0404 1cb33f3801cff95276af430a0980d75f 57 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 42 6.0E-14 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Atc_2368 f711bac9d19c687f8ecaea5d16b0b10d 287 PIRSF PIRSF038455 4 287 8.2E-82 T 13-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Atc_2368 f711bac9d19c687f8ecaea5d16b0b10d 287 Gene3D G3DSA:1.10.760.10 170 286 8.3E-39 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_2368 f711bac9d19c687f8ecaea5d16b0b10d 287 Gene3D G3DSA:1.10.760.10 45 169 1.6E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_2368 f711bac9d19c687f8ecaea5d16b0b10d 287 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 81 286 2.0E-71 T 13-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Atc_2368 f711bac9d19c687f8ecaea5d16b0b10d 287 SUPERFAMILY SSF46626 58 172 5.38E-23 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_2368 f711bac9d19c687f8ecaea5d16b0b10d 287 SUPERFAMILY SSF46626 177 287 8.95E-27 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_2716 4c63067705bae8913101419dff46fd3c 391 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 147 389 3.1E-78 T 13-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 Atc_2716 4c63067705bae8913101419dff46fd3c 391 Pfam PF01578 Cytochrome C assembly protein 178 386 5.1E-50 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Atc_0828 57456b12652f82d6b6b38fab69aa001a 141 SUPERFAMILY SSF82649 1 126 2.15E-48 T 13-10-2018 Atc_0828 57456b12652f82d6b6b38fab69aa001a 141 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.3E-68 T 13-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Atc_0828 57456b12652f82d6b6b38fab69aa001a 141 Gene3D G3DSA:3.90.1010.10 1 133 2.9E-59 T 13-10-2018 Atc_0828 57456b12652f82d6b6b38fab69aa001a 141 Pfam PF01592 NifU-like N terminal domain 2 125 5.7E-57 T 13-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Atc_1467 b03704159e6e4cb013acbd642e7eece0 381 Pfam PF02119 Flagellar P-ring protein 37 380 5.1E-135 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atc_1467 b03704159e6e4cb013acbd642e7eece0 381 PRINTS PR01010 Flagellar P-ring protein signature 178 196 3.6E-70 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atc_1467 b03704159e6e4cb013acbd642e7eece0 381 PRINTS PR01010 Flagellar P-ring protein signature 51 66 3.6E-70 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atc_1467 b03704159e6e4cb013acbd642e7eece0 381 PRINTS PR01010 Flagellar P-ring protein signature 138 156 3.6E-70 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atc_1467 b03704159e6e4cb013acbd642e7eece0 381 PRINTS PR01010 Flagellar P-ring protein signature 204 222 3.6E-70 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atc_1467 b03704159e6e4cb013acbd642e7eece0 381 PRINTS PR01010 Flagellar P-ring protein signature 268 280 3.6E-70 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atc_1467 b03704159e6e4cb013acbd642e7eece0 381 PRINTS PR01010 Flagellar P-ring protein signature 36 51 3.6E-70 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atc_1467 b03704159e6e4cb013acbd642e7eece0 381 PRINTS PR01010 Flagellar P-ring protein signature 99 118 3.6E-70 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atc_1467 b03704159e6e4cb013acbd642e7eece0 381 PRINTS PR01010 Flagellar P-ring protein signature 121 138 3.6E-70 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atc_1467 b03704159e6e4cb013acbd642e7eece0 381 Hamap MF_00416 Flagellar P-ring protein [flgI]. 16 381 37.09 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atc_1348 28ba5c45525c808fd686dfac8fc5a54e 339 Gene3D G3DSA:3.40.50.2000 1 178 4.9E-22 T 13-10-2018 Atc_1348 28ba5c45525c808fd686dfac8fc5a54e 339 Pfam PF13439 Glycosyltransferase Family 4 14 165 1.4E-14 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atc_1348 28ba5c45525c808fd686dfac8fc5a54e 339 Gene3D G3DSA:3.40.50.2000 179 317 9.2E-22 T 13-10-2018 Atc_1348 28ba5c45525c808fd686dfac8fc5a54e 339 Pfam PF13692 Glycosyl transferases group 1 184 304 1.2E-16 T 13-10-2018 Atc_1348 28ba5c45525c808fd686dfac8fc5a54e 339 SUPERFAMILY SSF53756 2 329 2.67E-58 T 13-10-2018 Atc_3p12 2d4c126aeacec08d539bf8833156696e 112 Gene3D G3DSA:4.10.520.10 1 94 2.3E-30 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_3p12 2d4c126aeacec08d539bf8833156696e 112 SUPERFAMILY SSF47729 3 92 5.15E-26 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_3p12 2d4c126aeacec08d539bf8833156696e 112 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.0E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_3p12 2d4c126aeacec08d539bf8833156696e 112 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.0E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_3p12 2d4c126aeacec08d539bf8833156696e 112 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.0E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_3p12 2d4c126aeacec08d539bf8833156696e 112 SMART SM00411 3 92 2.6E-31 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_3p12 2d4c126aeacec08d539bf8833156696e 112 Pfam PF00216 Bacterial DNA-binding protein 3 90 3.8E-26 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_3p12 2d4c126aeacec08d539bf8833156696e 112 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Atc_0842 5e223513347416a9022abd4df5de353c 292 Gene3D G3DSA:1.10.286.20 189 235 5.7E-40 T 13-10-2018 Atc_0842 5e223513347416a9022abd4df5de353c 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 73.26 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atc_0842 5e223513347416a9022abd4df5de353c 292 SUPERFAMILY SSF54713 55 143 4.58E-18 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Atc_0842 5e223513347416a9022abd4df5de353c 292 Gene3D G3DSA:1.10.8.10 1 55 1.3E-25 T 13-10-2018 Atc_0842 5e223513347416a9022abd4df5de353c 292 Gene3D G3DSA:3.30.479.20 151 270 5.7E-40 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Atc_0842 5e223513347416a9022abd4df5de353c 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 290 7.2E-100 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atc_0842 5e223513347416a9022abd4df5de353c 292 Pfam PF00889 Elongation factor TS 72 271 3.5E-66 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Atc_0842 5e223513347416a9022abd4df5de353c 292 SUPERFAMILY SSF46934 1 55 1.24E-17 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 Atc_0842 5e223513347416a9022abd4df5de353c 292 Gene3D G3DSA:3.30.479.20 56 144 3.8E-25 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Atc_0842 5e223513347416a9022abd4df5de353c 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atc_0842 5e223513347416a9022abd4df5de353c 292 SUPERFAMILY SSF54713 147 290 1.02E-46 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Atc_1484 32224eaf23691cab75e3d520cf75c192 568 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 24 566 3.2E-104 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atc_1484 32224eaf23691cab75e3d520cf75c192 568 Pfam PF08345 Flagellar M-ring protein C-terminal 260 441 7.6E-47 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal Atc_1484 32224eaf23691cab75e3d520cf75c192 568 Pfam PF01514 Secretory protein of YscJ/FliF family 39 228 5.6E-72 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF Atc_1484 32224eaf23691cab75e3d520cf75c192 568 PRINTS PR01009 Flagellar M-ring protein signature 161 175 3.8E-34 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atc_1484 32224eaf23691cab75e3d520cf75c192 568 PRINTS PR01009 Flagellar M-ring protein signature 204 222 3.8E-34 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atc_1484 32224eaf23691cab75e3d520cf75c192 568 PRINTS PR01009 Flagellar M-ring protein signature 273 291 3.8E-34 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atc_1484 32224eaf23691cab75e3d520cf75c192 568 PRINTS PR01009 Flagellar M-ring protein signature 364 388 3.8E-34 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atc_1484 32224eaf23691cab75e3d520cf75c192 568 PRINTS PR01009 Flagellar M-ring protein signature 129 147 3.8E-34 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atc_1484 32224eaf23691cab75e3d520cf75c192 568 PIRSF PIRSF004862 15 568 2.7E-148 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atc_1484 32224eaf23691cab75e3d520cf75c192 568 Gene3D G3DSA:3.30.300.30 128 231 9.3E-11 T 13-10-2018 Atc_0813 9bf7d45c7d57eeef38d32afbdf39ae68 56 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 53 8.4E-25 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0813 9bf7d45c7d57eeef38d32afbdf39ae68 56 PRINTS PR01249 Ribosomal protein L31 signature 33 51 2.5E-13 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0813 9bf7d45c7d57eeef38d32afbdf39ae68 56 PRINTS PR01249 Ribosomal protein L31 signature 18 33 2.5E-13 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0813 9bf7d45c7d57eeef38d32afbdf39ae68 56 Gene3D G3DSA:2.30.170.50 1 56 2.0E-24 T 13-10-2018 Atc_0813 9bf7d45c7d57eeef38d32afbdf39ae68 56 SUPERFAMILY SSF143800 1 53 3.57E-19 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0813 9bf7d45c7d57eeef38d32afbdf39ae68 56 Pfam PF01197 Ribosomal protein L31 1 52 2.1E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0514 a8671049103754333d800d5abeb605a8 548 Gene3D G3DSA:1.25.40.10 57 286 2.4E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0514 a8671049103754333d800d5abeb605a8 548 Pfam PF14559 Tetratricopeptide repeat 67 125 1.9E-6 T 13-10-2018 Atc_0514 a8671049103754333d800d5abeb605a8 548 SUPERFAMILY SSF48452 63 125 7.3E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0514 a8671049103754333d800d5abeb605a8 548 Pfam PF13174 Tetratricopeptide repeat 169 195 0.15 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0514 a8671049103754333d800d5abeb605a8 548 SUPERFAMILY SSF48452 168 301 6.96E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0514 a8671049103754333d800d5abeb605a8 548 TIGRFAM TIGR04390 OMP_YaiO_dom: outer membrane protein, YaiO family 352 545 1.4E-10 T 13-10-2018 IPR030887 YaiO family, OMP domain Atc_0711 0d909354214a1de31982002f0d8b5e83 154 SUPERFAMILY SSF52402 5 151 2.18E-31 T 13-10-2018 Atc_0711 0d909354214a1de31982002f0d8b5e83 154 Gene3D G3DSA:3.40.50.620 2 150 2.3E-33 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0711 0d909354214a1de31982002f0d8b5e83 154 Pfam PF00582 Universal stress protein family 5 149 2.5E-27 T 13-10-2018 IPR006016 UspA Atc_0711 0d909354214a1de31982002f0d8b5e83 154 PIRSF PIRSF006276 3 152 3.0E-18 T 13-10-2018 IPR006015 Universal stress protein A Atc_0711 0d909354214a1de31982002f0d8b5e83 154 PRINTS PR01438 Universal stress protein signature 5 23 2.6E-15 T 13-10-2018 IPR006015 Universal stress protein A Atc_0711 0d909354214a1de31982002f0d8b5e83 154 PRINTS PR01438 Universal stress protein signature 127 149 2.6E-15 T 13-10-2018 IPR006015 Universal stress protein A Atc_0711 0d909354214a1de31982002f0d8b5e83 154 PRINTS PR01438 Universal stress protein signature 109 121 2.6E-15 T 13-10-2018 IPR006015 Universal stress protein A Atc_0827 95e75a3b6ddd0ba9cd85c9a0a909b418 422 SUPERFAMILY SSF53383 22 409 1.11E-110 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_0827 95e75a3b6ddd0ba9cd85c9a0a909b418 422 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 20 413 54.569 T 13-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Atc_0827 95e75a3b6ddd0ba9cd85c9a0a909b418 422 Gene3D G3DSA:3.40.640.10 35 279 6.7E-160 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_0827 95e75a3b6ddd0ba9cd85c9a0a909b418 422 Gene3D G3DSA:3.90.1150.10 24 393 6.7E-160 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_0827 95e75a3b6ddd0ba9cd85c9a0a909b418 422 Pfam PF00266 Aminotransferase class-V 24 385 1.5E-84 T 13-10-2018 IPR000192 Aminotransferase class V domain Atc_0827 95e75a3b6ddd0ba9cd85c9a0a909b418 422 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 22 422 2.6E-216 T 13-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Atc_0827 95e75a3b6ddd0ba9cd85c9a0a909b418 422 PIRSF PIRSF005572 21 402 6.1E-133 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Atc_2127 2e70663ebb2d2d285ae887f70a5a7e29 259 Gene3D G3DSA:3.40.50.720 10 258 2.3E-28 T 13-10-2018 Atc_2127 2e70663ebb2d2d285ae887f70a5a7e29 259 SUPERFAMILY SSF69572 12 227 5.89E-21 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Atc_2127 2e70663ebb2d2d285ae887f70a5a7e29 259 Pfam PF00899 ThiF family 11 217 1.7E-18 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Atc_2127 2e70663ebb2d2d285ae887f70a5a7e29 259 TIGRFAM TIGR03736 PRTRC_ThiF: PRTRC system ThiF family protein 9 243 1.6E-85 T 13-10-2018 IPR022500 ParB-related, ThiF-related cassette, ThiF Atc_0923 9544bbc6ede245f21995f09fa9fa13ce 342 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 106 124 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Atc_0923 9544bbc6ede245f21995f09fa9fa13ce 342 Pfam PF01207 Dihydrouridine synthase (Dus) 26 326 4.5E-61 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Atc_0923 9544bbc6ede245f21995f09fa9fa13ce 342 Gene3D G3DSA:3.20.20.70 20 260 9.8E-64 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0923 9544bbc6ede245f21995f09fa9fa13ce 342 SUPERFAMILY SSF51395 24 314 3.07E-58 T 13-10-2018 Atc_0923 9544bbc6ede245f21995f09fa9fa13ce 342 Gene3D G3DSA:1.20.120.1460 261 330 1.1E-5 T 13-10-2018 Atc_1936A e8fe1b5cc201b622442f6791eef8d70f 181 SUPERFAMILY SSF89155 3 164 4.84E-22 T 13-10-2018 IPR036411 TorD-like superfamily Atc_1936A e8fe1b5cc201b622442f6791eef8d70f 181 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 12 164 5.4E-27 T 13-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 Atc_1936A e8fe1b5cc201b622442f6791eef8d70f 181 Pfam PF02613 Nitrate reductase delta subunit 21 138 4.9E-8 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Atc_2320 ab563cb68c1d8e6539df019b2e661359 193 Pfam PF13098 Thioredoxin-like domain 53 189 5.1E-15 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_2320 ab563cb68c1d8e6539df019b2e661359 193 SUPERFAMILY SSF52833 40 190 1.12E-25 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2320 ab563cb68c1d8e6539df019b2e661359 193 Gene3D G3DSA:3.40.30.10 48 192 2.1E-30 T 13-10-2018 Atc_m255 488daaff7df020e871f639b8be03bea2 450 SUPERFAMILY SSF53098 158 385 2.12E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_m255 488daaff7df020e871f639b8be03bea2 450 Pfam PF13701 Transposase DDE domain group 1 7 440 8.5E-29 T 13-10-2018 IPR025668 Transposase DDE domain Atc_0206 0ae6adb4edd53d7f57eaa1f260ccf9c8 481 SUPERFAMILY SSF51182 195 478 3.45E-81 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Atc_0206 0ae6adb4edd53d7f57eaa1f260ccf9c8 481 SUPERFAMILY SSF53448 5 287 1.06E-65 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0206 0ae6adb4edd53d7f57eaa1f260ccf9c8 481 Pfam PF00483 Nucleotidyl transferase 6 288 2.5E-57 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Atc_0206 0ae6adb4edd53d7f57eaa1f260ccf9c8 481 Gene3D G3DSA:2.60.120.10 359 464 4.6E-18 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_0206 0ae6adb4edd53d7f57eaa1f260ccf9c8 481 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 5 478 7.1E-174 T 13-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Atc_0206 0ae6adb4edd53d7f57eaa1f260ccf9c8 481 Pfam PF01050 Mannose-6-phosphate isomerase 324 474 2.6E-67 T 13-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Atc_0206 0ae6adb4edd53d7f57eaa1f260ccf9c8 481 Gene3D G3DSA:3.90.550.10 3 358 3.1E-113 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0434 6cb8ae0350fd997813bd7cc6f0a35e8c 594 Gene3D G3DSA:3.40.50.150 2 292 1.7E-22 T 13-10-2018 Atc_0434 6cb8ae0350fd997813bd7cc6f0a35e8c 594 SUPERFAMILY SSF53335 10 287 2.77E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0434 6cb8ae0350fd997813bd7cc6f0a35e8c 594 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 13 27 9.7E-5 T 13-10-2018 Atc_0434 6cb8ae0350fd997813bd7cc6f0a35e8c 594 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 149 161 9.7E-5 T 13-10-2018 Atc_1926 ec2bc45bd692e6ee23f36954b162921c 313 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 236 260 - T 13-10-2018 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 Atc_1926 ec2bc45bd692e6ee23f36954b162921c 313 Gene3D G3DSA:1.10.340.30 130 252 6.6E-40 T 13-10-2018 Atc_1926 ec2bc45bd692e6ee23f36954b162921c 313 SUPERFAMILY SSF48150 120 304 2.62E-40 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Atc_1926 ec2bc45bd692e6ee23f36954b162921c 313 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 139 290 8.3E-12 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atc_1926 ec2bc45bd692e6ee23f36954b162921c 313 Gene3D G3DSA:1.10.1670.40 110 297 6.6E-40 T 13-10-2018 Atc_1926 ec2bc45bd692e6ee23f36954b162921c 313 SMART SM00478 142 306 4.3E-18 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atc_2871 af176f031a08ca2b658577d8ead4a9be 296 Gene3D G3DSA:3.40.50.150 93 287 1.1E-48 T 13-10-2018 Atc_2871 af176f031a08ca2b658577d8ead4a9be 296 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 10 271 1.2E-54 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Atc_2871 af176f031a08ca2b658577d8ead4a9be 296 SUPERFAMILY SSF53335 33 259 1.1E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2871 af176f031a08ca2b658577d8ead4a9be 296 PIRSF PIRSF000401 59 280 1.1E-66 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Atc_2871 af176f031a08ca2b658577d8ead4a9be 296 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 8 278 26.876 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Atc_2871 af176f031a08ca2b658577d8ead4a9be 296 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 8 278 1.7E-68 T 13-10-2018 Atc_0701 5e49c704bd73c848d59b81927d9ca604 271 SUPERFAMILY SSF56300 3 259 9.93E-78 T 13-10-2018 Atc_0701 5e49c704bd73c848d59b81927d9ca604 271 PIRSF PIRSF004789 2 264 1.7E-86 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Atc_0701 5e49c704bd73c848d59b81927d9ca604 271 Pfam PF13277 YmdB-like protein 6 258 8.3E-95 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Atc_0701 5e49c704bd73c848d59b81927d9ca604 271 Gene3D G3DSA:3.60.21.10 1 266 3.4E-96 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Atc_1432 d6306a69133254a1e7529c75db78f68b 316 SUPERFAMILY SSF55174 17 67 4.12E-9 T 13-10-2018 Atc_1432 d6306a69133254a1e7529c75db78f68b 316 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_1432 d6306a69133254a1e7529c75db78f68b 316 Pfam PF01479 S4 domain 18 64 4.3E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_1432 d6306a69133254a1e7529c75db78f68b 316 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 312 1.7E-81 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_1432 d6306a69133254a1e7529c75db78f68b 316 Gene3D G3DSA:3.10.290.10 7 70 5.8E-16 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atc_1432 d6306a69133254a1e7529c75db78f68b 316 SUPERFAMILY SSF55120 83 312 1.76E-62 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_1432 d6306a69133254a1e7529c75db78f68b 316 Gene3D G3DSA:3.30.2350.10 89 315 7.3E-76 T 13-10-2018 Atc_1432 d6306a69133254a1e7529c75db78f68b 316 SMART SM00363 18 85 2.5E-6 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_1432 d6306a69133254a1e7529c75db78f68b 316 Pfam PF00849 RNA pseudouridylate synthase 99 248 1.8E-27 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_0484 012c40b3ff82b24ea91dfdd2b09c9731 304 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Atc_0484 012c40b3ff82b24ea91dfdd2b09c9731 304 Gene3D G3DSA:1.10.1040.10 159 292 6.0E-33 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atc_0484 012c40b3ff82b24ea91dfdd2b09c9731 304 SUPERFAMILY SSF48179 166 291 1.13E-26 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atc_0484 012c40b3ff82b24ea91dfdd2b09c9731 304 Gene3D G3DSA:3.40.50.720 1 158 8.6E-36 T 13-10-2018 Atc_0484 012c40b3ff82b24ea91dfdd2b09c9731 304 PIRSF PIRSF000103 1 293 1.1E-65 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Atc_0484 012c40b3ff82b24ea91dfdd2b09c9731 304 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 157 5.4E-27 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Atc_0484 012c40b3ff82b24ea91dfdd2b09c9731 304 SUPERFAMILY SSF51735 2 160 3.64E-30 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0484 012c40b3ff82b24ea91dfdd2b09c9731 304 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 281 6.2E-16 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Atc_2873 b1557eca52563a7e837d54767b59f934 165 SUPERFAMILY SSF51230 87 161 4.06E-25 T 13-10-2018 IPR011053 Single hybrid motif Atc_2873 b1557eca52563a7e837d54767b59f934 165 Gene3D G3DSA:2.40.50.100 85 161 4.4E-32 T 13-10-2018 Atc_2873 b1557eca52563a7e837d54767b59f934 165 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 162 2.0E-49 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Atc_2873 b1557eca52563a7e837d54767b59f934 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 123 136 4.4E-18 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Atc_2873 b1557eca52563a7e837d54767b59f934 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 108 122 4.4E-18 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Atc_2873 b1557eca52563a7e837d54767b59f934 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 91 104 4.4E-18 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Atc_2873 b1557eca52563a7e837d54767b59f934 165 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 118 135 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atc_2873 b1557eca52563a7e837d54767b59f934 165 Pfam PF00364 Biotin-requiring enzyme 89 161 9.2E-24 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Atc_2658 c47e6e13335781b2ab1e836a6eec2229 454 Gene3D G3DSA:3.40.50.720 7 96 1.4E-15 T 13-10-2018 Atc_2658 c47e6e13335781b2ab1e836a6eec2229 454 SUPERFAMILY SSF51984 9 97 4.32E-15 T 13-10-2018 Atc_2658 c47e6e13335781b2ab1e836a6eec2229 454 SUPERFAMILY SSF53244 309 448 8.24E-38 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_2658 c47e6e13335781b2ab1e836a6eec2229 454 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 446 2.2E-119 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atc_2658 c47e6e13335781b2ab1e836a6eec2229 454 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 448 32.435 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atc_2658 c47e6e13335781b2ab1e836a6eec2229 454 SUPERFAMILY SSF53623 100 307 1.83E-52 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_2658 c47e6e13335781b2ab1e836a6eec2229 454 Gene3D G3DSA:3.90.190.20 310 444 5.5E-39 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atc_2658 c47e6e13335781b2ab1e836a6eec2229 454 Pfam PF08245 Mur ligase middle domain 114 289 2.1E-33 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Atc_2658 c47e6e13335781b2ab1e836a6eec2229 454 Gene3D G3DSA:3.40.1190.10 98 309 9.6E-61 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atc_1511 49ecf1cf272e39a1e3c9273c80d9ac6e 180 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 4 133 1.2E-31 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atc_1511 49ecf1cf272e39a1e3c9273c80d9ac6e 180 SUPERFAMILY SSF55083 2 149 1.7E-45 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atc_1511 49ecf1cf272e39a1e3c9273c80d9ac6e 180 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 3 134 7.5E-36 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atc_1511 49ecf1cf272e39a1e3c9273c80d9ac6e 180 Gene3D G3DSA:3.30.70.560 1 159 4.1E-47 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atc_2727 5209b94f71d263dedcf02fe2f1ebc0a6 55 Pfam PF07007 Lysozyme inhibitor LprI 1 42 1.1E-5 T 13-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal Atc_1384 4e871f3821f76e3eb976c886290137e4 345 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 9 333 2.4E-135 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Atc_1384 4e871f3821f76e3eb976c886290137e4 345 Gene3D G3DSA:3.40.50.10470 151 342 1.0E-64 T 13-10-2018 Atc_1384 4e871f3821f76e3eb976c886290137e4 345 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 6 344 40.363 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Atc_1384 4e871f3821f76e3eb976c886290137e4 345 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 35 334 4.6E-116 T 13-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Atc_1384 4e871f3821f76e3eb976c886290137e4 345 Pfam PF01008 Initiation factor 2 subunit family 49 334 2.7E-78 T 13-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 Atc_1384 4e871f3821f76e3eb976c886290137e4 345 Gene3D G3DSA:1.20.120.420 6 145 5.0E-42 T 13-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Atc_1384 4e871f3821f76e3eb976c886290137e4 345 SUPERFAMILY SSF100950 5 338 2.09E-113 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Atc_0594 bdda3222f6c5ad17f2964d70a8c23089 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.7E-25 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Atc_0594 bdda3222f6c5ad17f2964d70a8c23089 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.96 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Atc_0594 bdda3222f6c5ad17f2964d70a8c23089 142 Gene3D G3DSA:3.30.1550.10 2 72 9.3E-34 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Atc_0594 bdda3222f6c5ad17f2964d70a8c23089 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.0E-27 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal Atc_0594 bdda3222f6c5ad17f2964d70a8c23089 142 SMART SM00649 9 141 2.2E-81 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Atc_0594 bdda3222f6c5ad17f2964d70a8c23089 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 69 5.0E-13 T 13-10-2018 Atc_0594 bdda3222f6c5ad17f2964d70a8c23089 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 13-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_0594 bdda3222f6c5ad17f2964d70a8c23089 142 Gene3D G3DSA:1.10.10.250 73 141 7.5E-28 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Atc_0594 bdda3222f6c5ad17f2964d70a8c23089 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 6.8E-65 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0594 bdda3222f6c5ad17f2964d70a8c23089 142 SUPERFAMILY SSF46906 68 141 2.62E-26 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Atc_0594 bdda3222f6c5ad17f2964d70a8c23089 142 SUPERFAMILY SSF54747 3 73 1.7E-29 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Atc_1519 8ad05c5c844f89df2d6c1f75e64a422c 312 SUPERFAMILY SSF48150 112 295 7.5E-41 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Atc_1519 8ad05c5c844f89df2d6c1f75e64a422c 312 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 228 252 - T 13-10-2018 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 Atc_1519 8ad05c5c844f89df2d6c1f75e64a422c 312 SMART SM00478 134 298 5.5E-20 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atc_1519 8ad05c5c844f89df2d6c1f75e64a422c 312 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 131 282 1.6E-11 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atc_1519 8ad05c5c844f89df2d6c1f75e64a422c 312 Gene3D G3DSA:1.10.340.30 122 244 7.3E-39 T 13-10-2018 Atc_1519 8ad05c5c844f89df2d6c1f75e64a422c 312 Gene3D G3DSA:1.10.1670.40 102 289 7.3E-39 T 13-10-2018 Atc_1091 32f9a8960af00a7448968021e609b0d4 332 Gene3D G3DSA:1.10.10.10 16 104 1.3E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1091 32f9a8960af00a7448968021e609b0d4 332 SUPERFAMILY SSF53850 110 313 5.57E-41 T 13-10-2018 Atc_1091 32f9a8960af00a7448968021e609b0d4 332 SUPERFAMILY SSF46785 19 101 2.12E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1091 32f9a8960af00a7448968021e609b0d4 332 Gene3D G3DSA:3.40.190.290 110 319 1.2E-41 T 13-10-2018 Atc_1091 32f9a8960af00a7448968021e609b0d4 332 Pfam PF03466 LysR substrate binding domain 109 311 1.2E-47 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_1091 32f9a8960af00a7448968021e609b0d4 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 82 2.2E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_1091 32f9a8960af00a7448968021e609b0d4 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 59 70 8.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_1091 32f9a8960af00a7448968021e609b0d4 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 59 8.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_1091 32f9a8960af00a7448968021e609b0d4 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 8.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_0980 e8ba776193a9835de77c634b7ea962e5 358 Gene3D G3DSA:3.20.20.70 3 355 2.9E-125 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0980 e8ba776193a9835de77c634b7ea962e5 358 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 337 1.2E-63 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Atc_0980 e8ba776193a9835de77c634b7ea962e5 358 SUPERFAMILY SSF51395 4 351 2.28E-115 T 13-10-2018 Atc_0741 773ba87f9c438ccf2872f61de40afa3b 482 Gene3D G3DSA:1.10.443.10 271 474 4.2E-17 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_0741 773ba87f9c438ccf2872f61de40afa3b 482 Pfam PF00589 Phage integrase family 273 447 2.7E-9 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_0741 773ba87f9c438ccf2872f61de40afa3b 482 SUPERFAMILY SSF56349 137 466 6.47E-27 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_2660 32de916c6621d22eadba9a88a5db3695 367 Gene3D G3DSA:3.40.50.2000 16 355 3.9E-113 T 13-10-2018 Atc_2660 32de916c6621d22eadba9a88a5db3695 367 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 15 152 2.9E-37 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2660 32de916c6621d22eadba9a88a5db3695 367 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 14 360 6.2E-102 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2660 32de916c6621d22eadba9a88a5db3695 367 SUPERFAMILY SSF53756 14 364 1.91E-115 T 13-10-2018 Atc_2660 32de916c6621d22eadba9a88a5db3695 367 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 193 356 3.9E-35 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Atc_2660 32de916c6621d22eadba9a88a5db3695 367 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 15 365 35.681 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2660 32de916c6621d22eadba9a88a5db3695 367 Gene3D G3DSA:3.40.50.2000 170 349 3.9E-113 T 13-10-2018 Atc_2824 7b11f1c999fc55790e8aa3392e7ee038 214 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 64 5.1E-12 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Atc_2824 7b11f1c999fc55790e8aa3392e7ee038 214 Gene3D G3DSA:3.40.50.620 2 211 1.4E-63 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2824 7b11f1c999fc55790e8aa3392e7ee038 214 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 212 30.72 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Atc_2824 7b11f1c999fc55790e8aa3392e7ee038 214 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 211 2.3E-50 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Atc_2824 7b11f1c999fc55790e8aa3392e7ee038 214 SUPERFAMILY SSF52374 5 213 5.35E-55 T 13-10-2018 Atc_2824 7b11f1c999fc55790e8aa3392e7ee038 214 Pfam PF01467 Cytidylyltransferase-like 7 184 7.4E-29 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Atc_1413 54c3d0bda9a3dca5d15dd6d96d27e2ea 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 5.6E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_1413 54c3d0bda9a3dca5d15dd6d96d27e2ea 167 Gene3D G3DSA:3.30.700.10 16 158 9.4E-20 T 13-10-2018 Atc_1413 54c3d0bda9a3dca5d15dd6d96d27e2ea 167 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 35 3.2E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_1413 54c3d0bda9a3dca5d15dd6d96d27e2ea 167 SUPERFAMILY SSF54523 16 106 8.63E-18 T 13-10-2018 Atc_1413 54c3d0bda9a3dca5d15dd6d96d27e2ea 167 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 SUPERFAMILY SSF53067 4 183 6.15E-70 T 13-10-2018 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 4.6E-290 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 SUPERFAMILY SSF53067 187 382 6.17E-65 T 13-10-2018 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 Gene3D G3DSA:3.90.640.10 229 316 2.1E-167 T 13-10-2018 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 Gene3D G3DSA:1.20.1270.10 524 604 3.4E-17 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 Gene3D G3DSA:3.30.420.40 5 379 2.1E-167 T 13-10-2018 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 SUPERFAMILY SSF100920 386 540 2.62E-62 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 Gene3D G3DSA:3.30.420.40 180 366 2.1E-167 T 13-10-2018 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 PRINTS PR00301 70kDa heat shock protein signature 138 158 9.5E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 PRINTS PR00301 70kDa heat shock protein signature 54 62 9.5E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 PRINTS PR00301 70kDa heat shock protein signature 388 407 9.5E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 PRINTS PR00301 70kDa heat shock protein signature 469 485 9.5E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 9.5E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 PRINTS PR00301 70kDa heat shock protein signature 198 208 9.5E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 PRINTS PR00301 70kDa heat shock protein signature 334 350 9.5E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 PRINTS PR00301 70kDa heat shock protein signature 365 385 9.5E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 9.5E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 Gene3D G3DSA:2.60.34.10 383 523 1.4E-65 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 36.498 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Atc_2505 6dd89a164910329cad4d9f5ce01eb48f 637 Pfam PF00012 Hsp70 protein 4 599 3.8E-264 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atc_0335 514bd806b93d34125396cc24d3c3612e 276 Gene3D G3DSA:3.20.20.220 1 276 2.0E-94 T 13-10-2018 Atc_0335 514bd806b93d34125396cc24d3c3612e 276 Pfam PF02219 Methylenetetrahydrofolate reductase 5 275 6.2E-83 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Atc_0335 514bd806b93d34125396cc24d3c3612e 276 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 7 274 1.3E-92 T 13-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 Atc_0335 514bd806b93d34125396cc24d3c3612e 276 SUPERFAMILY SSF51730 6 275 2.16E-90 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like Atc_0793 cc83613d46d3ef27e8163b7d9644c129 252 Gene3D G3DSA:1.20.1640.10 7 154 9.3E-47 T 13-10-2018 Atc_0793 cc83613d46d3ef27e8163b7d9644c129 252 PRINTS PR00702 Acriflavin resistance protein family signature 133 156 1.1E-5 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0793 cc83613d46d3ef27e8163b7d9644c129 252 PRINTS PR00702 Acriflavin resistance protein family signature 60 84 1.1E-5 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0793 cc83613d46d3ef27e8163b7d9644c129 252 PRINTS PR00702 Acriflavin resistance protein family signature 5 28 1.1E-5 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_0793 cc83613d46d3ef27e8163b7d9644c129 252 SUPERFAMILY SSF82866 9 155 1.57E-34 T 13-10-2018 Atc_0793 cc83613d46d3ef27e8163b7d9644c129 252 Pfam PF00873 AcrB/AcrD/AcrF family 11 154 4.6E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atc_1939 67da7e415b212d1a8cff01f398cfb57e 438 Gene3D G3DSA:1.20.1250.20 6 201 2.7E-32 T 13-10-2018 Atc_1939 67da7e415b212d1a8cff01f398cfb57e 438 Gene3D G3DSA:1.20.1250.20 240 429 5.1E-42 T 13-10-2018 Atc_1939 67da7e415b212d1a8cff01f398cfb57e 438 SUPERFAMILY SSF103473 13 423 1.44E-52 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_1939 67da7e415b212d1a8cff01f398cfb57e 438 Pfam PF07690 Major Facilitator Superfamily 20 385 2.8E-31 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_1451 87c8b5386bcf38a9667d323e729e136b 140 SUPERFAMILY SSF52172 9 134 2.56E-40 T 13-10-2018 IPR011006 CheY-like superfamily Atc_1451 87c8b5386bcf38a9667d323e729e136b 140 Pfam PF00072 Response regulator receiver domain 12 124 8.4E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1451 87c8b5386bcf38a9667d323e729e136b 140 Gene3D G3DSA:3.40.50.12740 9 140 1.3E-42 T 13-10-2018 Atc_1451 87c8b5386bcf38a9667d323e729e136b 140 SMART SM00448 10 124 6.0E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0227 3c507d0d2c3c18ded1e94d25eabc9d05 204 SMART SM01120 31 198 4.0E-69 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Atc_0227 3c507d0d2c3c18ded1e94d25eabc9d05 204 Gene3D G3DSA:1.25.40.340 2 199 1.5E-63 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Atc_0227 3c507d0d2c3c18ded1e94d25eabc9d05 204 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 8 196 6.8E-67 T 13-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 Atc_0227 3c507d0d2c3c18ded1e94d25eabc9d05 204 Pfam PF02734 DAK2 domain 31 197 8.2E-52 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Atc_0227 3c507d0d2c3c18ded1e94d25eabc9d05 204 SUPERFAMILY SSF101473 3 197 4.97E-55 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Atc_2739 3075ce5401f2ed5c84849f2f1c63ec29 686 SUPERFAMILY SSF51261 219 308 1.78E-13 T 13-10-2018 IPR011055 Duplicated hybrid motif Atc_2739 3075ce5401f2ed5c84849f2f1c63ec29 686 Gene3D G3DSA:2.70.70.10 192 321 2.7E-15 T 13-10-2018 IPR011055 Duplicated hybrid motif Atc_2739 3075ce5401f2ed5c84849f2f1c63ec29 686 SUPERFAMILY SSF53955 412 680 1.49E-25 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_2739 3075ce5401f2ed5c84849f2f1c63ec29 686 Pfam PF01551 Peptidase family M23 222 308 1.7E-13 T 13-10-2018 IPR016047 Peptidase M23 Atc_2739 3075ce5401f2ed5c84849f2f1c63ec29 686 Gene3D G3DSA:1.10.530.70 541 682 1.1E-10 T 13-10-2018 Atc_0648 2df79753931875187aa3ba935836e921 717 SUPERFAMILY SSF81442 54 576 3.92E-151 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 Gene3D G3DSA:1.20.210.10 41 585 7.3E-162 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 67 519 3.5E-121 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 167 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 58 83 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 197 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 318 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 367 388 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 235 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 479 500 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 246 265 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 402 420 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 343 358 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 449 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 PRINTS PR01165 Cytochrome c oxidase subunit I signature 116 139 2.2E-77 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0648 2df79753931875187aa3ba935836e921 717 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 299 353 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0219 8c5863bb0eaaea4ec69a272c78f4e342 238 Pfam PF00005 ABC transporter 47 178 2.3E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0219 8c5863bb0eaaea4ec69a272c78f4e342 238 SUPERFAMILY SSF52540 42 233 7.56E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0219 8c5863bb0eaaea4ec69a272c78f4e342 238 Gene3D G3DSA:3.40.50.300 26 238 1.6E-42 T 13-10-2018 Atc_0219 8c5863bb0eaaea4ec69a272c78f4e342 238 SMART SM00382 56 234 3.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0219 8c5863bb0eaaea4ec69a272c78f4e342 238 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0137 feb6b65844191c155b24fc06b0f4c106 586 PIRSF PIRSF001294 1 579 5.1E-218 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atc_0137 feb6b65844191c155b24fc06b0f4c106 586 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 577 33.094 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atc_0137 feb6b65844191c155b24fc06b0f4c106 586 Pfam PF03814 Potassium-transporting ATPase A subunit 11 575 6.4E-224 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atc_0137 feb6b65844191c155b24fc06b0f4c106 586 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 4 576 4.1E-207 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atc_2271 a0b2fd5a4ee1a384bc284b933a04a9f5 141 Pfam PF04241 Protein of unknown function (DUF423) 34 121 3.2E-18 T 13-10-2018 IPR006696 Protein of unknown function DUF423 Atc_0122 6b45228eb23922e6ef88d611953fe3d7 179 Pfam PF09335 SNARE associated Golgi protein 49 174 1.1E-19 T 13-10-2018 IPR032816 SNARE associated Golgi protein Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 Gene3D G3DSA:3.50.50.60 7 325 1.1E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 6.5E-48 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 457 8.6E-20 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PIRSF PIRSF000350 1 461 9.0E-68 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 SUPERFAMILY SSF51905 2 336 5.83E-46 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 SUPERFAMILY SSF55424 347 460 1.27E-26 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 Gene3D G3DSA:3.50.50.60 149 274 1.1E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 4.2E-53 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 4.2E-53 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 4.2E-53 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 4.2E-53 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 4.2E-53 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 4.2E-53 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 4.2E-53 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 4.2E-53 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.2E-53 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 Gene3D G3DSA:3.30.390.30 348 462 7.7E-26 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 8.4E-26 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 8.4E-26 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 8.4E-26 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 8.4E-26 T 13-10-2018 Atc_1002 ff98808ba97974af8f4e40337b8a5c68 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 8.4E-26 T 13-10-2018 Atc_0547 bee14e094ae9a996bd833bc4f6f683bd 114 SUPERFAMILY SSF82784 2 110 6.94E-29 T 13-10-2018 IPR036102 OsmC/Ohr superfamily Atc_0547 bee14e094ae9a996bd833bc4f6f683bd 114 Pfam PF02566 OsmC-like protein 4 108 3.8E-20 T 13-10-2018 IPR003718 OsmC/Ohr family Atc_0547 bee14e094ae9a996bd833bc4f6f683bd 114 Gene3D G3DSA:3.30.300.20 1 100 6.2E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Atc_1906 bee14e094ae9a996bd833bc4f6f683bd 114 SUPERFAMILY SSF82784 2 110 6.94E-29 T 13-10-2018 IPR036102 OsmC/Ohr superfamily Atc_1906 bee14e094ae9a996bd833bc4f6f683bd 114 Pfam PF02566 OsmC-like protein 4 108 3.8E-20 T 13-10-2018 IPR003718 OsmC/Ohr family Atc_1906 bee14e094ae9a996bd833bc4f6f683bd 114 Gene3D G3DSA:3.30.300.20 1 100 6.2E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Atc_0798 696cee8e0c873a30ea870efdd15283aa 293 SUPERFAMILY SSF48452 189 269 6.01E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0798 696cee8e0c873a30ea870efdd15283aa 293 Gene3D G3DSA:1.25.40.10 184 269 2.2E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 Gene3D G3DSA:3.30.930.10 1 206 1.7E-109 T 13-10-2018 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 3 283 58.624 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 289 5.8E-150 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 Gene3D G3DSA:1.20.58.180 207 288 8.8E-31 T 13-10-2018 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 5 281 2.3E-145 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 135 155 3.3E-66 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 243 259 3.3E-66 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 158 173 3.3E-66 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 78 98 3.3E-66 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 109 133 3.3E-66 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 57 72 3.3E-66 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atc_2388 df2b1a0a5bf411d525f5dcb0feeef1de 296 SUPERFAMILY SSF55681 3 282 2.12E-131 T 13-10-2018 Atc_2836 437f4875f9dbac59ab43c31bcc6ea3dc 171 Pfam PF02470 MlaD protein 39 116 1.1E-21 T 13-10-2018 IPR003399 Mce/MlaD Atc_2836 437f4875f9dbac59ab43c31bcc6ea3dc 171 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 6.4E-55 T 13-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 Atc_2330 af49cd549c45072e9cdc72a6d8b568de 382 SUPERFAMILY SSF51430 37 372 3.4E-32 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atc_2330 af49cd549c45072e9cdc72a6d8b568de 382 Pfam PF00248 Aldo/keto reductase family 48 374 2.4E-18 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atc_2330 af49cd549c45072e9cdc72a6d8b568de 382 Gene3D G3DSA:3.20.20.100 34 379 7.6E-27 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atc_2550 79b0422ba1736140a2482897a502bf50 494 Pfam PF00361 Proton-conducting membrane transporter 131 415 6.0E-81 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2550 79b0422ba1736140a2482897a502bf50 494 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 487 6.3E-189 T 13-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2550 79b0422ba1736140a2482897a502bf50 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 2.0E-47 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2550 79b0422ba1736140a2482897a502bf50 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 137 156 2.0E-47 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2550 79b0422ba1736140a2482897a502bf50 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 325 344 2.0E-47 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2550 79b0422ba1736140a2482897a502bf50 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 2.0E-47 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2550 79b0422ba1736140a2482897a502bf50 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 2.0E-47 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0009 db81a707d5271bfa8b31b984bd8c8586 108 PRINTS PR00354 7Fe ferredoxin signature 35 52 9.3E-15 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atc_0009 db81a707d5271bfa8b31b984bd8c8586 108 PRINTS PR00354 7Fe ferredoxin signature 9 19 9.3E-15 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atc_0009 db81a707d5271bfa8b31b984bd8c8586 108 PRINTS PR00354 7Fe ferredoxin signature 19 29 9.3E-15 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atc_0009 db81a707d5271bfa8b31b984bd8c8586 108 Gene3D G3DSA:3.30.70.20 2 99 1.7E-30 T 13-10-2018 Atc_0009 db81a707d5271bfa8b31b984bd8c8586 108 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atc_0009 db81a707d5271bfa8b31b984bd8c8586 108 Pfam PF11953 Domain of unknown function (DUF3470) 67 106 3.6E-19 T 13-10-2018 IPR022569 Ferredoxin, C-terminal Atc_0009 db81a707d5271bfa8b31b984bd8c8586 108 SUPERFAMILY SSF54862 3 101 1.63E-23 T 13-10-2018 Atc_0009 db81a707d5271bfa8b31b984bd8c8586 108 Pfam PF00037 4Fe-4S binding domain 35 55 3.2E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atc_2p10 de15135464868b3e3cb763ee8437cc83 209 SUPERFAMILY SSF52540 1 207 1.23E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2p10 de15135464868b3e3cb763ee8437cc83 209 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 182 4.0E-19 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_2p10 de15135464868b3e3cb763ee8437cc83 209 Gene3D G3DSA:3.40.50.300 1 208 3.2E-57 T 13-10-2018 Atc_2p10 de15135464868b3e3cb763ee8437cc83 209 PIRSF PIRSF009320 1 209 1.0E-65 T 13-10-2018 Atc_2746 a40546021001e9121cac99f6437ec776 337 Pfam PF00482 Type II secretion system (T2SS), protein F 198 324 7.4E-22 T 13-10-2018 IPR018076 Type II secretion system F domain Atc_2746 a40546021001e9121cac99f6437ec776 337 Gene3D G3DSA:1.20.81.30 185 302 3.2E-10 T 13-10-2018 Atc_1839 a38cb853e528aeedfb14cab83d77effc 370 SMART SM00382 50 224 0.0047 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1839 a38cb853e528aeedfb14cab83d77effc 370 Pfam PF13481 AAA domain 26 200 8.1E-41 T 13-10-2018 Atc_1839 a38cb853e528aeedfb14cab83d77effc 370 SUPERFAMILY SSF52540 40 235 5.81E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1839 a38cb853e528aeedfb14cab83d77effc 370 Gene3D G3DSA:3.40.50.300 31 253 6.8E-47 T 13-10-2018 Atc_m004 6fadc15b597280765a2342f6b12951d5 430 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 4 337 8.1E-14 T 13-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Atc_m004 6fadc15b597280765a2342f6b12951d5 430 Gene3D G3DSA:1.10.4160.10 1 338 6.1E-15 T 13-10-2018 IPR038271 Purine-cytosine permease superfamily Atc_1504 22d12f77b6cabf4118ee2afe26558a62 220 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 180 202 1.8E-5 T 13-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor Atc_1504 22d12f77b6cabf4118ee2afe26558a62 220 Gene3D G3DSA:3.30.420.10 3 166 1.1E-25 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_1504 22d12f77b6cabf4118ee2afe26558a62 220 SUPERFAMILY SSF53098 4 186 8.97E-27 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1504 22d12f77b6cabf4118ee2afe26558a62 220 SMART SM00479 2 163 1.2E-7 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atc_1504 22d12f77b6cabf4118ee2afe26558a62 220 Pfam PF00929 Exonuclease 4 148 9.5E-6 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atc_0338 71a83f6a0e31b050a719b99692e28841 146 Gene3D G3DSA:2.40.50.140 70 140 3.3E-5 T 13-10-2018 Atc_0338 71a83f6a0e31b050a719b99692e28841 146 Pfam PF01957 NfeD-like C-terminal, partner-binding 5 132 3.2E-8 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain Atc_1487 08d422009cdd7d0d160b25afea1b64cd 422 SUPERFAMILY SSF52540 70 336 7.32E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1487 08d422009cdd7d0d160b25afea1b64cd 422 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 119 330 6.3E-73 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_1487 08d422009cdd7d0d160b25afea1b64cd 422 Gene3D G3DSA:3.40.50.12240 1 412 3.0E-148 T 13-10-2018 Atc_1487 08d422009cdd7d0d160b25afea1b64cd 422 SMART SM00382 131 314 8.8E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1487 08d422009cdd7d0d160b25afea1b64cd 422 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 2 410 4.4E-168 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atc_0830 82136b8820d0848f404d0af88d68cb91 190 Gene3D G3DSA:1.20.1280.20 97 187 3.7E-19 T 13-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Atc_0830 82136b8820d0848f404d0af88d68cb91 190 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 16 188 17.718 T 13-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Atc_0830 82136b8820d0848f404d0af88d68cb91 190 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 28 186 4.8E-26 T 13-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Atc_0830 82136b8820d0848f404d0af88d68cb91 190 Gene3D G3DSA:1.10.287.110 1 87 6.8E-21 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Atc_0830 82136b8820d0848f404d0af88d68cb91 190 SUPERFAMILY SSF47144 99 187 4.32E-15 T 13-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Atc_0830 82136b8820d0848f404d0af88d68cb91 190 SUPERFAMILY SSF46565 17 87 8.11E-13 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Atc_0830 82136b8820d0848f404d0af88d68cb91 190 Pfam PF07743 HSCB C-terminal oligomerisation domain 105 181 2.6E-14 T 13-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Atc_1696 632f08a58374045848fd953eafa27e7a 165 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 1 129 16.563 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_1696 632f08a58374045848fd953eafa27e7a 165 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 2 130 8.4E-30 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_1696 632f08a58374045848fd953eafa27e7a 165 Gene3D G3DSA:2.60.15.10 1 127 7.9E-30 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_1696 632f08a58374045848fd953eafa27e7a 165 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 1 79 6.9E-23 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_1696 632f08a58374045848fd953eafa27e7a 165 SUPERFAMILY SSF51344 1 79 6.67E-19 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_1696 632f08a58374045848fd953eafa27e7a 165 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 82 2.0E-16 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atc_0438 a742d823ca189553e67c906b166ed287 219 Pfam PF00665 Integrase core domain 47 161 2.1E-29 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_0438 a742d823ca189553e67c906b166ed287 219 Gene3D G3DSA:3.30.420.10 42 189 6.7E-16 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_0438 a742d823ca189553e67c906b166ed287 219 SUPERFAMILY SSF53098 40 202 1.02E-39 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_2279 a912395d2ba27f66b914017214e6e53e 243 SMART SM00849 13 188 4.5E-12 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_2279 a912395d2ba27f66b914017214e6e53e 243 SUPERFAMILY SSF56281 1 172 3.92E-26 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_2279 a912395d2ba27f66b914017214e6e53e 243 Gene3D G3DSA:3.60.15.10 1 215 1.3E-35 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_0954 3547929adf5688744c6606bb90325e2c 395 Gene3D G3DSA:3.30.1490.20 125 198 3.9E-31 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atc_0954 3547929adf5688744c6606bb90325e2c 395 Gene3D G3DSA:3.40.50.20 3 124 4.0E-49 T 13-10-2018 Atc_0954 3547929adf5688744c6606bb90325e2c 395 SUPERFAMILY SSF56059 115 315 1.43E-60 T 13-10-2018 Atc_0954 3547929adf5688744c6606bb90325e2c 395 Pfam PF02222 ATP-grasp domain 125 297 1.6E-56 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Atc_0954 3547929adf5688744c6606bb90325e2c 395 SUPERFAMILY SSF52440 4 114 1.15E-31 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atc_0954 3547929adf5688744c6606bb90325e2c 395 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 9 393 51.453 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Atc_0954 3547929adf5688744c6606bb90325e2c 395 SUPERFAMILY SSF51246 321 391 1.48E-16 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atc_0954 3547929adf5688744c6606bb90325e2c 395 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 15 391 3.8E-170 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Atc_0954 3547929adf5688744c6606bb90325e2c 395 Gene3D G3DSA:3.30.470.20 199 394 7.4E-60 T 13-10-2018 Atc_0298 ddbf238c3e2befe621adfc92acf4bfd8 201 Pfam PF08241 Methyltransferase domain 47 132 1.4E-19 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atc_0298 ddbf238c3e2befe621adfc92acf4bfd8 201 Gene3D G3DSA:3.40.50.150 17 172 1.2E-27 T 13-10-2018 Atc_0298 ddbf238c3e2befe621adfc92acf4bfd8 201 SUPERFAMILY SSF53335 7 142 7.64E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1376 942332dbe7d8cda73d5b9c9aae23fedb 125 SUPERFAMILY SSF75169 9 125 1.85E-15 T 13-10-2018 IPR027396 DsrEFH-like Atc_1376 942332dbe7d8cda73d5b9c9aae23fedb 125 Gene3D G3DSA:3.40.1260.10 1 125 4.0E-27 T 13-10-2018 IPR027396 DsrEFH-like Atc_1376 942332dbe7d8cda73d5b9c9aae23fedb 125 Pfam PF02635 DsrE/DsrF-like family 10 101 3.4E-11 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_2137 53649a1a4b610b57fe002b82e40a0644 208 Pfam PF02195 ParB-like nuclease domain 23 75 6.3E-8 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_2137 53649a1a4b610b57fe002b82e40a0644 208 SUPERFAMILY SSF110849 18 93 1.41E-9 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atc_2137 53649a1a4b610b57fe002b82e40a0644 208 SUPERFAMILY SSF109709 86 173 6.15E-8 T 13-10-2018 Atc_2137 53649a1a4b610b57fe002b82e40a0644 208 Gene3D G3DSA:3.90.1530.30 18 77 3.5E-7 T 13-10-2018 Atc_2137 53649a1a4b610b57fe002b82e40a0644 208 Gene3D G3DSA:1.10.10.2830 81 186 5.8E-9 T 13-10-2018 Atc_m108 f3ce85204fe45982abca64dd1d4ca08c 140 Gene3D G3DSA:1.20.1290.10 1 130 6.2E-39 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atc_m108 f3ce85204fe45982abca64dd1d4ca08c 140 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 13 61 4.0E-13 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atc_m108 f3ce85204fe45982abca64dd1d4ca08c 140 Pfam PF02627 Carboxymuconolactone decarboxylase family 7 76 1.5E-17 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atc_m108 f3ce85204fe45982abca64dd1d4ca08c 140 SUPERFAMILY SSF69118 4 128 1.44E-36 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atc_0416 37bf89b3f8bf3934461327677421606b 240 SUPERFAMILY SSF53067 2 110 1.75E-7 T 13-10-2018 Atc_0416 37bf89b3f8bf3934461327677421606b 240 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 1 237 1.2E-31 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Atc_0416 37bf89b3f8bf3934461327677421606b 240 Gene3D G3DSA:3.30.420.40 3 235 1.8E-44 T 13-10-2018 Atc_0416 37bf89b3f8bf3934461327677421606b 240 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 240 15.514 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Atc_0416 37bf89b3f8bf3934461327677421606b 240 SUPERFAMILY SSF53067 116 239 7.77E-28 T 13-10-2018 Atc_0416 37bf89b3f8bf3934461327677421606b 240 Gene3D G3DSA:3.30.420.490 117 231 1.8E-44 T 13-10-2018 Atc_0416 37bf89b3f8bf3934461327677421606b 240 Pfam PF03309 Type III pantothenate kinase 1 193 6.7E-36 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Atc_2636 057cc96a7daa398659264ccb02120c82 255 Pfam PF00535 Glycosyl transferase family 2 8 156 2.5E-14 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atc_2636 057cc96a7daa398659264ccb02120c82 255 SUPERFAMILY SSF53448 5 198 4.61E-23 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2636 057cc96a7daa398659264ccb02120c82 255 Gene3D G3DSA:3.90.550.10 1 222 8.1E-20 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_1798 d4288652e6ff5404400111ac480806c9 405 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 93 142 5.1E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1798 d4288652e6ff5404400111ac480806c9 405 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 87 1.2E-11 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1798 d4288652e6ff5404400111ac480806c9 405 Pfam PF01610 Transposase 157 391 8.9E-74 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_2101 d4288652e6ff5404400111ac480806c9 405 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 93 142 5.1E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_2101 d4288652e6ff5404400111ac480806c9 405 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 87 1.2E-11 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_2101 d4288652e6ff5404400111ac480806c9 405 Pfam PF01610 Transposase 157 391 8.9E-74 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0110 bada363103ef59d504508698660e05f0 184 Pfam PF13515 Fusaric acid resistance protein-like 60 170 9.7E-8 T 13-10-2018 Atc_1338 b45a285f438b9a820961b620cc80fc90 444 SUPERFAMILY SSF51556 65 364 6.35E-96 T 13-10-2018 IPR032466 Metal-dependent hydrolase Atc_1338 b45a285f438b9a820961b620cc80fc90 444 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 8 438 39.328 T 13-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 Atc_1338 b45a285f438b9a820961b620cc80fc90 444 Pfam PF01979 Amidohydrolase family 62 411 1.4E-67 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atc_1338 b45a285f438b9a820961b620cc80fc90 444 Gene3D G3DSA:3.20.20.140 66 356 1.0E-159 T 13-10-2018 Atc_1338 b45a285f438b9a820961b620cc80fc90 444 SUPERFAMILY SSF51338 14 437 3.01E-27 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atc_1338 b45a285f438b9a820961b620cc80fc90 444 Gene3D G3DSA:2.30.40.10 22 430 1.0E-159 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atc_1742 f38dc7fbf2029469e75d3fcb26164791 265 Gene3D G3DSA:3.60.110.10 1 265 1.5E-88 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_1742 f38dc7fbf2029469e75d3fcb26164791 265 SUPERFAMILY SSF56317 2 263 1.1E-78 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_1742 f38dc7fbf2029469e75d3fcb26164791 265 Pfam PF00795 Carbon-nitrogen hydrolase 3 254 9.1E-50 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atc_2487 0a746a6766f6b131d2513e36eebe899b 369 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 322 341 7.0E-5 T 13-10-2018 Atc_2487 0a746a6766f6b131d2513e36eebe899b 369 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 248 258 7.0E-5 T 13-10-2018 Atc_2487 0a746a6766f6b131d2513e36eebe899b 369 SUPERFAMILY SSF56784 161 361 4.0E-48 T 13-10-2018 IPR036412 HAD-like superfamily Atc_2487 0a746a6766f6b131d2513e36eebe899b 369 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 163 334 1.5E-30 T 13-10-2018 Atc_2487 0a746a6766f6b131d2513e36eebe899b 369 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 162 362 9.4E-67 T 13-10-2018 Atc_2487 0a746a6766f6b131d2513e36eebe899b 369 Gene3D G3DSA:3.40.50.1000 123 367 9.2E-70 T 13-10-2018 IPR023214 HAD superfamily Atc_2487 0a746a6766f6b131d2513e36eebe899b 369 Pfam PF12710 haloacid dehalogenase-like hydrolase 165 333 1.9E-21 T 13-10-2018 Atc_2078 3063043601ef50f7ccfb6e53fb67cb77 117 Pfam PF00857 Isochorismatase family 31 94 5.6E-6 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 Atc_2078 3063043601ef50f7ccfb6e53fb67cb77 117 SUPERFAMILY SSF52499 27 93 2.22E-11 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atc_2078 3063043601ef50f7ccfb6e53fb67cb77 117 Gene3D G3DSA:3.40.50.850 6 107 3.5E-8 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atc_0834 d978be63ef8a8fbb203aacd64d8ca102 348 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 2 346 38.885 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Atc_0834 d978be63ef8a8fbb203aacd64d8ca102 348 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 345 2.7E-97 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Atc_0834 d978be63ef8a8fbb203aacd64d8ca102 348 Gene3D G3DSA:2.40.30.10 269 347 5.2E-22 T 13-10-2018 Atc_0834 d978be63ef8a8fbb203aacd64d8ca102 348 SUPERFAMILY SSF52402 3 237 3.31E-51 T 13-10-2018 Atc_0834 d978be63ef8a8fbb203aacd64d8ca102 348 Gene3D G3DSA:3.40.50.620 1 203 5.1E-73 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0834 d978be63ef8a8fbb203aacd64d8ca102 348 Pfam PF03054 tRNA methyl transferase 3 345 6.4E-111 T 13-10-2018 Atc_0834 d978be63ef8a8fbb203aacd64d8ca102 348 Gene3D G3DSA:2.30.30.280 207 266 3.5E-16 T 13-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Atc_2229 a231ec6c0868906f22242b59c43f9f96 261 Pfam PF04333 MlaA lipoprotein 35 226 3.1E-68 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Atc_2229 a231ec6c0868906f22242b59c43f9f96 261 PRINTS PR01805 VacJ lipoprotein signature 36 49 2.4E-27 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Atc_2229 a231ec6c0868906f22242b59c43f9f96 261 PRINTS PR01805 VacJ lipoprotein signature 140 157 2.4E-27 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Atc_2229 a231ec6c0868906f22242b59c43f9f96 261 PRINTS PR01805 VacJ lipoprotein signature 53 69 2.4E-27 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Atc_2229 a231ec6c0868906f22242b59c43f9f96 261 PRINTS PR01805 VacJ lipoprotein signature 104 121 2.4E-27 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Atc_1292 257b591ca7eed7b93da6010d1a83d2bb 505 Gene3D G3DSA:3.90.320.10 7 209 8.4E-23 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Atc_1292 257b591ca7eed7b93da6010d1a83d2bb 505 Pfam PF09588 YqaJ-like viral recombinase domain 13 150 4.1E-6 T 13-10-2018 IPR019080 YqaJ viral recombinase Atc_1292 257b591ca7eed7b93da6010d1a83d2bb 505 PIRSF PIRSF028503 2 436 5.5E-91 T 13-10-2018 IPR016889 Uncharacterised conserved protein UCP028503 Atc_1292 257b591ca7eed7b93da6010d1a83d2bb 505 PIRSF PIRSF028503 432 505 1.2E-5 T 13-10-2018 IPR016889 Uncharacterised conserved protein UCP028503 Atc_1292 257b591ca7eed7b93da6010d1a83d2bb 505 SUPERFAMILY SSF52980 3 189 2.68E-22 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Atc_1517 a2316d811e554d26aced1ebd81fe560e 154 Gene3D G3DSA:1.10.490.10 2 139 1.4E-38 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Atc_1517 a2316d811e554d26aced1ebd81fe560e 154 Pfam PF00042 Globin 4 98 1.1E-10 T 13-10-2018 IPR000971 Globin GO:0020037 Atc_1517 a2316d811e554d26aced1ebd81fe560e 154 SUPERFAMILY SSF46458 4 134 2.99E-32 T 13-10-2018 IPR009050 Globin-like superfamily Atc_1921 a2316d811e554d26aced1ebd81fe560e 154 Gene3D G3DSA:1.10.490.10 2 139 1.4E-38 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Atc_1921 a2316d811e554d26aced1ebd81fe560e 154 Pfam PF00042 Globin 4 98 1.1E-10 T 13-10-2018 IPR000971 Globin GO:0020037 Atc_1921 a2316d811e554d26aced1ebd81fe560e 154 SUPERFAMILY SSF46458 4 134 2.99E-32 T 13-10-2018 IPR009050 Globin-like superfamily Atc_2853 d0f8d265b649ad86cff3da76f1b46184 201 Gene3D G3DSA:3.40.30.10 2 194 4.8E-57 T 13-10-2018 Atc_2853 d0f8d265b649ad86cff3da76f1b46184 201 Gene3D G3DSA:1.20.1050.10 79 191 4.8E-57 T 13-10-2018 Atc_2853 d0f8d265b649ad86cff3da76f1b46184 201 SUPERFAMILY SSF47616 69 198 2.9E-9 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atc_2853 d0f8d265b649ad86cff3da76f1b46184 201 SUPERFAMILY SSF52833 1 100 1.43E-24 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2853 d0f8d265b649ad86cff3da76f1b46184 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 78 1.4E-22 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atc_m081 9812adf063e42208ce7efef3e1d4aafc 264 Pfam PF01987 Mitochondrial biogenesis AIM24 55 256 1.6E-19 T 13-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 Atc_m081 9812adf063e42208ce7efef3e1d4aafc 264 Gene3D G3DSA:3.60.160.10 49 259 5.6E-21 T 13-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily Atc_m081 9812adf063e42208ce7efef3e1d4aafc 264 SUPERFAMILY SSF51219 53 257 1.31E-25 T 13-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Atc_1497 afcf42627d223350264d65533fe8d46f 688 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 17 684 2.2E-260 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Atc_1497 afcf42627d223350264d65533fe8d46f 688 Gene3D G3DSA:1.10.490.80 590 685 1.8E-13 T 13-10-2018 Atc_1497 afcf42627d223350264d65533fe8d46f 688 Gene3D G3DSA:1.10.8.540 499 586 4.9E-24 T 13-10-2018 Atc_1497 afcf42627d223350264d65533fe8d46f 688 PIRSF PIRSF005419 7 688 2.3E-245 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atc_1497 afcf42627d223350264d65533fe8d46f 688 Gene3D G3DSA:3.40.30.60 355 498 8.7E-52 T 13-10-2018 Atc_1497 afcf42627d223350264d65533fe8d46f 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 138 154 1.4E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atc_1497 afcf42627d223350264d65533fe8d46f 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 238 252 1.4E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atc_1497 afcf42627d223350264d65533fe8d46f 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 1.4E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atc_1497 afcf42627d223350264d65533fe8d46f 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 1.4E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atc_1497 afcf42627d223350264d65533fe8d46f 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 157 175 1.4E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atc_1497 afcf42627d223350264d65533fe8d46f 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 187 204 1.4E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atc_1497 afcf42627d223350264d65533fe8d46f 688 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 143 166 - T 13-10-2018 IPR025505 FHIPEP conserved site Atc_1497 afcf42627d223350264d65533fe8d46f 688 Pfam PF00771 FHIPEP family 27 677 1.8E-262 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atc_1579 30d3ed4da6a625d1cec0501eaa234300 64 Gene3D G3DSA:1.10.10.10 1 64 1.9E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1579 30d3ed4da6a625d1cec0501eaa234300 64 SUPERFAMILY SSF46689 5 58 1.0E-4 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_2714 31c7febfa3e940ceec927bfc12a2e82c 247 SUPERFAMILY SSF52540 33 205 1.1E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2714 31c7febfa3e940ceec927bfc12a2e82c 247 Pfam PF01926 50S ribosome-binding GTPase 40 158 2.4E-17 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Atc_2714 31c7febfa3e940ceec927bfc12a2e82c 247 Gene3D G3DSA:3.40.50.300 13 215 1.2E-47 T 13-10-2018 Atc_2714 31c7febfa3e940ceec927bfc12a2e82c 247 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 26 207 24.516 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Atc_2714 31c7febfa3e940ceec927bfc12a2e82c 247 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 21 201 3.5E-60 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Atc_0748 a25e8d6d6f650d2a428e4a043b9db3e0 417 Pfam PF13657 HipA N-terminal domain 7 105 7.1E-23 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 Atc_0748 a25e8d6d6f650d2a428e4a043b9db3e0 417 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 7 105 1.8E-21 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 Atc_0748 a25e8d6d6f650d2a428e4a043b9db3e0 417 Pfam PF07804 HipA-like C-terminal domain 148 379 1.7E-48 T 13-10-2018 IPR012893 HipA-like, C-terminal Atc_2788 7cadf32253d70564a4e87dfd72a4ccc0 221 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 7 205 8.1E-58 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Atc_2788 7cadf32253d70564a4e87dfd72a4ccc0 221 Pfam PF01914 MarC family integral membrane protein 8 208 4.8E-55 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Atc_0999 593103b5dae60e362261b0e13d4992ad 176 SUPERFAMILY SSF52540 8 146 2.45E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0999 593103b5dae60e362261b0e13d4992ad 176 Gene3D G3DSA:3.40.50.300 7 153 7.6E-19 T 13-10-2018 Atc_0999 593103b5dae60e362261b0e13d4992ad 176 Pfam PF13671 AAA domain 8 149 4.6E-9 T 13-10-2018 Atc_0006 8588ce3d620ce6509260a1247b0ae885 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 82 17.788 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Atc_0006 8588ce3d620ce6509260a1247b0ae885 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 79 1.9E-23 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Atc_0006 8588ce3d620ce6509260a1247b0ae885 89 SUPERFAMILY SSF55229 33 82 4.71E-13 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Atc_0006 