Acife_2004 ed2e033a52871ca0bef02f08b52d4797 398 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 390 4.0E-179 T 12-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 Acife_2004 ed2e033a52871ca0bef02f08b52d4797 398 SUPERFAMILY SSF53383 2 391 1.2E-80 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_2004 ed2e033a52871ca0bef02f08b52d4797 398 Gene3D G3DSA:3.90.1150.10 13 377 1.4E-110 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_2004 ed2e033a52871ca0bef02f08b52d4797 398 Gene3D G3DSA:3.40.640.10 42 288 1.4E-110 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_2004 ed2e033a52871ca0bef02f08b52d4797 398 Pfam PF00155 Aminotransferase class I and II 29 386 6.8E-38 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.166 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 SUPERFAMILY SSF52540 151 336 1.69E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 8.9E-142 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 Pfam PF01018 GTP1/OBG 4 157 6.5E-58 T 12-10-2018 IPR006169 GTP1/OBG domain Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 Gene3D G3DSA:3.40.50.300 159 334 7.9E-52 T 12-10-2018 Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.7E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.7E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.7E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.7E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 PIRSF PIRSF002401 1 368 6.5E-132 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 SUPERFAMILY SSF82051 2 158 3.79E-54 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 Gene3D G3DSA:2.70.210.12 1 158 1.5E-58 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.1E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_2747 b3b13ae21f35e65bc4979599eab07e40 374 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Acife_2386 f2b2b89ee1e6e74f0cf1c94669147112 94 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 24 80 22.686 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2386 f2b2b89ee1e6e74f0cf1c94669147112 94 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 25 82 4.8E-25 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2386 f2b2b89ee1e6e74f0cf1c94669147112 94 Pfam PF01165 Ribosomal protein S21 26 78 3.1E-23 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2386 f2b2b89ee1e6e74f0cf1c94669147112 94 Gene3D G3DSA:1.20.5.1150 39 77 2.8E-20 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2386 f2b2b89ee1e6e74f0cf1c94669147112 94 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 37 67 3.0E-9 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2386 f2b2b89ee1e6e74f0cf1c94669147112 94 PRINTS PR00976 Ribosomal protein S21 family signature 28 36 9.4E-17 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2386 f2b2b89ee1e6e74f0cf1c94669147112 94 PRINTS PR00976 Ribosomal protein S21 family signature 60 70 9.4E-17 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2386 f2b2b89ee1e6e74f0cf1c94669147112 94 PRINTS PR00976 Ribosomal protein S21 family signature 36 45 9.4E-17 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2386 f2b2b89ee1e6e74f0cf1c94669147112 94 PRINTS PR00976 Ribosomal protein S21 family signature 48 58 9.4E-17 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2386 f2b2b89ee1e6e74f0cf1c94669147112 94 ProSitePatterns PS01181 Ribosomal protein S21 signature. 36 48 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1428 6427c420d9505704a9786a230f0007b4 746 Gene3D G3DSA:2.40.50.140 645 745 3.9E-22 T 12-10-2018 Acife_1428 6427c420d9505704a9786a230f0007b4 746 SMART SM00357 95 154 2.1E-19 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Acife_1428 6427c420d9505704a9786a230f0007b4 746 SMART SM00316 642 725 1.2E-13 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_1428 6427c420d9505704a9786a230f0007b4 746 SMART SM00955 269 596 9.2E-164 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Acife_1428 6427c420d9505704a9786a230f0007b4 746 Pfam PF00773 RNB domain 269 595 2.9E-103 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Acife_1428 6427c420d9505704a9786a230f0007b4 746 SUPERFAMILY SSF50249 76 156 3.22E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1428 6427c420d9505704a9786a230f0007b4 746 ProSitePatterns PS01175 Ribonuclease II family signature. 563 587 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site Acife_1428 6427c420d9505704a9786a230f0007b4 746 SUPERFAMILY SSF50249 642 725 2.98E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1428 6427c420d9505704a9786a230f0007b4 746 Gene3D G3DSA:2.40.50.140 84 156 3.0E-19 T 12-10-2018 Acife_1428 6427c420d9505704a9786a230f0007b4 746 Pfam PF00575 S1 RNA binding domain 641 723 4.3E-11 T 12-10-2018 IPR003029 S1 domain GO:0003676 Acife_1428 6427c420d9505704a9786a230f0007b4 746 Pfam PF08206 Ribonuclease B OB domain 96 153 6.5E-21 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Acife_1428 6427c420d9505704a9786a230f0007b4 746 Pfam PF08461 Ribonuclease R winged-helix domain 32 83 7.3E-7 T 12-10-2018 IPR013668 Ribonuclease R winged-helix domain Acife_1428 6427c420d9505704a9786a230f0007b4 746 Hamap MF_01895 Ribonuclease R [rnr]. 48 725 56.202 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Acife_1428 6427c420d9505704a9786a230f0007b4 746 TIGRFAM TIGR02063 RNase_R: ribonuclease R 30 723 1.3E-252 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Acife_1428 6427c420d9505704a9786a230f0007b4 746 SUPERFAMILY SSF50249 196 642 1.14E-140 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1428 6427c420d9505704a9786a230f0007b4 746 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 76 724 8.3E-218 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Acife_1285 53b9597c14e8cd61261a075b6b21ffbd 419 SUPERFAMILY SSF52540 78 361 4.53E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1285 53b9597c14e8cd61261a075b6b21ffbd 419 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Acife_1285 53b9597c14e8cd61261a075b6b21ffbd 419 SMART SM00490 261 342 1.5E-33 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1285 53b9597c14e8cd61261a075b6b21ffbd 419 Gene3D G3DSA:3.40.50.300 216 380 3.3E-53 T 12-10-2018 Acife_1285 53b9597c14e8cd61261a075b6b21ffbd 419 Gene3D G3DSA:3.40.50.300 1 214 1.7E-78 T 12-10-2018 Acife_1285 53b9597c14e8cd61261a075b6b21ffbd 419 SMART SM00487 21 225 1.3E-59 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_1285 53b9597c14e8cd61261a075b6b21ffbd 419 Pfam PF00271 Helicase conserved C-terminal domain 236 342 1.4E-28 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1285 53b9597c14e8cd61261a075b6b21ffbd 419 Pfam PF00270 DEAD/DEAH box helicase 26 196 5.7E-50 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Acife_1962 b05fcd40b53d5ff251f8acb20a27c338 108 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 2.0E-9 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1962 b05fcd40b53d5ff251f8acb20a27c338 108 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 2.0E-9 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1962 b05fcd40b53d5ff251f8acb20a27c338 108 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 2.0E-9 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1962 b05fcd40b53d5ff251f8acb20a27c338 108 Gene3D G3DSA:4.10.520.10 1 94 4.3E-29 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_1962 b05fcd40b53d5ff251f8acb20a27c338 108 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.2E-25 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1962 b05fcd40b53d5ff251f8acb20a27c338 108 SUPERFAMILY SSF47729 3 92 6.04E-25 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_1962 b05fcd40b53d5ff251f8acb20a27c338 108 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Acife_1962 b05fcd40b53d5ff251f8acb20a27c338 108 SMART SM00411 3 92 4.6E-27 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 Gene3D G3DSA:3.50.50.60 109 444 1.3E-98 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 SUPERFAMILY SSF51905 1 342 9.84E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 Gene3D G3DSA:3.50.50.60 8 343 1.3E-98 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 5.3E-23 T 12-10-2018 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 392 407 5.3E-23 T 12-10-2018 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 278 285 5.3E-23 T 12-10-2018 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 5.3E-23 T 12-10-2018 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 5.3E-23 T 12-10-2018 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 435 3.3E-12 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 306 7.8E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.9E-24 T 12-10-2018 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 6.9E-24 T 12-10-2018 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 6.9E-24 T 12-10-2018 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.9E-24 T 12-10-2018 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 6.9E-24 T 12-10-2018 Acife_2017 42e44c7de5aafbd444f71b0231e14e05 465 SUPERFAMILY SSF55424 329 449 3.95E-20 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_3155 7e5f0216466c01c4a0b7468985a38a4f 505 Gene3D G3DSA:3.50.50.60 415 502 1.6E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3155 7e5f0216466c01c4a0b7468985a38a4f 505 Gene3D G3DSA:3.50.50.60 1 139 9.5E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3155 7e5f0216466c01c4a0b7468985a38a4f 505 SUPERFAMILY SSF51905 1 499 2.78E-64 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3155 7e5f0216466c01c4a0b7468985a38a4f 505 Pfam PF05199 GMC oxidoreductase 382 491 3.6E-22 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Acife_3155 7e5f0216466c01c4a0b7468985a38a4f 505 Gene3D G3DSA:3.50.50.60 196 294 1.6E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3155 7e5f0216466c01c4a0b7468985a38a4f 505 Pfam PF00732 GMC oxidoreductase 4 297 1.8E-10 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Acife_2253 141da621c9b74849f6b9925dbb92e4a3 432 Gene3D G3DSA:1.10.287.1120 166 417 2.0E-89 T 12-10-2018 Acife_2253 141da621c9b74849f6b9925dbb92e4a3 432 Gene3D G3DSA:3.90.220.20 222 374 2.0E-89 T 12-10-2018 Acife_2253 141da621c9b74849f6b9925dbb92e4a3 432 Gene3D G3DSA:3.90.220.20 13 421 2.0E-89 T 12-10-2018 Acife_2253 141da621c9b74849f6b9925dbb92e4a3 432 Pfam PF01420 Type I restriction modification DNA specificity domain 220 400 3.0E-13 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Acife_2253 141da621c9b74849f6b9925dbb92e4a3 432 Pfam PF01420 Type I restriction modification DNA specificity domain 16 188 1.4E-18 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Acife_2253 141da621c9b74849f6b9925dbb92e4a3 432 SUPERFAMILY SSF116734 6 219 7.36E-42 T 12-10-2018 Acife_2253 141da621c9b74849f6b9925dbb92e4a3 432 SUPERFAMILY SSF116734 210 422 5.4E-38 T 12-10-2018 Acife_1906 79d73c0795941d48e62a741dcaa559ae 106 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 13 92 5.3E-13 T 12-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB Acife_1906 79d73c0795941d48e62a741dcaa559ae 106 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 16 96 0.006 T 12-10-2018 Acife_1407 ef3f7d6187f0fb4abf9d46cef0aa6944 206 Gene3D G3DSA:2.10.109.10 82 204 7.7E-40 T 12-10-2018 Acife_1407 ef3f7d6187f0fb4abf9d46cef0aa6944 206 Pfam PF00717 Peptidase S24-like 116 181 1.0E-12 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Acife_1407 ef3f7d6187f0fb4abf9d46cef0aa6944 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 29.594 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Acife_1407 ef3f7d6187f0fb4abf9d46cef0aa6944 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.2E-11 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Acife_1407 ef3f7d6187f0fb4abf9d46cef0aa6944 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 124 135 1.2E-11 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Acife_1407 ef3f7d6187f0fb4abf9d46cef0aa6944 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 113 123 1.2E-11 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Acife_1407 ef3f7d6187f0fb4abf9d46cef0aa6944 206 SUPERFAMILY SSF46785 3 69 1.69E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1407 ef3f7d6187f0fb4abf9d46cef0aa6944 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 201 1.4E-63 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Acife_1407 ef3f7d6187f0fb4abf9d46cef0aa6944 206 SUPERFAMILY SSF51306 77 201 5.06E-35 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Acife_1407 ef3f7d6187f0fb4abf9d46cef0aa6944 206 Pfam PF01726 LexA DNA binding domain 1 65 3.7E-22 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Acife_1407 ef3f7d6187f0fb4abf9d46cef0aa6944 206 Gene3D G3DSA:1.10.10.10 1 69 4.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1264 a05448dbfd038954c674e09a174c474e 570 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 568 41.083 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Acife_1264 a05448dbfd038954c674e09a174c474e 570 PIRSF PIRSF001535 1 569 2.8E-261 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Acife_1264 a05448dbfd038954c674e09a174c474e 570 SUPERFAMILY SSF55681 9 475 1.77E-107 T 12-10-2018 Acife_1264 a05448dbfd038954c674e09a174c474e 570 Gene3D G3DSA:3.40.50.800 4 551 2.2E-237 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily Acife_1264 a05448dbfd038954c674e09a174c474e 570 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 456 7.4E-49 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_1264 a05448dbfd038954c674e09a174c474e 570 Pfam PF03129 Anticodon binding domain 473 565 5.9E-13 T 12-10-2018 IPR004154 Anticodon-binding Acife_1264 a05448dbfd038954c674e09a174c474e 570 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 564 4.2E-221 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Acife_1264 a05448dbfd038954c674e09a174c474e 570 Pfam PF04073 Aminoacyl-tRNA editing domain 256 372 1.1E-19 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Acife_1264 a05448dbfd038954c674e09a174c474e 570 Gene3D G3DSA:3.30.930.10 11 462 2.2E-237 T 12-10-2018 Acife_1264 a05448dbfd038954c674e09a174c474e 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.4E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Acife_1264 a05448dbfd038954c674e09a174c474e 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.4E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Acife_1264 a05448dbfd038954c674e09a174c474e 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.4E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Acife_1264 a05448dbfd038954c674e09a174c474e 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.4E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Acife_1264 a05448dbfd038954c674e09a174c474e 570 SUPERFAMILY SSF52954 461 566 4.74E-24 T 12-10-2018 Acife_1264 a05448dbfd038954c674e09a174c474e 570 SUPERFAMILY SSF55826 218 386 5.62E-29 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Acife_1264 a05448dbfd038954c674e09a174c474e 570 Gene3D G3DSA:3.90.960.10 240 385 2.2E-237 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Acife_1789 3e3943e6bb5cbc1bd70433a7a3337224 161 SUPERFAMILY SSF89963 90 161 8.63E-24 T 12-10-2018 IPR036183 YajQ-like superfamily Acife_1789 3e3943e6bb5cbc1bd70433a7a3337224 161 Gene3D G3DSA:3.30.70.860 3 160 1.2E-56 T 12-10-2018 IPR035571 UPF0234-like, C-terminal Acife_1789 3e3943e6bb5cbc1bd70433a7a3337224 161 SUPERFAMILY SSF89963 2 86 9.02E-31 T 12-10-2018 IPR036183 YajQ-like superfamily Acife_1789 3e3943e6bb5cbc1bd70433a7a3337224 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.5E-60 T 12-10-2018 IPR007551 Protein of unknown function DUF520 Acife_1789 3e3943e6bb5cbc1bd70433a7a3337224 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 26.941 T 12-10-2018 IPR007551 Protein of unknown function DUF520 Acife_1789 3e3943e6bb5cbc1bd70433a7a3337224 161 Gene3D G3DSA:3.30.70.990 9 98 1.2E-56 T 12-10-2018 IPR035570 UPF0234, N-terminal Acife_2742 492de982ae4e643a065433470fe872f9 784 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 782 37.515 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Acife_2742 492de982ae4e643a065433470fe872f9 784 Gene3D G3DSA:3.20.20.210 6 548 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Acife_2742 492de982ae4e643a065433470fe872f9 784 Gene3D G3DSA:3.20.20.210 413 780 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Acife_2742 492de982ae4e643a065433470fe872f9 784 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 338 1.8E-120 T 12-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Acife_2742 492de982ae4e643a065433470fe872f9 784 PIRSF PIRSF000382 1 184 5.7E-68 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Acife_2742 492de982ae4e643a065433470fe872f9 784 PIRSF PIRSF000382 194 784 2.3E-257 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Acife_2742 492de982ae4e643a065433470fe872f9 784 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 455 777 1.0E-154 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Acife_2742 492de982ae4e643a065433470fe872f9 784 SUPERFAMILY SSF51726 5 418 2.22E-107 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Acife_2742 492de982ae4e643a065433470fe872f9 784 SUPERFAMILY SSF51726 420 781 1.7E-121 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Acife_1642 80fcd5cea37be6e71b20a9df6971f718 154 Pfam PF03270 Protein of unknown function, DUF269 33 153 2.2E-55 T 12-10-2018 IPR004952 Uncharacterised protein family UPF0460 Acife_1642 80fcd5cea37be6e71b20a9df6971f718 154 PIRSF PIRSF005788 1 154 2.8E-70 T 12-10-2018 IPR004952 Uncharacterised protein family UPF0460 Acife_1642 80fcd5cea37be6e71b20a9df6971f718 154 Gene3D G3DSA:1.10.3100.20 1 154 8.0E-73 T 12-10-2018 Acife_1642 80fcd5cea37be6e71b20a9df6971f718 154 TIGRFAM TIGR02935 TIGR02935: probable nitrogen fixation protein 13 152 8.2E-68 T 12-10-2018 IPR004952 Uncharacterised protein family UPF0460 Acife_0649 f7abf0610867d8b607305a228e8f903f 753 Gene3D G3DSA:3.30.365.10 4 749 3.0E-200 T 12-10-2018 Acife_0649 f7abf0610867d8b607305a228e8f903f 753 SMART SM01008 27 130 8.2E-4 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Acife_0649 f7abf0610867d8b607305a228e8f903f 753 SUPERFAMILY SSF56003 137 746 3.14E-164 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Acife_0649 f7abf0610867d8b607305a228e8f903f 753 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 28 125 2.2E-9 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Acife_0649 f7abf0610867d8b607305a228e8f903f 753 SUPERFAMILY SSF54665 18 124 1.3E-14 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Acife_0649 f7abf0610867d8b607305a228e8f903f 753 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 149 687 4.8E-153 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Acife_2705 0fa3a3c83824d055495d44e835ab41ab 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2705 0fa3a3c83824d055495d44e835ab41ab 110 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 2.4E-33 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Acife_2705 0fa3a3c83824d055495d44e835ab41ab 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.135 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2705 0fa3a3c83824d055495d44e835ab41ab 110 SUPERFAMILY SSF54843 4 109 9.03E-39 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Acife_2705 0fa3a3c83824d055495d44e835ab41ab 110 Gene3D G3DSA:3.90.470.10 2 110 9.1E-44 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Acife_2705 0fa3a3c83824d055495d44e835ab41ab 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 3.7E-41 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 Pfam PF02954 Bacterial regulatory protein, Fis family 406 445 1.0E-4 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 Gene3D G3DSA:1.10.8.60 311 389 1.7E-15 T 12-10-2018 Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 SMART SM00448 9 120 4.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 Pfam PF00072 Response regulator receiver domain 12 120 3.8E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 SUPERFAMILY SSF52540 140 381 9.57E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 Pfam PF00158 Sigma-54 interaction domain 140 306 2.4E-64 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 Gene3D G3DSA:3.40.50.300 136 310 1.5E-60 T 12-10-2018 Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 SUPERFAMILY SSF52172 11 183 1.22E-38 T 12-10-2018 IPR011006 CheY-like superfamily Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 SUPERFAMILY SSF46689 354 448 4.93E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 Gene3D G3DSA:3.40.50.2300 11 135 5.6E-29 T 12-10-2018 Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Acife_2859 36bd22c1a67c13f263e6267d1663d77b 452 SMART SM00382 160 303 5.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1046 bdc7ae72da6daff57e77d7344bd068d5 191 Pfam PF00239 Resolvase, N terminal domain 3 135 6.9E-44 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Acife_1046 bdc7ae72da6daff57e77d7344bd068d5 191 SMART SM00857 2 136 5.8E-57 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Acife_1046 bdc7ae72da6daff57e77d7344bd068d5 191 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Acife_1046 bdc7ae72da6daff57e77d7344bd068d5 191 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Acife_1046 bdc7ae72da6daff57e77d7344bd068d5 191 SUPERFAMILY SSF53041 1 135 7.98E-46 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Acife_1046 bdc7ae72da6daff57e77d7344bd068d5 191 Gene3D G3DSA:3.40.50.1390 1 125 5.5E-49 T 12-10-2018 Acife_1046 bdc7ae72da6daff57e77d7344bd068d5 191 SUPERFAMILY SSF46689 138 180 2.15E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_1046 bdc7ae72da6daff57e77d7344bd068d5 191 Pfam PF13551 Winged helix-turn helix 148 190 2.8E-9 T 12-10-2018 Acife_2993 ba6680f68e5306dec23dbf846c229e18 307 Pfam PF07728 AAA domain (dynein-related subfamily) 61 199 7.6E-25 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Acife_2993 ba6680f68e5306dec23dbf846c229e18 307 SUPERFAMILY SSF52540 32 267 2.67E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2993 ba6680f68e5306dec23dbf846c229e18 307 Gene3D G3DSA:3.40.50.300 47 217 4.0E-30 T 12-10-2018 Acife_2993 ba6680f68e5306dec23dbf846c229e18 307 SMART SM00382 56 168 9.