8588ce3d620ce6509260a1247b0ae885 89 Gene3D G3DSA:3.30.1070.10 1 81 5.7E-26 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Atc_0006 8588ce3d620ce6509260a1247b0ae885 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 80 3.2E-27 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Atc_1309 dd0cdc618277a9d6b4549b8235391aed 162 Gene3D G3DSA:3.40.50.300 8 148 9.8E-35 T 13-10-2018 Atc_1309 dd0cdc618277a9d6b4549b8235391aed 162 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 122 2.4E-31 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Atc_1309 dd0cdc618277a9d6b4549b8235391aed 162 SUPERFAMILY SSF52540 27 120 3.63E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1309 dd0cdc618277a9d6b4549b8235391aed 162 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 13 132 2.7E-32 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Atc_0184 f1b93d26a0c69a244d2caa2592c3eab3 323 SUPERFAMILY SSF49503 133 291 1.34E-42 T 13-10-2018 IPR008972 Cupredoxin Atc_0184 f1b93d26a0c69a244d2caa2592c3eab3 323 Gene3D G3DSA:2.60.40.420 121 292 1.4E-45 T 13-10-2018 IPR008972 Cupredoxin Atc_0184 f1b93d26a0c69a244d2caa2592c3eab3 323 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 160 234 3.7E-9 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0184 f1b93d26a0c69a244d2caa2592c3eab3 323 Gene3D G3DSA:1.10.287.90 32 115 2.3E-20 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0184 f1b93d26a0c69a244d2caa2592c3eab3 323 SUPERFAMILY SSF81464 20 120 6.54E-16 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0184 f1b93d26a0c69a244d2caa2592c3eab3 323 Pfam PF06481 COX Aromatic Rich Motif 248 294 1.9E-6 T 13-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 Atc_0677 ba80bea327145ee9e38da8d506ddee18 948 Gene3D G3DSA:3.40.720.10 625 862 3.3E-6 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atc_0677 ba80bea327145ee9e38da8d506ddee18 948 Pfam PF04185 Phosphoesterase family 527 837 5.2E-5 T 13-10-2018 IPR007312 Phosphoesterase GO:0016788 Atc_0677 ba80bea327145ee9e38da8d506ddee18 948 SUPERFAMILY SSF75011 129 414 6.15E-25 T 13-10-2018 Atc_0677 ba80bea327145ee9e38da8d506ddee18 948 SUPERFAMILY SSF53649 696 860 1.01E-5 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Atc_0677 ba80bea327145ee9e38da8d506ddee18 948 Gene3D G3DSA:3.40.720.10 488 560 3.3E-6 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atc_0677 ba80bea327145ee9e38da8d506ddee18 948 Gene3D G3DSA:2.130.10.10 131 243 1.0E-7 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_0677 ba80bea327145ee9e38da8d506ddee18 948 Gene3D G3DSA:2.130.10.10 252 423 1.2E-16 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_0363 7ee0d9ba391ae93dea9569eaaadd7034 332 Gene3D G3DSA:3.30.200.20 10 90 6.1E-12 T 13-10-2018 Atc_0363 7ee0d9ba391ae93dea9569eaaadd7034 332 Gene3D G3DSA:3.90.1200.10 91 331 5.3E-67 T 13-10-2018 Atc_0363 7ee0d9ba391ae93dea9569eaaadd7034 332 SUPERFAMILY SSF56112 11 311 1.35E-46 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Atc_0363 7ee0d9ba391ae93dea9569eaaadd7034 332 Pfam PF01636 Phosphotransferase enzyme family 28 248 3.7E-21 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase Atc_2432 9951fa86f3d72c56a93a022ee6567117 265 SUPERFAMILY SSF64438 6 262 9.34E-74 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Atc_2432 9951fa86f3d72c56a93a022ee6567117 265 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 24 260 5.6E-73 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Atc_2432 9951fa86f3d72c56a93a022ee6567117 265 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 28 261 4.5E-53 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Atc_2432 9951fa86f3d72c56a93a022ee6567117 265 Gene3D G3DSA:3.60.140.10 1 263 2.5E-85 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Atc_1010 28fffe5d48b6539dd6f3ae8e609cd117 293 PIRSF PIRSF035875 13 292 3.0E-40 T 13-10-2018 IPR017039 Virulence factor BrkB Atc_1010 28fffe5d48b6539dd6f3ae8e609cd117 293 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 42 284 5.5E-43 T 13-10-2018 IPR017039 Virulence factor BrkB Atc_1010 28fffe5d48b6539dd6f3ae8e609cd117 293 Pfam PF03631 Virulence factor BrkB 45 287 6.5E-48 T 13-10-2018 IPR017039 Virulence factor BrkB Atc_2773 696ac797acc7aa4ed3b05d10247282bc 130 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 74 126 2.0E-7 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Atc_2773 696ac797acc7aa4ed3b05d10247282bc 130 Pfam PF01106 NifU-like domain 63 126 1.1E-16 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Atc_2773 696ac797acc7aa4ed3b05d10247282bc 130 SUPERFAMILY SSF117916 57 125 3.49E-14 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Atc_2773 696ac797acc7aa4ed3b05d10247282bc 130 Gene3D G3DSA:3.30.300.130 58 130 5.1E-18 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Atc_3p07 1fb4bfe128ee7a4996b27ea91b4578cc 186 SMART SM00226 28 162 3.8E-42 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Atc_3p07 1fb4bfe128ee7a4996b27ea91b4578cc 186 SUPERFAMILY SSF52788 28 162 6.67E-40 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Atc_3p07 1fb4bfe128ee7a4996b27ea91b4578cc 186 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 30 159 3.7E-22 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Atc_3p07 1fb4bfe128ee7a4996b27ea91b4578cc 186 Gene3D G3DSA:3.40.50.2300 26 162 1.6E-39 T 13-10-2018 Atc_1133 87d231aae85f486393ac0d82c5d720cf 718 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 173 189 5.0E-11 T 13-10-2018 Atc_1133 87d231aae85f486393ac0d82c5d720cf 718 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 206 220 5.0E-11 T 13-10-2018 Atc_1133 87d231aae85f486393ac0d82c5d720cf 718 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 278 290 5.0E-11 T 13-10-2018 Atc_1133 87d231aae85f486393ac0d82c5d720cf 718 SUPERFAMILY SSF53335 4 531 1.41E-108 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1133 87d231aae85f486393ac0d82c5d720cf 718 Pfam PF02384 N-6 DNA Methylase 152 450 6.7E-54 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Atc_1133 87d231aae85f486393ac0d82c5d720cf 718 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 281 287 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_1133 87d231aae85f486393ac0d82c5d720cf 718 Pfam PF12161 HsdM N-terminal domain 6 138 1.2E-13 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Atc_1133 87d231aae85f486393ac0d82c5d720cf 718 Gene3D G3DSA:3.40.50.150 152 464 1.1E-85 T 13-10-2018 Atc_2879 7247fad0a44f948503addc3a42c3a13b 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_2879 7247fad0a44f948503addc3a42c3a13b 427 Gene3D G3DSA:3.90.1150.10 8 419 3.3E-179 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_2879 7247fad0a44f948503addc3a42c3a13b 427 SUPERFAMILY SSF53383 3 425 1.31E-135 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_2879 7247fad0a44f948503addc3a42c3a13b 427 Gene3D G3DSA:3.40.640.10 71 319 3.3E-179 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_2879 7247fad0a44f948503addc3a42c3a13b 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 9.8E-190 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Atc_2879 7247fad0a44f948503addc3a42c3a13b 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 105.721 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Atc_2879 7247fad0a44f948503addc3a42c3a13b 427 Pfam PF00202 Aminotransferase class-III 36 396 1.5E-77 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atc_2555 415e12036fff71d27bee15953a980eb9 65 Pfam PF01632 Ribosomal protein L35 2 62 9.5E-26 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2555 415e12036fff71d27bee15953a980eb9 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.4E-26 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Atc_2555 415e12036fff71d27bee15953a980eb9 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_2555 415e12036fff71d27bee15953a980eb9 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.3E-21 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Atc_2555 415e12036fff71d27bee15953a980eb9 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.3E-21 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Atc_2555 415e12036fff71d27bee15953a980eb9 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.3E-21 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Atc_2555 415e12036fff71d27bee15953a980eb9 65 SUPERFAMILY SSF143034 2 64 7.19E-25 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_2555 415e12036fff71d27bee15953a980eb9 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.357 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Atc_2555 415e12036fff71d27bee15953a980eb9 65 Gene3D G3DSA:2.40.50.530 1 65 3.6E-23 T 13-10-2018 Atc_1979 077f49bd413264ebb6d12de8e64b3ed3 554 Pfam PF13384 Homeodomain-like domain 28 76 2.5E-8 T 13-10-2018 Atc_1979 077f49bd413264ebb6d12de8e64b3ed3 554 SUPERFAMILY SSF46689 24 141 1.88E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_m087 26edaefe2ce60080815c5a3c94f9c94a 131 Pfam PF03625 Domain of unknown function DUF302 36 99 1.6E-28 T 13-10-2018 IPR005180 Domain of unknown function DUF302 Atc_m087 26edaefe2ce60080815c5a3c94f9c94a 131 SUPERFAMILY SSF103247 5 129 6.41E-37 T 13-10-2018 IPR035923 TT1751-like domain superfamily Atc_m087 26edaefe2ce60080815c5a3c94f9c94a 131 PIRSF PIRSF021774 1 131 3.4E-43 T 13-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 Atc_m087 26edaefe2ce60080815c5a3c94f9c94a 131 Gene3D G3DSA:3.30.310.70 6 129 1.8E-45 T 13-10-2018 IPR035923 TT1751-like domain superfamily Atc_1708 62c3b46c0f30f25cba6a84dfce95217d 263 Pfam PF02616 Segregation and condensation protein ScpA 40 131 1.2E-14 T 13-10-2018 IPR003768 Segregation and condensation protein A Atc_2493 0dd2556a76599a051ef1e03318e08297 120 Pfam PF12732 YtxH-like protein 6 71 6.3E-14 T 13-10-2018 IPR024623 Uncharacterised protein family YtxH Atc_0069 5e6a31eb309844e308ffb3054a718925 281 SUPERFAMILY SSF56655 16 262 2.49E-62 T 13-10-2018 Atc_0069 5e6a31eb309844e308ffb3054a718925 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 4.5E-25 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0069 5e6a31eb309844e308ffb3054a718925 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 136 159 4.5E-25 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0069 5e6a31eb309844e308ffb3054a718925 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 4.5E-25 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0069 5e6a31eb309844e308ffb3054a718925 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 4.5E-25 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0069 5e6a31eb309844e308ffb3054a718925 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 4.5E-25 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0069 5e6a31eb309844e308ffb3054a718925 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 4.5E-25 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0069 5e6a31eb309844e308ffb3054a718925 281 Gene3D G3DSA:3.40.190.80 152 265 1.9E-19 T 13-10-2018 Atc_0069 5e6a31eb309844e308ffb3054a718925 281 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 212 226 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Atc_0069 5e6a31eb309844e308ffb3054a718925 281 Pfam PF00459 Inositol monophosphatase family 13 245 2.9E-46 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atc_0069 5e6a31eb309844e308ffb3054a718925 281 Gene3D G3DSA:3.30.540.10 4 145 1.3E-36 T 13-10-2018 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 4.4E-22 T 13-10-2018 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 278 285 4.4E-22 T 13-10-2018 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.4E-22 T 13-10-2018 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.4E-22 T 13-10-2018 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 438 1.1E-12 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 Gene3D G3DSA:3.50.50.60 109 442 7.3E-100 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 9.9E-25 T 13-10-2018 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 9.9E-25 T 13-10-2018 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 9.9E-25 T 13-10-2018 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 9.9E-25 T 13-10-2018 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 9.9E-25 T 13-10-2018 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 SUPERFAMILY SSF51905 2 315 3.42E-42 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 302 6.4E-53 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 SUPERFAMILY SSF55424 329 446 5.67E-21 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atc_1532 ac7f0ce0714f9716d852c25f34e7193e 467 Gene3D G3DSA:3.50.50.60 8 343 7.3E-100 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0309 f525688ed79ea6908fa826439d176775 393 Pfam PF00155 Aminotransferase class I and II 32 376 4.7E-60 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atc_0309 f525688ed79ea6908fa826439d176775 393 Gene3D G3DSA:3.90.1150.10 289 386 1.8E-130 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_0309 f525688ed79ea6908fa826439d176775 393 SUPERFAMILY SSF53383 2 390 5.78E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_0309 f525688ed79ea6908fa826439d176775 393 Gene3D G3DSA:3.40.640.10 64 288 1.8E-130 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_1435 3d0b3b444d8270611a0e91bc296369a8 336 SUPERFAMILY SSF52540 16 218 9.82E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1435 3d0b3b444d8270611a0e91bc296369a8 336 ProSitePatterns PS00211 ABC transporters family signature. 114 128 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_1435 3d0b3b444d8270611a0e91bc296369a8 336 Pfam PF00005 ABC transporter 17 142 1.9E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_1435 3d0b3b444d8270611a0e91bc296369a8 336 Gene3D G3DSA:3.40.50.300 4 240 9.5E-60 T 13-10-2018 Atc_1435 3d0b3b444d8270611a0e91bc296369a8 336 SMART SM00382 20 205 1.5E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2785 673df3a5f0c96d88aee95be4d4bcd338 166 Gene3D G3DSA:3.40.1260.10 50 166 3.1E-30 T 13-10-2018 IPR027396 DsrEFH-like Atc_2785 673df3a5f0c96d88aee95be4d4bcd338 166 Pfam PF02635 DsrE/DsrF-like family 51 166 1.3E-8 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_2785 673df3a5f0c96d88aee95be4d4bcd338 166 SUPERFAMILY SSF75169 52 166 3.41E-21 T 13-10-2018 IPR027396 DsrEFH-like Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 Pfam PF13570 PQQ-like domain 397 436 5.7E-4 T 13-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 Pfam PF13360 PQQ-like domain 201 361 4.4E-13 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 SUPERFAMILY SSF50998 343 448 5.49E-15 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 SMART SM00564 117 149 5.1E-6 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 SMART SM00564 413 444 4.1 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 SMART SM00564 225 257 1.8E-4 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 SMART SM00564 269 301 94.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 SMART SM00564 162 217 800.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 Gene3D G3DSA:2.130.10.10 365 478 3.9E-13 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 Gene3D G3DSA:2.130.10.10 188 364 1.4E-23 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 Gene3D G3DSA:2.40.10.480 117 184 9.5E-10 T 13-10-2018 Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 Pfam PF01011 PQQ enzyme repeat 123 149 1.2E-6 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atc_0905 ffd788c7a649f0fa5a9d4e9242447f9d 485 SUPERFAMILY SSF50998 58 355 1.31E-25 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Atc_1714 55a68605b9a55333506e2249791f4864 754 SUPERFAMILY SSF82689 633 737 1.1E-17 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Atc_1714 55a68605b9a55333506e2249791f4864 754 SUPERFAMILY SSF82861 480 564 1.57E-11 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Atc_1714 55a68605b9a55333506e2249791f4864 754 Gene3D G3DSA:2.30.30.60 581 630 2.1E-15 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Atc_1714 55a68605b9a55333506e2249791f4864 754 Gene3D G3DSA:3.30.70.100 633 731 2.8E-12 T 13-10-2018 Atc_1714 55a68605b9a55333506e2249791f4864 754 SUPERFAMILY SSF50182 565 630 8.83E-19 T 13-10-2018 IPR010920 LSM domain superfamily Atc_1714 55a68605b9a55333506e2249791f4864 754 Pfam PF00924 Mechanosensitive ion channel 524 726 2.1E-46 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Atc_1714 55a68605b9a55333506e2249791f4864 754 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 595 629 - T 13-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 Atc_2688 4e519e575d158a65e912847ecf5911fb 411 SUPERFAMILY SSF81324 186 286 4.19E-22 T 13-10-2018 Atc_2688 4e519e575d158a65e912847ecf5911fb 411 SUPERFAMILY SSF51735 261 393 1.18E-20 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2688 4e519e575d158a65e912847ecf5911fb 411 Gene3D G3DSA:3.40.50.720 260 402 3.9E-25 T 13-10-2018 Atc_2688 4e519e575d158a65e912847ecf5911fb 411 Pfam PF07885 Ion channel 169 241 1.8E-15 T 13-10-2018 IPR013099 Potassium channel domain Atc_2688 4e519e575d158a65e912847ecf5911fb 411 Gene3D G3DSA:1.10.287.70 149 244 2.9E-17 T 13-10-2018 Atc_2688 4e519e575d158a65e912847ecf5911fb 411 Pfam PF02254 TrkA-N domain 266 378 8.8E-14 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Atc_2808 c96387fdc056b3852dcdfe12da7b9d4e 262 Gene3D G3DSA:3.40.50.10090 39 171 5.0E-69 T 13-10-2018 Atc_2808 c96387fdc056b3852dcdfe12da7b9d4e 262 Pfam PF02602 Uroporphyrinogen-III synthase HemD 21 248 2.0E-56 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2808 c96387fdc056b3852dcdfe12da7b9d4e 262 SUPERFAMILY SSF69618 7 253 1.7E-67 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atc_2808 c96387fdc056b3852dcdfe12da7b9d4e 262 Gene3D G3DSA:3.40.50.10090 10 246 5.0E-69 T 13-10-2018 Atc_m253 b256fa342dc4b77fae33143ba6205b13 214 Pfam PF00872 Transposase, Mutator family 35 189 7.1E-16 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Atc_1342 179ede70bfc5037a609f765213d87375 293 PIRSF PIRSF006232 17 290 3.7E-82 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Atc_1342 179ede70bfc5037a609f765213d87375 293 Gene3D G3DSA:2.60.120.10 158 264 5.5E-81 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_1342 179ede70bfc5037a609f765213d87375 293 Gene3D G3DSA:2.60.120.10 32 286 5.5E-81 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_1342 179ede70bfc5037a609f765213d87375 293 Pfam PF02678 Pirin 45 136 8.9E-35 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Atc_1342 179ede70bfc5037a609f765213d87375 293 Pfam PF05726 Pirin C-terminal cupin domain 193 286 1.5E-16 T 13-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 Atc_1342 179ede70bfc5037a609f765213d87375 293 SUPERFAMILY SSF51182 23 286 2.19E-70 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Atc_1711 1d66a5d183a00cd0b1a71bf7918edaea 211 Gene3D G3DSA:3.90.870.10 2 203 3.0E-55 T 13-10-2018 Atc_1711 1d66a5d183a00cd0b1a71bf7918edaea 211 SUPERFAMILY SSF55821 5 201 7.63E-53 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Atc_1711 1d66a5d183a00cd0b1a71bf7918edaea 211 Pfam PF01300 Telomere recombination 23 198 9.9E-39 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Atc_1711 1d66a5d183a00cd0b1a71bf7918edaea 211 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 200 7.2E-52 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Atc_0965 d5898ae335188c971d9fbb7f5c27aa1e 247 Pfam PF00849 RNA pseudouridylate synthase 65 196 2.8E-15 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_0965 d5898ae335188c971d9fbb7f5c27aa1e 247 SUPERFAMILY SSF55120 65 230 1.92E-36 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_0965 d5898ae335188c971d9fbb7f5c27aa1e 247 Gene3D G3DSA:3.30.70.580 66 223 7.7E-45 T 13-10-2018 Atc_0965 d5898ae335188c971d9fbb7f5c27aa1e 247 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 226 5.4E-38 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Atc_0965 d5898ae335188c971d9fbb7f5c27aa1e 247 Gene3D G3DSA:3.10.290.10 5 58 2.0E-9 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atc_0965 d5898ae335188c971d9fbb7f5c27aa1e 247 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Atc_0965 d5898ae335188c971d9fbb7f5c27aa1e 247 SUPERFAMILY SSF55174 6 96 2.35E-10 T 13-10-2018 Atc_0965 d5898ae335188c971d9fbb7f5c27aa1e 247 Gene3D G3DSA:3.30.70.1560 125 215 7.7E-45 T 13-10-2018 Atc_0965 d5898ae335188c971d9fbb7f5c27aa1e 247 Pfam PF01479 S4 domain 6 41 1.1E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 Pfam PF00361 Proton-conducting membrane transporter 142 423 1.2E-90 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 436 458 8.7E-10 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 282 304 8.7E-10 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 67 91 8.7E-10 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 45 64 8.7E-10 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 93 113 8.7E-10 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 16 656 9.1E-232 T 13-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 263 9.5E-64 T 13-10-2018 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 437 456 9.5E-64 T 13-10-2018 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 332 344 9.5E-64 T 13-10-2018 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 166 187 9.5E-64 T 13-10-2018 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 264 290 9.5E-64 T 13-10-2018 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 116 9.5E-64 T 13-10-2018 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 119 139 9.5E-64 T 13-10-2018 Atc_2549 c9fe7fa3abc9dd90860465885f3e9a2c 660 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 73 129 1.5E-24 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0571 7802bb0921d23d8e20872080208f5c6f 114 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 29.651 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0571 7802bb0921d23d8e20872080208f5c6f 114 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 112 8.5E-49 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0571 7802bb0921d23d8e20872080208f5c6f 114 Pfam PF01245 Ribosomal protein L19 2 112 4.4E-49 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0571 7802bb0921d23d8e20872080208f5c6f 114 Gene3D G3DSA:2.30.30.790 16 113 1.4E-12 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0571 7802bb0921d23d8e20872080208f5c6f 114 PIRSF PIRSF002191 1 114 2.9E-49 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0571 7802bb0921d23d8e20872080208f5c6f 114 SUPERFAMILY SSF50104 1 113 5.21E-46 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Atc_0571 7802bb0921d23d8e20872080208f5c6f 114 PRINTS PR00061 Ribosomal protein L19 signature 87 112 2.3E-39 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0571 7802bb0921d23d8e20872080208f5c6f 114 PRINTS PR00061 Ribosomal protein L19 signature 3 32 2.3E-39 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0571 7802bb0921d23d8e20872080208f5c6f 114 PRINTS PR00061 Ribosomal protein L19 signature 33 62 2.3E-39 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0571 7802bb0921d23d8e20872080208f5c6f 114 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0422 3794da70e328c1c555036661335e9b3d 113 Gene3D G3DSA:3.30.110.60 1 98 3.8E-26 T 13-10-2018 IPR035920 YhbY-like superfamily Atc_0422 3794da70e328c1c555036661335e9b3d 113 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 7.3E-17 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Atc_0422 3794da70e328c1c555036661335e9b3d 113 SMART SM01103 2 85 1.4E-29 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Atc_0422 3794da70e328c1c555036661335e9b3d 113 SUPERFAMILY SSF75471 1 91 3.01E-23 T 13-10-2018 IPR035920 YhbY-like superfamily Atc_0422 3794da70e328c1c555036661335e9b3d 113 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 10 88 7.0E-16 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Atc_1752 633c16bf4729fef045aba5df4585bee4 490 SUPERFAMILY SSF143968 323 484 4.71E-62 T 13-10-2018 Atc_1752 633c16bf4729fef045aba5df4585bee4 490 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 3.1E-157 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Atc_1752 633c16bf4729fef045aba5df4585bee4 490 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.6E-162 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Atc_1752 633c16bf4729fef045aba5df4585bee4 490 Gene3D G3DSA:1.20.5.570 455 488 7.7E-12 T 13-10-2018 Atc_1752 633c16bf4729fef045aba5df4585bee4 490 Gene3D G3DSA:3.40.1670.10 337 454 3.5E-46 T 13-10-2018 Atc_1752 633c16bf4729fef045aba5df4585bee4 490 SUPERFAMILY SSF50475 3 322 2.55E-118 T 13-10-2018 Atc_1598 c2e2b21e229d3073bdd56e9e8ee9cfcd 137 SUPERFAMILY SSF81901 23 111 1.31E-22 T 13-10-2018 Atc_1598 c2e2b21e229d3073bdd56e9e8ee9cfcd 137 Pfam PF08238 Sel1 repeat 32 67 5.1E-7 T 13-10-2018 IPR006597 Sel1-like repeat Atc_1598 c2e2b21e229d3073bdd56e9e8ee9cfcd 137 Pfam PF08238 Sel1 repeat 68 103 7.9E-9 T 13-10-2018 IPR006597 Sel1-like repeat Atc_1598 c2e2b21e229d3073bdd56e9e8ee9cfcd 137 SMART SM00671 32 67 3.3E-9 T 13-10-2018 IPR006597 Sel1-like repeat Atc_1598 c2e2b21e229d3073bdd56e9e8ee9cfcd 137 SMART SM00671 68 103 1.1E-8 T 13-10-2018 IPR006597 Sel1-like repeat Atc_1598 c2e2b21e229d3073bdd56e9e8ee9cfcd 137 Gene3D G3DSA:1.25.40.10 17 125 2.5E-30 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_1751 5a7bdf3a242e3c49f935912fb64029ae 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 9.2E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1751 5a7bdf3a242e3c49f935912fb64029ae 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 9.2E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1751 5a7bdf3a242e3c49f935912fb64029ae 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 48 9.2E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1751 5a7bdf3a242e3c49f935912fb64029ae 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 9.2E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1751 5a7bdf3a242e3c49f935912fb64029ae 102 SMART SM00418 16 94 1.1E-23 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1751 5a7bdf3a242e3c49f935912fb64029ae 102 SUPERFAMILY SSF46785 5 97 1.35E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1751 5a7bdf3a242e3c49f935912fb64029ae 102 Gene3D G3DSA:1.10.10.10 2 98 1.8E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1751 5a7bdf3a242e3c49f935912fb64029ae 102 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 3.0E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0776 8ffbaa004503e8d1c0f7783f0cb126b0 143 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 72 136 1.7E-26 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atc_0776 8ffbaa004503e8d1c0f7783f0cb126b0 143 SUPERFAMILY SSF51735 14 76 4.28E-11 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0776 8ffbaa004503e8d1c0f7783f0cb126b0 143 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 12 52 4.6E-11 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atc_0776 8ffbaa004503e8d1c0f7783f0cb126b0 143 Gene3D G3DSA:1.20.5.100 76 102 1.8E-16 T 13-10-2018 Atc_0776 8ffbaa004503e8d1c0f7783f0cb126b0 143 Gene3D G3DSA:3.40.50.720 103 140 8.3E-12 T 13-10-2018 Atc_0776 8ffbaa004503e8d1c0f7783f0cb126b0 143 SUPERFAMILY SSF48179 72 136 8.16E-25 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atc_0776 8ffbaa004503e8d1c0f7783f0cb126b0 143 Gene3D G3DSA:3.40.50.720 2 75 2.2E-19 T 13-10-2018 Atc_1888 b7655f2159c0d1f90b85cc31162bea4a 68 SUPERFAMILY SSF55008 3 66 3.53E-19 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atc_1888 b7655f2159c0d1f90b85cc31162bea4a 68 Pfam PF00403 Heavy-metal-associated domain 7 63 2.1E-14 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atc_1888 b7655f2159c0d1f90b85cc31162bea4a 68 Gene3D G3DSA:3.30.70.100 4 67 3.1E-23 T 13-10-2018 Atc_1888 b7655f2159c0d1f90b85cc31162bea4a 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atc_2153 0f89d8504c2a1277a54afc59f2bae4de 385 PIRSF PIRSF004925 1 384 1.8E-95 T 13-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter Atc_2153 0f89d8504c2a1277a54afc59f2bae4de 385 Gene3D G3DSA:1.20.1250.20 191 380 1.4E-35 T 13-10-2018 Atc_2153 0f89d8504c2a1277a54afc59f2bae4de 385 Pfam PF12832 MFS_1 like family 8 357 2.6E-63 T 13-10-2018 IPR024989 Major facilitator superfamily associated domain Atc_2153 0f89d8504c2a1277a54afc59f2bae4de 385 Gene3D G3DSA:1.20.1250.20 4 184 1.7E-22 T 13-10-2018 Atc_2153 0f89d8504c2a1277a54afc59f2bae4de 385 SUPERFAMILY SSF103473 8 378 7.46E-44 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_0673 49da596c3ba32f06e32939cb353b1308 200 Gene3D G3DSA:3.30.420.10 1 181 1.2E-69 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_0673 49da596c3ba32f06e32939cb353b1308 200 SUPERFAMILY SSF53098 4 178 3.33E-45 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_0673 49da596c3ba32f06e32939cb353b1308 200 Pfam PF00929 Exonuclease 9 168 2.9E-30 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atc_0673 49da596c3ba32f06e32939cb353b1308 200 SMART SM00479 7 179 4.2E-25 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atc_0673 49da596c3ba32f06e32939cb353b1308 200 Hamap MF_00045 Oligoribonuclease [orn]. 3 180 40.027 T 13-10-2018 IPR022894 Oligoribonuclease GO:0000175 Atc_1168 1559d0ea67c68d27be5998d6e541d6ec 544 Pfam PF07655 Secretin N-terminal domain 178 263 7.4E-5 T 13-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 Atc_1168 1559d0ea67c68d27be5998d6e541d6ec 544 TIGRFAM TIGR02520 pilus_B_mal_scr: type IVB pilus formation outer membrane protein, R64 PilN family 72 540 5.4E-87 T 13-10-2018 IPR013359 Pilus formation type IVB, outer membrane PilN Atc_1168 1559d0ea67c68d27be5998d6e541d6ec 544 Pfam PF00263 Bacterial type II and III secretion system protein 381 543 5.2E-11 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Atc_1168 1559d0ea67c68d27be5998d6e541d6ec 544 ProDom PD128112 MEMBRANE OUTER PILUS LIPOPROTEIN BIOSYNTHESIS C TOXIN-COREGULATED TOXIN COFD TCPC 402 541 9.0E-5 T 13-10-2018 Atc_2794 5ff0d400e1e913f890d6044163f86ceb 250 SUPERFAMILY SSF75625 3 245 9.55E-96 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2794 5ff0d400e1e913f890d6044163f86ceb 250 Pfam PF01709 Transcriptional regulator 5 235 5.8E-96 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2794 5ff0d400e1e913f890d6044163f86ceb 250 Gene3D G3DSA:3.30.70.980 130 204 1.9E-56 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2794 5ff0d400e1e913f890d6044163f86ceb 250 Gene3D G3DSA:3.30.70.980 85 235 1.9E-56 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2794 5ff0d400e1e913f890d6044163f86ceb 250 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.072 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2794 5ff0d400e1e913f890d6044163f86ceb 250 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.4E-98 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2794 5ff0d400e1e913f890d6044163f86ceb 250 Gene3D G3DSA:1.10.10.200 1 80 5.4E-34 T 13-10-2018 IPR017856 Integrase-like, N-terminal Atc_2591 aafa41ea2fc978a795056198908a9e14 153 SUPERFAMILY SSF74982 3 129 9.55E-51 T 13-10-2018 IPR023620 Small protein B Atc_2591 aafa41ea2fc978a795056198908a9e14 153 ProSitePatterns PS01317 SsrA-binding protein. 23 35 - T 13-10-2018 IPR020081 SsrA-binding protein, conserved site Atc_2591 aafa41ea2fc978a795056198908a9e14 153 Pfam PF01668 SmpB protein 5 147 1.0E-60 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Atc_2591 aafa41ea2fc978a795056198908a9e14 153 Hamap MF_00023 SsrA-binding protein [smpB]. 1 152 74.573 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Atc_2591 aafa41ea2fc978a795056198908a9e14 153 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 5 129 6.0E-49 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Atc_2591 aafa41ea2fc978a795056198908a9e14 153 TIGRFAM TIGR00086 smpB: SsrA-binding protein 5 147 4.1E-56 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Atc_2591 aafa41ea2fc978a795056198908a9e14 153 Gene3D G3DSA:2.40.280.10 1 126 5.4E-49 T 13-10-2018 IPR023620 Small protein B Atc_1889 8d3c19a904b5cce858da68c8bf4eeccd 131 Pfam PF03625 Domain of unknown function DUF302 36 99 2.8E-27 T 13-10-2018 IPR005180 Domain of unknown function DUF302 Atc_1889 8d3c19a904b5cce858da68c8bf4eeccd 131 SUPERFAMILY SSF103247 6 125 3.4E-35 T 13-10-2018 IPR035923 TT1751-like domain superfamily Atc_1889 8d3c19a904b5cce858da68c8bf4eeccd 131 PIRSF PIRSF021774 1 131 2.1E-39 T 13-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 Atc_1889 8d3c19a904b5cce858da68c8bf4eeccd 131 Gene3D G3DSA:3.30.310.70 5 128 6.0E-43 T 13-10-2018 IPR035923 TT1751-like domain superfamily Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 Gene3D G3DSA:3.40.50.740 460 642 2.3E-14 T 13-10-2018 Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 Gene3D G3DSA:3.40.50.740 72 153 3.6E-41 T 13-10-2018 Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 Gene3D G3DSA:2.20.25.90 8 71 1.1E-14 T 13-10-2018 Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 Gene3D G3DSA:3.40.228.10 154 257 3.6E-41 T 13-10-2018 Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 SUPERFAMILY SSF50692 769 924 6.56E-30 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 Pfam PF00384 Molybdopterin oxidoreductase 71 599 3.4E-30 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 Gene3D G3DSA:2.40.40.20 751 916 3.1E-25 T 13-10-2018 Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 SUPERFAMILY SSF53706 14 746 5.63E-137 T 13-10-2018 Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 63 3.8E-14 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 SMART SM00926 13 67 1.6E-17 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 Gene3D G3DSA:3.40.228.10 312 431 1.5E-10 T 13-10-2018 Atc_2359 00dbb0ed1285855a5552cde065ecf823 952 Pfam PF01568 Molydopterin dinucleotide binding domain 779 854 7.8E-10 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Atc_2060 20daa348a0c004ddb147840d226e555d 209 SMART SM00052 1 209 7.4E-4 T 13-10-2018 IPR001633 EAL domain Atc_2060 20daa348a0c004ddb147840d226e555d 209 SUPERFAMILY SSF141868 8 206 1.31E-20 T 13-10-2018 IPR035919 EAL domain superfamily Atc_2060 20daa348a0c004ddb147840d226e555d 209 Pfam PF00563 EAL domain 59 206 3.0E-18 T 13-10-2018 IPR001633 EAL domain Atc_2060 20daa348a0c004ddb147840d226e555d 209 Gene3D G3DSA:3.20.20.450 41 208 2.3E-19 T 13-10-2018 IPR035919 EAL domain superfamily Atc_1980 de22e972140019d9d99f3c0948db20d4 77 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 21 70 8.1E-12 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Atc_0116 3b3790ae1ad618a0164de706d702b1fe 196 Gene3D G3DSA:1.10.530.10 62 189 9.4E-28 T 13-10-2018 Atc_0116 3b3790ae1ad618a0164de706d702b1fe 196 SUPERFAMILY SSF53955 50 178 4.88E-29 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_0116 3b3790ae1ad618a0164de706d702b1fe 196 Pfam PF01464 Transglycosylase SLT domain 65 157 1.6E-17 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_0162 09e07626c5c635b476a34873c258080a 223 SUPERFAMILY SSF54427 82 221 2.72E-14 T 13-10-2018 IPR032710 NTF2-like domain superfamily Atc_0162 09e07626c5c635b476a34873c258080a 223 Pfam PF04335 VirB8 protein 10 220 2.9E-36 T 13-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 Atc_0904 ba41447370cdd2b03a7fd2aa962d63fb 318 Pfam PF01609 Transposase DDE domain 144 308 7.5E-25 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0904 ba41447370cdd2b03a7fd2aa962d63fb 318 Pfam PF05598 Transposase domain (DUF772) 52 127 9.3E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1600 ba41447370cdd2b03a7fd2aa962d63fb 318 Pfam PF01609 Transposase DDE domain 144 308 7.5E-25 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1600 ba41447370cdd2b03a7fd2aa962d63fb 318 Pfam PF05598 Transposase domain (DUF772) 52 127 9.3E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0807 4bbae42998194da0e4565cc2e30ef2ee 154 Gene3D G3DSA:3.90.79.10 3 152 1.1E-37 T 13-10-2018 Atc_0807 4bbae42998194da0e4565cc2e30ef2ee 154 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atc_0807 4bbae42998194da0e4565cc2e30ef2ee 154 Pfam PF00293 NUDIX domain 7 124 5.7E-14 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atc_0807 4bbae42998194da0e4565cc2e30ef2ee 154 SUPERFAMILY SSF55811 4 139 1.9E-26 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atc_0291 df47c0c595150289910770636f50ab3e 542 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 50 527 1.8E-122 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Atc_0291 df47c0c595150289910770636f50ab3e 542 SUPERFAMILY SSF103473 45 538 4.45E-66 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_0291 df47c0c595150289910770636f50ab3e 542 PRINTS PR01036 Tetracycline resistance protein TetB signature 440 459 1.8E-8 T 13-10-2018 Atc_0291 df47c0c595150289910770636f50ab3e 542 PRINTS PR01036 Tetracycline resistance protein TetB signature 175 199 1.8E-8 T 13-10-2018 Atc_0291 df47c0c595150289910770636f50ab3e 542 PRINTS PR01036 Tetracycline resistance protein TetB signature 54 78 1.8E-8 T 13-10-2018 Atc_0291 df47c0c595150289910770636f50ab3e 542 PRINTS PR01036 Tetracycline resistance protein TetB signature 341 365 1.8E-8 T 13-10-2018 Atc_0291 df47c0c595150289910770636f50ab3e 542 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 165 1.8E-8 T 13-10-2018 Atc_0291 df47c0c595150289910770636f50ab3e 542 Gene3D G3DSA:1.20.1250.20 295 470 2.9E-21 T 13-10-2018 Atc_0291 df47c0c595150289910770636f50ab3e 542 Pfam PF07690 Major Facilitator Superfamily 56 449 5.4E-55 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_0291 df47c0c595150289910770636f50ab3e 542 Gene3D G3DSA:1.20.1720.10 51 260 2.8E-50 T 13-10-2018 Atc_1616 6d540d096497d8066a942335c104f719 73 Gene3D G3DSA:1.10.10.10 1 73 5.0E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1616 6d540d096497d8066a942335c104f719 73 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.6E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_1616 6d540d096497d8066a942335c104f719 73 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.6E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_1616 6d540d096497d8066a942335c104f719 73 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.6E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_1616 6d540d096497d8066a942335c104f719 73 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 5.3E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_1616 6d540d096497d8066a942335c104f719 73 SUPERFAMILY SSF46785 3 70 3.33E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1452 aa95f65409590b4f2e13e9da71ddf802 109 SUPERFAMILY SSF110997 31 95 2.48E-10 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Atc_1452 aa95f65409590b4f2e13e9da71ddf802 109 Pfam PF05036 Sporulation related domain 30 91 2.4E-9 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Atc_1452 aa95f65409590b4f2e13e9da71ddf802 109 Gene3D G3DSA:3.30.70.1070 31 99 7.1E-7 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Atc_1819 f067a1e8e25006b7bd162348e3f85130 595 Pfam PF00589 Phage integrase family 397 535 1.3E-6 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_1819 f067a1e8e25006b7bd162348e3f85130 595 Gene3D G3DSA:1.10.443.10 388 538 4.8E-15 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_1819 f067a1e8e25006b7bd162348e3f85130 595 SUPERFAMILY SSF56349 252 535 2.41E-31 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_1819 f067a1e8e25006b7bd162348e3f85130 595 Gene3D G3DSA:1.10.150.130 250 353 1.3E-7 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_m100 0f840ea925d5661f5cac9385ed8bda67 691 Pfam PF00665 Integrase core domain 263 403 1.5E-13 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_m100 0f840ea925d5661f5cac9385ed8bda67 691 Gene3D G3DSA:3.30.420.10 258 455 2.0E-21 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_m100 0f840ea925d5661f5cac9385ed8bda67 691 SUPERFAMILY SSF53098 265 403 6.07E-11 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_2634 5979a1dda0d54f1675775e04e9b0eac2 228 Gene3D G3DSA:3.90.190.10 31 170 1.1E-24 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atc_2634 5979a1dda0d54f1675775e04e9b0eac2 228 Pfam PF13350 Tyrosine phosphatase family 59 145 3.2E-5 T 13-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type Atc_2634 5979a1dda0d54f1675775e04e9b0eac2 228 SUPERFAMILY SSF52799 34 168 2.99E-18 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atc_2345 e119cad5a4e38bcba5a6ea77e02be853 131 SUPERFAMILY SSF75169 12 131 1.13E-18 T 13-10-2018 IPR027396 DsrEFH-like Atc_2345 e119cad5a4e38bcba5a6ea77e02be853 131 Pfam PF02635 DsrE/DsrF-like family 12 131 2.2E-17 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_2345 e119cad5a4e38bcba5a6ea77e02be853 131 Gene3D G3DSA:3.40.1260.10 4 131 1.1E-31 T 13-10-2018 IPR027396 DsrEFH-like Atc_2343 b460b436626634552f8b16512b36f07b 373 SUPERFAMILY SSF102114 64 236 1.0E-15 T 13-10-2018 Atc_2343 b460b436626634552f8b16512b36f07b 373 Gene3D G3DSA:3.20.20.70 46 321 2.6E-6 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2343 b460b436626634552f8b16512b36f07b 373 Pfam PF04055 Radical SAM superfamily 74 216 4.7E-9 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_2343 b460b436626634552f8b16512b36f07b 373 SMART SM00729 65 269 0.0045 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atc_0337 d1c7828d992560755ef8071788da4549 314 SMART SM00244 21 179 4.9E-59 T 13-10-2018 IPR001107 Band 7 domain Atc_0337 d1c7828d992560755ef8071788da4549 314 SUPERFAMILY SSF117892 52 186 8.5E-39 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily Atc_0337 d1c7828d992560755ef8071788da4549 314 Gene3D G3DSA:3.30.479.30 49 181 3.1E-39 T 13-10-2018 Atc_0337 d1c7828d992560755ef8071788da4549 314 Pfam PF01145 SPFH domain / Band 7 family 25 195 1.3E-30 T 13-10-2018 IPR001107 Band 7 domain Atc_0337 d1c7828d992560755ef8071788da4549 314 PRINTS PR00721 Stomatin signature 28 50 1.8E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Atc_0337 d1c7828d992560755ef8071788da4549 314 PRINTS PR00721 Stomatin signature 76 97 1.8E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Atc_0337 d1c7828d992560755ef8071788da4549 314 PRINTS PR00721 Stomatin signature 174 195 1.8E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Atc_0337 d1c7828d992560755ef8071788da4549 314 PRINTS PR00721 Stomatin signature 111 128 1.8E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Atc_0337 d1c7828d992560755ef8071788da4549 314 PRINTS PR00721 Stomatin signature 155 173 1.8E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Atc_0337 d1c7828d992560755ef8071788da4549 314 PRINTS PR00721 Stomatin signature 131 154 1.8E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Atc_0337 d1c7828d992560755ef8071788da4549 314 Pfam PF16200 C-terminal region of band_7 246 303 6.8E-19 T 13-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 Atc_0968 95f57eac6de40554ab7c577c31b6cdde 317 Gene3D G3DSA:3.40.710.10 33 300 1.6E-74 T 13-10-2018 Atc_0968 95f57eac6de40554ab7c577c31b6cdde 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 82 93 1.2E-14 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_0968 95f57eac6de40554ab7c577c31b6cdde 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 152 1.2E-14 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_0968 95f57eac6de40554ab7c577c31b6cdde 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 162 175 1.2E-14 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_0968 95f57eac6de40554ab7c577c31b6cdde 317 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 53 274 1.4E-58 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Atc_0968 95f57eac6de40554ab7c577c31b6cdde 317 SUPERFAMILY SSF56601 28 299 2.49E-68 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_1p03 db2440e173d80b1b03ea4c601eccde4c 501 Pfam PF07282 Putative transposase DNA-binding domain 343 403 4.6E-8 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Atc_m084 fa103b95dd0e8fb04fcf2ac271d46450 405 SUPERFAMILY SSF56954 11 398 1.23E-60 T 13-10-2018 Atc_m084 fa103b95dd0e8fb04fcf2ac271d46450 405 Pfam PF02321 Outer membrane efflux protein 17 199 1.1E-8 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_m084 fa103b95dd0e8fb04fcf2ac271d46450 405 Pfam PF02321 Outer membrane efflux protein 223 394 7.8E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_m084 fa103b95dd0e8fb04fcf2ac271d46450 405 Gene3D G3DSA:1.20.1600.10 6 402 1.5E-57 T 13-10-2018 Atc_1694 f8f92c6e536475053c95bfc43d9c04db 216 Gene3D G3DSA:1.10.3890.10 8 216 1.3E-52 T 13-10-2018 IPR035932 HflD-like superfamily Atc_1694 f8f92c6e536475053c95bfc43d9c04db 216 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 6 212 27.106 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD Atc_1694 f8f92c6e536475053c95bfc43d9c04db 216 Pfam PF04356 Protein of unknown function (DUF489) 12 204 9.0E-54 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD Atc_1694 f8f92c6e536475053c95bfc43d9c04db 216 SUPERFAMILY SSF101322 10 213 3.66E-45 T 13-10-2018 IPR035932 HflD-like superfamily Atc_1694 f8f92c6e536475053c95bfc43d9c04db 216 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 15 165 1.0E-14 T 13-10-2018 Atc_0922 cdffe15b57e1a9520c6dfecca1ef39a5 220 Pfam PF02656 Domain of unknown function (DUF202) 104 179 3.9E-14 T 13-10-2018 IPR003807 Domain of unknown function DUF202 Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 Gene3D G3DSA:2.140.10.10 111 239 8.8E-10 T 13-10-2018 Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 Pfam PF13360 PQQ-like domain 212 317 1.3E-12 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 Pfam PF13360 PQQ-like domain 353 462 7.6E-8 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 SUPERFAMILY SSF50998 212 372 1.96E-31 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 Pfam PF01011 PQQ enzyme repeat 137 167 3.0E-6 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 SMART SM00564 173 230 100.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 SMART SM00564 384 416 130.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 SMART SM00564 280 312 21.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 SMART SM00564 239 270 0.56 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 SMART SM00564 429 460 690.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 SMART SM00564 132 163 35.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 SUPERFAMILY SSF50998 128 186 2.2E-7 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 Gene3D G3DSA:2.130.10.10 240 493 2.4E-37 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_1595 e9417b2cf806632f3dc38424ec1bb525 503 SUPERFAMILY SSF50998 353 493 1.43E-14 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Atc_0845 5797f005c4e8d31a01119dfc384ed407 251 Gene3D G3DSA:3.40.1180.10 2 238 4.3E-92 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Atc_0845 5797f005c4e8d31a01119dfc384ed407 251 SUPERFAMILY SSF64005 7 232 2.35E-85 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Atc_0845 5797f005c4e8d31a01119dfc384ed407 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 10 238 40.626 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Atc_0845 5797f005c4e8d31a01119dfc384ed407 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 10 237 1.2E-85 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Atc_0845 5797f005c4e8d31a01119dfc384ed407 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 183 200 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Atc_0845 5797f005c4e8d31a01119dfc384ed407 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 17 237 5.3E-80 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 Gene3D G3DSA:3.40.605.10 552 1015 2.6E-133 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 PIRSF PIRSF000197 531 1025 9.0E-183 T 13-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 PIRSF PIRSF000197 9 546 6.4E-136 T 13-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 64 166 9.2E-27 T 13-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 Gene3D G3DSA:3.40.309.10 769 982 2.6E-133 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 Pfam PF01619 Proline dehydrogenase 188 481 1.4E-78 T 13-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 SUPERFAMILY SSF53720 548 1017 5.11E-115 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 Pfam PF00171 Aldehyde dehydrogenase family 547 1013 3.1E-99 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 SUPERFAMILY SSF51730 169 494 3.92E-85 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 794 805 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 554 1011 6.9E-163 T 13-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 Gene3D G3DSA:3.20.20.220 111 512 1.3E-114 T 13-10-2018 Atc_0948 7bb9970b6a4d27ee80c25646b1a59be6 1034 SUPERFAMILY SSF81935 20 168 4.71E-33 T 13-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Atc_1977 3ffa79ffac0157b30bb9906c3aaf8161 154 Pfam PF01152 Bacterial-like globin 35 143 1.6E-11 T 13-10-2018 IPR001486 Truncated hemoglobin GO:0019825 Atc_1977 3ffa79ffac0157b30bb9906c3aaf8161 154 SUPERFAMILY SSF46458 33 148 3.62E-28 T 13-10-2018 IPR009050 Globin-like superfamily Atc_1977 3ffa79ffac0157b30bb9906c3aaf8161 154 Gene3D G3DSA:1.10.490.10 26 151 1.5E-34 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Atc_1987 ec93879b062e7519af235cfa2e508286 434 Pfam PF08706 D5 N terminal like 32 149 5.5E-8 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal Atc_1987 ec93879b062e7519af235cfa2e508286 434 Gene3D G3DSA:3.40.50.300 155 317 9.5E-12 T 13-10-2018 Atc_1987 ec93879b062e7519af235cfa2e508286 434 SUPERFAMILY SSF52540 177 325 1.37E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1987 ec93879b062e7519af235cfa2e508286 434 Pfam PF03288 Poxvirus D5 protein-like 353 405 1.1E-5 T 13-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal Atc_1987 ec93879b062e7519af235cfa2e508286 434 SMART SM00885 18 150 1.7E-4 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal Atc_1987 ec93879b062e7519af235cfa2e508286 434 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 99 401 9.4E-60 T 13-10-2018 IPR006500 DNA primase, phage/plasmid Atc_2449 590c1eb1ac4a5a7ac3144ce9065e9e8e 268 Pfam PF00149 Calcineurin-like phosphoesterase 15 97 7.2E-7 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atc_2449 590c1eb1ac4a5a7ac3144ce9065e9e8e 268 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 259 68.178 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Atc_2449 590c1eb1ac4a5a7ac3144ce9065e9e8e 268 SUPERFAMILY SSF56300 15 226 1.98E-19 T 13-10-2018 Atc_1970 108177f6a03fc2e5d55eafe2439baa75 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 3.9E-37 T 13-10-2018 IPR013527 YicC-like, N-terminal Atc_1970 108177f6a03fc2e5d55eafe2439baa75 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.9E-78 T 13-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Atc_1970 108177f6a03fc2e5d55eafe2439baa75 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.5E-33 T 13-10-2018 IPR013551 Domain of unknown function DUF1732 Atc_1505 4149ea81c72fed395ac98fe08a6be0a7 215 SUPERFAMILY SSF53639 51 188 1.53E-12 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Atc_1505 4149ea81c72fed395ac98fe08a6be0a7 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 52 175 4.5E-9 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal Atc_1505 4149ea81c72fed395ac98fe08a6be0a7 215 Gene3D G3DSA:3.40.225.10 41 212 4.9E-18 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Atc_0877 52ad9ec8948351febf4a619b193de4f0 446 Pfam PF13742 OB-fold nucleic acid binding domain 10 102 4.5E-27 T 13-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Atc_0877 52ad9ec8948351febf4a619b193de4f0 446 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 358 1.1E-129 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Atc_0877 52ad9ec8948351febf4a619b193de4f0 446 Pfam PF02601 Exonuclease VII, large subunit 126 437 1.5E-100 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Atc_0877 52ad9ec8948351febf4a619b193de4f0 446 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 441 28.496 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Atc_1012 590d9ff6e229dd3abc09cf1ad7e68ae4 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 7.5E-26 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_1012 590d9ff6e229dd3abc09cf1ad7e68ae4 61 SUPERFAMILY SSF57829 1 55 5.49E-23 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Atc_1012 590d9ff6e229dd3abc09cf1ad7e68ae4 61 Pfam PF01783 Ribosomal L32p protein family 2 56 6.0E-26 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_1012 590d9ff6e229dd3abc09cf1ad7e68ae4 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 21.21 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_m197 a9b258e2627f4dc5c7cd9b7bfd05bb46 357 Pfam PF01610 Transposase 295 343 4.9E-8 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_m197 a9b258e2627f4dc5c7cd9b7bfd05bb46 357 Pfam PF01610 Transposase 139 292 6.5E-27 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_m197 a9b258e2627f4dc5c7cd9b7bfd05bb46 357 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 59 96 2.6E-7 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_2244 85c15b5094ed6ca261215701daffd764 390 Pfam PF17186 Lipocalin-like domain 238 366 1.1E-39 T 13-10-2018 Atc_2244 85c15b5094ed6ca261215701daffd764 390 SUPERFAMILY SSF159245 44 366 2.35E-103 T 13-10-2018 Atc_2244 85c15b5094ed6ca261215701daffd764 390 Gene3D G3DSA:2.40.370.10 52 237 1.3E-64 T 13-10-2018 IPR023374 AttH-like domain superfamily Atc_2244 85c15b5094ed6ca261215701daffd764 390 Pfam PF07143 CrtC N-terminal lipocalin domain 65 233 4.3E-54 T 13-10-2018 IPR010791 AttH domain Atc_2244 85c15b5094ed6ca261215701daffd764 390 Gene3D G3DSA:2.40.370.10 239 372 1.8E-44 T 13-10-2018 IPR023374 AttH-like domain superfamily Atc_0139 08f5305e9bac5ba82c4188038d7e8bfd 200 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 189 34.955 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atc_0139 08f5305e9bac5ba82c4188038d7e8bfd 200 Pfam PF02669 K+-transporting ATPase, c chain 6 187 5.2E-71 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atc_0139 08f5305e9bac5ba82c4188038d7e8bfd 200 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 187 6.0E-73 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atc_0139 08f5305e9bac5ba82c4188038d7e8bfd 200 PIRSF PIRSF001296 1 193 2.9E-73 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atc_1398 b96a739fbf8c033066d0ac5b5b17d641 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 4 223 1.1E-55 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_1398 b96a739fbf8c033066d0ac5b5b17d641 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 1 229 37.721 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_1398 b96a739fbf8c033066d0ac5b5b17d641 245 Gene3D G3DSA:3.20.20.70 1 230 3.5E-82 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_1398 b96a739fbf8c033066d0ac5b5b17d641 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 55 68 - T 13-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_1398 b96a739fbf8c033066d0ac5b5b17d641 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 3 222 1.8E-50 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_1398 b96a739fbf8c033066d0ac5b5b17d641 245 SUPERFAMILY SSF51366 2 231 5.65E-70 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atc_1398 b96a739fbf8c033066d0ac5b5b17d641 245 SMART SM00934 3 224 1.2E-92 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atc_0534 aa515ff0a5a42a7d6a673482f485b345 169 Gene3D G3DSA:3.40.390.30 26 167 5.6E-37 T 13-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Atc_0534 aa515ff0a5a42a7d6a673482f485b345 169 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 53 158 1.6E-27 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Atc_0534 aa515ff0a5a42a7d6a673482f485b345 169 Pfam PF02130 Uncharacterized protein family UPF0054 50 156 3.2E-28 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Atc_0534 aa515ff0a5a42a7d6a673482f485b345 169 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 127 137 - T 13-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Atc_0534 aa515ff0a5a42a7d6a673482f485b345 169 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 161 18.899 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Atc_0534 aa515ff0a5a42a7d6a673482f485b345 169 SUPERFAMILY SSF55486 51 163 5.13E-35 T 13-10-2018 Atc_0437 6d850e40da980f7a2be0ff9a9ad7c49a 107 Gene3D G3DSA:1.10.10.10 1 65 5.6E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0437 6d850e40da980f7a2be0ff9a9ad7c49a 107 SUPERFAMILY SSF46689 10 98 1.67E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 SUPERFAMILY SSF141868 361 606 4.32E-77 T 13-10-2018 IPR035919 EAL domain superfamily Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 Gene3D G3DSA:3.20.20.450 344 607 4.0E-83 T 13-10-2018 IPR035919 EAL domain superfamily Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 SUPERFAMILY SSF55073 182 327 1.26E-8 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 Gene3D G3DSA:3.30.70.270 175 342 6.4E-14 T 13-10-2018 Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 Pfam PF00990 Diguanylate cyclase, GGDEF domain 176 316 5.8E-9 T 13-10-2018 IPR000160 GGDEF domain Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 SMART SM00267 161 336 3.3E-5 T 13-10-2018 IPR000160 GGDEF domain Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 SMART SM00052 346 599 1.9E-87 T 13-10-2018 IPR001633 EAL domain Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 SMART SM00448 19 134 6.6E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 Pfam PF00563 EAL domain 352 594 2.6E-61 T 13-10-2018 IPR001633 EAL domain Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 SUPERFAMILY SSF52172 18 168 1.08E-39 T 13-10-2018 IPR011006 CheY-like superfamily Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 Pfam PF00072 Response regulator receiver domain 21 134 2.1E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1718 8f55283a74b23fe4dd172aee01f09209 611 Gene3D G3DSA:3.40.50.2300 15 164 1.8E-37 T 13-10-2018 Atc_1916 c40edb5e6540eca499cc238654a5fe86 373 SUPERFAMILY SSF100879 248 349 1.94E-23 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atc_1916 c40edb5e6540eca499cc238654a5fe86 373 Gene3D G3DSA:3.30.70.270 14 174 1.1E-63 T 13-10-2018 Atc_1916 c40edb5e6540eca499cc238654a5fe86 373 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 351 3.1E-15 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atc_1916 c40edb5e6540eca499cc238654a5fe86 373 Gene3D G3DSA:2.30.40.20 31 83 1.1E-63 T 13-10-2018 Atc_1916 c40edb5e6540eca499cc238654a5fe86 373 Gene3D G3DSA:1.10.150.20 176 238 9.0E-19 T 13-10-2018 Atc_1916 c40edb5e6540eca499cc238654a5fe86 373 Hamap MF_01113 DNA polymerase IV [dinB]. 11 365 38.447 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Atc_1916 c40edb5e6540eca499cc238654a5fe86 373 Pfam PF00817 impB/mucB/samB family 17 164 5.7E-52 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atc_1916 c40edb5e6540eca499cc238654a5fe86 373 Gene3D G3DSA:3.30.1490.100 247 365 5.5E-23 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atc_1916 c40edb5e6540eca499cc238654a5fe86 373 SUPERFAMILY SSF56672 11 244 1.25E-89 T 13-10-2018 Atc_1916 c40edb5e6540eca499cc238654a5fe86 373 Pfam PF11798 IMS family HHH motif 176 207 5.9E-7 T 13-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Atc_2614 83e2844a612be5e5f4556393e4f5bc48 289 Pfam PF00696 Amino acid kinase family 28 264 5.6E-45 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Atc_2614 83e2844a612be5e5f4556393e4f5bc48 289 PRINTS PR00474 Glutamate 5-kinase family signature 58 72 1.3E-7 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_2614 83e2844a612be5e5f4556393e4f5bc48 289 PRINTS PR00474 Glutamate 5-kinase family signature 187 214 1.3E-7 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_2614 83e2844a612be5e5f4556393e4f5bc48 289 PRINTS PR00474 Glutamate 5-kinase family signature 237 257 1.3E-7 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atc_2614 83e2844a612be5e5f4556393e4f5bc48 289 Hamap MF_00082 Acetylglutamate kinase [argB]. 26 280 48.969 T 13-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atc_2614 83e2844a612be5e5f4556393e4f5bc48 289 SUPERFAMILY SSF53633 10 286 5.89E-93 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_2614 83e2844a612be5e5f4556393e4f5bc48 289 PIRSF PIRSF000728 12 287 1.6E-106 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atc_2614 83e2844a612be5e5f4556393e4f5bc48 289 Gene3D G3DSA:3.40.1160.10 4 288 1.3E-99 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atc_2614 83e2844a612be5e5f4556393e4f5bc48 289 TIGRFAM TIGR00761 argB: acetylglutamate kinase 28 262 1.3E-75 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atc_0714 5c5d19abdef18c81288ccebd44b86924 303 Pfam PF01925 Sulfite exporter TauE/SafE 18 285 4.1E-48 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Atc_1200 46804934b31534bef4471bce2ab8793e 366 SUPERFAMILY SSF56317 172 341 5.62E-12 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_1200 46804934b31534bef4471bce2ab8793e 366 Gene3D G3DSA:3.60.110.10 168 362 2.0E-6 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_2787 e6c3d15c5740b4fe692251f754970590 470 SUPERFAMILY SSF160246 2 59 4.45E-7 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Atc_2787 e6c3d15c5740b4fe692251f754970590 470 Pfam PF02656 Domain of unknown function (DUF202) 234 290 5.9E-5 T 13-10-2018 IPR003807 Domain of unknown function DUF202 Atc_2787 e6c3d15c5740b4fe692251f754970590 470 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 2 60 1.6E-8 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal Atc_2806 2b4161277e49202df40f3679ebbb849b 193 SUPERFAMILY SSF103088 81 186 1.18E-33 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_2806 2b4161277e49202df40f3679ebbb849b 193 PRINTS PR01021 OMPA domain signature 131 147 4.2E-14 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_2806 2b4161277e49202df40f3679ebbb849b 193 PRINTS PR01021 OMPA domain signature 86 108 4.2E-14 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_2806 2b4161277e49202df40f3679ebbb849b 193 PRINTS PR01021 OMPA domain signature 116 131 4.2E-14 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atc_2806 2b4161277e49202df40f3679ebbb849b 193 Pfam PF00691 OmpA family 86 180 1.4E-19 T 13-10-2018 IPR006665 OmpA-like domain Atc_2806 2b4161277e49202df40f3679ebbb849b 193 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 4 186 29.397 T 13-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 Atc_2806 2b4161277e49202df40f3679ebbb849b 193 ProSitePatterns PS01068 OmpA-like domain. 118 162 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Atc_2806 2b4161277e49202df40f3679ebbb849b 193 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 83 186 1.4E-42 T 13-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 Atc_2806 2b4161277e49202df40f3679ebbb849b 193 Gene3D G3DSA:3.30.1330.60 66 186 4.6E-37 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_2375 17694144f00ca7430cb470036c9c8004 346 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 1 345 25.91 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2375 17694144f00ca7430cb470036c9c8004 346 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 4 341 6.8E-125 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2375 17694144f00ca7430cb470036c9c8004 346 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 300 324 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2375 17694144f00ca7430cb470036c9c8004 346 Pfam PF01098 Cell cycle protein 5 341 1.5E-101 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_1688 74dbc4d292ba0ccd4094e477f95f230a 282 Gene3D G3DSA:3.40.50.620 80 213 5.5E-75 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_1688 74dbc4d292ba0ccd4094e477f95f230a 282 Gene3D G3DSA:3.40.50.620 6 270 5.5E-75 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_1688 74dbc4d292ba0ccd4094e477f95f230a 282 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 157 229 6.3E-8 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Atc_1688 74dbc4d292ba0ccd4094e477f95f230a 282 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 112 3.9E-23 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Atc_1688 74dbc4d292ba0ccd4094e477f95f230a 282 PRINTS PR00987 Glutamyl-tRNA synthetase signature 181 189 8.3E-12 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_1688 74dbc4d292ba0ccd4094e477f95f230a 282 PRINTS PR00987 Glutamyl-tRNA synthetase signature 165 175 8.3E-12 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_1688 74dbc4d292ba0ccd4094e477f95f230a 282 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 8.3E-12 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_1688 74dbc4d292ba0ccd4094e477f95f230a 282 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 8.3E-12 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_1688 74dbc4d292ba0ccd4094e477f95f230a 282 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 8.3E-12 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atc_1688 74dbc4d292ba0ccd4094e477f95f230a 282 SUPERFAMILY SSF52374 5 257 4.29E-66 T 13-10-2018 Atc_1350 04ea364493b360afb01fe23721ff7dd5 260 SMART SM00862 180 255 7.8E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_1350 04ea364493b360afb01fe23721ff7dd5 260 Pfam PF00486 Transcriptional regulatory protein, C terminal 181 255 2.8E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_1350 04ea364493b360afb01fe23721ff7dd5 260 SUPERFAMILY SSF46894 165 257 4.25E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atc_1350 04ea364493b360afb01fe23721ff7dd5 260 Gene3D G3DSA:1.10.10.10 159 257 6.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1040 d69bceb2348feed398af22f2ef16ba47 790 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 4 767 4.2E-238 T 13-10-2018 IPR018752 Uncharacterised protein family UPF0753 Atc_1040 d69bceb2348feed398af22f2ef16ba47 790 Hamap MF_01871 UPF0753 protein . 1 782 21.343 T 13-10-2018 IPR018752 Uncharacterised protein family UPF0753 Atc_1828 f5113b029c070e8e74bcb8bf3f70f29b 281 Pfam PF00793 DAHP synthetase I family 9 268 1.9E-68 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Atc_1828 f5113b029c070e8e74bcb8bf3f70f29b 281 Gene3D G3DSA:3.20.20.70 3 272 2.8E-104 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_1828 f5113b029c070e8e74bcb8bf3f70f29b 281 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 268 7.6E-126 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Atc_1828 f5113b029c070e8e74bcb8bf3f70f29b 281 SUPERFAMILY SSF51569 2 269 2.11E-107 T 13-10-2018 Atc_1828 f5113b029c070e8e74bcb8bf3f70f29b 281 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 53.021 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Atc_1968 b2eaf1d5cee0b9295346c0cdf2988030 91 SMART SM01409 8 60 8.7E-16 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Atc_1968 b2eaf1d5cee0b9295346c0cdf2988030 91 Gene3D G3DSA:3.90.940.10 1 82 1.7E-22 T 13-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Atc_1968 b2eaf1d5cee0b9295346c0cdf2988030 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.4 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_1968 b2eaf1d5cee0b9295346c0cdf2988030 91 SUPERFAMILY SSF63562 1 66 2.35E-22 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Atc_1968 b2eaf1d5cee0b9295346c0cdf2988030 91 Pfam PF01192 RNA polymerase Rpb6 8 58 1.3E-14 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Atc_1968 b2eaf1d5cee0b9295346c0cdf2988030 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 3.3E-19 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atc_2234 d0770f21479b91ae997b41e917fbd07e 880 TIGRFAM TIGR03480 HpnN: hopanoid biosynthesis associated RND transporter like protein HpnN 1 862 1.3E-301 T 13-10-2018 IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN Atc_2234 d0770f21479b91ae997b41e917fbd07e 880 Gene3D G3DSA:1.20.1640.10 681 878 2.0E-8 T 13-10-2018 Atc_2234 d0770f21479b91ae997b41e917fbd07e 880 Gene3D G3DSA:1.20.1640.10 240 422 4.2E-9 T 13-10-2018 Atc_2234 d0770f21479b91ae997b41e917fbd07e 880 SUPERFAMILY SSF82866 692 865 1.57E-25 T 13-10-2018 Atc_2234 d0770f21479b91ae997b41e917fbd07e 880 Pfam PF03176 MMPL family 219 413 4.5E-21 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Atc_2234 d0770f21479b91ae997b41e917fbd07e 880 Pfam PF03176 MMPL family 721 868 4.3E-6 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Atc_2234 d0770f21479b91ae997b41e917fbd07e 880 SUPERFAMILY SSF82866 216 414 5.1E-27 T 13-10-2018 Atc_0341 6adf62f75be8f14c0c7023dabf99bfcf 497 SUPERFAMILY SSF103473 29 490 1.83E-64 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_0341 6adf62f75be8f14c0c7023dabf99bfcf 497 Gene3D G3DSA:1.10.286.90 223 263 2.0E-5 T 13-10-2018 Atc_0341 6adf62f75be8f14c0c7023dabf99bfcf 497 ProSitePatterns PS00217 Sugar transport proteins signature 2. 