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1999 8ac7069d33819cd5eb69161ad534a096 388 Pfam PF13406 Transglycosylase SLT domain 80 380 2.3E-74 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 Acife_1999 8ac7069d33819cd5eb69161ad534a096 388 SUPERFAMILY SSF53955 82 383 2.02E-63 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Acife_1999 8ac7069d33819cd5eb69161ad534a096 388 Gene3D G3DSA:1.10.8.350 85 255 5.0E-70 T 12-10-2018 Acife_1999 8ac7069d33819cd5eb69161ad534a096 388 Gene3D G3DSA:1.10.530.10 123 382 5.0E-70 T 12-10-2018 Acife_3206 991282e9042183f4b31a83bee5e07650 313 Gene3D G3DSA:1.20.58.340 131 255 8.9E-16 T 12-10-2018 Acife_3206 991282e9042183f4b31a83bee5e07650 313 SUPERFAMILY SSF143865 22 245 6.67E-35 T 12-10-2018 Acife_3206 991282e9042183f4b31a83bee5e07650 313 Gene3D G3DSA:3.30.460.20 9 130 5.2E-12 T 12-10-2018 Acife_3206 991282e9042183f4b31a83bee5e07650 313 SUPERFAMILY SSF144083 250 310 1.2E-12 T 12-10-2018 Acife_3206 991282e9042183f4b31a83bee5e07650 313 Gene3D G3DSA:1.20.58.340 257 313 1.1E-10 T 12-10-2018 Acife_3206 991282e9042183f4b31a83bee5e07650 313 Pfam PF01544 CorA-like Mg2+ transporter protein 24 309 1.7E-53 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Acife_2007 dcc6b11cb2b33b177bc244a195ce4a0d 274 Gene3D G3DSA:2.40.40.10 77 168 3.5E-30 T 12-10-2018 IPR036908 RlpA-like domain superfamily Acife_2007 dcc6b11cb2b33b177bc244a195ce4a0d 274 Pfam PF03330 Lytic transglycolase 77 165 1.8E-21 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Acife_2007 dcc6b11cb2b33b177bc244a195ce4a0d 274 SUPERFAMILY SSF50685 78 164 2.02E-10 T 12-10-2018 IPR036908 RlpA-like domain superfamily Acife_2007 dcc6b11cb2b33b177bc244a195ce4a0d 274 Gene3D G3DSA:3.30.70.1070 201 273 3.3E-7 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Acife_2007 dcc6b11cb2b33b177bc244a195ce4a0d 274 SUPERFAMILY SSF110997 201 270 9.29E-11 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Acife_2007 dcc6b11cb2b33b177bc244a195ce4a0d 274 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 79 178 4.6E-31 T 12-10-2018 IPR012997 Rare lipoprotein A Acife_2007 dcc6b11cb2b33b177bc244a195ce4a0d 274 Pfam PF05036 Sporulation related domain 201 266 4.9E-8 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Acife_2007 dcc6b11cb2b33b177bc244a195ce4a0d 274 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 13 168 21.267 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 440 597 4.5E-42 T 12-10-2018 IPR000160 GGDEF domain Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 338 436 1.6E-9 T 12-10-2018 IPR000014 PAS domain Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 130 5.3E-15 T 12-10-2018 IPR000014 PAS domain Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 Pfam PF13185 GAF domain 161 303 7.5E-14 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 SMART SM00267 433 609 4.0E-55 T 12-10-2018 IPR000160 GGDEF domain Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 SMART SM00086 86 125 0.25 T 12-10-2018 IPR001610 PAC motif Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 SMART SM00086 392 433 0.03 T 12-10-2018 IPR001610 PAC motif Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 Gene3D G3DSA:3.30.450.40 131 317 5.9E-18 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 Pfam PF00990 Diguanylate cyclase, GGDEF domain 446 597 1.8E-45 T 12-10-2018 IPR000160 GGDEF domain Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 SMART SM00091 15 81 0.056 T 12-10-2018 IPR000014 PAS domain Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 SMART SM00091 317 386 8.1E-4 T 12-10-2018 IPR000014 PAS domain Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 SUPERFAMILY SSF141868 625 870 2.35E-61 T 12-10-2018 IPR035919 EAL domain superfamily Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 Gene3D G3DSA:3.20.20.450 622 873 2.0E-69 T 12-10-2018 IPR035919 EAL domain superfamily Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 SUPERFAMILY SSF55785 18 125 1.33E-18 T 12-10-2018 IPR035965 PAS domain superfamily Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 SUPERFAMILY SSF55781 163 316 1.02E-16 T 12-10-2018 Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 Gene3D G3DSA:3.30.450.20 4 122 7.5E-26 T 12-10-2018 Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 Pfam PF13426 PAS domain 338 432 5.0E-8 T 12-10-2018 IPR000014 PAS domain Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 Pfam PF13426 PAS domain 32 123 3.3E-7 T 12-10-2018 IPR000014 PAS domain Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 SUPERFAMILY SSF55073 449 597 5.18E-47 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 SUPERFAMILY SSF55785 306 431 3.06E-14 T 12-10-2018 IPR035965 PAS domain superfamily Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 Gene3D G3DSA:3.30.70.270 438 602 1.3E-54 T 12-10-2018 Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 Pfam PF00563 EAL domain 625 858 1.5E-56 T 12-10-2018 IPR001633 EAL domain Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 Gene3D G3DSA:3.30.450.20 320 436 2.1E-18 T 12-10-2018 Acife_2934 fe7c2dd7bd83c2bdcacdd20f9edb00c8 998 SMART SM00052 619 863 8.7E-62 T 12-10-2018 IPR001633 EAL domain Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 Gene3D G3DSA:1.20.150.20 384 514 7.3E-47 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 51.464 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 PIRSF PIRSF039088 2 514 6.7E-236 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 SUPERFAMILY SSF52540 96 382 5.0E-97 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 2.3E-46 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 Gene3D G3DSA:2.40.30.20 2 94 3.9E-28 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 SUPERFAMILY SSF50615 11 95 7.85E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 Gene3D G3DSA:3.40.50.300 95 383 3.5E-133 T 12-10-2018 Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 SUPERFAMILY SSF47917 384 511 2.01E-45 T 12-10-2018 Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 93 1.8E-12 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 511 2.1E-252 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3192 3eccdacb0d5d585fe1cf3717be10dd69 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 4.8E-76 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 Gene3D G3DSA:3.30.2090.10 176 267 1.9E-244 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 Gene3D G3DSA:1.20.1640.10 496 997 1.9E-244 T 12-10-2018 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 SUPERFAMILY SSF82693 133 320 2.22E-20 T 12-10-2018 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 Gene3D G3DSA:3.30.2090.10 702 790 1.9E-244 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 Gene3D G3DSA:3.30.70.1430 38 798 1.9E-244 T 12-10-2018 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 SUPERFAMILY SSF82693 549 640 4.97E-12 T 12-10-2018 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 Gene3D G3DSA:1.20.1640.10 13 495 1.9E-244 T 12-10-2018 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 SUPERFAMILY SSF82866 786 999 8.89E-30 T 12-10-2018 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 SUPERFAMILY SSF82714 180 261 4.45E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 SUPERFAMILY SSF82866 286 482 3.79E-36 T 12-10-2018 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 Pfam PF00873 AcrB/AcrD/AcrF family 8 999 3.7E-211 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 Gene3D G3DSA:3.30.70.1440 652 848 1.9E-244 T 12-10-2018 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 SUPERFAMILY SSF82693 38 121 1.2E-14 T 12-10-2018 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 Gene3D G3DSA:3.30.70.1320 129 320 1.9E-244 T 12-10-2018 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 Gene3D G3DSA:3.30.70.1430 552 651 1.9E-244 T 12-10-2018 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 SUPERFAMILY SSF82714 703 786 3.14E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.5E-40 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 PRINTS PR00702 Acriflavin resistance protein family signature 326 349 7.5E-40 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 PRINTS PR00702 Acriflavin resistance protein family signature 535 552 7.5E-40 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 PRINTS PR00702 Acriflavin resistance protein family signature 381 405 7.5E-40 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 PRINTS PR00702 Acriflavin resistance protein family signature 604 618 7.5E-40 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.5E-40 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 PRINTS PR00702 Acriflavin resistance protein family signature 353 374 7.5E-40 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 7.5E-40 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2127 57b5e0dbffaf7dfc636f2f452e83fa47 1014 PRINTS PR00702 Acriflavin resistance protein family signature 434 457 7.5E-40 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1317 e84c5e42b5c6abba2aa8ff11957cb5a5 154 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 146 6.5E-12 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Acife_1317 e84c5e42b5c6abba2aa8ff11957cb5a5 154 Gene3D G3DSA:1.20.120.910 23 154 1.1E-39 T 12-10-2018 Acife_1317 e84c5e42b5c6abba2aa8ff11957cb5a5 154 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 30 152 28.561 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Acife_1317 e84c5e42b5c6abba2aa8ff11957cb5a5 154 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 116 140 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Acife_1317 e84c5e42b5c6abba2aa8ff11957cb5a5 154 SUPERFAMILY SSF109635 19 112 4.18E-33 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily Acife_1317 e84c5e42b5c6abba2aa8ff11957cb5a5 154 PRINTS PR00618 DksA/TraR zinc finger signature 116 127 4.0E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Acife_1317 e84c5e42b5c6abba2aa8ff11957cb5a5 154 PRINTS PR00618 DksA/TraR zinc finger signature 128 140 4.0E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Acife_1317 e84c5e42b5c6abba2aa8ff11957cb5a5 154 SUPERFAMILY SSF57716 113 151 1.43E-10 T 12-10-2018 Acife_1317 e84c5e42b5c6abba2aa8ff11957cb5a5 154 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 34 142 6.2E-49 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Acife_1073 7194b3692bf7ce8634d4389757aced4d 263 Pfam PF00753 Metallo-beta-lactamase superfamily 25 223 4.8E-19 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_1073 7194b3692bf7ce8634d4389757aced4d 263 SMART SM00849 26 184 6.3E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_1073 7194b3692bf7ce8634d4389757aced4d 263 Gene3D G3DSA:3.60.15.10 7 242 3.0E-30 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_1073 7194b3692bf7ce8634d4389757aced4d 263 SUPERFAMILY SSF56281 8 243 3.5E-25 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_0036 52cf54dd6bb7723a66d2c039d2b66708 275 PIRSF PIRSF012318 2 269 3.0E-89 T 12-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 Acife_0036 52cf54dd6bb7723a66d2c039d2b66708 275 Pfam PF04305 Protein of unknown function (DUF455) 18 258 7.5E-92 T 12-10-2018 IPR007402 Protein of unknown function DUF455 Acife_0036 52cf54dd6bb7723a66d2c039d2b66708 275 SUPERFAMILY SSF47240 56 232 3.72E-19 T 12-10-2018 IPR009078 Ferritin-like superfamily Acife_1181 28f4e6fa30483daabdf067fc9025b193 375 Pfam PF02563 Polysaccharide biosynthesis/export protein 84 165 9.6E-21 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Acife_1181 28f4e6fa30483daabdf067fc9025b193 375 Gene3D G3DSA:3.30.1950.10 88 169 6.4E-51 T 12-10-2018 Acife_1181 28f4e6fa30483daabdf067fc9025b193 375 Gene3D G3DSA:3.10.560.10 255 338 6.4E-51 T 12-10-2018 Acife_1181 28f4e6fa30483daabdf067fc9025b193 375 Gene3D G3DSA:3.10.560.10 67 254 6.4E-51 T 12-10-2018 Acife_0591 576efe84763ee4b9ab97c5f5e1c23f3a 172 Gene3D G3DSA:3.90.20.20 4 109 1.1E-23 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Acife_0591 576efe84763ee4b9ab97c5f5e1c23f3a 172 SUPERFAMILY SSF58014 17 111 3.79E-23 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Acife_0591 576efe84763ee4b9ab97c5f5e1c23f3a 172 Hamap MF_01151 Protein GrpE [grpE]. 2 166 18.572 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Acife_0591 576efe84763ee4b9ab97c5f5e1c23f3a 172 SUPERFAMILY SSF51064 120 167 3.14E-14 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Acife_0591 576efe84763ee4b9ab97c5f5e1c23f3a 172 Pfam PF01025 GrpE 4 166 3.2E-45 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Acife_0591 576efe84763ee4b9ab97c5f5e1c23f3a 172 PRINTS PR00773 GrpE protein signature 36 52 2.4E-25 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Acife_0591 576efe84763ee4b9ab97c5f5e1c23f3a 172 PRINTS PR00773 GrpE protein signature 119 134 2.4E-25 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Acife_0591 576efe84763ee4b9ab97c5f5e1c23f3a 172 PRINTS PR00773 GrpE protein signature 145 164 2.4E-25 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Acife_0591 576efe84763ee4b9ab97c5f5e1c23f3a 172 PRINTS PR00773 GrpE protein signature 64 79 2.4E-25 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Acife_0591 576efe84763ee4b9ab97c5f5e1c23f3a 172 ProSitePatterns PS01071 grpE protein signature. 122 164 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Acife_0591 576efe84763ee4b9ab97c5f5e1c23f3a 172 Gene3D G3DSA:2.30.22.10 111 166 1.7E-19 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Acife_1159 4721aa1bc548ed1538ec6d433b577afb 294 Gene3D G3DSA:3.40.50.720 28 275 7.4E-84 T 12-10-2018 Acife_1159 4721aa1bc548ed1538ec6d433b577afb 294 Gene3D G3DSA:3.90.25.10 159 282 7.4E-84 T 12-10-2018 Acife_1159 4721aa1bc548ed1538ec6d433b577afb 294 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 110 138 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Acife_1159 4721aa1bc548ed1538ec6d433b577afb 294 Pfam PF16363 GDP-mannose 4,6 dehydratase 30 284 2.2E-56 T 12-10-2018 IPR016040 NAD(P)-binding domain Acife_1159 4721aa1bc548ed1538ec6d433b577afb 294 SUPERFAMILY SSF51735 1 291 8.25E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 Pfam PF00512 His Kinase A (phospho-acceptor) domain 304 363 5.9E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 SMART SM00387 408 515 2.4E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 Gene3D G3DSA:3.30.565.10 370 518 3.2E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 514 2.4E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 512 2.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 461 2.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 475 2.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 2.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 SUPERFAMILY SSF55874 358 515 1.13E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 SMART SM00388 302 367 1.2E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 Gene3D G3DSA:1.10.287.130 286 365 5.4E-13 T 12-10-2018 Acife_2487 dc9a4c8d6adb713fce6634883bcbde23 524 SUPERFAMILY SSF47384 290 363 1.16E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_0130 5b6b217828bfc6f66d532018e0595786 505 Pfam PF13440 Polysaccharide biosynthesis protein 57 346 6.3E-19 T 12-10-2018 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 Pfam PF00702 haloacid dehalogenase-like hydrolase 316 607 2.3E-25 T 12-10-2018 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 625 650 2.9E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 448 466 2.9E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 565 581 2.9E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 593 609 2.9E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 Gene3D G3DSA:3.40.1110.10 329 341 4.2E-84 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 Gene3D G3DSA:3.40.1110.10 398 499 1.0E-103 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 SUPERFAMILY SSF81665 12 850 3.01E-79 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 Gene3D G3DSA:3.40.50.1000 500 638 1.0E-103 T 12-10-2018 IPR023214 HAD superfamily Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 Gene3D G3DSA:3.40.50.1000 316 328 4.2E-84 T 12-10-2018 IPR023214 HAD superfamily Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 SUPERFAMILY SSF81653 108 215 3.01E-23 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 SUPERFAMILY SSF56784 317 674 9.7E-55 T 12-10-2018 IPR036412 HAD-like superfamily Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 SMART SM00831 10 70 4.1E-4 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 Pfam PF00690 Cation transporter/ATPase, N-terminus 15 64 4.9E-8 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 Gene3D G3DSA:2.70.150.10 13 221 4.2E-84 T 12-10-2018 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 Gene3D G3DSA:1.20.1110.10 48 315 4.2E-84 T 12-10-2018 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 Pfam PF00689 Cation transporting ATPase, C-terminus 677 848 1.2E-18 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 Gene3D G3DSA:1.20.1110.10 639 847 1.0E-103 T 12-10-2018 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 321 327 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 564 683 4.6E-33 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 209 340 9.0E-20 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 492 503 1.2E-38 T 12-10-2018 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 617 629 1.2E-38 T 12-10-2018 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 1.2E-38 T 12-10-2018 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 593 612 1.2E-38 T 12-10-2018 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 319 333 1.2E-38 T 12-10-2018 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 514 524 1.2E-38 T 12-10-2018 Acife_0110 8b0ba869d6088d339de4ee15521f342c 855 Pfam PF00122 E1-E2 ATPase 105 299 1.0E-41 T 12-10-2018 Acife_2615 91b6429f92a0b1d08806fabecf6a8c14 457 SUPERFAMILY SSF53383 6 441 1.67E-133 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_2615 91b6429f92a0b1d08806fabecf6a8c14 457 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 30 370 2.7E-74 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Acife_2615 91b6429f92a0b1d08806fabecf6a8c14 457 Gene3D G3DSA:3.40.640.10 63 354 3.2E-83 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_2615 91b6429f92a0b1d08806fabecf6a8c14 457 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 13 440 1.5E-210 T 12-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 Acife_2615 91b6429f92a0b1d08806fabecf6a8c14 457 Gene3D G3DSA:3.90.1150.160 356 457 6.5E-34 T 12-10-2018 Acife_1588 8a12776403f833221ace3cc98cce826b 793 Gene3D G3DSA:1.25.40.10 26 290 2.7E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 Pfam PF13432 Tetratricopeptide repeat 291 352 0.0011 T 12-10-2018 Acife_1588 8a12776403f833221ace3cc98cce826b 793 Pfam PF13432 Tetratricopeptide repeat 43 99 3.0E-5 T 12-10-2018 Acife_1588 8a12776403f833221ace3cc98cce826b 793 Pfam PF13432 Tetratricopeptide repeat 557 586 0.0074 T 12-10-2018 Acife_1588 8a12776403f833221ace3cc98cce826b 793 Pfam PF13432 Tetratricopeptide repeat 406 459 0.0022 T 12-10-2018 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SUPERFAMILY SSF48452 470 594 1.52E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SUPERFAMILY SSF48452 30 455 4.32E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SUPERFAMILY SSF48452 647 769 4.2E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 Pfam PF14559 Tetratricopeptide repeat 124 192 5.1E-6 T 12-10-2018 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SMART SM00028 400 433 15.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SMART SM00028 472 505 36.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SMART SM00028 31 64 36.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SMART SM00028 114 147 380.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SMART SM00028 65 98 3.1 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SMART SM00028 737 770 240.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SMART SM00028 319 352 95.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SMART SM00028 366 399 38.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SMART SM00028 285 318 140.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 SMART SM00028 551 584 370.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 Gene3D G3DSA:1.25.40.10 291 366 8.5E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 Pfam PF13181 Tetratricopeptide repeat 473 501 0.2 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 PRINTS PR01441 Cellulose synthase subunit C signature 149 161 3.3E-5 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 Acife_1588 8a12776403f833221ace3cc98cce826b 793 PRINTS PR01441 Cellulose synthase subunit C signature 179 196 3.3E-5 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 Acife_1588 8a12776403f833221ace3cc98cce826b 793 PRINTS PR01441 Cellulose synthase subunit C signature 389 409 3.3E-5 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 Acife_1588 8a12776403f833221ace3cc98cce826b 793 Gene3D G3DSA:1.25.40.10 644 777 4.1E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1588 8a12776403f833221ace3cc98cce826b 793 Gene3D G3DSA:1.25.40.10 367 564 3.3E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1242 78fc3c75e18a2ee7280932e30545670e 459 Gene3D G3DSA:3.20.20.110 137 439 1.6E-128 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_1242 78fc3c75e18a2ee7280932e30545670e 459 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 143 440 2.3E-114 T 12-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_1242 78fc3c75e18a2ee7280932e30545670e 459 Hamap MF_01339 Ribulose bisphosphate carboxylase [cbbM]. 1 459 78.295 T 12-10-2018 IPR020871 Ribulose bisphosphate carboxylase large subunit, type II GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_1242 78fc3c75e18a2ee7280932e30545670e 459 SUPERFAMILY SSF51649 138 455 3.01E-110 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_1242 78fc3c75e18a2ee7280932e30545670e 459 Gene3D G3DSA:3.30.70.150 5 136 3.0E-48 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_1242 78fc3c75e18a2ee7280932e30545670e 459 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 13 130 7.6E-37 T 12-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_1242 78fc3c75e18a2ee7280932e30545670e 459 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 186 194 - T 12-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_1242 78fc3c75e18a2ee7280932e30545670e 459 SUPERFAMILY SSF54966 2 137 3.93E-46 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2923 66292d09e6bedda07fbf592ecb526763 223 Pfam PF00117 Glutamine amidotransferase class-I 10 209 4.2E-18 T 12-10-2018 IPR017926 Glutamine amidotransferase Acife_2923 66292d09e6bedda07fbf592ecb526763 223 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 8 212 3.3E-64 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Acife_2923 66292d09e6bedda07fbf592ecb526763 223 SUPERFAMILY SSF52317 7 213 1.18E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_2923 66292d09e6bedda07fbf592ecb526763 223 PIRSF PIRSF000495 6 215 2.1E-68 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Acife_2923 66292d09e6bedda07fbf592ecb526763 223 Gene3D G3DSA:3.40.50.880 3 217 1.4E-69 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_2923 66292d09e6bedda07fbf592ecb526763 223 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 7 213 35.32 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Acife_0633 8ebbb7836022662df42c5be441e59523 250 Pfam PF13525 Outer membrane lipoprotein 33 228 6.0E-56 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Acife_0633 8ebbb7836022662df42c5be441e59523 250 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 4 240 6.0E-81 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD Acife_0633 8ebbb7836022662df42c5be441e59523 250 Gene3D G3DSA:1.25.40.10 33 244 6.0E-54 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0633 8ebbb7836022662df42c5be441e59523 250 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 235 33.793 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD Acife_0633 8ebbb7836022662df42c5be441e59523 250 SUPERFAMILY SSF48452 34 122 3.48E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_2452 5613efedcca5407299edaf634f1cc930 308 Pfam PF03466 LysR substrate binding domain 88 295 6.7E-50 T 12-10-2018 IPR005119 LysR, substrate-binding Acife_2452 5613efedcca5407299edaf634f1cc930 308 SUPERFAMILY SSF46785 4 111 7.52E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2452 5613efedcca5407299edaf634f1cc930 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 8.0E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_2452 5613efedcca5407299edaf634f1cc930 308 SUPERFAMILY SSF53850 86 299 8.54E-50 T 12-10-2018 Acife_2452 5613efedcca5407299edaf634f1cc930 308 Gene3D G3DSA:3.40.190.290 90 300 5.3E-49 T 12-10-2018 Acife_2452 5613efedcca5407299edaf634f1cc930 308 Gene3D G3DSA:1.10.10.10 1 89 6.8E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2452 5613efedcca5407299edaf634f1cc930 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_2452 5613efedcca5407299edaf634f1cc930 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_2452 5613efedcca5407299edaf634f1cc930 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 SUPERFAMILY SSF55326 618 815 2.54E-64 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 SUPERFAMILY SSF56042 431 654 2.54E-48 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 SUPERFAMILY SSF109736 159 222 3.79E-19 T 12-10-2018 Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1032 1280 3.9E-93 T 12-10-2018 Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 Gene3D G3DSA:1.10.8.750 155 215 3.1E-21 T 12-10-2018 Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1281 0.0 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 Gene3D G3DSA:3.90.650.10 421 604 6.1E-50 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 SUPERFAMILY SSF52317 1029 1282 5.13E-89 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 Gene3D G3DSA:3.30.1330.10 621 803 1.8E-23 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 Gene3D G3DSA:3.30.1330.10 216 420 2.6E-40 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 SUPERFAMILY SSF56042 820 1010 7.48E-42 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 Gene3D G3DSA:3.40.50.880 979 1283 2.8E-116 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 SUPERFAMILY SSF55326 224 422 6.98E-53 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 958 3.1E-12 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 585 1.4E-26 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 SUPERFAMILY SSF82697 1 154 7.32E-41 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1283 19.695 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 SMART SM01211 1032 1282 7.5E-137 T 12-10-2018 Acife_2406 6f441147ad6eb7d8c2057e98cf6812b5 1283 Gene3D G3DSA:3.90.650.10 804 978 2.5E-28 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Acife_2089 96ac529ad80f00c0d30e20b14381a0d3 493 SUPERFAMILY SSF52540 9 228 2.95E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2089 96ac529ad80f00c0d30e20b14381a0d3 493 Gene3D G3DSA:3.40.50.300 2 238 5.7E-41 T 12-10-2018 Acife_2089 96ac529ad80f00c0d30e20b14381a0d3 493 Gene3D G3DSA:3.40.50.300 244 482 1.7E-48 T 12-10-2018 Acife_2089 96ac529ad80f00c0d30e20b14381a0d3 493 PIRSF PIRSF039117 1 488 1.9E-135 T 12-10-2018 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Acife_2089 96ac529ad80f00c0d30e20b14381a0d3 493 Pfam PF06745 KaiC 11 229 4.3E-31 T 12-10-2018 IPR014774 KaiC-like domain Acife_2089 96ac529ad80f00c0d30e20b14381a0d3 493 Pfam PF06745 KaiC 252 466 2.6E-38 T 12-10-2018 IPR014774 KaiC-like domain Acife_2089 96ac529ad80f00c0d30e20b14381a0d3 493 SUPERFAMILY SSF52540 249 474 8.71E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0329 b96001b859c83ca725d7c991ec455a8b 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 8.6E-21 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal Acife_0329 b96001b859c83ca725d7c991ec455a8b 148 Gene3D G3DSA:3.10.430.100 61 147 3.4E-22 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Acife_0329 b96001b859c83ca725d7c991ec455a8b 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.3E-21 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0329 b96001b859c83ca725d7c991ec455a8b 148 SUPERFAMILY SSF55658 1 56 2.09E-17 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Acife_0329 b96001b859c83ca725d7c991ec455a8b 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.33 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_0329 b96001b859c83ca725d7c991ec455a8b 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0329 b96001b859c83ca725d7c991ec455a8b 148 SUPERFAMILY SSF55653 60 146 1.96E-21 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Acife_0329 b96001b859c83ca725d7c991ec455a8b 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 3.1E-40 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_0329 b96001b859c83ca725d7c991ec455a8b 148 Gene3D G3DSA:3.40.5.10 1 50 9.7E-22 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_3193 df98a2dd5d676a11c97f395fd24bdd13 179 SUPERFAMILY SSF47928 4 106 5.49E-18 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3193 df98a2dd5d676a11c97f395fd24bdd13 179 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.2E-17 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3193 df98a2dd5d676a11c97f395fd24bdd13 179 PRINTS PR00125 ATP synthase delta subunit signature 75 86 1.2E-17 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3193 df98a2dd5d676a11c97f395fd24bdd13 179 PRINTS PR00125 ATP synthase delta subunit signature 137 152 1.2E-17 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3193 df98a2dd5d676a11c97f395fd24bdd13 179 PRINTS PR00125 ATP synthase delta subunit signature 152 170 1.2E-17 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3193 df98a2dd5d676a11c97f395fd24bdd13 179 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 177 7.9E-34 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3193 df98a2dd5d676a11c97f395fd24bdd13 179 Gene3D G3DSA:1.10.520.20 2 107 1.4E-17 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3193 df98a2dd5d676a11c97f395fd24bdd13 179 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 139 158 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3193 df98a2dd5d676a11c97f395fd24bdd13 179 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 177 1.2E-42 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3193 df98a2dd5d676a11c97f395fd24bdd13 179 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 179 17.192 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_1397 4862bc3726c37c56d7d0b460f3b5b217 389 SUPERFAMILY SSF48452 41 247 2.01E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1397 4862bc3726c37c56d7d0b460f3b5b217 389 Gene3D G3DSA:1.25.40.10 183 256 5.2E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1397 4862bc3726c37c56d7d0b460f3b5b217 389 Pfam PF13432 Tetratricopeptide repeat 54 95 4.4E-6 T 12-10-2018 Acife_1397 4862bc3726c37c56d7d0b460f3b5b217 389 Gene3D G3DSA:1.25.40.10 44 177 1.0E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1397 4862bc3726c37c56d7d0b460f3b5b217 389 Pfam PF13174 Tetratricopeptide repeat 115 146 0.063 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_3177 2b8e53f54d04f595acca7a41147a5fbe 344 Gene3D G3DSA:2.60.120.580 152 256 1.5E-28 T 12-10-2018 Acife_3177 2b8e53f54d04f595acca7a41147a5fbe 344 Gene3D G3DSA:2.60.120.580 2 131 2.4E-11 T 12-10-2018 Acife_3177 2b8e53f54d04f595acca7a41147a5fbe 344 Gene3D G3DSA:3.10.28.20 259 338 4.5E-22 T 12-10-2018 Acife_3177 2b8e53f54d04f595acca7a41147a5fbe 344 SUPERFAMILY SSF141130 6 336 2.88E-83 T 12-10-2018 Acife_3177 2b8e53f54d04f595acca7a41147a5fbe 344 Pfam PF03069 Acetamidase/Formamidase family 189 336 6.8E-21 T 12-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 Acife_3177 2b8e53f54d04f595acca7a41147a5fbe 344 Pfam PF03069 Acetamidase/Formamidase family 68 183 8.9E-8 T 12-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 Acife_1703 53795bd3822d0d837e6424d292a1610a 363 Gene3D G3DSA:3.60.150.10 1 362 7.6E-156 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Acife_1703 53795bd3822d0d837e6424d292a1610a 363 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Acife_1703 53795bd3822d0d837e6424d292a1610a 363 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 8.4E-139 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Acife_1703 53795bd3822d0d837e6424d292a1610a 363 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Acife_1703 53795bd3822d0d837e6424d292a1610a 363 Pfam PF01264 Chorismate synthase 10 345 3.8E-142 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Acife_1703 53795bd3822d0d837e6424d292a1610a 363 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Acife_1703 53795bd3822d0d837e6424d292a1610a 363 SUPERFAMILY SSF103263 4 352 1.26E-144 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Acife_1703 53795bd3822d0d837e6424d292a1610a 363 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.194 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Acife_1703 53795bd3822d0d837e6424d292a1610a 363 PIRSF PIRSF001456 3 358 9.3E-141 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Acife_2491 fd84c2d08c50417574c55a99faa77f10 110 Gene3D G3DSA:2.60.40.10 4 110 2.1E-39 T 12-10-2018 IPR013783 Immunoglobulin-like fold Acife_2491 fd84c2d08c50417574c55a99faa77f10 110 Pfam PF08770 Sulphur oxidation protein SoxZ 15 105 5.2E-35 T 12-10-2018 IPR014880 Sulphur oxidation protein SoxZ Acife_2491 fd84c2d08c50417574c55a99faa77f10 110 SUPERFAMILY SSF81296 5 107 9.52E-33 T 12-10-2018 IPR014756 Immunoglobulin E-set Acife_2491 fd84c2d08c50417574c55a99faa77f10 110 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 11 107 1.8E-36 T 12-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ Acife_0185 75d4c3bc5126df32fd105762c8069984 479 SUPERFAMILY SSF50800 71 162 2.27E-25 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Acife_0185 75d4c3bc5126df32fd105762c8069984 479 SUPERFAMILY SSF51621 2 337 2.41E-91 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 Gene3D G3DSA:2.40.33.10 71 167 6.1E-160 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 470 5.2E-27 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 Pfam PF00224 Pyruvate kinase, barrel domain 2 337 1.4E-116 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 SUPERFAMILY SSF52935 321 473 1.83E-36 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 Gene3D G3DSA:3.20.20.60 3 333 6.1E-160 T 12-10-2018 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 PRINTS PR01050 Pyruvate kinase family signature 185 199 5.5E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 PRINTS PR01050 Pyruvate kinase family signature 215 241 5.5E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 PRINTS PR01050 Pyruvate kinase family signature 292 310 5.5E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 PRINTS PR01050 Pyruvate kinase family signature 311 327 5.5E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 PRINTS PR01050 Pyruvate kinase family signature 242 266 5.5E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 PRINTS PR01050 Pyruvate kinase family signature 60 76 5.5E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 PRINTS PR01050 Pyruvate kinase family signature 267 291 5.5E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 Gene3D G3DSA:3.40.1380.20 334 468 6.1E-160 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0185 75d4c3bc5126df32fd105762c8069984 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 472 3.6E-153 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_1116 22112a4df20aa4e9d93800c125b4868c 213 Gene3D G3DSA:3.40.50.1950 5 211 1.3E-79 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Acife_1116 22112a4df20aa4e9d93800c125b4868c 213 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 8 205 35.068 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Acife_1116 22112a4df20aa4e9d93800c125b4868c 213 Pfam PF02441 Flavoprotein 9 184 4.3E-26 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Acife_1116 22112a4df20aa4e9d93800c125b4868c 213 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 9 203 4.2E-62 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Acife_1116 22112a4df20aa4e9d93800c125b4868c 213 SUPERFAMILY SSF52507 9 205 5.36E-57 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Acife_3095 714dee100692c758da2f4fc90d0f6f5d 127 Pfam PF02261 Aspartate decarboxylase 4 115 4.2E-47 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Acife_3095 714dee100692c758da2f4fc90d0f6f5d 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 63.944 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Acife_3095 714dee100692c758da2f4fc90d0f6f5d 127 Gene3D G3DSA:2.40.40.20 2 127 2.1E-51 T 12-10-2018 Acife_3095 714dee100692c758da2f4fc90d0f6f5d 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 6 122 9.0E-38 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Acife_3095 714dee100692c758da2f4fc90d0f6f5d 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 4 122 3.1E-46 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Acife_3095 714dee100692c758da2f4fc90d0f6f5d 127 SUPERFAMILY SSF50692 3 120 1.86E-45 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Acife_3095 714dee100692c758da2f4fc90d0f6f5d 127 PIRSF PIRSF006246 2 126 7.8E-47 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 SUPERFAMILY SSF55124 527 632 3.76E-22 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PIRSF PIRSF037149 6 809 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 Gene3D G3DSA:3.50.50.60 123 247 2.1E-87 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2076 8a59b9af771fb962967d460caca7cb81 817 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 289 8.1E-49 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 14 801 6.8E-276 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 Gene3D G3DSA:3.50.50.60 15 297 2.1E-87 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2076 8a59b9af771fb962967d460caca7cb81 817 SUPERFAMILY SSF51905 9 196 1.3E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2076 8a59b9af771fb962967d460caca7cb81 817 Gene3D G3DSA:3.30.413.10 636 796 4.9E-40 T 12-10-2018 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 4.0E-11 T 12-10-2018 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 280 287 4.0E-11 T 12-10-2018 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 4.0E-11 T 12-10-2018 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 241 255 4.0E-11 T 12-10-2018 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 Pfam PF04324 BFD-like [2Fe-2S] binding domain 494 542 5.0E-11 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Acife_2076 8a59b9af771fb962967d460caca7cb81 817 Pfam PF04324 BFD-like [2Fe-2S] binding domain 429 477 3.5E-13 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Acife_2076 8a59b9af771fb962967d460caca7cb81 817 SUPERFAMILY SSF56014 639 801 1.7E-51 T 12-10-2018 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 685 701 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 SUPERFAMILY SSF51905 156 315 8.43E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2076 8a59b9af771fb962967d460caca7cb81 817 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 568 629 1.5E-12 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 2.4E-18 T 12-10-2018 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 2.4E-18 T 12-10-2018 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.4E-18 T 12-10-2018 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 2.4E-18 T 12-10-2018 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 256 2.4E-18 T 12-10-2018 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 638 772 4.0E-29 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PRINTS PR00397 Sirohaem Fe-binding site signature 642 660 5.2E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 PRINTS PR00397 Sirohaem Fe-binding site signature 685 703 5.2E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 Gene3D G3DSA:3.30.390.30 324 402 2.3E-5 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_2076 8a59b9af771fb962967d460caca7cb81 817 Gene3D G3DSA:1.10.10.1100 428 482 1.5E-9 T 12-10-2018 Acife_2073 147a5fa428d30950cc285b3f17bc5ddb 387 Pfam PF13379 NMT1-like family 4 260 7.5E-74 T 12-10-2018 Acife_2073 147a5fa428d30950cc285b3f17bc5ddb 387 Gene3D G3DSA:3.40.190.10 93 213 1.1E-119 T 12-10-2018 Acife_2073 147a5fa428d30950cc285b3f17bc5ddb 387 SUPERFAMILY SSF53850 6 249 8.87E-23 T 12-10-2018 Acife_2073 147a5fa428d30950cc285b3f17bc5ddb 387 Gene3D G3DSA:3.40.190.10 9 348 1.1E-119 T 12-10-2018 Acife_2300 d9c30227c55b7c93cb6602f6f755436e 408 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 118 326 6.6E-42 T 12-10-2018 IPR000477 Reverse transcriptase domain Acife_2300 d9c30227c55b7c93cb6602f6f755436e 408 Pfam PF08388 Group II intron, maturase-specific domain 340 397 2.0E-10 T 12-10-2018 IPR013597 Group II intron, maturase-specific Acife_2300 d9c30227c55b7c93cb6602f6f755436e 408 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 62 397 1.8E-110 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase Acife_2300 d9c30227c55b7c93cb6602f6f755436e 408 SUPERFAMILY SSF56672 72 391 1.67E-47 T 12-10-2018 Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 Gene3D G3DSA:3.40.50.300 130 311 6.7E-63 T 12-10-2018 Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 Gene3D G3DSA:1.10.10.60 390 444 1.9E-9 T 12-10-2018 Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 Pfam PF00072 Response regulator receiver domain 6 115 7.6E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 Gene3D G3DSA:1.10.8.60 312 389 2.4E-23 T 12-10-2018 Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 Pfam PF00158 Sigma-54 interaction domain 142 307 2.3E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 SUPERFAMILY SSF52172 1 185 2.85E-41 T 12-10-2018 IPR011006 CheY-like superfamily Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 SUPERFAMILY SSF52540 142 382 3.02E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 SUPERFAMILY SSF46689 354 442 6.72E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 Gene3D G3DSA:3.40.50.2300 1 129 4.2E-35 T 12-10-2018 Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 SMART SM00448 4 115 7.6E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_2890 a676be83efa0600e6af6ca1b45e05773 459 SMART SM00382 161 304 2.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 TIGRFAM TIGR01068 thioredoxin: thioredoxin 15 111 3.6E-29 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 Pfam PF00085 Thioredoxin 7 110 4.4E-28 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 Gene3D G3DSA:3.40.30.10 3 114 2.6E-32 T 12-10-2018 Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 PRINTS PR00421 Thioredoxin family signature 36 45 6.2E-6 T 12-10-2018 Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 PRINTS PR00421 Thioredoxin family signature 76 87 6.2E-6 T 12-10-2018 Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 PRINTS PR00421 Thioredoxin family signature 28 36 6.2E-6 T 12-10-2018 Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 Gene3D G3DSA:1.25.40.10 200 289 6.4E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 SUPERFAMILY SSF48452 119 258 1.96E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 Pfam PF14559 Tetratricopeptide repeat 126 193 8.6E-11 T 12-10-2018 Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 SUPERFAMILY SSF52833 4 113 3.83E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 Gene3D G3DSA:1.25.40.10 115 199 6.1E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0297 6a335c29330755ecfe407e382d8bacfc 289 Pfam PF14561 Tetratricopeptide repeat 200 289 8.4E-22 T 12-10-2018 Acife_2822 58397236f44814657f31e9ac900c36ed 308 Pfam PF01820 D-ala D-ala ligase N-terminus 6 89 5.7E-19 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2822 58397236f44814657f31e9ac900c36ed 308 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 302 33.303 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2822 58397236f44814657f31e9ac900c36ed 308 SUPERFAMILY SSF56059 99 297 4.95E-52 T 12-10-2018 Acife_2822 58397236f44814657f31e9ac900c36ed 308 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 301 6.5E-92 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2822 58397236f44814657f31e9ac900c36ed 308 Gene3D G3DSA:3.30.470.20 88 297 8.3E-69 T 12-10-2018 Acife_2822 58397236f44814657f31e9ac900c36ed 308 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2822 58397236f44814657f31e9ac900c36ed 308 Gene3D G3DSA:3.30.1490.20 114 179 8.3E-69 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Acife_2822 58397236f44814657f31e9ac900c36ed 308 Pfam PF07478 D-ala D-ala ligase C-terminus 106 298 1.3E-47 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2822 58397236f44814657f31e9ac900c36ed 308 PIRSF PIRSF039102 45 308 8.1E-80 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2822 58397236f44814657f31e9ac900c36ed 308 PIRSF PIRSF039102 3 55 5.3E-8 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2822 58397236f44814657f31e9ac900c36ed 308 SUPERFAMILY SSF52440 6 99 3.17E-27 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Acife_2822 58397236f44814657f31e9ac900c36ed 308 Gene3D G3DSA:3.40.50.20 1 87 7.0E-26 T 12-10-2018 Acife_2822 58397236f44814657f31e9ac900c36ed 308 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 244 272 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2019 20bdf960e90c57283b4772b3d9f54963 102 Pfam PF00113 Enolase, C-terminal TIM barrel domain 71 100 7.1E-7 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_2019 20bdf960e90c57283b4772b3d9f54963 102 SUPERFAMILY SSF51604 72 100 2.75E-6 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Acife_2019 20bdf960e90c57283b4772b3d9f54963 102 SUPERFAMILY SSF51621 6 70 4.87E-14 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Acife_2019 20bdf960e90c57283b4772b3d9f54963 102 Pfam PF00224 Pyruvate kinase, barrel domain 7 58 5.1E-15 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_2019 20bdf960e90c57283b4772b3d9f54963 102 Gene3D G3DSA:3.20.20.60 8 58 1.1E-16 T 12-10-2018 Acife_2019 20bdf960e90c57283b4772b3d9f54963 102 Gene3D G3DSA:3.20.20.120 71 102 1.2E-5 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Acife_1773 d53e1ce9ba896b425ec540ac5bb32f2c 255 SUPERFAMILY SSF75217 87 242 1.57E-46 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Acife_1773 d53e1ce9ba896b425ec540ac5bb32f2c 255 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 240 6.8E-69 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Acife_1773 d53e1ce9ba896b425ec540ac5bb32f2c 255 SMART SM00967 5 80 1.6E-7 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Acife_1773 d53e1ce9ba896b425ec540ac5bb32f2c 255 Gene3D G3DSA:3.30.1330.30 1 74 8.1E-12 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Acife_1773 d53e1ce9ba896b425ec540ac5bb32f2c 255 SUPERFAMILY SSF55315 4 70 3.3E-10 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Acife_1773 d53e1ce9ba896b425ec540ac5bb32f2c 255 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 71 4.5E-9 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Acife_1773 d53e1ce9ba896b425ec540ac5bb32f2c 255 Pfam PF00588 SpoU rRNA Methylase family 95 234 5.8E-38 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Acife_1773 d53e1ce9ba896b425ec540ac5bb32f2c 255 Gene3D G3DSA:3.40.1280.10 75 241 7.5E-59 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 SUPERFAMILY SSF48295 347 449 1.02E-36 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 14 450 32.43 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 Gene3D G3DSA:3.40.50.300 111 280 9.5E-51 T 12-10-2018 Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 361 428 7.9E-32 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 Gene3D G3DSA:1.10.8.60 282 352 2.0E-23 T 12-10-2018 Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 17 448 4.3E-174 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 Gene3D G3DSA:3.30.300.180 14 110 2.7E-19 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 ProSitePatterns PS01008 DnaA protein signature. 