139 164 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atc_0341 6adf62f75be8f14c0c7023dabf99bfcf 497 Pfam PF00083 Sugar (and other) transporter 85 490 2.4E-45 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atc_1622 8e9c58bacd0d5c4b5c7da344938f90f1 88 SUPERFAMILY SSF53098 1 48 3.79E-5 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1622 8e9c58bacd0d5c4b5c7da344938f90f1 88 Pfam PF13683 Integrase core domain 2 42 1.4E-9 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_2272 66f3620aec144dbf9437184a4b2deda6 346 SUPERFAMILY SSF51735 3 291 9.61E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2272 66f3620aec144dbf9437184a4b2deda6 346 Pfam PF13460 NAD(P)H-binding 9 151 1.4E-15 T 13-10-2018 IPR016040 NAD(P)-binding domain Atc_2272 66f3620aec144dbf9437184a4b2deda6 346 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 167 233 1.0E-4 T 13-10-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 Atc_2272 66f3620aec144dbf9437184a4b2deda6 346 Gene3D G3DSA:3.40.50.720 3 289 1.7E-47 T 13-10-2018 Atc_2342 677594fd4d35923031387978663e7918 365 SUPERFAMILY SSF55681 9 235 5.97E-57 T 13-10-2018 Atc_2342 677594fd4d35923031387978663e7918 365 Gene3D G3DSA:3.30.930.10 10 261 1.2E-51 T 13-10-2018 Atc_2342 677594fd4d35923031387978663e7918 365 Gene3D G3DSA:3.30.390.50 265 355 1.2E-15 T 13-10-2018 Atc_1956 e5645e12fe5ea84b1f01c8d0d35519fb 250 Gene3D G3DSA:3.40.1280.10 80 241 1.8E-56 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atc_1956 e5645e12fe5ea84b1f01c8d0d35519fb 250 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 73 2.2E-12 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Atc_1956 e5645e12fe5ea84b1f01c8d0d35519fb 250 SUPERFAMILY SSF75217 86 242 2.09E-47 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Atc_1956 e5645e12fe5ea84b1f01c8d0d35519fb 250 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 240 3.6E-64 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Atc_1956 e5645e12fe5ea84b1f01c8d0d35519fb 250 Gene3D G3DSA:3.30.1330.30 1 75 2.0E-11 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Atc_1956 e5645e12fe5ea84b1f01c8d0d35519fb 250 Pfam PF00588 SpoU rRNA Methylase family 94 233 3.2E-37 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Atc_1956 e5645e12fe5ea84b1f01c8d0d35519fb 250 SUPERFAMILY SSF55315 4 73 4.24E-10 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Atc_1956 e5645e12fe5ea84b1f01c8d0d35519fb 250 SMART SM00967 5 80 2.3E-11 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Atc_2850 97c65c6b52919324c38d4b65c2117f7a 253 SUPERFAMILY SSF56219 1 253 4.06E-73 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atc_2850 97c65c6b52919324c38d4b65c2117f7a 253 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 6.8E-85 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Atc_2850 97c65c6b52919324c38d4b65c2117f7a 253 Gene3D G3DSA:3.60.10.10 1 253 1.3E-85 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atc_2850 97c65c6b52919324c38d4b65c2117f7a 253 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 188 203 - T 13-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 Atc_2850 97c65c6b52919324c38d4b65c2117f7a 253 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 252 8.6E-80 T 13-10-2018 Atc_2850 97c65c6b52919324c38d4b65c2117f7a 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 236 2.5E-17 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 SUPERFAMILY SSF51735 3 188 4.48E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 85 113 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 4 185 6.9E-40 T 13-10-2018 Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 Gene3D G3DSA:3.40.50.720 1 189 9.9E-48 T 13-10-2018 Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 88 5.9E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 171 5.9E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 26 37 5.9E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 98 117 5.9E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 135 5.9E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 86 2.3E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 26 37 2.3E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2772 8c04ad9de7321f0c49fcf37e8998b095 189 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 117 2.3E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1545 b321a7beca318a02728e519c7e0f147d 235 PRINTS PR01837 MgtC/SapB protein signature 64 86 8.0E-42 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atc_1545 b321a7beca318a02728e519c7e0f147d 235 PRINTS PR01837 MgtC/SapB protein signature 19 38 8.0E-42 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atc_1545 b321a7beca318a02728e519c7e0f147d 235 PRINTS PR01837 MgtC/SapB protein signature 38 56 8.0E-42 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atc_1545 b321a7beca318a02728e519c7e0f147d 235 PRINTS PR01837 MgtC/SapB protein signature 91 115 8.0E-42 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atc_1545 b321a7beca318a02728e519c7e0f147d 235 Pfam PF02308 MgtC family 16 137 1.6E-37 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atc_3p13 9a4d9a473254aef23530e4a125d8e6c9 111 Pfam PF06412 Conjugal transfer protein TraD 40 95 8.6E-12 T 13-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 Atc_1529 004e16812979f53a5eb7c3451479ec7c 843 Gene3D G3DSA:3.40.50.2000 115 182 1.9E-8 T 13-10-2018 Atc_1529 004e16812979f53a5eb7c3451479ec7c 843 Pfam PF00343 Carbohydrate phosphorylase 272 621 5.0E-19 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Atc_1529 004e16812979f53a5eb7c3451479ec7c 843 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 108 711 1.0E-237 T 13-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Atc_1529 004e16812979f53a5eb7c3451479ec7c 843 SUPERFAMILY SSF53756 15 717 1.69E-190 T 13-10-2018 Atc_1529 004e16812979f53a5eb7c3451479ec7c 843 Gene3D G3DSA:3.40.50.2000 423 663 7.5E-35 T 13-10-2018 Atc_1529 004e16812979f53a5eb7c3451479ec7c 843 Gene3D G3DSA:3.40.50.2000 267 422 5.9E-15 T 13-10-2018 Atc_1529 004e16812979f53a5eb7c3451479ec7c 843 PIRSF PIRSF000460 3 786 1.3E-241 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Atc_1529 004e16812979f53a5eb7c3451479ec7c 843 Pfam PF11897 Protein of unknown function (DUF3417) 14 121 1.2E-29 T 13-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Atc_1280 c88ce712c875cb5610565fee0c673acc 306 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 7 200 6.7E-23 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Atc_1280 c88ce712c875cb5610565fee0c673acc 306 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 7 23 1.0E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Atc_1280 c88ce712c875cb5610565fee0c673acc 306 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 51 64 1.0E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Atc_1280 c88ce712c875cb5610565fee0c673acc 306 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 180 192 1.0E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Atc_1280 c88ce712c875cb5610565fee0c673acc 306 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.0E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Atc_1280 c88ce712c875cb5610565fee0c673acc 306 Gene3D G3DSA:3.40.50.150 5 241 3.8E-34 T 13-10-2018 Atc_1280 c88ce712c875cb5610565fee0c673acc 306 PIRSF PIRSF000398 1 282 4.7E-42 T 13-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 Atc_1280 c88ce712c875cb5610565fee0c673acc 306 SUPERFAMILY SSF53335 2 265 9.02E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1280 c88ce712c875cb5610565fee0c673acc 306 Gene3D G3DSA:1.10.1020.10 58 160 3.8E-34 T 13-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 Atc_1506 237b7724f3dea1108d9b40c8f52bc1bc 129 SUPERFAMILY SSF160443 15 69 4.32E-8 T 13-10-2018 IPR036063 Smr domain superfamily Atc_1506 237b7724f3dea1108d9b40c8f52bc1bc 129 SMART SM00463 14 91 0.0024 T 13-10-2018 IPR002625 Smr domain Atc_1506 237b7724f3dea1108d9b40c8f52bc1bc 129 Pfam PF01713 Smr domain 17 90 1.6E-13 T 13-10-2018 IPR002625 Smr domain Atc_1506 237b7724f3dea1108d9b40c8f52bc1bc 129 Gene3D G3DSA:3.30.1370.110 8 91 6.7E-16 T 13-10-2018 Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 Gene3D G3DSA:3.10.50.40 156 252 2.6E-77 T 13-10-2018 Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 SUPERFAMILY SSF109998 254 424 4.97E-36 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 SUPERFAMILY SSF54534 140 253 1.34E-25 T 13-10-2018 Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 SUPERFAMILY SSF102735 15 124 3.27E-29 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 Gene3D G3DSA:3.30.70.1050 6 119 3.1E-32 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 Pfam PF05697 Bacterial trigger factor protein (TF) 16 148 1.6E-31 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 269 409 2.1E-23 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 Gene3D G3DSA:1.10.3120.10 131 413 2.6E-77 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 TIGRFAM TIGR00115 tig: trigger factor 18 408 1.4E-115 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 PIRSF PIRSF003095 8 428 6.2E-103 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 163 243 2.7E-10 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Atc_1400 d7b7396ce0c9cf00feda85af2f674bf7 435 Hamap MF_00303 Trigger factor [tig]. 8 414 19.072 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Atc_m167 68b88861cb045480aff34839c44a4e8c 137 Pfam PF01850 PIN domain 3 128 1.1E-10 T 13-10-2018 IPR002716 PIN domain Atc_m167 68b88861cb045480aff34839c44a4e8c 137 SUPERFAMILY SSF88723 1 128 3.6E-15 T 13-10-2018 IPR029060 PIN-like domain superfamily Atc_m167 68b88861cb045480aff34839c44a4e8c 137 Gene3D G3DSA:3.40.50.1010 1 131 2.7E-8 T 13-10-2018 Atc_0419 af27cf8de384eb3cebc24b3b33c9251e 329 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 212 323 9.1E-10 T 13-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_0419 af27cf8de384eb3cebc24b3b33c9251e 329 SUPERFAMILY SSF52540 7 206 1.01E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0419 af27cf8de384eb3cebc24b3b33c9251e 329 Gene3D G3DSA:1.20.272.10 211 328 5.8E-27 T 13-10-2018 Atc_0419 af27cf8de384eb3cebc24b3b33c9251e 329 SUPERFAMILY SSF48019 209 325 2.21E-24 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Atc_0419 af27cf8de384eb3cebc24b3b33c9251e 329 Gene3D G3DSA:3.40.50.300 1 136 7.0E-25 T 13-10-2018 Atc_0419 af27cf8de384eb3cebc24b3b33c9251e 329 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 325 7.9E-60 T 13-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Atc_0419 af27cf8de384eb3cebc24b3b33c9251e 329 Gene3D G3DSA:1.10.8.60 142 210 7.9E-15 T 13-10-2018 Atc_0419 af27cf8de384eb3cebc24b3b33c9251e 329 Pfam PF06144 DNA polymerase III, delta subunit 44 186 1.0E-16 T 13-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Atc_1205 032e24b3b747e0693129010867bea697 364 SUPERFAMILY SSF52540 1 250 1.03E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1205 032e24b3b747e0693129010867bea697 364 Gene3D G3DSA:3.40.50.300 1 253 2.8E-42 T 13-10-2018 Atc_1205 032e24b3b747e0693129010867bea697 364 Pfam PF13614 AAA domain 3 163 2.8E-25 T 13-10-2018 IPR025669 AAA domain Atc_1157 c749fe20debee1a1093ffc2b668c459e 268 SUPERFAMILY SSF56300 11 259 8.75E-24 T 13-10-2018 Atc_1157 c749fe20debee1a1093ffc2b668c459e 268 Pfam PF00149 Calcineurin-like phosphoesterase 11 235 4.5E-10 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atc_0736 bbf20f4154946e1f10b1682d2332f4c6 116 SUPERFAMILY SSF75169 1 116 1.3E-8 T 13-10-2018 IPR027396 DsrEFH-like Atc_0736 bbf20f4154946e1f10b1682d2332f4c6 116 Pfam PF02635 DsrE/DsrF-like family 5 115 1.4E-4 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_0736 bbf20f4154946e1f10b1682d2332f4c6 116 Gene3D G3DSA:3.40.1260.10 2 116 4.4E-11 T 13-10-2018 IPR027396 DsrEFH-like Atc_0292 ad9ea3cff3146d2c2047f6274becfcc1 320 SUPERFAMILY SSF103481 60 156 6.41E-5 T 13-10-2018 Atc_0292 ad9ea3cff3146d2c2047f6274becfcc1 320 SUPERFAMILY SSF103481 231 315 7.72E-9 T 13-10-2018 Atc_0292 ad9ea3cff3146d2c2047f6274becfcc1 320 Pfam PF00892 EamA-like transporter family 175 312 9.1E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atc_2560 c9cdaa3d529deb463e858995f8df0df8 153 Gene3D G3DSA:1.10.1660.10 19 94 1.0E-19 T 13-10-2018 Atc_2560 c9cdaa3d529deb463e858995f8df0df8 153 Pfam PF13411 MerR HTH family regulatory protein 25 94 4.8E-22 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_2560 c9cdaa3d529deb463e858995f8df0df8 153 SUPERFAMILY SSF46955 25 100 1.42E-15 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Atc_2560 c9cdaa3d529deb463e858995f8df0df8 153 SMART SM00422 25 95 4.2E-4 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atc_1581 8ad01c586e55c2fb3d8467a54d57df3c 386 Gene3D G3DSA:1.50.10.150 14 362 1.3E-20 T 13-10-2018 IPR038665 Voltage-dependent anion channel superfamily Atc_1581 8ad01c586e55c2fb3d8467a54d57df3c 386 Pfam PF03595 Voltage-dependent anion channel 18 349 5.8E-81 T 13-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 Atc_3p26 ebd6d8d9f78c108030a9b6cc6b2e8895 210 Gene3D G3DSA:3.40.50.300 3 210 1.3E-40 T 13-10-2018 Atc_3p26 ebd6d8d9f78c108030a9b6cc6b2e8895 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 184 2.0E-14 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_3p26 ebd6d8d9f78c108030a9b6cc6b2e8895 210 SUPERFAMILY SSF52540 5 208 4.91E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_3p26 ebd6d8d9f78c108030a9b6cc6b2e8895 210 PIRSF PIRSF009320 1 210 6.4E-32 T 13-10-2018 Atc_2566 f734465656287df04cad2e71096cde9d 283 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 63 223 2.1E-7 T 13-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF Atc_2566 f734465656287df04cad2e71096cde9d 283 Gene3D G3DSA:1.10.620.20 7 230 1.6E-10 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Atc_2566 f734465656287df04cad2e71096cde9d 283 SUPERFAMILY SSF47240 6 271 1.43E-42 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_1455 dc23cb328e7eba770dd994fc04c113bb 163 SUPERFAMILY SSF141457 5 124 6.28E-18 T 13-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Atc_1455 dc23cb328e7eba770dd994fc04c113bb 163 Gene3D G3DSA:2.30.290.10 3 129 5.5E-17 T 13-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Atc_1455 dc23cb328e7eba770dd994fc04c113bb 163 Pfam PF02623 FliW protein 25 125 9.1E-16 T 13-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Atc_m092 5e7bf7fb4615516672b8cba76930da42 194 SUPERFAMILY SSF159594 46 193 1.7E-21 T 13-10-2018 Atc_m092 5e7bf7fb4615516672b8cba76930da42 194 Gene3D G3DSA:3.40.50.10610 16 194 8.1E-7 T 13-10-2018 Atc_m092 5e7bf7fb4615516672b8cba76930da42 194 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 49 190 1.3E-24 T 13-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component Atc_2615 808e04c4f2042a3e9e3b14a310619c4f 211 SUPERFAMILY SSF46689 13 88 1.65E-22 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_2615 808e04c4f2042a3e9e3b14a310619c4f 211 SUPERFAMILY SSF48498 89 203 6.33E-15 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atc_2615 808e04c4f2042a3e9e3b14a310619c4f 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Atc_2615 808e04c4f2042a3e9e3b14a310619c4f 211 Gene3D G3DSA:1.10.357.10 68 208 3.7E-23 T 13-10-2018 Atc_2615 808e04c4f2042a3e9e3b14a310619c4f 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.8E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atc_2615 808e04c4f2042a3e9e3b14a310619c4f 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.8E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atc_2615 808e04c4f2042a3e9e3b14a310619c4f 211 Gene3D G3DSA:1.10.10.60 14 63 7.0E-23 T 13-10-2018 Atc_2615 808e04c4f2042a3e9e3b14a310619c4f 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 3.2E-21 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atc_1975 c3491baaba130153633f307006aef369 386 SMART SM00267 186 356 9.9E-56 T 13-10-2018 IPR000160 GGDEF domain Atc_1975 c3491baaba130153633f307006aef369 386 Pfam PF01590 GAF domain 89 174 5.4E-8 T 13-10-2018 IPR003018 GAF domain GO:0005515 Atc_1975 c3491baaba130153633f307006aef369 386 Gene3D G3DSA:3.30.70.270 195 357 7.0E-50 T 13-10-2018 Atc_1975 c3491baaba130153633f307006aef369 386 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 194 349 2.5E-40 T 13-10-2018 IPR000160 GGDEF domain Atc_1975 c3491baaba130153633f307006aef369 386 Pfam PF00990 Diguanylate cyclase, GGDEF domain 197 350 4.6E-42 T 13-10-2018 IPR000160 GGDEF domain Atc_1975 c3491baaba130153633f307006aef369 386 SUPERFAMILY SSF55073 202 353 2.59E-41 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_1975 c3491baaba130153633f307006aef369 386 Gene3D G3DSA:3.30.450.40 23 194 2.8E-9 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_1975 c3491baaba130153633f307006aef369 386 SUPERFAMILY SSF55781 49 189 7.01E-11 T 13-10-2018 Atc_0690 eba94fbc05990774b836eea8d6243918 186 SUPERFAMILY SSF55821 4 185 6.1E-42 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Atc_0690 eba94fbc05990774b836eea8d6243918 186 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 8 185 31.858 T 13-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 Atc_0690 eba94fbc05990774b836eea8d6243918 186 Gene3D G3DSA:3.90.870.10 4 185 2.1E-48 T 13-10-2018 Atc_0690 eba94fbc05990774b836eea8d6243918 186 Pfam PF01300 Telomere recombination 17 185 4.9E-32 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Atc_1366 1470ad49cbee30105b212cf7f8a874b1 370 SUPERFAMILY SSF102114 111 329 1.83E-16 T 13-10-2018 Atc_1366 1470ad49cbee30105b212cf7f8a874b1 370 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 14 353 73.95 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Atc_1366 1470ad49cbee30105b212cf7f8a874b1 370 Gene3D G3DSA:1.10.150.530 15 73 9.8E-20 T 13-10-2018 Atc_1366 1470ad49cbee30105b212cf7f8a874b1 370 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 15 351 1.0E-125 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Atc_1366 1470ad49cbee30105b212cf7f8a874b1 370 PIRSF PIRSF006004 9 360 1.6E-138 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Atc_1366 1470ad49cbee30105b212cf7f8a874b1 370 Pfam PF04055 Radical SAM superfamily 118 281 3.5E-15 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_1366 1470ad49cbee30105b212cf7f8a874b1 370 Gene3D G3DSA:3.20.20.70 76 338 1.9E-104 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2603 3688b5368c004e12ac4d3053715fd6f9 211 Pfam PF00535 Glycosyl transferase family 2 59 194 7.0E-18 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atc_2603 3688b5368c004e12ac4d3053715fd6f9 211 SUPERFAMILY SSF53448 46 203 3.3E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2603 3688b5368c004e12ac4d3053715fd6f9 211 Gene3D G3DSA:3.90.550.10 38 201 2.2E-26 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2241 359bc267c8cca0519cb9baca56975116 366 Gene3D G3DSA:1.10.600.10 27 353 3.3E-97 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atc_2241 359bc267c8cca0519cb9baca56975116 366 Pfam PF00494 Squalene/phytoene synthase 36 326 1.5E-54 T 13-10-2018 Atc_2241 359bc267c8cca0519cb9baca56975116 366 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 175 190 - T 13-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Atc_2241 359bc267c8cca0519cb9baca56975116 366 SUPERFAMILY SSF48576 28 341 5.47E-56 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atc_2633 06c8c7d827ad6a12f07c6116734d5a2c 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 9 383 2.5E-149 T 13-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 Atc_2633 06c8c7d827ad6a12f07c6116734d5a2c 390 Pfam PF00155 Aminotransferase class I and II 45 378 4.3E-25 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atc_2633 06c8c7d827ad6a12f07c6116734d5a2c 390 SUPERFAMILY SSF53383 8 383 1.77E-81 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_2633 06c8c7d827ad6a12f07c6116734d5a2c 390 Gene3D G3DSA:3.40.640.10 64 281 1.8E-113 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_2633 06c8c7d827ad6a12f07c6116734d5a2c 390 Gene3D G3DSA:3.90.1150.10 22 378 1.8E-113 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_3p bd89bc3af13d8efc5318a8657bb105eb 831 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 473 479 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_3p bd89bc3af13d8efc5318a8657bb105eb 831 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 470 482 1.2E-22 T 13-10-2018 Atc_3p bd89bc3af13d8efc5318a8657bb105eb 831 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 318 334 1.2E-22 T 13-10-2018 Atc_3p bd89bc3af13d8efc5318a8657bb105eb 831 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 342 356 1.2E-22 T 13-10-2018 Atc_3p bd89bc3af13d8efc5318a8657bb105eb 831 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 547 571 1.2E-22 T 13-10-2018 Atc_3p bd89bc3af13d8efc5318a8657bb105eb 831 Pfam PF02384 N-6 DNA Methylase 425 482 6.6E-7 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Atc_3p bd89bc3af13d8efc5318a8657bb105eb 831 Pfam PF02384 N-6 DNA Methylase 546 624 3.4E-5 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Atc_3p bd89bc3af13d8efc5318a8657bb105eb 831 Pfam PF02384 N-6 DNA Methylase 299 373 7.7E-15 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Atc_3p bd89bc3af13d8efc5318a8657bb105eb 831 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 44 160 1.1E-30 T 13-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain Atc_3p bd89bc3af13d8efc5318a8657bb105eb 831 SUPERFAMILY SSF53335 185 625 2.57E-74 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0013 21e8c5422fd3a48701a068f7dcab7be9 168 PRINTS PR01576 Peptide deformylase signature 89 100 1.5E-38 T 13-10-2018 IPR023635 Peptide deformylase Atc_0013 21e8c5422fd3a48701a068f7dcab7be9 168 PRINTS PR01576 Peptide deformylase signature 33 62 1.5E-38 T 13-10-2018 IPR023635 Peptide deformylase Atc_0013 21e8c5422fd3a48701a068f7dcab7be9 168 PRINTS PR01576 Peptide deformylase signature 101 119 1.5E-38 T 13-10-2018 IPR023635 Peptide deformylase Atc_0013 21e8c5422fd3a48701a068f7dcab7be9 168 PRINTS PR01576 Peptide deformylase signature 120 149 1.5E-38 T 13-10-2018 IPR023635 Peptide deformylase Atc_0013 21e8c5422fd3a48701a068f7dcab7be9 168 Pfam PF01327 Polypeptide deformylase 4 152 7.1E-51 T 13-10-2018 IPR023635 Peptide deformylase Atc_0013 21e8c5422fd3a48701a068f7dcab7be9 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.952 T 13-10-2018 IPR023635 Peptide deformylase Atc_0013 21e8c5422fd3a48701a068f7dcab7be9 168 PIRSF PIRSF004749 1 167 6.9E-54 T 13-10-2018 IPR023635 Peptide deformylase Atc_0013 21e8c5422fd3a48701a068f7dcab7be9 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 5.7E-55 T 13-10-2018 IPR023635 Peptide deformylase Atc_0013 21e8c5422fd3a48701a068f7dcab7be9 168 SUPERFAMILY SSF56420 3 163 2.62E-58 T 13-10-2018 IPR036821 Peptide deformylase superfamily Atc_0013 21e8c5422fd3a48701a068f7dcab7be9 168 Gene3D G3DSA:3.90.45.10 1 165 1.4E-60 T 13-10-2018 IPR036821 Peptide deformylase superfamily Atc_0068 5277968d6b01c0c02d21c8d7ccb73ee9 246 PIRSF PIRSF015601 1 243 2.0E-39 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Atc_0068 5277968d6b01c0c02d21c8d7ccb73ee9 246 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 19 244 4.1E-38 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Atc_0068 5277968d6b01c0c02d21c8d7ccb73ee9 246 Gene3D G3DSA:3.40.1280.10 4 241 3.4E-58 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atc_0068 5277968d6b01c0c02d21c8d7ccb73ee9 246 SUPERFAMILY SSF75217 76 244 1.09E-41 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Atc_0068 5277968d6b01c0c02d21c8d7ccb73ee9 246 SUPERFAMILY SSF88697 6 67 3.48E-9 T 13-10-2018 IPR015947 PUA-like superfamily Atc_0068 5277968d6b01c0c02d21c8d7ccb73ee9 246 Pfam PF04452 RNA methyltransferase 25 238 3.1E-51 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Atc_2236 e0360d7de1fb17be6ea94eea230a2458 475 Gene3D G3DSA:3.80.30.20 197 403 8.9E-28 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Atc_2236 e0360d7de1fb17be6ea94eea230a2458 475 SUPERFAMILY SSF102114 173 426 2.49E-49 T 13-10-2018 Atc_2236 e0360d7de1fb17be6ea94eea230a2458 475 Pfam PF04055 Radical SAM superfamily 204 363 8.0E-20 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_2236 e0360d7de1fb17be6ea94eea230a2458 475 SMART SM00729 198 406 1.2E-31 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atc_2236 e0360d7de1fb17be6ea94eea230a2458 475 TIGRFAM TIGR03471 HpnJ: hopanoid biosynthesis associated radical SAM protein HpnJ 3 474 3.0E-260 T 13-10-2018 IPR017834 Hopanoid biosynthesis associated radical SAM protein HpnJ Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 SUPERFAMILY SSF55486 211 456 1.34E-74 T 13-10-2018 Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 Gene3D G3DSA:1.25.50.10 559 875 2.7E-100 T 13-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 562 874 3.4E-102 T 13-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 Gene3D G3DSA:1.10.390.10 287 450 1.7E-61 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 Gene3D G3DSA:2.60.40.1730 19 201 4.6E-61 T 13-10-2018 Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 Pfam PF01433 Peptidase family M1 domain 215 446 1.7E-56 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 16 873 0.0 T 13-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 Gene3D G3DSA:1.10.1740.60 203 286 2.9E-36 T 13-10-2018 Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 265 275 2.2E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 2.2E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 316 2.2E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 133 148 2.2E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 320 332 2.2E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 SUPERFAMILY SSF63737 10 199 1.83E-36 T 13-10-2018 Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 Gene3D G3DSA:2.60.40.1840 451 553 4.2E-26 T 13-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily Atc_2150 34ddc9ea9450d719b5ab251729e675ce 882 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 451 552 6.0E-25 T 13-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold Atc_2222 6e102667a158a79bdf7e2d28418e4c16 322 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 155 232 3.1E-9 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2222 6e102667a158a79bdf7e2d28418e4c16 322 Gene3D G3DSA:2.60.40.420 117 294 5.5E-41 T 13-10-2018 IPR008972 Cupredoxin Atc_2222 6e102667a158a79bdf7e2d28418e4c16 322 SUPERFAMILY SSF49503 132 291 1.06E-37 T 13-10-2018 IPR008972 Cupredoxin Atc_2222 6e102667a158a79bdf7e2d28418e4c16 322 Pfam PF06481 COX Aromatic Rich Motif 251 296 9.2E-7 T 13-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 Atc_2222 6e102667a158a79bdf7e2d28418e4c16 322 Gene3D G3DSA:1.10.287.90 32 114 2.2E-19 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2222 6e102667a158a79bdf7e2d28418e4c16 322 SUPERFAMILY SSF81464 31 109 6.21E-13 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2825 8985bc1a8279c8fadb3576b79b640697 404 Gene3D G3DSA:2.40.160.180 47 403 3.7E-52 T 13-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily Atc_2825 8985bc1a8279c8fadb3576b79b640697 404 Pfam PF04966 Carbohydrate-selective porin, OprB family 117 403 3.2E-23 T 13-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 PRINTS PR00171 Sugar transporter signature 272 282 6.4E-30 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 PRINTS PR00171 Sugar transporter signature 384 396 6.4E-30 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 PRINTS PR00171 Sugar transporter signature 361 382 6.4E-30 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 PRINTS PR00171 Sugar transporter signature 117 136 6.4E-30 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 PRINTS PR00171 Sugar transporter signature 34 44 6.4E-30 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 Pfam PF00083 Sugar (and other) transporter 27 458 4.6E-126 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 ProSitePatterns PS00216 Sugar transport proteins signature 1. 80 97 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 ProSitePatterns PS00216 Sugar transport proteins signature 1. 317 333 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 ProSitePatterns PS00217 Sugar transport proteins signature 2. 122 147 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 Gene3D G3DSA:1.20.1250.20 17 462 2.3E-135 T 13-10-2018 Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 SUPERFAMILY SSF103473 11 457 1.96E-75 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_2723 08e8fc6c4dac83ced0c52a122645d861 465 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 20 456 1.7E-128 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Atc_2526 f245e67c513fe0ace126c01262103807 192 Pfam PF12915 Protein of unknown function (DUF3833) 8 170 2.6E-45 T 13-10-2018 IPR024409 Protein of unknown function DUF3833 Atc_1608 64f22ca7a3fe1809d20bfa0b4d5656cf 312 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 296 4.3E-37 T 13-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 Gene3D G3DSA:3.30.420.40 5 314 3.9E-118 T 13-10-2018 Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 2.5E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 6 19 2.5E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 2.5E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 2.5E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 2.5E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 2.5E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 5 313 2.2E-123 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 SUPERFAMILY SSF53067 4 121 3.37E-25 T 13-10-2018 Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 3 331 61.174 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 Pfam PF00814 Glycoprotease family 27 306 6.3E-91 T 13-10-2018 IPR000905 Gcp-like domain Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 SUPERFAMILY SSF53067 101 308 1.9E-39 T 13-10-2018 Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 13-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 6 306 6.0E-105 T 13-10-2018 IPR017861 Kae1/TsaD family Atc_2779 c4d107268c956a28a842ad3dd83754f9 336 Gene3D G3DSA:3.30.420.40 128 293 3.9E-118 T 13-10-2018 Atc_2361 3864a80935c4a292fd03c826f5b1f1f7 166 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 9 165 33.771 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2361 3864a80935c4a292fd03c826f5b1f1f7 166 Gene3D G3DSA:3.30.70.640 9 166 1.9E-64 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2361 3864a80935c4a292fd03c826f5b1f1f7 166 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 11 159 1.2E-59 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2361 3864a80935c4a292fd03c826f5b1f1f7 166 Pfam PF01967 MoaC family 22 157 6.3E-52 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_2361 3864a80935c4a292fd03c826f5b1f1f7 166 SUPERFAMILY SSF55040 18 162 6.8E-56 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_m236 d6d8df2102506b6187cafff13fcc7d30 391 Pfam PF13635 Domain of unknown function (DUF4143) 178 334 2.6E-24 T 13-10-2018 IPR025420 Domain of unknown function DUF4143 Atc_m236 d6d8df2102506b6187cafff13fcc7d30 391 SUPERFAMILY SSF52540 18 181 4.57E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m236 d6d8df2102506b6187cafff13fcc7d30 391 Pfam PF13173 AAA domain 19 138 2.3E-20 T 13-10-2018 Atc_m236 d6d8df2102506b6187cafff13fcc7d30 391 Gene3D G3DSA:3.40.50.300 5 83 2.7E-5 T 13-10-2018 Atc_2539 55a6bef973b3e5c54b0c0a981ed39c31 158 Gene3D G3DSA:3.40.50.12280 2 158 2.8E-79 T 13-10-2018 Atc_2539 55a6bef973b3e5c54b0c0a981ed39c31 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 6.2E-22 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2539 55a6bef973b3e5c54b0c0a981ed39c31 158 SUPERFAMILY SSF56770 9 153 7.06E-67 T 13-10-2018 Atc_2539 55a6bef973b3e5c54b0c0a981ed39c31 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 1.8E-77 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2539 55a6bef973b3e5c54b0c0a981ed39c31 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.24 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2539 55a6bef973b3e5c54b0c0a981ed39c31 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0178 34262aeef4965d24d2d9dd2826b69487 116 Gene3D G3DSA:3.30.870.10 5 116 7.7E-16 T 13-10-2018 Atc_0178 34262aeef4965d24d2d9dd2826b69487 116 SUPERFAMILY SSF56024 11 116 5.83E-16 T 13-10-2018 Atc_0178 34262aeef4965d24d2d9dd2826b69487 116 Pfam PF13091 PLD-like domain 13 116 3.5E-14 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atc_0566 b6e2fecab360693168129950f014ca45 296 Gene3D G3DSA:1.10.620.20 115 295 3.3E-7 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Atc_0566 b6e2fecab360693168129950f014ca45 296 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 25 293 2.1E-48 T 13-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF Atc_1946 e7aece4df0ba883ae09b9e009ec3cde6 460 SUPERFAMILY SSF56954 3 453 8.37E-77 T 13-10-2018 Atc_1946 e7aece4df0ba883ae09b9e009ec3cde6 460 Gene3D G3DSA:2.20.200.10 86 341 1.6E-92 T 13-10-2018 Atc_1946 e7aece4df0ba883ae09b9e009ec3cde6 460 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 24 452 9.8E-90 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Atc_1946 e7aece4df0ba883ae09b9e009ec3cde6 460 Gene3D G3DSA:1.20.1600.10 39 453 1.6E-92 T 13-10-2018 Atc_1946 e7aece4df0ba883ae09b9e009ec3cde6 460 Pfam PF02321 Outer membrane efflux protein 270 450 1.4E-19 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1946 e7aece4df0ba883ae09b9e009ec3cde6 460 Pfam PF02321 Outer membrane efflux protein 49 238 2.3E-15 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1614 331ebfe23b1628ed45a77e6e6e2d8810 332 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 332 3.4E-91 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_1614 331ebfe23b1628ed45a77e6e6e2d8810 332 Gene3D G3DSA:3.20.20.70 2 332 4.7E-71 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_1614 331ebfe23b1628ed45a77e6e6e2d8810 332 SUPERFAMILY SSF102114 7 279 5.1E-56 T 13-10-2018 Atc_1614 331ebfe23b1628ed45a77e6e6e2d8810 332 Pfam PF04055 Radical SAM superfamily 20 165 7.2E-23 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_1614 331ebfe23b1628ed45a77e6e6e2d8810 332 Pfam PF06463 Molybdenum Cofactor Synthesis C 185 314 4.0E-28 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atc_1614 331ebfe23b1628ed45a77e6e6e2d8810 332 SMART SM00729 14 217 3.6E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atc_0669 e4255854260a4920be9c9cd4aebd36f1 297 Pfam PF03167 Uracil DNA glycosylase superfamily 142 288 5.6E-42 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_0669 e4255854260a4920be9c9cd4aebd36f1 297 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 127 288 2.7E-62 T 13-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Atc_0669 e4255854260a4920be9c9cd4aebd36f1 297 SUPERFAMILY SSF52141 116 292 8.83E-60 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_0669 e4255854260a4920be9c9cd4aebd36f1 297 SMART SM00986 141 288 3.4E-38 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_0669 e4255854260a4920be9c9cd4aebd36f1 297 SMART SM00987 141 288 3.4E-38 T 13-10-2018 Atc_0669 e4255854260a4920be9c9cd4aebd36f1 297 Gene3D G3DSA:3.40.470.10 115 296 6.0E-68 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atc_2770 c38f4e7fbc4ef96959f0031b1c983f65 461 Gene3D G3DSA:1.10.10.920 370 461 1.6E-28 T 13-10-2018 Atc_2770 c38f4e7fbc4ef96959f0031b1c983f65 461 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 9 461 3.6E-170 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Atc_2770 c38f4e7fbc4ef96959f0031b1c983f65 461 Gene3D G3DSA:3.80.30.20 4 369 1.6E-116 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Atc_2770 c38f4e7fbc4ef96959f0031b1c983f65 461 Pfam PF04055 Radical SAM superfamily 61 234 6.0E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_2770 c38f4e7fbc4ef96959f0031b1c983f65 461 SMART SM00729 55 278 2.4E-47 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atc_2770 c38f4e7fbc4ef96959f0031b1c983f65 461 PIRSF PIRSF000167 7 461 2.5E-159 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Atc_2770 c38f4e7fbc4ef96959f0031b1c983f65 461 Pfam PF06969 HemN C-terminal domain 369 437 3.9E-13 T 13-10-2018 IPR010723 HemN, C-terminal Atc_2770 c38f4e7fbc4ef96959f0031b1c983f65 461 SUPERFAMILY SSF102114 8 450 1.7E-134 T 13-10-2018 Atc_m075 fe9ee9eb0e138acff0785d8538450502 318 Pfam PF01545 Cation efflux family 36 221 6.0E-42 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Atc_m075 fe9ee9eb0e138acff0785d8538450502 318 SUPERFAMILY SSF160240 231 302 9.42E-9 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Atc_m075 fe9ee9eb0e138acff0785d8538450502 318 Gene3D G3DSA:1.20.1510.10 31 224 4.0E-40 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atc_m075 fe9ee9eb0e138acff0785d8538450502 318 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 32 303 9.6E-75 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Atc_m075 fe9ee9eb0e138acff0785d8538450502 318 SUPERFAMILY SSF161111 31 224 2.48E-50 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atc_1433 a93cebb64e66db388faae912db9a0d90 223 Gene3D G3DSA:3.40.50.1000 13 209 4.7E-48 T 13-10-2018 IPR023214 HAD superfamily Atc_1433 a93cebb64e66db388faae912db9a0d90 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 191 3.5E-29 T 13-10-2018 Atc_1433 a93cebb64e66db388faae912db9a0d90 223 Gene3D G3DSA:1.10.150.240 24 88 4.7E-48 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atc_1433 a93cebb64e66db388faae912db9a0d90 223 SUPERFAMILY SSF56784 11 220 3.53E-54 T 13-10-2018 IPR036412 HAD-like superfamily Atc_1433 a93cebb64e66db388faae912db9a0d90 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 185 6.0E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atc_2771 e4ec55c3754a1765805f5ee0a5e6255b 411 Gene3D G3DSA:3.40.50.12710 57 411 8.5E-94 T 13-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 Atc_2771 e4ec55c3754a1765805f5ee0a5e6255b 411 SUPERFAMILY SSF53335 75 407 2.71E-71 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2771 e4ec55c3754a1765805f5ee0a5e6255b 411 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 145 344 1.0E-35 T 13-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 Atc_0398 1c0b1388cf65a3ba06c63c283a70cdcf 560 SUPERFAMILY SSF52540 403 508 1.5E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0398 1c0b1388cf65a3ba06c63c283a70cdcf 560 PIRSF PIRSF003128 1 560 4.1E-165 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Atc_0398 1c0b1388cf65a3ba06c63c283a70cdcf 560 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 555 1.3E-161 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Atc_0398 1c0b1388cf65a3ba06c63c283a70cdcf 560 SUPERFAMILY SSF52540 1 219 4.66E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0398 1c0b1388cf65a3ba06c63c283a70cdcf 560 Gene3D G3DSA:3.40.50.300 266 556 2.3E-52 T 13-10-2018 Atc_0398 1c0b1388cf65a3ba06c63c283a70cdcf 560 SMART SM00382 21 527 0.006 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0398 1c0b1388cf65a3ba06c63c283a70cdcf 560 Gene3D G3DSA:3.40.50.300 1 239 2.0E-43 T 13-10-2018 Atc_0398 1c0b1388cf65a3ba06c63c283a70cdcf 560 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 511 1.7E-18 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Atc_1p04 5b0a137a423076e08f3c59e6063f3d37 135 Gene3D G3DSA:3.30.70.1290 1 130 3.9E-46 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Atc_1p04 5b0a137a423076e08f3c59e6063f3d37 135 SUPERFAMILY SSF143422 7 133 2.22E-47 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Atc_1p04 5b0a137a423076e08f3c59e6063f3d37 135 Pfam PF01797 Transposase IS200 like 15 132 1.9E-42 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Atc_1p04 5b0a137a423076e08f3c59e6063f3d37 135 SMART SM01321 15 132 9.7E-47 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Atc_0782 f8378017ad4310ed6634a02d4791074b 616 Pfam PF13537 Glutamine amidotransferase domain 45 162 6.3E-38 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Atc_0782 f8378017ad4310ed6634a02d4791074b 616 Gene3D G3DSA:3.60.20.10 4 182 2.2E-51 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_0782 f8378017ad4310ed6634a02d4791074b 616 SUPERFAMILY SSF52402 233 582 8.38E-70 T 13-10-2018 Atc_0782 f8378017ad4310ed6634a02d4791074b 616 PIRSF PIRSF001589 1 611 1.4E-154 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Atc_0782 f8378017ad4310ed6634a02d4791074b 616 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 535 2.4E-130 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Atc_0782 f8378017ad4310ed6634a02d4791074b 616 SUPERFAMILY SSF56235 1 216 8.58E-56 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_0782 f8378017ad4310ed6634a02d4791074b 616 Pfam PF00733 Asparagine synthase 234 543 1.1E-82 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 Gene3D G3DSA:3.50.7.10 192 372 8.3E-241 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 SUPERFAMILY SSF48592 8 521 4.43E-77 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 42.205 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 Gene3D G3DSA:1.10.560.10 8 521 8.3E-241 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 SUPERFAMILY SSF52029 184 376 1.44E-86 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 SUPERFAMILY SSF54849 137 205 1.26E-25 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 PRINTS PR00298 60kDa chaperonin signature 350 375 3.3E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 PRINTS PR00298 60kDa chaperonin signature 27 53 3.3E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 PRINTS PR00298 60kDa chaperonin signature 83 110 3.3E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 PRINTS PR00298 60kDa chaperonin signature 398 419 3.3E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 PRINTS PR00298 60kDa chaperonin signature 268 291 3.3E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.4E-261 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 3.8E-96 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Atc_2205 ed947e1178438e4d57d080daf57a70e3 549 Gene3D G3DSA:3.30.260.10 136 410 8.3E-241 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Atc_0803 1f07532e8e0d196a6e3627e75600c365 663 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 6 662 36.147 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 Atc_0803 1f07532e8e0d196a6e3627e75600c365 663 SUPERFAMILY SSF52540 5 637 1.36E-161 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0803 1f07532e8e0d196a6e3627e75600c365 663 Pfam PF13361 UvrD-like helicase C-terminal domain 273 611 4.3E-68 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Atc_0803 1f07532e8e0d196a6e3627e75600c365 663 Gene3D G3DSA:3.40.50.300 276 630 2.4E-118 T 13-10-2018 Atc_0803 1f07532e8e0d196a6e3627e75600c365 663 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 267 8.3E-67 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Atc_0803 1f07532e8e0d196a6e3627e75600c365 663 Gene3D G3DSA:1.10.10.160 113 183 4.3E-87 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily Atc_0803 1f07532e8e0d196a6e3627e75600c365 663 Gene3D G3DSA:3.40.50.300 10 268 4.3E-87 T 13-10-2018 Atc_0803 1f07532e8e0d196a6e3627e75600c365 663 Gene3D G3DSA:1.10.486.10 379 542 2.4E-118 T 13-10-2018 Atc_2230 36c9b29d6b25803782053c1dee0575b7 180 Pfam PF05494 MlaC protein 23 169 8.6E-40 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Atc_2230 36c9b29d6b25803782053c1dee0575b7 180 PIRSF PIRSF004649 2 179 7.5E-39 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Atc_2230 36c9b29d6b25803782053c1dee0575b7 180 Gene3D G3DSA:3.10.450.50 23 142 4.7E-33 T 13-10-2018 Atc_2230 36c9b29d6b25803782053c1dee0575b7 180 Gene3D G3DSA:1.10.10.640 44 167 4.7E-33 T 13-10-2018 Atc_2230 36c9b29d6b25803782053c1dee0575b7 180 TIGRFAM TIGR03481 HpnM: hopanoid biosynthesis associated membrane protein HpnM 3 174 5.0E-68 T 13-10-2018 IPR017842 Hopanoid biosynthesis-associated membrane protein HpnM Atc_1352 3063b48852250d54b3a2fa689e1d3f73 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 131 8.9E-27 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Atc_1352 3063b48852250d54b3a2fa689e1d3f73 133 Gene3D G3DSA:3.30.420.270 60 127 1.0E-8 T 13-10-2018 Atc_1125 7dc318e78f7a7116f854d466b21aadab 67 Pfam PF00355 Rieske [2Fe-2S] domain 2 50 5.2E-9 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Atc_1125 7dc318e78f7a7116f854d466b21aadab 67 SUPERFAMILY SSF50022 2 64 2.1E-22 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Atc_1125 7dc318e78f7a7116f854d466b21aadab 67 Gene3D G3DSA:2.102.10.10 1 66 1.8E-21 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Atc_0499 806c744964b7621d69dc3fa5a8a857f0 67 PRINTS PR00050 Cold shock protein signature 40 58 2.3E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atc_0499 806c744964b7621d69dc3fa5a8a857f0 67 PRINTS PR00050 Cold shock protein signature 25 34 2.3E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atc_0499 806c744964b7621d69dc3fa5a8a857f0 67 PRINTS PR00050 Cold shock protein signature 4 19 2.3E-18 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atc_0499 806c744964b7621d69dc3fa5a8a857f0 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 13-10-2018 IPR019844 Cold-shock conserved site Atc_0499 806c744964b7621d69dc3fa5a8a857f0 67 SMART SM00357 3 67 1.0E-30 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Atc_0499 806c744964b7621d69dc3fa5a8a857f0 67 SUPERFAMILY SSF50249 1 65 8.36E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0499 806c744964b7621d69dc3fa5a8a857f0 67 PIRSF PIRSF002599 1 67 2.3E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Atc_0499 806c744964b7621d69dc3fa5a8a857f0 67 Gene3D G3DSA:2.40.50.140 1 66 3.5E-31 T 13-10-2018 Atc_0499 806c744964b7621d69dc3fa5a8a857f0 67 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 1.3E-30 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atc_1364 8edc54a0e0297979b142538e079f016d 563 ProSitePatterns PS00080 Multicopper oxidases signature 2. 543 554 - T 13-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 Atc_1364 8edc54a0e0297979b142538e079f016d 563 Gene3D G3DSA:2.60.40.420 67 211 1.1E-42 T 13-10-2018 IPR008972 Cupredoxin Atc_1364 8edc54a0e0297979b142538e079f016d 563 SUPERFAMILY SSF49503 441 560 6.03E-31 T 13-10-2018 IPR008972 Cupredoxin Atc_1364 8edc54a0e0297979b142538e079f016d 563 Gene3D G3DSA:2.60.40.420 396 562 7.7E-41 T 13-10-2018 IPR008972 Cupredoxin Atc_1364 8edc54a0e0297979b142538e079f016d 563 Gene3D G3DSA:2.60.40.420 213 371 2.8E-45 T 13-10-2018 IPR008972 Cupredoxin Atc_1364 8edc54a0e0297979b142538e079f016d 563 Pfam PF07732 Multicopper oxidase 112 214 2.0E-26 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 Atc_1364 8edc54a0e0297979b142538e079f016d 563 SUPERFAMILY SSF49503 221 337 1.58E-22 T 13-10-2018 IPR008972 Cupredoxin Atc_1364 8edc54a0e0297979b142538e079f016d 563 SUPERFAMILY SSF49503 82 215 9.68E-32 T 13-10-2018 IPR008972 Cupredoxin Atc_1364 8edc54a0e0297979b142538e079f016d 563 Pfam PF07731 Multicopper oxidase 455 561 2.9E-22 T 13-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 Atc_1306 6f5789a442cc17c383fc72070878f1a0 280 Gene3D G3DSA:3.40.1190.20 15 279 4.4E-75 T 13-10-2018 IPR029056 Ribokinase-like Atc_1306 6f5789a442cc17c383fc72070878f1a0 280 Pfam PF01256 Carbohydrate kinase 33 272 3.2E-46 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Atc_1306 6f5789a442cc17c383fc72070878f1a0 280 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 10 280 20.718 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Atc_1306 6f5789a442cc17c383fc72070878f1a0 280 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 12 275 1.6E-54 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Atc_1306 6f5789a442cc17c383fc72070878f1a0 280 SUPERFAMILY SSF53613 15 278 3.51E-65 T 13-10-2018 IPR029056 Ribokinase-like Atc_m011 df271b319108e8a647ece605049d6103 183 Pfam PF13358 DDE superfamily endonuclease 10 146 2.0E-34 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Atc_m011 df271b319108e8a647ece605049d6103 183 Gene3D G3DSA:3.30.420.470 9 172 6.7E-10 T 13-10-2018 Atc_2801 7393cf363b032e6595769efbbc9cc92c 342 Gene3D G3DSA:3.30.1150.10 224 341 2.0E-22 T 13-10-2018 Atc_2801 7393cf363b032e6595769efbbc9cc92c 342 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 276 335 4.2E-9 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Atc_2801 7393cf363b032e6595769efbbc9cc92c 342 TIGRFAM TIGR02794 tolA_full: protein TolA 8 335 1.8E-41 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 Atc_2801 7393cf363b032e6595769efbbc9cc92c 342 SUPERFAMILY SSF74653 254 337 7.19E-12 T 13-10-2018 Atc_2801 7393cf363b032e6595769efbbc9cc92c 342 Pfam PF13103 TonB C terminal 253 323 7.9E-15 T 13-10-2018 Atc_m189 af42cd49a4e7ee6c7329c70be641e715 423 Gene3D G3DSA:2.170.130.10 62 187 6.5E-11 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atc_m189 af42cd49a4e7ee6c7329c70be641e715 423 SUPERFAMILY SSF56935 64 404 3.16E-19 T 13-10-2018 Atc_m189 af42cd49a4e7ee6c7329c70be641e715 423 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 177 4.5E-9 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Atc_0252 811d0c04acd9578cde573dea92f7b734 198 Gene3D G3DSA:3.30.1060.10 6 184 4.6E-61 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Atc_0252 811d0c04acd9578cde573dea92f7b734 198 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 18 178 34.307 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Atc_0252 811d0c04acd9578cde573dea92f7b734 198 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 20 170 7.8E-51 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Atc_0252 811d0c04acd9578cde573dea92f7b734 198 SUPERFAMILY SSF55068 17 182 1.57E-64 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Atc_0252 811d0c04acd9578cde573dea92f7b734 198 Pfam PF01625 Peptide methionine sulfoxide reductase 20 173 6.3E-57 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Atc_m140 49e879cafb4b2766c5920563f04bf7a8 80 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 42 72 1.2E-8 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Atc_m140 49e879cafb4b2766c5920563f04bf7a8 80 Gene3D G3DSA:1.20.120.910 3 76 6.3E-12 T 13-10-2018 Atc_0276 0a8c112c6309c9ce38a67a6dc2108215 93 SMART SM00899 8 79 5.8E-7 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Atc_0276 0a8c112c6309c9ce38a67a6dc2108215 93 Pfam PF04023 FeoA domain 9 79 4.6E-10 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Atc_0276 0a8c112c6309c9ce38a67a6dc2108215 93 SUPERFAMILY SSF50037 10 79 9.39E-9 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal Atc_0276 0a8c112c6309c9ce38a67a6dc2108215 93 Gene3D G3DSA:2.30.30.90 9 82 7.1E-10 T 13-10-2018 IPR038157 Ferrous iron transporter, core domain Atc_0739 d3b0dde59ec9be02f2b82644d67a76de 484 Gene3D G3DSA:1.10.287.130 249 324 1.2E-11 T 13-10-2018 Atc_0739 d3b0dde59ec9be02f2b82644d67a76de 484 Gene3D G3DSA:3.30.565.10 325 475 4.1E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0739 d3b0dde59ec9be02f2b82644d67a76de 484 SUPERFAMILY SSF47384 254 326 3.14E-9 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atc_0739 d3b0dde59ec9be02f2b82644d67a76de 484 SMART SM00304 178 230 5.6E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atc_0739 d3b0dde59ec9be02f2b82644d67a76de 484 SUPERFAMILY SSF55874 317 475 4.58E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atc_0739 d3b0dde59ec9be02f2b82644d67a76de 484 SMART SM00387 370 477 9.9E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0739 d3b0dde59ec9be02f2b82644d67a76de 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 474 4.3E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atc_0739 d3b0dde59ec9be02f2b82644d67a76de 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 9.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0739 d3b0dde59ec9be02f2b82644d67a76de 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 9.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0739 d3b0dde59ec9be02f2b82644d67a76de 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 9.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atc_0739 d3b0dde59ec9be02f2b82644d67a76de 484 SMART SM00388 265 330 3.7E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atc_0649 51282fc43bf05cc360d257da69b0e4dd 212 SUPERFAMILY SSF81452 24 209 1.96E-35 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0649 51282fc43bf05cc360d257da69b0e4dd 212 Pfam PF00510 Cytochrome c oxidase subunit III 21 210 1.3E-12 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0649 51282fc43bf05cc360d257da69b0e4dd 212 Gene3D G3DSA:1.20.120.80 24 211 2.7E-35 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2427 617220a3cba88e0b52a8d31b0c38356c 173 SUPERFAMILY SSF55021 90 169 5.64E-11 T 13-10-2018 Atc_2427 617220a3cba88e0b52a8d31b0c38356c 173 Pfam PF13740 ACT domain 92 164 1.0E-5 T 13-10-2018 Atc_2427 617220a3cba88e0b52a8d31b0c38356c 173 Pfam PF13740 ACT domain 4 74 1.1E-12 T 13-10-2018 Atc_2427 617220a3cba88e0b52a8d31b0c38356c 173 SUPERFAMILY SSF55021 4 79 2.42E-13 T 13-10-2018 Atc_2427 617220a3cba88e0b52a8d31b0c38356c 173 Gene3D G3DSA:3.30.70.260 86 169 5.5E-12 T 13-10-2018 Atc_2427 617220a3cba88e0b52a8d31b0c38356c 173 Gene3D G3DSA:3.30.70.260 1 79 1.0E-16 T 13-10-2018 Atc_1509 a6da8d5d6306d8ee6f7820d25ef740eb 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 8 256 4.4E-94 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Atc_1509 a6da8d5d6306d8ee6f7820d25ef740eb 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 12 257 1.5E-81 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Atc_1509 a6da8d5d6306d8ee6f7820d25ef740eb 263 SUPERFAMILY SSF51621 9 258 7.85E-86 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atc_1509 a6da8d5d6306d8ee6f7820d25ef740eb 263 Gene3D G3DSA:3.20.20.60 4 262 1.9E-91 T 13-10-2018 Atc_1509 a6da8d5d6306d8ee6f7820d25ef740eb 263 PIRSF PIRSF000388 1 262 6.7E-92 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Atc_1509 a6da8d5d6306d8ee6f7820d25ef740eb 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 262 35.087 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Atc_0519 936252765de096f9b77ede6dad5eee0f 724 SMART SM00490 490 587 5.7E-7 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_0519 936252765de096f9b77ede6dad5eee0f 724 Pfam PF00271 Helicase conserved C-terminal domain 492 586 2.1E-4 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_0519 936252765de096f9b77ede6dad5eee0f 724 Pfam PF00270 DEAD/DEAH box helicase 216 361 6.9E-11 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atc_0519 936252765de096f9b77ede6dad5eee0f 724 SMART SM00487 193 390 4.4E-20 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_0519 936252765de096f9b77ede6dad5eee0f 724 SUPERFAMILY SSF52540 192 372 1.58E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0519 936252765de096f9b77ede6dad5eee0f 724 TIGRFAM TIGR00595 priA: primosomal protein N' 218 722 4.1E-174 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Atc_0519 936252765de096f9b77ede6dad5eee0f 724 Gene3D G3DSA:1.10.8.630 15 120 1.1E-25 T 13-10-2018 Atc_0519 936252765de096f9b77ede6dad5eee0f 724 Gene3D G3DSA:3.40.50.300 187 374 4.1E-67 T 13-10-2018 Atc_0519 936252765de096f9b77ede6dad5eee0f 724 Hamap MF_00983 Probable primosomal protein N' [priA]. 18 724 23.177 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Atc_0519 936252765de096f9b77ede6dad5eee0f 724 SUPERFAMILY SSF52540 400 619 7.84E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0351 cf2aa5a5ca8e3ffe82d0c4c61216d506 242 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 234 2.2E-74 T 13-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Atc_0351 cf2aa5a5ca8e3ffe82d0c4c61216d506 242 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 34.583 T 13-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Atc_0351 cf2aa5a5ca8e3ffe82d0c4c61216d506 242 Pfam PF00977 Histidine biosynthesis protein 3 231 5.6E-75 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Atc_0351 cf2aa5a5ca8e3ffe82d0c4c61216d506 242 Gene3D G3DSA:3.20.20.70 1 242 5.9E-83 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0351 cf2aa5a5ca8e3ffe82d0c4c61216d506 242 SUPERFAMILY SSF51366 1 237 9.42E-72 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atc_0327 68238ac6c0d9248eccf7d85a352a0ecd 173 SUPERFAMILY SSF50324 4 167 6.15E-63 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Atc_0327 68238ac6c0d9248eccf7d85a352a0ecd 173 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 173 35.01 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Atc_0327 68238ac6c0d9248eccf7d85a352a0ecd 173 Pfam PF00719 Inorganic pyrophosphatase 18 168 2.0E-53 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Atc_0327 68238ac6c0d9248eccf7d85a352a0ecd 173 Gene3D G3DSA:3.90.80.10 1 172 9.1E-67 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Atc_2004 0e9fe55664d7be9b17ac7052c79afdbe 292 SUPERFAMILY SSF56925 51 205 7.3E-6 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Atc_0588 e41b53f50abe0a0de1f404edc7655350 561 SUPERFAMILY SSF56112 97 435 1.48E-41 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Atc_0588 e41b53f50abe0a0de1f404edc7655350 561 Pfam PF03109 ABC1 family 115 234 1.1E-32 T 13-10-2018 IPR004147 UbiB domain Atc_0588 e41b53f50abe0a0de1f404edc7655350 561 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 8 444 5.7E-164 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Atc_1406 2dfb10a3ddbe00e7cbe000ea9991041b 263 Pfam PF07238 PilZ domain 117 228 2.8E-11 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Atc_1406 2dfb10a3ddbe00e7cbe000ea9991041b 263 Gene3D G3DSA:2.40.10.220 118 233 1.9E-17 T 13-10-2018 Atc_1391 ebed146173233659506e66aa55017007 281 Gene3D G3DSA:1.10.3660.10 171 276 1.7E-27 T 13-10-2018 Atc_1391 ebed146173233659506e66aa55017007 281 Gene3D G3DSA:3.40.50.720 1 168 3.2E-35 T 13-10-2018 Atc_1391 ebed146173233659506e66aa55017007 281 SUPERFAMILY SSF48179 170 275 3.06E-26 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atc_1391 ebed146173233659506e66aa55017007 281 Pfam PF02153 Prephenate dehydrogenase 59 263 3.3E-48 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Atc_1391 ebed146173233659506e66aa55017007 281 SUPERFAMILY SSF51735 1 167 5.49E-25 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1393 4a19c571d248c7c3da9c57c5bb0dd627 235 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 211 2.2E-70 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Atc_1393 4a19c571d248c7c3da9c57c5bb0dd627 235 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 31.181 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Atc_1393 4a19c571d248c7c3da9c57c5bb0dd627 235 Gene3D G3DSA:3.40.50.300 1 222 4.6E-73 T 13-10-2018 Atc_1393 4a19c571d248c7c3da9c57c5bb0dd627 235 SUPERFAMILY SSF52540 6 218 3.39E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1393 4a19c571d248c7c3da9c57c5bb0dd627 235 Pfam PF02224 Cytidylate kinase 8 211 8.7E-68 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Atc_2448 dea3232137fc30641f4c8c6f426d9c48 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Atc_2448 dea3232137fc30641f4c8c6f426d9c48 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 1.2E-13 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atc_2448 dea3232137fc30641f4c8c6f426d9c48 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 1.2E-13 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atc_2448 dea3232137fc30641f4c8c6f426d9c48 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 1.2E-13 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atc_2448 dea3232137fc30641f4c8c6f426d9c48 169 PIRSF PIRSF001467 1 169 1.3E-28 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Atc_2448 dea3232137fc30641f4c8c6f426d9c48 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 165 3.9E-49 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atc_2448 dea3232137fc30641f4c8c6f426d9c48 169 Gene3D G3DSA:2.40.100.10 2 167 4.5E-68 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Atc_2448 dea3232137fc30641f4c8c6f426d9c48 169 SUPERFAMILY SSF50891 6 165 2.05E-59 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Atc_2107 2c94e55a5685e223f881e1d0ffd95922 386 Gene3D G3DSA:3.70.10.10 130 314 3.5E-16 T 13-10-2018 Atc_2107 2c94e55a5685e223f881e1d0ffd95922 386 Gene3D G3DSA:3.10.150.10 38 241 3.5E-16 T 13-10-2018 Atc_1456 ee7f0d4ed935a30ea54eeea79927c4c3 95 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 65 15.111 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Atc_1456 ee7f0d4ed935a30ea54eeea79927c4c3 95 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 33 5.0E-4 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Atc_1456 ee7f0d4ed935a30ea54eeea79927c4c3 95 Gene3D G3DSA:3.30.70.1680 1 61 2.9E-18 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Atc_1456 ee7f0d4ed935a30ea54eeea79927c4c3 95 SUPERFAMILY SSF117130 2 54 1.31E-13 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Atc_1456 ee7f0d4ed935a30ea54eeea79927c4c3 95 Pfam PF02599 Global regulator protein family 2 52 6.1E-17 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Atc_1422 9e77920af825f641a8505dfe990a737f 402 Pfam PF16074 Type IV Pilus-assembly protein W 267 396 2.1E-24 T 13-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 Atc_1422 9e77920af825f641a8505dfe990a737f 402 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Atc_0312 e8eb33b04964b386b092ad76ab81f814 319 Gene3D G3DSA:3.30.70.2130 136 202 2.0E-5 T 13-10-2018 Atc_1647 014d1fa7bb19a4e5a03a7f3034581a64 329 Gene3D G3DSA:3.40.50.720 3 321 1.9E-118 T 13-10-2018 Atc_1647 014d1fa7bb19a4e5a03a7f3034581a64 329 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 327 47.211 T 13-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 Atc_1647 014d1fa7bb19a4e5a03a7f3034581a64 329 Gene3D G3DSA:3.90.25.10 166 308 1.9E-118 T 13-10-2018 Atc_1647 014d1fa7bb19a4e5a03a7f3034581a64 329 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 326 1.8E-124 T 13-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 Atc_1647 014d1fa7bb19a4e5a03a7f3034581a64 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 239 4.7E-43 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atc_1647 014d1fa7bb19a4e5a03a7f3034581a64 329 SUPERFAMILY SSF51735 2 327 3.42E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1982 6ad0f46dc7a9321b7c193b84764f9e47 402 Gene3D G3DSA:1.10.150.130 96 205 1.1E-13 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_1982 6ad0f46dc7a9321b7c193b84764f9e47 402 SUPERFAMILY SSF56349 99 374 9.71E-59 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_1982 6ad0f46dc7a9321b7c193b84764f9e47 402 Pfam PF13356 Arm DNA-binding domain 25 94 6.1E-12 T 13-10-2018 IPR025166 Integrase, DNA-binding domain Atc_1982 6ad0f46dc7a9321b7c193b84764f9e47 402 Pfam PF00589 Phage integrase family 203 365 4.0E-24 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_1982 6ad0f46dc7a9321b7c193b84764f9e47 402 Gene3D G3DSA:3.30.160.390 5 95 2.2E-10 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Atc_1982 6ad0f46dc7a9321b7c193b84764f9e47 402 Gene3D G3DSA:1.10.443.10 206 384 1.7E-31 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_2174 20f5cf56737aa68be701fc2700fb1b56 206 Pfam PF01416 tRNA pseudouridine synthase 83 185 6.0E-27 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2174 20f5cf56737aa68be701fc2700fb1b56 206 Gene3D G3DSA:3.30.70.580 1 45 4.0E-8 T 13-10-2018 Atc_2174 20f5cf56737aa68be701fc2700fb1b56 206 SUPERFAMILY SSF55120 1 196 7.91E-59 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2174 20f5cf56737aa68be701fc2700fb1b56 206 Gene3D G3DSA:3.30.70.660 46 182 2.9E-46 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Atc_2179 f1ec78a4697988a1999b995427363baa 189 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 8 189 22.27 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Atc_2179 f1ec78a4697988a1999b995427363baa 189 SUPERFAMILY SSF53448 10 189 4.73E-28 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2179 f1ec78a4697988a1999b995427363baa 189 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 11 189 1.9E-52 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Atc_2179 f1ec78a4697988a1999b995427363baa 189 Gene3D G3DSA:3.90.550.10 9 189 1.1E-49 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2179 f1ec78a4697988a1999b995427363baa 189 Pfam PF12804 MobA-like NTP transferase domain 12 167 7.6E-31 T 13-10-2018 IPR025877 MobA-like NTP transferase Atc_0242 0ab50a6f6a6147b7a1ccef593656656f 328 Gene3D G3DSA:3.20.20.300 1 318 4.7E-106 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Atc_0242 0ab50a6f6a6147b7a1ccef593656656f 328 SUPERFAMILY SSF51445 1 307 3.58E-81 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Atc_0242 0ab50a6f6a6147b7a1ccef593656656f 328 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 3 305 6.5E-72 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Atc_1015 723e6a75fdd701a2671be5d599a0b1d6 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 291 2.5E-109 T 13-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Atc_1015 723e6a75fdd701a2671be5d599a0b1d6 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 303 8.0E-41 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Atc_1015 723e6a75fdd701a2671be5d599a0b1d6 312 Pfam PF00698 Acyl transferase domain 7 279 4.0E-37 T 13-10-2018 IPR014043 Acyl transferase Atc_1015 723e6a75fdd701a2671be5d599a0b1d6 312 SUPERFAMILY SSF52151 5 311 1.96E-75 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Atc_1015 723e6a75fdd701a2671be5d599a0b1d6 312 Gene3D G3DSA:3.40.366.10 7 285 1.5E-100 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Atc_1015 723e6a75fdd701a2671be5d599a0b1d6 312 Gene3D G3DSA:3.30.70.250 126 198 1.5E-100 T 13-10-2018 Atc_1015 723e6a75fdd701a2671be5d599a0b1d6 312 SUPERFAMILY SSF55048 129 198 1.16E-17 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Atc_1015 723e6a75fdd701a2671be5d599a0b1d6 312 PIRSF PIRSF000446 2 312 6.9E-111 T 13-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Atc_0248 9f55c58a025e72c9bf7676edd33525d1 252 Pfam PF01988 VIT family 37 244 4.4E-54 T 13-10-2018 IPR008217 Ccc1 family Atc_2763 6c619c55f71a490d75b8fa86e2edb7b6 356 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 216 352 2.3E-55 T 13-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Atc_2763 6c619c55f71a490d75b8fa86e2edb7b6 356 Gene3D G3DSA:3.40.50.620 195 355 2.6E-33 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2763 6c619c55f71a490d75b8fa86e2edb7b6 356 Gene3D G3DSA:3.40.50.10490 2 189 3.0E-64 T 13-10-2018 Atc_2763 6c619c55f71a490d75b8fa86e2edb7b6 356 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.011 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Atc_2763 6c619c55f71a490d75b8fa86e2edb7b6 356 Pfam PF13580 SIS domain 10 144 4.9E-26 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atc_2763 6c619c55f71a490d75b8fa86e2edb7b6 356 SUPERFAMILY SSF52374 220 351 1.04E-21 T 13-10-2018 Atc_2763 6c619c55f71a490d75b8fa86e2edb7b6 356 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 222 286 1.2E-12 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Atc_2763 6c619c55f71a490d75b8fa86e2edb7b6 356 Pfam PF01467 Cytidylyltransferase-like 224 316 5.9E-13 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Atc_2763 6c619c55f71a490d75b8fa86e2edb7b6 356 SUPERFAMILY SSF53697 4 189 1.86E-46 T 13-10-2018 Atc_0140 419ecaf907a6d047713f5f6a7bb38f84 393 SUPERFAMILY SSF56935 47 352 2.02E-8 T 13-10-2018 Atc_0140 419ecaf907a6d047713f5f6a7bb38f84 393 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 43 387 1.3E-66 T 13-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 Atc_2542 1588bd0de18710b2844c9800fdd311f9 163 SUPERFAMILY SSF52833 3 158 3.58E-54 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2542 1588bd0de18710b2844c9800fdd311f9 163 Gene3D G3DSA:3.40.30.10 74 162 1.8E-27 T 13-10-2018 Atc_2542 1588bd0de18710b2844c9800fdd311f9 163 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2542 1588bd0de18710b2844c9800fdd311f9 163 Gene3D G3DSA:1.10.10.1590 2 73 1.7E-22 T 13-10-2018 Atc_2542 1588bd0de18710b2844c9800fdd311f9 163 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 10 155 7.3E-57 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2542 1588bd0de18710b2844c9800fdd311f9 163 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 15 155 2.6E-54 T 13-10-2018 Atc_2542 1588bd0de18710b2844c9800fdd311f9 163 PIRSF PIRSF000216 1 163 4.2E-61 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0164 7f6011a9adbc3ee1c122a3573ac5eb41 306 Pfam PF03524 Conjugal transfer protein 126 301 2.4E-11 T 13-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Atc_2142 af190bc8ebefa721c349e78e834c1243 510 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 484 9.9E-126 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Atc_2142 af190bc8ebefa721c349e78e834c1243 510 Pfam PF02321 Outer membrane efflux protein 83 273 1.1E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_2142 af190bc8ebefa721c349e78e834c1243 510 Pfam PF02321 Outer membrane efflux protein 302 482 3.0E-32 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_2142 af190bc8ebefa721c349e78e834c1243 510 Gene3D G3DSA:1.20.1600.10 73 485 4.1E-120 T 13-10-2018 Atc_2142 af190bc8ebefa721c349e78e834c1243 510 SUPERFAMILY SSF56954 8 487 1.83E-102 T 13-10-2018 Atc_2142 af190bc8ebefa721c349e78e834c1243 510 Gene3D G3DSA:2.20.200.10 120 373 4.1E-120 T 13-10-2018 Atc_0067 9e820a818ca37addcda70dc0fa54e511 315 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 282 2.1E-100 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Atc_0067 9e820a818ca37addcda70dc0fa54e511 315 Gene3D G3DSA:3.40.1010.20 97 194 8.7E-112 T 13-10-2018 Atc_0067 9e820a818ca37addcda70dc0fa54e511 315 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 284 38.77 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Atc_0067 9e820a818ca37addcda70dc0fa54e511 315 Gene3D G3DSA:3.40.1010.20 6 280 8.7E-112 T 13-10-2018 Atc_0067 9e820a818ca37addcda70dc0fa54e511 315 Gene3D G3DSA:3.40.50.11270 12 96 8.7E-112 T 13-10-2018 Atc_0067 9e820a818ca37addcda70dc0fa54e511 315 Pfam PF02401 LytB protein 3 280 8.4E-93 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Atc_2811 10b2dd5b12bec4d3f143fc8f8bb4ba82 419 SMART SM00052 5 208 0.0046 T 13-10-2018 IPR001633 EAL domain Atc_2811 10b2dd5b12bec4d3f143fc8f8bb4ba82 419 Pfam PF00563 EAL domain 92 206 1.5E-8 T 13-10-2018 IPR001633 EAL domain Atc_2811 10b2dd5b12bec4d3f143fc8f8bb4ba82 419 Gene3D G3DSA:3.20.20.450 64 209 5.2E-13 T 13-10-2018 IPR035919 EAL domain superfamily Atc_2811 10b2dd5b12bec4d3f143fc8f8bb4ba82 419 SUPERFAMILY SSF109604 199 415 3.01E-32 T 13-10-2018 Atc_2811 10b2dd5b12bec4d3f143fc8f8bb4ba82 419 PIRSF PIRSF003180 15 419 2.1E-90 T 13-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Atc_2811 10b2dd5b12bec4d3f143fc8f8bb4ba82 419 SUPERFAMILY SSF141868 18 210 1.83E-20 T 13-10-2018 IPR035919 EAL domain superfamily Atc_2811 10b2dd5b12bec4d3f143fc8f8bb4ba82 419 Gene3D G3DSA:1.10.3210.10 210 408 3.8E-19 T 13-10-2018 Atc_2811 10b2dd5b12bec4d3f143fc8f8bb4ba82 419 Pfam PF08668 HDOD domain 217 298 5.9E-9 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Atc_1039 94bf151135e08fdb2e610c9a36c3364a 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 2.2E-23 T 13-10-2018 Atc_1039 94bf151135e08fdb2e610c9a36c3364a 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 2.2E-23 T 13-10-2018 Atc_1039 94bf151135e08fdb2e610c9a36c3364a 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 2.2E-23 T 13-10-2018 Atc_1039 94bf151135e08fdb2e610c9a36c3364a 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 2.2E-23 T 13-10-2018 Atc_1039 94bf151135e08fdb2e610c9a36c3364a 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 265 2.2E-23 T 13-10-2018 Atc_1039 94bf151135e08fdb2e610c9a36c3364a 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 217 238 2.2E-23 T 13-10-2018 Atc_1039 94bf151135e08fdb2e610c9a36c3364a 548 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 65 113 6.1E-10 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1039 94bf151135e08fdb2e610c9a36c3364a 548 Pfam PF00361 Proton-conducting membrane transporter 127 344 7.3E-34 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2352 cafad47e8bf1c839f0bebd53bebb8312 226 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 73 84 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atc_2352 cafad47e8bf1c839f0bebd53bebb8312 226 Gene3D G3DSA:1.10.1060.10 3 105 3.4E-7 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atc_2352 cafad47e8bf1c839f0bebd53bebb8312 226 Pfam PF13183 4Fe-4S dicluster domain 24 86 3.3E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atc_2352 cafad47e8bf1c839f0bebd53bebb8312 226 SUPERFAMILY SSF46548 16 105 3.14E-15 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atc_1642 6d24205899529a2ee637b50d6ea16e92 403 Gene3D G3DSA:1.20.1250.20 7 392 8.8E-21 T 13-10-2018 Atc_1642 6d24205899529a2ee637b50d6ea16e92 403 Pfam PF07690 Major Facilitator Superfamily 55 341 4.6E-12 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_1642 6d24205899529a2ee637b50d6ea16e92 403 SUPERFAMILY SSF103473 8 397 3.4E-32 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_0249 fef8f2e5227d251012112821c77073c7 294 Gene3D G3DSA:3.40.50.1100 35 140 1.8E-105 T 13-10-2018 Atc_0249 fef8f2e5227d251012112821c77073c7 294 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 281 1.2E-64 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Atc_0249 fef8f2e5227d251012112821c77073c7 294 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Atc_0249 fef8f2e5227d251012112821c77073c7 294 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.2E-118 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Atc_0249 fef8f2e5227d251012112821c77073c7 294 Gene3D G3DSA:3.40.50.1100 8 288 1.8E-105 T 13-10-2018 Atc_0249 fef8f2e5227d251012112821c77073c7 294 TIGRFAM TIGR01138 cysM: cysteine synthase B 4 292 4.4E-130 T 13-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Atc_0249 fef8f2e5227d251012112821c77073c7 294 SUPERFAMILY SSF53686 4 292 7.6E-90 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Atc_0927 887ddc0a71b8d4cad00d68d6314e041f 110 Gene3D G3DSA:3.30.190.10 1 110 1.4E-46 T 13-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0927 887ddc0a71b8d4cad00d68d6314e041f 110 SMART SM00961 12 109 4.7E-55 T 13-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0927 887ddc0a71b8d4cad00d68d6314e041f 110 SUPERFAMILY SSF55239 4 109 4.84E-44 T 13-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_0927 887ddc0a71b8d4cad00d68d6314e041f 110 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 13 108 1.8E-41 T 13-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Atc_2857 8a7d4d6d50a8ef7f7ae93a9737a23d2d 377 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 360 32.594 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Atc_2857 8a7d4d6d50a8ef7f7ae93a9737a23d2d 377 Gene3D G3DSA:3.30.420.40 133 320 5.0E-100 T 13-10-2018 Atc_2857 8a7d4d6d50a8ef7f7ae93a9737a23d2d 377 SUPERFAMILY SSF53067 2 315 1.81E-13 T 13-10-2018 Atc_2857 8a7d4d6d50a8ef7f7ae93a9737a23d2d 377 Gene3D G3DSA:3.30.420.40 5 355 5.0E-100 T 13-10-2018 Atc_2857 8a7d4d6d50a8ef7f7ae93a9737a23d2d 377 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 1 359 8.9E-92 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Atc_m001 47bb9378737f7fe8b12f0270f93b2f38 272 Pfam PF01618 MotA/TolQ/ExbB proton channel family 118 235 1.7E-25 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atc_1858 99d2b4fc999352f91e1e69e0855815d8 251 SUPERFAMILY SSF52317 43 233 2.95E-38 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_1858 99d2b4fc999352f91e1e69e0855815d8 251 Gene3D G3DSA:3.40.50.880 1 243 2.5E-55 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_1858 99d2b4fc999352f91e1e69e0855815d8 251 Pfam PF00117 Glutamine amidotransferase class-I 18 184 1.1E-12 T 13-10-2018 IPR017926 Glutamine amidotransferase Atc_2128 a220409b4a77135e5a625a03a9961dee 379 SUPERFAMILY SSF53335 21 172 1.5E-15 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2128 a220409b4a77135e5a625a03a9961dee 379 Gene3D G3DSA:3.40.50.150 23 192 8.5E-12 T 13-10-2018 Atc_2128 a220409b4a77135e5a625a03a9961dee 379 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 46 60 9.3E-6 T 13-10-2018 Atc_2128 a220409b4a77135e5a625a03a9961dee 379 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 131 155 9.3E-6 T 13-10-2018 Atc_2128 a220409b4a77135e5a625a03a9961dee 379 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 9.3E-6 T 13-10-2018 Atc_1372 bc2a469a4dfdf48571b813a11750f4be 379 SMART SM00564 234 265 19.