409 428 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 Pfam PF00308 Bacterial dnaA protein 116 332 2.5E-92 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 149 169 1.9E-51 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 247 274 1.9E-51 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 409 428 1.9E-51 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 181 195 1.9E-51 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 213 227 1.9E-51 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 Pfam PF11638 DnaA N-terminal domain 15 74 1.4E-14 T 12-10-2018 IPR024633 DnaA N-terminal domain Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 SUPERFAMILY SSF52540 115 327 3.01E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 SMART SM00760 359 428 1.2E-41 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 SMART SM00382 148 361 1.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0001 b733e925aaf7998b90af27a0702d9eab 451 Gene3D G3DSA:1.10.1750.10 358 451 5.7E-36 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Acife_3171 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Gene3D G3DSA:3.30.420.10 117 265 1.4E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_3171 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Pfam PF00665 Integrase core domain 122 232 1.0E-27 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_3171 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Pfam PF13276 HTH-like domain 43 95 3.7E-14 T 12-10-2018 IPR025948 HTH-like domain Acife_3171 376a28f7eec3c6a8fbb7acbe2d073ea7 294 SUPERFAMILY SSF53098 121 277 7.97E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_3166 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Gene3D G3DSA:3.30.420.10 117 265 1.4E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_3166 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Pfam PF00665 Integrase core domain 122 232 1.0E-27 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_3166 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Pfam PF13276 HTH-like domain 43 95 3.7E-14 T 12-10-2018 IPR025948 HTH-like domain Acife_3166 376a28f7eec3c6a8fbb7acbe2d073ea7 294 SUPERFAMILY SSF53098 121 277 7.97E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0764 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Gene3D G3DSA:3.30.420.10 117 265 1.4E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_0764 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Pfam PF00665 Integrase core domain 122 232 1.0E-27 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_0764 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Pfam PF13276 HTH-like domain 43 95 3.7E-14 T 12-10-2018 IPR025948 HTH-like domain Acife_0764 376a28f7eec3c6a8fbb7acbe2d073ea7 294 SUPERFAMILY SSF53098 121 277 7.97E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0860 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Gene3D G3DSA:3.30.420.10 117 265 1.4E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_0860 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Pfam PF00665 Integrase core domain 122 232 1.0E-27 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_0860 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Pfam PF13276 HTH-like domain 43 95 3.7E-14 T 12-10-2018 IPR025948 HTH-like domain Acife_0860 376a28f7eec3c6a8fbb7acbe2d073ea7 294 SUPERFAMILY SSF53098 121 277 7.97E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0396 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Gene3D G3DSA:3.30.420.10 117 265 1.4E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_0396 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Pfam PF00665 Integrase core domain 122 232 1.0E-27 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_0396 376a28f7eec3c6a8fbb7acbe2d073ea7 294 Pfam PF13276 HTH-like domain 43 95 3.7E-14 T 12-10-2018 IPR025948 HTH-like domain Acife_0396 376a28f7eec3c6a8fbb7acbe2d073ea7 294 SUPERFAMILY SSF53098 121 277 7.97E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 SUPERFAMILY SSF55785 672 776 7.15E-12 T 12-10-2018 IPR035965 PAS domain superfamily Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 SUPERFAMILY SSF55781 484 642 2.18E-19 T 12-10-2018 Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 SUPERFAMILY SSF55073 785 943 2.59E-43 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 SMART SM00052 949 1192 7.4E-51 T 12-10-2018 IPR001633 EAL domain Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 Gene3D G3DSA:3.30.450.40 289 480 1.1E-12 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 Gene3D G3DSA:3.30.450.40 482 653 3.0E-20 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 Gene3D G3DSA:3.30.450.20 655 770 9.9E-14 T 12-10-2018 Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 776 940 3.3E-42 T 12-10-2018 IPR000160 GGDEF domain Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 SUPERFAMILY SSF141868 955 1203 7.72E-61 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 691 774 8.9E-6 T 12-10-2018 IPR000014 PAS domain Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 SUPERFAMILY SSF55781 295 474 1.05E-9 T 12-10-2018 Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 Gene3D G3DSA:3.20.20.450 953 1204 6.9E-65 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 Pfam PF13185 GAF domain 497 639 1.2E-18 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 Pfam PF13426 PAS domain 674 768 1.9E-6 T 12-10-2018 IPR000014 PAS domain Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 Gene3D G3DSA:3.30.70.270 771 944 5.1E-50 T 12-10-2018 Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 Pfam PF00563 EAL domain 955 1187 2.6E-52 T 12-10-2018 IPR001633 EAL domain Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 Gene3D G3DSA:3.30.450.20 39 185 5.2E-7 T 12-10-2018 Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 SMART SM00065 497 649 0.0095 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 SMART SM00267 769 943 2.8E-59 T 12-10-2018 IPR000160 GGDEF domain Acife_0087 7fed3880790c19ddbbc2ab6807914d70 1310 Pfam PF00990 Diguanylate cyclase, GGDEF domain 780 938 4.1E-44 T 12-10-2018 IPR000160 GGDEF domain Acife_2319 9ead19193696df350be87625872c612e 567 SUPERFAMILY SSF53098 367 509 1.74E-10 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_2319 9ead19193696df350be87625872c612e 567 Pfam PF01609 Transposase DDE domain 224 496 3.2E-13 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 Gene3D G3DSA:3.40.120.10 189 290 9.9E-37 T 12-10-2018 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 294 405 1.1E-30 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 151 1.5E-32 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 SUPERFAMILY SSF55957 409 543 9.16E-41 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 205 224 1.7E-21 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 106 120 1.7E-21 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 241 254 1.7E-21 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 270 285 1.7E-21 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 Gene3D G3DSA:3.40.120.10 2 188 5.2E-77 T 12-10-2018 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 184 286 1.6E-10 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 SUPERFAMILY SSF53738 278 414 3.57E-37 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 Gene3D G3DSA:3.30.310.50 389 543 4.0E-51 T 12-10-2018 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 SUPERFAMILY SSF53738 183 291 1.45E-28 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 SUPERFAMILY SSF53738 5 212 4.32E-45 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1053 e9880c60f8208edcdffc67301665ca79 543 Gene3D G3DSA:3.40.120.10 291 388 1.5E-38 T 12-10-2018 Acife_2641 b4afed5b7636fac67731d9632ed7e256 241 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 4 239 5.2E-82 T 12-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_2641 b4afed5b7636fac67731d9632ed7e256 241 SUPERFAMILY SSF53098 3 174 3.62E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_2641 b4afed5b7636fac67731d9632ed7e256 241 Pfam PF00929 Exonuclease 6 164 4.1E-32 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Acife_2641 b4afed5b7636fac67731d9632ed7e256 241 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 190 7.8E-57 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_2641 b4afed5b7636fac67731d9632ed7e256 241 Gene3D G3DSA:3.30.420.10 2 176 1.3E-50 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_2641 b4afed5b7636fac67731d9632ed7e256 241 SMART SM00479 4 173 4.0E-41 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Acife_2867 b7e7ac14002721c37556ba02d9a2e6c1 200 Gene3D G3DSA:1.20.1050.10 79 191 4.6E-56 T 12-10-2018 Acife_2867 b7e7ac14002721c37556ba02d9a2e6c1 200 SUPERFAMILY SSF47616 75 199 5.51E-10 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Acife_2867 b7e7ac14002721c37556ba02d9a2e6c1 200 SUPERFAMILY SSF52833 1 99 5.83E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2867 b7e7ac14002721c37556ba02d9a2e6c1 200 Gene3D G3DSA:3.40.30.10 2 192 4.6E-56 T 12-10-2018 Acife_2867 b7e7ac14002721c37556ba02d9a2e6c1 200 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 77 9.8E-22 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Acife_2550 1847c5e23b1f203234ca47f77b3550a1 163 Gene3D G3DSA:3.40.30.10 74 162 2.1E-29 T 12-10-2018 Acife_2550 1847c5e23b1f203234ca47f77b3550a1 163 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2550 1847c5e23b1f203234ca47f77b3550a1 163 PIRSF PIRSF000216 1 162 1.4E-61 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2550 1847c5e23b1f203234ca47f77b3550a1 163 Gene3D G3DSA:1.10.10.1590 2 73 8.7E-23 T 12-10-2018 Acife_2550 1847c5e23b1f203234ca47f77b3550a1 163 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 15 155 4.9E-55 T 12-10-2018 Acife_2550 1847c5e23b1f203234ca47f77b3550a1 163 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 10 155 2.2E-59 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2550 1847c5e23b1f203234ca47f77b3550a1 163 SUPERFAMILY SSF52833 3 158 1.12E-54 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2833 f97ca0f5d007c37c3c4f660b38b17074 80 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 42 59 1.9E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_2833 f97ca0f5d007c37c3c4f660b38b17074 80 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 59 79 1.9E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_2833 f97ca0f5d007c37c3c4f660b38b17074 80 Pfam PF02954 Bacterial regulatory protein, Fis family 36 76 1.5E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_2833 f97ca0f5d007c37c3c4f660b38b17074 80 Gene3D G3DSA:1.10.10.60 1 79 2.6E-21 T 12-10-2018 Acife_2833 f97ca0f5d007c37c3c4f660b38b17074 80 PIRSF PIRSF002097 1 79 6.8E-23 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Acife_2833 f97ca0f5d007c37c3c4f660b38b17074 80 SUPERFAMILY SSF46689 5 79 3.58E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 SUPERFAMILY SSF56784 506 809 2.0E-54 T 12-10-2018 IPR036412 HAD-like superfamily Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 Gene3D G3DSA:2.70.150.20 300 412 8.2E-39 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 SUPERFAMILY SSF55008 77 146 2.09E-20 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 Pfam PF00702 haloacid dehalogenase-like hydrolase 503 717 7.5E-49 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 Pfam PF00122 E1-E2 ATPase 307 486 1.1E-51 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 ProSitePatterns PS01047 Heavy-metal-associated domain. 13 42 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 221 812 5.7E-176 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00943 Copper-transporting ATPase signature 224 243 1.8E-15 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00943 Copper-transporting ATPase signature 91 105 1.8E-15 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.8E-15 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00943 Copper-transporting ATPase signature 430 444 1.8E-15 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00943 Copper-transporting ATPase signature 490 505 1.8E-15 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00943 Copper-transporting ATPase signature 680 697 1.8E-15 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00943 Copper-transporting ATPase signature 776 790 1.8E-15 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 357 371 3.4E-26 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 650 660 3.4E-26 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 3.4E-26 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 703 722 3.4E-26 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 726 738 3.4E-26 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 639 3.4E-26 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 Gene3D G3DSA:3.40.50.1000 488 755 2.6E-93 T 12-10-2018 IPR023214 HAD superfamily Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 SUPERFAMILY SSF55008 9 73 2.62E-21 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 239 811 9.5E-186 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00942 Copper-transporting ATPase 1 signature 34 57 2.7E-8 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00942 Copper-transporting ATPase 1 signature 222 247 2.7E-8 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00942 Copper-transporting ATPase 1 signature 8 33 2.7E-8 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 PRINTS PR00942 Copper-transporting ATPase 1 signature 63 83 2.7E-8 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 10 71 6.6E-14 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 77 140 1.4E-9 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 Gene3D G3DSA:3.40.1110.10 518 635 2.6E-93 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 SUPERFAMILY SSF81665 272 776 4.32E-15 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 SUPERFAMILY SSF81653 314 407 2.62E-26 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 Pfam PF00403 Heavy-metal-associated domain 81 138 2.1E-12 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 Pfam PF00403 Heavy-metal-associated domain 13 71 5.1E-17 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 ProSitePatterns PS01047 Heavy-metal-associated domain. 81 110 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 Gene3D G3DSA:3.30.70.100 74 152 3.8E-21 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 ProSitePatterns PS01229 Hypothetical cof family signature 2. 703 725 - T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 Gene3D G3DSA:3.30.70.100 7 73 1.5E-22 T 12-10-2018 Acife_0695 1a515116e63ddcdc7cf2188ca3f3aa5c 836 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 782 2.1E-92 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0218 62bce300e30680c96232c13f1451c60a 420 SUPERFAMILY SSF47384 202 276 3.53E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_0218 62bce300e30680c96232c13f1451c60a 420 SUPERFAMILY SSF55874 285 417 3.01E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0218 62bce300e30680c96232c13f1451c60a 420 SMART SM00387 315 420 1.6E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0218 62bce300e30680c96232c13f1451c60a 420 SMART SM00388 219 278 2.6E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_0218 62bce300e30680c96232c13f1451c60a 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 418 6.5E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0218 62bce300e30680c96232c13f1451c60a 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 3.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0218 62bce300e30680c96232c13f1451c60a 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 417 3.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0218 62bce300e30680c96232c13f1451c60a 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 3.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0218 62bce300e30680c96232c13f1451c60a 420 Gene3D G3DSA:1.10.287.130 163 273 1.1E-20 T 12-10-2018 Acife_0218 62bce300e30680c96232c13f1451c60a 420 SUPERFAMILY SSF158472 166 216 1.03E-5 T 12-10-2018 Acife_0218 62bce300e30680c96232c13f1451c60a 420 Gene3D G3DSA:3.30.565.10 296 420 2.7E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0218 62bce300e30680c96232c13f1451c60a 420 Pfam PF00672 HAMP domain 166 215 1.9E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_0218 62bce300e30680c96232c13f1451c60a 420 SMART SM00304 166 218 3.4E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_0218 62bce300e30680c96232c13f1451c60a 420 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 277 1.4E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2745 f062eb3827641dc06d218f2de2a42160 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 6.4E-38 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2745 f062eb3827641dc06d218f2de2a42160 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.751 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2745 f062eb3827641dc06d218f2de2a42160 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 3.5E-40 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2745 f062eb3827641dc06d218f2de2a42160 103 SUPERFAMILY SSF141091 1 101 1.24E-37 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2745 f062eb3827641dc06d218f2de2a42160 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 Pfam PF13932 GidA associated domain 399 612 8.2E-71 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 Gene3D G3DSA:1.10.10.1800 456 546 1.0E-19 T 12-10-2018 Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 SMART SM01228 542 613 2.5E-37 T 12-10-2018 Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 617 3.4E-261 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 Gene3D G3DSA:3.50.50.60 1 220 8.7E-88 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 Gene3D G3DSA:3.50.50.60 291 455 6.0E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 620 41.524 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 Gene3D G3DSA:1.10.150.570 565 618 1.2E-21 T 12-10-2018 Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 SUPERFAMILY SSF51905 4 258 5.25E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 Pfam PF01134 Glucose inhibited division protein A 6 394 1.6E-161 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Acife_3201 15bc20ef97d34e10aa684f7cebe27ceb 624 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Acife_3241 7196bd923f55c7c94e69d7e1151b93d1 98 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 44 1.4E-10 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Acife_3241 7196bd923f55c7c94e69d7e1151b93d1 98 SUPERFAMILY SSF143120 4 44 3.27E-9 T 12-10-2018 IPR036165 YefM-like superfamily Acife_3241 7196bd923f55c7c94e69d7e1151b93d1 98 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 44 8.6E-11 T 12-10-2018 Acife_3241 7196bd923f55c7c94e69d7e1151b93d1 98 Gene3D G3DSA:3.40.1620.10 2 41 7.0E-7 T 12-10-2018 Acife_0209 3047288f3d60dc5e54843634b1fb8295 107 Gene3D G3DSA:3.40.1620.10 5 51 5.0E-8 T 12-10-2018 Acife_0209 3047288f3d60dc5e54843634b1fb8295 107 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 20 60 7.9E-11 T 12-10-2018 Acife_0209 3047288f3d60dc5e54843634b1fb8295 107 SUPERFAMILY SSF143120 16 68 4.05E-10 T 12-10-2018 IPR036165 YefM-like superfamily Acife_0209 3047288f3d60dc5e54843634b1fb8295 107 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 17 61 1.5E-10 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Acife_1372 6ac520557618a632794d65f911072515 613 SUPERFAMILY SSF52540 350 596 9.25E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1372 6ac520557618a632794d65f911072515 613 Gene3D G3DSA:3.40.50.300 350 604 1.2E-82 T 12-10-2018 Acife_1372 6ac520557618a632794d65f911072515 613 SUPERFAMILY SSF90123 19 335 4.45E-63 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Acife_1372 6ac520557618a632794d65f911072515 613 SMART SM00382 386 572 9.7E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1372 6ac520557618a632794d65f911072515 613 Gene3D G3DSA:1.20.1560.10 4 333 2.0E-63 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Acife_1372 6ac520557618a632794d65f911072515 613 Pfam PF00664 ABC transporter transmembrane region 31 294 4.4E-44 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Acife_1372 6ac520557618a632794d65f911072515 613 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_1372 6ac520557618a632794d65f911072515 613 Pfam PF00005 ABC transporter 379 526 1.