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1372 bc2a469a4dfdf48571b813a11750f4be 379 SMART SM00564 271 303 0.17 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1372 bc2a469a4dfdf48571b813a11750f4be 379 SMART SM00564 97 129 1.4E-6 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1372 bc2a469a4dfdf48571b813a11750f4be 379 SMART SM00564 183 214 1.7E-4 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atc_1372 bc2a469a4dfdf48571b813a11750f4be 379 SUPERFAMILY SSF50998 41 357 2.58E-59 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Atc_1372 bc2a469a4dfdf48571b813a11750f4be 379 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 2 374 4.2E-100 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB Atc_1372 bc2a469a4dfdf48571b813a11750f4be 379 Pfam PF13360 PQQ-like domain 82 301 7.3E-46 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atc_1372 bc2a469a4dfdf48571b813a11750f4be 379 Gene3D G3DSA:2.130.10.10 16 379 5.1E-81 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_1372 bc2a469a4dfdf48571b813a11750f4be 379 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 376 25.141 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB Atc_2422 642384057752c9df4dff77f5ffb58e46 76 Gene3D G3DSA:3.30.110.40 1 76 3.4E-26 T 13-10-2018 IPR036868 TusA-like domain superfamily Atc_2422 642384057752c9df4dff77f5ffb58e46 76 Pfam PF01206 Sulfurtransferase TusA 5 74 1.2E-20 T 13-10-2018 IPR001455 TusA-like domain Atc_2422 642384057752c9df4dff77f5ffb58e46 76 SUPERFAMILY SSF64307 4 74 2.09E-22 T 13-10-2018 IPR036868 TusA-like domain superfamily Atc_2422 642384057752c9df4dff77f5ffb58e46 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 13-10-2018 IPR001455 TusA-like domain Atc_2034 085840c158bbce1ddcae05ed4fca275c 219 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 20 178 3.7E-17 T 13-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Atc_0879 ef5d65e17be0cf3de4acd1db4b8b581f 145 Pfam PF11911 Protein of unknown function (DUF3429) 7 138 1.6E-31 T 13-10-2018 IPR021836 Protein of unknown function DUF3429 Atc_2837 8231eca6fee49c21e7334ada507ec4a6 200 PIRSF PIRSF004649 1 200 3.7E-53 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Atc_2837 8231eca6fee49c21e7334ada507ec4a6 200 Pfam PF05494 MlaC protein 32 195 3.0E-49 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Atc_2837 8231eca6fee49c21e7334ada507ec4a6 200 Gene3D G3DSA:3.10.450.710 23 200 1.6E-47 T 13-10-2018 Atc_m212 6ddf853c94a724ed9a00ce44019f31d8 405 Pfam PF01610 Transposase 157 391 1.4E-72 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_m212 6ddf853c94a724ed9a00ce44019f31d8 405 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 93 142 4.4E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_m212 6ddf853c94a724ed9a00ce44019f31d8 405 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 46 87 4.4E-11 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1851 6ddf853c94a724ed9a00ce44019f31d8 405 Pfam PF01610 Transposase 157 391 1.4E-72 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_1851 6ddf853c94a724ed9a00ce44019f31d8 405 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 93 142 4.4E-15 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_1851 6ddf853c94a724ed9a00ce44019f31d8 405 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 46 87 4.4E-11 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_1942 88bb86da46c46fec708cbf7ff86e1061 280 SUPERFAMILY SSF111369 71 157 3.01E-7 T 13-10-2018 Atc_1942 88bb86da46c46fec708cbf7ff86e1061 280 Pfam PF00529 HlyD membrane-fusion protein of T1SS 71 230 2.0E-6 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_1942 88bb86da46c46fec708cbf7ff86e1061 280 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 87 183 2.4E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_1942 88bb86da46c46fec708cbf7ff86e1061 280 Gene3D G3DSA:2.40.30.170 125 241 1.3E-28 T 13-10-2018 Atc_1701 f6974b0ac831a0bdfa5b1a0f91dc4620 170 SUPERFAMILY SSF51971 1 154 4.47E-11 T 13-10-2018 Atc_1701 f6974b0ac831a0bdfa5b1a0f91dc4620 170 Gene3D G3DSA:3.30.9.10 22 110 2.4E-21 T 13-10-2018 Atc_1701 f6974b0ac831a0bdfa5b1a0f91dc4620 170 Gene3D G3DSA:3.50.50.60 1 150 2.4E-21 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1701 f6974b0ac831a0bdfa5b1a0f91dc4620 170 SUPERFAMILY SSF54373 22 110 7.85E-9 T 13-10-2018 Atc_1701 f6974b0ac831a0bdfa5b1a0f91dc4620 170 Pfam PF01266 FAD dependent oxidoreductase 1 150 1.5E-21 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atc_m111 44b1d394699942ea079f57d7c4cb0f14 76 SUPERFAMILY SSF51182 11 69 3.03E-5 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Atc_0060 ba76f822f0950b2843717f39ca7a4d05 191 Gene3D G3DSA:1.20.120.1490 78 180 6.2E-10 T 13-10-2018 Atc_0060 ba76f822f0950b2843717f39ca7a4d05 191 Pfam PF07813 LTXXQ motif family protein 82 171 3.0E-8 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 Atc_0979 26fec8b873a506db16fd3a2d76056cde 306 SUPERFAMILY SSF103481 46 146 2.22E-15 T 13-10-2018 Atc_0979 26fec8b873a506db16fd3a2d76056cde 306 SUPERFAMILY SSF103481 191 291 3.01E-13 T 13-10-2018 Atc_0979 26fec8b873a506db16fd3a2d76056cde 306 Pfam PF00892 EamA-like transporter family 15 143 2.9E-24 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atc_0979 26fec8b873a506db16fd3a2d76056cde 306 Pfam PF00892 EamA-like transporter family 154 288 1.9E-18 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atc_m028 2e234d54b5f62c576a0824ae62fc478d 128 Gene3D G3DSA:3.10.450.50 2 125 1.4E-48 T 13-10-2018 Atc_m028 2e234d54b5f62c576a0824ae62fc478d 128 Pfam PF11533 Protein of unknown function (DUF3225) 5 125 1.5E-55 T 13-10-2018 IPR024507 Protein of unknown function DUF3225 Atc_m028 2e234d54b5f62c576a0824ae62fc478d 128 SUPERFAMILY SSF54427 5 125 2.43E-35 T 13-10-2018 IPR032710 NTF2-like domain superfamily Atc_0097 86930d47d05a04fe8839f7c1a354f47f 87 SUPERFAMILY SSF143120 6 79 8.89E-17 T 13-10-2018 IPR036165 YefM-like superfamily Atc_0097 86930d47d05a04fe8839f7c1a354f47f 87 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 9 60 6.1E-11 T 13-10-2018 Atc_0097 86930d47d05a04fe8839f7c1a354f47f 87 Gene3D G3DSA:3.40.1620.40 9 67 1.9E-6 T 13-10-2018 Atc_0097 86930d47d05a04fe8839f7c1a354f47f 87 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 6 73 1.1E-16 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Atc_0259 cfb9c5f2dcecd4eaaba46be7a110ccf9 277 Pfam PF05114 Protein of unknown function (DUF692) 11 271 8.9E-96 T 13-10-2018 IPR007801 Uncharacterised protein family UPF0276 Atc_0259 cfb9c5f2dcecd4eaaba46be7a110ccf9 277 SUPERFAMILY SSF51658 28 253 2.13E-16 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily Atc_0259 cfb9c5f2dcecd4eaaba46be7a110ccf9 277 Gene3D G3DSA:3.20.20.150 8 276 1.0E-83 T 13-10-2018 Atc_1371 59566c7725998209502d8e96231f1b62 203 Gene3D G3DSA:1.25.40.10 33 145 1.0E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_1371 59566c7725998209502d8e96231f1b62 203 Pfam PF09976 Tetratricopeptide repeat-like domain 12 200 2.0E-34 T 13-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 Atc_2624 4a428ae795e7a8472f8a466fd36a98bf 300 Gene3D G3DSA:3.30.2010.10 78 170 1.0E-30 T 13-10-2018 Atc_2624 4a428ae795e7a8472f8a466fd36a98bf 300 Pfam PF01435 Peptidase family M48 91 290 4.2E-39 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Atc_2442 178580688d974a2f20b91b5e25175a6d 600 SUPERFAMILY SSF52091 453 563 4.12E-18 T 13-10-2018 IPR036513 STAS domain superfamily Atc_2442 178580688d974a2f20b91b5e25175a6d 600 Gene3D G3DSA:3.30.750.24 450 563 2.1E-24 T 13-10-2018 IPR036513 STAS domain superfamily Atc_2442 178580688d974a2f20b91b5e25175a6d 600 Pfam PF01740 STAS domain 454 557 1.3E-14 T 13-10-2018 IPR002645 STAS domain Atc_2442 178580688d974a2f20b91b5e25175a6d 600 TIGRFAM TIGR00815 sulP: sulfate permease 17 557 1.5E-126 T 13-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Atc_2442 178580688d974a2f20b91b5e25175a6d 600 Pfam PF00916 Sulfate permease family 30 401 5.8E-96 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Atc_1670 4b07abe22bddaa74fc470181916aae96 178 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 43 152 8.1E-22 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1670 4b07abe22bddaa74fc470181916aae96 178 SUPERFAMILY SSF56770 30 155 6.8E-45 T 13-10-2018 Atc_1670 4b07abe22bddaa74fc470181916aae96 178 Gene3D G3DSA:3.40.50.12280 17 176 3.3E-47 T 13-10-2018 Atc_0919 77d76b6dc909c38bd73ac445fb04bf13 107 Pfam PF00037 4Fe-4S binding domain 34 55 1.2E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atc_0919 77d76b6dc909c38bd73ac445fb04bf13 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atc_0919 77d76b6dc909c38bd73ac445fb04bf13 107 SUPERFAMILY SSF54862 3 99 7.09E-24 T 13-10-2018 Atc_0919 77d76b6dc909c38bd73ac445fb04bf13 107 Gene3D G3DSA:3.30.70.20 2 106 1.8E-32 T 13-10-2018 Atc_0919 77d76b6dc909c38bd73ac445fb04bf13 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 6.5E-16 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atc_0919 77d76b6dc909c38bd73ac445fb04bf13 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 6.5E-16 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atc_0919 77d76b6dc909c38bd73ac445fb04bf13 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 6.5E-16 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atc_0919 77d76b6dc909c38bd73ac445fb04bf13 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 106 4.5E-17 T 13-10-2018 IPR022569 Ferredoxin, C-terminal Atc_0225 2765b032e06e09052b45ee81d1f5f4b0 469 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 1 469 3.3E-159 T 13-10-2018 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 Atc_0225 2765b032e06e09052b45ee81d1f5f4b0 469 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 4 469 8.8E-122 T 13-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Atc_0225 2765b032e06e09052b45ee81d1f5f4b0 469 Pfam PF02397 Bacterial sugar transferase 272 463 2.7E-66 T 13-10-2018 IPR003362 Bacterial sugar transferase Atc_1797 7642186b2c1ae53400f52cd0e360c6b8 263 Pfam PF03988 Repeat of Unknown Function (DUF347) 144 191 1.9E-10 T 13-10-2018 IPR007136 Protein of unknown function DUF347 Atc_1797 7642186b2c1ae53400f52cd0e360c6b8 263 Pfam PF03988 Repeat of Unknown Function (DUF347) 27 75 8.5E-7 T 13-10-2018 IPR007136 Protein of unknown function DUF347 Atc_1797 7642186b2c1ae53400f52cd0e360c6b8 263 Pfam PF03988 Repeat of Unknown Function (DUF347) 199 254 1.2E-12 T 13-10-2018 IPR007136 Protein of unknown function DUF347 Atc_1797 7642186b2c1ae53400f52cd0e360c6b8 263 Pfam PF03988 Repeat of Unknown Function (DUF347) 79 128 6.5E-11 T 13-10-2018 IPR007136 Protein of unknown function DUF347 Atc_2366 854869b6142e47526bbba6076950fd2a 170 PIRSF PIRSF010312 2 170 3.1E-42 T 13-10-2018 IPR016568 Sulphur oxidation, SoxY Atc_2366 854869b6142e47526bbba6076950fd2a 170 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 6 170 1.0E-42 T 13-10-2018 IPR016568 Sulphur oxidation, SoxY Atc_2366 854869b6142e47526bbba6076950fd2a 170 Pfam PF13501 Sulfur oxidation protein SoxY 58 168 5.5E-35 T 13-10-2018 IPR032711 Ig-like SoxY domain Atc_2366 854869b6142e47526bbba6076950fd2a 170 Gene3D G3DSA:2.60.40.2470 39 170 3.7E-40 T 13-10-2018 IPR038162 Ig-like SoxY domain superfamily Atc_0079 d1aa9be6eddcffb761caa569a1b0a12e 502 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 171 4.4E-29 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_0079 d1aa9be6eddcffb761caa569a1b0a12e 502 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 27 487 3.4E-170 T 13-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_0079 d1aa9be6eddcffb761caa569a1b0a12e 502 SUPERFAMILY SSF56322 15 492 4.19E-159 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Atc_0079 d1aa9be6eddcffb761caa569a1b0a12e 502 Pfam PF00425 chorismate binding enzyme 225 479 3.8E-100 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Atc_0079 d1aa9be6eddcffb761caa569a1b0a12e 502 Gene3D G3DSA:3.60.120.10 1 496 2.2E-182 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Atc_0079 d1aa9be6eddcffb761caa569a1b0a12e 502 PRINTS PR00095 Anthranilate synthase component I signature 341 354 1.5E-23 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_0079 d1aa9be6eddcffb761caa569a1b0a12e 502 PRINTS PR00095 Anthranilate synthase component I signature 327 340 1.5E-23 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_0079 d1aa9be6eddcffb761caa569a1b0a12e 502 PRINTS PR00095 Anthranilate synthase component I signature 421 435 1.5E-23 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_0079 d1aa9be6eddcffb761caa569a1b0a12e 502 PRINTS PR00095 Anthranilate synthase component I signature 436 450 1.5E-23 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_0928 c3d094d2d254a54dff8cbd11ba7314c2 818 Pfam PF12288 Carboxysome shell peptide mid-region 360 466 6.4E-38 T 13-10-2018 IPR020990 Carboxysome shell protein Atc_0928 c3d094d2d254a54dff8cbd11ba7314c2 818 Pfam PF12288 Carboxysome shell peptide mid-region 473 598 2.2E-23 T 13-10-2018 IPR020990 Carboxysome shell protein Atc_0928 c3d094d2d254a54dff8cbd11ba7314c2 818 Pfam PF12288 Carboxysome shell peptide mid-region 112 352 7.0E-68 T 13-10-2018 IPR020990 Carboxysome shell protein Atc_1471 c5028def7de5301add4d79fed3d1ccd8 433 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 433 5.1E-79 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Atc_1471 c5028def7de5301add4d79fed3d1ccd8 433 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 2.0E-16 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atc_1471 c5028def7de5301add4d79fed3d1ccd8 433 Gene3D G3DSA:1.20.1330.10 40 229 3.4E-39 T 13-10-2018 Atc_1471 c5028def7de5301add4d79fed3d1ccd8 433 Gene3D G3DSA:1.20.1330.10 263 380 4.2E-5 T 13-10-2018 Atc_1471 c5028def7de5301add4d79fed3d1ccd8 433 SUPERFAMILY SSF64518 1 433 2.35E-64 T 13-10-2018 Atc_m214 9cfb7e5296b6c30ca20865dac75e6107 200 Pfam PF01618 MotA/TolQ/ExbB proton channel family 75 175 2.2E-20 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atc_0728 16db1e3a655d23cf93d9aa65e198cc4d 658 SUPERFAMILY SSF52540 45 350 2.11E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0728 16db1e3a655d23cf93d9aa65e198cc4d 658 Pfam PF00350 Dynamin family 59 275 1.1E-12 T 13-10-2018 IPR022812 Dynamin superfamily Atc_1442 722afddb43f153dfb399740399fef2d8 331 Gene3D G3DSA:3.20.20.100 6 327 7.4E-117 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atc_1442 722afddb43f153dfb399740399fef2d8 331 Pfam PF00248 Aldo/keto reductase family 14 308 6.3E-69 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atc_1442 722afddb43f153dfb399740399fef2d8 331 PRINTS PR00069 Aldo-keto reductase signature 108 126 6.9E-12 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atc_1442 722afddb43f153dfb399740399fef2d8 331 PRINTS PR00069 Aldo-keto reductase signature 42 66 6.9E-12 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atc_1442 722afddb43f153dfb399740399fef2d8 331 PRINTS PR00069 Aldo-keto reductase signature 139 156 6.9E-12 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atc_1442 722afddb43f153dfb399740399fef2d8 331 SUPERFAMILY SSF51430 10 317 8.12E-93 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atc_0324 606874504650d44e9fc8e2b2be30f4ab 326 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 6 323 30.686 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Atc_0324 606874504650d44e9fc8e2b2be30f4ab 326 SUPERFAMILY SSF52540 52 180 1.01E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0324 606874504650d44e9fc8e2b2be30f4ab 326 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 47 302 1.2E-50 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Atc_0324 606874504650d44e9fc8e2b2be30f4ab 326 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 321 9.1E-76 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Atc_2760 098c3c811a352ed0e83b52f293c5ff9d 306 PIRSF PIRSF005917 2 286 2.6E-95 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Atc_2760 098c3c811a352ed0e83b52f293c5ff9d 306 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 36.35 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Atc_2760 098c3c811a352ed0e83b52f293c5ff9d 306 Gene3D G3DSA:3.30.950.10 121 240 8.8E-42 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Atc_2760 098c3c811a352ed0e83b52f293c5ff9d 306 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 13-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Atc_2760 098c3c811a352ed0e83b52f293c5ff9d 306 SUPERFAMILY SSF53790 12 232 2.62E-76 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Atc_2760 098c3c811a352ed0e83b52f293c5ff9d 306 Gene3D G3DSA:3.40.1010.10 2 120 3.4E-39 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Atc_2760 098c3c811a352ed0e83b52f293c5ff9d 306 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 1.2E-31 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Atc_2760 098c3c811a352ed0e83b52f293c5ff9d 306 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 281 1.5E-76 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Atc_2434 94462c35e65bd36084ad9cf1b6bf866b 249 SUPERFAMILY SSF48452 39 126 1.37E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2434 94462c35e65bd36084ad9cf1b6bf866b 249 Gene3D G3DSA:1.25.40.10 38 248 1.2E-50 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2434 94462c35e65bd36084ad9cf1b6bf866b 249 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 5 239 32.101 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD Atc_2434 94462c35e65bd36084ad9cf1b6bf866b 249 Pfam PF13525 Outer membrane lipoprotein 38 231 1.2E-52 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Atc_2434 94462c35e65bd36084ad9cf1b6bf866b 249 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 244 2.0E-76 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD Atc_2512 21c15ca38118087bf820bf4a74fa5a52 254 Pfam PF07103 Protein of unknown function (DUF1365) 12 246 7.1E-58 T 13-10-2018 IPR010775 Protein of unknown function DUF1365 Atc_0089 37bc071ed1f4dd6187cc7ac35510d3c4 259 PIRSF PIRSF006648 2 258 2.4E-28 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atc_0089 37bc071ed1f4dd6187cc7ac35510d3c4 259 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 14 257 1.0E-71 T 13-10-2018 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 Atc_0089 37bc071ed1f4dd6187cc7ac35510d3c4 259 Pfam PF01061 ABC-2 type transporter 13 220 3.9E-24 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Atc_0089 37bc071ed1f4dd6187cc7ac35510d3c4 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 32 53 1.8E-38 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atc_0089 37bc071ed1f4dd6187cc7ac35510d3c4 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 144 168 1.8E-38 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atc_0089 37bc071ed1f4dd6187cc7ac35510d3c4 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 181 200 1.8E-38 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atc_0089 37bc071ed1f4dd6187cc7ac35510d3c4 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 62 84 1.8E-38 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atc_0089 37bc071ed1f4dd6187cc7ac35510d3c4 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 107 132 1.8E-38 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atc_0089 37bc071ed1f4dd6187cc7ac35510d3c4 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 201 220 1.8E-38 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atc_2348 75bffb7b09c66872322b1d085f13d3a9 239 Gene3D G3DSA:1.10.1060.10 29 139 6.4E-9 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atc_2348 75bffb7b09c66872322b1d085f13d3a9 239 Pfam PF13534 4Fe-4S dicluster domain 62 123 1.0E-9 T 13-10-2018 Atc_2348 75bffb7b09c66872322b1d085f13d3a9 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 109 120 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atc_2348 75bffb7b09c66872322b1d085f13d3a9 239 SUPERFAMILY SSF46548 31 134 3.66E-17 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atc_1755 cfbe0978730a01f791f27653f9cc3ff4 249 SUPERFAMILY SSF69572 4 240 6.8E-53 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Atc_1755 cfbe0978730a01f791f27653f9cc3ff4 249 Gene3D G3DSA:3.40.50.720 1 245 1.4E-69 T 13-10-2018 Atc_1755 cfbe0978730a01f791f27653f9cc3ff4 249 Pfam PF00899 ThiF family 9 173 8.2E-33 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Atc_0300 8e08ce495bf5ca551d465c54a4f9c00d 268 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 1.1E-11 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Atc_0300 8e08ce495bf5ca551d465c54a4f9c00d 268 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 138 223 3.5E-15 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Atc_0300 8e08ce495bf5ca551d465c54a4f9c00d 268 Gene3D G3DSA:3.20.190.10 1 129 6.0E-12 T 13-10-2018 IPR035937 MutM-like, N-terminal Atc_0300 8e08ce495bf5ca551d465c54a4f9c00d 268 SMART SM01232 138 228 4.0E-17 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Atc_0300 8e08ce495bf5ca551d465c54a4f9c00d 268 SUPERFAMILY SSF81624 3 143 8.11E-14 T 13-10-2018 IPR035937 MutM-like, N-terminal Atc_0300 8e08ce495bf5ca551d465c54a4f9c00d 268 SMART SM00898 3 123 1.3E-4 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Atc_0300 8e08ce495bf5ca551d465c54a4f9c00d 268 SUPERFAMILY SSF46946 137 221 2.49E-17 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Atc_0300 8e08ce495bf5ca551d465c54a4f9c00d 268 Gene3D G3DSA:1.10.8.50 138 268 1.2E-29 T 13-10-2018 Atc_0300 8e08ce495bf5ca551d465c54a4f9c00d 268 Pfam PF06827 Zinc finger found in FPG and IleRS 243 268 1.8E-5 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Atc_0300 8e08ce495bf5ca551d465c54a4f9c00d 268 ProSitePatterns PS01242 Zinc finger FPG-type signature. 243 267 - T 13-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Atc_0300 8e08ce495bf5ca551d465c54a4f9c00d 268 SUPERFAMILY SSF57716 228 267 9.41E-8 T 13-10-2018 Atc_1572 a0f74a57cbac2ced2b5629406039417a 355 SUPERFAMILY SSF53098 9 132 4.8E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1572 a0f74a57cbac2ced2b5629406039417a 355 Pfam PF00665 Integrase core domain 3 108 1.7E-14 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_0191 772f2cddc3a7339be3ee9b937ee86552 254 SUPERFAMILY SSF141371 135 214 1.33E-6 T 13-10-2018 Atc_0191 772f2cddc3a7339be3ee9b937ee86552 254 Pfam PF07238 PilZ domain 134 233 5.1E-6 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Atc_m117 6c15c7b02b3a2c52872842e5c162cb59 151 Gene3D G3DSA:3.10.350.10 100 150 5.9E-17 T 13-10-2018 IPR036779 LysM domain superfamily Atc_m117 6c15c7b02b3a2c52872842e5c162cb59 151 SMART SM00257 101 145 4.9E-15 T 13-10-2018 IPR018392 LysM domain Atc_m117 6c15c7b02b3a2c52872842e5c162cb59 151 Pfam PF01476 LysM domain 103 144 1.4E-14 T 13-10-2018 IPR018392 LysM domain Atc_m117 6c15c7b02b3a2c52872842e5c162cb59 151 SUPERFAMILY SSF54106 103 144 7.59E-11 T 13-10-2018 Atc_1385 227d66a5e0ba8ff03217c4f17bd9f39c 933 SUPERFAMILY SSF53649 559 849 1.31E-11 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Atc_1385 227d66a5e0ba8ff03217c4f17bd9f39c 933 Gene3D G3DSA:2.130.10.10 286 437 2.6E-17 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_1385 227d66a5e0ba8ff03217c4f17bd9f39c 933 Gene3D G3DSA:2.130.10.10 62 252 4.8E-9 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_1385 227d66a5e0ba8ff03217c4f17bd9f39c 933 SUPERFAMILY SSF51004 76 349 4.45E-21 T 13-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Atc_1385 227d66a5e0ba8ff03217c4f17bd9f39c 933 Pfam PF04185 Phosphoesterase family 560 829 8.9E-9 T 13-10-2018 IPR007312 Phosphoesterase GO:0016788 Atc_1385 227d66a5e0ba8ff03217c4f17bd9f39c 933 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 322 349 2.4E-7 T 13-10-2018 IPR011964 YVTN beta-propeller repeat Atc_1385 227d66a5e0ba8ff03217c4f17bd9f39c 933 Gene3D G3DSA:3.40.720.10 736 863 5.5E-9 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atc_m065 1f4a5347032ab8cc5f4d96e7984cd7fb 469 Pfam PF02321 Outer membrane efflux protein 270 441 1.3E-14 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_m065 1f4a5347032ab8cc5f4d96e7984cd7fb 469 Pfam PF02321 Outer membrane efflux protein 69 240 5.2E-20 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_m065 1f4a5347032ab8cc5f4d96e7984cd7fb 469 SUPERFAMILY SSF56954 2 443 1.83E-56 T 13-10-2018 Atc_m065 1f4a5347032ab8cc5f4d96e7984cd7fb 469 Gene3D G3DSA:1.20.1600.10 45 449 1.1E-50 T 13-10-2018 Atc_1315 393652cc66cd9e2185193708464e06d5 116 Gene3D G3DSA:3.30.110.70 7 113 2.4E-26 T 13-10-2018 Atc_1315 393652cc66cd9e2185193708464e06d5 116 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 5 111 20.874 T 13-10-2018 IPR002765 Uncharacterised protein family UPF0145 Atc_1315 393652cc66cd9e2185193708464e06d5 116 Pfam PF01906 Putative heavy-metal-binding 5 111 4.9E-31 T 13-10-2018 IPR002765 Uncharacterised protein family UPF0145 Atc_1315 393652cc66cd9e2185193708464e06d5 116 SUPERFAMILY SSF117782 6 113 5.89E-29 T 13-10-2018 IPR035439 UPF0145 domain superfamily Atc_1769 4260e7a24c694de3dbf3dc875f49019c 138 Gene3D G3DSA:2.60.120.460 2 134 3.9E-37 T 13-10-2018 IPR035917 YjbQ-like superfamily Atc_1769 4260e7a24c694de3dbf3dc875f49019c 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 95 113 - T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Atc_1769 4260e7a24c694de3dbf3dc875f49019c 138 Pfam PF01894 Uncharacterised protein family UPF0047 18 129 7.9E-36 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Atc_1769 4260e7a24c694de3dbf3dc875f49019c 138 PIRSF PIRSF004681 1 134 3.7E-44 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Atc_1769 4260e7a24c694de3dbf3dc875f49019c 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 6 133 3.8E-36 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Atc_1769 4260e7a24c694de3dbf3dc875f49019c 138 SUPERFAMILY SSF111038 3 133 4.06E-41 T 13-10-2018 IPR035917 YjbQ-like superfamily Atc_0863 74ae7ed997bedb19c9bedc98ba5e84c7 739 PIRSF PIRSF001227 30 737 1.4E-82 T 13-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 Atc_0863 74ae7ed997bedb19c9bedc98ba5e84c7 739 Gene3D G3DSA:1.10.1400.10 511 623 2.2E-75 T 13-10-2018 Atc_0863 74ae7ed997bedb19c9bedc98ba5e84c7 739 SUPERFAMILY SSF56235 33 736 3.09E-112 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_0863 74ae7ed997bedb19c9bedc98ba5e84c7 739 Gene3D G3DSA:2.30.120.10 291 349 2.2E-75 T 13-10-2018 Atc_0863 74ae7ed997bedb19c9bedc98ba5e84c7 739 Gene3D G3DSA:3.60.20.10 221 714 2.2E-75 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_0863 74ae7ed997bedb19c9bedc98ba5e84c7 739 Pfam PF01804 Penicillin amidase 34 726 1.6E-134 T 13-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 Atc_0863 74ae7ed997bedb19c9bedc98ba5e84c7 739 Gene3D G3DSA:1.10.439.10 23 166 2.5E-33 T 13-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 Atc_1777 13372df651773667451dfc68f855f6c3 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 3.5E-120 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Atc_1777 13372df651773667451dfc68f855f6c3 361 PIRSF PIRSF001455 6 359 4.4E-112 T 13-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Atc_1777 13372df651773667451dfc68f855f6c3 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 72.337 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Atc_1777 13372df651773667451dfc68f855f6c3 361 Gene3D G3DSA:3.40.50.1970 1 172 1.2E-63 T 13-10-2018 Atc_1777 13372df651773667451dfc68f855f6c3 361 SUPERFAMILY SSF56796 4 355 4.45E-115 T 13-10-2018 Atc_1777 13372df651773667451dfc68f855f6c3 361 Gene3D G3DSA:1.20.1090.10 173 360 1.9E-70 T 13-10-2018 Atc_1777 13372df651773667451dfc68f855f6c3 361 Pfam PF01761 3-dehydroquinate synthase 67 324 1.5E-108 T 13-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Atc_2761 4af355cf610234be9e3698a885cf88af 598 SUPERFAMILY SSF48452 39 249 2.13E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_2761 4af355cf610234be9e3698a885cf88af 598 SUPERFAMILY SSF53822 271 587 5.38E-44 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Atc_2761 4af355cf610234be9e3698a885cf88af 598 Pfam PF04348 LppC putative lipoprotein 55 583 6.8E-48 T 13-10-2018 IPR007443 Penicillin-binding protein activator LpoA Atc_2761 4af355cf610234be9e3698a885cf88af 598 Gene3D G3DSA:3.40.50.2300 374 579 3.5E-33 T 13-10-2018 Atc_2761 4af355cf610234be9e3698a885cf88af 598 Gene3D G3DSA:3.40.50.2300 274 578 3.5E-33 T 13-10-2018 Atc_2761 4af355cf610234be9e3698a885cf88af 598 Gene3D G3DSA:1.25.40.650 166 257 1.9E-7 T 13-10-2018 Atc_1060 91e57b20816dd19c72e2ce27c83c1f5e 78 Pfam PF02411 MerT mercuric transport protein 2 73 2.3E-7 T 13-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 Atc_1379 307a3e843a773f042dc72c5d195a0ccc 340 Pfam PF05598 Transposase domain (DUF772) 58 130 5.7E-21 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1379 307a3e843a773f042dc72c5d195a0ccc 340 Pfam PF01609 Transposase DDE domain 145 332 1.6E-29 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1757 af7471132d1f79a19fec339ccfb05ebc 435 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 317 330 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Atc_1757 af7471132d1f79a19fec339ccfb05ebc 435 SUPERFAMILY SSF51905 27 404 2.72E-30 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1757 af7471132d1f79a19fec339ccfb05ebc 435 Pfam PF01494 FAD binding domain 173 346 4.4E-10 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 Atc_1757 af7471132d1f79a19fec339ccfb05ebc 435 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 27 412 6.2E-77 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Atc_1757 af7471132d1f79a19fec339ccfb05ebc 435 Gene3D G3DSA:3.30.9.50 99 292 2.7E-61 T 13-10-2018 Atc_1757 af7471132d1f79a19fec339ccfb05ebc 435 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 318 334 6.3E-12 T 13-10-2018 Atc_1757 af7471132d1f79a19fec339ccfb05ebc 435 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 318 6.3E-12 T 13-10-2018 Atc_1757 af7471132d1f79a19fec339ccfb05ebc 435 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 27 49 6.3E-12 T 13-10-2018 Atc_1757 af7471132d1f79a19fec339ccfb05ebc 435 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 176 191 6.3E-12 T 13-10-2018 Atc_1757 af7471132d1f79a19fec339ccfb05ebc 435 Gene3D G3DSA:3.50.50.60 28 361 2.7E-61 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2820 e9cdb9b28281853e5f38f36c1d19100d 296 Gene3D G3DSA:3.30.1330.60 183 282 5.3E-5 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_2820 e9cdb9b28281853e5f38f36c1d19100d 296 SUPERFAMILY SSF103088 195 276 8.24E-5 T 13-10-2018 IPR036737 OmpA-like domain superfamily Atc_0008 5d4d3f185c3f3c56437358766fdc1ec9 231 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 10 230 23.72 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Atc_0008 5d4d3f185c3f3c56437358766fdc1ec9 231 Gene3D G3DSA:2.160.20.70 124 231 4.0E-30 T 13-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Atc_0008 5d4d3f185c3f3c56437358766fdc1ec9 231 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 15 229 3.8E-48 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Atc_0008 5d4d3f185c3f3c56437358766fdc1ec9 231 Gene3D G3DSA:3.30.750.120 5 121 2.5E-10 T 13-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily Atc_0008 5d4d3f185c3f3c56437358766fdc1ec9 231 SUPERFAMILY SSF63848 126 229 5.36E-29 T 13-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Atc_0008 5d4d3f185c3f3c56437358766fdc1ec9 231 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 128 226 8.2E-30 T 13-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Atc_0008 5d4d3f185c3f3c56437358766fdc1ec9 231 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 12 105 3.3E-6 T 13-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 Atc_2350 4e726d2b83e0f5e2c67026c1f5752d4b 351 SUPERFAMILY SSF51905 7 342 1.81E-23 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2350 4e726d2b83e0f5e2c67026c1f5752d4b 351 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.6E-8 T 13-10-2018 Atc_2350 4e726d2b83e0f5e2c67026c1f5752d4b 351 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 4.6E-8 T 13-10-2018 Atc_2350 4e726d2b83e0f5e2c67026c1f5752d4b 351 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 4.6E-8 T 13-10-2018 Atc_2350 4e726d2b83e0f5e2c67026c1f5752d4b 351 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 332 4.9E-19 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_2350 4e726d2b83e0f5e2c67026c1f5752d4b 351 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 1.2E-5 T 13-10-2018 Atc_2350 4e726d2b83e0f5e2c67026c1f5752d4b 351 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.2E-5 T 13-10-2018 Atc_2350 4e726d2b83e0f5e2c67026c1f5752d4b 351 Gene3D G3DSA:3.50.50.60 4 145 4.2E-14 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2350 4e726d2b83e0f5e2c67026c1f5752d4b 351 Gene3D G3DSA:3.50.50.60 197 343 3.3E-6 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_0429 538aebf72a3b636a3e56d3504387a1f5 394 SMART SM00974 279 373 4.5E-17 T 13-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding Atc_0429 538aebf72a3b636a3e56d3504387a1f5 394 Pfam PF10544 T5orf172 domain 263 373 1.6E-11 T 13-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding Atc_0686 78a9339512264e1fa798e02682a587d2 172 Pfam PF12092 Protein of unknown function (DUF3568) 13 129 3.9E-18 T 13-10-2018 IPR021952 Protein of unknown function DUF3568 Atc_1991 749d1383cccd0d7e003fb29316fa8284 1224 Gene3D G3DSA:1.10.530.10 648 787 5.8E-18 T 13-10-2018 Atc_1361 a04a455f6e5baf20732889ce1b43827e 489 Gene3D G3DSA:1.20.1600.10 62 476 3.9E-93 T 13-10-2018 Atc_1361 a04a455f6e5baf20732889ce1b43827e 489 SUPERFAMILY SSF56954 11 476 1.83E-74 T 13-10-2018 Atc_1361 a04a455f6e5baf20732889ce1b43827e 489 Gene3D G3DSA:2.20.200.10 109 364 3.9E-93 T 13-10-2018 Atc_1361 a04a455f6e5baf20732889ce1b43827e 489 Pfam PF02321 Outer membrane efflux protein 72 263 4.0E-19 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1361 a04a455f6e5baf20732889ce1b43827e 489 Pfam PF02321 Outer membrane efflux protein 297 473 1.1E-16 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1361 a04a455f6e5baf20732889ce1b43827e 489 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 21 475 2.5E-90 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Atc_1917 b622cd5aebb3d8d6afb82c4ca562f617 233 Pfam PF00872 Transposase, Mutator family 2 175 2.7E-41 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Atc_1754 bbaf15f604898a567ef283409a587adf 130 SUPERFAMILY SSF55718 1 129 4.47E-34 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Atc_1754 bbaf15f604898a567ef283409a587adf 130 Pfam PF02036 SCP-2 sterol transfer family 16 114 7.2E-16 T 13-10-2018 IPR003033 SCP2 sterol-binding domain Atc_1754 bbaf15f604898a567ef283409a587adf 130 Gene3D G3DSA:3.30.1050.10 3 124 2.2E-25 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Atc_0194 c9fb62f4a61d222079fa6c8ccffdb52c 161 SUPERFAMILY SSF75708 21 160 1.19E-20 T 13-10-2018 Atc_1776 695b7a3987555f316f2c4c67f2a2a607 182 Pfam PF01202 Shikimate kinase 11 166 4.0E-46 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Atc_1776 695b7a3987555f316f2c4c67f2a2a607 182 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 27.429 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Atc_1776 695b7a3987555f316f2c4c67f2a2a607 182 ProSitePatterns PS01128 Shikimate kinase signature. 58 84 - T 13-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Atc_1776 695b7a3987555f316f2c4c67f2a2a607 182 SUPERFAMILY SSF52540 4 166 5.24E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1776 695b7a3987555f316f2c4c67f2a2a607 182 PRINTS PR01100 Shikimate kinase family signature 76 85 2.4E-24 T 13-10-2018 Atc_1776 695b7a3987555f316f2c4c67f2a2a607 182 PRINTS PR01100 Shikimate kinase family signature 5 20 2.4E-24 T 13-10-2018 Atc_1776 695b7a3987555f316f2c4c67f2a2a607 182 PRINTS PR01100 Shikimate kinase family signature 97 114 2.4E-24 T 13-10-2018 Atc_1776 695b7a3987555f316f2c4c67f2a2a607 182 PRINTS PR01100 Shikimate kinase family signature 57 65 2.4E-24 T 13-10-2018 Atc_1776 695b7a3987555f316f2c4c67f2a2a607 182 PRINTS PR01100 Shikimate kinase family signature 29 42 2.4E-24 T 13-10-2018 Atc_1776 695b7a3987555f316f2c4c67f2a2a607 182 Gene3D G3DSA:3.40.50.300 1 176 1.3E-53 T 13-10-2018 Atc_0389 997b96a383f4fe6a57df737386b0646d 112 Gene3D G3DSA:3.30.70.2340 1 97 1.4E-27 T 13-10-2018 Atc_0389 997b96a383f4fe6a57df737386b0646d 112 Pfam PF12112 Protein of unknown function (DUF3579) 2 84 1.6E-23 T 13-10-2018 IPR021969 Protein of unknown function DUF3579 Atc_m024 580fae24c3426d9260ffaf85fb598292 360 Gene3D G3DSA:3.30.1330.180 104 243 6.6E-35 T 13-10-2018 Atc_m024 580fae24c3426d9260ffaf85fb598292 360 TIGRFAM TIGR02714 amido_AtzD_TrzD: ring-opening amidohydrolases 4 359 1.8E-97 T 13-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 Atc_m024 580fae24c3426d9260ffaf85fb598292 360 Gene3D G3DSA:3.30.1330.160 244 360 9.7E-37 T 13-10-2018 Atc_m024 580fae24c3426d9260ffaf85fb598292 360 Pfam PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) 4 358 1.2E-136 T 13-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 Atc_m024 580fae24c3426d9260ffaf85fb598292 360 Gene3D G3DSA:3.30.1330.170 1 103 5.6E-33 T 13-10-2018 Atc_m024 580fae24c3426d9260ffaf85fb598292 360 Hamap MF_01989 Cyanuric acid amidohydrolase. 1 359 33.192 T 13-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 Atc_0433 72d69099d41077d2a41d04d70a08363f 70 SUPERFAMILY SSF89447 3 47 4.36E-8 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Atc_0433 72d69099d41077d2a41d04d70a08363f 70 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 5 45 4.4E-9 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atc_0433 72d69099d41077d2a41d04d70a08363f 70 SMART SM00966 5 50 6.1E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atc_0433 72d69099d41077d2a41d04d70a08363f 70 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 47 8.7E-8 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atc_0433 72d69099d41077d2a41d04d70a08363f 70 Gene3D G3DSA:2.10.260.10 1 43 2.1E-6 T 13-10-2018 Atc_1062 eedb73fafe05f8da2ccfad451a03bcbb 520 Pfam PF03050 Transposase IS66 family 175 455 8.1E-87 T 13-10-2018 IPR004291 Transposase, IS66 Atc_1062 eedb73fafe05f8da2ccfad451a03bcbb 520 Pfam PF13007 Transposase C of IS166 homeodomain 32 92 4.2E-11 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain Atc_1062 eedb73fafe05f8da2ccfad451a03bcbb 520 Pfam PF13817 IS66 C-terminal element 462 498 1.8E-11 T 13-10-2018 IPR039552 Transposase IS66, C-terminal Atc_1571 ef6869eef02bb71979a6ce51ab5adaee 141 Pfam PF02796 Helix-turn-helix domain of resolvase 2 38 2.5E-5 T 13-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 Atc_1014 c4d09146fdc111f2c55885a823ade424 314 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 313 71.331 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Atc_1014 c4d09146fdc111f2c55885a823ade424 314 Gene3D G3DSA:3.40.47.10 2 314 2.4E-128 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Atc_1014 c4d09146fdc111f2c55885a823ade424 314 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 186 1.6E-33 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Atc_1014 c4d09146fdc111f2c55885a823ade424 314 SUPERFAMILY SSF53901 4 313 4.44E-72 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Atc_1014 c4d09146fdc111f2c55885a823ade424 314 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 313 6.8E-130 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Atc_1014 c4d09146fdc111f2c55885a823ade424 314 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 226 313 3.8E-35 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Atc_1667 3c988d19903b1e6852c8fbf9b61ab822 221 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 17 191 3.0E-39 T 13-10-2018 Atc_2018 e37b1dd336cc68547caafe53f2a8bf29 744 Gene3D G3DSA:1.10.3210.40 77 299 1.1E-20 T 13-10-2018 Atc_2018 e37b1dd336cc68547caafe53f2a8bf29 744 Pfam PF07514 Putative helicase 85 407 2.2E-63 T 13-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative Atc_2332 32f4885ed68e8a5a802aa87c90825323 831 SMART SM00327 636 828 1.3E-7 T 13-10-2018 IPR002035 von Willebrand factor, type A Atc_2332 32f4885ed68e8a5a802aa87c90825323 831 SUPERFAMILY SSF53300 637 824 2.97E-16 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atc_2332 32f4885ed68e8a5a802aa87c90825323 831 Gene3D G3DSA:3.40.50.410 629 820 1.0E-13 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atc_1973 785ade604145ee98c61d8d1429454e41 613 SUPERFAMILY SSF52833 502 612 4.55E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1973 785ade604145ee98c61d8d1429454e41 613 SUPERFAMILY SSF74863 35 153 3.01E-24 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Atc_1973 785ade604145ee98c61d8d1429454e41 613 Gene3D G3DSA:3.40.30.10 493 613 2.1E-25 T 13-10-2018 Atc_1973 785ade604145ee98c61d8d1429454e41 613 Pfam PF11412 Disulphide bond corrector protein DsbC 36 153 3.4E-27 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Atc_1973 785ade604145ee98c61d8d1429454e41 613 Pfam PF13098 Thioredoxin-like domain 517 611 3.5E-8 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_1973 785ade604145ee98c61d8d1429454e41 613 Gene3D G3DSA:2.60.40.1250 29 169 8.0E-33 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Atc_1973 785ade604145ee98c61d8d1429454e41 613 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 206 408 3.3E-18 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Atc_0557 128f6c1b852a88a1dcb26d4660396e8d 221 Gene3D G3DSA:1.20.1050.10 104 220 9.0E-7 T 13-10-2018 Atc_0557 128f6c1b852a88a1dcb26d4660396e8d 221 SUPERFAMILY SSF47616 90 217 9.52E-8 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atc_0557 128f6c1b852a88a1dcb26d4660396e8d 221 SUPERFAMILY SSF52833 1 78 4.57E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0557 128f6c1b852a88a1dcb26d4660396e8d 221 Gene3D G3DSA:3.40.30.10 1 103 1.1E-17 T 13-10-2018 Atc_0557 128f6c1b852a88a1dcb26d4660396e8d 221 Pfam PF04399 Glutaredoxin 2, C terminal domain 93 218 1.0E-23 T 13-10-2018 IPR007494 Glutaredoxin 2, C-terminal Atc_0557 128f6c1b852a88a1dcb26d4660396e8d 221 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 3.4E-13 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atc_1896 128f6c1b852a88a1dcb26d4660396e8d 221 Gene3D G3DSA:1.20.1050.10 104 220 9.0E-7 T 13-10-2018 Atc_1896 128f6c1b852a88a1dcb26d4660396e8d 221 SUPERFAMILY SSF47616 90 217 9.52E-8 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atc_1896 128f6c1b852a88a1dcb26d4660396e8d 221 SUPERFAMILY SSF52833 1 78 4.57E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1896 128f6c1b852a88a1dcb26d4660396e8d 221 Gene3D G3DSA:3.40.30.10 1 103 1.1E-17 T 13-10-2018 Atc_1896 128f6c1b852a88a1dcb26d4660396e8d 221 Pfam PF04399 Glutaredoxin 2, C terminal domain 93 218 1.0E-23 T 13-10-2018 IPR007494 Glutaredoxin 2, C-terminal Atc_1896 128f6c1b852a88a1dcb26d4660396e8d 221 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 3.4E-13 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atc_0538 c33ac868f571adec338f1ea8177b7837 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 7 481 20.377 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Atc_0538 c33ac868f571adec338f1ea8177b7837 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 60 444 5.3E-89 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Atc_0538 c33ac868f571adec338f1ea8177b7837 506 Pfam PF00795 Carbon-nitrogen hydrolase 224 449 4.0E-25 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atc_0538 c33ac868f571adec338f1ea8177b7837 506 Gene3D G3DSA:3.60.110.10 212 454 1.0E-19 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_0538 c33ac868f571adec338f1ea8177b7837 506 SUPERFAMILY SSF56317 213 475 1.44E-40 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_0295 bdc8d14d890bd5e6ba9555878d3f1cb4 142 Pfam PF03640 Secreted repeat of unknown function 37 77 1.1E-11 T 13-10-2018 IPR005297 Lipoprotein repeat Atc_0295 bdc8d14d890bd5e6ba9555878d3f1cb4 142 Pfam PF03640 Secreted repeat of unknown function 92 134 1.6E-16 T 13-10-2018 IPR005297 Lipoprotein repeat Atc_0304 00cd70f74b15fa44baf0ad51e28c8a2d 175 Pfam PF13511 Domain of unknown function (DUF4124) 23 77 4.0E-10 T 13-10-2018 IPR025392 Domain of unknown function DUF4124 Atc_m168 122fecc3db50710eb1bf70f283ebbebb 1317 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 795 807 1.5E-16 T 13-10-2018 Atc_m168 122fecc3db50710eb1bf70f283ebbebb 1317 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 877 901 1.5E-16 T 13-10-2018 Atc_m168 122fecc3db50710eb1bf70f283ebbebb 1317 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 515 529 1.5E-16 T 13-10-2018 Atc_m168 122fecc3db50710eb1bf70f283ebbebb 1317 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 474 490 1.5E-16 T 13-10-2018 Atc_m168 122fecc3db50710eb1bf70f283ebbebb 1317 Pfam PF02384 N-6 DNA Methylase 469 587 1.9E-6 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Atc_m168 122fecc3db50710eb1bf70f283ebbebb 1317 SUPERFAMILY SSF53335 296 1010 4.71E-58 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_m168 122fecc3db50710eb1bf70f283ebbebb 1317 Gene3D G3DSA:3.40.50.150 431 633 2.1E-24 T 13-10-2018 Atc_2040 fd6a38eee8432f5217dbe2d14cf6a306 256 Pfam PF01464 Transglycosylase SLT domain 94 216 9.3E-7 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_2040 fd6a38eee8432f5217dbe2d14cf6a306 256 Gene3D G3DSA:1.10.530.10 83 232 9.4E-7 T 13-10-2018 Atc_2040 fd6a38eee8432f5217dbe2d14cf6a306 256 SUPERFAMILY SSF53955 88 223 2.33E-16 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_1343 adc63cf59d46a697e0841bdfc6340f26 351 Pfam PF05598 Transposase domain (DUF772) 53 127 3.3E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1343 adc63cf59d46a697e0841bdfc6340f26 351 Pfam PF01609 Transposase DDE domain 170 342 5.7E-14 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1649 22c042b5108b0c5ff1b6df1cab1e1088 278 SUPERFAMILY SSF56529 54 269 1.15E-68 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atc_1649 22c042b5108b0c5ff1b6df1cab1e1088 278 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 60 266 3.3E-61 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Atc_1649 22c042b5108b0c5ff1b6df1cab1e1088 278 Gene3D G3DSA:3.90.850.10 56 274 4.6E-72 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atc_2501 acd232e87b0c855967b01e40e6a8c835 358 SUPERFAMILY SSF52540 95 340 3.55E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2501 acd232e87b0c855967b01e40e6a8c835 358 Gene3D G3DSA:3.40.50.300 78 335 5.4E-88 T 13-10-2018 Atc_2501 acd232e87b0c855967b01e40e6a8c835 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 88 336 39.364 T 13-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Atc_2501 acd232e87b0c855967b01e40e6a8c835 358 Pfam PF01883 Iron-sulfur cluster assembly protein 6 67 3.6E-6 T 13-10-2018 IPR002744 MIP18 family-like Atc_2501 acd232e87b0c855967b01e40e6a8c835 358 SUPERFAMILY SSF117916 2 70 6.54E-7 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Atc_2501 acd232e87b0c855967b01e40e6a8c835 358 ProSitePatterns PS01215 Mrp family signature. 199 215 - T 13-10-2018 IPR000808 Mrp, conserved site GO:0005524 Atc_2501 acd232e87b0c855967b01e40e6a8c835 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 93 334 2.6E-105 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Atc_m242 ede9384667438e0b5ed6a6f90f4892e7 375 Pfam PF00268 Ribonucleotide reductase, small chain 54 341 6.6E-82 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_m242 ede9384667438e0b5ed6a6f90f4892e7 375 SUPERFAMILY SSF47240 38 345 7.57E-94 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_m242 ede9384667438e0b5ed6a6f90f4892e7 375 Gene3D G3DSA:1.10.620.20 24 367 6.2E-112 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Atc_m242 ede9384667438e0b5ed6a6f90f4892e7 375 PIRSF PIRSF000355 24 375 2.0E-134 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_1955 c55f4f3d1e0f6849cfa01d7c5361e591 271 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 15 23 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Atc_1955 c55f4f3d1e0f6849cfa01d7c5361e591 271 Gene3D G3DSA:3.20.20.140 13 269 3.0E-89 T 13-10-2018 Atc_1955 c55f4f3d1e0f6849cfa01d7c5361e591 271 Pfam PF01026 TatD related DNase 16 264 1.8E-76 T 13-10-2018 IPR001130 TatD family GO:0016788 Atc_1955 c55f4f3d1e0f6849cfa01d7c5361e591 271 PIRSF PIRSF005902 4 268 2.9E-73 T 13-10-2018 IPR001130 TatD family GO:0016788 Atc_1955 c55f4f3d1e0f6849cfa01d7c5361e591 271 SUPERFAMILY SSF51556 15 265 7.67E-87 T 13-10-2018 IPR032466 Metal-dependent hydrolase Atc_1955 c55f4f3d1e0f6849cfa01d7c5361e591 271 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 201 217 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Atc_1955 c55f4f3d1e0f6849cfa01d7c5361e591 271 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 15 264 6.0E-80 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Atc_0854 7822a929460bad0d51eb4ab6c0db57a8 322 Gene3D G3DSA:3.30.360.10 119 301 3.1E-64 T 13-10-2018 Atc_0854 7822a929460bad0d51eb4ab6c0db57a8 322 SUPERFAMILY SSF55347 131 257 3.79E-12 T 13-10-2018 Atc_0854 7822a929460bad0d51eb4ab6c0db57a8 322 SUPERFAMILY SSF51735 3 141 6.92E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0854 7822a929460bad0d51eb4ab6c0db57a8 322 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 118 3.3E-27 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atc_0854 7822a929460bad0d51eb4ab6c0db57a8 322 Gene3D G3DSA:3.40.50.720 4 288 3.1E-64 T 13-10-2018 Atc_2p13 9c01c73ae49a1db8446aa5a2422b13df 56 Pfam PF11740 Plasmid replication region DNA-binding N-term 12 54 2.8E-6 T 13-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain Atc_0443 92fddda9b703f49587f4a9953099ddec 128 Pfam PF00380 Ribosomal protein S9/S16 8 128 7.6E-46 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Atc_0443 92fddda9b703f49587f4a9953099ddec 128 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 128 30.586 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Atc_0443 92fddda9b703f49587f4a9953099ddec 128 ProSitePatterns PS00360 Ribosomal protein S9 signature. 67 85 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Atc_0443 92fddda9b703f49587f4a9953099ddec 128 SUPERFAMILY SSF54211 3 128 2.09E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atc_0443 92fddda9b703f49587f4a9953099ddec 128 Gene3D G3DSA:3.30.230.10 1 128 3.1E-51 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atc_0157 049cf5c199aa5782be92aea3890aa969 219 PIRSF PIRSF010372 1 212 3.1E-67 T 13-10-2018 IPR007396 Transcriptional regulator PAI 2-type Atc_0157 049cf5c199aa5782be92aea3890aa969 219 Pfam PF04299 Putative FMN-binding domain 1 168 9.0E-62 T 13-10-2018 IPR007396 Transcriptional regulator PAI 2-type Atc_0157 049cf5c199aa5782be92aea3890aa969 219 Gene3D G3DSA:2.30.110.10 1 211 5.0E-69 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atc_0157 049cf5c199aa5782be92aea3890aa969 219 SUPERFAMILY SSF50475 9 194 7.85E-36 T 13-10-2018 Atc_0929 fa7523badb01d0178f06e1d175b90777 523 TIGRFAM TIGR02701 shell_carb_anhy: carboxysome shell carbonic anhydrase 62 509 2.4E-192 T 13-10-2018 IPR014074 Carboxysome shell carbonic anhydrase Atc_0929 fa7523badb01d0178f06e1d175b90777 523 Gene3D G3DSA:3.30.1330.140 407 522 1.1E-44 T 13-10-2018 Atc_0929 fa7523badb01d0178f06e1d175b90777 523 Pfam PF08936 Carboxysome Shell Carbonic Anhydrase 62 520 3.1E-202 T 13-10-2018 IPR014074 Carboxysome shell carbonic anhydrase Atc_0929 fa7523badb01d0178f06e1d175b90777 523 Gene3D G3DSA:1.20.120.1310 49 155 1.4E-33 T 13-10-2018 Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 SUPERFAMILY SSF52096 25 208 2.17E-72 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 Gene3D G3DSA:3.90.226.10 7 210 2.4E-83 T 13-10-2018 Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 PRINTS PR00127 Clp protease catalytic subunit P signature 126 145 3.2E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 PRINTS PR00127 Clp protease catalytic subunit P signature 74 94 3.2E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 PRINTS PR00127 Clp protease catalytic subunit P signature 105 122 3.2E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 PRINTS PR00127 Clp protease catalytic subunit P signature 34 49 3.2E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 PRINTS PR00127 Clp protease catalytic subunit P signature 183 202 3.2E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 Pfam PF00574 Clp protease 28 207 1.7E-86 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 18 207 3.7E-101 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 105 116 - T 13-10-2018 IPR018215 ClpP, Ser active site Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 18 208 43.953 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atc_1401 b8fa1955d8d371512cbafa7d48ee2d77 214 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 127 140 - T 13-10-2018 IPR033135 ClpP, histidine active site Atc_1375 694ba9f17afee94d44b8324482d6102b 161 SMART SM00855 2 115 9.1E-8 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atc_1375 694ba9f17afee94d44b8324482d6102b 161 SUPERFAMILY SSF53254 1 138 1.52E-18 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Atc_1375 694ba9f17afee94d44b8324482d6102b 161 Gene3D G3DSA:3.40.50.1240 2 159 1.3E-28 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Atc_1375 694ba9f17afee94d44b8324482d6102b 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 92 7.1E-13 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atc_1375 694ba9f17afee94d44b8324482d6102b 161 PIRSF PIRSF000709 1 92 0.0056 T 13-10-2018 Atc_2530 265568c098460150b2fc9e65227f18f6 945 Pfam PF02867 Ribonucleotide reductase, barrel domain 355 905 2.7E-179 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2530 265568c098460150b2fc9e65227f18f6 945 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 278 349 1.4E-19 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2530 265568c098460150b2fc9e65227f18f6 945 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 281 908 9.9E-210 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2530 265568c098460150b2fc9e65227f18f6 945 Gene3D G3DSA:3.20.70.20 209 915 6.3E-243 T 13-10-2018 Atc_2530 265568c098460150b2fc9e65227f18f6 945 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 750 771 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2530 265568c098460150b2fc9e65227f18f6 945 PRINTS PR01183 Ribonucleotide reductase large chain signature 685 708 6.3E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2530 265568c098460150b2fc9e65227f18f6 945 PRINTS PR01183 Ribonucleotide reductase large chain signature 430 449 6.3E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2530 265568c098460150b2fc9e65227f18f6 945 PRINTS PR01183 Ribonucleotide reductase large chain signature 619 642 6.3E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2530 265568c098460150b2fc9e65227f18f6 945 PRINTS PR01183 Ribonucleotide reductase large chain signature 657 679 6.3E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2530 265568c098460150b2fc9e65227f18f6 945 PRINTS PR01183 Ribonucleotide reductase large chain signature 760 787 6.3E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2530 265568c098460150b2fc9e65227f18f6 945 PRINTS PR01183 Ribonucleotide reductase large chain signature 565 576 6.3E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_2530 265568c098460150b2fc9e65227f18f6 945 Pfam PF03477 ATP cone domain 23 119 1.3E-18 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Atc_2530 265568c098460150b2fc9e65227f18f6 945 SUPERFAMILY SSF51998 354 908 2.35E-179 T 13-10-2018 Atc_2530 265568c098460150b2fc9e65227f18f6 945 SUPERFAMILY SSF48168 142 353 1.44E-58 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atc_1397 36a64921229efbc3456afb54fb7073a5 381 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 3 381 28.032 T 13-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 Atc_1397 36a64921229efbc3456afb54fb7073a5 381 Pfam PF13432 Tetratricopeptide repeat 185 246 4.8E-4 T 13-10-2018 Atc_1397 36a64921229efbc3456afb54fb7073a5 381 Pfam PF13432 Tetratricopeptide repeat 47 88 8.8E-6 T 13-10-2018 Atc_1397 36a64921229efbc3456afb54fb7073a5 381 SUPERFAMILY SSF48452 37 241 1.99E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_1397 36a64921229efbc3456afb54fb7073a5 381 Gene3D G3DSA:1.25.40.10 43 105 5.3E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_1282 ac1dbc16d39bbdddf5fadbe1ffe16e73 138 Pfam PF05866 Endodeoxyribonuclease RusA 7 117 2.4E-24 T 13-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 Atc_1282 ac1dbc16d39bbdddf5fadbe1ffe16e73 138 SUPERFAMILY SSF103084 3 129 2.62E-19 T 13-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 Atc_1282 ac1dbc16d39bbdddf5fadbe1ffe16e73 138 Gene3D G3DSA:3.30.1330.70 2 135 1.7E-23 T 13-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 Atc_1210 f97c10dbc0d60c48a53ff2bf1044faa5 212 Pfam PF08346 AntA/AntB antirepressor 20 82 2.2E-15 T 13-10-2018 IPR013557 AntA/AntB antirepressor Atc_1210 f97c10dbc0d60c48a53ff2bf1044faa5 212 Pfam PF10544 T5orf172 domain 128 198 2.0E-6 T 13-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding Atc_1948 543dcd33a3e39a252c1c81eac1f05d63 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 60 3.4E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atc_1948 543dcd33a3e39a252c1c81eac1f05d63 291 Pfam PF03466 LysR substrate binding domain 85 287 7.7E-39 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_1948 543dcd33a3e39a252c1c81eac1f05d63 291 SUPERFAMILY SSF46785 2 108 3.93E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1948 543dcd33a3e39a252c1c81eac1f05d63 291 Gene3D G3DSA:1.10.10.10 1 87 1.1E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1948 543dcd33a3e39a252c1c81eac1f05d63 291 Gene3D G3DSA:3.40.190.290 88 289 8.4E-41 T 13-10-2018 Atc_1948 543dcd33a3e39a252c1c81eac1f05d63 291 SUPERFAMILY SSF53850 88 287 5.74E-35 T 13-10-2018 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 SUPERFAMILY SSF48452 36 329 7.59E-33 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 SUPERFAMILY SSF48452 338 549 9.48E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 Gene3D G3DSA:1.25.40.10 336 550 1.3E-35 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 Gene3D G3DSA:1.25.40.10 31 335 9.6E-45 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 SMART SM00028 337 370 36.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 SMART SM00028 100 133 73.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 SMART SM00028 439 473 15.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 SMART SM00028 270 303 18.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 SMART SM00028 508 541 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 SMART SM00028 168 201 1.9E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 SMART SM00028 405 438 88.