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_0663 1d2f53ca4ebecf4b3c6d3aa35edd748d 148 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 18 112 2.5E-14 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Acife_0663 1d2f53ca4ebecf4b3c6d3aa35edd748d 148 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 17 142 9.2E-40 T 12-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 Acife_0663 1d2f53ca4ebecf4b3c6d3aa35edd748d 148 Gene3D G3DSA:3.40.140.10 7 145 6.8E-44 T 12-10-2018 Acife_0663 1d2f53ca4ebecf4b3c6d3aa35edd748d 148 SUPERFAMILY SSF53927 16 143 7.86E-39 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Acife_1101 d20e200fda58af834cf791c66690339d 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 5.1E-35 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Acife_1101 d20e200fda58af834cf791c66690339d 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Acife_1101 d20e200fda58af834cf791c66690339d 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.5E-22 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Acife_1101 d20e200fda58af834cf791c66690339d 107 Gene3D G3DSA:2.60.300.12 2 107 8.5E-36 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Acife_1101 d20e200fda58af834cf791c66690339d 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 106 6.7E-51 T 12-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 Acife_1101 d20e200fda58af834cf791c66690339d 107 SUPERFAMILY SSF89360 1 96 7.85E-32 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Acife_2395 07c2221e4f1c72af6d28f99f69e51dbe 508 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 11 493 1.8E-129 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Acife_2395 07c2221e4f1c72af6d28f99f69e51dbe 508 Pfam PF07690 Major Facilitator Superfamily 16 409 5.2E-58 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_2395 07c2221e4f1c72af6d28f99f69e51dbe 508 SUPERFAMILY SSF103473 6 495 2.22E-63 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_2395 07c2221e4f1c72af6d28f99f69e51dbe 508 Gene3D G3DSA:1.20.1720.10 12 219 4.9E-49 T 12-10-2018 Acife_2395 07c2221e4f1c72af6d28f99f69e51dbe 508 Gene3D G3DSA:1.20.1250.20 258 436 6.2E-16 T 12-10-2018 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 SUPERFAMILY SSF88723 5 166 1.25E-50 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 Gene3D G3DSA:3.30.420.10 296 511 1.7E-64 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 SMART SM00474 299 487 2.5E-26 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 SMART SM00482 656 862 3.0E-115 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 Pfam PF00476 DNA polymerase family A 522 896 1.4E-150 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 Gene3D G3DSA:3.40.50.1010 7 271 6.1E-88 T 12-10-2018 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 SMART SM00475 1 257 8.7E-105 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 166 5.8E-49 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 Gene3D G3DSA:3.30.70.370 634 894 1.6E-109 T 12-10-2018 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 TIGRFAM TIGR00593 pola: DNA polymerase I 7 898 1.8E-274 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 Pfam PF01612 3'-5' exonuclease 301 485 5.7E-33 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 167 250 1.1E-25 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 SUPERFAMILY SSF47807 167 278 3.44E-31 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 SMART SM00279 169 204 3.8E-11 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 SUPERFAMILY SSF53098 298 486 2.28E-46 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 Gene3D G3DSA:1.20.1060.10 513 628 1.6E-39 T 12-10-2018 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 Gene3D G3DSA:1.10.150.20 170 242 6.1E-88 T 12-10-2018 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 SUPERFAMILY SSF56672 492 898 2.22E-151 T 12-10-2018 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 PRINTS PR00868 DNA-polymerase family A (pol I) signature 761 772 2.0E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 831 2.0E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 713 2.0E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 858 2.0E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 663 2.0E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 PRINTS PR00868 DNA-polymerase family A (pol I) signature 783 794 2.0E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 PRINTS PR00868 DNA-polymerase family A (pol I) signature 724 749 2.0E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 PRINTS PR00868 DNA-polymerase family A (pol I) signature 670 693 2.0E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 PRINTS PR00868 DNA-polymerase family A (pol I) signature 625 647 2.0E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3099 dcb4d9e70c711abfed83f8e93440dc33 899 Gene3D G3DSA:1.10.150.20 679 822 1.6E-109 T 12-10-2018 Acife_2136 ff02095ad784f0a6e265ec81586fc8a3 224 Gene3D G3DSA:3.40.50.2300 1 120 5.3E-34 T 12-10-2018 Acife_2136 ff02095ad784f0a6e265ec81586fc8a3 224 SMART SM00448 1 112 1.8E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_2136 ff02095ad784f0a6e265ec81586fc8a3 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 7.1E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_2136 ff02095ad784f0a6e265ec81586fc8a3 224 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 2.5E-91 T 12-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 Acife_2136 ff02095ad784f0a6e265ec81586fc8a3 224 SUPERFAMILY SSF52172 1 175 1.23E-36 T 12-10-2018 IPR011006 CheY-like superfamily Acife_2136 ff02095ad784f0a6e265ec81586fc8a3 224 SMART SM00862 145 220 1.6E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_2136 ff02095ad784f0a6e265ec81586fc8a3 224 Pfam PF00072 Response regulator receiver domain 3 113 5.9E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_2136 ff02095ad784f0a6e265ec81586fc8a3 224 Gene3D G3DSA:1.10.10.10 123 224 3.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2696 5f57a4f0ec80a84c60e5cd3c131339ce 131 Gene3D G3DSA:3.30.1370.30 4 75 1.2E-26 T 12-10-2018 Acife_2696 5f57a4f0ec80a84c60e5cd3c131339ce 131 Pfam PF00410 Ribosomal protein S8 5 130 1.5E-46 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2696 5f57a4f0ec80a84c60e5cd3c131339ce 131 Gene3D G3DSA:3.30.1490.10 76 130 4.7E-24 T 12-10-2018 Acife_2696 5f57a4f0ec80a84c60e5cd3c131339ce 131 SUPERFAMILY SSF56047 3 130 1.96E-43 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2696 5f57a4f0ec80a84c60e5cd3c131339ce 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2696 5f57a4f0ec80a84c60e5cd3c131339ce 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 30.804 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2808 be1e73a4151529767e768b4d37ad92ca 456 SUPERFAMILY SSF81891 133 431 2.88E-36 T 12-10-2018 Acife_2808 be1e73a4151529767e768b4d37ad92ca 456 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 160 220 1.1E-8 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Acife_2808 be1e73a4151529767e768b4d37ad92ca 456 Pfam PF01743 Poly A polymerase head domain 100 135 6.1E-7 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Acife_2808 be1e73a4151529767e768b4d37ad92ca 456 Gene3D G3DSA:1.10.3090.10 135 425 8.4E-36 T 12-10-2018 Acife_2808 be1e73a4151529767e768b4d37ad92ca 456 SUPERFAMILY SSF81301 8 132 1.2E-16 T 12-10-2018 Acife_2808 be1e73a4151529767e768b4d37ad92ca 456 Gene3D G3DSA:3.30.460.10 6 134 1.2E-16 T 12-10-2018 Acife_0240 ec04b521a4dbbda3d3e3b39db857816f 475 SUPERFAMILY SSF111352 9 421 4.58E-101 T 12-10-2018 Acife_0240 ec04b521a4dbbda3d3e3b39db857816f 475 ProSitePatterns PS01219 Ammonium transporters signature. 182 207 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Acife_0240 ec04b521a4dbbda3d3e3b39db857816f 475 Gene3D G3DSA:1.10.3430.10 2 443 2.8E-116 T 12-10-2018 IPR029020 Ammonium/urea transporter Acife_0240 ec04b521a4dbbda3d3e3b39db857816f 475 Pfam PF00909 Ammonium Transporter Family 15 430 2.0E-87 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Acife_0240 ec04b521a4dbbda3d3e3b39db857816f 475 TIGRFAM TIGR00836 amt: ammonium transporter 13 436 4.4E-111 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Acife_0240 ec04b521a4dbbda3d3e3b39db857816f 475 PRINTS PR00342 Rhesus blood group protein signature 221 239 1.5E-6 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Acife_0240 ec04b521a4dbbda3d3e3b39db857816f 475 PRINTS PR00342 Rhesus blood group protein signature 307 325 1.5E-6 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Acife_0240 ec04b521a4dbbda3d3e3b39db857816f 475 PRINTS PR00342 Rhesus blood group protein signature 126 142 1.5E-6 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Acife_0240 ec04b521a4dbbda3d3e3b39db857816f 475 PRINTS PR00342 Rhesus blood group protein signature 252 274 1.5E-6 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Acife_0962 61ede987b06ff4595d1d7c53516f85e3 478 Gene3D G3DSA:3.30.750.44 52 346 9.5E-93 T 12-10-2018 Acife_0962 61ede987b06ff4595d1d7c53516f85e3 478 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 58 384 1.2E-97 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Acife_0962 61ede987b06ff4595d1d7c53516f85e3 478 Pfam PF13180 PDZ domain 106 182 1.3E-11 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_0962 61ede987b06ff4595d1d7c53516f85e3 478 SMART SM00228 106 177 4.0E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_0962 61ede987b06ff4595d1d7c53516f85e3 478 Pfam PF03572 Peptidase family S41 205 370 6.9E-52 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Acife_0962 61ede987b06ff4595d1d7c53516f85e3 478 SMART SM00245 179 371 8.5E-66 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Acife_0962 61ede987b06ff4595d1d7c53516f85e3 478 SUPERFAMILY SSF52096 37 375 3.81E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Acife_0962 61ede987b06ff4595d1d7c53516f85e3 478 SUPERFAMILY SSF50156 94 190 2.27E-19 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Acife_0962 61ede987b06ff4595d1d7c53516f85e3 478 Gene3D G3DSA:3.90.226.10 194 368 9.5E-93 T 12-10-2018 Acife_0962 61ede987b06ff4595d1d7c53516f85e3 478 Gene3D G3DSA:2.30.42.10 106 193 9.5E-93 T 12-10-2018 Acife_1830 6470341c983c4527fab4f4631b89994d 878 SUPERFAMILY SSF101353 245 445 2.35E-60 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Acife_1830 6470341c983c4527fab4f4631b89994d 878 SUPERFAMILY SSF50447 454 553 4.24E-17 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_1830 6470341c983c4527fab4f4631b89994d 878 Pfam PF01411 tRNA synthetases class II (A) 6 555 3.7E-230 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Acife_1830 6470341c983c4527fab4f4631b89994d 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 198 209 1.0E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Acife_1830 6470341c983c4527fab4f4631b89994d 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 299 312 1.0E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Acife_1830 6470341c983c4527fab4f4631b89994d 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 225 238 1.0E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Acife_1830 6470341c983c4527fab4f4631b89994d 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.0E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Acife_1830 6470341c983c4527fab4f4631b89994d 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 275 291 1.0E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Acife_1830 6470341c983c4527fab4f4631b89994d 878 Gene3D G3DSA:3.30.930.10 1 241 3.7E-113 T 12-10-2018 Acife_1830 6470341c983c4527fab4f4631b89994d 878 SUPERFAMILY SSF55186 553 712 5.36E-49 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Acife_1830 6470341c983c4527fab4f4631b89994d 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 697 6.0E-18 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Acife_1830 6470341c983c4527fab4f4631b89994d 878 Gene3D G3DSA:3.30.54.20 625 678 1.4E-48 T 12-10-2018 Acife_1830 6470341c983c4527fab4f4631b89994d 878 Pfam PF02272 DHHA1 domain 734 873 6.1E-26 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Acife_1830 6470341c983c4527fab4f4631b89994d 878 SUPERFAMILY SSF55681 3 244 1.82E-110 T 12-10-2018 Acife_1830 6470341c983c4527fab4f4631b89994d 878 Gene3D G3DSA:2.40.30.130 479 553 9.8E-9 T 12-10-2018 Acife_1830 6470341c983c4527fab4f4631b89994d 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 877 199.098 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Acife_1830 6470341c983c4527fab4f4631b89994d 878 Gene3D G3DSA:3.10.310.40 764 875 1.3E-28 T 12-10-2018 Acife_1830 6470341c983c4527fab4f4631b89994d 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 855 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Acife_1830 6470341c983c4527fab4f4631b89994d 878 Gene3D G3DSA:3.30.980.10 558 696 1.4E-48 T 12-10-2018 Acife_1830 6470341c983c4527fab4f4631b89994d 878 SMART SM00863 654 697 1.0E-21 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 SUPERFAMILY SSF55073 214 372 1.41E-54 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 Pfam PF00072 Response regulator receiver domain 13 122 8.8E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 SMART SM00052 380 626 2.0E-117 T 12-10-2018 IPR001633 EAL domain Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 SUPERFAMILY SSF52172 11 165 3.27E-31 T 12-10-2018 IPR011006 CheY-like superfamily Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 Pfam PF00990 Diguanylate cyclase, GGDEF domain 209 365 1.2E-52 T 12-10-2018 IPR000160 GGDEF domain Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 SMART SM00267 198 370 2.8E-65 T 12-10-2018 IPR000160 GGDEF domain Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 Gene3D G3DSA:3.30.70.270 203 383 7.3E-64 T 12-10-2018 Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 SMART SM00448 10 122 5.4E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 Gene3D G3DSA:3.20.20.450 384 635 1.7E-102 T 12-10-2018 IPR035919 EAL domain superfamily Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 SUPERFAMILY SSF141868 385 633 1.05E-90 T 12-10-2018 IPR035919 EAL domain superfamily Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 207 369 6.6E-45 T 12-10-2018 IPR000160 GGDEF domain Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 Gene3D G3DSA:3.40.50.2300 9 147 3.1E-29 T 12-10-2018 Acife_1337 027aa5bb7afcd5dd83c6bb3a228cf3b5 647 Pfam PF00563 EAL domain 387 621 1.7E-74 T 12-10-2018 IPR001633 EAL domain Acife_1058 d3d3a195a7aef3d84b3f6dff7917c3cf 190 Gene3D G3DSA:3.30.420.10 1 183 4.6E-67 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_1058 d3d3a195a7aef3d84b3f6dff7917c3cf 190 SUPERFAMILY SSF53098 5 178 7.05E-42 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_1058 d3d3a195a7aef3d84b3f6dff7917c3cf 190 Hamap MF_00045 Oligoribonuclease [orn]. 3 180 40.158 T 12-10-2018 IPR022894 Oligoribonuclease GO:0000175 Acife_1058 d3d3a195a7aef3d84b3f6dff7917c3cf 190 SMART SM00479 7 179 6.1E-19 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Acife_1058 d3d3a195a7aef3d84b3f6dff7917c3cf 190 Pfam PF00929 Exonuclease 9 168 2.6E-29 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Acife_2879 dd3555695ee8ae73b3f74975ddce4b30 333 Gene3D G3DSA:3.40.718.10 2 330 3.1E-121 T 12-10-2018 Acife_2879 dd3555695ee8ae73b3f74975ddce4b30 333 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 321 4.2E-105 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Acife_2879 dd3555695ee8ae73b3f74975ddce4b30 333 SUPERFAMILY SSF53659 5 328 4.0E-108 T 12-10-2018 Acife_2879 dd3555695ee8ae73b3f74975ddce4b30 333 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 3.7E-124 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Acife_2879 dd3555695ee8ae73b3f74975ddce4b30 333 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 328 35.248 T 12-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 Acife_1710 3f80347f60ddca374daf47945c1e3e72 333 Gene3D G3DSA:3.40.50.720 6 315 8.9E-94 T 12-10-2018 Acife_1710 3f80347f60ddca374daf47945c1e3e72 333 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 3.4E-27 T 12-10-2018 Acife_1710 3f80347f60ddca374daf47945c1e3e72 333 PRINTS PR01713 Nucleotide sugar epimerase signature 31 47 3.4E-27 T 12-10-2018 Acife_1710 3f80347f60ddca374daf47945c1e3e72 333 PRINTS PR01713 Nucleotide sugar epimerase signature 218 233 3.4E-27 T 12-10-2018 Acife_1710 3f80347f60ddca374daf47945c1e3e72 333 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 3.4E-27 T 12-10-2018 Acife_1710 3f80347f60ddca374daf47945c1e3e72 333 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 237 5.2E-56 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Acife_1710 3f80347f60ddca374daf47945c1e3e72 333 SUPERFAMILY SSF51735 1 332 1.14E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1710 3f80347f60ddca374daf47945c1e3e72 333 Gene3D G3DSA:3.90.25.10 182 327 8.9E-94 T 12-10-2018 Acife_2095 528c7d00d62af10511f6b20750020ec6 261 Pfam PF00230 Major intrinsic protein 31 237 6.7E-48 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_2095 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 156 174 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_2095 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 34 53 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_2095 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 187 209 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_2095 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 224 244 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_2095 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 110 129 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_2095 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 73 97 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_2095 528c7d00d62af10511f6b20750020ec6 261 Gene3D G3DSA:1.20.1080.10 25 252 5.0E-57 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Acife_2095 528c7d00d62af10511f6b20750020ec6 261 ProSitePatterns PS00221 MIP family signature. 91 99 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Acife_2095 528c7d00d62af10511f6b20750020ec6 261 SUPERFAMILY SSF81338 30 246 4.19E-55 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Acife_0602 528c7d00d62af10511f6b20750020ec6 261 Pfam PF00230 Major intrinsic protein 31 237 6.7E-48 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_0602 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 156 174 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_0602 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 34 53 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_0602 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 187 209 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_0602 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 224 244 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_0602 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 110 129 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_0602 528c7d00d62af10511f6b20750020ec6 261 PRINTS PR00783 Major intrinsic protein family signature 73 97 8.8E-36 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_0602 528c7d00d62af10511f6b20750020ec6 261 Gene3D G3DSA:1.20.1080.10 25 252 5.0E-57 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Acife_0602 528c7d00d62af10511f6b20750020ec6 261 ProSitePatterns PS00221 MIP family signature. 91 99 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Acife_0602 528c7d00d62af10511f6b20750020ec6 261 SUPERFAMILY SSF81338 30 246 4.19E-55 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Acife_0105 ddd7a8cc3121603d240baf3ab039d789 801 Gene3D G3DSA:2.170.130.10 62 192 1.7E-7 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Acife_0105 ddd7a8cc3121603d240baf3ab039d789 801 Gene3D G3DSA:2.40.170.20 200 801 5.3E-53 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Acife_0105 ddd7a8cc3121603d240baf3ab039d789 801 SUPERFAMILY SSF56935 60 801 5.86E-70 T 12-10-2018 Acife_0105 ddd7a8cc3121603d240baf3ab039d789 801 Pfam PF00593 TonB dependent receptor 291 799 8.2E-32 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Acife_0105 ddd7a8cc3121603d240baf3ab039d789 801 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 784 801 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site Acife_2706 0b3a9626ef00cc9abaa0d8d62d8d9885 91 PIRSF PIRSF002144 1 91 1.4E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2706 0b3a9626ef00cc9abaa0d8d62d8d9885 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 23.973 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2706 0b3a9626ef00cc9abaa0d8d62d8d9885 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.6E-22 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2706 0b3a9626ef00cc9abaa0d8d62d8d9885 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.6E-22 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2706 0b3a9626ef00cc9abaa0d8d62d8d9885 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.6E-22 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2706 0b3a9626ef00cc9abaa0d8d62d8d9885 91 Gene3D G3DSA:3.30.860.10 1 91 6.8E-37 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2706 0b3a9626ef00cc9abaa0d8d62d8d9885 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2706 0b3a9626ef00cc9abaa0d8d62d8d9885 91 Pfam PF00203 Ribosomal protein S19 3 83 1.2E-33 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2706 0b3a9626ef00cc9abaa0d8d62d8d9885 91 SUPERFAMILY SSF54570 3 83 1.96E-32 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2706 0b3a9626ef00cc9abaa0d8d62d8d9885 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 5.1E-42 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Acife_2494 68f33ba27afa903403cd5e345df0dea7 575 PRINTS PR01607 Apyrase family signature 316 336 6.3E-9 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Acife_2494 68f33ba27afa903403cd5e345df0dea7 575 PRINTS PR01607 Apyrase family signature 268 285 6.3E-9 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Acife_2494 68f33ba27afa903403cd5e345df0dea7 575 PRINTS PR01607 Apyrase family signature 287 310 6.3E-9 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Acife_2494 68f33ba27afa903403cd5e345df0dea7 575 PRINTS PR01607 Apyrase family signature 43 61 6.3E-9 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Acife_2494 68f33ba27afa903403cd5e345df0dea7 575 Gene3D G3DSA:3.60.21.10 107 378 3.1E-78 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Acife_2494 68f33ba27afa903403cd5e345df0dea7 575 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 5 557 2.8E-252 T 12-10-2018 IPR030998 Thiosulfohydrolase SoxB Acife_2494 68f33ba27afa903403cd5e345df0dea7 575 SUPERFAMILY SSF55816 376 549 1.57E-24 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Acife_2494 68f33ba27afa903403cd5e345df0dea7 575 Gene3D G3DSA:3.90.780.10 379 564 7.9E-66 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Acife_2494 68f33ba27afa903403cd5e345df0dea7 575 SUPERFAMILY SSF56300 39 377 2.35E-73 T 12-10-2018 Acife_2494 68f33ba27afa903403cd5e345df0dea7 575 Pfam PF02872 5'-nucleotidase, C-terminal domain 394 521 4.9E-10 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Acife_1356 a5b00136d4b46d2a1ea4cd5504c34a2b 349 SUPERFAMILY SSF51735 150 313 6.23E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1356 a5b00136d4b46d2a1ea4cd5504c34a2b 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 207 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Acife_1356 a5b00136d4b46d2a1ea4cd5504c34a2b 349 SUPERFAMILY SSF50129 6 173 7.55E-51 T 12-10-2018 IPR011032 GroES-like superfamily Acife_1356 a5b00136d4b46d2a1ea4cd5504c34a2b 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 144 9.4E-28 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Acife_1356 a5b00136d4b46d2a1ea4cd5504c34a2b 349 SMART SM00829 11 343 0.0018 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Acife_1356 a5b00136d4b46d2a1ea4cd5504c34a2b 349 Gene3D G3DSA:3.40.50.720 160 315 5.6E-132 T 12-10-2018 Acife_1356 a5b00136d4b46d2a1ea4cd5504c34a2b 349 Pfam PF00107 Zinc-binding dehydrogenase 186 309 1.4E-22 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Acife_1356 a5b00136d4b46d2a1ea4cd5504c34a2b 349 Gene3D G3DSA:3.90.180.10 13 343 5.6E-132 T 12-10-2018 Acife_1356 a5b00136d4b46d2a1ea4cd5504c34a2b 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Acife_0754 b98c68d36700186587012f7dae78023f 245 Pfam PF08722 TnsA endonuclease N terminal 77 171 8.6E-28 T 12-10-2018 IPR014833 TnsA endonuclease, N-terminal Acife_0754 b98c68d36700186587012f7dae78023f 245 SUPERFAMILY SSF52980 13 174 5.9E-55 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Acife_0754 b98c68d36700186587012f7dae78023f 245 Gene3D G3DSA:3.40.1350.10 9 174 4.9E-62 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Acife_2149 2322635211d2ff7648bc566e70f7846b 250 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Acife_2149 2322635211d2ff7648bc566e70f7846b 250 Gene3D G3DSA:1.20.120.1760 8 158 1.1E-16 T 12-10-2018 Acife_2149 2322635211d2ff7648bc566e70f7846b 250 Pfam PF01066 CDP-alcohol phosphatidyltransferase 12 76 1.3E-14 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Acife_2149 2322635211d2ff7648bc566e70f7846b 250 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 19 182 5.4E-40 T 12-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 Acife_2957 d1a37805c3a120d5e25a25be6945b4d1 108 Gene3D G3DSA:3.30.110.70 2 108 9.7E-27 T 12-10-2018 Acife_2957 d1a37805c3a120d5e25a25be6945b4d1 108 SUPERFAMILY SSF117782 1 107 5.62E-28 T 12-10-2018 IPR035439 UPF0145 domain superfamily Acife_2957 d1a37805c3a120d5e25a25be6945b4d1 108 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 107 21.062 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 Acife_2957 d1a37805c3a120d5e25a25be6945b4d1 108 Pfam PF01906 Putative heavy-metal-binding 1 106 6.1E-30 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 Acife_3146 b2be257284e9037c69f93412d8cb2a6a 327 SUPERFAMILY SSF53850 117 320 3.06E-46 T 12-10-2018 Acife_3146 b2be257284e9037c69f93412d8cb2a6a 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 30 89 4.5E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_3146 b2be257284e9037c69f93412d8cb2a6a 327 Pfam PF03466 LysR substrate binding domain 115 317 6.4E-52 T 12-10-2018 IPR005119 LysR, substrate-binding Acife_3146 b2be257284e9037c69f93412d8cb2a6a 327 SUPERFAMILY SSF46785 25 108 1.78E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_3146 b2be257284e9037c69f93412d8cb2a6a 327 Gene3D G3DSA:1.10.10.10 28 115 2.