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 Pfam PF13432 Tetratricopeptide repeat 344 404 0.0016 T 13-10-2018 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 Pfam PF13432 Tetratricopeptide repeat 514 544 0.014 T 13-10-2018 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 Pfam PF13432 Tetratricopeptide repeat 140 201 4.6E-10 T 13-10-2018 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 Pfam PF13432 Tetratricopeptide repeat 418 474 1.6E-6 T 13-10-2018 Atc_0463 8c1c9ace0ea2694b4966f8509343729b 550 Pfam PF13432 Tetratricopeptide repeat 242 304 1.3E-4 T 13-10-2018 Atc_2628 7408b61376d2ee0d6106cd0930927c6f 390 SUPERFAMILY SSF53383 16 387 1.13E-101 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_2628 7408b61376d2ee0d6106cd0930927c6f 390 Pfam PF00155 Aminotransferase class I and II 44 381 1.4E-54 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atc_2628 7408b61376d2ee0d6106cd0930927c6f 390 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Atc_2628 7408b61376d2ee0d6106cd0930927c6f 390 Gene3D G3DSA:3.40.640.10 61 291 9.7E-122 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_2628 7408b61376d2ee0d6106cd0930927c6f 390 Gene3D G3DSA:3.90.1150.10 45 379 9.7E-122 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_2481 194fe699d8880014077d85397309289d 122 SMART SM00463 32 116 1.5E-12 T 13-10-2018 IPR002625 Smr domain Atc_2481 194fe699d8880014077d85397309289d 122 SUPERFAMILY SSF160443 35 115 7.72E-19 T 13-10-2018 IPR036063 Smr domain superfamily Atc_2481 194fe699d8880014077d85397309289d 122 Gene3D G3DSA:3.30.1370.110 3 121 1.8E-37 T 13-10-2018 Atc_2481 194fe699d8880014077d85397309289d 122 Pfam PF01713 Smr domain 35 115 1.7E-22 T 13-10-2018 IPR002625 Smr domain Atc_1884 ccebcb9bf6c340b3741ae1e17f66a9f5 461 SUPERFAMILY SSF111369 132 335 2.62E-18 T 13-10-2018 Atc_1884 ccebcb9bf6c340b3741ae1e17f66a9f5 461 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 107 401 1.0E-37 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_1884 ccebcb9bf6c340b3741ae1e17f66a9f5 461 Gene3D G3DSA:2.40.420.20 108 396 7.2E-59 T 13-10-2018 Atc_1884 ccebcb9bf6c340b3741ae1e17f66a9f5 461 Gene3D G3DSA:1.10.287.470 169 223 7.2E-59 T 13-10-2018 Atc_1884 ccebcb9bf6c340b3741ae1e17f66a9f5 461 Gene3D G3DSA:2.40.30.170 120 337 7.2E-59 T 13-10-2018 Atc_1884 ccebcb9bf6c340b3741ae1e17f66a9f5 461 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 118 331 1.2E-71 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_1884 ccebcb9bf6c340b3741ae1e17f66a9f5 461 Gene3D G3DSA:2.40.50.100 134 257 7.2E-59 T 13-10-2018 Atc_1327 3cfac75bcd5e82d790ed9f3aaa0d2cbd 355 Pfam PF00676 Dehydrogenase E1 component 12 265 2.8E-78 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Atc_1327 3cfac75bcd5e82d790ed9f3aaa0d2cbd 355 SUPERFAMILY SSF52518 6 340 1.04E-87 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_1327 3cfac75bcd5e82d790ed9f3aaa0d2cbd 355 Gene3D G3DSA:3.40.50.970 1 269 5.2E-110 T 13-10-2018 Atc_1327 3cfac75bcd5e82d790ed9f3aaa0d2cbd 355 Gene3D G3DSA:3.40.50.970 270 351 2.5E-8 T 13-10-2018 Atc_0051 33505312ed71936db8a43b4c0b18a125 247 Gene3D G3DSA:2.60.120.620 6 232 3.4E-25 T 13-10-2018 Atc_0783 38ecf810ca95363020689ea126748601 351 Pfam PF05598 Transposase domain (DUF772) 53 127 5.4E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0783 38ecf810ca95363020689ea126748601 351 Pfam PF01609 Transposase DDE domain 170 342 1.2E-14 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1171 c094244b1ca2f2e4fdc7ef7e5b3235a8 542 Gene3D G3DSA:3.40.50.300 232 524 2.9E-71 T 13-10-2018 Atc_1171 c094244b1ca2f2e4fdc7ef7e5b3235a8 542 Pfam PF00437 Type II/IV secretion system protein 112 404 3.6E-36 T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_1171 c094244b1ca2f2e4fdc7ef7e5b3235a8 542 Gene3D G3DSA:3.30.450.90 77 222 4.3E-8 T 13-10-2018 Atc_1171 c094244b1ca2f2e4fdc7ef7e5b3235a8 542 SUPERFAMILY SSF52540 104 522 1.54E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0764 1a84778833609b129349e67fcf9edc49 425 Pfam PF07804 HipA-like C-terminal domain 174 393 1.2E-49 T 13-10-2018 IPR012893 HipA-like, C-terminal Atc_0764 1a84778833609b129349e67fcf9edc49 425 Pfam PF13657 HipA N-terminal domain 35 122 3.6E-8 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 Atc_2523 07d5a2ee9cb3d72fad219b0928f2112e 353 Gene3D G3DSA:3.50.50.60 4 145 4.0E-14 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2523 07d5a2ee9cb3d72fad219b0928f2112e 353 SUPERFAMILY SSF51905 6 341 1.94E-23 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2523 07d5a2ee9cb3d72fad219b0928f2112e 353 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.2E-5 T 13-10-2018 Atc_2523 07d5a2ee9cb3d72fad219b0928f2112e 353 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 1.2E-5 T 13-10-2018 Atc_2523 07d5a2ee9cb3d72fad219b0928f2112e 353 Gene3D G3DSA:3.50.50.60 197 344 3.1E-6 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2523 07d5a2ee9cb3d72fad219b0928f2112e 353 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 332 5.0E-19 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atc_2523 07d5a2ee9cb3d72fad219b0928f2112e 353 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 4.7E-8 T 13-10-2018 Atc_2523 07d5a2ee9cb3d72fad219b0928f2112e 353 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.7E-8 T 13-10-2018 Atc_2523 07d5a2ee9cb3d72fad219b0928f2112e 353 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 4.7E-8 T 13-10-2018 Atc_1301 c28159d729cba4475c2389e6b76e5e09 598 Pfam PF07244 Surface antigen variable number repeat 205 273 1.1E-7 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atc_1301 c28159d729cba4475c2389e6b76e5e09 598 Gene3D G3DSA:2.40.160.50 280 598 1.5E-71 T 13-10-2018 Atc_1301 c28159d729cba4475c2389e6b76e5e09 598 Gene3D G3DSA:3.10.20.310 204 279 2.5E-13 T 13-10-2018 Atc_1301 c28159d729cba4475c2389e6b76e5e09 598 Gene3D G3DSA:3.10.20.310 116 203 1.0E-12 T 13-10-2018 Atc_1301 c28159d729cba4475c2389e6b76e5e09 598 Pfam PF01103 Surface antigen 309 597 5.6E-28 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Atc_1965 d5d3c6b2c02b73ba6291e88b5a02db22 72 Gene3D G3DSA:1.10.3910.10 9 66 5.0E-14 T 13-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Atc_1965 d5d3c6b2c02b73ba6291e88b5a02db22 72 Pfam PF08984 Domain of unknown function (DUF1858) 10 59 5.9E-11 T 13-10-2018 IPR015077 Domain of unknown function DUF1858 Atc_1965 d5d3c6b2c02b73ba6291e88b5a02db22 72 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 11 62 4.5E-14 T 13-10-2018 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide Atc_1965 d5d3c6b2c02b73ba6291e88b5a02db22 72 SUPERFAMILY SSF140683 9 64 8.24E-11 T 13-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Atc_0319 b9976e68bedbc9146d7505084c0ff0fa 702 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 404 4.0E-24 T 13-10-2018 IPR004477 ComEC/Rec2-related protein Atc_0319 b9976e68bedbc9146d7505084c0ff0fa 702 Pfam PF03772 Competence protein 210 476 4.0E-54 T 13-10-2018 IPR004477 ComEC/Rec2-related protein Atc_0308 50060f849d833460bef38dec06287a17 125 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 120 4.4E-26 T 13-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein Atc_0308 50060f849d833460bef38dec06287a17 125 SUPERFAMILY SSF64076 1 121 1.14E-30 T 13-10-2018 IPR036748 MTH938-like superfamily Atc_0308 50060f849d833460bef38dec06287a17 125 Gene3D G3DSA:3.40.1230.10 1 124 1.3E-33 T 13-10-2018 IPR036748 MTH938-like superfamily Atc_2605 31a1ad5c1b88a8b11142074034b7d441 349 SMART SM00382 122 256 7.0E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2605 31a1ad5c1b88a8b11142074034b7d441 349 Gene3D G3DSA:3.40.50.300 101 349 3.6E-103 T 13-10-2018 Atc_2605 31a1ad5c1b88a8b11142074034b7d441 349 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 2.7E-153 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Atc_2605 31a1ad5c1b88a8b11142074034b7d441 349 SUPERFAMILY SSF52540 4 337 1.42E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2605 31a1ad5c1b88a8b11142074034b7d441 349 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_2605 31a1ad5c1b88a8b11142074034b7d441 349 Gene3D G3DSA:3.30.450.90 1 100 1.0E-34 T 13-10-2018 Atc_2605 31a1ad5c1b88a8b11142074034b7d441 349 Pfam PF00437 Type II/IV secretion system protein 12 269 1.9E-46 T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_3p14 9f0e6e12312fb8bf8404412f5102513d 947 Gene3D G3DSA:3.30.930.30 21 229 6.3E-49 T 13-10-2018 Atc_3p14 9f0e6e12312fb8bf8404412f5102513d 947 Pfam PF03389 MobA/MobL family 83 246 2.5E-15 T 13-10-2018 IPR005053 MobA/MobL protein Atc_m101 f699aaa89d01d40928037ed8ee2c9e08 284 Pfam PF08721 TnsA endonuclease C terminal 176 255 1.2E-15 T 13-10-2018 IPR014832 TnsA endonuclease C-terminal Atc_m101 f699aaa89d01d40928037ed8ee2c9e08 284 SUPERFAMILY SSF46785 179 270 2.58E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_m101 f699aaa89d01d40928037ed8ee2c9e08 284 Pfam PF08722 TnsA endonuclease N terminal 84 174 7.5E-28 T 13-10-2018 IPR014833 TnsA endonuclease, N-terminal Atc_m101 f699aaa89d01d40928037ed8ee2c9e08 284 Gene3D G3DSA:3.40.1350.10 17 177 6.0E-67 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Atc_m101 f699aaa89d01d40928037ed8ee2c9e08 284 Gene3D G3DSA:1.10.10.10 179 275 2.3E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_m101 f699aaa89d01d40928037ed8ee2c9e08 284 SUPERFAMILY SSF52980 21 177 2.31E-61 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Atc_0910 27b67e2d299612dd2d8d99e4b4850abd 237 Gene3D G3DSA:3.20.180.10 151 237 1.8E-26 T 13-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily Atc_0910 27b67e2d299612dd2d8d99e4b4850abd 237 SUPERFAMILY SSF50475 7 234 6.17E-45 T 13-10-2018 Atc_0910 27b67e2d299612dd2d8d99e4b4850abd 237 Gene3D G3DSA:2.30.110.10 2 143 1.6E-35 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atc_0910 27b67e2d299612dd2d8d99e4b4850abd 237 Pfam PF10615 Protein of unknown function (DUF2470) 158 228 2.5E-13 T 13-10-2018 IPR019595 Domain of unknown function DUF2470 Atc_0910 27b67e2d299612dd2d8d99e4b4850abd 237 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 9 141 3.7E-11 T 13-10-2018 Atc_2165 f1fcb16393f331addc6b7988b764d3fb 197 Pfam PF00571 CBS domain 46 91 1.2E-7 T 13-10-2018 IPR000644 CBS domain Atc_2165 f1fcb16393f331addc6b7988b764d3fb 197 Gene3D G3DSA:3.10.580.10 34 180 6.8E-11 T 13-10-2018 Atc_2165 f1fcb16393f331addc6b7988b764d3fb 197 SUPERFAMILY SSF54631 40 170 1.55E-12 T 13-10-2018 Atc_0384 047b4f786c7f633c2708a151a8050edf 487 Pfam PF00534 Glycosyl transferases group 1 302 448 7.8E-16 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Atc_0384 047b4f786c7f633c2708a151a8050edf 487 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 12 485 8.2E-168 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Atc_0384 047b4f786c7f633c2708a151a8050edf 487 Pfam PF08323 Starch synthase catalytic domain 12 247 8.6E-72 T 13-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Atc_0384 047b4f786c7f633c2708a151a8050edf 487 Hamap MF_00484 Glycogen synthase [glgA]. 11 486 43.709 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Atc_0384 047b4f786c7f633c2708a151a8050edf 487 Gene3D G3DSA:3.40.50.2000 13 483 1.0E-179 T 13-10-2018 Atc_0384 047b4f786c7f633c2708a151a8050edf 487 Gene3D G3DSA:3.40.50.2000 261 470 1.0E-179 T 13-10-2018 Atc_0384 047b4f786c7f633c2708a151a8050edf 487 SUPERFAMILY SSF53756 10 486 3.11E-123 T 13-10-2018 Atc_1082 823439260965ed86cc5243d92ceb8237 436 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 232 423 7.7E-15 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Atc_0280 209cf4608d789dfa7a60bc5920cdec2c 328 SUPERFAMILY SSF52518 6 320 4.1E-90 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_0280 209cf4608d789dfa7a60bc5920cdec2c 328 Gene3D G3DSA:3.40.50.970 1 327 4.4E-116 T 13-10-2018 Atc_0280 209cf4608d789dfa7a60bc5920cdec2c 328 Pfam PF00676 Dehydrogenase E1 component 12 310 6.1E-76 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Atc_0280 209cf4608d789dfa7a60bc5920cdec2c 328 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 7 319 4.4E-124 T 13-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 Atc_0436 90f88af1df8b1ed9097801ec4b9e89f8 142 SUPERFAMILY SSF88723 3 135 5.89E-18 T 13-10-2018 IPR029060 PIN-like domain superfamily Atc_0436 90f88af1df8b1ed9097801ec4b9e89f8 142 Gene3D G3DSA:3.40.50.1010 1 135 2.5E-28 T 13-10-2018 Atc_0436 90f88af1df8b1ed9097801ec4b9e89f8 142 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 137 11.044 T 13-10-2018 IPR022907 VapC family GO:0004540 Atc_0436 90f88af1df8b1ed9097801ec4b9e89f8 142 Pfam PF01850 PIN domain 4 129 8.3E-9 T 13-10-2018 IPR002716 PIN domain Atc_0555 4b843038133015650df61304a027ebef 202 Pfam PF13847 Methyltransferase domain 39 145 3.1E-21 T 13-10-2018 IPR025714 Methyltransferase domain Atc_0555 4b843038133015650df61304a027ebef 202 SUPERFAMILY SSF53335 17 198 2.89E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0555 4b843038133015650df61304a027ebef 202 Gene3D G3DSA:3.40.50.150 11 199 1.1E-46 T 13-10-2018 Atc_1898 4b843038133015650df61304a027ebef 202 Pfam PF13847 Methyltransferase domain 39 145 3.1E-21 T 13-10-2018 IPR025714 Methyltransferase domain Atc_1898 4b843038133015650df61304a027ebef 202 SUPERFAMILY SSF53335 17 198 2.89E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1898 4b843038133015650df61304a027ebef 202 Gene3D G3DSA:3.40.50.150 11 199 1.1E-46 T 13-10-2018 Atc_1300 3f83ca5c78051794cdfaa52d283980d7 1191 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 848 1191 8.9E-66 T 13-10-2018 IPR007452 Translocation and assembly module TamB Atc_0408 83edccea6bb79717aabe2116a4e46d78 599 Gene3D G3DSA:1.20.140.70 35 170 6.9E-12 T 13-10-2018 Atc_0408 83edccea6bb79717aabe2116a4e46d78 599 Gene3D G3DSA:1.10.1370.20 224 597 5.8E-112 T 13-10-2018 Atc_0408 83edccea6bb79717aabe2116a4e46d78 599 SUPERFAMILY SSF55486 55 592 2.55E-97 T 13-10-2018 Atc_0408 83edccea6bb79717aabe2116a4e46d78 599 Pfam PF01432 Peptidase family M3 337 578 7.8E-32 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Atc_0408 83edccea6bb79717aabe2116a4e46d78 599 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 14 591 2.1E-172 T 13-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 Atc_0408 83edccea6bb79717aabe2116a4e46d78 599 Pfam PF08439 Oligopeptidase F 121 185 1.5E-13 T 13-10-2018 IPR013647 Oligopeptidase F, N-terminal domain Atc_0161 66b44e67aac5407f515a2e9dbf36f6e2 135 Gene3D G3DSA:3.10.450.50 1 135 1.1E-70 T 13-10-2018 Atc_0161 66b44e67aac5407f515a2e9dbf36f6e2 135 SUPERFAMILY SSF54427 1 135 1.18E-66 T 13-10-2018 IPR032710 NTF2-like domain superfamily Atc_0161 66b44e67aac5407f515a2e9dbf36f6e2 135 Pfam PF07080 Protein of unknown function (DUF1348) 1 116 3.8E-57 T 13-10-2018 IPR009783 Protein of unknown function DUF1348 Atc_0770 3acbad78f5186caa4569c2b1e689477e 261 Pfam PF01061 ABC-2 type transporter 18 222 5.0E-14 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Atc_1026 98de06f268f26b72c76a4580ebc714b5 420 Pfam PF00872 Transposase, Mutator family 18 384 6.5E-66 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Atc_m008 14d5e10b3bd2a1133b7dda73bcbbf030 116 Pfam PF05598 Transposase domain (DUF772) 58 108 8.9E-16 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1p02 c021efcc27967e1e454674a6cb3df144 74 Pfam PF05509 TraY domain 4 49 3.1E-9 T 13-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 Atc_1p02 c021efcc27967e1e454674a6cb3df144 74 SUPERFAMILY SSF47598 2 41 4.74E-10 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atc_1962 d313a3d04975fcafa42813b47aaaa52a 454 Gene3D G3DSA:3.90.660.20 41 396 1.1E-130 T 13-10-2018 Atc_1962 d313a3d04975fcafa42813b47aaaa52a 454 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 4 438 2.3E-86 T 13-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atc_1962 d313a3d04975fcafa42813b47aaaa52a 454 Pfam PF01593 Flavin containing amine oxidoreductase 13 402 2.2E-52 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Atc_1962 d313a3d04975fcafa42813b47aaaa52a 454 Gene3D G3DSA:1.10.3110.10 99 199 1.1E-130 T 13-10-2018 Atc_1962 d313a3d04975fcafa42813b47aaaa52a 454 Gene3D G3DSA:3.50.50.60 6 438 1.1E-130 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1962 d313a3d04975fcafa42813b47aaaa52a 454 SUPERFAMILY SSF51905 6 437 7.77E-47 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1962 d313a3d04975fcafa42813b47aaaa52a 454 SUPERFAMILY SSF54373 290 396 2.22E-27 T 13-10-2018 Atc_m035 94d9b5e745e87efd5e4d1f6cff4f1ed1 91 Gene3D G3DSA:4.10.520.10 1 91 7.8E-30 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_m035 94d9b5e745e87efd5e4d1f6cff4f1ed1 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.0E-30 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_m035 94d9b5e745e87efd5e4d1f6cff4f1ed1 91 SUPERFAMILY SSF47729 1 90 3.97E-27 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_m035 94d9b5e745e87efd5e4d1f6cff4f1ed1 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.1E-11 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_m035 94d9b5e745e87efd5e4d1f6cff4f1ed1 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.1E-11 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_m035 94d9b5e745e87efd5e4d1f6cff4f1ed1 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.1E-11 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_m035 94d9b5e745e87efd5e4d1f6cff4f1ed1 91 SMART SM00411 1 90 1.3E-28 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_2799 8ba0dc63bfe4a3fd7fb8e912f9bbc2e1 233 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 13 231 38.965 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Atc_2799 8ba0dc63bfe4a3fd7fb8e912f9bbc2e1 233 TIGRFAM TIGR02796 tolQ: protein TolQ 14 226 2.8E-80 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Atc_2799 8ba0dc63bfe4a3fd7fb8e912f9bbc2e1 233 Pfam PF01618 MotA/TolQ/ExbB proton channel family 89 214 3.2E-37 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atc_2675 371394d77ec8a60c6de39c124ab992e0 383 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 22 374 5.3E-146 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Atc_2675 371394d77ec8a60c6de39c124ab992e0 383 PIRSF PIRSF000443 3 382 2.8E-145 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Atc_2675 371394d77ec8a60c6de39c124ab992e0 383 Gene3D G3DSA:1.10.1740.110 187 293 1.5E-148 T 13-10-2018 Atc_2675 371394d77ec8a60c6de39c124ab992e0 383 SUPERFAMILY SSF53474 14 376 1.39E-109 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_2675 371394d77ec8a60c6de39c124ab992e0 383 Gene3D G3DSA:3.40.50.1820 26 362 1.5E-148 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_2675 371394d77ec8a60c6de39c124ab992e0 383 Pfam PF00561 alpha/beta hydrolase fold 51 360 1.6E-30 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atc_2675 371394d77ec8a60c6de39c124ab992e0 383 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 13 375 31.608 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Atc_1390 65cdad1a52424e201b2ba9e3f3063a90 338 Pfam PF00793 DAHP synthetase I family 93 324 8.3E-70 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Atc_1390 65cdad1a52424e201b2ba9e3f3063a90 338 SUPERFAMILY SSF51569 1 336 1.92E-111 T 13-10-2018 Atc_1390 65cdad1a52424e201b2ba9e3f3063a90 338 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 71 328 1.6E-111 T 13-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Atc_1390 65cdad1a52424e201b2ba9e3f3063a90 338 Gene3D G3DSA:3.20.20.70 76 333 2.8E-99 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_1390 65cdad1a52424e201b2ba9e3f3063a90 338 Gene3D G3DSA:3.30.70.1140 1 75 1.7E-27 T 13-10-2018 Atc_0719 94d820108ae3c24171f5c110ede7e734 533 PIRSF PIRSF006060 1 460 2.7E-60 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_0719 94d820108ae3c24171f5c110ede7e734 533 Pfam PF13520 Amino acid permease 13 419 4.3E-41 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_0719 94d820108ae3c24171f5c110ede7e734 533 Gene3D G3DSA:1.20.1740.10 6 454 1.6E-59 T 13-10-2018 Atc_2411 df3a3f2e311886ef93e6da5f1005f2be 318 Pfam PF01609 Transposase DDE domain 144 308 6.7E-25 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_2411 df3a3f2e311886ef93e6da5f1005f2be 318 Pfam PF05598 Transposase domain (DUF772) 52 127 9.3E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1756 3d53cb8a7e7950c7c92bd8f69fb38bae 232 PIRSF PIRSF005902 1 232 2.9E-53 T 13-10-2018 IPR001130 TatD family GO:0016788 Atc_1756 3d53cb8a7e7950c7c92bd8f69fb38bae 232 Gene3D G3DSA:3.20.20.140 1 230 2.1E-60 T 13-10-2018 Atc_1756 3d53cb8a7e7950c7c92bd8f69fb38bae 232 Pfam PF01026 TatD related DNase 2 228 7.9E-52 T 13-10-2018 IPR001130 TatD family GO:0016788 Atc_1756 3d53cb8a7e7950c7c92bd8f69fb38bae 232 SUPERFAMILY SSF51556 2 229 7.4E-60 T 13-10-2018 IPR032466 Metal-dependent hydrolase Atc_0431 775db7e676be02a7936ac2414d9df2c0 609 Gene3D G3DSA:3.40.50.300 17 216 6.5E-9 T 13-10-2018 Atc_0431 775db7e676be02a7936ac2414d9df2c0 609 SUPERFAMILY SSF52540 37 386 4.9E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0431 775db7e676be02a7936ac2414d9df2c0 609 Gene3D G3DSA:3.40.50.300 242 419 6.4E-8 T 13-10-2018 Atc_0087 d5fbfdd032a0f135cca64d3c6a5d2139 241 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 40 157 2.3E-6 T 13-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 Atc_0087 d5fbfdd032a0f135cca64d3c6a5d2139 241 Gene3D G3DSA:3.40.50.1820 17 223 1.5E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_0087 d5fbfdd032a0f135cca64d3c6a5d2139 241 SUPERFAMILY SSF53474 21 221 6.18E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_m025 a12c33f7debf3debb3c9fabca5eee48e 319 Gene3D G3DSA:3.40.50.720 158 316 1.3E-32 T 13-10-2018 Atc_m025 a12c33f7debf3debb3c9fabca5eee48e 319 Pfam PF02625 XdhC and CoxI family 14 58 1.4E-9 T 13-10-2018 IPR003777 XdhC- CoxI Atc_m025 a12c33f7debf3debb3c9fabca5eee48e 319 Pfam PF13478 XdhC Rossmann domain 159 297 3.5E-28 T 13-10-2018 IPR027051 XdhC Rossmann domain Atc_m025 a12c33f7debf3debb3c9fabca5eee48e 319 SUPERFAMILY SSF51735 151 220 5.17E-5 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0616 4fbc1c68ac8b85f351153c489f37be5c 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 2.3E-26 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0616 4fbc1c68ac8b85f351153c489f37be5c 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 103 4.9E-40 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0616 4fbc1c68ac8b85f351153c489f37be5c 106 SUPERFAMILY SSF50104 3 102 1.17E-35 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Atc_0616 4fbc1c68ac8b85f351153c489f37be5c 106 Gene3D G3DSA:2.30.30.30 1 104 1.2E-38 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Atc_0616 4fbc1c68ac8b85f351153c489f37be5c 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 21.911 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0616 4fbc1c68ac8b85f351153c489f37be5c 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0616 4fbc1c68ac8b85f351153c489f37be5c 106 SMART SM00739 3 30 1.3E-5 T 13-10-2018 IPR005824 KOW Atc_0616 4fbc1c68ac8b85f351153c489f37be5c 106 Pfam PF00467 KOW motif 6 37 4.2E-7 T 13-10-2018 IPR005824 KOW Atc_m062 fa28fbde177873e18cbcb63da613835a 157 Pfam PF13592 Winged helix-turn helix 102 153 3.2E-12 T 13-10-2018 IPR025959 Winged helix-turn helix domain Atc_m062 fa28fbde177873e18cbcb63da613835a 157 Pfam PF13384 Homeodomain-like domain 14 60 5.0E-6 T 13-10-2018 Atc_0385 fd70916a9341cb35b5b3c894fb000a95 186 Gene3D G3DSA:3.40.50.2000 4 184 3.8E-23 T 13-10-2018 Atc_1211 0a496c084f8df6fd1650262194346314 858 Gene3D G3DSA:3.40.50.300 387 663 2.7E-44 T 13-10-2018 Atc_1211 0a496c084f8df6fd1650262194346314 858 SUPERFAMILY SSF52540 189 664 1.17E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1211 0a496c084f8df6fd1650262194346314 858 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 137 668 1.9E-99 T 13-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Atc_0128 f6b53105e3375ae567d8bef03bc1accb 340 Pfam PF05598 Transposase domain (DUF772) 58 130 6.7E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0128 f6b53105e3375ae567d8bef03bc1accb 340 Pfam PF01609 Transposase DDE domain 145 332 1.7E-29 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_m226 f6b53105e3375ae567d8bef03bc1accb 340 Pfam PF05598 Transposase domain (DUF772) 58 130 6.7E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_m226 f6b53105e3375ae567d8bef03bc1accb 340 Pfam PF01609 Transposase DDE domain 145 332 1.7E-29 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0680 ba421adcfae80ab85bb977a5ce543cf9 338 Gene3D G3DSA:2.40.170.20 1 338 2.7E-53 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atc_0680 ba421adcfae80ab85bb977a5ce543cf9 338 Pfam PF00593 TonB dependent receptor 7 317 2.1E-36 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atc_0680 ba421adcfae80ab85bb977a5ce543cf9 338 SUPERFAMILY SSF56935 4 338 7.33E-49 T 13-10-2018 Atc_m083 e1a8827ad0ad649904001f066359145a 478 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 114 326 6.4E-79 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_m083 e1a8827ad0ad649904001f066359145a 478 Gene3D G3DSA:2.40.50.100 211 252 4.8E-51 T 13-10-2018 Atc_m083 e1a8827ad0ad649904001f066359145a 478 Gene3D G3DSA:2.40.50.100 131 165 1.0E-12 T 13-10-2018 Atc_m083 e1a8827ad0ad649904001f066359145a 478 Gene3D G3DSA:2.40.420.20 106 116 1.0E-12 T 13-10-2018 Atc_m083 e1a8827ad0ad649904001f066359145a 478 Gene3D G3DSA:2.40.420.20 333 391 4.8E-51 T 13-10-2018 Atc_m083 e1a8827ad0ad649904001f066359145a 478 Gene3D G3DSA:1.10.287.470 166 180 1.0E-12 T 13-10-2018 Atc_m083 e1a8827ad0ad649904001f066359145a 478 Gene3D G3DSA:1.10.287.470 191 210 4.8E-51 T 13-10-2018 Atc_m083 e1a8827ad0ad649904001f066359145a 478 Gene3D G3DSA:2.40.30.170 253 332 4.8E-51 T 13-10-2018 Atc_m083 e1a8827ad0ad649904001f066359145a 478 Gene3D G3DSA:2.40.30.170 117 130 1.0E-12 T 13-10-2018 Atc_m083 e1a8827ad0ad649904001f066359145a 478 SUPERFAMILY SSF111369 129 330 1.83E-20 T 13-10-2018 Atc_m083 e1a8827ad0ad649904001f066359145a 478 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 209 396 6.6E-36 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_2863 8fcc3da755e66b7cbfedcedd0ebcdcfb 195 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 1 185 2.9E-45 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Atc_2863 8fcc3da755e66b7cbfedcedd0ebcdcfb 195 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 195 21.4 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Atc_2863 8fcc3da755e66b7cbfedcedd0ebcdcfb 195 Pfam PF01121 Dephospho-CoA kinase 1 179 1.6E-52 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Atc_2863 8fcc3da755e66b7cbfedcedd0ebcdcfb 195 Gene3D G3DSA:3.40.50.300 1 195 4.4E-60 T 13-10-2018 Atc_2863 8fcc3da755e66b7cbfedcedd0ebcdcfb 195 SUPERFAMILY SSF52540 1 191 1.08E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_3p17 aa0f8f892df631f37dbdfe805b8363e6 332 Pfam PF09084 NMT1/THI5 like 115 262 4.0E-7 T 13-10-2018 IPR015168 SsuA/THI5-like Atc_3p17 aa0f8f892df631f37dbdfe805b8363e6 332 Gene3D G3DSA:3.40.190.10 123 222 7.4E-32 T 13-10-2018 Atc_3p17 aa0f8f892df631f37dbdfe805b8363e6 332 Gene3D G3DSA:3.40.190.10 28 296 7.4E-32 T 13-10-2018 Atc_3p17 aa0f8f892df631f37dbdfe805b8363e6 332 SUPERFAMILY SSF53850 27 309 8.15E-29 T 13-10-2018 Atc_3p17 aa0f8f892df631f37dbdfe805b8363e6 332 Gene3D G3DSA:1.10.8.450 255 288 7.4E-32 T 13-10-2018 Atc_1257 970cfd3e07663a55713140180b85f31c 323 Gene3D G3DSA:1.10.150.20 170 255 7.8E-46 T 13-10-2018 Atc_1257 970cfd3e07663a55713140180b85f31c 323 SUPERFAMILY SSF47807 185 295 1.39E-12 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Atc_1257 970cfd3e07663a55713140180b85f31c 323 Gene3D G3DSA:3.40.50.1010 5 256 7.8E-46 T 13-10-2018 Atc_1257 970cfd3e07663a55713140180b85f31c 323 SMART SM00475 2 270 1.2E-11 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Atc_1257 970cfd3e07663a55713140180b85f31c 323 SMART SM00279 183 218 1.5E-6 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Atc_1257 970cfd3e07663a55713140180b85f31c 323 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 160 7.7E-21 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Atc_1257 970cfd3e07663a55713140180b85f31c 323 SUPERFAMILY SSF88723 4 170 1.81E-24 T 13-10-2018 IPR029060 PIN-like domain superfamily Atc_1257 970cfd3e07663a55713140180b85f31c 323 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 186 255 9.0E-11 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Atc_1356 bf497cf5bf0a6f170c3e41bc42ea5565 532 SUPERFAMILY SSF161098 5 256 1.31E-25 T 13-10-2018 IPR035906 MetI-like superfamily Atc_1356 bf497cf5bf0a6f170c3e41bc42ea5565 532 SUPERFAMILY SSF161098 284 521 2.94E-23 T 13-10-2018 IPR035906 MetI-like superfamily Atc_1356 bf497cf5bf0a6f170c3e41bc42ea5565 532 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 341 519 1.6E-6 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atc_1356 bf497cf5bf0a6f170c3e41bc42ea5565 532 Gene3D G3DSA:1.10.3720.10 282 527 6.5E-21 T 13-10-2018 IPR035906 MetI-like superfamily Atc_1356 bf497cf5bf0a6f170c3e41bc42ea5565 532 Gene3D G3DSA:1.10.3720.10 9 263 1.0E-26 T 13-10-2018 IPR035906 MetI-like superfamily Atc_0377 a34dbcc3fab0b448b42b0e248264ec01 135 SUPERFAMILY SSF53062 3 128 2.75E-26 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Atc_0377 a34dbcc3fab0b448b42b0e248264ec01 135 Gene3D G3DSA:3.40.50.510 2 133 6.6E-25 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Atc_0377 a34dbcc3fab0b448b42b0e248264ec01 135 Pfam PF03610 PTS system fructose IIA component 4 105 5.8E-18 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Atc_2536 0ef94ca4be0cf2ab6b410f0a735f6a36 135 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 74 4.4E-27 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Atc_2536 0ef94ca4be0cf2ab6b410f0a735f6a36 135 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 9.3E-30 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Atc_2536 0ef94ca4be0cf2ab6b410f0a735f6a36 135 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 9.3E-30 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Atc_2536 0ef94ca4be0cf2ab6b410f0a735f6a36 135 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 9.3E-30 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Atc_2536 0ef94ca4be0cf2ab6b410f0a735f6a36 135 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 9.3E-30 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Atc_2536 0ef94ca4be0cf2ab6b410f0a735f6a36 135 Pfam PF03840 Preprotein translocase SecG subunit 4 73 7.5E-22 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Atc_0356 90acd85913ff598df5656f318fec080a 215 Pfam PF01634 ATP phosphoribosyltransferase 54 210 3.1E-51 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Atc_0356 90acd85913ff598df5656f318fec080a 215 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 190 4.3E-61 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Atc_0356 90acd85913ff598df5656f318fec080a 215 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 214 55.52 T 13-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Atc_0356 90acd85913ff598df5656f318fec080a 215 Gene3D G3DSA:3.40.190.10 96 182 3.5E-74 T 13-10-2018 Atc_0356 90acd85913ff598df5656f318fec080a 215 Gene3D G3DSA:3.40.190.10 6 204 3.5E-74 T 13-10-2018 Atc_0356 90acd85913ff598df5656f318fec080a 215 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 149 170 - T 13-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Atc_0356 90acd85913ff598df5656f318fec080a 215 SUPERFAMILY SSF53850 3 213 9.12E-67 T 13-10-2018 Atc_0620 aadae3ef8958548cf6c10c925d44e7db 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 118 9.1E-38 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0620 aadae3ef8958548cf6c10c925d44e7db 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 118 28.026 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atc_0620 aadae3ef8958548cf6c10c925d44e7db 118 Gene3D G3DSA:3.30.420.100 2 118 2.7E-43 T 13-10-2018 Atc_0620 aadae3ef8958548cf6c10c925d44e7db 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 118 5.6E-40 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0620 aadae3ef8958548cf6c10c925d44e7db 118 SUPERFAMILY SSF53137 4 116 1.24E-51 T 13-10-2018 Atc_2791 e93b4170ef3832ae31024d0d1a069cc9 142 Pfam PF00293 NUDIX domain 2 124 5.7E-19 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atc_2791 e93b4170ef3832ae31024d0d1a069cc9 142 ProSitePatterns PS00893 Nudix box signature. 28 49 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atc_2791 e93b4170ef3832ae31024d0d1a069cc9 142 PRINTS PR00502 NUDIX hydrolase family signature 37 52 5.1E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atc_2791 e93b4170ef3832ae31024d0d1a069cc9 142 PRINTS PR00502 NUDIX hydrolase family signature 23 37 5.1E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atc_2791 e93b4170ef3832ae31024d0d1a069cc9 142 Gene3D G3DSA:3.90.79.10 1 133 2.4E-28 T 13-10-2018 Atc_2791 e93b4170ef3832ae31024d0d1a069cc9 142 PRINTS PR01404 DATP pyrophosphohydrolase signature 10 31 9.2E-7 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Atc_2791 e93b4170ef3832ae31024d0d1a069cc9 142 PRINTS PR01404 DATP pyrophosphohydrolase signature 87 108 9.2E-7 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Atc_2791 e93b4170ef3832ae31024d0d1a069cc9 142 PRINTS PR01404 DATP pyrophosphohydrolase signature 114 127 9.2E-7 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Atc_2791 e93b4170ef3832ae31024d0d1a069cc9 142 SUPERFAMILY SSF55811 1 127 3.93E-22 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atc_0746 43fbdd88b8a5e0d30bd6f34b1494afaa 461 Pfam PF02661 Fic/DOC family 288 375 1.7E-11 T 13-10-2018 IPR003812 Fido domain Atc_0746 43fbdd88b8a5e0d30bd6f34b1494afaa 461 Gene3D G3DSA:1.10.3290.10 206 423 8.5E-26 T 13-10-2018 IPR036597 Fido-like domain superfamily Atc_0746 43fbdd88b8a5e0d30bd6f34b1494afaa 461 SUPERFAMILY SSF140931 287 434 3.53E-24 T 13-10-2018 IPR036597 Fido-like domain superfamily Atc_1578 543fef89120c618406718010251288b4 46 Pfam PF01609 Transposase DDE domain 5 46 7.5E-6 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_2583 44fca644ff5595bd788b06ee2073334c 213 Gene3D G3DSA:3.40.50.1240 4 198 1.4E-51 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Atc_2583 44fca644ff5595bd788b06ee2073334c 213 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 191 4.7E-48 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atc_2583 44fca644ff5595bd788b06ee2073334c 213 SMART SM00855 7 153 6.6E-17 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atc_2583 44fca644ff5595bd788b06ee2073334c 213 SUPERFAMILY SSF53254 7 196 5.37E-49 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Atc_2583 44fca644ff5595bd788b06ee2073334c 213 PIRSF PIRSF000709 2 194 1.1E-10 T 13-10-2018 Atc_1206 7d850e9b91693ec20ca06cf973785abe 430 Pfam PF02195 ParB-like nuclease domain 40 144 7.7E-21 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_1206 7d850e9b91693ec20ca06cf973785abe 430 SMART SM00470 37 144 1.1E-22 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_1206 7d850e9b91693ec20ca06cf973785abe 430 Pfam PF13560 Helix-turn-helix domain 154 193 3.9E-6 T 13-10-2018 Atc_1206 7d850e9b91693ec20ca06cf973785abe 430 Gene3D G3DSA:3.90.1530.30 50 129 2.9E-15 T 13-10-2018 Atc_1206 7d850e9b91693ec20ca06cf973785abe 430 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 188 6.1E-27 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Atc_1206 7d850e9b91693ec20ca06cf973785abe 430 Gene3D G3DSA:1.10.10.2830 131 221 5.8E-12 T 13-10-2018 Atc_1206 7d850e9b91693ec20ca06cf973785abe 430 SUPERFAMILY SSF110849 40 186 3.14E-21 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atc_m254 f75ead2cee628257b1f3c182c4b09d28 225 Pfam PF06912 Protein of unknown function (DUF1275) 18 216 9.2E-31 T 13-10-2018 IPR010699 Protein of unknown function DUF1275 Atc_m166 1221fe64a84c4e2933a49f8e9de37489 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 51 6.6E-8 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Atc_m166 1221fe64a84c4e2933a49f8e9de37489 73 SUPERFAMILY SSF143120 1 41 1.96E-6 T 13-10-2018 IPR036165 YefM-like superfamily Atc_m003 3b1b28fb29bf34f3cff59118ba427043 267 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 188 248 7.9E-14 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Atc_m003 3b1b28fb29bf34f3cff59118ba427043 267 SUPERFAMILY SSF74653 150 260 3.4E-19 T 13-10-2018 Atc_m003 3b1b28fb29bf34f3cff59118ba427043 267 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 190 258 1.3E-11 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Atc_m003 3b1b28fb29bf34f3cff59118ba427043 267 Gene3D G3DSA:3.30.1150.10 100 260 1.3E-15 T 13-10-2018 Atc_m003 3b1b28fb29bf34f3cff59118ba427043 267 PRINTS PR01217 Proline rich extensin signature 102 119 5.4E-13 T 13-10-2018 Atc_m003 3b1b28fb29bf34f3cff59118ba427043 267 PRINTS PR01217 Proline rich extensin signature 82 98 5.4E-13 T 13-10-2018 Atc_m003 3b1b28fb29bf34f3cff59118ba427043 267 PRINTS PR01217 Proline rich extensin signature 16 28 5.4E-13 T 13-10-2018 Atc_m003 3b1b28fb29bf34f3cff59118ba427043 267 PRINTS PR01217 Proline rich extensin signature 120 145 5.4E-13 T 13-10-2018 Atc_0801 18eb10dea67b7aa5529dd373b10f9bac 460 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 394 447 6.4E-17 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Atc_0801 18eb10dea67b7aa5529dd373b10f9bac 460 SMART SM00849 13 234 9.6E-20 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_0801 18eb10dea67b7aa5529dd373b10f9bac 460 Pfam PF00753 Metallo-beta-lactamase superfamily 13 211 9.5E-15 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_0801 18eb10dea67b7aa5529dd373b10f9bac 460 SMART SM01027 254 380 2.4E-56 T 13-10-2018 IPR022712 Beta-Casp domain Atc_0801 18eb10dea67b7aa5529dd373b10f9bac 460 Gene3D G3DSA:3.40.50.10890 222 406 4.4E-141 T 13-10-2018 Atc_0801 18eb10dea67b7aa5529dd373b10f9bac 460 Gene3D G3DSA:3.60.15.10 6 436 4.4E-141 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_0801 18eb10dea67b7aa5529dd373b10f9bac 460 SUPERFAMILY SSF56281 1 460 2.62E-136 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_0801 18eb10dea67b7aa5529dd373b10f9bac 460 Pfam PF10996 Beta-Casp domain 254 379 1.8E-24 T 13-10-2018 IPR022712 Beta-Casp domain Atc_1269 8dcd0440fab21a80e666d250160a82c4 186 Gene3D G3DSA:1.10.530.10 57 186 5.2E-30 T 13-10-2018 Atc_1269 8dcd0440fab21a80e666d250160a82c4 186 Pfam PF01464 Transglycosylase SLT domain 67 168 8.7E-17 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_1269 8dcd0440fab21a80e666d250160a82c4 186 SUPERFAMILY SSF53955 54 182 6.75E-27 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_1454 a904158f19e7f027809fed26068bb844 243 Pfam PF07238 PilZ domain 121 230 8.0E-7 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Atc_1454 a904158f19e7f027809fed26068bb844 243 Gene3D G3DSA:2.40.10.220 122 236 1.2E-14 T 13-10-2018 Atc_2654 d244fa843996441737940a0b1f774a9b 556 Pfam PF00905 Penicillin binding protein transpeptidase domain 218 517 2.1E-72 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atc_2654 d244fa843996441737940a0b1f774a9b 556 Gene3D G3DSA:3.90.1310.30 28 193 1.8E-32 T 13-10-2018 Atc_2654 d244fa843996441737940a0b1f774a9b 556 SUPERFAMILY SSF56601 144 548 2.91E-91 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_2654 d244fa843996441737940a0b1f774a9b 556 Gene3D G3DSA:3.30.450.330 194 522 8.0E-105 T 13-10-2018 Atc_2654 d244fa843996441737940a0b1f774a9b 556 Pfam PF03717 Penicillin-binding Protein dimerisation domain 32 175 1.3E-10 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Atc_2654 d244fa843996441737940a0b1f774a9b 556 Gene3D G3DSA:3.40.710.10 254 438 8.0E-105 T 13-10-2018 Atc_2654 d244fa843996441737940a0b1f774a9b 556 SUPERFAMILY SSF56519 31 192 4.84E-34 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Atc_0737 ed3d3166aee1e725f4b33c8a1681d6c5 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 72 92 6.5E-34 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atc_0737 ed3d3166aee1e725f4b33c8a1681d6c5 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 10 27 6.5E-34 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atc_0737 ed3d3166aee1e725f4b33c8a1681d6c5 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 122 140 6.5E-34 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atc_0737 ed3d3166aee1e725f4b33c8a1681d6c5 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 96 118 6.5E-34 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atc_0737 ed3d3166aee1e725f4b33c8a1681d6c5 149 Pfam PF02556 Preprotein translocase subunit SecB 3 143 1.5E-53 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atc_0737 ed3d3166aee1e725f4b33c8a1681d6c5 149 Hamap MF_00821 Protein-export protein SecB [secB]. 1 144 31.95 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atc_0737 ed3d3166aee1e725f4b33c8a1681d6c5 149 Gene3D G3DSA:3.10.420.10 1 149 6.7E-55 T 13-10-2018 IPR035958 SecB-like superfamily Atc_0737 ed3d3166aee1e725f4b33c8a1681d6c5 149 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 3 141 3.3E-51 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atc_0737 ed3d3166aee1e725f4b33c8a1681d6c5 149 SUPERFAMILY SSF54611 3 140 1.44E-47 T 13-10-2018 IPR035958 SecB-like superfamily Atc_0942 8a8106a1b13f5daf681a51df26c7985a 115 SUPERFAMILY SSF54913 5 106 1.45E-18 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Atc_0942 8a8106a1b13f5daf681a51df26c7985a 115 Gene3D G3DSA:3.30.70.120 1 108 1.8E-30 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Atc_0942 8a8106a1b13f5daf681a51df26c7985a 115 SMART SM00938 12 107 0.0038 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_0942 8a8106a1b13f5daf681a51df26c7985a 115 Pfam PF00543 Nitrogen regulatory protein P-II 14 107 4.5E-6 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atc_0662 19cebe10f1e255e3e7bbe552aca566dd 528 PIRSF PIRSF006060 452 522 68.0 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_0662 19cebe10f1e255e3e7bbe552aca566dd 528 PIRSF PIRSF006060 1 449 2.9E-56 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_0662 19cebe10f1e255e3e7bbe552aca566dd 528 Pfam PF13520 Amino acid permease 10 418 3.1E-31 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_0662 19cebe10f1e255e3e7bbe552aca566dd 528 Gene3D G3DSA:1.20.1740.10 4 447 3.1E-51 T 13-10-2018 Atc_2p11 60931c4aa3b91c288c31cc073c341cfb 78 Pfam PF09274 ParG 37 71 5.8E-5 T 13-10-2018 IPR015354 DNA partition complex, ParG Atc_2p11 60931c4aa3b91c288c31cc073c341cfb 78 Gene3D G3DSA:1.10.1220.10 19 75 4.0E-6 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Atc_2p11 60931c4aa3b91c288c31cc073c341cfb 78 SUPERFAMILY SSF47598 1 76 2.33E-15 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atc_1743 0a451c15f344c722f1e6be2b9a3e1d3b 323 Gene3D G3DSA:3.10.350.10 267 322 2.4E-6 T 13-10-2018 IPR036779 LysM domain superfamily Atc_1743 0a451c15f344c722f1e6be2b9a3e1d3b 323 SUPERFAMILY SSF53187 43 262 5.96E-50 T 13-10-2018 Atc_1743 0a451c15f344c722f1e6be2b9a3e1d3b 323 SMART SM00646 105 259 8.0E-44 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Atc_1743 0a451c15f344c722f1e6be2b9a3e1d3b 323 Gene3D G3DSA:3.40.630.40 33 266 1.6E-68 T 13-10-2018 Atc_1743 0a451c15f344c722f1e6be2b9a3e1d3b 323 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 45 259 1.1E-47 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Atc_0642 c34af59b8b464c6faa8e8121a7d18916 204 SUPERFAMILY SSF52016 1 196 1.47E-58 T 13-10-2018 Atc_0642 c34af59b8b464c6faa8e8121a7d18916 204 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 187 3.2E-72 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Atc_0642 c34af59b8b464c6faa8e8121a7d18916 204 Pfam PF00694 Aconitase C-terminal domain 1 122 1.2E-34 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Atc_0642 c34af59b8b464c6faa8e8121a7d18916 204 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 40.414 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Atc_0642 c34af59b8b464c6faa8e8121a7d18916 204 Gene3D G3DSA:3.20.19.10 1 179 1.4E-69 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Atc_1993 c42883c27bedbd606f12ad5776c208c7 188 Gene3D G3DSA:3.40.1350.10 77 184 1.0E-8 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Atc_1993 c42883c27bedbd606f12ad5776c208c7 188 SUPERFAMILY SSF52980 78 183 2.32E-24 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Atc_1993 c42883c27bedbd606f12ad5776c208c7 188 Pfam PF04471 Restriction endonuclease 75 180 5.0E-23 T 13-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 Atc_0049 cd81352df34b4446e6449b010a093ff4 456 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 452 5.2E-142 T 13-10-2018 IPR031617 Putative exopolysaccharide exporter Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 SUPERFAMILY SSF53720 27 427 1.1E-82 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 1.3E-155 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 Gene3D G3DSA:3.40.50.1980 234 350 1.3E-125 T 13-10-2018 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 Pfam PF00815 Histidinol dehydrogenase 29 427 8.2E-161 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 PIRSF PIRSF000099 1 429 1.4E-154 T 13-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 428 39.966 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 5.7E-84 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 5.7E-84 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 5.7E-84 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 5.7E-84 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 5.7E-84 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 5.7E-84 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 5.7E-84 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 5.7E-84 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 Gene3D G3DSA:3.40.50.1980 30 232 1.3E-125 T 13-10-2018 Atc_0355 6a55339790ef4c065f6370ec5c08e5be 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 13-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Atc_0885 779f46058c868550be39fdf9ec1f22d9 290 SUPERFAMILY SSF81345 3 256 1.14E-27 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Atc_0885 779f46058c868550be39fdf9ec1f22d9 290 Gene3D G3DSA:1.10.3470.10 6 259 2.2E-6 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Atc_0885 779f46058c868550be39fdf9ec1f22d9 290 Pfam PF00950 ABC 3 transport family 5 252 6.9E-35 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Atc_2597 d928b66e6834ba012bf60c513f349d98 172 Gene3D G3DSA:3.40.50.150 1 170 4.7E-54 T 13-10-2018 Atc_2597 d928b66e6834ba012bf60c513f349d98 172 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 1 170 1.3E-42 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Atc_2597 d928b66e6834ba012bf60c513f349d98 172 SUPERFAMILY SSF53335 1 168 1.77E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2597 d928b66e6834ba012bf60c513f349d98 172 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 170 22.807 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Atc_2597 d928b66e6834ba012bf60c513f349d98 172 Pfam PF02390 Putative methyltransferase 1 165 1.1E-46 T 13-10-2018 Atc_1326 4ea0f554f2ba54ab86d1e48e260a9c91 323 SUPERFAMILY SSF52518 1 180 9.68E-60 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Atc_1326 4ea0f554f2ba54ab86d1e48e260a9c91 323 Pfam PF02779 Transketolase, pyrimidine binding domain 2 174 4.5E-40 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atc_1326 4ea0f554f2ba54ab86d1e48e260a9c91 323 Gene3D G3DSA:3.40.50.920 187 321 7.4E-39 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atc_1326 4ea0f554f2ba54ab86d1e48e260a9c91 323 SMART SM00861 1 176 2.6E-55 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atc_1326 4ea0f554f2ba54ab86d1e48e260a9c91 323 Gene3D G3DSA:3.40.50.970 1 186 2.1E-73 T 13-10-2018 Atc_1326 4ea0f554f2ba54ab86d1e48e260a9c91 323 Pfam PF02780 Transketolase, C-terminal domain 192 312 3.8E-31 T 13-10-2018 IPR033248 Transketolase, C-terminal domain Atc_1326 4ea0f554f2ba54ab86d1e48e260a9c91 323 SUPERFAMILY SSF52922 188 320 6.54E-31 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atc_0186 ca4e74c49e4ed7c9c2bf4a5fc34733c3 212 Gene3D G3DSA:1.20.120.80 25 211 2.4E-37 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0186 ca4e74c49e4ed7c9c2bf4a5fc34733c3 212 SUPERFAMILY SSF81452 28 209 1.7E-37 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_0186 ca4e74c49e4ed7c9c2bf4a5fc34733c3 212 Pfam PF00510 Cytochrome c oxidase subunit III 31 209 1.9E-12 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2768 0a1ef9e8596ba353b3cf91c6cbcc7431 461 Pfam PF03573 outer membrane porin, OprD family 28 292 1.3E-11 T 13-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 Atc_2768 0a1ef9e8596ba353b3cf91c6cbcc7431 461 Gene3D G3DSA:2.40.160.10 33 461 3.3E-24 T 13-10-2018 IPR023614 Porin domain superfamily Atc_1446 9c1d84184090fbcf4801a76ced87649c 317 SMART SM00260 17 160 2.2E-19 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atc_1446 9c1d84184090fbcf4801a76ced87649c 317 SMART SM00448 186 311 1.1E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1446 9c1d84184090fbcf4801a76ced87649c 317 SUPERFAMILY SSF52172 187 315 2.42E-23 T 13-10-2018 IPR011006 CheY-like superfamily Atc_1446 9c1d84184090fbcf4801a76ced87649c 317 Gene3D G3DSA:3.40.50.2300 171 317 8.0E-24 T 13-10-2018 Atc_1446 9c1d84184090fbcf4801a76ced87649c 317 Pfam PF01584 CheW-like domain 21 163 1.3E-32 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atc_1446 9c1d84184090fbcf4801a76ced87649c 317 Pfam PF00072 Response regulator receiver domain 188 310 9.3E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_1446 9c1d84184090fbcf4801a76ced87649c 317 SUPERFAMILY SSF50341 16 164 1.2E-28 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Atc_1446 9c1d84184090fbcf4801a76ced87649c 317 Gene3D G3DSA:2.40.50.180 45 160 5.2E-24 T 13-10-2018 Atc_1446 9c1d84184090fbcf4801a76ced87649c 317 Gene3D G3DSA:2.30.30.40 36 154 5.2E-24 T 13-10-2018 Atc_1446 9c1d84184090fbcf4801a76ced87649c 317 PIRSF PIRSF002867 1 317 3.4E-94 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV Atc_1360 c86d0f63549010c9af649fffd97188a0 275 Gene3D G3DSA:3.90.730.10 35 274 5.3E-58 T 13-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 Atc_1360 c86d0f63549010c9af649fffd97188a0 275 Pfam PF00445 Ribonuclease T2 family 46 223 5.2E-11 T 13-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 Atc_1360 c86d0f63549010c9af649fffd97188a0 275 SUPERFAMILY SSF55895 43 256 5.1E-21 T 13-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 Atc_2590 103cdec0c2bb9724e74c6baf5f6eddb8 387 Gene3D G3DSA:3.30.870.10 21 193 1.3E-19 T 13-10-2018 Atc_2590 103cdec0c2bb9724e74c6baf5f6eddb8 387 SMART SM00155 118 145 120.0 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Atc_2590 103cdec0c2bb9724e74c6baf5f6eddb8 387 SMART SM00155 290 317 0.012 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Atc_2590 103cdec0c2bb9724e74c6baf5f6eddb8 387 SUPERFAMILY SSF56024 6 176 1.22E-24 T 13-10-2018 Atc_2590 103cdec0c2bb9724e74c6baf5f6eddb8 387 Pfam PF13091 PLD-like domain 218 331 2.1E-23 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atc_2590 103cdec0c2bb9724e74c6baf5f6eddb8 387 Pfam PF13091 PLD-like domain 36 143 6.0E-7 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atc_2590 103cdec0c2bb9724e74c6baf5f6eddb8 387 SUPERFAMILY SSF56024 196 364 2.92E-35 T 13-10-2018 Atc_2590 103cdec0c2bb9724e74c6baf5f6eddb8 387 Gene3D G3DSA:3.30.870.10 199 375 5.5E-23 T 13-10-2018 Atc_2408 2a1b525426bc56948081262959dae032 926 Pfam PF04185 Phosphoesterase family 501 788 1.9E-7 T 13-10-2018 IPR007312 Phosphoesterase GO:0016788 Atc_2408 2a1b525426bc56948081262959dae032 926 Gene3D G3DSA:2.130.10.10 290 410 1.9E-16 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_2408 2a1b525426bc56948081262959dae032 926 Gene3D G3DSA:2.130.10.10 124 289 2.8E-15 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_2408 2a1b525426bc56948081262959dae032 926 SUPERFAMILY SSF50974 91 393 2.41E-30 T 13-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 Atc_2408 2a1b525426bc56948081262959dae032 926 Gene3D G3DSA:3.40.720.10 503 808 2.7E-8 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atc_m154 509506d5b8de347182a5d3c3241326e4 293 Pfam PF10263 SprT-like family 18 123 3.8E-9 T 13-10-2018 IPR006640 SprT-like Atc_1355 39f12b4eebf754a5ca0018f326ea71ba 337 SUPERFAMILY SSF53850 28 326 2.22E-43 T 13-10-2018 Atc_1355 39f12b4eebf754a5ca0018f326ea71ba 337 Gene3D G3DSA:3.40.190.10 40 303 2.0E-41 T 13-10-2018 Atc_1355 39f12b4eebf754a5ca0018f326ea71ba 337 Gene3D G3DSA:3.40.190.10 129 315 2.0E-41 T 13-10-2018 Atc_1355 39f12b4eebf754a5ca0018f326ea71ba 337 Pfam PF13416 Bacterial extracellular solute-binding protein 40 300 8.5E-23 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atc_m222 90c89efcdc5d2de6aa05d5d0e4ed05ac 90 Pfam PF13518 Helix-turn-helix domain 6 57 8.1E-9 T 13-10-2018 Atc_m222 90c89efcdc5d2de6aa05d5d0e4ed05ac 90 SUPERFAMILY SSF46689 2 87 4.66E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0439 69a31594559837205a1d6cb552f4538f 554 Gene3D G3DSA:1.20.1530.20 4 397 1.2E-13 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Atc_0439 69a31594559837205a1d6cb552f4538f 554 Pfam PF00999 Sodium/hydrogen exchanger family 8 393 1.4E-64 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Atc_2517 0fbc97a590c5f5d88eb490951253531f 247 SUPERFAMILY SSF51735 6 239 2.78E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2517 0fbc97a590c5f5d88eb490951253531f 247 Gene3D G3DSA:3.40.50.720 2 243 4.3E-42 T 13-10-2018 Atc_2517 0fbc97a590c5f5d88eb490951253531f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 8.4E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2517 0fbc97a590c5f5d88eb490951253531f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 8.4E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2517 0fbc97a590c5f5d88eb490951253531f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 8.4E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2517 0fbc97a590c5f5d88eb490951253531f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 8.4E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2517 0fbc97a590c5f5d88eb490951253531f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 8.4E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2517 0fbc97a590c5f5d88eb490951253531f 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 238 3.3E-40 T 13-10-2018 Atc_1901 b2d570b3a46a44708f1eb2784f46246e 59 SUPERFAMILY SSF52833 2 50 1.18E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0552 b2d570b3a46a44708f1eb2784f46246e 59 SUPERFAMILY SSF52833 2 50 1.18E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_2171 d03a989c03dadb2d3a149071d3e661a4 269 SUPERFAMILY SSF51366 1 247 6.12E-87 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atc_2171 d03a989c03dadb2d3a149071d3e661a4 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 12 253 4.8E-72 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atc_2171 d03a989c03dadb2d3a149071d3e661a4 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 46 59 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atc_2171 d03a989c03dadb2d3a149071d3e661a4 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 12 260 33.326 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atc_2171 d03a989c03dadb2d3a149071d3e661a4 269 Pfam PF00290 Tryptophan synthase alpha chain 11 255 1.9E-81 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atc_2171 d03a989c03dadb2d3a149071d3e661a4 269 Gene3D G3DSA:3.20.20.70 1 267 2.8E-92 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0958 3efb514117bdb821bf33f75f5b4876fb 325 SUPERFAMILY SSF117782 92 164 4.45E-9 T 13-10-2018 IPR035439 UPF0145 domain superfamily Atc_0958 3efb514117bdb821bf33f75f5b4876fb 325 Gene3D G3DSA:3.30.110.70 92 165 3.2E-6 T 13-10-2018 Atc_0958 3efb514117bdb821bf33f75f5b4876fb 325 Pfam PF01906 Putative heavy-metal-binding 110 161 6.6E-6 T 13-10-2018 IPR002765 Uncharacterised protein family UPF0145 Atc_2333 82161553ffa39b2d016bf273dfc497ef 272 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 185 268 1.3E-27 T 13-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Atc_2333 82161553ffa39b2d016bf273dfc497ef 272 Gene3D G3DSA:3.40.50.300 23 190 4.4E-30 T 13-10-2018 Atc_2333 82161553ffa39b2d016bf273dfc497ef 272 Pfam PF07728 AAA domain (dynein-related subfamily) 38 172 3.3E-33 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Atc_2333 82161553ffa39b2d016bf273dfc497ef 272 SUPERFAMILY SSF52540 30 229 5.78E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0198 5cffd98a09755b7ff33bc8d1209eccd4 337 SMART SM00283 28 235 1.0E-4 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atc_0198 5cffd98a09755b7ff33bc8d1209eccd4 337 SUPERFAMILY SSF58104 32 220 5.1E-41 T 13-10-2018 Atc_0198 5cffd98a09755b7ff33bc8d1209eccd4 337 Gene3D G3DSA:1.10.287.950 21 244 1.1E-38 T 13-10-2018 Atc_0198 5cffd98a09755b7ff33bc8d1209eccd4 337 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 102 200 6.7E-24 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atc_0198 5cffd98a09755b7ff33bc8d1209eccd4 337 Pfam PF13682 Chemoreceptor zinc-binding domain 238 300 1.1E-12 T 13-10-2018 IPR025991 Chemoreceptor zinc-binding domain Atc_3p16 14140cfdf8dbec971e0b072035cca92e 131 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 128 9.556 T 13-10-2018 IPR022907 VapC family GO:0004540 Atc_3p16 14140cfdf8dbec971e0b072035cca92e 131 SUPERFAMILY SSF88723 1 120 2.8E-15 T 13-10-2018 IPR029060 PIN-like domain superfamily Atc_3p16 14140cfdf8dbec971e0b072035cca92e 131 Pfam PF01850 PIN domain 4 120 2.1E-7 T 13-10-2018 IPR002716 PIN domain Atc_0342 1068a8814c56dd970d8815266ab4a4d2 453 Gene3D G3DSA:1.20.1600.10 32 438 2.8E-26 T 13-10-2018 Atc_0342 1068a8814c56dd970d8815266ab4a4d2 453 Pfam PF02321 Outer membrane efflux protein 259 428 1.3E-14 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_0342 1068a8814c56dd970d8815266ab4a4d2 453 SUPERFAMILY SSF56954 10 435 9.55E-34 T 13-10-2018 Atc_2659 ff5099e8c70244cb2f1ea720d0d52e56 390 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 16 372 1.6E-122 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2659 ff5099e8c70244cb2f1ea720d0d52e56 390 Pfam PF01098 Cell cycle protein 18 372 1.2E-97 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atc_2463 2ddd434536d40d86fc3a1bbf4438e1e8 127 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 13 101 2.0E-7 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Atc_2463 2ddd434536d40d86fc3a1bbf4438e1e8 127 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 9 114 19.949 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Atc_2463 2ddd434536d40d86fc3a1bbf4438e1e8 127 ProSitePatterns PS01319 Ribosome-binding factor A signature. 80 101 - T 13-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Atc_2463 2ddd434536d40d86fc3a1bbf4438e1e8 127 SUPERFAMILY SSF89919 8 116 6.41E-24 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Atc_2463 2ddd434536d40d86fc3a1bbf4438e1e8 127 Gene3D G3DSA:3.30.300.20 9 104 1.4E-19 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Atc_2463 2ddd434536d40d86fc3a1bbf4438e1e8 127 Pfam PF02033 Ribosome-binding factor A 10 114 4.8E-20 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Atc_0888 2fefa6b22b995648431136a00f850854 412 Pfam PF07690 Major Facilitator Superfamily 30 365 1.6E-37 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_0888 2fefa6b22b995648431136a00f850854 412 SUPERFAMILY SSF103473 14 400 3.66E-59 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_0888 2fefa6b22b995648431136a00f850854 412 Gene3D G3DSA:1.20.1250.20 15 205 5.5E-23 T 13-10-2018 Atc_0888 2fefa6b22b995648431136a00f850854 412 Gene3D G3DSA:1.20.1250.20 222 401 5.4E-19 T 13-10-2018 Atc_0467 b7f7a74895c75bf8e86a6225ced20b28 290 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 189 195 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_0467 b7f7a74895c75bf8e86a6225ced20b28 290 SUPERFAMILY SSF53335 14 265 9.65E-57 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0467 b7f7a74895c75bf8e86a6225ced20b28 290 Pfam PF05175 Methyltransferase small domain 111 199 6.2E-16 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Atc_0467 b7f7a74895c75bf8e86a6225ced20b28 290 Gene3D G3DSA:3.40.50.150 93 283 1.1E-51 T 13-10-2018 Atc_0467 b7f7a74895c75bf8e86a6225ced20b28 290 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 31 278 1.1E-76 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Atc_0467 b7f7a74895c75bf8e86a6225ced20b28 290 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 280 1.7E-66 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Atc_0467 b7f7a74895c75bf8e86a6225ced20b28 290 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 10 282 39.878 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Atc_0467 b7f7a74895c75bf8e86a6225ced20b28 290 Gene3D G3DSA:1.10.8.10 9 92 7.6E-18 T 13-10-2018 Atc_1p05 9ac87cd1925cd4780c1d01994b357dd0 292 Pfam PF06504 Replication protein C (RepC) 3 274 3.4E-155 T 13-10-2018 IPR010522 Replication protein C, bacterial Atc_0019 aa826d0ac2688a9d262ebc519a528b16 176 Gene3D G3DSA:3.40.980.10 4 172 5.7E-46 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atc_0019 aa826d0ac2688a9d262ebc519a528b16 176 SMART SM00852 15 159 1.1E-28 T 13-10-2018 IPR001453 MoaB/Mog domain Atc_0019 aa826d0ac2688a9d262ebc519a528b16 176 Pfam PF00994 Probable molybdopterin binding domain 15 157 7.6E-31 T 13-10-2018 IPR001453 MoaB/Mog domain Atc_0019 aa826d0ac2688a9d262ebc519a528b16 176 PIRSF PIRSF006443 1 167 1.4E-56 T 13-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 Atc_0019 aa826d0ac2688a9d262ebc519a528b16 176 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 14 154 1.1E-30 T 13-10-2018 IPR001453 MoaB/Mog domain Atc_0019 aa826d0ac2688a9d262ebc519a528b16 176 SUPERFAMILY SSF53218 7 158 5.76E-41 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atc_0911 a846188bc83ef52154ae9127266bfce9 381 PIRSF PIRSF006487 1 372 1.1E-70 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Atc_0911 a846188bc83ef52154ae9127266bfce9 381 SUPERFAMILY SSF101790 279 366 1.46E-17 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Atc_0911 a846188bc83ef52154ae9127266bfce9 381 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 270 359 1.0E-14 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Atc_0911 a846188bc83ef52154ae9127266bfce9 381 Gene3D G3DSA:4.10.1250.10 239 283 4.4E-14 T 13-10-2018 Atc_0911 a846188bc83ef52154ae9127266bfce9 381 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 260 1.1E-71 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Atc_0911 a846188bc83ef52154ae9127266bfce9 381 Gene3D G3DSA:3.30.70.1400 54 148 5.4E-71 T 13-10-2018 Atc_0911 a846188bc83ef52154ae9127266bfce9 381 SUPERFAMILY SSF103025 6 284 4.87E-77 T 13-10-2018 Atc_0911 a846188bc83ef52154ae9127266bfce9 381 Gene3D G3DSA:2.40.30.110 285 375 3.2E-17 T 13-10-2018 Atc_0911 a846188bc83ef52154ae9127266bfce9 381 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 364 1.3E-92 T 13-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Atc_0911 a846188bc83ef52154ae9127266bfce9 381 Gene3D G3DSA:3.30.1360.120 9 238 5.4E-71 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atc_0403 15125166585f4058c2c8012a54befb32 351 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 31 149 2.3E-11 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atc_0403 15125166585f4058c2c8012a54befb32 351 Gene3D G3DSA:1.10.1670.10 5 206 6.2E-72 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Atc_0403 15125166585f4058c2c8012a54befb32 351 SUPERFAMILY SSF55811 221 350 3.87E-17 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atc_0403 15125166585f4058c2c8012a54befb32 351 SMART SM00478 34 185 6.3E-31 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atc_0403 15125166585f4058c2c8012a54befb32 351 Pfam PF14815 NUDIX domain 231 349 1.5E-18 T 13-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Atc_0403 15125166585f4058c2c8012a54befb32 351 Gene3D G3DSA:1.10.340.30 16 127 6.2E-72 T 13-10-2018 Atc_0403 15125166585f4058c2c8012a54befb32 351 SUPERFAMILY SSF48150 2 208 1.37E-62 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Atc_0403 15125166585f4058c2c8012a54befb32 351 Gene3D G3DSA:3.90.79.10 220 351 2.3E-13 T 13-10-2018 Atc_2548 7ee9440fc054f281f2577e9493305957 104 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 5 104 20.816 T 13-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Atc_2548 7ee9440fc054f281f2577e9493305957 104 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 99 2.9E-23 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Atc_m057 f1eee4e246c23881fec30f24f77508a6 287 Gene3D G3DSA:3.40.50.300 13 210 3.8E-23 T 13-10-2018 Atc_m057 f1eee4e246c23881fec30f24f77508a6 287 SUPERFAMILY SSF52540 16 243 6.1E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1407 3e6ebc6be8e09ea57a668e4a5ea19293 154 Pfam PF10975 Protein of unknown function (DUF2802) 28 143 1.1E-11 T 13-10-2018 IPR021244 Protein of unknown function DUF2802 Atc_1340 59410245cd5b323054a98b715fcbfcf4 211 SUPERFAMILY SSF54001 74 194 1.96E-40 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Atc_1340 59410245cd5b323054a98b715fcbfcf4 211 Pfam PF00877 NlpC/P60 family 86 192 1.8E-28 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Atc_1340 59410245cd5b323054a98b715fcbfcf4 211 Gene3D G3DSA:3.90.1720.10 38 187 4.1E-40 T 13-10-2018 Atc_1408 d9e1dad75a0de807bd7fd50efaa87170 406 Pfam PF02120 Flagellar hook-length control protein FliK 342 403 1.4E-8 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Atc_1174 dac921d2602672206bafd5c12ed81f43 316 Pfam PF00437 Type II/IV secretion system protein 11 250 1.2E-21 T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_1174 dac921d2602672206bafd5c12ed81f43 316 SUPERFAMILY SSF52540 63 270 2.01E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1174 dac921d2602672206bafd5c12ed81f43 316 Gene3D G3DSA:3.40.50.300 87 309 1.1E-38 T 13-10-2018 Atc_1736 23791abb45d6dae66e423c38d61cb325 152 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 152 16.711 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atc_1736 23791abb45d6dae66e423c38d61cb325 152 ProSitePatterns PS00855 Signal peptidases II signature. 