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_3146 b2be257284e9037c69f93412d8cb2a6a 327 Gene3D G3DSA:3.40.190.290 117 323 2.0E-43 T 12-10-2018 Acife_3146 b2be257284e9037c69f93412d8cb2a6a 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_3146 b2be257284e9037c69f93412d8cb2a6a 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 66 77 1.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_3146 b2be257284e9037c69f93412d8cb2a6a 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 66 1.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_2802 1c8eb2b846d1e9552e880ce78ec5cdab 408 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 408 152.858 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Acife_2802 1c8eb2b846d1e9552e880ce78ec5cdab 408 SUPERFAMILY SSF56266 14 405 1.23E-132 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Acife_2802 1c8eb2b846d1e9552e880ce78ec5cdab 408 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 10 408 9.9E-120 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Acife_2802 1c8eb2b846d1e9552e880ce78ec5cdab 408 Pfam PF01960 ArgJ family 20 408 5.5E-139 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Acife_2802 1c8eb2b846d1e9552e880ce78ec5cdab 408 Gene3D G3DSA:3.60.70.12 10 278 1.3E-87 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Acife_2802 1c8eb2b846d1e9552e880ce78ec5cdab 408 Gene3D G3DSA:3.10.20.340 279 408 9.8E-39 T 12-10-2018 Acife_2802 1c8eb2b846d1e9552e880ce78ec5cdab 408 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 22 406 1.0E-114 T 12-10-2018 Acife_0645 c031b6f3bc65225ffbd771a729a98aec 467 Gene3D G3DSA:1.10.4160.10 4 367 2.3E-16 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily Acife_0645 c031b6f3bc65225ffbd771a729a98aec 467 PIRSF PIRSF002744 2 451 1.6E-46 T 12-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 Acife_0645 c031b6f3bc65225ffbd771a729a98aec 467 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 368 3.5E-16 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Acife_1890 ee5337e717a9988b622ec685773a29f5 509 Gene3D G3DSA:3.90.1530.30 65 119 2.1E-11 T 12-10-2018 Acife_1890 ee5337e717a9988b622ec685773a29f5 509 SMART SM00470 37 163 9.8E-4 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Acife_1890 ee5337e717a9988b622ec685773a29f5 509 SUPERFAMILY SSF110849 65 167 9.24E-10 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Acife_1890 ee5337e717a9988b622ec685773a29f5 509 SUPERFAMILY SSF109709 156 211 2.22E-10 T 12-10-2018 Acife_1890 ee5337e717a9988b622ec685773a29f5 509 Gene3D G3DSA:1.10.10.2830 150 226 6.0E-9 T 12-10-2018 Acife_1890 ee5337e717a9988b622ec685773a29f5 509 Pfam PF02195 ParB-like nuclease domain 58 163 5.4E-9 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 Pfam PF09334 tRNA synthetases class I (M) 41 176 1.3E-20 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 421 621 3.4E-21 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 1.1E-50 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 217 236 1.1E-50 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 1.1E-50 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 527 549 1.1E-50 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 1.1E-50 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 490 508 1.1E-50 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 564 574 1.1E-50 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 SUPERFAMILY SSF47323 626 819 1.57E-34 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 Gene3D G3DSA:3.40.50.620 35 578 6.6E-255 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 Gene3D G3DSA:1.10.730.10 600 757 3.7E-45 T 12-10-2018 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 Gene3D G3DSA:3.90.740.10 230 418 6.6E-255 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 820 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 Pfam PF08264 Anticodon-binding domain of tRNA 664 782 3.3E-17 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 SUPERFAMILY SSF52374 5 631 9.75E-144 T 12-10-2018 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 223 405 4.1E-71 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 Gene3D G3DSA:3.10.20.590 760 821 9.4E-22 T 12-10-2018 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 5 820 22.883 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 SUPERFAMILY SSF50677 228 418 1.05E-53 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Acife_0844 08a7215c0d338e6b1a77b44df420722b 821 Gene3D G3DSA:2.30.210.10 579 590 6.6E-255 T 12-10-2018 Acife_2897 4e499ecf6f49d5b52d43a758982b0c44 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 40 55 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Acife_2897 4e499ecf6f49d5b52d43a758982b0c44 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Acife_2897 4e499ecf6f49d5b52d43a758982b0c44 90 Pfam PF00381 PTS HPr component phosphorylation site 7 82 5.4E-23 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Acife_2897 4e499ecf6f49d5b52d43a758982b0c44 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 5.2E-15 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Acife_2897 4e499ecf6f49d5b52d43a758982b0c44 90 PRINTS PR00107 Phosphocarrier protein signature 54 71 5.2E-15 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Acife_2897 4e499ecf6f49d5b52d43a758982b0c44 90 PRINTS PR00107 Phosphocarrier protein signature 39 54 5.2E-15 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Acife_2897 4e499ecf6f49d5b52d43a758982b0c44 90 Gene3D G3DSA:3.30.1340.10 4 89 6.9E-27 T 12-10-2018 IPR035895 HPr-like superfamily Acife_2897 4e499ecf6f49d5b52d43a758982b0c44 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 6 81 3.5E-25 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Acife_2897 4e499ecf6f49d5b52d43a758982b0c44 90 SUPERFAMILY SSF55594 4 89 1.83E-25 T 12-10-2018 IPR035895 HPr-like superfamily Acife_0442 7b7e44b5186d452baa4ce37a41f98c88 717 SUPERFAMILY SSF52540 101 556 3.9E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0442 7b7e44b5186d452baa4ce37a41f98c88 717 Gene3D G3DSA:3.40.50.300 101 238 1.1E-7 T 12-10-2018 Acife_0442 7b7e44b5186d452baa4ce37a41f98c88 717 Gene3D G3DSA:3.40.50.300 358 569 6.4E-9 T 12-10-2018 Acife_2929 f8dcf75637b0f1fe3eb7289e88ae6040 278 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 226 1.3E-65 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Acife_2929 f8dcf75637b0f1fe3eb7289e88ae6040 278 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 240 16.869 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Acife_2929 f8dcf75637b0f1fe3eb7289e88ae6040 278 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 5.0E-66 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Acife_2929 f8dcf75637b0f1fe3eb7289e88ae6040 278 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.2E-42 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Acife_2929 f8dcf75637b0f1fe3eb7289e88ae6040 278 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.2E-42 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Acife_2929 f8dcf75637b0f1fe3eb7289e88ae6040 278 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.2E-42 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Acife_2929 f8dcf75637b0f1fe3eb7289e88ae6040 278 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.2E-42 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Acife_1180 466339a39ad9fbc290879a11caad51ec 834 Gene3D G3DSA:3.40.50.300 578 819 3.8E-60 T 12-10-2018 Acife_1180 466339a39ad9fbc290879a11caad51ec 834 SUPERFAMILY SSF52540 626 803 8.43E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1180 466339a39ad9fbc290879a11caad51ec 834 Pfam PF13614 AAA domain 639 745 4.3E-9 T 12-10-2018 IPR025669 AAA domain Acife_1180 466339a39ad9fbc290879a11caad51ec 834 Pfam PF13807 G-rich domain on putative tyrosine kinase 481 557 1.7E-13 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain Acife_1180 466339a39ad9fbc290879a11caad51ec 834 Pfam PF02706 Chain length determinant protein 33 127 1.1E-6 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Acife_1180 466339a39ad9fbc290879a11caad51ec 834 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 610 812 6.3E-42 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Gene3D G3DSA:3.30.56.50 1 50 1.8E-7 T 12-10-2018 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 PRINTS PR00449 Transforming protein P21 ras signature 517 539 2.3E-5 T 12-10-2018 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 PRINTS PR00449 Transforming protein P21 ras signature 476 489 2.3E-5 T 12-10-2018 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 PRINTS PR00449 Transforming protein P21 ras signature 379 400 2.3E-5 T 12-10-2018 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 PRINTS PR00449 Transforming protein P21 ras signature 418 440 2.3E-5 T 12-10-2018 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Gene3D G3DSA:2.40.30.10 548 665 3.0E-36 T 12-10-2018 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Gene3D G3DSA:3.40.50.10050 670 777 4.9E-38 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Gene3D G3DSA:3.40.50.300 374 547 2.7E-70 T 12-10-2018 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Gene3D G3DSA:2.40.30.10 778 875 9.8E-34 T 12-10-2018 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 2 874 17.322 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Pfam PF00009 Elongation factor Tu GTP binding domain 381 537 1.5E-33 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 SUPERFAMILY SSF50447 778 874 3.73E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 SUPERFAMILY SSF52540 373 542 1.93E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Pfam PF11987 Translation-initiation factor 2 662 766 9.5E-37 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 294 875 1.9E-259 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 98 2.2E-14 T 12-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 ProSitePatterns PS01176 Initiation factor 2 signature. 827 849 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 SUPERFAMILY SSF46955 3 50 1.28E-7 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 SUPERFAMILY SSF52156 654 783 1.23E-37 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Pfam PF03144 Elongation factor Tu domain 2 797 864 2.5E-7 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 379 535 6.9E-31 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 SUPERFAMILY SSF50447 549 631 1.21E-22 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 46 4.0E-8 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Acife_2650 c1ba8ab81830b7d2615381cbdf7c34c6 876 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 299 350 1.8E-16 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Acife_2274 4b05d94d8c5408fd356f1e415cc9cceb 277 Gene3D G3DSA:3.60.110.10 1 271 8.9E-92 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Acife_2274 4b05d94d8c5408fd356f1e415cc9cceb 277 SUPERFAMILY SSF56317 3 264 8.11E-79 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Acife_2274 4b05d94d8c5408fd356f1e415cc9cceb 277 Pfam PF00795 Carbon-nitrogen hydrolase 5 255 2.3E-54 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Acife_0260 a22c3dd0b9060d0d07dce4d734d87db7 686 Pfam PF04932 O-Antigen ligase 207 347 1.8E-15 T 12-10-2018 IPR007016 O-antigen ligase-related Acife_0260 a22c3dd0b9060d0d07dce4d734d87db7 686 Gene3D G3DSA:1.25.40.10 502 682 1.8E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0260 a22c3dd0b9060d0d07dce4d734d87db7 686 SUPERFAMILY SSF48452 499 615 2.41E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0068 e213eb1e2988b6a8fd923c0cdb3b4daa 309 SMART SM00567 E-Z type HEAT repeats 168 197 840.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Acife_0068 e213eb1e2988b6a8fd923c0cdb3b4daa 309 SMART SM00567 E-Z type HEAT repeats 43 72 1.1 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Acife_0068 e213eb1e2988b6a8fd923c0cdb3b4daa 309 SMART SM00567 E-Z type HEAT repeats 199 228 86.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Acife_0068 e213eb1e2988b6a8fd923c0cdb3b4daa 309 SMART SM00567 E-Z type HEAT repeats 136 165 1200.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Acife_0068 e213eb1e2988b6a8fd923c0cdb3b4daa 309 SMART SM00567 E-Z type HEAT repeats 262 291 0.0011 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Acife_0068 e213eb1e2988b6a8fd923c0cdb3b4daa 309 Gene3D G3DSA:1.25.10.10 5 125 8.3E-14 T 12-10-2018 IPR011989 Armadillo-like helical Acife_0068 e213eb1e2988b6a8fd923c0cdb3b4daa 309 Gene3D G3DSA:1.25.10.10 126 309 1.5E-26 T 12-10-2018 IPR011989 Armadillo-like helical Acife_0068 e213eb1e2988b6a8fd923c0cdb3b4daa 309 Pfam PF13646 HEAT repeats 221 304 1.3E-12 T 12-10-2018 Acife_0068 e213eb1e2988b6a8fd923c0cdb3b4daa 309 Pfam PF13646 HEAT repeats 40 115 3.2E-8 T 12-10-2018 Acife_0068 e213eb1e2988b6a8fd923c0cdb3b4daa 309 SUPERFAMILY SSF48371 12 306 2.3E-35 T 12-10-2018 IPR016024 Armadillo-type fold Acife_2805 bb13fc6c53ef28ccc14f6518f8b483d6 321 SUPERFAMILY SSF54211 150 293 1.06E-51 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2805 bb13fc6c53ef28ccc14f6518f8b483d6 321 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 19 305 3.5E-114 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Acife_2805 bb13fc6c53ef28ccc14f6518f8b483d6 321 Gene3D G3DSA:3.30.230.20 18 144 6.3E-48 T 12-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Acife_2805 bb13fc6c53ef28ccc14f6518f8b483d6 321 Gene3D G3DSA:3.30.1700.10 145 319 1.1E-68 T 12-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Acife_2805 bb13fc6c53ef28ccc14f6518f8b483d6 321 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 21 292 2.5E-108 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Acife_2805 bb13fc6c53ef28ccc14f6518f8b483d6 321 SUPERFAMILY SSF54211 20 142 6.9E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2805 bb13fc6c53ef28ccc14f6518f8b483d6 321 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 19 296 46.342 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Acife_0073 6e5302661641fa47d32c44f62bbbb884 310 Gene3D G3DSA:1.10.10.10 3 92 9.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0073 6e5302661641fa47d32c44f62bbbb884 310 Pfam PF03466 LysR substrate binding domain 90 297 2.7E-39 T 12-10-2018 IPR005119 LysR, substrate-binding Acife_0073 6e5302661641fa47d32c44f62bbbb884 310 SUPERFAMILY SSF53850 92 299 5.12E-39 T 12-10-2018 Acife_0073 6e5302661641fa47d32c44f62bbbb884 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0073 6e5302661641fa47d32c44f62bbbb884 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0073 6e5302661641fa47d32c44f62bbbb884 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0073 6e5302661641fa47d32c44f62bbbb884 310 Gene3D G3DSA:3.40.190.10 93 294 1.3E-75 T 12-10-2018 Acife_0073 6e5302661641fa47d32c44f62bbbb884 310 SUPERFAMILY SSF46785 3 114 1.93E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0073 6e5302661641fa47d32c44f62bbbb884 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 65 1.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0073 6e5302661641fa47d32c44f62bbbb884 310 Gene3D G3DSA:3.40.190.10 166 271 1.3E-75 T 12-10-2018 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 350 37.395 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 SMART SM00864 13 205 2.3E-108 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 SUPERFAMILY SSF52490 14 205 4.32E-67 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 Gene3D G3DSA:3.40.50.1440 11 317 2.3E-114 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 Pfam PF12327 FtsZ family, C-terminal domain 222 317 9.8E-34 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 SUPERFAMILY SSF55307 204 319 1.92E-40 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 SMART SM00865 207 325 6.9E-54 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 321 5.5E-131 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 172 7.7E-41 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 PRINTS PR00423 Cell division protein FtsZ signature 126 147 3.7E-49 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 PRINTS PR00423 Cell division protein FtsZ signature 212 233 3.7E-49 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 PRINTS PR00423 Cell division protein FtsZ signature 189 211 3.7E-49 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Acife_2825 5800bd5376546b80ae95b242d7d2d268 387 PRINTS PR00423 Cell division protein FtsZ signature 98 118 3.7E-49 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 376 392 5.1E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 234 247 5.1E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 252 269 5.1E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 189 199 5.1E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 205 221 5.1E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 Pfam PF00152 tRNA synthetases class II (D, K and N) 153 491 2.5E-76 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 Gene3D G3DSA:3.30.930.10 145 489 3.5E-124 T 12-10-2018 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 SUPERFAMILY SSF55681 152 492 7.88E-114 T 12-10-2018 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 SUPERFAMILY SSF50249 4 145 1.64E-43 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 Pfam PF01336 OB-fold nucleic acid binding domain 61 136 6.2E-15 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 494 4.9E-192 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 Gene3D G3DSA:2.40.50.140 6 144 1.5E-41 T 12-10-2018 Acife_0926 ba67c2f38dfd167d954a15074a92b003 496 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 12 494 42.463 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Acife_2940 8eb7a769bff89742d12754962772d021 327 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 21 320 8.1E-88 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_2940 8eb7a769bff89742d12754962772d021 327 SUPERFAMILY SSF53671 19 322 1.31E-86 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Acife_2940 8eb7a769bff89742d12754962772d021 327 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 20 323 39.348 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_2940 8eb7a769bff89742d12754962772d021 327 Gene3D G3DSA:3.40.50.1370 153 300 3.0E-85 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Acife_2940 8eb7a769bff89742d12754962772d021 327 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 165 1.6E-39 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Acife_2940 8eb7a769bff89742d12754962772d021 327 Gene3D G3DSA:3.40.50.1370 24 316 3.0E-85 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Acife_2940 8eb7a769bff89742d12754962772d021 327 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 274 283 1.0E-18 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Acife_2940 8eb7a769bff89742d12754962772d021 327 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 286 309 1.0E-18 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Acife_2940 8eb7a769bff89742d12754962772d021 327 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 67 86 1.0E-18 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Acife_2940 8eb7a769bff89742d12754962772d021 327 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 153 164 1.0E-18 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Acife_2940 8eb7a769bff89742d12754962772d021 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 302 316 4.6E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_2940 8eb7a769bff89742d12754962772d021 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 57 79 4.6E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_2940 8eb7a769bff89742d12754962772d021 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 95 104 4.6E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_2940 8eb7a769bff89742d12754962772d021 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 237 246 4.6E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_2940 8eb7a769bff89742d12754962772d021 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 152 169 4.6E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_2940 8eb7a769bff89742d12754962772d021 327 PRINTS PR00101 Aspartate carbamoyltransferase signature 278 283 4.6E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_2940 8eb7a769bff89742d12754962772d021 327 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 67 74 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Acife_2940 8eb7a769bff89742d12754962772d021 327 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 174 319 3.3E-21 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Acife_2806 686241f8d925921f391144c96dc12cca 206 Gene3D G3DSA:1.20.1050.10 89 191 4.2E-69 T 12-10-2018 Acife_2806 686241f8d925921f391144c96dc12cca 206 SUPERFAMILY SSF52833 11 110 6.32E-27 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2806 686241f8d925921f391144c96dc12cca 206 SUPERFAMILY SSF47616 82 205 4.59E-24 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Acife_2806 686241f8d925921f391144c96dc12cca 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 8.2E-18 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Acife_2806 686241f8d925921f391144c96dc12cca 206 Gene3D G3DSA:3.40.30.10 11 199 4.2E-69 T 12-10-2018 Acife_2806 686241f8d925921f391144c96dc12cca 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 112 191 1.2E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal Acife_0533 adcccd2ada8ff66fed84ba2eb6f270aa 327 Gene3D G3DSA:3.30.420.40 5 174 1.6E-36 T 12-10-2018 Acife_0533 adcccd2ada8ff66fed84ba2eb6f270aa 327 SUPERFAMILY SSF53067 169 316 6.18E-13 T 12-10-2018 Acife_0533 adcccd2ada8ff66fed84ba2eb6f270aa 327 Pfam PF06406 StbA protein 7 297 2.3E-23 T 12-10-2018 IPR009440 Plasmid segregation protein ParM/StbA Acife_0533 adcccd2ada8ff66fed84ba2eb6f270aa 327 SUPERFAMILY SSF53067 6 160 4.4E-20 T 12-10-2018 Acife_0533 adcccd2ada8ff66fed84ba2eb6f270aa 327 Gene3D G3DSA:3.30.420.40 175 304 7.7E-22 T 12-10-2018 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 SUPERFAMILY SSF63737 13 199 3.14E-39 T 12-10-2018 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 1.5E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 1.5E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 1.5E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 1.5E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 1.5E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 Gene3D G3DSA:2.60.40.1730 18 200 1.6E-65 T 12-10-2018 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 15 870 0.0 T 12-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 450 548 2.1E-29 T 12-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 Gene3D G3DSA:1.10.1740.60 201 285 2.2E-37 T 12-10-2018 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 SUPERFAMILY SSF55486 211 455 1.41E-72 T 12-10-2018 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 Gene3D G3DSA:1.10.390.10 286 449 1.2E-64 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 Gene3D G3DSA:2.60.40.1840 450 548 1.4E-29 T 12-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 Pfam PF01433 Peptidase family M1 domain 214 444 1.1E-56 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 Gene3D G3DSA:1.25.50.10 551 871 5.8E-114 T 12-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily Acife_1409 c701ea3b9ac5c107e29ff758a171557f 875 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 552 870 3.7E-116 T 12-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 SMART SM00388 265 333 2.0E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 Gene3D G3DSA:3.30.565.10 328 488 3.3E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 SMART SM00304 213 264 6.