97 109 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atc_1736 23791abb45d6dae66e423c38d61cb325 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 46 54 1.2E-19 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atc_1736 23791abb45d6dae66e423c38d61cb325 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 94 109 1.2E-19 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atc_1736 23791abb45d6dae66e423c38d61cb325 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 130 146 1.2E-19 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atc_1736 23791abb45d6dae66e423c38d61cb325 152 TIGRFAM TIGR00077 lspA: signal peptidase II 3 149 2.8E-37 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atc_1736 23791abb45d6dae66e423c38d61cb325 152 Pfam PF01252 Signal peptidase (SPase) II 8 149 3.8E-39 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atc_1132 8ac72a3d186bb349c8d61a6991a63d90 115 SUPERFAMILY SSF159941 17 94 5.75E-18 T 13-10-2018 IPR024047 MM3350-like superfamily Atc_1132 8ac72a3d186bb349c8d61a6991a63d90 115 Gene3D G3DSA:3.10.290.30 14 95 1.1E-18 T 13-10-2018 IPR024047 MM3350-like superfamily Atc_1132 8ac72a3d186bb349c8d61a6991a63d90 115 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 18 92 8.2E-20 T 13-10-2018 IPR012912 Plasmid pRiA4b, Orf3 Atc_0872 b32b7fdf32b86690959642062906f5e1 456 Pfam PF02754 Cysteine-rich domain 215 300 6.0E-7 T 13-10-2018 IPR004017 Cysteine-rich domain Atc_1703 46fa06f37819af42b3325668929d397b 238 SMART SM00478 36 198 9.6E-24 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atc_1703 46fa06f37819af42b3325668929d397b 238 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 32 172 3.1E-14 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atc_1703 46fa06f37819af42b3325668929d397b 238 Gene3D G3DSA:1.10.1670.10 10 217 6.8E-55 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Atc_1703 46fa06f37819af42b3325668929d397b 238 PIRSF PIRSF001435 2 223 5.5E-64 T 13-10-2018 Atc_1703 46fa06f37819af42b3325668929d397b 238 SUPERFAMILY SSF48150 6 217 2.04E-49 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Atc_1703 46fa06f37819af42b3325668929d397b 238 Gene3D G3DSA:1.10.340.30 23 146 6.8E-55 T 13-10-2018 Atc_2775 f6073a8ea236c89474c3ac7446266ff3 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 25 139 1.0E-8 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atc_2775 f6073a8ea236c89474c3ac7446266ff3 165 SUPERFAMILY SSF55083 23 115 9.16E-10 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atc_2775 f6073a8ea236c89474c3ac7446266ff3 165 Gene3D G3DSA:3.30.70.560 23 143 1.6E-5 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atc_0371 6d5641277adb5d2fca55676648670bc1 241 SMART SM00382 29 216 1.3E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0371 6d5641277adb5d2fca55676648670bc1 241 Pfam PF00005 ABC transporter 21 166 3.5E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_0371 6d5641277adb5d2fca55676648670bc1 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_0371 6d5641277adb5d2fca55676648670bc1 241 SUPERFAMILY SSF52540 5 236 2.0E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0371 6d5641277adb5d2fca55676648670bc1 241 Gene3D G3DSA:3.40.50.300 3 241 3.3E-68 T 13-10-2018 Atc_0371 6d5641277adb5d2fca55676648670bc1 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 9.5E-6 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Atc_0371 6d5641277adb5d2fca55676648670bc1 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 5 240 6.3E-111 T 13-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 130 150 2.7E-36 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 235 252 2.7E-36 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 2.7E-36 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 195 219 2.7E-36 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 170 194 2.7E-36 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 54 81 2.7E-36 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 319 32.941 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 Gene3D G3DSA:3.40.50.720 1 184 3.0E-40 T 13-10-2018 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 SUPERFAMILY SSF48179 177 326 2.04E-48 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 SUPERFAMILY SSF51735 6 174 3.43E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 PIRSF PIRSF000114 2 327 6.7E-81 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 177 316 4.9E-46 T 13-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 185 206 - T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 6 155 2.7E-27 T 13-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atc_0738 a277b68f535e9a5c30f6d917b54a9a59 338 Gene3D G3DSA:1.10.1040.10 186 331 2.3E-47 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atc_1954 d04182f6ae23c2e9af99a13cd45e706e 256 Gene3D G3DSA:3.60.15.10 1 254 6.5E-78 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_1954 d04182f6ae23c2e9af99a13cd45e706e 256 SUPERFAMILY SSF56281 4 252 1.23E-45 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_1954 d04182f6ae23c2e9af99a13cd45e706e 256 SMART SM00849 36 225 3.5E-4 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_1954 d04182f6ae23c2e9af99a13cd45e706e 256 Pfam PF12706 Beta-lactamase superfamily domain 49 226 7.3E-41 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_2563 48ec266157ede7a5dbab6322377d5e36 603 Gene3D G3DSA:3.20.20.60 136 203 2.2E-16 T 13-10-2018 Atc_2563 48ec266157ede7a5dbab6322377d5e36 603 Gene3D G3DSA:3.20.20.60 421 582 1.4E-56 T 13-10-2018 Atc_2563 48ec266157ede7a5dbab6322377d5e36 603 SUPERFAMILY SSF50800 324 419 3.31E-10 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Atc_2563 48ec266157ede7a5dbab6322377d5e36 603 Pfam PF00224 Pyruvate kinase, barrel domain 351 587 2.6E-34 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_2563 48ec266157ede7a5dbab6322377d5e36 603 Pfam PF00224 Pyruvate kinase, barrel domain 134 209 8.9E-5 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_2563 48ec266157ede7a5dbab6322377d5e36 603 Gene3D G3DSA:2.40.33.10 325 420 1.4E-56 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atc_2563 48ec266157ede7a5dbab6322377d5e36 603 SUPERFAMILY SSF51621 118 592 9.14E-59 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atc_0070 859cfc3e20fe077b0c16f23b441b9ce2 315 Gene3D G3DSA:3.40.190.90 112 266 1.1E-113 T 13-10-2018 Atc_0070 859cfc3e20fe077b0c16f23b441b9ce2 315 Gene3D G3DSA:3.30.540.10 9 309 1.1E-113 T 13-10-2018 Atc_0070 859cfc3e20fe077b0c16f23b441b9ce2 315 SUPERFAMILY SSF56655 2 313 2.32E-81 T 13-10-2018 Atc_0070 859cfc3e20fe077b0c16f23b441b9ce2 315 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 5 310 1.2E-116 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Atc_0070 859cfc3e20fe077b0c16f23b441b9ce2 315 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 5 311 3.7E-95 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Atc_0070 859cfc3e20fe077b0c16f23b441b9ce2 315 PIRSF PIRSF004532 3 315 1.6E-115 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Atc_0239 c33806dfec017f012fbdcf2d2c5ec2c1 306 Pfam PF09991 Predicted membrane protein (DUF2232) 24 292 2.7E-16 T 13-10-2018 IPR018710 Protein of unknown function DUF2232 Atc_0330 347963416649db7ffd46165a529edd80 314 Pfam PF00294 pfkB family carbohydrate kinase 34 292 3.3E-39 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Atc_0330 347963416649db7ffd46165a529edd80 314 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Atc_0330 347963416649db7ffd46165a529edd80 314 SUPERFAMILY SSF53613 3 297 1.14E-63 T 13-10-2018 IPR029056 Ribokinase-like Atc_0330 347963416649db7ffd46165a529edd80 314 Gene3D G3DSA:3.40.1190.20 1 312 2.6E-107 T 13-10-2018 IPR029056 Ribokinase-like Atc_1584 ed382a8b0b03e6622a25520f0123b927 484 PIRSF PIRSF006446 4 466 2.3E-129 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_1584 ed382a8b0b03e6622a25520f0123b927 484 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 11 447 1.7E-137 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_2143 3c250f596e2caf267ac2ebd7efadfc7d 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 269 2.5E-29 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_2143 3c250f596e2caf267ac2ebd7efadfc7d 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 357 1.5E-78 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_2143 3c250f596e2caf267ac2ebd7efadfc7d 364 Gene3D G3DSA:1.10.287.470 103 162 7.8E-75 T 13-10-2018 Atc_2143 3c250f596e2caf267ac2ebd7efadfc7d 364 SUPERFAMILY SSF111369 61 274 4.32E-46 T 13-10-2018 Atc_2143 3c250f596e2caf267ac2ebd7efadfc7d 364 Gene3D G3DSA:2.40.50.100 68 196 7.8E-75 T 13-10-2018 Atc_2143 3c250f596e2caf267ac2ebd7efadfc7d 364 Gene3D G3DSA:2.40.30.170 58 279 7.8E-75 T 13-10-2018 Atc_2143 3c250f596e2caf267ac2ebd7efadfc7d 364 Gene3D G3DSA:2.40.420.20 280 352 7.8E-75 T 13-10-2018 Atc_1659 1588ca0166670ab84e914d0f511cef49 140 SUPERFAMILY SSF46785 2 121 2.26E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_1659 1588ca0166670ab84e914d0f511cef49 140 Pfam PF03551 Transcriptional regulator PadR-like family 6 74 6.3E-17 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal Atc_1659 1588ca0166670ab84e914d0f511cef49 140 Gene3D G3DSA:1.10.10.10 1 101 2.1E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2075 e1412d3d4d0bf0fe36018c1b1d8304e8 63 Gene3D G3DSA:1.10.340.50 1 51 5.4E-10 T 13-10-2018 Atc_m019 53c6b4e83caaea08da703887d515858f 327 Pfam PF01609 Transposase DDE domain 191 318 6.9E-6 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_m019 53c6b4e83caaea08da703887d515858f 327 Pfam PF05598 Transposase domain (DUF772) 54 124 1.9E-13 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1753 26896f8406f0f2214b203993056d7800 290 SUPERFAMILY SSF53850 22 226 3.81E-17 T 13-10-2018 Atc_1753 26896f8406f0f2214b203993056d7800 290 Gene3D G3DSA:3.40.190.10 28 222 1.4E-17 T 13-10-2018 Atc_1753 26896f8406f0f2214b203993056d7800 290 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 19 247 4.9E-40 T 13-10-2018 Atc_1753 26896f8406f0f2214b203993056d7800 290 Gene3D G3DSA:3.40.190.10 94 198 1.4E-17 T 13-10-2018 Atc_0806 6fff316cd8640fcec61c1af6f786f0bc 341 Gene3D G3DSA:3.75.10.10 2 341 3.9E-122 T 13-10-2018 Atc_0806 6fff316cd8640fcec61c1af6f786f0bc 341 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 5 340 3.8E-114 T 13-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 Atc_0806 6fff316cd8640fcec61c1af6f786f0bc 341 SUPERFAMILY SSF55909 1 340 3.57E-120 T 13-10-2018 Atc_1172 044b018f814c93796cb4252609195225 366 Gene3D G3DSA:1.20.81.30 13 139 4.1E-20 T 13-10-2018 Atc_1172 044b018f814c93796cb4252609195225 366 Pfam PF00482 Type II secretion system (T2SS), protein F 26 158 3.1E-8 T 13-10-2018 IPR018076 Type II secretion system F domain Atc_1172 044b018f814c93796cb4252609195225 366 Pfam PF00482 Type II secretion system (T2SS), protein F 238 354 1.0E-6 T 13-10-2018 IPR018076 Type II secretion system F domain Atc_1172 044b018f814c93796cb4252609195225 366 Gene3D G3DSA:1.20.81.30 223 329 5.7E-5 T 13-10-2018 Atc_2545 fdd725982166e7371de38f08ddc0a275 343 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 13 337 25.711 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2545 fdd725982166e7371de38f08ddc0a275 343 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 218 231 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2545 fdd725982166e7371de38f08ddc0a275 343 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 59 74 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2545 fdd725982166e7371de38f08ddc0a275 343 Pfam PF00146 NADH dehydrogenase 20 330 9.8E-129 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1577 547103fd31af6ec51ac1394dad089a0b 227 Gene3D G3DSA:3.40.50.300 42 224 2.4E-41 T 13-10-2018 Atc_1577 547103fd31af6ec51ac1394dad089a0b 227 PIRSF PIRSF003073 1 225 7.8E-71 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atc_1577 547103fd31af6ec51ac1394dad089a0b 227 SMART SM00382 78 211 0.0014 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_1577 547103fd31af6ec51ac1394dad089a0b 227 SUPERFAMILY SSF52540 46 212 5.33E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1577 547103fd31af6ec51ac1394dad089a0b 227 Pfam PF01695 IstB-like ATP binding protein 35 210 2.4E-60 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atc_1671 92ce8e146e723a6401e22bcb506a4f1e 271 SUPERFAMILY SSF53850 58 258 2.64E-43 T 13-10-2018 Atc_1671 92ce8e146e723a6401e22bcb506a4f1e 271 Gene3D G3DSA:3.40.190.290 58 266 1.8E-40 T 13-10-2018 Atc_1671 92ce8e146e723a6401e22bcb506a4f1e 271 Pfam PF03466 LysR substrate binding domain 56 258 1.4E-46 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_0170 41c7d9928805281fa2869efc5f328711 784 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 226 689 3.4E-102 T 13-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Atc_0170 41c7d9928805281fa2869efc5f328711 784 SUPERFAMILY SSF52540 217 687 3.08E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0170 41c7d9928805281fa2869efc5f328711 784 Gene3D G3DSA:3.40.50.300 414 689 3.3E-45 T 13-10-2018 Atc_0874 beeea28826b3abab7f129c66eebd7c5c 138 Pfam PF02915 Rubrerythrin 11 133 1.8E-28 T 13-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Atc_0874 beeea28826b3abab7f129c66eebd7c5c 138 SUPERFAMILY SSF47240 3 137 3.42E-40 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_0874 beeea28826b3abab7f129c66eebd7c5c 138 Gene3D G3DSA:1.20.1260.10 1 137 6.3E-52 T 13-10-2018 IPR012347 Ferritin-like Atc_0258 86bd51d0400c132c5f2244f63cbef55b 245 Gene3D G3DSA:1.10.150.690 32 118 4.5E-16 T 13-10-2018 Atc_0258 86bd51d0400c132c5f2244f63cbef55b 245 Pfam PF09836 Putative DNA-binding domain 9 91 2.3E-9 T 13-10-2018 IPR018640 Putative DNA-binding domain, bacteria Atc_2019 11ed5f542ba5fac501c3a43cba09fca9 584 Gene3D G3DSA:3.40.50.300 354 583 2.8E-20 T 13-10-2018 Atc_2019 11ed5f542ba5fac501c3a43cba09fca9 584 Gene3D G3DSA:3.40.50.300 81 209 1.4E-10 T 13-10-2018 Atc_2019 11ed5f542ba5fac501c3a43cba09fca9 584 SUPERFAMILY SSF52540 88 583 8.83E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2019 11ed5f542ba5fac501c3a43cba09fca9 584 Pfam PF12696 TraM recognition site of TraD and TraG 433 561 1.7E-8 T 13-10-2018 IPR032689 TraD/TraG, TraM recognition site Atc_2019 11ed5f542ba5fac501c3a43cba09fca9 584 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 131 275 1.2E-5 T 13-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain Atc_2019 11ed5f542ba5fac501c3a43cba09fca9 584 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 4 582 3.1E-156 T 13-10-2018 IPR022458 Conjugative coupling factor TraG/TraD Atc_1057 e2f517447e8ea6ea0519be18a06873a4 218 Pfam PF03243 Alkylmercury lyase 79 178 6.0E-12 T 13-10-2018 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 Atc_1057 e2f517447e8ea6ea0519be18a06873a4 218 SUPERFAMILY SSF160387 85 204 1.6E-14 T 13-10-2018 Atc_1057 e2f517447e8ea6ea0519be18a06873a4 218 Gene3D G3DSA:2.40.10.490 23 203 3.8E-20 T 13-10-2018 Atc_m177 e591bf1802414557059bd063148737b9 181 Pfam PF13007 Transposase C of IS166 homeodomain 61 143 4.9E-21 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain Atc_m249 e591bf1802414557059bd063148737b9 181 Pfam PF13007 Transposase C of IS166 homeodomain 61 143 4.9E-21 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain Atc_1953 2efa6137c1f23933bac0cc155c8bbd65 117 Pfam PF13683 Integrase core domain 6 71 1.3E-15 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_1953 2efa6137c1f23933bac0cc155c8bbd65 117 SUPERFAMILY SSF53098 9 77 9.1E-11 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1202 26e343134b5c8fe27aa9b4ee9fb38f68 307 Pfam PF03524 Conjugal transfer protein 71 304 6.4E-30 T 13-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Atc_1202 26e343134b5c8fe27aa9b4ee9fb38f68 307 Gene3D G3DSA:2.60.40.2500 219 306 4.2E-11 T 13-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Atc_1629 f194979d752a9344d080e21e97bb662a 285 Pfam PF01609 Transposase DDE domain 108 273 3.6E-25 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1629 f194979d752a9344d080e21e97bb662a 285 Pfam PF05598 Transposase domain (DUF772) 17 92 2.5E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0159 15460bd360c96719dd3f624f5f700891 229 SUPERFAMILY SSF51735 1 228 5.04E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0159 15460bd360c96719dd3f624f5f700891 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 8.0E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0159 15460bd360c96719dd3f624f5f700891 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 60 71 8.0E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0159 15460bd360c96719dd3f624f5f700891 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 8.0E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0159 15460bd360c96719dd3f624f5f700891 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 8.0E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0159 15460bd360c96719dd3f624f5f700891 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 177 8.0E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0159 15460bd360c96719dd3f624f5f700891 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 212 8.0E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0159 15460bd360c96719dd3f624f5f700891 229 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 2 227 3.7E-46 T 13-10-2018 Atc_0159 15460bd360c96719dd3f624f5f700891 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 60 71 3.7E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0159 15460bd360c96719dd3f624f5f700891 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 128 3.7E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0159 15460bd360c96719dd3f624f5f700891 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 3.7E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_0159 15460bd360c96719dd3f624f5f700891 229 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 127 155 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atc_0159 15460bd360c96719dd3f624f5f700891 229 Gene3D G3DSA:3.40.50.720 1 228 3.1E-59 T 13-10-2018 Atc_0852 f9c9f173c78bc6422d7d69c2e9279d7c 148 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 4 145 34.632 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atc_0852 f9c9f173c78bc6422d7d69c2e9279d7c 148 SUPERFAMILY SSF54637 2 141 2.86E-49 T 13-10-2018 IPR029069 HotDog domain superfamily Atc_0852 f9c9f173c78bc6422d7d69c2e9279d7c 148 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 4 142 1.6E-57 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atc_0852 f9c9f173c78bc6422d7d69c2e9279d7c 148 Gene3D G3DSA:3.10.129.10 1 145 2.4E-60 T 13-10-2018 Atc_0852 f9c9f173c78bc6422d7d69c2e9279d7c 148 Pfam PF07977 FabA-like domain 13 137 1.2E-36 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atc_0357 8a1321b0c88bcf153a2b16d5b3b66ad2 423 Gene3D G3DSA:3.65.10.10 7 413 9.4E-166 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Atc_0357 8a1321b0c88bcf153a2b16d5b3b66ad2 423 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.63 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_0357 8a1321b0c88bcf153a2b16d5b3b66ad2 423 SUPERFAMILY SSF55205 2 417 1.32E-139 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Atc_0357 8a1321b0c88bcf153a2b16d5b3b66ad2 423 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 406 3.2E-105 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Atc_0357 8a1321b0c88bcf153a2b16d5b3b66ad2 423 Gene3D G3DSA:3.65.10.10 21 229 9.4E-166 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Atc_0357 8a1321b0c88bcf153a2b16d5b3b66ad2 423 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 415 1.9E-178 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atc_2755 05a72ce95c706b5f76247df58ecb7bd1 584 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 29 74 9.7E-9 T 13-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal Atc_2045 8b34607cfdddb01b4c63b94cc288c3dd 694 SUPERFAMILY SSF52540 298 663 2.2E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2045 8b34607cfdddb01b4c63b94cc288c3dd 694 Pfam PF00437 Type II/IV secretion system protein 306 582 4.4E-35 T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_2045 8b34607cfdddb01b4c63b94cc288c3dd 694 Gene3D G3DSA:3.40.50.300 410 692 2.7E-66 T 13-10-2018 Atc_0723 3b89c5ffe4eee3f59d484f7694866437 143 Gene3D G3DSA:3.40.50.10110 1 142 3.4E-26 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Atc_0723 3b89c5ffe4eee3f59d484f7694866437 143 Pfam PF04364 DNA polymerase III chi subunit, HolC 3 137 1.6E-25 T 13-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 Atc_0723 3b89c5ffe4eee3f59d484f7694866437 143 SUPERFAMILY SSF102400 3 141 2.35E-24 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Atc_2476 a57d536bff0e9a5f7e32666f60a09268 365 Gene3D G3DSA:2.40.160.60 29 365 1.9E-35 T 13-10-2018 Atc_2476 a57d536bff0e9a5f7e32666f60a09268 365 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 168 8.8E-13 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Atc_2476 a57d536bff0e9a5f7e32666f60a09268 365 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 209 365 1.9E-11 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Atc_2476 a57d536bff0e9a5f7e32666f60a09268 365 SUPERFAMILY SSF56935 29 365 5.86E-34 T 13-10-2018 Atc_2562 cd13259e519e54864f9ffd2afd517c2e 572 Gene3D G3DSA:1.10.3720.10 357 563 6.9E-14 T 13-10-2018 IPR035906 MetI-like superfamily Atc_2562 cd13259e519e54864f9ffd2afd517c2e 572 Gene3D G3DSA:1.10.3720.10 55 260 1.6E-23 T 13-10-2018 IPR035906 MetI-like superfamily Atc_2562 cd13259e519e54864f9ffd2afd517c2e 572 SUPERFAMILY SSF161098 59 255 4.71E-19 T 13-10-2018 IPR035906 MetI-like superfamily Atc_2562 cd13259e519e54864f9ffd2afd517c2e 572 SUPERFAMILY SSF161098 372 557 3.4E-14 T 13-10-2018 IPR035906 MetI-like superfamily Atc_2562 cd13259e519e54864f9ffd2afd517c2e 572 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 386 570 2.3E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atc_2562 cd13259e519e54864f9ffd2afd517c2e 572 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 252 3.2E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atc_2856 9b8ff0f72bcf957b231ff9cb27e2ed63 161 Gene3D G3DSA:2.40.10.330 71 121 4.6E-56 T 13-10-2018 Atc_2856 9b8ff0f72bcf957b231ff9cb27e2ed63 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 110 1.3E-13 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Atc_2856 9b8ff0f72bcf957b231ff9cb27e2ed63 161 SUPERFAMILY SSF54534 3 140 5.5E-35 T 13-10-2018 Atc_2856 9b8ff0f72bcf957b231ff9cb27e2ed63 161 Gene3D G3DSA:3.10.50.40 3 154 4.6E-56 T 13-10-2018 Atc_0432 906afa775dbdf04279fd2849288b5e76 132 SUPERFAMILY SSF88723 6 119 1.82E-21 T 13-10-2018 IPR029060 PIN-like domain superfamily Atc_0432 906afa775dbdf04279fd2849288b5e76 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 6 126 11.1 T 13-10-2018 IPR022907 VapC family GO:0004540 Atc_0432 906afa775dbdf04279fd2849288b5e76 132 Gene3D G3DSA:3.40.50.1010 6 123 1.5E-20 T 13-10-2018 Atc_0432 906afa775dbdf04279fd2849288b5e76 132 Pfam PF01850 PIN domain 6 118 2.1E-20 T 13-10-2018 IPR002716 PIN domain Atc_0930 933d82f4f4f38bc9ba4806ec92134821 83 Gene3D G3DSA:2.40.50.220 1 83 9.4E-34 T 13-10-2018 IPR036677 EutN/Ccml superfamily Atc_0930 933d82f4f4f38bc9ba4806ec92134821 83 SUPERFAMILY SSF159133 1 81 7.85E-26 T 13-10-2018 IPR036677 EutN/Ccml superfamily Atc_0930 933d82f4f4f38bc9ba4806ec92134821 83 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 80 2.0E-30 T 13-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Atc_0930 933d82f4f4f38bc9ba4806ec92134821 83 TIGRFAM TIGR02703 carboxysome_A: carboxysome peptide A 1 81 2.0E-49 T 13-10-2018 IPR014076 Carboxysome peptide A Atc_0930 933d82f4f4f38bc9ba4806ec92134821 83 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 78 1.5E-22 T 13-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Atc_2565 d987eb0da03e050fe42d2570ddd9886b 118 Pfam PF13441 YMGG-like Gly-zipper 42 85 8.6E-10 T 13-10-2018 IPR027367 YMGG-like Gly-zipper Atc_0061 5efe120bc7095fa7a8bc3fabe9f0affe 475 Pfam PF02321 Outer membrane efflux protein 72 259 2.9E-28 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_0061 5efe120bc7095fa7a8bc3fabe9f0affe 475 Pfam PF02321 Outer membrane efflux protein 286 467 5.6E-34 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_0061 5efe120bc7095fa7a8bc3fabe9f0affe 475 Gene3D G3DSA:1.20.1600.10 48 472 4.5E-90 T 13-10-2018 Atc_0061 5efe120bc7095fa7a8bc3fabe9f0affe 475 PIRSF PIRSF001892 2 475 1.3E-95 T 13-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 Atc_0061 5efe120bc7095fa7a8bc3fabe9f0affe 475 SUPERFAMILY SSF56954 15 470 9.02E-85 T 13-10-2018 Atc_1821 4f8c815bc1ab822e61c2836bcce1cd48 194 PIRSF PIRSF000847 1 190 1.7E-46 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Atc_1821 4f8c815bc1ab822e61c2836bcce1cd48 194 Gene3D G3DSA:1.20.120.1760 3 180 9.3E-13 T 13-10-2018 Atc_1821 4f8c815bc1ab822e61c2836bcce1cd48 194 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Atc_1821 4f8c815bc1ab822e61c2836bcce1cd48 194 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 70 6.3E-16 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Atc_1821 4f8c815bc1ab822e61c2836bcce1cd48 194 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 183 9.6E-50 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Atc_0727 a4ec380a4d58673245ce95b8779ca5bd 357 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 350 3.1E-60 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Atc_0727 a4ec380a4d58673245ce95b8779ca5bd 357 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.8E-90 T 13-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 Atc_1947 99eb4b7dc545fbd7b6831bd7a35a8ffe 521 SUPERFAMILY SSF103473 27 502 3.14E-38 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_1947 99eb4b7dc545fbd7b6831bd7a35a8ffe 521 Gene3D G3DSA:1.20.1720.10 26 232 1.5E-30 T 13-10-2018 Atc_1947 99eb4b7dc545fbd7b6831bd7a35a8ffe 521 Pfam PF07690 Major Facilitator Superfamily 32 390 5.5E-28 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_1947 99eb4b7dc545fbd7b6831bd7a35a8ffe 521 Gene3D G3DSA:1.20.1250.20 275 512 4.3E-6 T 13-10-2018 Atc_2054 38e6353ac6df4be742e649817f18a06a 365 Pfam PF00437 Type II/IV secretion system protein 92 282 8.9E-35 T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_2054 38e6353ac6df4be742e649817f18a06a 365 Gene3D G3DSA:3.40.50.300 113 365 5.4E-73 T 13-10-2018 Atc_2054 38e6353ac6df4be742e649817f18a06a 365 SUPERFAMILY SSF52540 70 351 4.65E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2821 4efb78db479977d14a96ad3d7e422c83 144 Pfam PF14346 Domain of unknown function (DUF4398) 19 120 4.3E-13 T 13-10-2018 IPR025511 Domain of unknown function DUF4398 Atc_1606 cc4ee2b1fe31e89e5e77873bb5addc64 954 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 19 66 3.4E-14 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1606 cc4ee2b1fe31e89e5e77873bb5addc64 954 SUPERFAMILY SSF50692 771 926 6.56E-30 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atc_1606 cc4ee2b1fe31e89e5e77873bb5addc64 954 SUPERFAMILY SSF53706 15 749 9.42E-135 T 13-10-2018 Atc_1606 cc4ee2b1fe31e89e5e77873bb5addc64 954 Pfam PF01568 Molydopterin dinucleotide binding domain 781 856 1.6E-9 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Atc_1606 cc4ee2b1fe31e89e5e77873bb5addc64 954 Gene3D G3DSA:2.40.40.20 753 918 3.2E-24 T 13-10-2018 Atc_1606 cc4ee2b1fe31e89e5e77873bb5addc64 954 Pfam PF00384 Molybdopterin oxidoreductase 72 592 3.5E-33 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1606 cc4ee2b1fe31e89e5e77873bb5addc64 954 Gene3D G3DSA:3.40.50.740 9 647 4.9E-94 T 13-10-2018 Atc_1606 cc4ee2b1fe31e89e5e77873bb5addc64 954 SMART SM00926 14 68 1.2E-16 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_m039 5263461d3e9ca03f437ccdcd703c8ea5 94 Gene3D G3DSA:3.30.2310.20 1 90 7.5E-29 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atc_m039 5263461d3e9ca03f437ccdcd703c8ea5 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 86 9.9E-13 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atc_m039 5263461d3e9ca03f437ccdcd703c8ea5 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 89 1.7E-17 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atc_2584 648f527052efc6d110bd7870b98c2c50 154 Gene3D G3DSA:2.40.128.520 65 148 3.1E-10 T 13-10-2018 Atc_2584 648f527052efc6d110bd7870b98c2c50 154 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 31 133 2.5E-12 T 13-10-2018 IPR019223 Domain of unknown function DUF2147 Atc_2372 bac9d3308ef06cc65596c1706259755b 276 Gene3D G3DSA:2.40.10.350 178 255 8.0E-32 T 13-10-2018 Atc_2372 bac9d3308ef06cc65596c1706259755b 276 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 63 271 6.3E-42 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Atc_2372 bac9d3308ef06cc65596c1706259755b 276 Gene3D G3DSA:2.40.10.340 119 265 8.0E-32 T 13-10-2018 Atc_2372 bac9d3308ef06cc65596c1706259755b 276 PIRSF PIRSF038471 4 275 2.7E-52 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Atc_2372 bac9d3308ef06cc65596c1706259755b 276 Pfam PF04085 rod shape-determining protein MreC 121 267 4.3E-33 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Atc_2354 d0dc23bb52db6a37311955d86d30f066 76 Pfam PF01206 Sulfurtransferase TusA 6 75 4.1E-22 T 13-10-2018 IPR001455 TusA-like domain Atc_2354 d0dc23bb52db6a37311955d86d30f066 76 SUPERFAMILY SSF64307 2 75 2.49E-23 T 13-10-2018 IPR036868 TusA-like domain superfamily Atc_2354 d0dc23bb52db6a37311955d86d30f066 76 Gene3D G3DSA:3.30.110.40 1 76 6.7E-29 T 13-10-2018 IPR036868 TusA-like domain superfamily Atc_2354 d0dc23bb52db6a37311955d86d30f066 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 8 32 - T 13-10-2018 IPR001455 TusA-like domain Atc_2599 c879ae3ff102fe54b90be026f0165d57 235 Pfam PF00753 Metallo-beta-lactamase superfamily 15 171 5.2E-14 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_2599 c879ae3ff102fe54b90be026f0165d57 235 SMART SM00849 12 171 3.1E-31 T 13-10-2018 IPR001279 Metallo-beta-lactamase Atc_2599 c879ae3ff102fe54b90be026f0165d57 235 SUPERFAMILY SSF56281 1 224 4.06E-53 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_2599 c879ae3ff102fe54b90be026f0165d57 235 Gene3D G3DSA:3.60.15.10 1 233 1.2E-80 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_0083 fdc325b56f8f5f74221ebe7d85537b90 142 Pfam PF02566 OsmC-like protein 35 132 2.0E-17 T 13-10-2018 IPR003718 OsmC/Ohr family Atc_0083 fdc325b56f8f5f74221ebe7d85537b90 142 SUPERFAMILY SSF82784 1 137 1.26E-38 T 13-10-2018 IPR036102 OsmC/Ohr superfamily Atc_0083 fdc325b56f8f5f74221ebe7d85537b90 142 Gene3D G3DSA:3.30.300.20 41 139 7.1E-30 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Atc_0083 fdc325b56f8f5f74221ebe7d85537b90 142 Gene3D G3DSA:2.20.25.10 1 34 7.0E-6 T 13-10-2018 Atc_2337 b09377bbfef5081554dce1188a1055f2 301 Gene3D G3DSA:3.30.930.10 1 209 1.8E-23 T 13-10-2018 Atc_2337 b09377bbfef5081554dce1188a1055f2 301 SUPERFAMILY SSF55681 3 185 2.65E-31 T 13-10-2018 Atc_1450 a9f9647d4a3a67ce6e533566bce8f77c 153 SUPERFAMILY SSF75708 26 152 1.7E-14 T 13-10-2018 Atc_0426 0ce2a974e43cd39fe377120c79306133 200 SUPERFAMILY SSF56349 4 60 6.47E-7 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_0426 0ce2a974e43cd39fe377120c79306133 200 Pfam PF00589 Phage integrase family 68 192 6.9E-19 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_0426 0ce2a974e43cd39fe377120c79306133 200 SUPERFAMILY SSF56349 68 197 5.89E-33 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_0426 0ce2a974e43cd39fe377120c79306133 200 Gene3D G3DSA:1.10.443.10 19 199 1.1E-33 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_2250 4e40e17b7388e9640ad60efdb283a9a0 257 SUPERFAMILY SSF52540 7 233 6.66E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2250 4e40e17b7388e9640ad60efdb283a9a0 257 SMART SM00382 31 221 2.3E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2250 4e40e17b7388e9640ad60efdb283a9a0 257 Pfam PF00005 ABC transporter 24 172 9.4E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_2250 4e40e17b7388e9640ad60efdb283a9a0 257 Gene3D G3DSA:3.40.50.300 6 253 1.7E-65 T 13-10-2018 Atc_m205 a556a7bdaa2c08020401a906a1012306 520 Pfam PF13007 Transposase C of IS166 homeodomain 32 92 4.2E-11 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain Atc_m205 a556a7bdaa2c08020401a906a1012306 520 Pfam PF13817 IS66 C-terminal element 462 498 1.8E-11 T 13-10-2018 IPR039552 Transposase IS66, C-terminal Atc_m205 a556a7bdaa2c08020401a906a1012306 520 Pfam PF03050 Transposase IS66 family 175 455 2.9E-86 T 13-10-2018 IPR004291 Transposase, IS66 Atc_2552 5342701ce4153f4fee1c8e140a3dedb4 103 Pfam PF10993 Protein of unknown function (DUF2818) 8 96 1.5E-32 T 13-10-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane Atc_2362 e24b3adffe8be492819d548a47451225 506 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 284 493 1.2E-15 T 13-10-2018 Atc_2362 e24b3adffe8be492819d548a47451225 506 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 26 254 2.8E-35 T 13-10-2018 Atc_2362 e24b3adffe8be492819d548a47451225 506 SUPERFAMILY SSF53850 33 266 2.94E-13 T 13-10-2018 Atc_2362 e24b3adffe8be492819d548a47451225 506 Gene3D G3DSA:3.40.190.10 365 464 1.9E-9 T 13-10-2018 Atc_2362 e24b3adffe8be492819d548a47451225 506 Gene3D G3DSA:3.40.190.10 105 207 2.1E-27 T 13-10-2018 Atc_2362 e24b3adffe8be492819d548a47451225 506 Gene3D G3DSA:3.40.190.10 28 233 2.1E-27 T 13-10-2018 Atc_2362 e24b3adffe8be492819d548a47451225 506 Gene3D G3DSA:3.40.190.10 285 489 1.9E-9 T 13-10-2018 Atc_1552 f2532444e44dbb19e68c0682ca7ece52 107 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1 99 4.9E-22 T 13-10-2018 IPR000160 GGDEF domain Atc_1552 f2532444e44dbb19e68c0682ca7ece52 107 SUPERFAMILY SSF55073 1 101 5.02E-26 T 13-10-2018 IPR029787 Nucleotide cyclase Atc_1552 f2532444e44dbb19e68c0682ca7ece52 107 Gene3D G3DSA:3.30.70.270 1 106 8.5E-29 T 13-10-2018 Atc_1552 f2532444e44dbb19e68c0682ca7ece52 107 SMART SM00267 1 103 3.5E-5 T 13-10-2018 IPR000160 GGDEF domain Atc_1552 f2532444e44dbb19e68c0682ca7ece52 107 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 102 1.1E-21 T 13-10-2018 IPR000160 GGDEF domain Atc_1228 7b3e42ca107aaefaaaf2ee887f76721c 475 SUPERFAMILY SSF53335 192 471 1.99E-11 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1228 7b3e42ca107aaefaaaf2ee887f76721c 475 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 33 47 5.1E-7 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atc_1228 7b3e42ca107aaefaaaf2ee887f76721c 475 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 91 111 5.1E-7 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atc_1228 7b3e42ca107aaefaaaf2ee887f76721c 475 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 450 470 5.1E-7 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atc_1228 7b3e42ca107aaefaaaf2ee887f76721c 475 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 426 444 5.1E-7 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atc_1228 7b3e42ca107aaefaaaf2ee887f76721c 475 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 37 43 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atc_1228 7b3e42ca107aaefaaaf2ee887f76721c 475 SUPERFAMILY SSF53335 13 183 5.82E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1228 7b3e42ca107aaefaaaf2ee887f76721c 475 Pfam PF01555 DNA methylase 37 466 1.8E-7 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Atc_m021 915ed65daf4b9c6e1bb70e75555efb46 50 Pfam PF01799 [2Fe-2S] binding domain 1 41 1.6E-12 T 13-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Atc_m021 915ed65daf4b9c6e1bb70e75555efb46 50 SUPERFAMILY SSF47741 1 48 3.79E-16 T 13-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Atc_m021 915ed65daf4b9c6e1bb70e75555efb46 50 Gene3D G3DSA:1.10.150.120 1 50 7.6E-15 T 13-10-2018 Atc_2747 8a10f04da2c154ac7bf86fd8a0fad019 284 Gene3D G3DSA:1.20.81.30 108 219 1.0E-10 T 13-10-2018 Atc_2747 8a10f04da2c154ac7bf86fd8a0fad019 284 Pfam PF00482 Type II secretion system (T2SS), protein F 118 241 5.1E-19 T 13-10-2018 IPR018076 Type II secretion system F domain Atc_2123 0d6b49e3ff4f7a0a37651828477bb21a 127 TIGRFAM TIGR03741 PRTRC_E: PRTRC system protein E 1 89 7.2E-16 T 13-10-2018 IPR022273 ParB-related, ThiF-related cassette, protein E Atc_0835 8343d1b4b9d6d690e546236095e16a8b 260 SUPERFAMILY SSF52172 24 145 2.42E-40 T 13-10-2018 IPR011006 CheY-like superfamily Atc_0835 8343d1b4b9d6d690e546236095e16a8b 260 SMART SM00448 24 137 3.0E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0835 8343d1b4b9d6d690e546236095e16a8b 260 SMART SM00862 171 246 1.7E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_0835 8343d1b4b9d6d690e546236095e16a8b 260 Pfam PF00072 Response regulator receiver domain 26 137 2.7E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atc_0835 8343d1b4b9d6d690e546236095e16a8b 260 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 25 246 8.0E-91 T 13-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 Atc_0835 8343d1b4b9d6d690e546236095e16a8b 260 Pfam PF00486 Transcriptional regulatory protein, C terminal 174 245 4.3E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atc_0835 8343d1b4b9d6d690e546236095e16a8b 260 Gene3D G3DSA:3.40.50.2300 18 146 9.8E-37 T 13-10-2018 Atc_0835 8343d1b4b9d6d690e546236095e16a8b 260 Gene3D G3DSA:1.10.10.10 148 248 1.0E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0835 8343d1b4b9d6d690e546236095e16a8b 260 SUPERFAMILY SSF46894 148 245 6.8E-29 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atc_0832 fd8bb367406d766ba51381212bfe9f97 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 13-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Atc_0832 fd8bb367406d766ba51381212bfe9f97 112 PRINTS PR00355 Adrenodoxin signature 83 91 1.4E-9 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Atc_0832 fd8bb367406d766ba51381212bfe9f97 112 PRINTS PR00355 Adrenodoxin signature 42 52 1.4E-9 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Atc_0832 fd8bb367406d766ba51381212bfe9f97 112 PRINTS PR00355 Adrenodoxin signature 60 74 1.4E-9 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Atc_0832 fd8bb367406d766ba51381212bfe9f97 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 3 110 9.8E-54 T 13-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 Atc_0832 fd8bb367406d766ba51381212bfe9f97 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 91 4.3E-15 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Atc_0832 fd8bb367406d766ba51381212bfe9f97 112 Gene3D G3DSA:3.10.20.30 1 112 5.5E-36 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Atc_0832 fd8bb367406d766ba51381212bfe9f97 112 SUPERFAMILY SSF54292 6 105 3.33E-32 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atc_2023 2433c606bcbe2ddc62bbb3904785e222 329 Pfam PF05063 MT-A70 124 282 2.0E-22 T 13-10-2018 IPR007757 MT-A70-like Atc_2023 2433c606bcbe2ddc62bbb3904785e222 329 Gene3D G3DSA:3.40.50.150 110 272 5.4E-7 T 13-10-2018 Atc_2023 2433c606bcbe2ddc62bbb3904785e222 329 SUPERFAMILY SSF53335 116 227 1.12E-11 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1534 a0ec7a026ae6bf5395f7b91786d10ed3 307 SUPERFAMILY SSF53659 6 299 4.93E-62 T 13-10-2018 Atc_1534 a0ec7a026ae6bf5395f7b91786d10ed3 307 PIRSF PIRSF000428 1 303 5.4E-77 T 13-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Atc_1534 a0ec7a026ae6bf5395f7b91786d10ed3 307 Pfam PF01515 Phosphate acetyl/butaryl transferase 82 296 1.7E-40 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Atc_1534 a0ec7a026ae6bf5395f7b91786d10ed3 307 Gene3D G3DSA:3.40.718.10 6 300 3.5E-91 T 13-10-2018 Atc_2397 4fa093df3c86b6f87b394e107426d43b 112 SUPERFAMILY SSF55248 22 111 2.22E-29 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Atc_2397 4fa093df3c86b6f87b394e107426d43b 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 20 111 22.039 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Atc_2397 4fa093df3c86b6f87b394e107426d43b 112 Gene3D G3DSA:3.30.1360.20 22 112 5.4E-29 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Atc_2397 4fa093df3c86b6f87b394e107426d43b 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 22 109 1.5E-26 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Atc_2516 060530e2ba544613c070a93eea334dcb 197 Pfam PF12915 Protein of unknown function (DUF3833) 15 182 1.9E-54 T 13-10-2018 IPR024409 Protein of unknown function DUF3833 Atc_0606 60c249b291a78c1045c05cfa72254e53 205 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 200 2.4E-62 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0606 60c249b291a78c1045c05cfa72254e53 205 Gene3D G3DSA:3.40.1370.10 4 205 8.3E-60 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Atc_0606 60c249b291a78c1045c05cfa72254e53 205 SUPERFAMILY SSF52166 2 204 6.02E-62 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Atc_0606 60c249b291a78c1045c05cfa72254e53 205 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 205 29.263 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0606 60c249b291a78c1045c05cfa72254e53 205 Pfam PF00573 Ribosomal protein L4/L1 family 16 202 4.6E-55 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Atc_2264 4436986c7143714f4f9edea555c616b7 148 Gene3D G3DSA:1.10.1510.10 1 90 3.1E-31 T 13-10-2018 Atc_2264 4436986c7143714f4f9edea555c616b7 148 SUPERFAMILY SSF89095 1 146 1.83E-41 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Atc_2264 4436986c7143714f4f9edea555c616b7 148 Pfam PF09424 Yqey-like protein 4 146 2.8E-54 T 13-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Atc_2264 4436986c7143714f4f9edea555c616b7 148 Gene3D G3DSA:1.10.10.410 91 147 1.8E-16 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Atc_m079 c2a7fe7940c1cd875188b44559ed33ec 133 Gene3D G3DSA:2.40.50.320 57 132 1.5E-18 T 13-10-2018 Atc_m079 c2a7fe7940c1cd875188b44559ed33ec 133 Pfam PF11604 Copper binding periplasmic protein CusF 63 129 2.4E-20 T 13-10-2018 IPR021647 Copper binding periplasmic protein CusF Atc_1349 12d521845c296ff06d2446f5d3727530 279 SUPERFAMILY SSF56300 8 265 7.39E-33 T 13-10-2018 Atc_1349 12d521845c296ff06d2446f5d3727530 279 Gene3D G3DSA:3.60.21.10 7 259 1.4E-16 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Atc_1349 12d521845c296ff06d2446f5d3727530 279 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 10 231 2.0E-10 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Atc_0838 7f8b37f02d88207cd7c8a54308649c73 239 Pfam PF01895 PhoU domain 23 109 5.4E-21 T 13-10-2018 IPR026022 PhoU domain Atc_0838 7f8b37f02d88207cd7c8a54308649c73 239 Pfam PF01895 PhoU domain 130 213 1.7E-15 T 13-10-2018 IPR026022 PhoU domain Atc_0838 7f8b37f02d88207cd7c8a54308649c73 239 PIRSF PIRSF003107 5 227 1.8E-63 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Atc_0838 7f8b37f02d88207cd7c8a54308649c73 239 SUPERFAMILY SSF109755 9 231 2.3E-66 T 13-10-2018 Atc_0838 7f8b37f02d88207cd7c8a54308649c73 239 Gene3D G3DSA:1.20.58.220 121 235 6.7E-32 T 13-10-2018 IPR038078 PhoU-like domain superfamily Atc_0838 7f8b37f02d88207cd7c8a54308649c73 239 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 9 222 5.0E-70 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Atc_0838 7f8b37f02d88207cd7c8a54308649c73 239 Gene3D G3DSA:1.20.58.220 1 120 4.0E-39 T 13-10-2018 IPR038078 PhoU-like domain superfamily Atc_0902 6d3918062fccf45b81fddfd2dfdd8efd 97 Gene3D G3DSA:3.40.1260.10 1 97 1.4E-24 T 13-10-2018 IPR027396 DsrEFH-like Atc_0902 6d3918062fccf45b81fddfd2dfdd8efd 97 SUPERFAMILY SSF75169 2 97 4.12E-17 T 13-10-2018 IPR027396 DsrEFH-like Atc_0902 6d3918062fccf45b81fddfd2dfdd8efd 97 Pfam PF02635 DsrE/DsrF-like family 7 97 7.3E-6 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_2351 53be2ff4183ac99634b59d0b9f3ba528 447 Pfam PF02754 Cysteine-rich domain 253 351 3.1E-7 T 13-10-2018 IPR004017 Cysteine-rich domain Atc_1411 b3ff7c2eee17d0dc1e22b2c05c519561 162 SUPERFAMILY SSF81901 79 156 2.22E-11 T 13-10-2018 Atc_1411 b3ff7c2eee17d0dc1e22b2c05c519561 162 Gene3D G3DSA:1.25.40.10 76 162 5.1E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_1411 b3ff7c2eee17d0dc1e22b2c05c519561 162 SMART SM00671 117 152 0.0083 T 13-10-2018 IPR006597 Sel1-like repeat Atc_1411 b3ff7c2eee17d0dc1e22b2c05c519561 162 SMART SM00671 85 116 71.0 T 13-10-2018 IPR006597 Sel1-like repeat Atc_2569 7f8d057089b2b956572b1e8aaa25d704 162 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 10 151 1.6E-67 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2569 7f8d057089b2b956572b1e8aaa25d704 162 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 150 41.217 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2569 7f8d057089b2b956572b1e8aaa25d704 162 Gene3D G3DSA:3.40.50.12280 4 161 8.7E-70 T 13-10-2018 Atc_2569 7f8d057089b2b956572b1e8aaa25d704 162 SUPERFAMILY SSF56770 10 152 7.46E-63 T 13-10-2018 Atc_2569 7f8d057089b2b956572b1e8aaa25d704 162 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 143 1.2E-21 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0251 2fa875b109d738ee379a508e89ecc3af 189 Pfam PF14235 Domain of unknown function (DUF4337) 28 186 4.9E-39 T 13-10-2018 IPR025570 Protein of unknown function DUF4337 Atc_2385 2b1a1f68853683a6b8491936db329601 188 Gene3D G3DSA:3.40.50.300 3 183 1.6E-19 T 13-10-2018 Atc_2385 2b1a1f68853683a6b8491936db329601 188 SUPERFAMILY SSF52540 6 177 2.47E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2385 2b1a1f68853683a6b8491936db329601 188 Pfam PF03029 Conserved hypothetical ATP binding protein 30 141 3.1E-9 T 13-10-2018 IPR004130 GPN-loop GTPase Atc_2385 2b1a1f68853683a6b8491936db329601 188 PRINTS PR00449 Transforming protein P21 ras signature 5 26 1.3E-6 T 13-10-2018 Atc_2385 2b1a1f68853683a6b8491936db329601 188 PRINTS PR00449 Transforming protein P21 ras signature 116 129 1.3E-6 T 13-10-2018 Atc_2385 2b1a1f68853683a6b8491936db329601 188 PRINTS PR00449 Transforming protein P21 ras signature 55 77 1.3E-6 T 13-10-2018 Atc_2385 2b1a1f68853683a6b8491936db329601 188 PRINTS PR00449 Transforming protein P21 ras signature 158 180 1.3E-6 T 13-10-2018 Atc_2485 1f611de7293b084a6267159ed1e3ed8c 240 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 231 9.4E-63 T 13-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Atc_2485 1f611de7293b084a6267159ed1e3ed8c 240 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 107 114 - T 13-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Atc_2485 1f611de7293b084a6267159ed1e3ed8c 240 SUPERFAMILY SSF53448 3 230 3.15E-50 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2485 1f611de7293b084a6267159ed1e3ed8c 240 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 230 2.0E-65 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Atc_2485 1f611de7293b084a6267159ed1e3ed8c 240 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 230 40.413 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Atc_2485 1f611de7293b084a6267159ed1e3ed8c 240 Gene3D G3DSA:3.90.550.10 1 234 9.6E-63 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_1599 ef5c21618b9db7d9ba5c26a6fa8ba1c6 77 SUPERFAMILY SSF50998 5 71 7.2E-10 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Atc_1599 ef5c21618b9db7d9ba5c26a6fa8ba1c6 77 Gene3D G3DSA:2.130.10.10 2 71 6.1E-7 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atc_m191 4632617fe86397728dc45102277b3dec 293 Gene3D G3DSA:2.40.170.20 2 293 4.3E-39 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atc_m191 4632617fe86397728dc45102277b3dec 293 Pfam PF00593 TonB dependent receptor 16 289 1.8E-23 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atc_m191 4632617fe86397728dc45102277b3dec 293 SUPERFAMILY SSF56935 12 293 1.47E-36 T 13-10-2018 Atc_1001 0e436e11890f72a398fea7a412497e1f 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 8 233 6.4E-106 T 13-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 Atc_1001 0e436e11890f72a398fea7a412497e1f 258 PIRSF PIRSF028756 1 258 1.8E-106 T 13-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Atc_1001 0e436e11890f72a398fea7a412497e1f 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 9 232 4.2E-96 T 13-10-2018 IPR022488 Polyphosphate kinase-2-related Atc_1001 0e436e11890f72a398fea7a412497e1f 258 Gene3D G3DSA:3.40.50.300 1 253 2.3E-87 T 13-10-2018 Atc_1001 0e436e11890f72a398fea7a412497e1f 258 SUPERFAMILY SSF52540 38 225 2.48E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1937 b37573bf6aa9d3e80d4c81d48943dd8b 232 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 6 227 3.0E-61 T 13-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 Atc_1937 b37573bf6aa9d3e80d4c81d48943dd8b 232 Gene3D G3DSA:1.20.950.20 4 219 5.1E-67 T 13-10-2018 Atc_1937 b37573bf6aa9d3e80d4c81d48943dd8b 232 SUPERFAMILY SSF103501 5 226 1.96E-57 T 13-10-2018 IPR036197 NarG-like superfamily Atc_1937 b37573bf6aa9d3e80d4c81d48943dd8b 232 Pfam PF02665 Nitrate reductase gamma subunit 6 227 8.1E-70 T 13-10-2018 IPR023234 NarG-like domain Atc_2819 64ca5f273609d24bb1f1204ad2e56cf5 204 TIGRFAM TIGR00172 maf: septum formation protein Maf 12 189 1.1E-44 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Atc_2819 64ca5f273609d24bb1f1204ad2e56cf5 204 SUPERFAMILY SSF52972 10 189 7.19E-56 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atc_2819 64ca5f273609d24bb1f1204ad2e56cf5 204 Gene3D G3DSA:3.90.950.10 10 196 3.5E-60 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atc_2819 64ca5f273609d24bb1f1204ad2e56cf5 204 Hamap MF_00528 Septum formation protein Maf [maf]. 11 196 29.066 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Atc_2819 64ca5f273609d24bb1f1204ad2e56cf5 204 PIRSF PIRSF006305 6 196 1.7E-43 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Atc_2819 64ca5f273609d24bb1f1204ad2e56cf5 204 Pfam PF02545 Maf-like protein 12 190 9.1E-50 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Atc_2797 6a5e739a18225276a0b808da0a73df8c 345 Gene3D G3DSA:1.10.10.10 258 336 1.1E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2797 6a5e739a18225276a0b808da0a73df8c 345 SUPERFAMILY SSF52540 21 252 8.4E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2797 6a5e739a18225276a0b808da0a73df8c 345 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 3.1E-30 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Atc_2797 6a5e739a18225276a0b808da0a73df8c 345 SUPERFAMILY SSF46785 258 331 5.14E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_2797 6a5e739a18225276a0b808da0a73df8c 345 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 327 5.1E-139 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Atc_2797 6a5e739a18225276a0b808da0a73df8c 345 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 328 4.0E-25 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Atc_2797 6a5e739a18225276a0b808da0a73df8c 345 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 345 166.876 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Atc_2797 6a5e739a18225276a0b808da0a73df8c 345 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 236 1.6E-113 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Atc_2797 6a5e739a18225276a0b808da0a73df8c 345 Gene3D G3DSA:3.40.50.300 19 182 3.2E-35 T 13-10-2018 Atc_2797 6a5e739a18225276a0b808da0a73df8c 345 SMART SM00382 52 183 1.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2797 6a5e739a18225276a0b808da0a73df8c 345 Gene3D G3DSA:1.10.8.60 183 257 3.9E-32 T 13-10-2018 Atc_1464 3b11f0cba5dbfe0d335c23f86f5eeb51 239 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 3 23 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Atc_1464 3b11f0cba5dbfe0d335c23f86f5eeb51 239 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 163 235 4.5E-17 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Atc_1464 3b11f0cba5dbfe0d335c23f86f5eeb51 239 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 113 5.9E-37 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Atc_1464 3b11f0cba5dbfe0d335c23f86f5eeb51 239 Pfam PF00460 Flagella basal body rod protein 1 27 1.4E-5 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Atc_1464 3b11f0cba5dbfe0d335c23f86f5eeb51 239 SUPERFAMILY SSF117143 70 197 7.72E-20 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Atc_1464 3b11f0cba5dbfe0d335c23f86f5eeb51 239 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 1 216 5.4E-55 T 13-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 Atc_0454 80df81c3e0edf924c6e17dd8dfc11fd3 351 Gene3D G3DSA:2.40.50.100 65 195 3.7E-49 T 13-10-2018 Atc_0454 80df81c3e0edf924c6e17dd8dfc11fd3 351 Gene3D G3DSA:1.10.287.470 99 162 3.7E-49 T 13-10-2018 Atc_0454 80df81c3e0edf924c6e17dd8dfc11fd3 351 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 343 4.5E-48 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atc_0454 80df81c3e0edf924c6e17dd8dfc11fd3 351 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 257 3.8E-19 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atc_0454 80df81c3e0edf924c6e17dd8dfc11fd3 351 SUPERFAMILY SSF111369 68 272 1.57E-16 T 13-10-2018 Atc_0454 80df81c3e0edf924c6e17dd8dfc11fd3 351 Gene3D G3DSA:2.40.420.20 40 332 3.7E-49 T 13-10-2018 Atc_0454 80df81c3e0edf924c6e17dd8dfc11fd3 351 Gene3D G3DSA:2.40.30.170 51 274 3.7E-49 T 13-10-2018 Atc_1279 5b6efdaa8f74330c357001b68b8bc563 929 Pfam PF08401 Domain of unknown function (DUF1738) 7 136 1.4E-28 T 13-10-2018 IPR013610 Domain of unknown function DUF1738 Atc_1932 1a4809471f18b311249fda9b82fa1872 53 Pfam PF11953 Domain of unknown function (DUF3470) 7 45 9.1E-16 T 13-10-2018 IPR022569 Ferredoxin, C-terminal Atc_2242 d044f56171083758356a7b8147d10678 215 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_2242 d044f56171083758356a7b8147d10678 215 SMART SM00382 23 215 4.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2242 d044f56171083758356a7b8147d10678 215 Pfam PF00005 ABC transporter 18 162 8.2E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_2242 d044f56171083758356a7b8147d10678 215 SUPERFAMILY SSF52540 15 207 2.34E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2242 d044f56171083758356a7b8147d10678 215 Gene3D G3DSA:3.40.50.300 1 214 6.8E-54 T 13-10-2018 Atc_1998 c0134cdc9b8b0fdd02e3eb45dd2188ba 417 Pfam PF14239 RRXRR protein 1 101 2.4E-37 T 13-10-2018 IPR025938 RRXRR domain Atc_1998 c0134cdc9b8b0fdd02e3eb45dd2188ba 417 Gene3D G3DSA:3.30.40.60 78 207 1.0E-17 T 13-10-2018 Atc_1998 c0134cdc9b8b0fdd02e3eb45dd2188ba 417 SMART SM00507 107 158 7.8E-13 T 13-10-2018 IPR003615 HNH nuclease Atc_1998 c0134cdc9b8b0fdd02e3eb45dd2188ba 417 Pfam PF14279 HNH endonuclease 120 168 8.3E-13 T 13-10-2018 IPR029471 HNH endonuclease 5 Atc_2096 383c00514335b8c003044d11bd79e17d 296 SUPERFAMILY SSF56024 3 155 7.4E-23 T 13-10-2018 Atc_2096 383c00514335b8c003044d11bd79e17d 296 SUPERFAMILY SSF56024 194 295 1.95E-15 T 13-10-2018 Atc_2096 383c00514335b8c003044d11bd79e17d 296 Gene3D G3DSA:3.30.870.10 1 151 2.6E-25 T 13-10-2018 Atc_2096 383c00514335b8c003044d11bd79e17d 296 Gene3D G3DSA:3.30.870.10 182 295 1.9E-17 T 13-10-2018 Atc_2096 383c00514335b8c003044d11bd79e17d 296 Pfam PF13091 PLD-like domain 195 291 2.5E-14 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atc_2096 383c00514335b8c003044d11bd79e17d 296 Pfam PF13091 PLD-like domain 13 147 1.5E-20 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atc_2380 8c8c7db80801eae2948d9e12d6f6de80 254 Pfam PF02698 DUF218 domain 70 234 6.1E-28 T 13-10-2018 IPR003848 Domain of unknown function DUF218 Atc_2380 8c8c7db80801eae2948d9e12d6f6de80 254 Gene3D G3DSA:3.40.50.620 118 199 3.3E-7 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_0066 161c3ba4ad58fd447d02a8032457ec73 508 Pfam PF02646 RmuC family 186 478 1.6E-91 T 13-10-2018 IPR003798 DNA recombination RmuC Atc_0981 64fc44e6d5c11b49361957b94dd392db 242 SUPERFAMILY SSF53474 14 237 1.14E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_0981 64fc44e6d5c11b49361957b94dd392db 242 Gene3D G3DSA:3.40.50.1820 12 235 3.0E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Atc_0981 64fc44e6d5c11b49361957b94dd392db 242 Pfam PF01738 Dienelactone hydrolase family 16 235 9.1E-51 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Atc_1746 1ec4c2259646195a7498ad75103e7487 141 SUPERFAMILY SSF52821 17 140 5.11E-37 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Atc_1746 1ec4c2259646195a7498ad75103e7487 141 Pfam PF00581 Rhodanese-like domain 42 133 8.8E-18 T 13-10-2018 IPR001763 Rhodanese-like domain Atc_1746 1ec4c2259646195a7498ad75103e7487 141 SMART SM00450 40 137 1.9E-26 T 13-10-2018 IPR001763 Rhodanese-like domain Atc_1746 1ec4c2259646195a7498ad75103e7487 141 Gene3D G3DSA:3.40.250.10 27 141 9.4E-33 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Atc_0761 a3cc2a61d7dc427f034e08880dd94003 134 Gene3D G3DSA:3.90.1010.10 1 131 8.5E-59 T 13-10-2018 Atc_0761 a3cc2a61d7dc427f034e08880dd94003 134 Pfam PF01592 NifU-like N terminal domain 2 125 1.2E-57 T 13-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Atc_0761 a3cc2a61d7dc427f034e08880dd94003 134 SUPERFAMILY SSF82649 1 128 3.14E-48 T 13-10-2018 Atc_0761 a3cc2a61d7dc427f034e08880dd94003 134 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 9.2E-68 T 13-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Atc_2267 6273f92871bb7f70df60371b3b6529aa 210 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 8 197 3.1E-44 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Atc_2267 6273f92871bb7f70df60371b3b6529aa 210 Hamap MF_01405 dITP/XTP pyrophosphatase. 5 199 43.287 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Atc_2267 6273f92871bb7f70df60371b3b6529aa 210 Gene3D G3DSA:3.90.950.10 3 201 1.3E-67 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atc_2267 6273f92871bb7f70df60371b3b6529aa 210 Pfam PF01725 Ham1 family 9 195 2.4E-48 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Atc_2267 6273f92871bb7f70df60371b3b6529aa 210 SUPERFAMILY SSF52972 5 197 4.71E-62 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atc_1569 04086d666aa772b73dcb7b0a427c4d83 318 Pfam PF01609 Transposase DDE domain 144 308 2.5E-26 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1569 04086d666aa772b73dcb7b0a427c4d83 318 Pfam PF05598 Transposase domain (DUF772) 52 127 3.7E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_2561 cff5413384118b1f2366f85075ef878e 435 Pfam PF09821 C-terminal AAA-associated domain 307 423 4.3E-40 T 13-10-2018 IPR018632 C-terminal AAA-associated domain Atc_2561 cff5413384118b1f2366f85075ef878e 435 SUPERFAMILY SSF52540 14 245 8.87E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2561 cff5413384118b1f2366f85075ef878e 435 Gene3D G3DSA:3.40.50.300 11 239 5.0E-55 T 13-10-2018 Atc_2561 cff5413384118b1f2366f85075ef878e 435 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atc_2561 cff5413384118b1f2366f85075ef878e 435 Pfam PF00005 ABC transporter 30 169 3.6E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_2561 cff5413384118b1f2366f85075ef878e 435 SMART SM00382 39 387 5.8E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_2139 297dff108e1c1c30f99eb7511c966c6a 389 Pfam PF08273 Zinc-binding domain of primase-helicase 38 75 9.1E-12 T 13-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 Atc_2139 297dff108e1c1c30f99eb7511c966c6a 389 SUPERFAMILY SSF57783 18 100 3.74E-8 T 13-10-2018 Atc_2139 297dff108e1c1c30f99eb7511c966c6a 389 Pfam PF13362 Toprim domain 253 357 1.8E-11 T 13-10-2018 IPR006171 TOPRIM domain Atc_2139 297dff108e1c1c30f99eb7511c966c6a 389 SMART SM00778 38 76 5.1E-12 T 13-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 Atc_1680 37391aff1f0bd6570471280e34e28fae 210 Pfam PF13668 Ferritin-like domain 54 197 1.3E-39 T 13-10-2018 Atc_1680 37391aff1f0bd6570471280e34e28fae 210 SUPERFAMILY SSF47240 51 204 7.0E-37 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_1680 37391aff1f0bd6570471280e34e28fae 210 Gene3D G3DSA:1.20.1260.10 54 199 3.4E-10 T 13-10-2018 IPR012347 Ferritin-like Atc_1761 551f0224a7538b7d78adb5533f2fbd86 217 Pfam PF02656 Domain of unknown function (DUF202) 104 180 3.0E-15 T 13-10-2018 IPR003807 Domain of unknown function DUF202 Atc_m235 bce04ebe78767fecae7e8088a00265ae 158 Pfam PF09722 Protein of unknown function (DUF2384) 110 155 1.0E-11 T 13-10-2018 IPR024467 Domain of unknown function DUF2384 Atc_0661 cff578becd44019fce4024ce952885db 383 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 43 382 7.1E-25 T 13-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 Atc_0490 7e819c0b698a32c2c5d4cea2a203ac87 241 Pfam PF17036 Cellulose biosynthesis protein BcsS 133 234 6.6E-10 T 13-10-2018 IPR031485 Cellulose biosynthesis protein BcsS Atc_1825 0d4431e591ff31f761cfaa368dd3ecb5 110 Pfam PF03733 Inner membrane component domain 1 38 2.5E-10 T 13-10-2018 IPR005185 Inner membrane component domain Atc_1825 0d4431e591ff31f761cfaa368dd3ecb5 110 Pfam PF03733 Inner membrane component domain 55 103 3.8E-17 T 13-10-2018 IPR005185 Inner membrane component domain Atc_1305 53df36f8326d533b4a118c51f5932c67 405 Pfam PF00909 Ammonium Transporter Family 15 397 4.6E-89 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Atc_1305 53df36f8326d533b4a118c51f5932c67 405 ProSitePatterns PS01219 Ammonium transporters signature. 160 185 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Atc_1305 53df36f8326d533b4a118c51f5932c67 405 SUPERFAMILY SSF111352 10 378 4.71E-94 T 13-10-2018 Atc_1305 53df36f8326d533b4a118c51f5932c67 405 Gene3D G3DSA:1.10.3430.10 1 405 3.2E-100 T 13-10-2018 IPR029020 Ammonium/urea transporter Atc_2094 681c96a349ace3006405c23aa62b717b 181 Gene3D G3DSA:1.10.530.10 53 181 3.4E-28 T 13-10-2018 Atc_2094 681c96a349ace3006405c23aa62b717b 181 SUPERFAMILY SSF53955 41 176 4.76E-27 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_2094 681c96a349ace3006405c23aa62b717b 181 Pfam PF01464 Transglycosylase SLT domain 61 159 5.6E-17 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_2868 6941ac32a4af894e23daf42b3baca618 230 Pfam PF13511 Domain of unknown function (DUF4124) 12 61 5.9E-8 T 13-10-2018 IPR025392 Domain of unknown function DUF4124 Atc_2868 6941ac32a4af894e23daf42b3baca618 230 SUPERFAMILY SSF53955 68 197 3.75E-46 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_2868 6941ac32a4af894e23daf42b3baca618 230 Pfam PF01464 Transglycosylase SLT domain 77 171 6.0E-29 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_2868 6941ac32a4af894e23daf42b3baca618 230 Gene3D G3DSA:1.10.530.10 36 200 4.5E-46 T 13-10-2018 Atc_2827 3f769731767b74a5870b97f7c43c3b27 307 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 21 296 2.4E-61 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Atc_2827 3f769731767b74a5870b97f7c43c3b27 307 PIRSF PIRSF026649 3 305 1.4E-85 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Atc_2386 a5e52a68df5a87087cf5fea8be15484a 212 SUPERFAMILY SSF103196 90 153 4.97E-8 T 13-10-2018 Atc_2433 e8362aafdabbb851b0d9505ab7b80e83 275 Pfam PF00849 RNA pseudouridylate synthase 48 197 4.1E-31 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2433 e8362aafdabbb851b0d9505ab7b80e83 275 Gene3D G3DSA:3.30.2350.10 39 271 1.7E-71 T 13-10-2018 Atc_2433 e8362aafdabbb851b0d9505ab7b80e83 275 SUPERFAMILY SSF55120 31 268 7.04E-77 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2433 e8362aafdabbb851b0d9505ab7b80e83 275 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 268 1.4E-81 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_2433 e8362aafdabbb851b0d9505ab7b80e83 275 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 90 104 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atc_0512 532846d2578a144bc4dc8d87b82c3bcc 248 Gene3D G3DSA:3.90.70.10 57 213 1.4E-31 T 13-10-2018 Atc_0512 532846d2578a144bc4dc8d87b82c3bcc 248 Pfam PF03412 Peptidase C39 family 68 201 1.9E-19 T 13-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 Atc_1651 e0732583ebdc6f3d9aee1a487912d41c 291 Pfam PF02634 FdhD/NarQ family 33 267 7.2E-65 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Atc_1651 e0732583ebdc6f3d9aee1a487912d41c 291 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 13 268 28.812 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Atc_1651 e0732583ebdc6f3d9aee1a487912d41c 291 SUPERFAMILY SSF53927 20 267 2.29E-66 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Atc_1651 e0732583ebdc6f3d9aee1a487912d41c 291 Gene3D G3DSA:3.40.140.10 128 275 2.2E-45 T 13-10-2018 Atc_1651 e0732583ebdc6f3d9aee1a487912d41c 291 PIRSF PIRSF015626 7 271 3.3E-65 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Atc_1651 e0732583ebdc6f3d9aee1a487912d41c 291 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 28 267 2.9E-52 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Atc_1651 e0732583ebdc6f3d9aee1a487912d41c 291 Gene3D G3DSA:3.10.20.10 34 115 2.6E-9 T 13-10-2018 Atc_1114 b10d8a30eaca1bd7db23d853dc2aa531 799 Pfam PF04851 Type III restriction enzyme, res subunit 432 574 1.1E-20 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Atc_1114 b10d8a30eaca1bd7db23d853dc2aa531 799 SUPERFAMILY SSF52540 434 792 3.55E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1114 b10d8a30eaca1bd7db23d853dc2aa531 799 Pfam PF00271 Helicase conserved C-terminal domain 646 747 4.4E-5 T 13-10-2018 IPR001650 Helicase, C-terminal Atc_1114 b10d8a30eaca1bd7db23d853dc2aa531 799 SUPERFAMILY SSF52540 337 591 3.64E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1114 b10d8a30eaca1bd7db23d853dc2aa531 799 Gene3D G3DSA:3.40.50.300 613 799 5.6E-31 T 13-10-2018 Atc_1114 b10d8a30eaca1bd7db23d853dc2aa531 799 Gene3D G3DSA:3.40.50.300 423 599 1.2E-37 T 13-10-2018 Atc_1114 b10d8a30eaca1bd7db23d853dc2aa531 799 SMART SM00487 429 607 1.7E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_2417 c5427d73319f8645edb7407a982526a1 268 Pfam PF09339 IclR helix-turn-helix domain 13 62 1.7E-9 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atc_2417 c5427d73319f8645edb7407a982526a1 268 SMART SM00346 10 99 2.9E-10 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atc_2417 c5427d73319f8645edb7407a982526a1 268 SUPERFAMILY SSF46785 10 80 1.41E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_2417 c5427d73319f8645edb7407a982526a1 268 Gene3D G3DSA:3.30.450.40 78 255 1.0E-46 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_2417 c5427d73319f8645edb7407a982526a1 268 Pfam PF01614 Bacterial transcriptional regulator 127 245 1.1E-25 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal Atc_2417 c5427d73319f8645edb7407a982526a1 268 SUPERFAMILY SSF55781 83 248 1.57E-38 T 13-10-2018 Atc_2417 c5427d73319f8645edb7407a982526a1 268 Gene3D G3DSA:1.10.10.10 2 69 4.0E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1023 059d7001dc2580c3537af364a1c7d8ea 117 Gene3D G3DSA:2.40.10.220 5 117 4.0E-25 T 13-10-2018 Atc_1023 059d7001dc2580c3537af364a1c7d8ea 117 Pfam PF07238 PilZ domain 13 104 1.8E-9 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Atc_2735 131d268229e9e1fe9fa23e2b43747170 363 Pfam PF05598 Transposase domain (DUF772) 65 138 9.8E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_2735 131d268229e9e1fe9fa23e2b43747170 363 Pfam PF01609 Transposase DDE domain 182 354 9.3E-15 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0417 4080670ee49a45bb2fcab2aede05fa7a 295 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 68 289 8.4E-39 T 13-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atc_0417 4080670ee49a45bb2fcab2aede05fa7a 295 SUPERFAMILY SSF55681 63 241 8.28E-39 T 13-10-2018 Atc_0417 4080670ee49a45bb2fcab2aede05fa7a 295 Gene3D G3DSA:3.30.930.10 56 245 8.1E-45 T 13-10-2018 Atc_0417 4080670ee49a45bb2fcab2aede05fa7a 295 Gene3D G3DSA:2.30.30.100 247 294 4.7E-6 T 13-10-2018 Atc_0417 4080670ee49a45bb2fcab2aede05fa7a 295 SUPERFAMILY SSF50037 247 292 2.01E-5 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal Atc_0417 4080670ee49a45bb2fcab2aede05fa7a 295 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 187 6.4E-9 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Atc_0645 d996fe8bbd7de142503853d0e963766f 223 SUPERFAMILY SSF100950 2 146 1.2E-44 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Atc_0645 d996fe8bbd7de142503853d0e963766f 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 32.77 T 13-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Atc_0645 d996fe8bbd7de142503853d0e963766f 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 50 213 2.3E-57 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Atc_0645 d996fe8bbd7de142503853d0e963766f 223 Gene3D G3DSA:3.40.50.1360 7 207 2.0E-75 T 13-10-2018 Atc_0645 d996fe8bbd7de142503853d0e963766f 223 Gene3D G3DSA:3.30.70.260 125 196 2.0E-75 T 13-10-2018 Atc_0645 d996fe8bbd7de142503853d0e963766f 223 SUPERFAMILY SSF75445 127 198 2.35E-22 T 13-10-2018 Atc_0645 d996fe8bbd7de142503853d0e963766f 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 213 1.9E-66 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Atc_0936 19fbca60577e84540b177a2ebd1060ea 207 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 181 1.1E-11 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_0936 19fbca60577e84540b177a2ebd1060ea 207 SUPERFAMILY SSF52540 8 206 6.67E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0936 19fbca60577e84540b177a2ebd1060ea 207 PIRSF PIRSF009320 6 207 7.7E-33 T 13-10-2018 Atc_0936 19fbca60577e84540b177a2ebd1060ea 207 Gene3D G3DSA:3.40.50.300 9 207 9.5E-43 T 13-10-2018 Atc_2622 ed5c36b2e29a6c819933f9ad475580b7 235 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 10 79 1.2E-17 T 13-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Atc_2622 ed5c36b2e29a6c819933f9ad475580b7 235 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 1 227 36.424 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Atc_2622 ed5c36b2e29a6c819933f9ad475580b7 235 PIRSF PIRSF037208 1 234 3.1E-80 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Atc_2622 ed5c36b2e29a6c819933f9ad475580b7 235 SUPERFAMILY SSF55729 72 230 1.61E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atc_2622 ed5c36b2e29a6c819933f9ad475580b7 235 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 101 220 6.4E-33 T 13-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Atc_1127 05de379756881a70ab5e225650e5f325 414 Pfam PF13372 Alginate export 91 291 3.4E-14 T 13-10-2018 IPR025388 Alginate export domain Atc_0446 9d094bc97daf932cc7d698b1c525e4ef 362 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 13 240 1.6E-37 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atc_0446 9d094bc97daf932cc7d698b1c525e4ef 362 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 14 349 1.1E-76 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atc_2318 aad0de13566c2937e44b4b6917320163 333 Pfam PF01578 Cytochrome C assembly protein 120 328 2.5E-45 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Atc_2318 aad0de13566c2937e44b4b6917320163 333 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 90 331 9.1E-71 T 13-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 Atc_2089 2110fd1ada26a175109ae43c66006fb5 460 SUPERFAMILY SSF56317 253 452 8.37E-5 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_1526 b06f9351541ec018be61c27aabe7a4b2 133 Pfam PF03466 LysR substrate binding domain 1 125 1.9E-21 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_1526 b06f9351541ec018be61c27aabe7a4b2 133 Gene3D G3DSA:3.40.190.290 1 131 2.2E-23 T 13-10-2018 Atc_1526 b06f9351541ec018be61c27aabe7a4b2 133 SUPERFAMILY SSF53850 1 125 8.55E-20 T 13-10-2018 Atc_1537 49d6d55db60847056dabd81e4336e698 200 Gene3D G3DSA:2.40.160.180 11 189 1.6E-17 T 13-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily Atc_1537 49d6d55db60847056dabd81e4336e698 200 Pfam PF04966 Carbohydrate-selective porin, OprB family 85 188 2.3E-6 T 13-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 Atc_0096 236afcaf9dbd07356c51997c3c78a880 397 PIRSF PIRSF028408 2 390 9.9E-92 T 13-10-2018 IPR014544 Uncharacterised conserved protein UCP028408 Atc_0096 236afcaf9dbd07356c51997c3c78a880 397 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 209 386 7.0E-55 T 13-10-2018 IPR024534 Domain of unknown function DUF2220 Atc_0096 236afcaf9dbd07356c51997c3c78a880 397 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 6 186 4.5E-64 T 13-10-2018 IPR024537 Domain of unknown function DUF3322 Atc_1234 af887270693e7c6092cc20400cb4e0a6 234 SUPERFAMILY SSF53335 3 232 8.36E-17 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_1234 af887270693e7c6092cc20400cb4e0a6 234 Pfam PF01555 DNA methylase 183 220 3.2E-6 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Atc_1234 af887270693e7c6092cc20400cb4e0a6 234 Pfam PF01555 DNA methylase 3 110 2.8E-6 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Atc_1234 af887270693e7c6092cc20400cb4e0a6 234 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 180 198 6.6E-10 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atc_1234 af887270693e7c6092cc20400cb4e0a6 234 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 89 106 6.6E-10 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atc_1234 af887270693e7c6092cc20400cb4e0a6 234 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 203 223 6.6E-10 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atc_2870 cae34426b9822a63d0180ae267474011 211 Pfam PF13717 zinc-ribbon domain 1 36 7.7E-12 T 13-10-2018 IPR011723 Zinc finger/thioredoxin putative Atc_2870 cae34426b9822a63d0180ae267474011 211 Pfam PF11906 Protein of unknown function (DUF3426) 63 205 6.3E-26 T 13-10-2018 IPR021834 Protein of unknown function DUF3426 Atc_2870 cae34426b9822a63d0180ae267474011 211 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 36 9.9E-9 T 13-10-2018 IPR011723 Zinc finger/thioredoxin putative Atc_0475 52090e5c9ab0b2745f943375484dac54 301 PIRSF PIRSF003097 6 298 6.7E-69 T 13-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Atc_0475 52090e5c9ab0b2745f943375484dac54 301 Gene3D G3DSA:3.30.70.3040 51 145 7.6E-8 T 13-10-2018 Atc_1810 3de0d94315f5c2ef6862272312b7b2fe 136 Gene3D G3DSA:2.60.120.10 4 129 3.5E-6 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Atc_1810 3de0d94315f5c2ef6862272312b7b2fe 136 SUPERFAMILY SSF51182 28 129 7.83E-8 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Atc_0574 2f324fde00d658f5b579bdec5c551c0c 308 Pfam PF00589 Phage integrase family 127 293 5.2E-44 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_0574 2f324fde00d658f5b579bdec5c551c0c 308 SUPERFAMILY SSF56349 119 306 3.24E-53 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_0574 2f324fde00d658f5b579bdec5c551c0c 308 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 21 307 1.9E-105 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Atc_0574 2f324fde00d658f5b579bdec5c551c0c 308 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 15 308 55.009 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Atc_0574 2f324fde00d658f5b579bdec5c551c0c 308 Gene3D G3DSA:1.10.443.10 122 302 4.4E-61 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_0574 2f324fde00d658f5b579bdec5c551c0c 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 19 101 1.5E-17 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Atc_0574 2f324fde00d658f5b579bdec5c551c0c 308 Gene3D G3DSA:1.10.150.130 16 110 2.2E-18 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_0574 2f324fde00d658f5b579bdec5c551c0c 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 17 308 52.528 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Atc_0574 2f324fde00d658f5b579bdec5c551c0c 308 SUPERFAMILY SSF47823 19 110 3.14E-26 T 13-10-2018 Atc_1109 af169482ae8d843cb3440d95f41e102e 334 SUPERFAMILY SSF140931 80 249 1.83E-42 T 13-10-2018 IPR036597 Fido-like domain superfamily Atc_1109 af169482ae8d843cb3440d95f41e102e 334 Pfam PF02661 Fic/DOC family 102 197 1.3E-21 T 13-10-2018 IPR003812 Fido domain Atc_1109 af169482ae8d843cb3440d95f41e102e 334 Gene3D G3DSA:1.10.3290.10 18 259 4.1E-52 T 13-10-2018 IPR036597 Fido-like domain superfamily Atc_2180 4e25eb89af4ae0cfcb51c36b7845cd59 166 Gene3D G3DSA:3.40.50.300 5 154 1.3E-46 T 13-10-2018 Atc_2180 4e25eb89af4ae0cfcb51c36b7845cd59 166 SUPERFAMILY SSF52540 1 129 1.25E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2180 4e25eb89af4ae0cfcb51c36b7845cd59 166 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 4 155 1.3E-35 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Atc_2180 4e25eb89af4ae0cfcb51c36b7845cd59 166 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 4 132 5.0E-40 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Atc_2180 4e25eb89af4ae0cfcb51c36b7845cd59 166 Gene3D G3DSA:2.20.25.120 47 79 1.3E-46 T 13-10-2018 Atc_0941 0b5593219110bb311ba9a3a980fe07c7 1053 Hamap MF_01871 UPF0753 protein . 