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 266 331 2.5E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 SMART SM00387 378 489 9.5E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 379 487 1.7E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 SUPERFAMILY SSF47384 248 332 1.33E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 Pfam PF00672 HAMP domain 215 261 8.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 SUPERFAMILY SSF55874 323 487 1.57E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 443 5.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 429 5.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 5.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 5.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0684 4dcddf98e5598d1ed0d097357e6c7e09 494 Gene3D G3DSA:1.10.287.130 211 327 5.5E-21 T 12-10-2018 Acife_1457 84e59c3ef734e582647e216f235d8f65 232 Pfam PF02665 Nitrate reductase gamma subunit 6 227 8.0E-72 T 12-10-2018 IPR023234 NarG-like domain Acife_1457 84e59c3ef734e582647e216f235d8f65 232 Gene3D G3DSA:1.20.950.20 3 219 4.1E-68 T 12-10-2018 Acife_1457 84e59c3ef734e582647e216f235d8f65 232 SUPERFAMILY SSF103501 5 226 3.66E-58 T 12-10-2018 IPR036197 NarG-like superfamily Acife_1457 84e59c3ef734e582647e216f235d8f65 232 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 6 227 5.1E-64 T 12-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 Acife_2990 bed030de65047b4375be9d77bacc6416 454 Gene3D G3DSA:3.40.50.140 8 153 3.1E-21 T 12-10-2018 Acife_2990 bed030de65047b4375be9d77bacc6416 454 Pfam PF01131 DNA topoisomerase 153 206 6.1E-11 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_2990 bed030de65047b4375be9d77bacc6416 454 Pfam PF01131 DNA topoisomerase 211 265 2.1E-10 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_2990 bed030de65047b4375be9d77bacc6416 454 SMART SM00436 128 215 2.3E-5 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Acife_2990 bed030de65047b4375be9d77bacc6416 454 Gene3D G3DSA:1.10.290.10 217 273 4.6E-11 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Acife_2990 bed030de65047b4375be9d77bacc6416 454 SUPERFAMILY SSF56712 33 447 6.41E-53 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Acife_2990 bed030de65047b4375be9d77bacc6416 454 Gene3D G3DSA:1.10.460.10 161 205 8.7E-12 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Acife_2990 bed030de65047b4375be9d77bacc6416 454 Gene3D G3DSA:1.10.460.10 322 454 3.5E-16 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Acife_1504 125e4ec506fff1de4472d37ca0f657c7 405 Pfam PF00909 Ammonium Transporter Family 15 397 1.4E-87 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Acife_1504 125e4ec506fff1de4472d37ca0f657c7 405 ProSitePatterns PS01219 Ammonium transporters signature. 160 185 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Acife_1504 125e4ec506fff1de4472d37ca0f657c7 405 Gene3D G3DSA:1.10.3430.10 3 405 1.8E-99 T 12-10-2018 IPR029020 Ammonium/urea transporter Acife_1504 125e4ec506fff1de4472d37ca0f657c7 405 SUPERFAMILY SSF111352 10 378 1.83E-92 T 12-10-2018 Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 Gene3D G3DSA:3.30.2060.10 162 245 3.8E-18 T 12-10-2018 Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 SMART SM00487 9 425 2.7E-25 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 SMART SM00490 459 545 3.2E-20 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 Pfam PF12344 Ultra-violet resistance protein B 551 592 3.8E-20 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 SUPERFAMILY SSF46600 624 663 1.83E-10 T 12-10-2018 IPR036876 UVR domain superfamily Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 Pfam PF02151 UvrB/uvrC motif 628 661 5.3E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 Pfam PF00271 Helicase conserved C-terminal domain 441 543 4.1E-17 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 Gene3D G3DSA:3.40.50.300 1 161 9.7E-67 T 12-10-2018 Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 Gene3D G3DSA:3.40.50.300 274 413 2.4E-52 T 12-10-2018 Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 662 42.771 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 SUPERFAMILY SSF52540 5 414 6.75E-132 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 Gene3D G3DSA:4.10.860.10 616 666 7.8E-14 T 12-10-2018 Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 Pfam PF04851 Type III restriction enzyme, res subunit 16 87 9.6E-7 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 Gene3D G3DSA:3.40.50.300 414 595 9.0E-49 T 12-10-2018 Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 SUPERFAMILY SSF52540 37 583 3.99E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1355 8d639457f03929e8040e322c5b6a30f0 675 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 659 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Acife_2536 321719059c8feb84cd9673776fb5d314 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.703 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2536 321719059c8feb84cd9673776fb5d314 119 SUPERFAMILY SSF74731 3 116 8.89E-48 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2536 321719059c8feb84cd9673776fb5d314 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.4E-39 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2536 321719059c8feb84cd9673776fb5d314 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.4E-39 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2536 321719059c8feb84cd9673776fb5d314 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.4E-39 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2536 321719059c8feb84cd9673776fb5d314 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2536 321719059c8feb84cd9673776fb5d314 119 Pfam PF00453 Ribosomal protein L20 3 109 1.9E-47 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2536 321719059c8feb84cd9673776fb5d314 119 Gene3D G3DSA:1.10.1900.20 56 118 4.6E-28 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2536 321719059c8feb84cd9673776fb5d314 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 7.0E-15 T 12-10-2018 Acife_2536 321719059c8feb84cd9673776fb5d314 119 Gene3D G3DSA:1.10.720.90 2 55 2.5E-24 T 12-10-2018 Acife_2536 321719059c8feb84cd9673776fb5d314 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.0E-48 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0211 8d6a0165cc6d72d9e15818cd13dbfb53 222 SUPERFAMILY SSF81342 10 191 1.8E-30 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Acife_0211 8d6a0165cc6d72d9e15818cd13dbfb53 222 Gene3D G3DSA:1.20.950.20 5 175 2.0E-13 T 12-10-2018 Acife_0211 8d6a0165cc6d72d9e15818cd13dbfb53 222 Pfam PF01292 Prokaryotic cytochrome b561 14 186 4.7E-14 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Acife_3077 c0b363dea684528b800f86841f64debf 436 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 23 427 8.8E-204 T 12-10-2018 IPR011718 Glutamate--cysteine ligase GshA Acife_3077 c0b363dea684528b800f86841f64debf 436 Gene3D G3DSA:3.40.50.11280 71 207 7.4E-43 T 12-10-2018 Acife_3077 c0b363dea684528b800f86841f64debf 436 Pfam PF08886 Glutamate-cysteine ligase 23 423 2.0E-182 T 12-10-2018 IPR011718 Glutamate--cysteine ligase GshA Acife_2699 455821cb6edb779164600f5b83d9661f 106 SUPERFAMILY SSF50104 2 102 1.28E-34 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Acife_2699 455821cb6edb779164600f5b83d9661f 106 Pfam PF00467 KOW motif 6 37 8.7E-7 T 12-10-2018 IPR005824 KOW Acife_2699 455821cb6edb779164600f5b83d9661f 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 103 5.5E-39 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2699 455821cb6edb779164600f5b83d9661f 106 SMART SM00739 3 30 9.7E-5 T 12-10-2018 IPR005824 KOW Acife_2699 455821cb6edb779164600f5b83d9661f 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 21.842 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2699 455821cb6edb779164600f5b83d9661f 106 Gene3D G3DSA:2.30.30.30 1 104 3.6E-37 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Acife_2699 455821cb6edb779164600f5b83d9661f 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2699 455821cb6edb779164600f5b83d9661f 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 3.5E-26 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0002 9a1d648d74e3b5cb45f07d98c3536536 365 Gene3D G3DSA:3.10.150.10 1 241 1.0E-96 T 12-10-2018 Acife_0002 9a1d648d74e3b5cb45f07d98c3536536 365 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 365 1.3E-84 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Acife_0002 9a1d648d74e3b5cb45f07d98c3536536 365 SUPERFAMILY SSF55979 1 116 6.96E-23 T 12-10-2018 Acife_0002 9a1d648d74e3b5cb45f07d98c3536536 365 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 244 364 3.2E-20 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Acife_0002 9a1d648d74e3b5cb45f07d98c3536536 365 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 242 8.3E-27 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Acife_0002 9a1d648d74e3b5cb45f07d98c3536536 365 SMART SM00480 17 361 9.4E-82 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Acife_0002 9a1d648d74e3b5cb45f07d98c3536536 365 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 9.9E-27 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Acife_0002 9a1d648d74e3b5cb45f07d98c3536536 365 Gene3D G3DSA:3.70.10.10 137 363 1.0E-96 T 12-10-2018 Acife_0002 9a1d648d74e3b5cb45f07d98c3536536 365 SUPERFAMILY SSF55979 244 365 7.73E-28 T 12-10-2018 Acife_0002 9a1d648d74e3b5cb45f07d98c3536536 365 SUPERFAMILY SSF55979 128 243 2.48E-22 T 12-10-2018 Acife_0002 9a1d648d74e3b5cb45f07d98c3536536 365 PIRSF PIRSF000804 1 365 2.3E-99 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Acife_2164 7aa36287ed77949a128be6e34a82e772 364 SUPERFAMILY SSF56796 4 356 6.67E-116 T 12-10-2018 Acife_2164 7aa36287ed77949a128be6e34a82e772 364 Gene3D G3DSA:3.40.50.1970 1 172 1.8E-64 T 12-10-2018 Acife_2164 7aa36287ed77949a128be6e34a82e772 364 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 71.279 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Acife_2164 7aa36287ed77949a128be6e34a82e772 364 Pfam PF01761 3-dehydroquinate synthase 67 324 4.2E-105 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Acife_2164 7aa36287ed77949a128be6e34a82e772 364 Gene3D G3DSA:1.20.1090.10 173 361 3.4E-68 T 12-10-2018 Acife_2164 7aa36287ed77949a128be6e34a82e772 364 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 1.5E-116 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Acife_2164 7aa36287ed77949a128be6e34a82e772 364 PIRSF PIRSF001455 5 362 1.0E-109 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 SUPERFAMILY SSF55103 671 775 6.7E-28 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 Gene3D G3DSA:1.10.1060.10 785 904 8.8E-6 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 SUPERFAMILY SSF55103 412 546 1.16E-14 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 Pfam PF02913 FAD linked oxidases, C-terminal domain 428 542 6.1E-9 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 Pfam PF02913 FAD linked oxidases, C-terminal domain 671 773 7.9E-21 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 Pfam PF12447 Protein of unknown function (DUF3683) 4 115 2.0E-47 T 12-10-2018 IPR022153 Protein of unknown function DUF3683 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 Pfam PF11880 Domain of unknown function (DUF3400) 1233 1277 4.2E-21 T 12-10-2018 IPR021817 Protein of unknown function DUF3400 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 Pfam PF01565 FAD binding domain 165 310 3.8E-25 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 Gene3D G3DSA:3.30.70.2740 663 737 4.2E-7 T 12-10-2018 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 SUPERFAMILY SSF56176 128 394 2.06E-53 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 Pfam PF02754 Cysteine-rich domain 1142 1230 0.0062 T 12-10-2018 IPR004017 Cysteine-rich domain Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 Pfam PF02754 Cysteine-rich domain 1017 1105 2.3E-5 T 12-10-2018 IPR004017 Cysteine-rich domain Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 Pfam PF13183 4Fe-4S dicluster domain 809 888 2.3E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 Gene3D G3DSA:3.30.465.40 126 321 6.0E-35 T 12-10-2018 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 SUPERFAMILY SSF46548 803 904 2.25E-12 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Acife_2048 174952a72f91ba9ef33f802c6f8e88b5 1277 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 874 885 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_0984 4bbdf9e15787f35cf9475720c32198c7 165 Gene3D G3DSA:3.40.390.30 4 164 7.7E-42 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Acife_0984 4bbdf9e15787f35cf9475720c32198c7 165 Pfam PF02130 Uncharacterized protein family UPF0054 43 152 4.7E-33 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Acife_0984 4bbdf9e15787f35cf9475720c32198c7 165 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 157 20.873 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Acife_0984 4bbdf9e15787f35cf9475720c32198c7 165 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 123 133 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Acife_0984 4bbdf9e15787f35cf9475720c32198c7 165 SUPERFAMILY SSF55486 42 159 4.39E-38 T 12-10-2018 Acife_0984 4bbdf9e15787f35cf9475720c32198c7 165 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 48 154 4.5E-31 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Acife_1923 a62f028766b7cf3cbb2c3e8669b7dbbc 117 SUPERFAMILY SSF50118 6 114 4.8E-22 T 12-10-2018 Acife_1923 a62f028766b7cf3cbb2c3e8669b7dbbc 117 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 9 113 5.8E-18 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Acife_1923 a62f028766b7cf3cbb2c3e8669b7dbbc 117 Gene3D G3DSA:2.30.30.110 8 115 2.5E-29 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 622 736 8.4E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 PIRSF PIRSF037532 13 737 9.1E-208 T 12-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 SUPERFAMILY SSF47384 505 578 9.61E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 Gene3D G3DSA:3.30.565.10 583 737 1.2E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 682 6.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 715 6.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 686 696 6.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 Pfam PF00512 His Kinase A (phospho-acceptor) domain 512 567 7.2E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 SMART SM00304 325 377 1.2E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 SUPERFAMILY SSF158472 325 373 5.49E-7 T 12-10-2018 Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 Pfam PF00672 HAMP domain 325 373 5.4E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 SUPERFAMILY SSF55874 578 736 1.31E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 SUPERFAMILY SSF55785 381 500 1.76E-7 T 12-10-2018 IPR035965 PAS domain superfamily Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 Gene3D G3DSA:3.30.450.20 381 503 3.2E-7 T 12-10-2018 Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 SMART SM00387 621 737 5.2E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 Gene3D G3DSA:1.10.287.130 504 579 2.4E-10 T 12-10-2018 Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 Gene3D G3DSA:1.20.1480.50 294 380 3.6E-9 T 12-10-2018 Acife_0019 509824a4c46d639f5112e31ec279bd4d 737 SMART SM00388 510 581 2.0E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2789 72b64344a18f3b99a1e6d405825c71f3 385 SUPERFAMILY SSF53383 9 384 5.72E-89 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_2789 72b64344a18f3b99a1e6d405825c71f3 385 Gene3D G3DSA:3.40.640.10 65 282 6.4E-124 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_2789 72b64344a18f3b99a1e6d405825c71f3 385 Pfam PF00155 Aminotransferase class I and II 44 378 7.0E-31 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Acife_2789 72b64344a18f3b99a1e6d405825c71f3 385 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 10 384 1.9E-154 T 12-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 Acife_2789 72b64344a18f3b99a1e6d405825c71f3 385 Gene3D G3DSA:3.90.1150.10 23 378 6.4E-124 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1291 73b2033297f3f07b6d3265179cfb648d 255 Pfam PF00005 ABC transporter 26 180 1.0E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_1291 73b2033297f3f07b6d3265179cfb648d 255 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 9 255 2.1E-119 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Acife_1291 73b2033297f3f07b6d3265179cfb648d 255 SUPERFAMILY SSF52540 8 242 2.54E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1291 73b2033297f3f07b6d3265179cfb648d 255 SMART SM00382 33 243 1.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1291 73b2033297f3f07b6d3265179cfb648d 255 Gene3D G3DSA:3.40.50.300 4 252 3.0E-67 T 12-10-2018 Acife_1291 73b2033297f3f07b6d3265179cfb648d 255 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Gene3D G3DSA:3.40.50.740 281 344 3.4E-15 T 12-10-2018 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Gene3D G3DSA:3.40.50.740 470 657 6.4E-24 T 12-10-2018 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 SUPERFAMILY SSF54292 2 114 9.43E-31 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 627 4.5E-196 T 12-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 216 264 6.0E-7 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 SMART SM00926 215 270 1.0E-7 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 SUPERFAMILY SSF54862 76 211 5.23E-35 T 12-10-2018 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 SMART SM00929 83 123 2.6E-15 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 116 4.2E-14 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Gene3D G3DSA:3.40.228.10 345 434 3.4E-15 T 12-10-2018 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Gene3D G3DSA:3.30.70.20 124 204 3.8E-7 T 12-10-2018 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Gene3D G3DSA:3.10.20.740 1 122 3.5E-40 T 12-10-2018 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 SUPERFAMILY SSF53706 213 651 1.23E-90 T 12-10-2018 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Pfam PF01568 Molydopterin dinucleotide binding domain 702 759 8.6E-8 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Pfam PF00384 Molybdopterin oxidoreductase 272 627 1.0E-36 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 76 2.3E-17 T 12-10-2018 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Gene3D G3DSA:2.40.40.20 690 776 2.2E-6 T 12-10-2018 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 Gene3D G3DSA:2.20.25.90 215 268 7.8E-12 T 12-10-2018 Acife_2548 b129e93f2e85e5fbcf62f0f1f09dba22 781 SUPERFAMILY SSF50692 702 759 5.88E-7 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 SUPERFAMILY SSF54980 399 475 2.05E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 SUPERFAMILY SSF52540 18 285 1.41E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 Gene3D G3DSA:3.40.50.300 118 282 7.4E-109 T 12-10-2018 Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 PRINTS PR00315 GTP-binding elongation factor signature 73 81 2.4E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 PRINTS PR00315 GTP-binding elongation factor signature 109 120 2.4E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 PRINTS PR00315 GTP-binding elongation factor signature 145 154 2.4E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 PRINTS PR00315 GTP-binding elongation factor signature 23 36 2.4E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 PRINTS PR00315 GTP-binding elongation factor signature 93 103 2.4E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 Gene3D G3DSA:3.30.70.3280 397 536 2.5E-50 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 13 536 1.0E-245 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 24 161 2.6E-18 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 Gene3D G3DSA:3.40.50.300 80 386 7.4E-109 T 12-10-2018 Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 SUPERFAMILY SSF50447 268 399 7.29E-28 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 Pfam PF03144 Elongation factor Tu domain 2 321 385 2.1E-8 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 Pfam PF16658 Class II release factor RF3, C-terminal domain 394 521 7.6E-46 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 66 81 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 