10 1022 24.142 T 13-10-2018 IPR018752 Uncharacterised protein family UPF0753 Atc_0941 0b5593219110bb311ba9a3a980fe07c7 1053 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 17 1007 1.5E-271 T 13-10-2018 IPR018752 Uncharacterised protein family UPF0753 Atc_1165 fbb5b47ba17c5602eaf53a718da00a8f 296 Pfam PF00437 Type II/IV secretion system protein 11 280 5.8E-71 T 13-10-2018 IPR001482 Type II/IV secretion system protein Atc_1165 fbb5b47ba17c5602eaf53a718da00a8f 296 Gene3D G3DSA:3.30.450.90 5 105 2.1E-9 T 13-10-2018 Atc_1165 fbb5b47ba17c5602eaf53a718da00a8f 296 Gene3D G3DSA:3.40.50.300 106 295 6.3E-54 T 13-10-2018 Atc_1165 fbb5b47ba17c5602eaf53a718da00a8f 296 SUPERFAMILY SSF52540 4 279 4.7E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1165 fbb5b47ba17c5602eaf53a718da00a8f 296 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 1 292 1.7E-116 T 13-10-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 Atc_1548 112683604a71847c2c898886262c9118 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 4 96 3.0E-36 T 13-10-2018 IPR014056 Addiction module killer protein, predicted Atc_1548 112683604a71847c2c898886262c9118 98 PIRSF PIRSF028744 1 98 1.6E-36 T 13-10-2018 IPR014056 Addiction module killer protein, predicted Atc_1490 3152a7e2e6a1650e38d373aa0b711c71 337 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 319 6.0E-19 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) Atc_1490 3152a7e2e6a1650e38d373aa0b711c71 337 SUPERFAMILY SSF103039 56 231 4.18E-19 T 13-10-2018 IPR028976 CheC-like superfamily Atc_1490 3152a7e2e6a1650e38d373aa0b711c71 337 Gene3D G3DSA:3.40.1550.10 45 233 1.2E-57 T 13-10-2018 IPR028976 CheC-like superfamily Atc_1490 3152a7e2e6a1650e38d373aa0b711c71 337 PIRSF PIRSF002888 2 330 3.9E-98 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Atc_1490 3152a7e2e6a1650e38d373aa0b711c71 337 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 319 2.0E-104 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Atc_1490 3152a7e2e6a1650e38d373aa0b711c71 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 3.1E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Atc_1490 3152a7e2e6a1650e38d373aa0b711c71 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 3.1E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Atc_1490 3152a7e2e6a1650e38d373aa0b711c71 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 3.1E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Atc_1490 3152a7e2e6a1650e38d373aa0b711c71 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 3.1E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Atc_1490 3152a7e2e6a1650e38d373aa0b711c71 337 SUPERFAMILY SSF101801 250 324 7.59E-15 T 13-10-2018 IPR036429 SpoA-like superfamily Atc_1490 3152a7e2e6a1650e38d373aa0b711c71 337 Pfam PF02154 Flagellar motor switch protein FliM 39 231 1.1E-72 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Atc_2527 b7562a549778a8c08bc3fb7657779ff3 261 Gene3D G3DSA:3.40.50.720 1 250 1.8E-57 T 13-10-2018 Atc_2527 b7562a549778a8c08bc3fb7657779ff3 261 SUPERFAMILY SSF51735 6 256 7.02E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_2527 b7562a549778a8c08bc3fb7657779ff3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.3E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2527 b7562a549778a8c08bc3fb7657779ff3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 3.3E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2527 b7562a549778a8c08bc3fb7657779ff3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.3E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2527 b7562a549778a8c08bc3fb7657779ff3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.3E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2527 b7562a549778a8c08bc3fb7657779ff3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.3E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_2527 b7562a549778a8c08bc3fb7657779ff3 261 Pfam PF00106 short chain dehydrogenase 13 201 3.3E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atc_1477 4d042033d2090dbdef7e8686daa86949 644 Pfam PF07196 Flagellin hook IN motif 126 179 4.2E-6 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Atc_1477 4d042033d2090dbdef7e8686daa86949 644 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 217 622 1.0E-33 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Atc_1477 4d042033d2090dbdef7e8686daa86949 644 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 106 2.5E-18 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Atc_m208 2b36c2c44eed6db86bad65af6d5043da 335 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 21 212 2.6E-27 T 13-10-2018 IPR000477 Reverse transcriptase domain Atc_m208 2b36c2c44eed6db86bad65af6d5043da 335 Pfam PF08388 Group II intron, maturase-specific domain 234 303 6.1E-16 T 13-10-2018 IPR013597 Group II intron, maturase-specific Atc_m208 2b36c2c44eed6db86bad65af6d5043da 335 SUPERFAMILY SSF56672 17 295 1.83E-33 T 13-10-2018 Atc_1775 729e4d7e3588579196f56279192714d5 772 SMART SM00965 315 363 9.6E-8 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Atc_1775 729e4d7e3588579196f56279192714d5 772 Gene3D G3DSA:2.60.40.3470 155 275 5.2E-21 T 13-10-2018 Atc_1775 729e4d7e3588579196f56279192714d5 772 Pfam PF00263 Bacterial type II and III secretion system protein 599 755 2.5E-52 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Atc_1775 729e4d7e3588579196f56279192714d5 772 Pfam PF03958 Bacterial type II/III secretion system short domain 388 483 7.4E-17 T 13-10-2018 IPR005644 NolW-like Atc_1775 729e4d7e3588579196f56279192714d5 772 PRINTS PR00811 Bacterial general secretion pathway protein D signature 483 493 2.0E-10 T 13-10-2018 IPR001775 GspD/PilQ family Atc_1775 729e4d7e3588579196f56279192714d5 772 PRINTS PR00811 Bacterial general secretion pathway protein D signature 743 757 2.0E-10 T 13-10-2018 IPR001775 GspD/PilQ family Atc_1775 729e4d7e3588579196f56279192714d5 772 PRINTS PR00811 Bacterial general secretion pathway protein D signature 720 738 2.0E-10 T 13-10-2018 IPR001775 GspD/PilQ family Atc_1775 729e4d7e3588579196f56279192714d5 772 Gene3D G3DSA:3.55.50.30 276 385 8.0E-32 T 13-10-2018 Atc_1775 729e4d7e3588579196f56279192714d5 772 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 291 755 2.6E-155 T 13-10-2018 IPR013355 Type IV pilus secretin PilQ Atc_2851 be39999520a967f25338ff74f56ec45f 92 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 3 71 4.0E-8 T 13-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 Atc_1050 1cf7987815c178a539501eefc98609fe 178 Gene3D G3DSA:3.40.50.2020 39 159 4.7E-29 T 13-10-2018 Atc_1050 1cf7987815c178a539501eefc98609fe 178 SUPERFAMILY SSF53271 2 157 6.82E-31 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Atc_1050 1cf7987815c178a539501eefc98609fe 178 Pfam PF00156 Phosphoribosyl transferase domain 10 109 8.3E-11 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atc_0250 49e88a0886436cde2f5398e9614b8ce2 231 SUPERFAMILY SSF100950 7 220 4.13E-55 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Atc_0250 49e88a0886436cde2f5398e9614b8ce2 231 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 13 213 7.8E-57 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Atc_0250 49e88a0886436cde2f5398e9614b8ce2 231 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 10 204 1.5E-46 T 13-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 Atc_0250 49e88a0886436cde2f5398e9614b8ce2 231 Gene3D G3DSA:3.40.50.1360 2 227 3.3E-62 T 13-10-2018 Atc_2011 840557bc25df29b0217cb875ffaeb022 244 SUPERFAMILY SSF55729 56 175 4.69E-7 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atc_0527 b9b78db482804c37fbc3ee41f9ca7457 315 Gene3D G3DSA:3.30.420.40 2 141 3.6E-28 T 13-10-2018 Atc_0527 b9b78db482804c37fbc3ee41f9ca7457 315 SUPERFAMILY SSF53067 5 309 6.22E-50 T 13-10-2018 Atc_0527 b9b78db482804c37fbc3ee41f9ca7457 315 Gene3D G3DSA:3.30.420.40 142 294 4.0E-39 T 13-10-2018 Atc_0527 b9b78db482804c37fbc3ee41f9ca7457 315 Pfam PF00480 ROK family 6 310 5.6E-54 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Atc_2077 7522be650d198a44382f336e280432bf 270 Pfam PF00856 SET domain 140 242 2.7E-7 T 13-10-2018 IPR001214 SET domain GO:0005515 Atc_2077 7522be650d198a44382f336e280432bf 270 Gene3D G3DSA:2.170.270.10 127 247 1.3E-15 T 13-10-2018 Atc_2077 7522be650d198a44382f336e280432bf 270 SMART SM00317 129 249 0.0097 T 13-10-2018 IPR001214 SET domain GO:0005515 Atc_2077 7522be650d198a44382f336e280432bf 270 SUPERFAMILY SSF82199 113 244 4.45E-17 T 13-10-2018 Atc_1952 7e5f67a432a1bc1f47ad49b570092d3d 30 SUPERFAMILY SSF53098 1 30 7.4E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1045 b40ab9f4f0a1948c90373e237756ba4b 328 Gene3D G3DSA:3.40.50.11030 205 325 5.1E-10 T 13-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily Atc_1045 b40ab9f4f0a1948c90373e237756ba4b 328 SUPERFAMILY SSF55821 6 200 2.38E-58 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Atc_1045 b40ab9f4f0a1948c90373e237756ba4b 328 PIRSF PIRSF004930 1 322 3.9E-96 T 13-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 Atc_1045 b40ab9f4f0a1948c90373e237756ba4b 328 Gene3D G3DSA:3.90.870.10 1 204 2.1E-77 T 13-10-2018 Atc_1045 b40ab9f4f0a1948c90373e237756ba4b 328 Pfam PF03481 Putative GTP-binding controlling metal-binding 190 316 3.4E-14 T 13-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain Atc_1045 b40ab9f4f0a1948c90373e237756ba4b 328 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 198 1.5E-61 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Atc_1045 b40ab9f4f0a1948c90373e237756ba4b 328 Pfam PF01300 Telomere recombination 13 188 1.3E-53 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Atc_2631 b102a0cfc5d1bd9dc75f5707a1c24e6e 465 Pfam PF00083 Sugar (and other) transporter 32 449 6.7E-59 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atc_2631 b102a0cfc5d1bd9dc75f5707a1c24e6e 465 ProSitePatterns PS00217 Sugar transport proteins signature 2. 125 150 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atc_2631 b102a0cfc5d1bd9dc75f5707a1c24e6e 465 SUPERFAMILY SSF103473 15 449 4.19E-77 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_1083 c0eb4334d4f9b28c28c70c98a86c5553 98 SUPERFAMILY SSF52833 4 83 3.09E-14 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_1083 c0eb4334d4f9b28c28c70c98a86c5553 98 Pfam PF13192 Thioredoxin domain 4 81 7.1E-11 T 13-10-2018 IPR012336 Thioredoxin-like fold Atc_1083 c0eb4334d4f9b28c28c70c98a86c5553 98 Gene3D G3DSA:3.40.30.10 3 81 8.4E-19 T 13-10-2018 Atc_2579 0070750491d9f06acb73a095b6bfbb45 484 Pfam PF00361 Proton-conducting membrane transporter 115 408 1.2E-40 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2579 0070750491d9f06acb73a095b6bfbb45 484 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 27 465 1.2E-84 T 13-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2579 0070750491d9f06acb73a095b6bfbb45 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 121 140 8.4E-28 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2579 0070750491d9f06acb73a095b6bfbb45 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 226 250 8.4E-28 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2579 0070750491d9f06acb73a095b6bfbb45 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 150 174 8.4E-28 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2579 0070750491d9f06acb73a095b6bfbb45 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 366 392 8.4E-28 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2579 0070750491d9f06acb73a095b6bfbb45 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 314 333 8.4E-28 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2296 eae06d2e3aa4febf886dd2c8739b9174 241 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 122.656 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Atc_2296 eae06d2e3aa4febf886dd2c8739b9174 241 Gene3D G3DSA:3.20.20.70 1 241 1.0E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2296 eae06d2e3aa4febf886dd2c8739b9174 241 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 4 235 1.8E-98 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Atc_2296 eae06d2e3aa4febf886dd2c8739b9174 241 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 237 6.0E-95 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Atc_2296 eae06d2e3aa4febf886dd2c8739b9174 241 SUPERFAMILY SSF63892 1 240 1.57E-95 T 13-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Atc_2379 e9cb40ebab043af362f1f3e4b3d1ab96 321 SMART SM00729 83 292 7.3E-8 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atc_2379 e9cb40ebab043af362f1f3e4b3d1ab96 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 33 72 2.8E-7 T 13-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atc_2379 e9cb40ebab043af362f1f3e4b3d1ab96 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 148.068 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atc_2379 e9cb40ebab043af362f1f3e4b3d1ab96 321 Pfam PF04055 Radical SAM superfamily 91 250 5.3E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_2379 e9cb40ebab043af362f1f3e4b3d1ab96 321 PIRSF PIRSF005963 4 321 7.6E-128 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atc_2379 e9cb40ebab043af362f1f3e4b3d1ab96 321 SUPERFAMILY SSF102114 50 312 2.09E-62 T 13-10-2018 Atc_2379 e9cb40ebab043af362f1f3e4b3d1ab96 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 34 316 2.4E-127 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atc_2379 e9cb40ebab043af362f1f3e4b3d1ab96 321 Gene3D G3DSA:3.20.20.70 82 294 4.1E-14 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_0386 0ae68fc7ef6755ace5c181aa66113201 374 SUPERFAMILY SSF51735 10 370 1.0E-93 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_0386 0ae68fc7ef6755ace5c181aa66113201 374 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 11 360 4.2E-147 T 13-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Atc_0386 0ae68fc7ef6755ace5c181aa66113201 374 Pfam PF16363 GDP-mannose 4,6 dehydratase 13 346 2.1E-96 T 13-10-2018 IPR016040 NAD(P)-binding domain Atc_0386 0ae68fc7ef6755ace5c181aa66113201 374 Gene3D G3DSA:3.40.50.720 11 345 8.7E-125 T 13-10-2018 Atc_0386 0ae68fc7ef6755ace5c181aa66113201 374 Gene3D G3DSA:3.90.25.10 210 353 8.7E-125 T 13-10-2018 Atc_2p04 269f2f28f225b10f817cf7408b2d73d1 111 Pfam PF06412 Conjugal transfer protein TraD 40 95 3.7E-11 T 13-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 Atc_0532 a616720d0c08d176c670dc59c7c7dd7b 437 SUPERFAMILY SSF102114 111 359 5.89E-60 T 13-10-2018 Atc_0532 a616720d0c08d176c670dc59c7c7dd7b 437 Pfam PF00919 Uncharacterized protein family UPF0004 1 91 2.2E-20 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Atc_0532 a616720d0c08d176c670dc59c7c7dd7b 437 Pfam PF01938 TRAM domain 368 426 8.2E-11 T 13-10-2018 IPR002792 TRAM domain Atc_0532 a616720d0c08d176c670dc59c7c7dd7b 437 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 1 426 3.0E-149 T 13-10-2018 Atc_0532 a616720d0c08d176c670dc59c7c7dd7b 437 Gene3D G3DSA:3.40.50.12160 1 125 1.6E-25 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Atc_0532 a616720d0c08d176c670dc59c7c7dd7b 437 Gene3D G3DSA:3.80.30.20 133 365 1.3E-82 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Atc_0532 a616720d0c08d176c670dc59c7c7dd7b 437 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 428 69.681 T 13-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Atc_0532 a616720d0c08d176c670dc59c7c7dd7b 437 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 425 1.0E-133 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Atc_0532 a616720d0c08d176c670dc59c7c7dd7b 437 SMART SM00729 135 355 4.3E-59 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atc_0532 a616720d0c08d176c670dc59c7c7dd7b 437 Pfam PF04055 Radical SAM superfamily 139 313 8.2E-33 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_0532 a616720d0c08d176c670dc59c7c7dd7b 437 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 139 159 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Atc_2173 53752c68eb2e813ac82a1b22b1a931e2 208 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 204 39.931 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Atc_2173 53752c68eb2e813ac82a1b22b1a931e2 208 SUPERFAMILY SSF51366 3 201 2.51E-58 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atc_2173 53752c68eb2e813ac82a1b22b1a931e2 208 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 199 3.4E-40 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Atc_2173 53752c68eb2e813ac82a1b22b1a931e2 208 Gene3D G3DSA:3.20.20.70 2 205 1.1E-63 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2365 52f194060da5bb61817668d55c2b4bcf 132 Gene3D G3DSA:1.10.760.10 22 132 7.3E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_2365 52f194060da5bb61817668d55c2b4bcf 132 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 52 128 9.6E-7 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_2365 52f194060da5bb61817668d55c2b4bcf 132 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 52 131 6.8E-19 T 13-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX Atc_2365 52f194060da5bb61817668d55c2b4bcf 132 SUPERFAMILY SSF46626 19 132 5.42E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_1503 1afd83638a71850980cc8e5b45dfe8c1 230 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 28 225 7.8E-46 T 13-10-2018 IPR006214 Bax inhibitor 1-related Atc_0469 08789506c13b170d175f4b3316a87b2b 657 SUPERFAMILY SSF52540 50 358 5.03E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0469 08789506c13b170d175f4b3316a87b2b 657 Pfam PF00350 Dynamin family 64 285 6.4E-15 T 13-10-2018 IPR022812 Dynamin superfamily Atc_3p06 7f4acf37839d72707018fde70a3beec8 121 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 121 5.0E-50 T 13-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 Atc_3p06 7f4acf37839d72707018fde70a3beec8 121 Gene3D G3DSA:3.40.30.10 1 110 1.3E-46 T 13-10-2018 Atc_0587 1f7667e081e7eea2f6aab3bc83ec0534 110 Pfam PF06305 Lipopolysaccharide assembly protein A domain 19 81 1.8E-17 T 13-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 Atc_1643 aa6a1781254c7a600877673f47fe3df6 91 Gene3D G3DSA:1.10.760.10 2 83 1.1E-28 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_1643 aa6a1781254c7a600877673f47fe3df6 91 PRINTS PR00606 Class ID cytochrome C signature 71 81 2.2E-18 T 13-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 Atc_1643 aa6a1781254c7a600877673f47fe3df6 91 PRINTS PR00606 Class ID cytochrome C signature 60 70 2.2E-18 T 13-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 Atc_1643 aa6a1781254c7a600877673f47fe3df6 91 PRINTS PR00606 Class ID cytochrome C signature 7 20 2.2E-18 T 13-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 Atc_1643 aa6a1781254c7a600877673f47fe3df6 91 PRINTS PR00606 Class ID cytochrome C signature 45 58 2.2E-18 T 13-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 Atc_1643 aa6a1781254c7a600877673f47fe3df6 91 PRINTS PR00606 Class ID cytochrome C signature 22 35 2.2E-18 T 13-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 Atc_1643 aa6a1781254c7a600877673f47fe3df6 91 SUPERFAMILY SSF46626 4 82 1.92E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atc_1643 aa6a1781254c7a600877673f47fe3df6 91 Pfam PF00034 Cytochrome c 2 82 1.8E-7 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atc_1175 0ec0093fc63c397dd137f20413dcb43e 176 Pfam PF07419 PilM 56 148 2.9E-10 T 13-10-2018 IPR009987 PilM, inner membrane Atc_2639 e0b489d5425feef9e8d5472ccb5aa16a 369 SUPERFAMILY SSF53756 10 357 8.16E-36 T 13-10-2018 Atc_2639 e0b489d5425feef9e8d5472ccb5aa16a 369 Gene3D G3DSA:3.40.50.2000 6 183 1.7E-5 T 13-10-2018 Atc_2639 e0b489d5425feef9e8d5472ccb5aa16a 369 Gene3D G3DSA:3.40.50.2000 202 367 1.1E-21 T 13-10-2018 Atc_2639 e0b489d5425feef9e8d5472ccb5aa16a 369 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 245 335 2.7E-13 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Atc_2049 76119c475a1d03f29c0734e12d8301a6 155 SUPERFAMILY SSF54611 25 135 3.71E-7 T 13-10-2018 IPR035958 SecB-like superfamily Atc_2049 76119c475a1d03f29c0734e12d8301a6 155 Gene3D G3DSA:3.10.420.10 19 137 2.0E-5 T 13-10-2018 IPR035958 SecB-like superfamily Atc_2822 4467d1cc6758d0df712fd2333c6b2c68 142 SUPERFAMILY SSF75217 2 137 5.76E-35 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Atc_2822 4467d1cc6758d0df712fd2333c6b2c68 142 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 19 138 18.808 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Atc_2822 4467d1cc6758d0df712fd2333c6b2c68 142 Gene3D G3DSA:3.40.1280.10 1 142 1.3E-36 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atc_2822 4467d1cc6758d0df712fd2333c6b2c68 142 PIRSF PIRSF004505 1 138 9.7E-32 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Atc_2822 4467d1cc6758d0df712fd2333c6b2c68 142 Pfam PF02590 Predicted SPOUT methyltransferase 1 137 3.1E-34 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Atc_0109 9287f6fcca83fd2a71e1db065f3c6f00 164 Gene3D G3DSA:3.40.1260.10 36 162 1.9E-12 T 13-10-2018 IPR027396 DsrEFH-like Atc_0109 9287f6fcca83fd2a71e1db065f3c6f00 164 SUPERFAMILY SSF75169 39 161 7.65E-13 T 13-10-2018 IPR027396 DsrEFH-like Atc_0109 9287f6fcca83fd2a71e1db065f3c6f00 164 Pfam PF02635 DsrE/DsrF-like family 69 161 3.3E-5 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_0136 a02b9dc931d9fc2ae8082fb439e87485 30 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 5.2E-7 T 13-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 Atc_0495 1936cf5de1486d2680bac75dc2221092 534 Gene3D G3DSA:3.90.550.10 134 375 3.6E-86 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0495 1936cf5de1486d2680bac75dc2221092 534 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 16 531 5.4E-217 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atc_0495 1936cf5de1486d2680bac75dc2221092 534 SUPERFAMILY SSF53448 147 443 1.88E-46 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0495 1936cf5de1486d2680bac75dc2221092 534 Pfam PF00535 Glycosyl transferase family 2 148 337 1.2E-33 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atc_0495 1936cf5de1486d2680bac75dc2221092 534 PRINTS PR01439 Cellulose synthase subunit A signature 484 503 1.7E-12 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atc_0495 1936cf5de1486d2680bac75dc2221092 534 PRINTS PR01439 Cellulose synthase subunit A signature 70 90 1.7E-12 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atc_0495 1936cf5de1486d2680bac75dc2221092 534 PRINTS PR01439 Cellulose synthase subunit A signature 415 441 1.7E-12 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atc_0495 1936cf5de1486d2680bac75dc2221092 534 PRINTS PR01439 Cellulose synthase subunit A signature 154 173 1.7E-12 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atc_m023 a96849c98e7ed5c57ec32106db2ed9f2 160 Pfam PF04115 Ureidoglycolate lyase 37 125 4.3E-11 T 13-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 Atc_m023 a96849c98e7ed5c57ec32106db2ed9f2 160 Gene3D G3DSA:2.60.120.480 14 151 2.4E-15 T 13-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 Atc_m023 a96849c98e7ed5c57ec32106db2ed9f2 160 SUPERFAMILY SSF51182 18 113 2.8E-18 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Atc_1047 64827df205a6af7b29bd396412a2a097 105 Gene3D G3DSA:3.30.1490.100 1 85 3.5E-16 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atc_1047 64827df205a6af7b29bd396412a2a097 105 SUPERFAMILY SSF100879 2 81 9.61E-17 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atc_1047 64827df205a6af7b29bd396412a2a097 105 Pfam PF11799 impB/mucB/samB family C-terminal domain 5 83 4.9E-11 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atc_1037 05d63664e6a0afd69cc45d1294a2ac64 351 Pfam PF01609 Transposase DDE domain 170 342 8.4E-15 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1037 05d63664e6a0afd69cc45d1294a2ac64 351 Pfam PF05598 Transposase domain (DUF772) 53 127 5.4E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0171 05d63664e6a0afd69cc45d1294a2ac64 351 Pfam PF01609 Transposase DDE domain 170 342 8.4E-15 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0171 05d63664e6a0afd69cc45d1294a2ac64 351 Pfam PF05598 Transposase domain (DUF772) 53 127 5.4E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0951 1acb09b39c3ba3bf8daf5a2d377cace3 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 3.0E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0951 1acb09b39c3ba3bf8daf5a2d377cace3 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 3.0E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0951 1acb09b39c3ba3bf8daf5a2d377cace3 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 3.0E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0951 1acb09b39c3ba3bf8daf5a2d377cace3 97 SMART SM00418 16 94 9.1E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_0951 1acb09b39c3ba3bf8daf5a2d377cace3 97 Gene3D G3DSA:1.10.10.10 2 95 8.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0951 1acb09b39c3ba3bf8daf5a2d377cace3 97 SUPERFAMILY SSF46785 5 90 5.46E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0951 1acb09b39c3ba3bf8daf5a2d377cace3 97 Pfam PF01022 Bacterial regulatory protein, arsR family 24 67 1.8E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atc_1675 a3dba9f9e73a15f43d685d6cdf017acf 199 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 5 197 5.3E-56 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Atc_1675 a3dba9f9e73a15f43d685d6cdf017acf 199 SUPERFAMILY SSF52507 3 198 1.16E-54 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Atc_1675 a3dba9f9e73a15f43d685d6cdf017acf 199 Gene3D G3DSA:3.40.50.1950 1 199 3.2E-72 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Atc_1675 a3dba9f9e73a15f43d685d6cdf017acf 199 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 3 199 33.75 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Atc_1675 a3dba9f9e73a15f43d685d6cdf017acf 199 Pfam PF02441 Flavoprotein 4 178 2.0E-24 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Atc_1868 ef30fb3f203fa922f0f13f7b53169d0b 254 PIRSF PIRSF009120 1 248 1.4E-78 T 13-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 Atc_1868 ef30fb3f203fa922f0f13f7b53169d0b 254 Gene3D G3DSA:3.60.20.10 2 218 2.1E-21 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_1868 ef30fb3f203fa922f0f13f7b53169d0b 254 SUPERFAMILY SSF56235 2 240 5.9E-28 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atc_1674 80de7ac2a7c8d615e8d853e08d5ef2d8 458 Gene3D G3DSA:3.40.640.10 64 355 1.6E-84 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_1674 80de7ac2a7c8d615e8d853e08d5ef2d8 458 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 14 441 2.0E-204 T 13-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 Atc_1674 80de7ac2a7c8d615e8d853e08d5ef2d8 458 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 37 376 6.8E-76 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Atc_1674 80de7ac2a7c8d615e8d853e08d5ef2d8 458 Gene3D G3DSA:3.90.1150.160 357 458 7.7E-30 T 13-10-2018 Atc_1674 80de7ac2a7c8d615e8d853e08d5ef2d8 458 SUPERFAMILY SSF53383 4 441 2.87E-133 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_1634 dc92539ecd446d8f8bc4c248f3cd33ee 518 Pfam PF13520 Amino acid permease 12 422 7.9E-30 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_1634 dc92539ecd446d8f8bc4c248f3cd33ee 518 PIRSF PIRSF006060 1 445 1.9E-56 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_1634 dc92539ecd446d8f8bc4c248f3cd33ee 518 PIRSF PIRSF006060 407 518 12.0 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_1634 dc92539ecd446d8f8bc4c248f3cd33ee 518 Gene3D G3DSA:1.20.1740.10 7 455 4.6E-47 T 13-10-2018 Atc_1069 0ed7f1c1ee3dc295c10eda62445b3170 116 SUPERFAMILY SSF75169 1 90 3.53E-9 T 13-10-2018 IPR027396 DsrEFH-like Atc_1069 0ed7f1c1ee3dc295c10eda62445b3170 116 Gene3D G3DSA:3.40.1260.10 1 116 2.4E-14 T 13-10-2018 IPR027396 DsrEFH-like Atc_1069 0ed7f1c1ee3dc295c10eda62445b3170 116 Pfam PF02635 DsrE/DsrF-like family 6 116 1.5E-7 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_1919 5fd35b9920921a3f817dd6f64f00cfe2 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 286 1.8E-27 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Atc_1919 5fd35b9920921a3f817dd6f64f00cfe2 338 Pfam PF01548 Transposase 7 147 9.5E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Atc_0243 76c89ef8277c89214e60212cae1b086c 699 Gene3D G3DSA:1.20.1740.10 30 484 4.6E-21 T 13-10-2018 Atc_0243 76c89ef8277c89214e60212cae1b086c 699 Pfam PF13520 Amino acid permease 53 461 3.9E-20 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atc_2834 13ff3933480cb215433c82e54846b7ea 277 Gene3D G3DSA:3.40.50.300 7 259 1.2E-63 T 13-10-2018 Atc_2834 13ff3933480cb215433c82e54846b7ea 277 Pfam PF00005 ABC transporter 25 173 1.9E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atc_2834 13ff3933480cb215433c82e54846b7ea 277 SUPERFAMILY SSF52540 9 238 4.33E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2834 13ff3933480cb215433c82e54846b7ea 277 SMART SM00382 34 231 2.5E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Atc_0111 5ec4f38c9a3e72e652718fbbc83bdf0f 301 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 88 261 1.7E-10 T 13-10-2018 IPR018713 Domain of unknown function DUF2236 Atc_0917 25270e7f814cbd4c4a2a24b039d2de06 666 Pfam PF01841 Transglutaminase-like superfamily 362 477 4.3E-21 T 13-10-2018 IPR002931 Transglutaminase-like Atc_0917 25270e7f814cbd4c4a2a24b039d2de06 666 Pfam PF11992 Domain of unknown function (DUF3488) 5 330 3.6E-42 T 13-10-2018 IPR021878 Protein of unknown function DUF3488 Atc_0917 25270e7f814cbd4c4a2a24b039d2de06 666 SMART SM00460 408 479 5.5E-18 T 13-10-2018 IPR002931 Transglutaminase-like Atc_0917 25270e7f814cbd4c4a2a24b039d2de06 666 SUPERFAMILY SSF54001 339 529 6.17E-41 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Atc_0917 25270e7f814cbd4c4a2a24b039d2de06 666 Gene3D G3DSA:3.10.620.30 338 503 5.1E-17 T 13-10-2018 Atc_2216 5a3279ab22f705739984b2b7b383b4c0 102 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 3 99 8.8E-35 T 13-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ Atc_2216 5a3279ab22f705739984b2b7b383b4c0 102 SUPERFAMILY SSF81296 2 101 1.26E-31 T 13-10-2018 IPR014756 Immunoglobulin E-set Atc_2216 5a3279ab22f705739984b2b7b383b4c0 102 Pfam PF08770 Sulphur oxidation protein SoxZ 7 97 7.8E-35 T 13-10-2018 IPR014880 Sulphur oxidation protein SoxZ Atc_2216 5a3279ab22f705739984b2b7b383b4c0 102 Gene3D G3DSA:2.60.40.10 1 102 1.7E-37 T 13-10-2018 IPR013783 Immunoglobulin-like fold Atc_m044 1fe14af023c42e2b827c544cef6602ae 110 SUPERFAMILY SSF56024 8 98 4.19E-12 T 13-10-2018 Atc_m044 1fe14af023c42e2b827c544cef6602ae 110 Pfam PF13091 PLD-like domain 21 93 1.8E-10 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atc_m044 1fe14af023c42e2b827c544cef6602ae 110 Gene3D G3DSA:3.30.870.10 8 100 2.0E-11 T 13-10-2018 Atc_0622 c8b9c7b9a03cf06d696a64e2e0084547 65 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 6 63 16.553 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0622 c8b9c7b9a03cf06d696a64e2e0084547 65 Gene3D G3DSA:3.30.1390.20 6 64 1.0E-19 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Atc_0622 c8b9c7b9a03cf06d696a64e2e0084547 65 SUPERFAMILY SSF55129 8 63 1.31E-15 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Atc_0622 c8b9c7b9a03cf06d696a64e2e0084547 65 Pfam PF00327 Ribosomal protein L30p/L7e 10 58 1.3E-15 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Atc_0622 c8b9c7b9a03cf06d696a64e2e0084547 65 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 10 61 1.3E-17 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_0622 c8b9c7b9a03cf06d696a64e2e0084547 65 PIRSF PIRSF002211 3 65 2.0E-20 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atc_m089 30d2d16ea7371023f718ae928e661a93 81 SUPERFAMILY SSF52833 4 79 1.94E-14 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_m089 30d2d16ea7371023f718ae928e661a93 81 Gene3D G3DSA:3.40.30.10 4 77 6.2E-15 T 13-10-2018 Atc_m089 30d2d16ea7371023f718ae928e661a93 81 Pfam PF00462 Glutaredoxin 5 61 3.3E-14 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Atc_1146 08de8afb2437da8d62fcc078444cc8b6 1058 Gene3D G3DSA:3.40.50.300 665 761 2.0E-16 T 13-10-2018 Atc_1146 08de8afb2437da8d62fcc078444cc8b6 1058 SMART SM00487 288 525 4.4E-7 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_1146 08de8afb2437da8d62fcc078444cc8b6 1058 Gene3D G3DSA:3.90.1570.50 124 193 4.4E-6 T 13-10-2018 Atc_1146 08de8afb2437da8d62fcc078444cc8b6 1058 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 133 227 1.0E-12 T 13-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Atc_1146 08de8afb2437da8d62fcc078444cc8b6 1058 Pfam PF04851 Type III restriction enzyme, res subunit 292 496 1.7E-13 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Atc_1146 08de8afb2437da8d62fcc078444cc8b6 1058 Gene3D G3DSA:3.40.50.300 292 457 1.4E-20 T 13-10-2018 Atc_1146 08de8afb2437da8d62fcc078444cc8b6 1058 SUPERFAMILY SSF52540 258 504 5.8E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1013 fc325bddc0f6518136d15cd521e2e687 341 SUPERFAMILY SSF53659 2 331 2.96E-102 T 13-10-2018 Atc_1013 fc325bddc0f6518136d15cd521e2e687 341 Gene3D G3DSA:3.40.718.10 2 340 3.3E-130 T 13-10-2018 Atc_1013 fc325bddc0f6518136d15cd521e2e687 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 337 140.937 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Atc_1013 fc325bddc0f6518136d15cd521e2e687 341 PIRSF PIRSF002465 1 336 6.8E-125 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Atc_1013 fc325bddc0f6518136d15cd521e2e687 341 Pfam PF02504 Fatty acid synthesis protein 3 320 1.4E-104 T 13-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Atc_1013 fc325bddc0f6518136d15cd521e2e687 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 331 8.7E-109 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Atc_2190 a357318b8c0c281c90cf2d44652aaeab 175 Pfam PF03843 Outer membrane lipoprotein Slp family 34 150 1.8E-27 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Atc_0920 eb9b9ee4f116f21a3b289245a28eae22 120 Gene3D G3DSA:3.40.1260.10 2 116 3.6E-24 T 13-10-2018 IPR027396 DsrEFH-like Atc_0920 eb9b9ee4f116f21a3b289245a28eae22 120 SUPERFAMILY SSF75169 1 112 2.06E-19 T 13-10-2018 IPR027396 DsrEFH-like Atc_0920 eb9b9ee4f116f21a3b289245a28eae22 120 Pfam PF02635 DsrE/DsrF-like family 4 112 5.8E-14 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_1738 cd77ca6d89b96367fad97faccd1694f3 203 SUPERFAMILY SSF160246 7 66 4.45E-11 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Atc_2405 cb3673792a02ac4be22c943ae951c1c7 280 Pfam PF03618 Kinase/pyrophosphorylase 10 267 6.7E-64 T 13-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 Atc_2405 cb3673792a02ac4be22c943ae951c1c7 280 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 279 67.256 T 13-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein Atc_2291 6d06c48db94f312425ec3bef7992ede6 281 Gene3D G3DSA:3.55.30.10 1 170 2.6E-31 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Atc_2291 6d06c48db94f312425ec3bef7992ede6 281 Gene3D G3DSA:3.90.1280.10 217 277 1.3E-17 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Atc_2291 6d06c48db94f312425ec3bef7992ede6 281 Pfam PF01430 Hsp33 protein 3 265 1.5E-51 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Atc_2291 6d06c48db94f312425ec3bef7992ede6 281 SUPERFAMILY SSF64397 5 228 6.67E-34 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Atc_2291 6d06c48db94f312425ec3bef7992ede6 281 SUPERFAMILY SSF118352 218 275 3.14E-16 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Atc_2291 6d06c48db94f312425ec3bef7992ede6 281 PIRSF PIRSF005261 2 278 1.1E-48 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Atc_0156 83b8be153adecb0354afebfa446634ab 174 SUPERFAMILY SSF52317 2 126 1.26E-37 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_0156 83b8be153adecb0354afebfa446634ab 174 Gene3D G3DSA:3.40.50.880 1 167 4.8E-54 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_0156 83b8be153adecb0354afebfa446634ab 174 Pfam PF01965 DJ-1/PfpI family 2 102 2.4E-23 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atc_2582 d38804c8d30c5a2838fb75d95e905b66 419 PIRSF PIRSF003085 6 405 3.4E-128 T 13-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Atc_2582 d38804c8d30c5a2838fb75d95e905b66 419 Pfam PF02353 Mycolic acid cyclopropane synthetase 109 383 1.6E-100 T 13-10-2018 Atc_2582 d38804c8d30c5a2838fb75d95e905b66 419 SUPERFAMILY SSF53335 120 387 1.13E-75 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2582 d38804c8d30c5a2838fb75d95e905b66 419 Gene3D G3DSA:3.40.50.150 118 391 3.3E-101 T 13-10-2018 Atc_2810 850ecb5af438e82f0b6277dc6f99a42a 211 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 144 210 3.6E-8 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Atc_2810 850ecb5af438e82f0b6277dc6f99a42a 211 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 145 211 1.4E-6 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Atc_2810 850ecb5af438e82f0b6277dc6f99a42a 211 SUPERFAMILY SSF74653 102 211 1.44E-11 T 13-10-2018 Atc_2810 850ecb5af438e82f0b6277dc6f99a42a 211 Gene3D G3DSA:3.30.1150.10 91 211 2.1E-10 T 13-10-2018 Atc_m080 ba5477ed2e894b31a0d3e41046bf1f70 248 SUPERFAMILY SSF81342 13 205 9.42E-28 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Atc_m080 ba5477ed2e894b31a0d3e41046bf1f70 248 Gene3D G3DSA:1.20.950.20 2 188 3.7E-33 T 13-10-2018 Atc_m080 ba5477ed2e894b31a0d3e41046bf1f70 248 Pfam PF01292 Prokaryotic cytochrome b561 14 199 1.5E-22 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Atc_2108 acbbdce6faf0b8e46b2d6df932777979 813 Pfam PF13476 AAA domain 5 289 2.4E-8 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain Atc_2108 acbbdce6faf0b8e46b2d6df932777979 813 Gene3D G3DSA:3.40.50.300 1 262 2.1E-15 T 13-10-2018 Atc_2108 acbbdce6faf0b8e46b2d6df932777979 813 SUPERFAMILY SSF52540 1 778 1.39E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_2108 acbbdce6faf0b8e46b2d6df932777979 813 Gene3D G3DSA:3.40.50.300 560 812 9.9E-17 T 13-10-2018 Atc_0653 a1bc6473bbf5e4d1563eb0cb533a35d4 396 Pfam PF07690 Major Facilitator Superfamily 14 292 6.5E-32 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_0653 a1bc6473bbf5e4d1563eb0cb533a35d4 396 SUPERFAMILY SSF103473 3 385 1.83E-54 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_0653 a1bc6473bbf5e4d1563eb0cb533a35d4 396 Gene3D G3DSA:1.20.1250.20 2 381 2.0E-70 T 13-10-2018 Atc_2765 5dfc1571975254a30cced3736d1dbc43 256 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 44 210 2.3E-19 T 13-10-2018 IPR003734 Domain of unknown function DUF155 Atc_1437 6dfecb3d772ad2df4ebf24bcfe889563 400 Gene3D G3DSA:3.50.50.60 92 258 9.3E-67 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1437 6dfecb3d772ad2df4ebf24bcfe889563 400 SUPERFAMILY SSF51905 101 323 1.21E-7 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1437 6dfecb3d772ad2df4ebf24bcfe889563 400 Gene3D G3DSA:3.50.50.60 1 312 9.3E-67 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_1437 6dfecb3d772ad2df4ebf24bcfe889563 400 SUPERFAMILY SSF51905 2 314 6.13E-17 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atc_2630 dcf4e5787349a022f5f2bd434d4f68a8 168 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 15 165 3.4E-57 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Atc_2630 dcf4e5787349a022f5f2bd434d4f68a8 168 PIRSF PIRSF029256 14 167 2.2E-62 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Atc_2630 dcf4e5787349a022f5f2bd434d4f68a8 168 Gene3D G3DSA:3.40.1280.10 5 168 2.7E-64 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atc_2630 dcf4e5787349a022f5f2bd434d4f68a8 168 Pfam PF00588 SpoU rRNA Methylase family 17 155 3.2E-29 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Atc_2630 dcf4e5787349a022f5f2bd434d4f68a8 168 SUPERFAMILY SSF75217 16 164 1.44E-41 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Atc_2630 dcf4e5787349a022f5f2bd434d4f68a8 168 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 15 165 32.066 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Atc_1999 8bd87597c23b9efef471ed577f0268f1 89 Pfam PF14239 RRXRR protein 3 81 1.8E-25 T 13-10-2018 IPR025938 RRXRR domain Atc_0020 9d6e71ed739cf1e711b4908f016275cc 139 Gene3D G3DSA:3.40.50.150 22 135 3.5E-16 T 13-10-2018 Atc_0020 9d6e71ed739cf1e711b4908f016275cc 139 Pfam PF03848 Tellurite resistance protein TehB 39 93 2.6E-8 T 13-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain Atc_0020 9d6e71ed739cf1e711b4908f016275cc 139 SUPERFAMILY SSF53335 22 120 2.13E-15 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0230 ed7591592e92698833027c3aee24bf68 177 Gene3D G3DSA:1.20.1290.10 13 174 2.1E-22 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atc_0230 ed7591592e92698833027c3aee24bf68 177 SUPERFAMILY SSF69118 3 173 5.28E-33 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atc_m159 2cc90f47c58fe0d64af953a72b02a7dd 99 Pfam PF13488 Glycine zipper 27 70 2.2E-8 T 13-10-2018 IPR039567 Glycine zipper domain Atc_1541 f87ca830bd428288262f9dcad801d1cc 313 SUPERFAMILY SSF143865 28 243 2.09E-10 T 13-10-2018 Atc_1541 f87ca830bd428288262f9dcad801d1cc 313 Pfam PF01544 CorA-like Mg2+ transporter protein 64 300 2.5E-19 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Atc_1794 f5a69a827181871e2f03c142b4648c95 133 Pfam PF13767 Domain of unknown function (DUF4168) 51 125 1.3E-8 T 13-10-2018 IPR025433 Domain of unknown function DUF4168 Atc_1489 0d39a4adb6b4b3255de71d7b12a0dd09 396 Gene3D G3DSA:3.30.750.140 253 367 9.2E-30 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Atc_1489 0d39a4adb6b4b3255de71d7b12a0dd09 396 Pfam PF02120 Flagellar hook-length control protein FliK 274 355 3.5E-21 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Atc_1025 cab38214a193d8f00d01516d931c16ad 786 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 15 689 1.5E-167 T 13-10-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY Atc_2710 06de2ca3ebda4c5c029f74e753e4b932 113 Gene3D G3DSA:2.20.130.30 39 113 9.4E-19 T 13-10-2018 Atc_2710 06de2ca3ebda4c5c029f74e753e4b932 113 Pfam PF11191 Protein of unknown function (DUF2782) 38 113 2.2E-23 T 13-10-2018 IPR021357 Protein of unknown function DUF2782 Atc_0943 d806896dac30e3fd374893f67c2b0523 267 Pfam PF07728 AAA domain (dynein-related subfamily) 36 169 1.8E-30 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Atc_0943 d806896dac30e3fd374893f67c2b0523 267 SUPERFAMILY SSF52540 20 225 7.47E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0943 d806896dac30e3fd374893f67c2b0523 267 Gene3D G3DSA:3.40.50.300 19 187 4.9E-29 T 13-10-2018 Atc_0943 d806896dac30e3fd374893f67c2b0523 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 182 264 1.3E-31 T 13-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Atc_1724 908d1f8865571930b3e1394af2efcd06 148 Pfam PF10116 Protein required for attachment to host cells 5 142 4.8E-39 T 13-10-2018 IPR019291 Host attachment protein Atc_0914 038c1853966049915336b800f01761a3 476 SUPERFAMILY SSF53383 19 470 9.26E-102 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atc_0914 038c1853966049915336b800f01761a3 476 Gene3D G3DSA:3.90.1150.10 327 460 7.4E-42 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atc_0914 038c1853966049915336b800f01761a3 476 Pfam PF02347 Glycine cleavage system P-protein 19 284 1.2E-8 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Atc_0914 038c1853966049915336b800f01761a3 476 Gene3D G3DSA:3.40.640.10 70 297 3.8E-53 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atc_1149 8ab59a174d70099a418b757ebb530bf6 313 SUPERFAMILY SSF56024 194 300 4.26E-13 T 13-10-2018 Atc_1149 8ab59a174d70099a418b757ebb530bf6 313 SUPERFAMILY SSF56024 5 150 8.07E-26 T 13-10-2018 Atc_1149 8ab59a174d70099a418b757ebb530bf6 313 Gene3D G3DSA:3.30.870.10 4 152 4.4E-27 T 13-10-2018 Atc_1149 8ab59a174d70099a418b757ebb530bf6 313 Gene3D G3DSA:3.30.870.10 165 293 3.4E-16 T 13-10-2018 Atc_1149 8ab59a174d70099a418b757ebb530bf6 313 Pfam PF13091 PLD-like domain 14 148 3.2E-20 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atc_1149 8ab59a174d70099a418b757ebb530bf6 313 Pfam PF13091 PLD-like domain 197 291 1.4E-12 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atc_2038 f42a00cf0b8c1821c5c7759efedfeead 272 Gene3D G3DSA:2.60.40.2500 178 272 3.2E-17 T 13-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Atc_2038 f42a00cf0b8c1821c5c7759efedfeead 272 Pfam PF03524 Conjugal transfer protein 49 271 6.3E-55 T 13-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Atc_2387 1978269ae424a4b508719e4b2a25fe59 120 Pfam PF03259 Roadblock/LC7 domain 15 96 5.2E-16 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Atc_2387 1978269ae424a4b508719e4b2a25fe59 120 Gene3D G3DSA:3.30.450.30 2 120 4.3E-30 T 13-10-2018 Atc_2387 1978269ae424a4b508719e4b2a25fe59 120 SMART SM00960 6 96 2.0E-22 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Atc_2387 1978269ae424a4b508719e4b2a25fe59 120 SUPERFAMILY SSF103196 4 120 8.2E-30 T 13-10-2018 Atc_1285 76bfa9b5389d3026f7ecdbf2b9fa6b38 388 SUPERFAMILY SSF110849 20 81 1.38E-13 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atc_1285 76bfa9b5389d3026f7ecdbf2b9fa6b38 388 Gene3D G3DSA:3.90.1530.30 21 79 4.6E-12 T 13-10-2018 Atc_1285 76bfa9b5389d3026f7ecdbf2b9fa6b38 388 Pfam PF02195 ParB-like nuclease domain 22 82 8.7E-12 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_1285 76bfa9b5389d3026f7ecdbf2b9fa6b38 388 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 219 355 8.7E-14 T 13-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 Atc_1285 76bfa9b5389d3026f7ecdbf2b9fa6b38 388 SMART SM00470 10 91 5.3E-15 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Atc_1646 1a4c580288beff11b978dde5194256c0 336 SUPERFAMILY SSF51735 5 333 2.71E-93 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Atc_1646 1a4c580288beff11b978dde5194256c0 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 262 4.2E-62 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atc_1646 1a4c580288beff11b978dde5194256c0 336 PRINTS PR01713 Nucleotide sugar epimerase signature 219 234 5.3E-27 T 13-10-2018 Atc_1646 1a4c580288beff11b978dde5194256c0 336 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 5.3E-27 T 13-10-2018 Atc_1646 1a4c580288beff11b978dde5194256c0 336 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 5.3E-27 T 13-10-2018 Atc_1646 1a4c580288beff11b978dde5194256c0 336 PRINTS PR01713 Nucleotide sugar epimerase signature 32 48 5.3E-27 T 13-10-2018 Atc_1646 1a4c580288beff11b978dde5194256c0 336 Gene3D G3DSA:3.40.50.720 5 335 2.0E-97 T 13-10-2018 Atc_1225 70edca35b8ee17f53e488c3bf611872c 74 ProDom PD028561 MEMBRANE IMMUNITY SUPERINFECTION GP66 PROTEIN IMM GP75 IMM RB69 INTEGRAL 20 56 3.0E-7 T 13-10-2018 IPR016410 Bacteriophage-associated immunity protein Atc_1225 70edca35b8ee17f53e488c3bf611872c 74 Pfam PF14373 Superinfection immunity protein 16 57 1.1E-18 T 13-10-2018 IPR016410 Bacteriophage-associated immunity protein Atc_0668 b7963ff41d6b15e7c7889fff6eea06f4 119 Pfam PF09685 Domain of unknown function (DUF4870) 18 118 2.1E-27 T 13-10-2018 IPR019109 Protein of unknown function DUF4870 Atc_0269 bc4071874fe2258f8525ac1da2d89fc4 185 Gene3D G3DSA:3.40.1740.10 1 185 2.6E-67 T 13-10-2018 Atc_0269 bc4071874fe2258f8525ac1da2d89fc4 185 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 185 35.96 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 Atc_0269 bc4071874fe2258f8525ac1da2d89fc4 185 SUPERFAMILY SSF143456 5 185 2.49E-61 T 13-10-2018 Atc_0269 bc4071874fe2258f8525ac1da2d89fc4 185 Pfam PF02622 Uncharacterized ACR, COG1678 15 172 1.8E-47 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 Atc_1989 3585669dbb9a6334b55d3f7946f29755 131 Gene3D G3DSA:2.40.50.140 10 120 1.9E-6 T 13-10-2018 Atc_1989 3585669dbb9a6334b55d3f7946f29755 131 SUPERFAMILY SSF50249 10 127 8.91E-11 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atc_0348 61225d89f839498ea37f3426b9d9dbca 78 Pfam PF02416 mttA/Hcf106 family 5 53 4.2E-14 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Atc_0348 61225d89f839498ea37f3426b9d9dbca 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 76 21.402 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Atc_0348 61225d89f839498ea37f3426b9d9dbca 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 1.4E-20 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Atc_1984 4c46b20fe0f9f74dac0540c4dfdbd1b8 89 SUPERFAMILY SSF143880 17 84 2.62E-15 T 13-10-2018 IPR036782 NE0471-like, N-terminal Atc_1984 4c46b20fe0f9f74dac0540c4dfdbd1b8 89 Pfam PF10387 Protein of unknown function (DUF2442) 13 79 7.4E-11 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Atc_0299 099d828a7b69c16adc94082fec097a43 127 Pfam PF04379 ApaG domain 19 103 6.7E-36 T 13-10-2018 IPR007474 ApaG domain Atc_0299 099d828a7b69c16adc94082fec097a43 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 32.781 T 13-10-2018 IPR023065 Uncharacterised protein family ApaG Atc_0299 099d828a7b69c16adc94082fec097a43 127 Gene3D G3DSA:2.60.40.1470 3 127 2.1E-49 T 13-10-2018 IPR036767 ApaG domain superfamily Atc_0299 099d828a7b69c16adc94082fec097a43 127 SUPERFAMILY SSF110069 8 127 6.8E-47 T 13-10-2018 IPR036767 ApaG domain superfamily Atc_2745 67659b42542e65bf4bda83efa7b12030 128 Gene3D G3DSA:2.60.120.1140 14 122 1.6E-9 T 13-10-2018 IPR038695 Saro_0823-like superfamily Atc_2745 67659b42542e65bf4bda83efa7b12030 128 Pfam PF02643 Uncharacterized ACR, COG1430 18 115 7.1E-18 T 13-10-2018 IPR003795 Protein of unknown function DUF192 Atc_m090 bd25a928bc65bc3e2cc588388c1f8ade 287 Pfam PF14342 Domain of unknown function (DUF4396) 71 208 1.2E-35 T 13-10-2018 IPR025509 Domain of unknown function DUF4396 Atc_1093 ec2e0384cbea3b7036b2fb5f8f1ba060 210 SUPERFAMILY SSF101874 37 210 1.96E-52 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Atc_1093 ec2e0384cbea3b7036b2fb5f8f1ba060 210 SMART SM00867 39 208 1.3E-64 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Atc_1093 ec2e0384cbea3b7036b2fb5f8f1ba060 210 Pfam PF04264 YceI-like domain 40 206 2.4E-42 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Atc_1093 ec2e0384cbea3b7036b2fb5f8f1ba060 210 Gene3D G3DSA:2.40.128.110 37 210 2.6E-50 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Atc_m199 cfe64e99a5fcecbe25eb54e4cbaf8de1 340 Pfam PF05598 Transposase domain (DUF772) 58 130 8.0E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_m199 cfe64e99a5fcecbe25eb54e4cbaf8de1 340 Pfam PF01609 Transposase DDE domain 145 332 1.1E-28 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1928 31a6e20cb6f807d561def6963247fd36 353 Pfam PF03595 Voltage-dependent anion channel 19 341 5.4E-48 T 13-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 Atc_1663 902dc8080c0fc0fdb30ef19c34faebe7 756 SMART SM00327 565 748 3.2E-12 T 13-10-2018 IPR002035 von Willebrand factor, type A Atc_1663 902dc8080c0fc0fdb30ef19c34faebe7 756 Pfam PF00092 von Willebrand factor type A domain 568 720 6.4E-6 T 13-10-2018 IPR002035 von Willebrand factor, type A Atc_1663 902dc8080c0fc0fdb30ef19c34faebe7 756 Gene3D G3DSA:3.40.50.410 560 750 1.1E-15 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atc_1663 902dc8080c0fc0fdb30ef19c34faebe7 756 SUPERFAMILY SSF53300 566 750 3.5E-20 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atc_0705 12f4bc2bd8454fa128d56904d015306c 313 Pfam PF02470 MlaD protein 45 112 5.6E-14 T 13-10-2018 IPR003399 Mce/MlaD Atc_0983 be02d8fefc444ff68e693e17e61043a5 341 SUPERFAMILY SSF46689 24 141 8.42E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atc_0983 be02d8fefc444ff68e693e17e61043a5 341 Pfam PF13384 Homeodomain-like domain 28 76 1.3E-8 T 13-10-2018 Atc_m176 4548bba2b72dd8108801e6207461f479 115 Pfam PF05717 IS66 Orf2 like protein 8 102 2.0E-37 T 13-10-2018 IPR008878 Transposase IS66, Orf2 Atc_m248 4548bba2b72dd8108801e6207461f479 115 Pfam PF05717 IS66 Orf2 like protein 8 102 2.0E-37 T 13-10-2018 IPR008878 Transposase IS66, Orf2 Atc_m180 f31149dff69aef9856453ce78430e040 219 SUPERFAMILY SSF56672 2 161 1.51E-10 T 13-10-2018 Atc_m180 f31149dff69aef9856453ce78430e040 219 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 1 101 2.5E-11 T 13-10-2018 IPR000477 Reverse transcriptase domain Atc_2513 38a0e7c843ef5c58dfe404c4b7d7d954 405 PIRSF PIRSF003085 10 405 3.6E-122 T 13-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Atc_2513 38a0e7c843ef5c58dfe404c4b7d7d954 405 Gene3D G3DSA:3.40.50.150 137 405 1.2E-95 T 13-10-2018 Atc_2513 38a0e7c843ef5c58dfe404c4b7d7d954 405 Pfam PF02353 Mycolic acid cyclopropane synthetase 131 400 5.7E-83 T 13-10-2018 Atc_2513 38a0e7c843ef5c58dfe404c4b7d7d954 405 SUPERFAMILY SSF53335 139 402 1.31E-73 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_m060 3cd7c7aeeea746814b78ebc9671303b8 305 Pfam PF04986 Putative transposase 52 241 1.0E-63 T 13-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 Atc_2192 c2a9114b1e995529f158e4f8b41733f3 371 Pfam PF12698 ABC-2 family transporter protein 24 363 6.6E-47 T 13-10-2018 Atc_0011 f5382c876fcd94e685a666f8258f0ad8 145 Pfam PF04361 Protein of unknown function (DUF494) 4 145 2.2E-33 T 13-10-2018 IPR007456 Smg Atc_0011 f5382c876fcd94e685a666f8258f0ad8 145 Hamap MF_00598 Protein Smg [smg]. 4 145 15.652 T 13-10-2018 IPR007456 Smg Atc_2237 da8e62919d9f7747ae81c12ba2cdf5f8 387 TIGRFAM TIGR03472 HpnI: hopanoid biosynthesis associated glycosyl transferase protein HpnI 6 379 1.0E-112 T 13-10-2018 IPR017835 Hopanoid biosynthesis associated glycosyltransferase, HpnI Atc_2237 da8e62919d9f7747ae81c12ba2cdf5f8 387 Pfam PF13506 Glycosyl transferase family 21 108 280 1.7E-41 T 13-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 Atc_2237 da8e62919d9f7747ae81c12ba2cdf5f8 387 SUPERFAMILY SSF53448 50 328 7.74E-31 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2237 da8e62919d9f7747ae81c12ba2cdf5f8 387 Gene3D G3DSA:3.90.550.10 44 262 3.0E-20 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_1267 5e900af01375190489ff74ca8e6fccda 96 SUPERFAMILY SSF47729 7 95 8.83E-24 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_1267 5e900af01375190489ff74ca8e6fccda 96 Pfam PF00216 Bacterial DNA-binding protein 7 95 2.6E-24 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_1267 5e900af01375190489ff74ca8e6fccda 96 Gene3D G3DSA:4.10.520.10 2 96 1.3E-24 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atc_1267 5e900af01375190489ff74ca8e6fccda 96 SMART SM00411 6 95 2.5E-26 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atc_0531 236653d0973bfe39005166d82df7fc3f 503 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 17 473 3.7E-123 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 Atc_0531 236653d0973bfe39005166d82df7fc3f 503 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 13 489 43.794 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 Atc_1229 1adfe66cc3d8876b613503f07179f7f8 232 Gene3D G3DSA:3.40.50.1110 41 230 5.8E-7 T 13-10-2018 IPR036514 SGNH hydrolase superfamily Atc_1229 1adfe66cc3d8876b613503f07179f7f8 232 SUPERFAMILY SSF52266 56 224 3.16E-12 T 13-10-2018 Atc_0699 790b68ffa8f0c7b831083f77e950f21d 103 Gene3D G3DSA:1.10.20.30 6 51 6.7E-6 T 13-10-2018 Atc_0699 790b68ffa8f0c7b831083f77e950f21d 103 Pfam PF05164 Cell division protein ZapA 11 95 1.0E-14 T 13-10-2018 IPR007838 Cell division protein ZapA-like Atc_0699 790b68ffa8f0c7b831083f77e950f21d 103 SUPERFAMILY SSF102829 11 96 5.36E-14 T 13-10-2018 IPR036192 Cell division protein ZapA-like superfamily Atc_0678 22bd85b9d34c68b860037268c25213a5 132 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 128 8.8E-26 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Atc_0678 22bd85b9d34c68b860037268c25213a5 132 Gene3D G3DSA:3.30.420.270 57 124 3.9E-7 T 13-10-2018 Atc_1231 5412518c09f7b25930a481575bd0f221 197 SUPERFAMILY SSF56784 45 190 5.43E-9 T 13-10-2018 IPR036412 HAD-like superfamily Atc_2081 3f622c175632ff882ea3e240229e0dc2 346 Pfam PF00872 Transposase, Mutator family 18 346 4.5E-63 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Atc_0294 ab09505b5bc7d4b1afa8302fb5935de3 178 SUPERFAMILY SSF88659 100 162 5.98E-18 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atc_0294 ab09505b5bc7d4b1afa8302fb5935de3 178 Pfam PF08281 Sigma-70, region 4 106 158 2.4E-19 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atc_0294 ab09505b5bc7d4b1afa8302fb5935de3 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 160 1.4E-18 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atc_0294 ab09505b5bc7d4b1afa8302fb5935de3 178 Gene3D G3DSA:1.10.10.10 104 164 3.1E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_0294 ab09505b5bc7d4b1afa8302fb5935de3 178 SUPERFAMILY SSF88946 6 96 7.85E-15 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atc_0294 ab09505b5bc7d4b1afa8302fb5935de3 178 Pfam PF04542 Sigma-70 region 2 18 82 1.2E-9 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atc_0294 ab09505b5bc7d4b1afa8302fb5935de3 178 Gene3D G3DSA:1.10.1740.10 2 79 3.7E-10 T 13-10-2018 Atc_0491 5a8cb1fc905cd399ac4f6a82846d8eab 845 Gene3D G3DSA:2.60.120.260 363 495 1.4E-20 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Atc_0491 5a8cb1fc905cd399ac4f6a82846d8eab 845 Gene3D G3DSA:2.60.120.260 60 185 1.7E-20 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Atc_0491 5a8cb1fc905cd399ac4f6a82846d8eab 845 Pfam PF03170 Bacterial cellulose synthase subunit 64 559 1.9E-49 T 13-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 Atc_0428 bf81d9f27089055c4550cf32852a1b13 430 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 154 416 2.6E-98 T 13-10-2018 IPR019219 Protein of unknown function DUF2130 Atc_0428 bf81d9f27089055c4550cf32852a1b13 430 PIRSF PIRSF005850 1 430 2.3E-148 T 13-10-2018 IPR019219 Protein of unknown function DUF2130 Atc_0810 14c3628f0168b466bff63909f6b99740 532 Pfam PF07690 Major Facilitator Superfamily 31 421 6.3E-29 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_0810 14c3628f0168b466bff63909f6b99740 532 SUPERFAMILY SSF103473 17 513 2.88E-36 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_0810 14c3628f0168b466bff63909f6b99740 532 Gene3D G3DSA:1.20.1720.10 26 229 1.3E-24 T 13-10-2018 Atc_2835 90de433c512c3df3cbb6ba9a66c95fdd 260 Pfam PF02405 Permease MlaE 46 257 5.5E-76 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Atc_2835 90de433c512c3df3cbb6ba9a66c95fdd 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 9 259 1.0E-85 T 13-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Atc_0960 8289aa6b79eaab0196d6b8e570083593 249 Pfam PF04012 PspA/IM30 family 2 230 5.0E-22 T 13-10-2018 IPR007157 PspA/IM30 Atc_m206 4c99f69275b9ac8d62ca9b6736a7e0eb 126 Pfam PF05717 IS66 Orf2 like protein 10 107 4.8E-34 T 13-10-2018 IPR008878 Transposase IS66, Orf2 Atc_0246 c79d2c4af05627a2e4b0cfd7f99ec0b0 241 Pfam PF07027 Protein of unknown function (DUF1318) 145 241 2.0E-17 T 13-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 Atc_0040 9fa0d37b5231cc487a8eba786c350f19 398 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 3.2E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atc_0040 9fa0d37b5231cc487a8eba786c350f19 398 Pfam PF01610 Transposase 156 383 2.0E-71 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atc_0040 9fa0d37b5231cc487a8eba786c350f19 398 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 9.9E-16 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Atc_2587 02b129c614e591081609cdef5fdf6b6c 166 Pfam PF01475 Ferric uptake regulator family 12 131 5.1E-43 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Atc_2587 02b129c614e591081609cdef5fdf6b6c 166 Gene3D G3DSA:1.10.10.10 2 85 2.0E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_2587 02b129c614e591081609cdef5fdf6b6c 166 Gene3D G3DSA:3.30.1490.190 87 141 5.5E-21 T 13-10-2018 Atc_2587 02b129c614e591081609cdef5fdf6b6c 166 SUPERFAMILY SSF46785 7 134 2.08E-40 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0131 6d105aeff473711b1a83790a25aa59f7 281 Pfam PF05598 Transposase domain (DUF772) 52 127 3.1E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0131 6d105aeff473711b1a83790a25aa59f7 281 Pfam PF01609 Transposase DDE domain 144 274 3.9E-12 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_2692 8f5c732cb06c9508f4e830b26206964f 393 SUPERFAMILY SSF56601 38 286 1.79E-68 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atc_2692 8f5c732cb06c9508f4e830b26206964f 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 75 86 5.3E-18 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_2692 8f5c732cb06c9508f4e830b26206964f 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 155 168 5.3E-18 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_2692 8f5c732cb06c9508f4e830b26206964f 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 128 145 5.3E-18 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atc_2692 8f5c732cb06c9508f4e830b26206964f 393 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 50 268 1.1E-63 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Atc_2692 8f5c732cb06c9508f4e830b26206964f 393 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 291 373 8.8E-5 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atc_2692 8f5c732cb06c9508f4e830b26206964f 393 Gene3D G3DSA:3.40.710.10 20 308 3.7E-76 T 13-10-2018 Atc_1549 2189871c88369b9fba979a406de0f26c 97 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 5 91 1.3E-34 T 13-10-2018 IPR014057 Uncharacterized protein HI1420 Atc_1549 2189871c88369b9fba979a406de0f26c 97 Pfam PF01381 Helix-turn-helix 46 90 3.0E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atc_1549 2189871c88369b9fba979a406de0f26c 97 SUPERFAMILY SSF47413 26 90 9.29E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_1549 2189871c88369b9fba979a406de0f26c 97 SMART SM00530 39 92 4.3E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atc_1549 2189871c88369b9fba979a406de0f26c 97 Gene3D G3DSA:1.10.260.40 43 94 2.3E-6 T 13-10-2018 Atc_2800 01686f227893f7ab2f4b44662f7414f5 136 TIGRFAM TIGR02801 tolR: protein TolR 7 131 4.0E-41 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Atc_2800 01686f227893f7ab2f4b44662f7414f5 136 Gene3D G3DSA:3.30.420.270 55 129 2.2E-15 T 13-10-2018 Atc_2800 01686f227893f7ab2f4b44662f7414f5 136 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 1 132 25.811 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Atc_2800 01686f227893f7ab2f4b44662f7414f5 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 4 134 3.0E-26 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Atc_2470 0cce4aa8b9870b4f1729b3bb9b30facb 743 Pfam PF02517 CAAX protease self-immunity 641 734 2.1E-18 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Atc_2457 63a107ab0210f565b9054cfa998e3078 257 SUPERFAMILY SSF53335 84 191 1.66E-17 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_2457 63a107ab0210f565b9054cfa998e3078 257 Pfam PF08241 Methyltransferase domain 84 130 1.0E-9 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atc_2457 63a107ab0210f565b9054cfa998e3078 257 Gene3D G3DSA:3.40.50.150 67 187 3.6E-19 T 13-10-2018 Atc_2866 77e449d83073f64cf5e7ebc8326faee4 248 Pfam PF05818 Enterobacterial TraT complement resistance protein 38 247 4.0E-75 T 13-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 Atc_2866 77e449d83073f64cf5e7ebc8326faee4 248 PIRSF PIRSF002859 7 248 1.0E-59 T 13-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 Atc_2484 4ef95ca91b6e715d466760a4917cbbc7 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 4 159 35.17 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atc_2484 4ef95ca91b6e715d466760a4917cbbc7 160 Gene3D G3DSA:3.30.1330.50 1 160 9.1E-67 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atc_2484 4ef95ca91b6e715d466760a4917cbbc7 160 SUPERFAMILY SSF69765 4 158 1.31E-63 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atc_2484 4ef95ca91b6e715d466760a4917cbbc7 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 38 53 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atc_2484 4ef95ca91b6e715d466760a4917cbbc7 160 Pfam PF02542 YgbB family 5 157 5.1E-64 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atc_2484 4ef95ca91b6e715d466760a4917cbbc7 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 5 158 1.8E-63 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atc_2842 a2d6274ae738c2460525e836541a75de 184 Pfam PF14279 HNH endonuclease 90 144 2.5E-17 T 13-10-2018 IPR029471 HNH endonuclease 5 Atc_2842 a2d6274ae738c2460525e836541a75de 184 SMART SM00507 77 130 2.5E-8 T 13-10-2018 IPR003615 HNH nuclease Atc_2842 a2d6274ae738c2460525e836541a75de 184 Gene3D G3DSA:3.30.40.60 71 162 8.4E-24 T 13-10-2018 Atc_2289 0c235015c4765d3d5947df26fadd5fad 248 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 15 82 1.4E-10 T 13-10-2018 IPR018720 Domain of unknown function DUF2249 Atc_2289 0c235015c4765d3d5947df26fadd5fad 248 Pfam PF01814 Hemerythrin HHE cation binding domain 93 211 3.5E-9 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Atc_2289 0c235015c4765d3d5947df26fadd5fad 248 Gene3D G3DSA:1.20.120.520 82 231 1.7E-8 T 13-10-2018 Atc_0713 70af8ea6ec74836285f37eb1d3695ee3 179 Pfam PF00582 Universal stress protein family 5 155 8.9E-11 T 13-10-2018 IPR006016 UspA Atc_0713 70af8ea6ec74836285f37eb1d3695ee3 179 SUPERFAMILY SSF52402 6 157 1.17E-13 T 13-10-2018 Atc_0713 70af8ea6ec74836285f37eb1d3695ee3 179 Gene3D G3DSA:3.40.50.620 4 156 6.1E-15 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2315 30177297a6a384edbbc875da132eccef 173 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 10 141 2.9E-34 T 13-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Atc_2315 30177297a6a384edbbc875da132eccef 173 Pfam PF00583 Acetyltransferase (GNAT) family 40 120 8.1E-15 T 13-10-2018 IPR000182 GNAT domain Atc_2315 30177297a6a384edbbc875da132eccef 173 Gene3D G3DSA:3.40.630.30 2 152 1.7E-42 T 13-10-2018 Atc_2315 30177297a6a384edbbc875da132eccef 173 SUPERFAMILY SSF55729 1 146 5.66E-33 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atc_0743 9f986f237cdcf3d0e09c97993a026eae 118 SUPERFAMILY SSF46785 47 99 8.44E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0743 9f986f237cdcf3d0e09c97993a026eae 118 Gene3D G3DSA:1.10.10.10 16 102 3.7E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1934 87dc1b89efbd04f2572cb097a41284c8 176 Pfam PF01814 Hemerythrin HHE cation binding domain 14 149 7.8E-16 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Atc_1934 87dc1b89efbd04f2572cb097a41284c8 176 Gene3D G3DSA:1.20.120.520 1 171 1.9E-38 T 13-10-2018 Atc_1621 82491498d221c0fa5284c9eba4531157 233 Gene3D G3DSA:3.40.190.10 103 203 3.4E-36 T 13-10-2018 Atc_1621 82491498d221c0fa5284c9eba4531157 233 Gene3D G3DSA:3.40.190.10 28 211 3.4E-36 T 13-10-2018 Atc_1621 82491498d221c0fa5284c9eba4531157 233 SUPERFAMILY SSF53850 28 223 2.17E-30 T 13-10-2018 Atc_1621 82491498d221c0fa5284c9eba4531157 233 Pfam PF03466 LysR substrate binding domain 28 220 1.3E-36 T 13-10-2018 IPR005119 LysR, substrate-binding Atc_2239 57db9a208783cca4074b208e5c226e35 235 Gene3D G3DSA:3.40.50.1580 24 180 8.9E-21 T 13-10-2018 Atc_2239 57db9a208783cca4074b208e5c226e35 235 Pfam PF01048 Phosphorylase superfamily 30 173 6.1E-17 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Atc_2239 57db9a208783cca4074b208e5c226e35 235 SUPERFAMILY SSF53167 30 173 1.27E-22 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Atc_m172 f896b8e9cd6db1337341a231806b8ba0 587 Pfam PF13708 Domain of unknown function (DUF4942) 280 477 2.3E-48 T 13-10-2018 IPR031339 Domain of unknown function DUF4942 Atc_m172 f896b8e9cd6db1337341a231806b8ba0 587 Gene3D G3DSA:3.40.50.150 8 181 1.5E-8 T 13-10-2018 Atc_m172 f896b8e9cd6db1337341a231806b8ba0 587 SUPERFAMILY SSF53335 5 229 4.79E-10 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0820 5f031b8f486689c38d789a3368648625 99 Pfam PF03795 YCII-related domain 1 94 1.6E-25 T 13-10-2018 IPR005545 YCII-related Atc_0820 5f031b8f486689c38d789a3368648625 99 Gene3D G3DSA:3.30.70.1060 1 98 1.7E-33 T 13-10-2018 Atc_0820 5f031b8f486689c38d789a3368648625 99 SUPERFAMILY SSF54909 1 98 1.79E-28 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Atc_0947 4daa638a20ea8aff982a921193f7a654 411 SUPERFAMILY SSF54593 72 390 4.47E-8 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atc_1011 42fa09a2859760bebcbabd058e4260a4 132 Pfam PF02620 Uncharacterized ACR, COG1399 22 109 1.6E-11 T 13-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Atc_2381 d58562d3915e36dd2ab1b5260fdd92d5 358 SUPERFAMILY SSF141523 96 230 1.96E-23 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_2381 d58562d3915e36dd2ab1b5260fdd92d5 358 Pfam PF03734 L,D-transpeptidase catalytic domain 98 230 3.3E-15 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atc_2381 d58562d3915e36dd2ab1b5260fdd92d5 358 Gene3D G3DSA:2.40.440.10 23 304 1.1E-69 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_0891 5f14e9d2c11ed364e7a89c060cfe1f36 476 SUPERFAMILY SSF103473 10 456 9.16E-66 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_0891 5f14e9d2c11ed364e7a89c060cfe1f36 476 Gene3D G3DSA:1.20.1720.10 14 217 2.5E-49 T 13-10-2018 Atc_0891 5f14e9d2c11ed364e7a89c060cfe1f36 476 Pfam PF07690 Major Facilitator Superfamily 19 404 2.8E-47 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_0891 5f14e9d2c11ed364e7a89c060cfe1f36 476 Gene3D G3DSA:1.20.1250.20 254 457 2.7E-19 T 13-10-2018 Atc_0331 76e82bcc8d81fbdf6d7f90c5aca7682b 197 Gene3D G3DSA:2.40.160.20 18 180 1.1E-12 T 13-10-2018 Atc_0331 76e82bcc8d81fbdf6d7f90c5aca7682b 197 SUPERFAMILY SSF56925 24 183 1.62E-10 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Atc_0780 fd0184ef20e69879fb3ad589190c401f 80 Pfam PF05717 IS66 Orf2 like protein 9 52 7.3E-14 T 13-10-2018 IPR008878 Transposase IS66, Orf2 Atc_1051 57d46e9b78c7a86522d1d97547cc151d 114 Pfam PF06127 Protein of unknown function (DUF962) 9 101 8.3E-30 T 13-10-2018 IPR009305 Protein of unknown function DUF962 Atc_m015 b657c62c9ab2166bf6be80b49d88aa84 153 Pfam PF01609 Transposase DDE domain 5 145 3.6E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0277 15117c38a8049039ad09ade714e89a58 163 Pfam PF06146 Phosphate-starvation-inducible E 80 146 5.3E-16 T 13-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like Atc_0912 e4e0b0f9b762dd6c64629bba4ce9de22 128 Pfam PF01597 Glycine cleavage H-protein 8 125 5.6E-39 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Atc_0912 e4e0b0f9b762dd6c64629bba4ce9de22 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Atc_0912 e4e0b0f9b762dd6c64629bba4ce9de22 128 SUPERFAMILY SSF51230 4 126 7.59E-36 T 13-10-2018 IPR011053 Single hybrid motif Atc_0912 e4e0b0f9b762dd6c64629bba4ce9de22 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 35.944 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Atc_0912 e4e0b0f9b762dd6c64629bba4ce9de22 128 Gene3D G3DSA:2.40.50.100 2 128 8.7E-43 T 13-10-2018 Atc_0912 e4e0b0f9b762dd6c64629bba4ce9de22 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 126 8.2E-45 T 13-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Atc_0742 de1ff1a34589b94472f4eeece22faf96 965 SUPERFAMILY SSF56672 444 689 5.45E-19 T 13-10-2018 Atc_0742 de1ff1a34589b94472f4eeece22faf96 965 Pfam PF03175 DNA polymerase type B, organellar and viral 432 622 2.5E-7 T 13-10-2018 IPR004868 DNA-directed DNA polymerase, family B, mitochondria/virus GO:0000166|GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atc_1224 08d0194cefb09758114e002db307d39b 726 Pfam PF13307 Helicase C-terminal domain 538 649 3.1E-7 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Atc_1224 08d0194cefb09758114e002db307d39b 726 Gene3D G3DSA:3.40.50.300 43 284 2.2E-22 T 13-10-2018 Atc_1224 08d0194cefb09758114e002db307d39b 726 SMART SM00491 487 650 2.2E-4 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Atc_1224 08d0194cefb09758114e002db307d39b 726 SMART SM00487 13 294 0.0025 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atc_1224 08d0194cefb09758114e002db307d39b 726 Gene3D G3DSA:3.40.50.300 456 659 3.0E-11 T 13-10-2018 Atc_1224 08d0194cefb09758114e002db307d39b 726 SUPERFAMILY SSF52540 58 551 1.16E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_0946 3235504826d35cf2206317c86ef6fe43 171 Pfam PF08534 Redoxin 46 157 7.2E-13 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Atc_0946 3235504826d35cf2206317c86ef6fe43 171 SUPERFAMILY SSF52833 5 161 1.36E-25 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Atc_0946 3235504826d35cf2206317c86ef6fe43 171 Gene3D G3DSA:3.40.30.10 24 161 5.7E-25 T 13-10-2018 Atc_2398 f1bcdb1e17040e8d592b7b23e6e22830 186 Pfam PF02677 Uncharacterized BCR, COG1636 7 161 5.7E-54 T 13-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 Atc_2p06 9358ef14987a3b5e47fe75666fcabdd4 166 SUPERFAMILY SSF75169 52 166 7.53E-20 T 13-10-2018 IPR027396 DsrEFH-like Atc_2p06 9358ef14987a3b5e47fe75666fcabdd4 166 Gene3D G3DSA:3.40.1260.10 50 166 7.4E-29 T 13-10-2018 IPR027396 DsrEFH-like Atc_2p06 9358ef14987a3b5e47fe75666fcabdd4 166 Pfam PF02635 DsrE/DsrF-like family 53 166 3.2E-7 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Atc_1418 67f706b65e5ff9a2947d5367aee7086a 246 Pfam PF07238 PilZ domain 137 232 1.9E-7 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Atc_2786 cb900ba0672c2b3d8cab5556295d2610 394 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 11 146 8.3E-12 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal Atc_2786 cb900ba0672c2b3d8cab5556295d2610 394 SUPERFAMILY SSF160246 11 142 2.62E-15 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Atc_1721 3e49559e82ca500273b1288a81609af3 469 SUPERFAMILY SSF56672 26 226 3.56E-19 T 13-10-2018 Atc_2650 ee2e4f0b820718e615c8352cdaad462b 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 131 1.0E-34 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Atc_2650 ee2e4f0b820718e615c8352cdaad462b 152 Gene3D G3DSA:2.40.330.20 1 148 1.1E-42 T 13-10-2018 IPR038619 MraZ superfamily Atc_2650 ee2e4f0b820718e615c8352cdaad462b 152 Pfam PF02381 MraZ protein, putative antitoxin-like 83 137 5.7E-14 T 13-10-2018 IPR020603 MraZ domain Atc_2650 ee2e4f0b820718e615c8352cdaad462b 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 80 6.9E-13 T 13-10-2018 IPR020603 MraZ domain Atc_2650 ee2e4f0b820718e615c8352cdaad462b 152 SUPERFAMILY SSF89447 1 143 3.87E-43 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Atc_2650 ee2e4f0b820718e615c8352cdaad462b 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 52.255 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Atc_2650 ee2e4f0b820718e615c8352cdaad462b 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 136 5.8E-41 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Atc_0784 8494aa470ea993a93615e1825168644c 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 10 466 2.7E-118 T 13-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Atc_0784 8494aa470ea993a93615e1825168644c 466 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 1 466 3.0E-153 T 13-10-2018 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 Atc_0784 8494aa470ea993a93615e1825168644c 466 Pfam PF02397 Bacterial sugar transferase 269 460 5.0E-68 T 13-10-2018 IPR003362 Bacterial sugar transferase Atc_1072 112f9790c133bd50de5abdb808c4a93e 294 SUPERFAMILY SSF51658 81 273 5.97E-7 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily Atc_1072 112f9790c133bd50de5abdb808c4a93e 294 Pfam PF05114 Protein of unknown function (DUF692) 24 289 2.3E-99 T 13-10-2018 IPR007801 Uncharacterised protein family UPF0276 Atc_1072 112f9790c133bd50de5abdb808c4a93e 294 Gene3D G3DSA:3.20.20.150 21 293 1.3E-87 T 13-10-2018 Atc_2126 b45206ab53394b293c1a520b2abf8541 240 Pfam PF14460 Prokaryotic E2 family D 57 222 6.9E-50 T 13-10-2018 IPR032787 Prokaryotic E2 family D Atc_2126 b45206ab53394b293c1a520b2abf8541 240 TIGRFAM TIGR03737 PRTRC_B: PRTRC system protein B 13 227 2.9E-55 T 13-10-2018 IPR022280 ParB-related, ThiF-related cassette, protein B Atc_2358 e44531c98703422af0840be2fd5f7fa6 230 SUPERFAMILY SSF54862 1 202 6.8E-68 T 13-10-2018 Atc_2358 e44531c98703422af0840be2fd5f7fa6 230 Gene3D G3DSA:3.30.70.20 1 230 1.1E-67 T 13-10-2018 Atc_2358 e44531c98703422af0840be2fd5f7fa6 230 Pfam PF13247 4Fe-4S dicluster domain 67 166 1.1E-23 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atc_2358 e44531c98703422af0840be2fd5f7fa6 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 105 116 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atc_0425 64d5ca62f4ee1ce62d18c6bf30ba61f5 322 Pfam PF01609 Transposase DDE domain 145 310 5.0E-25 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0425 64d5ca62f4ee1ce62d18c6bf30ba61f5 322 Pfam PF05598 Transposase domain (DUF772) 54 129 3.1E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1221 abfbfd27e3a6b8af0965c12983eacf62 151 Pfam PF08798 CRISPR associated protein 35 147 3.6E-11 T 13-10-2018 IPR010179 CRISPR-associated protein Cse3 Atc_1221 abfbfd27e3a6b8af0965c12983eacf62 151 SMART SM01101 1 149 4.4E-4 T 13-10-2018 IPR010179 CRISPR-associated protein Cse3 Atc_1221 abfbfd27e3a6b8af0965c12983eacf62 151 SUPERFAMILY SSF117987 50 147 3.92E-11 T 13-10-2018 Atc_1221 abfbfd27e3a6b8af0965c12983eacf62 151 Gene3D G3DSA:3.30.70.1210 32 149 6.8E-8 T 13-10-2018 Atc_m192 90af113e00ff6ddbf4c81504dc42f07d 172 Pfam PF13701 Transposase DDE domain group 1 27 140 9.9E-12 T 13-10-2018 IPR025668 Transposase DDE domain Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 8.4E-6 T 13-10-2018 Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 8.4E-6 T 13-10-2018 Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.0E-36 T 13-10-2018 Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.0E-36 T 13-10-2018 Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.0E-36 T 13-10-2018 Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.0E-36 T 13-10-2018 Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.0E-36 T 13-10-2018 Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 PRINTS PR00097 Anthranilate synthase component II signature 164 177 2.0E-36 T 13-10-2018 Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 SUPERFAMILY SSF52317 1 186 1.76E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 Gene3D G3DSA:3.40.50.880 1 190 3.9E-63 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 Pfam PF00117 Glutamine amidotransferase class-I 4 185 2.9E-53 T 13-10-2018 IPR017926 Glutamine amidotransferase Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.2E-13 T 13-10-2018 Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 7.2E-13 T 13-10-2018 Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.2E-13 T 13-10-2018 Atc_0080 c87a4457b1b1fd6f361fbf02476ffc6d 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 8.3E-82 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atc_1192 9cf714313a39bdbdc88ab014280edc50 570 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 421 563 2.5E-30 T 13-10-2018 IPR018760 Protein of unknown function DUF2326 Atc_1665 610368a9796964b867dd60133c6bc34b 668 Pfam PF00361 Proton-conducting membrane transporter 135 421 2.6E-47 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1665 610368a9796964b867dd60133c6bc34b 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 2.9E-7 T 13-10-2018 Atc_1665 610368a9796964b867dd60133c6bc34b 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 2.9E-7 T 13-10-2018 Atc_1665 610368a9796964b867dd60133c6bc34b 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 223 244 2.9E-7 T 13-10-2018 Atc_0318 1fb2421b4c781ab80537e57a64f40439 187 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 174 1.1E-31 T 13-10-2018 IPR018639 Domain of unknown function DUF2062 Atc_2762 6fb9dc0b27dc6015cdaa99a39916d223 121 Pfam PF02021 Uncharacterised protein family UPF0102 12 102 1.7E-27 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 Atc_2762 6fb9dc0b27dc6015cdaa99a39916d223 121 Gene3D G3DSA:3.40.1350.10 11 121 1.9E-36 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Atc_2762 6fb9dc0b27dc6015cdaa99a39916d223 121 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 117 1.5E-31 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 Atc_2762 6fb9dc0b27dc6015cdaa99a39916d223 121 SUPERFAMILY SSF52980 7 115 3.49E-22 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Atc_2762 6fb9dc0b27dc6015cdaa99a39916d223 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 116 23.777 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 Atc_1089 93fbedc8a8b7a1e415621b8e6838c521 801 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 15 778 1.3E-244 T 13-10-2018 IPR018752 Uncharacterised protein family UPF0753 Atc_1089 93fbedc8a8b7a1e415621b8e6838c521 801 Hamap MF_01871 UPF0753 protein . 8 793 21.905 T 13-10-2018 IPR018752 Uncharacterised protein family UPF0753 Atc_1603 119ae827dd5795581abb76c583bc6841 488 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 11 446 4.9E-136 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_1603 119ae827dd5795581abb76c583bc6841 488 PIRSF PIRSF006446 4 467 5.3E-128 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_2208 3b0b688ebce2ff63b560bcee77c06cd0 516 Pfam PF05670 Domain of unknown function (DUF814) 409 492 2.8E-20 T 13-10-2018 IPR008532 Domain of unknown function DUF814 Atc_2208 3b0b688ebce2ff63b560bcee77c06cd0 516 Gene3D G3DSA:2.30.310.10 56 165 3.4E-8 T 13-10-2018 Atc_2538 14741ec0376ca9717d2f74b951c13c53 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 117 1.3E-39 T 13-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_2538 14741ec0376ca9717d2f74b951c13c53 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 20.801 T 13-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 Atc_2538 14741ec0376ca9717d2f74b951c13c53 118 Gene3D G3DSA:1.20.58.1610 1 118 2.6E-46 T 13-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1363 728215f4b65137d4d666a9a79923631f 203 Pfam PF04893 Yip1 domain 11 179 1.4E-17 T 13-10-2018 IPR006977 Yip1 domain GO:0016020 Atc_1321 d3cc5a2310415f482b71c1ebdf7823ab 71 Pfam PF04324 BFD-like [2Fe-2S] binding domain 16 61 1.1E-4 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Atc_m007 e1a0d5f68ad0207776d602cd2de5c822 332 Pfam PF06516 Purine nucleoside permease (NUP) 32 329 1.7E-41 T 13-10-2018 IPR009486 Purine nucleoside permease GO:0055085 Atc_m007 e1a0d5f68ad0207776d602cd2de5c822 332 Gene3D G3DSA:3.40.50.1580 33 330 4.2E-17 T 13-10-2018 Atc_m007 e1a0d5f68ad0207776d602cd2de5c822 332 SUPERFAMILY SSF53167 33 303 8.9E-9 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Atc_1341 14f9e14beb0dd504da4584d8282c5c62 249 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 6.9E-35 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Atc_1p08 f4f462e65665353628226f6f63c07957 227 SUPERFAMILY SSF52540 5 135 7.36E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1p08 f4f462e65665353628226f6f63c07957 227 Gene3D G3DSA:3.40.50.300 5 136 6.1E-9 T 13-10-2018 Atc_1p08 f4f462e65665353628226f6f63c07957 227 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 136 4.6E-7 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Atc_2588 0961c4ba11e48cbd6ed9c93a79d4ab82 113 Pfam PF04355 SmpA / OmlA family 31 98 4.1E-20 T 13-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 Atc_2588 0961c4ba11e48cbd6ed9c93a79d4ab82 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 9 111 20.644 T 13-10-2018 IPR026592 Outer membrane protein assembly factor BamE Atc_2588 0961c4ba11e48cbd6ed9c93a79d4ab82 113 Gene3D G3DSA:3.30.1450.10 30 110 5.8E-23 T 13-10-2018 IPR037873 BamE-like Atc_2191 e472dc41bf364c9ee0f8aac0bfbbf462 369 Pfam PF12698 ABC-2 family transporter protein 33 360 1.4E-37 T 13-10-2018 Atc_0663 8dc2d0992f28a2bf9675bd0132e73dfd 322 Pfam PF00348 Polyprenyl synthetase 33 266 1.2E-66 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Atc_0663 8dc2d0992f28a2bf9675bd0132e73dfd 322 SUPERFAMILY SSF48576 5 321 7.74E-89 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atc_0663 8dc2d0992f28a2bf9675bd0132e73dfd 322 Gene3D G3DSA:1.10.600.10 1 322 1.2E-101 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atc_2259 7918b1ffe81f0352da903f52e361018e 61 SUPERFAMILY SSF143011 2 60 1.83E-21 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atc_2259 7918b1ffe81f0352da903f52e361018e 61 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 1 61 6.4E-31 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Atc_2259 7918b1ffe81f0352da903f52e361018e 61 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 2 61 5.6E-29 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Atc_2259 7918b1ffe81f0352da903f52e361018e 61 Gene3D G3DSA:3.30.2310.20 1 61 4.0E-32 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atc_2629 ab87756974851d1626617f319cd64154 259 Pfam PF00156 Phosphoribosyl transferase domain 220 255 2.1E-7 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atc_2629 ab87756974851d1626617f319cd64154 259 Gene3D G3DSA:3.40.50.2020 145 258 1.1E-16 T 13-10-2018 Atc_2629 ab87756974851d1626617f319cd64154 259 SUPERFAMILY SSF53271 89 256 7.87E-30 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Atc_0990 b786fd652075c1c6b16a88795de96906 122 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 4 117 3.1E-48 T 13-10-2018 IPR018714 Protein of unknown function DUF2237 Atc_0990 b786fd652075c1c6b16a88795de96906 122 Gene3D G3DSA:3.30.56.110 1 122 1.8E-48 T 13-10-2018 Atc_2637 3f9817f69e5c65fb1fd8228a4a49b36a 323 Pfam PF13641 Glycosyltransferase like family 2 7 235 1.1E-23 T 13-10-2018 Atc_2637 3f9817f69e5c65fb1fd8228a4a49b36a 323 Gene3D G3DSA:3.90.550.10 7 235 3.8E-41 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_2637 3f9817f69e5c65fb1fd8228a4a49b36a 323 SUPERFAMILY SSF53448 9 255 1.74E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atc_0717 b94ee0c5e390f00ae7815166a5bf9e6d 480 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 11 447 5.8E-135 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_0717 b94ee0c5e390f00ae7815166a5bf9e6d 480 PIRSF PIRSF006446 5 464 6.0E-131 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atc_0789 4dbaf4ea8c7b1c5b71e3946a67a5f514 171 Gene3D G3DSA:1.25.40.10 22 153 6.7E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0789 4dbaf4ea8c7b1c5b71e3946a67a5f514 171 SUPERFAMILY SSF48452 68 154 7.59E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0154 a3cb0a486d0ab35980801f85a23901b9 351 Pfam PF05598 Transposase domain (DUF772) 53 127 3.3E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0154 a3cb0a486d0ab35980801f85a23901b9 351 Pfam PF01609 Transposase DDE domain 170 342 5.7E-14 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0967 f51b60965484d1551fdb7131657c114e 514 Pfam PF07690 Major Facilitator Superfamily 22 415 4.4E-61 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_0967 f51b60965484d1551fdb7131657c114e 514 Gene3D G3DSA:1.20.1250.20 270 507 6.6E-14 T 13-10-2018 Atc_0967 f51b60965484d1551fdb7131657c114e 514 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 499 1.0E-128 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Atc_0967 f51b60965484d1551fdb7131657c114e 514 SUPERFAMILY SSF103473 16 501 1.31E-63 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_0967 f51b60965484d1551fdb7131657c114e 514 Gene3D G3DSA:1.20.1720.10 18 226 1.2E-49 T 13-10-2018 Atc_2323 e1c4a74119d1c967a9c70129e4dbbc04 287 Gene3D G3DSA:3.60.110.10 1 286 1.1E-109 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_2323 e1c4a74119d1c967a9c70129e4dbbc04 287 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 3 279 9.6E-135 T 13-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 Atc_2323 e1c4a74119d1c967a9c70129e4dbbc04 287 SUPERFAMILY SSF56317 3 280 3.01E-85 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atc_2323 e1c4a74119d1c967a9c70129e4dbbc04 287 Pfam PF00795 Carbon-nitrogen hydrolase 4 263 7.6E-55 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atc_2037 29d87527b2d4394d2e223087cca11e76 202 SUPERFAMILY SSF54427 65 193 1.4E-11 T 13-10-2018 IPR032710 NTF2-like domain superfamily Atc_2037 29d87527b2d4394d2e223087cca11e76 202 Pfam PF04335 VirB8 protein 3 194 4.2E-24 T 13-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 Atc_2037 29d87527b2d4394d2e223087cca11e76 202 Gene3D G3DSA:3.10.450.230 72 198 1.2E-6 T 13-10-2018 Atc_0856 c0850d35804028d78fb9df6098780c15 377 Pfam PF02684 Lipid-A-disaccharide synthetase 5 338 1.8E-83 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Atc_0856 c0850d35804028d78fb9df6098780c15 377 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 358 9.2E-76 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Atc_0856 c0850d35804028d78fb9df6098780c15 377 SUPERFAMILY SSF53756 12 371 2.25E-29 T 13-10-2018 Atc_0709 8f8b4fdfc044067a351bfc7b07cd780b 439 Pfam PF02321 Outer membrane efflux protein 34 212 2.1E-14 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_0709 8f8b4fdfc044067a351bfc7b07cd780b 439 Pfam PF02321 Outer membrane efflux protein 246 423 1.2E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_0709 8f8b4fdfc044067a351bfc7b07cd780b 439 Gene3D G3DSA:1.20.1600.10 18 429 9.9E-61 T 13-10-2018 Atc_0709 8f8b4fdfc044067a351bfc7b07cd780b 439 SUPERFAMILY SSF56954 12 426 1.31E-60 T 13-10-2018 Atc_0362 0d6801d5861f95ba9eec36fa5f573edc 705 Pfam PF03968 OstA-like protein 38 151 1.8E-5 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Atc_0362 0d6801d5861f95ba9eec36fa5f573edc 705 Pfam PF04453 Organic solvent tolerance protein 263 625 2.6E-57 T 13-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 Atc_0362 0d6801d5861f95ba9eec36fa5f573edc 705 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 7 685 16.859 T 13-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 Atc_1961 2205da87356ebacf7f10e42835c31431 372 Pfam PF01594 AI-2E family transporter 14 341 4.6E-58 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like Atc_1580 d22027b6f791e4ce87ff0ff39d0c376a 430 Gene3D G3DSA:2.40.160.10 25 430 2.1E-20 T 13-10-2018 IPR023614 Porin domain superfamily Atc_1580 d22027b6f791e4ce87ff0ff39d0c376a 430 Pfam PF03573 outer membrane porin, OprD family 36 310 2.1E-7 T 13-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 Atc_0687 5db6b60ebd2df7441c0b76deec43a7ec 183 Pfam PF00583 Acetyltransferase (GNAT) family 43 145 6.4E-7 T 13-10-2018 IPR000182 GNAT domain Atc_0687 5db6b60ebd2df7441c0b76deec43a7ec 183 SUPERFAMILY SSF55729 1 160 1.12E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atc_0687 5db6b60ebd2df7441c0b76deec43a7ec 183 Gene3D G3DSA:3.40.630.30 2 160 5.1E-19 T 13-10-2018 Atc_1536 30cf27e0a1b0dc81566e770c47b9e335 151 Gene3D G3DSA:2.40.160.180 27 136 3.1E-10 T 13-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily Atc_0530 fe07d3a05b201627fa4a492d8524f6e6 429 Pfam PF04286 Protein of unknown function (DUF445) 47 423 6.6E-90 T 13-10-2018 IPR007383 Protein of unknown function DUF445 Atc_0530 fe07d3a05b201627fa4a492d8524f6e6 429 SUPERFAMILY SSF48371 122 373 1.78E-5 T 13-10-2018 IPR016024 Armadillo-type fold Atc_0846 f98f8324ecfd0fb6c6b2795bb7a44fc2 265 Pfam PF01148 Cytidylyltransferase family 3 256 3.8E-49 T 13-10-2018 Atc_0846 f98f8324ecfd0fb6c6b2795bb7a44fc2 265 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 219 245 - T 13-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Atc_2581 b166676b2fc144215a42fbdc5d48d92a 197 Gene3D G3DSA:1.20.1740.10 21 189 8.6E-9 T 13-10-2018 Atc_0908 e5175a1d4029cbefffde8865b6277abb 156 Pfam PF02391 MoaE protein 5 116 6.5E-34 T 13-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Atc_0908 e5175a1d4029cbefffde8865b6277abb 156 Gene3D G3DSA:3.90.1170.40 1 139 7.8E-44 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Atc_0908 e5175a1d4029cbefffde8865b6277abb 156 SUPERFAMILY SSF54690 3 137 2.35E-46 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Atc_2373 7050c8e7648e822e1ae3630f2e969c6e 157 Pfam PF04093 rod shape-determining protein MreD 2 147 5.1E-11 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Atc_2373 7050c8e7648e822e1ae3630f2e969c6e 157 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 3 147 3.6E-21 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Atc_m061 2185a5397b29a0818f20944fdafda68f 172 Pfam PF13358 DDE superfamily endonuclease 2 137 1.2E-20 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Atc_m061 2185a5397b29a0818f20944fdafda68f 172 Gene3D G3DSA:3.30.420.470 1 161 1.3E-9 T 13-10-2018 Atc_2683 73383cf3edb2fbcbc36b4e13bfbf9472 130 Pfam PF13488 Glycine zipper 36 76 2.0E-9 T 13-10-2018 IPR039567 Glycine zipper domain Atc_2357 fceff1cbcfec6cb8306e600910d0f9cb 312 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 296 5.5E-34 T 13-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 Atc_0094 2f53ad796b24559b261065eea2fcd13d 212 Pfam PF13835 Domain of unknown function (DUF4194) 17 186 4.8E-46 T 13-10-2018 IPR025449 Protein of unknown function DUF4194 Atc_m187 e60626ceded06258b2475528366f3827 251 Pfam PF01618 MotA/TolQ/ExbB proton channel family 75 198 1.1E-26 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atc_m026 1160275bd5807d11639535995ad5b957 51 Pfam PF13318 Protein of unknown function (DUF4089) 1 49 6.5E-13 T 13-10-2018 IPR025148 Protein of unknown function DUF4089 Atc_m066 d09c682a04914f7d41e451d1f7dc43fd 60 SUPERFAMILY SSF46785 2 48 1.08E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_m066 d09c682a04914f7d41e451d1f7dc43fd 60 Gene3D G3DSA:1.10.10.10 1 56 1.7E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atc_1293 2768f9d5c131ecf5acc3e4361737d560 67 Pfam PF06945 Protein of unknown function (DUF1289) 8 51 1.4E-14 T 13-10-2018 IPR010710 Protein of unknown function DUF1289 Atc_m054 31614411e115f65d4fb292adf4dc0668 277 SUPERFAMILY SSF52309 181 242 3.66E-5 T 13-10-2018 Atc_m054 31614411e115f65d4fb292adf4dc0668 277 Gene3D G3DSA:3.40.50.450 163 262 7.1E-7 T 13-10-2018 Atc_m093 2526c932c673bf5d996adc12ac1ab6cb 559 Pfam PF02470 MlaD protein 48 138 8.1E-11 T 13-10-2018 IPR003399 Mce/MlaD Atc_m186 20a8cab26ccbe961444eaab5908aafe2 95 Pfam PF03843 Outer membrane lipoprotein Slp family 3 83 2.4E-21 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Atc_2021 e8a679862b32e4c2d9bc657cdbd6e5ec 210 Pfam PF14348 Domain of unknown function (DUF4400) 43 201 2.7E-17 T 13-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type Atc_2717 907fd4ea6e7354827aabfcd96829d766 407 Gene3D G3DSA:1.20.1250.20 219 400 1.3E-12 T 13-10-2018 Atc_2717 907fd4ea6e7354827aabfcd96829d766 407 Gene3D G3DSA:1.20.1250.20 8 201 1.4E-14 T 13-10-2018 Atc_2717 907fd4ea6e7354827aabfcd96829d766 407 SUPERFAMILY SSF103473 18 402 5.49E-38 T 13-10-2018 IPR036259 MFS transporter superfamily Atc_2717 907fd4ea6e7354827aabfcd96829d766 407 Pfam PF07690 Major Facilitator Superfamily 21 221 2.8E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_2717 907fd4ea6e7354827aabfcd96829d766 407 Pfam PF07690 Major Facilitator Superfamily 229 398 1.4E-9 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atc_1924 0cf6e18d7a6f1cde93d2b4385af5dac0 152 Pfam PF01814 Hemerythrin HHE cation binding domain 5 129 6.5E-16 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Atc_1924 0cf6e18d7a6f1cde93d2b4385af5dac0 152 Gene3D G3DSA:1.20.120.520 1 144 5.0E-13 T 13-10-2018 Atc_1645 40e165f1f3dce7e86c89e7c09b186c39 369 Pfam PF00487 Fatty acid desaturase 59 313 1.0E-25 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 Atc_0773 e5ede356d12881231549ed29c1b0af70 351 Pfam PF05598 Transposase domain (DUF772) 53 127 2.1E-21 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0773 e5ede356d12881231549ed29c1b0af70 351 Pfam PF01609 Transposase DDE domain 197 342 6.1E-14 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1986 489f4644222cd29fe70a0a9893acfd7c 280 Pfam PF13362 Toprim domain 191 278 2.2E-11 T 13-10-2018 IPR006171 TOPRIM domain Atc_0271 c02c6aeedaa07dc30b35bbeafddc6783 431 Pfam PF08886 Glutamate-cysteine ligase 23 421 8.6E-180 T 13-10-2018 IPR011718 Glutamate--cysteine ligase GshA Atc_0271 c02c6aeedaa07dc30b35bbeafddc6783 431 SUPERFAMILY SSF56059 280 338 7.29E-5 T 13-10-2018 Atc_0271 c02c6aeedaa07dc30b35bbeafddc6783 431 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 23 425 1.9E-188 T 13-10-2018 IPR011718 Glutamate--cysteine ligase GshA Atc_0271 c02c6aeedaa07dc30b35bbeafddc6783 431 Gene3D G3DSA:3.40.50.11280 71 206 2.6E-41 T 13-10-2018 Atc_m220 36844d1339634d071dc53cb8a39d00af 437 Pfam PF00872 Transposase, Mutator family 35 401 7.2E-66 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Atc_m244 326c81c3dc1099b9ef85f4f924c37b59 188 SUPERFAMILY SSF53335 17 170 1.48E-10 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_m244 326c81c3dc1099b9ef85f4f924c37b59 188 Gene3D G3DSA:3.40.50.150 24 183 1.0E-7 T 13-10-2018 Atc_0411 56790d24f6c2824fb15e81ca13056f9b 181 Pfam PF05656 Protein of unknown function (DUF805) 15 162 4.5E-23 T 13-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 Atc_1619 f7c2bccb75149d275ff57dca6f7c78b1 520 Pfam PF03050 Transposase IS66 family 175 455 8.1E-87 T 13-10-2018 IPR004291 Transposase, IS66 Atc_1619 f7c2bccb75149d275ff57dca6f7c78b1 520 Pfam PF13007 Transposase C of IS166 homeodomain 32 92 4.2E-11 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain Atc_1619 f7c2bccb75149d275ff57dca6f7c78b1 520 Pfam PF13817 IS66 C-terminal element 462 498 1.8E-11 T 13-10-2018 IPR039552 Transposase IS66, C-terminal Atc_1885 265c8a7c7c3cff6337fb7fbc0631f371 431 Gene3D G3DSA:1.20.1600.10 36 426 3.4E-52 T 13-10-2018 Atc_1885 265c8a7c7c3cff6337fb7fbc0631f371 431 SUPERFAMILY SSF56954 18 423 3.14E-57 T 13-10-2018 Atc_1885 265c8a7c7c3cff6337fb7fbc0631f371 431 Pfam PF02321 Outer membrane efflux protein 50 224 1.0E-14 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_1885 265c8a7c7c3cff6337fb7fbc0631f371 431 Pfam PF02321 Outer membrane efflux protein 255 423 1.6E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atc_m218 6fba1f2f3b94c7f2267f20dc94106a4d 421 Pfam PF00665 Integrase core domain 47 176 2.1E-15 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_2845 19470324146651dc5543e2a26b66f434 271 SUPERFAMILY SSF110997 180 249 2.62E-9 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Atc_2845 19470324146651dc5543e2a26b66f434 271 Pfam PF05036 Sporulation related domain 178 248 1.4E-6 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Atc_m158 cc6590d820e04c143f26b414eead5db0 307 Pfam PF00589 Phage integrase family 124 297 3.9E-31 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atc_m158 cc6590d820e04c143f26b414eead5db0 307 SUPERFAMILY SSF56349 18 298 1.82E-47 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atc_m158 cc6590d820e04c143f26b414eead5db0 307 Gene3D G3DSA:1.10.443.10 123 301 8.1E-42 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atc_m158 cc6590d820e04c143f26b414eead5db0 307 Gene3D G3DSA:1.10.150.130 19 101 1.2E-10 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_m158 cc6590d820e04c143f26b414eead5db0 307 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 92 2.7E-8 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Atc_1405 e186d84735c652908d874108c27099f0 516 Pfam PF13624 SurA N-terminal domain 1 165 1.4E-49 T 13-10-2018 Atc_1405 e186d84735c652908d874108c27099f0 516 SUPERFAMILY SSF109998 42 242 5.1E-29 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Atc_1405 e186d84735c652908d874108c27099f0 516 Pfam PF13145 PPIC-type PPIASE domain 208 366 2.0E-6 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Atc_1847 1de3691d15de0b32d6ed3002a61beea7 63 Pfam PF13751 Transposase DDE domain 12 58 1.5E-9 T 13-10-2018 IPR025668 Transposase DDE domain Atc_1542 ea7e7f8f6b2650d21ae991479c4c83e7 305 SUPERFAMILY SSF143865 18 231 1.1E-13 T 13-10-2018 Atc_1542 ea7e7f8f6b2650d21ae991479c4c83e7 305 Pfam PF01544 CorA-like Mg2+ transporter protein 19 298 1.9E-22 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Atc_1542 ea7e7f8f6b2650d21ae991479c4c83e7 305 Gene3D G3DSA:1.20.58.340 120 243 3.8E-9 T 13-10-2018 Atc_1022 c308d9628cc82ddb79d4a15b8f560b81 336 SUPERFAMILY SSF52540 52 203 2.06E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_1022 c308d9628cc82ddb79d4a15b8f560b81 336 Pfam PF13177 DNA polymerase III, delta subunit 16 165 5.8E-28 T 13-10-2018 Atc_1022 c308d9628cc82ddb79d4a15b8f560b81 336 Gene3D G3DSA:3.40.50.300 9 169 2.5E-34 T 13-10-2018 Atc_2074 121f8d7ca11735c29941cd0965c5ccc1 408 Pfam PF02371 Transposase IS116/IS110/IS902 family 255 339 1.4E-24 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Atc_2074 121f8d7ca11735c29941cd0965c5ccc1 408 Pfam PF01548 Transposase 11 157 1.8E-31 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Atc_0399 a02445904f09f4fd57244936033eeac9 297 Gene3D G3DSA:2.60.200.30 129 265 6.1E-82 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Atc_0399 a02445904f09f4fd57244936033eeac9 297 SUPERFAMILY SSF111331 7 289 2.09E-81 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Atc_0399 a02445904f09f4fd57244936033eeac9 297 Pfam PF01513 ATP-NAD kinase 66 272 1.7E-53 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Atc_0399 a02445904f09f4fd57244936033eeac9 297 Hamap MF_00361 NAD kinase [nadK]. 6 288 30.659 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Atc_0399 a02445904f09f4fd57244936033eeac9 297 Gene3D G3DSA:3.40.50.10330 25 288 6.1E-82 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Atc_2621 7fd3f27fc552c00d24f98ddfdf6f0592 258 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 18 237 2.0E-57 T 13-10-2018 IPR005226 UPF0014 family Atc_2621 7fd3f27fc552c00d24f98ddfdf6f0592 258 Pfam PF03649 Uncharacterised protein family (UPF0014) 13 243 1.2E-63 T 13-10-2018 IPR005226 UPF0014 family Atc_2228 715eb5d21885d3ccecd29a34844e0d1f 97 SUPERFAMILY SSF141000 4 95 2.88E-24 T 13-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Atc_2228 715eb5d21885d3ccecd29a34844e0d1f 97 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 92 1.0E-18 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Atc_2228 715eb5d21885d3ccecd29a34844e0d1f 97 Gene3D G3DSA:1.10.20.60 1 95 1.8E-23 T 13-10-2018 Atc_2228 715eb5d21885d3ccecd29a34844e0d1f 97 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 5 97 8.5E-27 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Atc_2228 715eb5d21885d3ccecd29a34844e0d1f 97 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 97 21.996 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Atc_1167 40dcef72a54e1b9d85e9fce83b632bea 172 SUPERFAMILY SSF53955 22 162 3.75E-44 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_1167 40dcef72a54e1b9d85e9fce83b632bea 172 Pfam PF01464 Transglycosylase SLT domain 44 136 2.5E-24 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Atc_1167 40dcef72a54e1b9d85e9fce83b632bea 172 Gene3D G3DSA:1.10.530.10 33 171 1.4E-41 T 13-10-2018 Atc_2282 3fed3d1db70e8c8b2a6052a160f90dbd 377 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 367 1.5E-116 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atc_2282 3fed3d1db70e8c8b2a6052a160f90dbd 377 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 3.6E-93 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atc_2282 3fed3d1db70e8c8b2a6052a160f90dbd 377 PIRSF PIRSF000267 3 377 8.0E-102 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atc_0301 8e6ef392dd045a83d4914064d16de5a2 149 SMART SM00450 26 132 9.8E-9 T 13-10-2018 IPR001763 Rhodanese-like domain Atc_0301 8e6ef392dd045a83d4914064d16de5a2 149 Gene3D G3DSA:3.40.250.10 19 149 5.2E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Atc_0301 8e6ef392dd045a83d4914064d16de5a2 149 SUPERFAMILY SSF52821 11 147 1.06E-21 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Atc_0301 8e6ef392dd045a83d4914064d16de5a2 149 Pfam PF00581 Rhodanese-like domain 26 124 1.1E-9 T 13-10-2018 IPR001763 Rhodanese-like domain Atc_0821 7587a7751d598e11365c371ad039936f 184 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 177 18.531 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Atc_0821 7587a7751d598e11365c371ad039936f 184 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 1.1E-53 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Atc_0821 7587a7751d598e11365c371ad039936f 184 Pfam PF04279 Intracellular septation protein A 1 175 5.6E-60 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Atc_0325 7cbf45bf3e4904174deec826dc9b2e09 61 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 56 23.83 T 13-10-2018 IPR038053 Uncharacterised protein family UPF0434 Atc_0325 7cbf45bf3e4904174deec826dc9b2e09 61 SUPERFAMILY SSF158997 1 56 4.32E-19 T 13-10-2018 Atc_0325 7cbf45bf3e4904174deec826dc9b2e09 61 Pfam PF03966 Trm112p-like protein 4 42 5.2E-6 T 13-10-2018 IPR005651 Trm112-like Atc_0325 7cbf45bf3e4904174deec826dc9b2e09 61 Gene3D G3DSA:2.20.25.10 10 59 5.9E-17 T 13-10-2018 Atc_1958 33ddca4eadc9d50f07311ccab3e2e85b 343 Pfam PF01594 AI-2E family transporter 13 331 2.0E-26 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like Atc_2184 f6c8e410435ac0e6145f3174486880ba 143 Gene3D G3DSA:3.10.450.50 21 140 2.3E-10 T 13-10-2018 Atc_2715 d46e9d6b6de683807fcce245c6dc02eb 619 Pfam PF05140 ResB-like family 25 591 5.9E-135 T 13-10-2018 IPR007816 ResB-like domain Atc_0864 3f1d5cfe5636725b78614d03602f268e 185 SUPERFAMILY SSF103515 7 185 8.37E-8 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Atc_1823 3a6676e6228d930c5ee1000623879b77 110 Pfam PF06155 Protein of unknown function (DUF971) 23 101 1.4E-30 T 13-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 Atc_1823 3a6676e6228d930c5ee1000623879b77 110 Gene3D G3DSA:3.30.2020.30 6 105 4.4E-39 T 13-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 Atc_2617 b8dd90c522dd53f0f0c88e540d82275f 100 Pfam PF12674 Putative zinc ribbon domain 20 98 8.0E-23 T 13-10-2018 IPR025868 Putative zinc ribbon domain Atc_1713 0ce63e23a79f5bda1f84ca8533af7d4b 274 Gene3D G3DSA:1.10.620.20 35 224 6.0E-16 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Atc_1713 0ce63e23a79f5bda1f84ca8533af7d4b 274 SUPERFAMILY SSF47240 3 251 1.42E-30 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_m032 23fb35534498ff97a0e2873d4fc3829b 154 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 77 88 1.8E-8 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Atc_m032 23fb35534498ff97a0e2873d4fc3829b 154 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 66 76 1.8E-8 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Atc_m032 23fb35534498ff97a0e2873d4fc3829b 154 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 105 117 1.8E-8 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Atc_m032 23fb35534498ff97a0e2873d4fc3829b 154 SUPERFAMILY SSF51306 28 150 4.36E-26 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Atc_m032 23fb35534498ff97a0e2873d4fc3829b 154 Gene3D G3DSA:2.10.109.10 39 153 2.6E-28 T 13-10-2018 Atc_m032 23fb35534498ff97a0e2873d4fc3829b 154 Pfam PF00717 Peptidase S24-like 69 133 2.3E-12 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Atc_0886 146b14b7a05e09c477e6d4eebb541a97 303 Pfam PF00950 ABC 3 transport family 18 263 3.4E-31 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Atc_0886 146b14b7a05e09c477e6d4eebb541a97 303 SUPERFAMILY SSF81345 12 273 3.4E-20 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Atc_2347 a55e30b7478867ca5b2856aeb81cc89a 303 Pfam PF02754 Cysteine-rich domain 152 246 1.8E-10 T 13-10-2018 IPR004017 Cysteine-rich domain Atc_2347 a55e30b7478867ca5b2856aeb81cc89a 303 Pfam PF02754 Cysteine-rich domain 4 87 8.9E-15 T 13-10-2018 IPR004017 Cysteine-rich domain Atc_2028 ca49384a32628382145a620c76106b02 110 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 13 81 1.5E-7 T 13-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB Atc_2734 afc8bd4039d12a4276e4634df096f39c 241 Pfam PF16754 Bacterial toxin homologue of phage lysozyme, C-term 39 190 3.6E-12 T 13-10-2018 IPR031922 Bacterial toxin homologue of phage lysozyme, C-terminal Atc_2734 afc8bd4039d12a4276e4634df096f39c 241 Gene3D G3DSA:1.10.530.40 22 234 2.3E-23 T 13-10-2018 Atc_1940 3a2b018551cdcfdb93994b83c119ae15 153 Pfam PF04343 Protein of unknown function, DUF488 30 134 9.3E-26 T 13-10-2018 IPR007438 Protein of unknown function DUF488 Atc_1438 d75de4354406b10b93a8c701df0eaf74 289 Pfam PF07849 Protein of unknown function (DUF1641) 248 270 1.7E-5 T 13-10-2018 IPR012440 Protein of unknown function DUF1641 Atc_1351 46715d27ccdf006f062a788259133228 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 89 192 3.9E-27 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atc_1623 43edd87e22f4c991409b831d1c4fda92 278 Pfam PF00665 Integrase core domain 172 276 4.5E-26 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atc_1623 43edd87e22f4c991409b831d1c4fda92 278 SUPERFAMILY SSF53098 171 276 2.28E-33 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Atc_1623 43edd87e22f4c991409b831d1c4fda92 278 Gene3D G3DSA:3.30.420.10 161 274 6.3E-16 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atc_1623 43edd87e22f4c991409b831d1c4fda92 278 Pfam PF13276 HTH-like domain 97 146 1.4E-15 T 13-10-2018 IPR025948 HTH-like domain Atc_1287 ef411519a5d41b52c5e6ee484e06048e 95 Gene3D G3DSA:1.10.260.40 4 61 9.8E-6 T 13-10-2018 Atc_1287 ef411519a5d41b52c5e6ee484e06048e 95 SUPERFAMILY SSF47413 6 81 1.32E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_1287 ef411519a5d41b52c5e6ee484e06048e 95 SMART SM00530 12 65 0.0049 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atc_1287 ef411519a5d41b52c5e6ee484e06048e 95 Pfam PF05269 Bacteriophage CII protein 8 40 1.9E-6 T 13-10-2018 IPR007933 Transcription activator CII GO:0003677|GO:0006355 Atc_2499 6e4b403256ff42eb51be03cba6784e34 180 Pfam PF03350 Uncharacterized protein family, UPF0114 10 137 2.4E-31 T 13-10-2018 IPR005134 Uncharacterised protein family UPF0114 Atc_2499 6e4b403256ff42eb51be03cba6784e34 180 PIRSF PIRSF026509 1 180 4.4E-38 T 13-10-2018 IPR005134 Uncharacterised protein family UPF0114 Atc_1243 4702d352a33f3347e30737c11bdd21e0 221 SUPERFAMILY SSF51306 37 205 3.24E-8 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Atc_1243 4702d352a33f3347e30737c11bdd21e0 221 Pfam PF10502 Signal peptidase, peptidase S26 36 205 4.2E-13 T 13-10-2018 IPR019533 Peptidase S26 Atc_0636 276ef00b3fff36886b8002423378c48d 77 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 4 74 1.0E-16 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Atc_0636 276ef00b3fff36886b8002423378c48d 77 Gene3D G3DSA:1.10.150.130 1 76 2.5E-24 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Atc_0799 6a2058517e1fdeef1a3e906199213432 131 SUPERFAMILY SSF55718 1 131 7.65E-19 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Atc_0799 6a2058517e1fdeef1a3e906199213432 131 Gene3D G3DSA:3.30.1050.10 2 131 3.1E-7 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Atc_0704 09ea90fd1883cff045eada170bda970c 217 SUPERFAMILY SSF53335 2 210 4.38E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atc_0704 09ea90fd1883cff045eada170bda970c 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 8 197 3.5E-42 T 13-10-2018 Atc_0704 09ea90fd1883cff045eada170bda970c 217 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Atc_0704 09ea90fd1883cff045eada170bda970c 217 Gene3D G3DSA:3.40.50.150 1 209 4.8E-51 T 13-10-2018 Atc_3p27 9a652e7a790cde79efcda8fa89eaa2f0 437 Pfam PF16793 RepB DNA-primase from phage plasmid 57 183 6.9E-8 T 13-10-2018 IPR039459 RepB-like DNA primase domain Atc_2638 45189a4a8209a4eb7e193481213061ef 399 Pfam PF04932 O-Antigen ligase 182 334 4.6E-14 T 13-10-2018 IPR007016 O-antigen ligase-related Atc_m020 36bdb1e1b0d870506dcc0d221b5cc538 748 SUPERFAMILY SSF56003 130 743 1.11E-164 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Atc_m020 36bdb1e1b0d870506dcc0d221b5cc538 748 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 21 120 3.2E-8 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Atc_m020 36bdb1e1b0d870506dcc0d221b5cc538 748 Gene3D G3DSA:3.30.365.10 3 745 1.2E-195 T 13-10-2018 Atc_m020 36bdb1e1b0d870506dcc0d221b5cc538 748 SUPERFAMILY SSF54665 8 120 1.96E-17 T 13-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Atc_m020 36bdb1e1b0d870506dcc0d221b5cc538 748 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 142 682 2.1E-146 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Atc_m020 36bdb1e1b0d870506dcc0d221b5cc538 748 SMART SM01008 20 123 6.1E-6 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Atc_0233 8ece8908a3a2cc1fb214e970960d553a 128 Pfam PF13767 Domain of unknown function (DUF4168) 46 123 5.2E-14 T 13-10-2018 IPR025433 Domain of unknown function DUF4168 Atc_2428 dc761648a64b198e26d2b5b4e99fb638 211 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 200 5.6E-40 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal Atc_2428 dc761648a64b198e26d2b5b4e99fb638 211 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 210 82.888 T 13-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Atc_2428 dc761648a64b198e26d2b5b4e99fb638 211 Gene3D G3DSA:3.40.225.10 7 210 4.4E-51 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Atc_2428 dc761648a64b198e26d2b5b4e99fb638 211 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 15 206 3.9E-59 T 13-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Atc_2428 dc761648a64b198e26d2b5b4e99fb638 211 SUPERFAMILY SSF53639 8 207 2.16E-44 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Atc_2428 dc761648a64b198e26d2b5b4e99fb638 211 SMART SM01007 12 202 3.3E-45 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal Atc_2213 f8d526e447bbc17ba13fb2234a77564d 607 Pfam PF05140 ResB-like family 19 586 4.3E-117 T 13-10-2018 IPR007816 ResB-like domain Atc_2249 045c397aa58895f8fa536027ee6a4d97 380 Pfam PF02405 Permease MlaE 164 370 2.6E-65 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Atc_2249 045c397aa58895f8fa536027ee6a4d97 380 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 135 374 4.9E-66 T 13-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Atc_m043 49e58e95bebf6e46ab5cb88191fb71f7 176 Pfam PF01478 Type IV leader peptidase family 28 140 2.0E-20 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Atc_m043 49e58e95bebf6e46ab5cb88191fb71f7 176 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 109 120 1.4E-10 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Atc_m043 49e58e95bebf6e46ab5cb88191fb71f7 176 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 98 108 1.4E-10 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Atc_m043 49e58e95bebf6e46ab5cb88191fb71f7 176 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 35 52 1.4E-10 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Atc_2083 489bfb457ef384e318ae253b19801bae 183 Gene3D G3DSA:3.40.1350.80 15 177 6.7E-40 T 13-10-2018 Atc_2083 489bfb457ef384e318ae253b19801bae 183 Pfam PF06616 BsuBI/PstI restriction endonuclease C-terminus 4 175 1.3E-36 T 13-10-2018 IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal GO:0000287|GO:0003677|GO:0009036|GO:0009307 Atc_0488 cd570cdde3e2dde96efc4ff73feb3cc1 911 SUPERFAMILY SSF48452 578 706 5.31E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atc_0488 cd570cdde3e2dde96efc4ff73feb3cc1 911 Pfam PF07238 PilZ domain 136 216 9.8E-5 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Atc_0488 cd570cdde3e2dde96efc4ff73feb3cc1 911 SMART SM00028 679 712 450.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0488 cd570cdde3e2dde96efc4ff73feb3cc1 911 SMART SM00028 531 564 480.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0488 cd570cdde3e2dde96efc4ff73feb3cc1 911 SMART SM00028 880 911 300.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0488 cd570cdde3e2dde96efc4ff73feb3cc1 911 SMART SM00028 581 614 42.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_0488 cd570cdde3e2dde96efc4ff73feb3cc1 911 SMART SM00028 830 863 9.2 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atc_1382 42a853efbd088fed710f5de527334c52 306 SUPERFAMILY SSF161098 30 293 1.12E-32 T 13-10-2018 IPR035906 MetI-like superfamily Atc_1382 42a853efbd088fed710f5de527334c52 306 Gene3D G3DSA:1.10.3720.10 80 301 1.2E-28 T 13-10-2018 IPR035906 MetI-like superfamily Atc_1382 42a853efbd088fed710f5de527334c52 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 294 1.7E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atc_1382 42a853efbd088fed710f5de527334c52 306 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 37 294 2.4E-62 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Atc_0730 8d3c06acf2eea1fe5c5aa6330566f599 230 Pfam PF04399 Glutaredoxin 2, C terminal domain 93 215 1.6E-8 T 13-10-2018 IPR007494 Glutaredoxin 2, C-terminal Atc_1052 74297383f10ee2d81019edf697b8ede4 351 Pfam PF05598 Transposase domain (DUF772) 53 126 9.2E-23 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1052 74297383f10ee2d81019edf697b8ede4 351 Pfam PF01609 Transposase DDE domain 170 342 3.1E-13 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1030 08251667e0b018a4a629b4803858a77d 190 Pfam PF04352 ProQ/FINO family 29 143 6.7E-25 T 13-10-2018 IPR016103 ProQ/FinO domain Atc_1030 08251667e0b018a4a629b4803858a77d 190 Gene3D G3DSA:1.10.1710.10 27 128 9.0E-6 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily Atc_1030 08251667e0b018a4a629b4803858a77d 190 SUPERFAMILY SSF48657 31 132 5.75E-8 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily Atc_1666 defa17614ea761e511e775b7f93aca2c 315 Pfam PF00146 NADH dehydrogenase 11 302 1.2E-33 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1166 8bac0d3c9e4ad6d69e11dfe5732c4c93 263 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 180 256 9.5E-24 T 13-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal Atc_2292 3ff883d4ddc33529859fedd8949e1a66 255 Pfam PF01171 PP-loop family 35 198 1.4E-14 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Atc_2292 3ff883d4ddc33529859fedd8949e1a66 255 Gene3D G3DSA:3.40.50.620 10 249 3.2E-45 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atc_2292 3ff883d4ddc33529859fedd8949e1a66 255 SUPERFAMILY SSF52402 13 223 2.21E-45 T 13-10-2018 Atc_2292 3ff883d4ddc33529859fedd8949e1a66 255 PIRSF PIRSF004976 6 248 5.9E-53 T 13-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Atc_m112 efa4a98a3a7fe0b5124662b80d150f01 318 Gene3D G3DSA:3.90.1570.30 3 151 7.6E-8 T 13-10-2018 Atc_m112 efa4a98a3a7fe0b5124662b80d150f01 318 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 17 130 1.6E-9 T 13-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain Atc_0044 822f2d06f24ba6704e22543d8fb3434b 505 SUPERFAMILY SSF56935 199 451 8.55E-5 T 13-10-2018 Atc_0945 ca424318de1ff04f69c73509fe8937d6 192 Pfam PF00293 NUDIX domain 53 166 1.2E-11 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atc_0945 ca424318de1ff04f69c73509fe8937d6 192 SUPERFAMILY SSF55811 34 176 2.03E-20 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atc_0945 ca424318de1ff04f69c73509fe8937d6 192 Gene3D G3DSA:3.90.79.10 4 187 3.9E-39 T 13-10-2018 Atc_2201 ca593d27b4894103dbee04b5f86d66e4 385 Pfam PF06804 NlpB/DapX lipoprotein 36 233 1.2E-9 T 13-10-2018 IPR010653 NlpB/DapX lipoprotein Atc_2124 245a56e55391631da4a825ab54b5af2c 68 TIGRFAM TIGR03738 PRTRC_C: PRTRC system protein C 5 68 1.8E-21 T 13-10-2018 IPR022289 ParB-related, ThiF-related cassette, protein C Atc_2124 245a56e55391631da4a825ab54b5af2c 68 Pfam PF14454 Prokaryotic Ubiquitin 4 65 3.4E-24 T 13-10-2018 IPR032866 Prokaryotic Ubiquitin Atc_2017 77a84685e5a722b0958231a17bb6c112 337 SUPERFAMILY SSF53067 4 165 9.71E-22 T 13-10-2018 Atc_2017 77a84685e5a722b0958231a17bb6c112 337 SUPERFAMILY SSF53067 177 332 1.12E-16 T 13-10-2018 Atc_2017 77a84685e5a722b0958231a17bb6c112 337 Gene3D G3DSA:3.30.420.40 182 314 4.2E-19 T 13-10-2018 Atc_2017 77a84685e5a722b0958231a17bb6c112 337 Gene3D G3DSA:3.30.420.40 4 181 2.9E-17 T 13-10-2018 Atc_1131 033c83cdaa2104a5ce380fd3ba69d67a 321 Pfam PF01609 Transposase DDE domain 147 311 6.5E-25 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1131 033c83cdaa2104a5ce380fd3ba69d67a 321 Pfam PF05598 Transposase domain (DUF772) 55 130 2.3E-21 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_2547 3e5af3b397a8a40ff388328cbd0d9c60 198 Gene3D G3DSA:1.20.120.1200 4 165 1.8E-43 T 13-10-2018 Atc_2547 3e5af3b397a8a40ff388328cbd0d9c60 198 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 163 8.1E-37 T 13-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_0177 264a2265505c18f43f79929ec7998ba2 168 Pfam PF05598 Transposase domain (DUF772) 52 127 2.5E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0483 14f55d235712e5d6cd1c0a2def5c8c6d 229 Gene3D G3DSA:3.30.450.40 43 224 1.2E-31 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_0483 14f55d235712e5d6cd1c0a2def5c8c6d 229 Pfam PF04340 Protein of unknown function, DUF484 9 220 6.1E-26 T 13-10-2018 IPR007435 Protein of unknown function DUF484 Atc_1796 fec0605038aeb93ffd46be65a1fefc84 135 Pfam PF09335 SNARE associated Golgi protein 5 130 2.4E-18 T 13-10-2018 IPR032816 SNARE associated Golgi protein Atc_1985 a417da7584a2ee93c9baaef3304cce42 86 SUPERFAMILY SSF46955 33 82 2.01E-6 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Atc_1985 a417da7584a2ee93c9baaef3304cce42 86 Pfam PF12728 Helix-turn-helix domain 35 81 2.0E-8 T 13-10-2018 Atc_0052 e21f0bbb93f0f11de8fa59690a9c9fd7 233 Pfam PF04402 Protein of unknown function (DUF541) 37 208 6.0E-11 T 13-10-2018 IPR007497 Protein of unknown function DUF541 Atc_2793 7d6c11b83d0913cf937c1c0a91609006 143 Pfam PF01553 Acyltransferase 3 91 3.1E-9 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Atc_2793 7d6c11b83d0913cf937c1c0a91609006 143 SUPERFAMILY SSF69593 8 141 1.57E-17 T 13-10-2018 Atc_2793 7d6c11b83d0913cf937c1c0a91609006 143 SMART SM00563 2 96 6.6E-6 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Atc_2313 40be7596f6f29bfbc708dfb1443a6669 172 Pfam PF13302 Acetyltransferase (GNAT) domain 9 145 4.1E-26 T 13-10-2018 IPR000182 GNAT domain Atc_2313 40be7596f6f29bfbc708dfb1443a6669 172 Gene3D G3DSA:3.40.630.30 4 168 1.3E-35 T 13-10-2018 Atc_2313 40be7596f6f29bfbc708dfb1443a6669 172 SUPERFAMILY SSF55729 6 162 1.17E-36 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atc_0393 dea98842d64865e7850605e1ffa0469a 246 Pfam PF04367 Protein of unknown function (DUF502) 81 184 7.5E-26 T 13-10-2018 IPR007462 Protein of unknown function DUF502 Atc_1567 f47a9a63fbaf1f8214bff97fdfde017a 137 Pfam PF05598 Transposase domain (DUF772) 54 120 1.1E-20 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_1108 678b5ecf1d68f0451ede87a5458bdf81 31 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 23 0.002 T 13-10-2018 Atc_2243 f892a366d0110a0b059cc83bfa872e1b 833 Pfam PF12704 MacB-like periplasmic core domain 23 223 6.4E-13 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Atc_2243 f892a366d0110a0b059cc83bfa872e1b 833 Pfam PF02687 FtsX-like permease family 282 381 6.6E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Atc_2243 f892a366d0110a0b059cc83bfa872e1b 833 Pfam PF02687 FtsX-like permease family 732 823 3.3E-12 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Atc_1772 33216997ce53fc65ab9de17d02f5f29d 195 Pfam PF05137 Fimbrial assembly protein (PilN) 100 176 8.9E-20 T 13-10-2018 IPR007813 Fimbrial assembly PilN Atc_2232 a06dafafe1840b344e030e46436e2483 281 SUPERFAMILY SSF47240 32 203 4.76E-18 T 13-10-2018 IPR009078 Ferritin-like superfamily Atc_1078 fdc2c0321847844eae80b615477e40c6 371 Pfam PF12698 ABC-2 family transporter protein 24 363 6.5E-42 T 13-10-2018 Atc_2041 a1e467844347f319ac846478ad9d421c 428 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 354 423 2.0E-9 T 13-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal Atc_m088 8f80ee091f067c549254a2e93aae5def 68 Gene3D G3DSA:3.30.70.100 4 67 5.8E-24 T 13-10-2018 Atc_m088 8f80ee091f067c549254a2e93aae5def 68 SUPERFAMILY SSF55008 3 66 6.41E-19 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atc_m088 8f80ee091f067c549254a2e93aae5def 68 Pfam PF00403 Heavy-metal-associated domain 7 63 4.1E-14 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atc_m088 8f80ee091f067c549254a2e93aae5def 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atc_m239 30d6266f89403b16223c9a5575a89528 349 Pfam PF13614 AAA domain 73 248 8.3E-32 T 13-10-2018 IPR025669 AAA domain Atc_m239 30d6266f89403b16223c9a5575a89528 349 SUPERFAMILY SSF52540 72 337 3.55E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atc_m239 30d6266f89403b16223c9a5575a89528 349 Gene3D G3DSA:3.40.50.300 68 340 4.7E-48 T 13-10-2018 Atc_2218 d856832ce3a9e0d884e702d102e4abf3 170 SUPERFAMILY SSF103247 27 153 6.8E-6 T 13-10-2018 IPR035923 TT1751-like domain superfamily Atc_m031 fd2097790ab37a24251826bffbb0237d 340 Pfam PF05598 Transposase domain (DUF772) 58 130 5.3E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_m031 fd2097790ab37a24251826bffbb0237d 340 Pfam PF01609 Transposase DDE domain 145 332 4.9E-30 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_0220 3e7f8544b621dd969e359f262170e4a5 261 Pfam PF01061 ABC-2 type transporter 18 221 9.8E-16 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Atc_0320 2de2259429699a9699967579c3e3b07a 205 Pfam PF01618 MotA/TolQ/ExbB proton channel family 70 189 9.8E-37 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atc_1073 efde0d41ae6013be026ca54cdd24f89c 95 Pfam PF10048 Predicted integral membrane protein (DUF2282) 43 91 8.1E-19 T 13-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane Atc_0181 3726f514a08ea9fe95ff0591cee856aa 340 Pfam PF05598 Transposase domain (DUF772) 58 130 5.9E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_0181 3726f514a08ea9fe95ff0591cee856aa 340 Pfam PF01609 Transposase DDE domain 150 332 1.4E-28 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_2340 bbaf2a2ccc8e3b36bc562f8047ec8e12 376 Pfam PF04055 Radical SAM superfamily 64 240 1.2E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atc_2340 bbaf2a2ccc8e3b36bc562f8047ec8e12 376 Gene3D G3DSA:3.20.20.70 48 287 1.1E-16 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atc_2340 bbaf2a2ccc8e3b36bc562f8047ec8e12 376 SMART SM00729 57 278 2.9E-17 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atc_2340 bbaf2a2ccc8e3b36bc562f8047ec8e12 376 SUPERFAMILY SSF102114 54 277 4.19E-25 T 13-10-2018 Atc_1843 4e70c4d22aa76e76887f29cb7d5d9824 64 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 54 6.5E-12 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA Atc_1843 4e70c4d22aa76e76887f29cb7d5d9824 64 Gene3D G3DSA:1.10.238.160 4 61 3.0E-5 T 13-10-2018 Atc_0046 e07eb8adbb8a01fea0421428507e151c 427 Pfam PF16963 PelD GGDEF domain 302 423 2.9E-34 T 13-10-2018 IPR031583 PelD, GGDEF domain Atc_0046 e07eb8adbb8a01fea0421428507e151c 427 Gene3D G3DSA:3.30.450.40 145 291 2.0E-22 T 13-10-2018 IPR029016 GAF-like domain superfamily Atc_m216 9f87ff3e5d1f2f1e33db0742df0faf60 268 Pfam PF05598 Transposase domain (DUF772) 58 130 5.2E-22 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Atc_2022 b97b1641daeaf677bf08441d06566d4f 316 Pfam PF08346 AntA/AntB antirepressor 14 83 6.4E-28 T 13-10-2018 IPR013557 AntA/AntB antirepressor Atc_0322 6218b3b5050ba41bf60ee60019c4d369 237 Pfam PF04028 Domain of unknown function (DUF374) 67 131 1.6E-27 T 13-10-2018 IPR007172 Domain of unknown function DUF374 Atc_0322 6218b3b5050ba41bf60ee60019c4d369 237 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 21 130 7.0E-20 T 13-10-2018 IPR007172 Domain of unknown function DUF374 Atc_0458 ac5cefad3417abc6d3faf383865f352b 99 Gene3D G3DSA:3.10.450.40 24 96 2.2E-13 T 13-10-2018 Atc_0458 ac5cefad3417abc6d3faf383865f352b 99 Pfam PF03413 Peptidase propeptide and YPEB domain 33 91 4.3E-10 T 13-10-2018 IPR025711 PepSY domain Atc_0840 0e3a9c9754e1c18674439fbb47c70486 181 Pfam PF09335 SNARE associated Golgi protein 22 144 2.0E-15 T 13-10-2018 IPR032816 SNARE associated Golgi protein Atc_1874 1c352b8955ef35c6bd6ba32f106eab10 150 Gene3D G3DSA:1.10.10.1320 12 92 1.1E-5 T 13-10-2018 Atc_2269 c3094fb453c51720f70b412df4e85df3 239 Pfam PF04338 Protein of unknown function, DUF481 34 239 2.0E-31 T 13-10-2018 IPR007433 Protein of unknown function DUF481 Atc_0726 775c386e9937952309d6afae950391f5 372 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 6 355 2.7E-71 T 13-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 Atc_0726 775c386e9937952309d6afae950391f5 372 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 355 8.7E-57 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Atc_m073 b67003e9b00fb5263edd75997653f7f4 470 Pfam PF01566 Natural resistance-associated macrophage protein 84 439 3.4E-56 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atc_1869 09c0dcb9f34f70b5772b5febec23b228 313 SUPERFAMILY SSF103190 40 138 1.26E-17 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Atc_1869 09c0dcb9f34f70b5772b5febec23b228 313 Gene3D G3DSA:3.30.450.20 4 136 1.8E-16 T 13-10-2018 Atc_0969 55a762e496acbc225eaebf414d0ac5db 253 Pfam PF01925 Sulfite exporter TauE/SafE 23 250 4.5E-30 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Atc_2290 630c05461543c4d609ff93c1155099ff 176 Pfam PF06146 Phosphate-starvation-inducible E 77 146 1.2E-13 T 13-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like Atc_1747 2af8659d3c2558549525b34c30b275ba 73 Pfam PF11127 Protein of unknown function (DUF2892) 4 62 1.4E-11 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 Atc_m211 177c1aaa88a1f384c9b13ecc778fcef5 436 Pfam PF00872 Transposase, Mutator family 34 400 5.6E-66 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Atc_1862 2a0b05319c08297184136866cff5a05f 416 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 47 354 3.2E-59 T 13-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 Atc_1862 2a0b05319c08297184136866cff5a05f 416 SUPERFAMILY SSF56935 51 349 3.5E-9 T 13-10-2018 Atc_0747 81bf9ae6e87c5c8e9332eacd78fb3131 94 SUPERFAMILY SSF47413 15 80 6.57E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atc_0747 81bf9ae6e87c5c8e9332eacd78fb3131 94 Gene3D G3DSA:1.10.260.40 10 81 4.1E-11 T 13-10-2018 Atc_0881 d14c91e2feeea7b6407e389eb0c53651 284 SUPERFAMILY SSF74653 124 275 7.98E-11 T 13-10-2018 Atc_0881 d14c91e2feeea7b6407e389eb0c53651 284 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 210 267 1.4E-7 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Atc_0881 d14c91e2feeea7b6407e389eb0c53651 284 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 211 272 2.9E-9 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Atc_m042 cc4643b11fc97669aa41e1540ef0220a 52 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 22 50 4.2E-5 T 13-10-2018 IPR010627 Peptidase A24A, N-terminal Atc_1106 54b4aacbc78c5b26e7160f8c9117e217 303 Pfam PF03573 outer membrane porin, OprD family 27 242 6.2E-9 T 13-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 Atc_1106 54b4aacbc78c5b26e7160f8c9117e217 303 Gene3D G3DSA:2.40.160.10 17 268 6.6E-16 T 13-10-2018 IPR023614 Porin domain superfamily Atc_2209 fc149675602bbe8e6f7b84e073b7c9c0 393 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 146 391 7.8E-67 T 13-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 Atc_2209 fc149675602bbe8e6f7b84e073b7c9c0 393 Pfam PF01578 Cytochrome C assembly protein 177 388 1.3E-43 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Atc_2p12 1d5bad3b4bbdfb159f9f459d74b16d74 329 Pfam PF04796 Plasmid encoded RepA protein 113 265 1.1E-29 T 13-10-2018 IPR006881 Plasmid encoded RepA protein Atc_0500 352c183ea31f1d3e7b2d47167e0966fb 355 Pfam PF13557 Putative MetA-pathway of phenol degradation 202 351 7.5E-6 T 13-10-2018 IPR025737 MetA-pathway of phenol degradation, putative Atc_2015 ef96ee37ec93c15cae23fd18a211b19b 572 Pfam PF07120 Protein of unknown function (DUF1376) 30 117 6.2E-6 T 13-10-2018 IPR010781 Protein of unknown function DUF1376 Atc_1681 b5a475671bdba98d43d70fe672851818 230 Pfam PF10099 Anti-sigma-K factor rskA 64 224 3.5E-28 T 13-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 Atc_1562 1e18d793d6aa7fecd1c65bdf32ab62a5 449 Pfam PF01757 Acyltransferase family 4 322 3.6E-16 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Atc_2813 a2dea7bdf8b3f3dbcbd2165da797b3e0 210 Pfam PF03006 Haemolysin-III related 6 200 1.9E-29 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Atc_2447 005347f34044d31ff41c793dba94459d 71 Pfam PF11127 Protein of unknown function (DUF2892) 4 62 5.2E-13 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 Atc_1170 41f4ac55fbc1182a5b443bd5cea41dcb 189 TIGRFAM TIGR03021 pilP_fam: type IV pilus biogenesis protein PilP 2 120 4.4E-13 T 13-10-2018 IPR022753 Type IV pilus biogenesis PilP Atc_m115 3dd7cc5b019cbafa2dca4b2d3de636f0 99 Pfam PF01402 Ribbon-helix-helix protein, copG family 14 48 3.2E-5 T 13-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Atc_1564 8c1b2601ca8149b6bc2d842702592dc4 249 SUPERFAMILY SSF52266 2 152 1.62E-10 T 13-10-2018 Atc_m077 693b8b46fc2680569ed1b4b9d94b83ae 68 SUPERFAMILY SSF161111 9 61 1.83E-6 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atc_1918 210e8d10dac74df724aa657ffa1aa610 157 Pfam PF00872 Transposase, Mutator family 18 147 1.8E-11 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Atc_m155 c941c9f4319f32045d6280344e049356 212 Pfam PF13240 zinc-ribbon domain 5 26 1.3E-6 T 13-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 Atc_1033 0acf14d729162e8d89a05d2550fb1023 754 Pfam PF13362 Toprim domain 250 349 3.0E-10 T 13-10-2018 IPR006171 TOPRIM domain Atc_2576 bfaff40028efd3d56abb3c8b9f5785a7 166 Gene3D G3DSA:1.20.120.1200 2 156 1.5E-25 T 13-10-2018 Atc_2576 bfaff40028efd3d56abb3c8b9f5785a7 166 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 153 3.9E-22 T 13-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atc_1655 4a657a0bae13f12a8e5af9344ea24a51 524 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 73 233 7.4E-31 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Atc_1555 e36bcab34c2b4126e77bb964e2494b51 166 Pfam PF03748 Flagellar basal body-associated protein FliL 56 166 8.9E-22 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Atc_0321 e4193922f9b592706487468a93b040ee 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 131 3.4E-32 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Atc_0321 e4193922f9b592706487468a93b040ee 135 Gene3D G3DSA:3.30.420.270 59 128 7.0E-13 T 13-10-2018 Atc_0715 1ad52918de3adbbe3cd5668bd08b59f5 258 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 34 254 2.9E-61 T 13-10-2018 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane Atc_0290 25caaef9f0b880746ab823723f82e2ac 195 Pfam PF16694 Cytochrome P460 67 156 3.5E-7 T 13-10-2018 IPR032033 Cytochrome P460 Atc_0054 5b6e47de379d0a34bc7199768bf1352d 95 Gene3D G3DSA:1.10.1660.10 17 95 1.0E-19 T 13-10-2018 Atc_0054 5b6e47de379d0a34bc7199768bf1352d 95 Pfam PF13591 MerR HTH family regulatory protein 23 93 1.8E-14 T 13-10-2018 Atc_1486 6ab27399afffdb86a67e714f366e444a 249 PRINTS PR01003 Flagellar assembly protein FliH signature 116 133 4.0E-8 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Atc_1486 6ab27399afffdb86a67e714f366e444a 249 PRINTS PR01003 Flagellar assembly protein FliH signature 96 115 4.0E-8 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Atc_1486 6ab27399afffdb86a67e714f366e444a 249 PRINTS PR01003 Flagellar assembly protein FliH signature 77 95 4.0E-8 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Atc_1486 6ab27399afffdb86a67e714f366e444a 249 PRINTS PR01003 Flagellar assembly protein FliH signature 157 184 4.0E-8 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Atc_1486 6ab27399afffdb86a67e714f366e444a 249 Pfam PF02108 Flagellar assembly protein FliH 96 201 2.1E-28 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Atc_2300 ecee7cb7e3d4a7edb97a9c534b02a52c 110 Pfam PF16137 Domain of unknown function (DUF4845) 22 106 1.6E-20 T 13-10-2018 IPR032314 Protein of unknown function DUF4845 Atc_0127 88cad0d5f3ed4aba4caa2b105fdc489d 546 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 225 1.3E-19 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Atc_1169 dadcb4afb8c4e0f3450b5f2477387222 452 Pfam PF06864 Pilin accessory protein (PilO) 14 423 1.9E-118 T 13-10-2018 IPR009663 Pilin accessory predicted Atc_2743 084dbae11bef15e05b874a62acea9f5e 418 SUPERFAMILY SSF53955 199 373 1.8E-22 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Atc_0378 3510c839a587a31f070fdc6ad886abdc 101 Pfam PF11839 Alanine-zipper, major outer membrane lipoprotein 34 101 1.1E-16 T 13-10-2018 IPR021793 Major outer membrane lipoprotein Oprl Atc_0212 e9e0f691253cec9c6a403d644bdcb3f0 177 SUPERFAMILY SSF53756 1 155 1.88E-6 T 13-10-2018 Atc_2705 9bf026fe43dc10570389e51d87558c85 51 Pfam PF13627 Prokaryotic lipoprotein-attachment site 11 32 7.3E-8 T 13-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site Atc_1725 41d870bfd70b4a39072e2cc73d6bb966 206 Pfam PF03458 UPF0126 domain 13 86 1.3E-20 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 Atc_1725 41d870bfd70b4a39072e2cc73d6bb966 206 Pfam PF03458 UPF0126 domain 98 169 4.4E-21 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 Atc_2002 264aebf077127d0b24367690a0cf4c37 230 Pfam PF14243 Domain of unknown function (DUF4343) 109 206 4.2E-12 T 13-10-2018 IPR025643 Protein of unknown function DUF4343 Atc_1593 d6c2bb904f01a0823c4f626666b457a7 85 Pfam PF00872 Transposase, Mutator family 2 83 1.3E-16 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Atc_2393 5b2beaed90cd3dbd2b474590e0c19ef4 447 Pfam PF02754 Cysteine-rich domain 253 351 3.1E-7 T 13-10-2018 IPR004017 Cysteine-rich domain Atc_m219 ba87fb5735b1607b8e572f20ab9206f2 185 Pfam PF01609 Transposase DDE domain 66 177 3.9E-19 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atc_1077 c85fbc95b09e442adfbc512fc7dcd395 369 Pfam PF12698 ABC-2 family transporter protein 31 361 1.0E-36 T 13-10-2018 Atc_2010 5a9943685688638d61f88258942b923a 160 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 20 154 3.1E-12 T 13-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase Atc_1978 a9ede2d0d7af82afe85b567292db6f23 365 Pfam PF11231 Protein of unknown function (DUF3034) 47 362 8.4E-111 T 13-10-2018 IPR021393 Protein of unknown function DUF3034 Atc_m170 128cb9d2c30584d88379b227f1182302 260 Pfam PF13391 HNH endonuclease 154 207 2.4E-7 T 13-10-2018 IPR003615 HNH nuclease Atc_1492 3b605a9f31529a98e68037806dd28f27 78 Pfam PF04347 Flagellar biosynthesis protein, FliO 1 46 1.2E-6 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Atc_1583 85ccf06e34af50564a2335f768e9e4a2 359 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 10 346 9.9E-74 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atc_0407 5901ed4572a6d279a740407f59d5b540 147 Pfam PF08897 Domain of unknown function (DUF1841) 1 127 1.5E-43 T 13-10-2018 IPR014993 Protein of unknown function DUF1841 Atc_1272 94502611ff53e5fd816875768f91faf9 338 SUPERFAMILY SSF141523 180 323 8.76E-11 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atc_2744 382f7c4fd75f3b862bc0b72ec1da57d5 312 Pfam PF07811 TadE-like protein 15 57 1.1E-10 T 13-10-2018 IPR012495 TadE-like Atc_0497 caba9f64584ce625c7e460eede6eb1b8 239 SUPERFAMILY SSF56281 57 177 2.43E-7 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atc_0134 a6bf7065b1f44a149b9816d8e3b7c458 232 Pfam PF02371 Transposase IS116/IS110/IS902 family 78 161 4.8E-24 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Atc_0998 4fbc27a2055f62f11fefd4cb1e51e930 187 Pfam PF03729 Short repeat of unknown function (DUF308) 27 93 6.2E-6 T 13-10-2018 IPR005325 Protein of unknown function DUF308, membrane Atc_2188 7a98c5c16da19cd8cf82dc857a6941b8 361 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 11 348 2.0E-75 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atc_2183 e8f6af9ade0c7864b729451902dcc7c6 169 SUPERFAMILY SSF54001 5 123 1.37E-6 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Atc_0114 74e7fd16a073b53139a0de5f0168fa33 88 SUPERFAMILY SSF46785 19 68 1.87E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atc_0679 280dda613fec9da9bff0c2601cc83d2c 225 Pfam PF01618 MotA/TolQ/ExbB proton channel family 88 191 1.2E-27 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atc_2027 d39e0f4141442ea7e2b80df9c4d6c8f8 360 Pfam PF01435 Peptidase family M48 214 316 9.0E-10 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Atc_2784 04eada4d2d2666eedc4d26c1253874b8 442 Gene3D G3DSA:2.40.160.10 174 442 3.3E-5 T 13-10-2018 IPR023614 Porin domain superfamily