Pfam PF00009 Elongation factor Tu GTP binding domain 20 285 4.8E-48 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2433 89963f6f8b29694893bbc62a436ebe79 539 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 12 534 52.136 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Acife_3142 444ae5b34e8932702bae813a0ab89edc 536 Gene3D G3DSA:3.30.1330.140 410 526 3.6E-50 T 12-10-2018 Acife_3142 444ae5b34e8932702bae813a0ab89edc 536 TIGRFAM TIGR02701 shell_carb_anhy: carboxysome shell carbonic anhydrase 67 514 6.6E-231 T 12-10-2018 IPR014074 Carboxysome shell carbonic anhydrase Acife_3142 444ae5b34e8932702bae813a0ab89edc 536 Pfam PF08936 Carboxysome Shell Carbonic Anhydrase 67 523 4.6E-208 T 12-10-2018 IPR014074 Carboxysome shell carbonic anhydrase Acife_3142 444ae5b34e8932702bae813a0ab89edc 536 Gene3D G3DSA:1.20.120.1310 54 160 8.3E-41 T 12-10-2018 Acife_2118 10f3707b5f02fd0b1746193d88928e00 569 SUPERFAMILY SSF81340 24 430 1.12E-83 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Acife_2118 10f3707b5f02fd0b1746193d88928e00 569 Gene3D G3DSA:1.10.3080.10 28 441 4.8E-78 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Acife_2118 10f3707b5f02fd0b1746193d88928e00 569 Pfam PF00654 Voltage gated chloride channel 86 423 9.7E-72 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_2118 10f3707b5f02fd0b1746193d88928e00 569 SUPERFAMILY SSF54631 455 565 1.18E-6 T 12-10-2018 Acife_2118 10f3707b5f02fd0b1746193d88928e00 569 PRINTS PR00762 Chloride channel signature 178 197 9.0E-17 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_2118 10f3707b5f02fd0b1746193d88928e00 569 PRINTS PR00762 Chloride channel signature 390 409 9.0E-17 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_2118 10f3707b5f02fd0b1746193d88928e00 569 PRINTS PR00762 Chloride channel signature 372 388 9.0E-17 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_2118 10f3707b5f02fd0b1746193d88928e00 569 PRINTS PR00762 Chloride channel signature 127 146 9.0E-17 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_2118 10f3707b5f02fd0b1746193d88928e00 569 Gene3D G3DSA:3.10.580.10 456 569 8.1E-7 T 12-10-2018 Acife_0724 e05cc2cd2b92659eb317136e65e10a5a 427 Gene3D G3DSA:1.10.150.20 171 231 2.4E-10 T 12-10-2018 Acife_0724 e05cc2cd2b92659eb317136e65e10a5a 427 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 355 1.8E-13 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Acife_0724 e05cc2cd2b92659eb317136e65e10a5a 427 Gene3D G3DSA:2.30.40.20 11 74 3.0E-42 T 12-10-2018 Acife_0724 e05cc2cd2b92659eb317136e65e10a5a 427 Gene3D G3DSA:3.30.70.270 3 155 3.0E-42 T 12-10-2018 Acife_0724 e05cc2cd2b92659eb317136e65e10a5a 427 SUPERFAMILY SSF56672 1 236 1.87E-70 T 12-10-2018 Acife_0724 e05cc2cd2b92659eb317136e65e10a5a 427 Pfam PF00817 impB/mucB/samB family 6 150 1.9E-32 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Acife_0724 e05cc2cd2b92659eb317136e65e10a5a 427 Pfam PF13438 Domain of unknown function (DUF4113) 373 423 1.2E-18 T 12-10-2018 IPR025188 Domain of unknown function DUF4113 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 417 479 7.6E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 45 489 4.3E-142 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 Gene3D G3DSA:2.30.42.10 283 384 4.0E-24 T 12-10-2018 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 Gene3D G3DSA:2.40.10.120 44 280 3.5E-77 T 12-10-2018 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 SUPERFAMILY SSF50156 424 491 1.71E-13 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 SUPERFAMILY SSF50494 43 278 3.77E-61 T 12-10-2018 IPR009003 Peptidase S1, PA clan Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 PRINTS PR00834 HtrA/DegQ protease family signature 327 339 8.1E-44 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 8.1E-44 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 PRINTS PR00834 HtrA/DegQ protease family signature 185 209 8.1E-44 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 8.1E-44 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 8.1E-44 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 8.1E-44 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 Pfam PF13180 PDZ domain 298 374 1.6E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 SUPERFAMILY SSF50156 245 370 9.6E-25 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 Gene3D G3DSA:2.30.42.10 406 490 7.8E-16 T 12-10-2018 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 SMART SM00228 287 369 7.1E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 SMART SM00228 370 483 4.6E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_1763 b14ff0f05f84ebdbcc165a25d1faa906 494 Pfam PF13365 Trypsin-like peptidase domain 115 248 1.6E-32 T 12-10-2018 Acife_1964 dc3844cb704e028231af31b2c520405a 92 Gene3D G3DSA:1.10.1220.10 10 51 2.3E-5 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Acife_1964 dc3844cb704e028231af31b2c520405a 92 SUPERFAMILY SSF47598 3 44 2.52E-11 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_1964 dc3844cb704e028231af31b2c520405a 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 3.8E-10 T 12-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 347 8.6E-89 T 12-10-2018 IPR028053 Membrane insertase YidC, N-terminal Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 PRINTS PR00701 60kDa inner membrane protein signature 2 23 9.4E-62 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 PRINTS PR00701 60kDa inner membrane protein signature 83 104 9.4E-62 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 PRINTS PR00701 60kDa inner membrane protein signature 247 262 9.4E-62 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 PRINTS PR00701 60kDa inner membrane protein signature 410 433 9.4E-62 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 PRINTS PR00701 60kDa inner membrane protein signature 457 479 9.4E-62 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 PRINTS PR00701 60kDa inner membrane protein signature 493 516 9.4E-62 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 PRINTS PR00701 60kDa inner membrane protein signature 319 339 9.4E-62 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 PRINTS PR01900 YidC translocation/secretion protein signature 482 506 6.5E-24 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 PRINTS PR01900 YidC translocation/secretion protein signature 463 478 6.5E-24 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 PRINTS PR01900 YidC translocation/secretion protein signature 334 350 6.5E-24 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 Pfam PF02096 60Kd inner membrane protein 349 527 1.5E-56 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 348 527 3.6E-67 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 Gene3D G3DSA:2.70.98.90 74 328 5.9E-59 T 12-10-2018 IPR038221 YidC, periplasmic domain superfamily Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 Pfam PF14849 YidC periplasmic domain 78 336 2.0E-62 T 12-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain Acife_0155 4c83f6772f425d3d457733f2b5e60efc 534 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 529 21.949 T 12-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 Acife_3075 52fa3e1b047ccef7213a5f0c85c7e08c 393 Gene3D G3DSA:3.30.160.390 1 87 1.3E-31 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Acife_3075 52fa3e1b047ccef7213a5f0c85c7e08c 393 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 98 149 6.9E-7 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Acife_3075 52fa3e1b047ccef7213a5f0c85c7e08c 393 Gene3D G3DSA:1.10.150.130 88 203 1.6E-26 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_3075 52fa3e1b047ccef7213a5f0c85c7e08c 393 Gene3D G3DSA:1.10.443.10 204 381 3.5E-16 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_3075 52fa3e1b047ccef7213a5f0c85c7e08c 393 Pfam PF00589 Phage integrase family 210 370 1.5E-19 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_3075 52fa3e1b047ccef7213a5f0c85c7e08c 393 SUPERFAMILY SSF56349 97 380 1.59E-55 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_3075 52fa3e1b047ccef7213a5f0c85c7e08c 393 Pfam PF13356 Arm DNA-binding domain 2 85 2.8E-19 T 12-10-2018 IPR025166 Integrase, DNA-binding domain Acife_2158 4c86b5039f69f24a6b5ba2aec1ea8676 354 Gene3D G3DSA:3.30.1490.300 85 144 5.8E-80 T 12-10-2018 Acife_2158 4c86b5039f69f24a6b5ba2aec1ea8676 354 SUPERFAMILY SSF53067 194 350 1.1E-10 T 12-10-2018 Acife_2158 4c86b5039f69f24a6b5ba2aec1ea8676 354 SUPERFAMILY SSF53067 45 172 7.77E-12 T 12-10-2018 Acife_2158 4c86b5039f69f24a6b5ba2aec1ea8676 354 Gene3D G3DSA:3.30.420.40 10 350 5.8E-80 T 12-10-2018 Acife_2158 4c86b5039f69f24a6b5ba2aec1ea8676 354 PIRSF PIRSF019169 2 353 2.7E-101 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM Acife_2158 4c86b5039f69f24a6b5ba2aec1ea8676 354 Pfam PF11104 Type IV pilus assembly protein PilM; 11 351 1.9E-95 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM Acife_2158 4c86b5039f69f24a6b5ba2aec1ea8676 354 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 9 351 2.1E-84 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM Acife_2158 4c86b5039f69f24a6b5ba2aec1ea8676 354 Gene3D G3DSA:3.30.420.40 189 316 5.8E-80 T 12-10-2018 Acife_2817 6af8a91d7c5ed299c2145bdb2a8e6d57 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 6 443 32.614 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Acife_2817 6af8a91d7c5ed299c2145bdb2a8e6d57 448 SUPERFAMILY SSF51984 1 95 5.89E-17 T 12-10-2018 Acife_2817 6af8a91d7c5ed299c2145bdb2a8e6d57 448 Gene3D G3DSA:3.40.1190.10 95 306 8.3E-60 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_2817 6af8a91d7c5ed299c2145bdb2a8e6d57 448 Gene3D G3DSA:3.90.190.20 307 439 1.9E-40 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_2817 6af8a91d7c5ed299c2145bdb2a8e6d57 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 7 441 9.7E-121 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Acife_2817 6af8a91d7c5ed299c2145bdb2a8e6d57 448 SUPERFAMILY SSF53623 97 304 3.53E-51 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_2817 6af8a91d7c5ed299c2145bdb2a8e6d57 448 Pfam PF08245 Mur ligase middle domain 111 286 2.0E-27 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Acife_2817 6af8a91d7c5ed299c2145bdb2a8e6d57 448 Gene3D G3DSA:3.40.50.720 1 94 8.0E-19 T 12-10-2018 Acife_2817 6af8a91d7c5ed299c2145bdb2a8e6d57 448 SUPERFAMILY SSF53244 306 442 3.66E-38 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_0379 762ff215375e71004e9bbfb96588407e 196 SUPERFAMILY SSF109854 6 146 1.14E-25 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Acife_0379 762ff215375e71004e9bbfb96588407e 196 Pfam PF05163 DinB family 4 159 2.7E-24 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB Acife_0379 762ff215375e71004e9bbfb96588407e 196 Gene3D G3DSA:1.20.120.450 2 166 4.0E-35 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Acife_1130 cadf2ef7e1e784b9976cf6ce366928c8 412 Gene3D G3DSA:3.40.50.720 166 412 7.9E-66 T 12-10-2018 Acife_1130 cadf2ef7e1e784b9976cf6ce366928c8 412 SUPERFAMILY SSF51735 168 411 2.74E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1130 cadf2ef7e1e784b9976cf6ce366928c8 412 SMART SM01274 23 156 1.9E-75 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Acife_1130 cadf2ef7e1e784b9976cf6ce366928c8 412 SUPERFAMILY SSF53223 16 166 9.35E-51 T 12-10-2018 Acife_1130 cadf2ef7e1e784b9976cf6ce366928c8 412 SMART SM00919 168 405 5.2E-102 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Acife_1130 cadf2ef7e1e784b9976cf6ce366928c8 412 Pfam PF03949 Malic enzyme, NAD binding domain 170 358 2.9E-17 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Acife_1130 cadf2ef7e1e784b9976cf6ce366928c8 412 Gene3D G3DSA:3.40.50.10380 3 165 1.4E-67 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Acife_1130 cadf2ef7e1e784b9976cf6ce366928c8 412 Pfam PF00390 Malic enzyme, N-terminal domain 25 119 1.1E-21 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Acife_1644 1cb06acccc82ffabc164a76b20eb5be4 453 SUPERFAMILY SSF53807 6 436 1.05E-130 T 12-10-2018 Acife_1644 1cb06acccc82ffabc164a76b20eb5be4 453 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 3 427 8.3E-175 T 12-10-2018 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0009399|GO:0065003 Acife_1644 1cb06acccc82ffabc164a76b20eb5be4 453 Gene3D G3DSA:3.40.50.1980 160 415 7.1E-120 T 12-10-2018 Acife_1644 1cb06acccc82ffabc164a76b20eb5be4 453 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 37 44 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Acife_1644 1cb06acccc82ffabc164a76b20eb5be4 453 Gene3D G3DSA:3.40.50.1980 8 408 7.1E-120 T 12-10-2018 Acife_1644 1cb06acccc82ffabc164a76b20eb5be4 453 Gene3D G3DSA:3.40.50.1980 19 159 7.1E-120 T 12-10-2018 Acife_1644 1cb06acccc82ffabc164a76b20eb5be4 453 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 19 425 3.6E-111 T 12-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Acife_1644 1cb06acccc82ffabc164a76b20eb5be4 453 Gene3D G3DSA:1.20.89.10 266 431 7.1E-120 T 12-10-2018 Acife_1632 99aff3754aafe1ee6acbf91bb67028bc 110 Hamap MF_00529 Nitrogenase-stabilizing/protective protein NifW [nifW]. 2 103 21.112 T 12-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 Acife_1632 99aff3754aafe1ee6acbf91bb67028bc 110 PIRSF PIRSF005790 1 105 3.5E-32 T 12-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 Acife_1632 99aff3754aafe1ee6acbf91bb67028bc 110 Pfam PF03206 Nitrogen fixation protein NifW 6 101 3.2E-32 T 12-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 Acife_2190 b38d0c82b525e7e46f7081ad2bd3adf0 441 SUPERFAMILY SSF56176 353 438 4.09E-19 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Acife_2190 b38d0c82b525e7e46f7081ad2bd3adf0 441 Gene3D G3DSA:3.10.580.10 202 346 8.9E-33 T 12-10-2018 Acife_2190 b38d0c82b525e7e46f7081ad2bd3adf0 441 Pfam PF03471 Transporter associated domain 357 430 1.3E-18 T 12-10-2018 IPR005170 Transporter-associated domain Acife_2190 b38d0c82b525e7e46f7081ad2bd3adf0 441 SUPERFAMILY SSF54631 209 348 2.56E-24 T 12-10-2018 Acife_2190 b38d0c82b525e7e46f7081ad2bd3adf0 441 SMART SM01091 354 432 4.2E-23 T 12-10-2018 IPR005170 Transporter-associated domain Acife_2190 b38d0c82b525e7e46f7081ad2bd3adf0 441 Pfam PF00571 CBS domain 219 277 8.5E-5 T 12-10-2018 IPR000644 CBS domain Acife_2190 b38d0c82b525e7e46f7081ad2bd3adf0 441 Pfam PF01595 Domain of unknown function DUF21 8 200 2.2E-44 T 12-10-2018 IPR002550 CNNM, transmembrane domain Acife_2190 b38d0c82b525e7e46f7081ad2bd3adf0 441 Gene3D G3DSA:3.30.465.10 347 431 1.0E-17 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Acife_2434 972f8968bbcf81b492b63ca221dd4a80 156 Gene3D G3DSA:3.40.630.30 2 152 2.1E-40 T 12-10-2018 Acife_2434 972f8968bbcf81b492b63ca221dd4a80 156 SUPERFAMILY SSF55729 1 145 6.18E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_2434 972f8968bbcf81b492b63ca221dd4a80 156 Pfam PF00583 Acetyltransferase (GNAT) family 38 120 2.3E-12 T 12-10-2018 IPR000182 GNAT domain Acife_2434 972f8968bbcf81b492b63ca221dd4a80 156 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 10 141 1.6E-32 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 Gene3D G3DSA:1.10.150.20 67 137 1.7E-25 T 12-10-2018 Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.8E-16 T 12-10-2018 Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 SUPERFAMILY SSF47781 65 133 2.27E-20 T 12-10-2018 IPR010994 RuvA domain 2-like Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 28.591 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 190 2.3E-49 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 Pfam PF07499 RuvA, C-terminal domain 147 191 4.6E-13 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 SUPERFAMILY SSF50249 1 63 1.31E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 SUPERFAMILY SSF46929 147 192 2.88E-8 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 Gene3D G3DSA:1.10.8.10 145 190 7.0E-12 T 12-10-2018 Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 Pfam PF01330 RuvA N terminal domain 1 62 3.3E-17 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 Gene3D G3DSA:2.40.50.140 1 66 3.0E-22 T 12-10-2018 Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 SMART SM00278 108 127 0.015 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Acife_0142 50783fc780d8c73e7230d2452fb6f0ec 193 SMART SM00278 73 92 190.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 Gene3D G3DSA:3.40.50.620 4 220 6.3E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 SUPERFAMILY SSF55174 324 400 9.42E-17 T 12-10-2018 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 Gene3D G3DSA:1.10.240.10 221 329 9.4E-30 T 12-10-2018 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 Pfam PF00579 tRNA synthetases class I (W and Y) 34 321 1.7E-77 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 401 47.243 T 12-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 24 401 5.0E-110 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 Pfam PF01479 S4 domain 341 385 1.2E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 SUPERFAMILY SSF52374 7 320 9.01E-88 T 12-10-2018 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 SMART SM00363 340 402 1.5E-5 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 Gene3D G3DSA:3.10.290.10 330 401 9.3E-17 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 1.0E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 49 71 1.0E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 1.0E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Acife_3092 c2311052f5916392cf2d1b631a01b7f3 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 1.0E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Acife_0651 42bd2ae28a5f5bec0026528c6e974c3c 288 SMART SM01092 178 281 2.3E-17 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Acife_0651 42bd2ae28a5f5bec0026528c6e974c3c 288 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 180 278 6.4E-17 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Acife_0651 42bd2ae28a5f5bec0026528c6e974c3c 288 Gene3D G3DSA:3.30.390.50 177 284 3.0E-19 T 12-10-2018 Acife_0651 42bd2ae28a5f5bec0026528c6e974c3c 288 SUPERFAMILY SSF56176 3 169 1.01E-46 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Acife_0651 42bd2ae28a5f5bec0026528c6e974c3c 288 Gene3D G3DSA:3.30.465.10 1 172 1.8E-51 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Acife_0651 42bd2ae28a5f5bec0026528c6e974c3c 288 SUPERFAMILY SSF55447 178 281 2.62E-19 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Acife_0651 42bd2ae28a5f5bec0026528c6e974c3c 288 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 169 5.1E-43 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Acife_1302 231acdc68eeb3073da8cb5dfc085e4a7 391 Pfam PF13288 DXP reductoisomerase C-terminal domain 261 377 1.5E-40 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Acife_1302 231acdc68eeb3073da8cb5dfc085e4a7 391 Gene3D G3DSA:3.40.50.720 1 152 4.0E-50 T 12-10-2018 Acife_1302 231acdc68eeb3073da8cb5dfc085e4a7 391 Gene3D G3DSA:1.10.1740.10 302 387 1.5E-27 T 12-10-2018 Acife_1302 231acdc68eeb3073da8cb5dfc085e4a7 391 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 383 4.9E-156 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Acife_1302 231acdc68eeb3073da8cb5dfc085e4a7 391 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 148 229 3.7E-40 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Acife_1302 231acdc68eeb3073da8cb5dfc085e4a7 391 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 134 1.2E-43 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Acife_1302 231acdc68eeb3073da8cb5dfc085e4a7 391 SUPERFAMILY SSF55347 128 264 3.6E-62 T 12-10-2018 Acife_1302 231acdc68eeb3073da8cb5dfc085e4a7 391 SUPERFAMILY SSF69055 293 383 2.09E-29 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Acife_1302 231acdc68eeb3073da8cb5dfc085e4a7 391 SUPERFAMILY SSF51735 3 152 3.85E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1302 231acdc68eeb3073da8cb5dfc085e4a7 391 PIRSF PIRSF006205 2 388 1.4E-150 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Acife_1302 231acdc68eeb3073da8cb5dfc085e4a7 391 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 382 45.88 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Acife_3190 bbebd371266921264e0b745c26fb0b71 469 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 136 348 1.8E-64 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_3190 bbebd371266921264e0b745c26fb0b71 469 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 11 466 1.9E-247 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Acife_3190 bbebd371266921264e0b745c26fb0b71 469 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_3190 bbebd371266921264e0b745c26fb0b71 469 Gene3D G3DSA:1.10.1140.10 351 469 7.1E-60 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_3190 bbebd371266921264e0b745c26fb0b71 469 SUPERFAMILY SSF50615 11 81 3.66E-22 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_3190 bbebd371266921264e0b745c26fb0b71 469 SUPERFAMILY SSF52540 83 354 1.21E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3190 bbebd371266921264e0b745c26fb0b71 469 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 14 79 4.5E-19 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_3190 bbebd371266921264e0b745c26fb0b71 469 SMART SM00382 148 411 1.1E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_3190 bbebd371266921264e0b745c26fb0b71 469 Gene3D G3DSA:3.40.50.300 82 350 5.1E-111 T 12-10-2018 Acife_3190 bbebd371266921264e0b745c26fb0b71 469 SUPERFAMILY SSF47917 351 467 5.49E-54 T 12-10-2018 Acife_3190 bbebd371266921264e0b745c26fb0b71 469 Hamap MF_01347 ATP synthase subunit beta [atpB]. 9 466 56.06 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Acife_3190 bbebd371266921264e0b745c26fb0b71 469 Gene3D G3DSA:2.40.10.170 9 81 2.8E-25 T 12-10-2018 Acife_1426 29c99724704151ac555f2dfa5c51f50a 429 SMART SM00788 4 424 7.4E-292 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Acife_1426 29c99724704151ac555f2dfa5c51f50a 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Acife_1426 29c99724704151ac555f2dfa5c51f50a 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Acife_1426 29c99724704151ac555f2dfa5c51f50a 429 Gene3D G3DSA:3.40.440.10 6 249 1.0E-96 T 12-10-2018 Acife_1426 29c99724704151ac555f2dfa5c51f50a 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 204.7 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Acife_1426 29c99724704151ac555f2dfa5c51f50a 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 428 1.0E-169 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Acife_1426 29c99724704151ac555f2dfa5c51f50a 429 SUPERFAMILY SSF52540 3 427 2.97E-170 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1426 29c99724704151ac555f2dfa5c51f50a 429 Pfam PF00709 Adenylosuccinate synthetase 5 423 1.4E-174 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Acife_1426 29c99724704151ac555f2dfa5c51f50a 429 Gene3D G3DSA:3.90.170.10 267 429 1.5E-65 T 12-10-2018 Acife_1426 29c99724704151ac555f2dfa5c51f50a 429 Gene3D G3DSA:1.10.300.10 102 201 1.0E-96 T 12-10-2018 Acife_1631 d0a15fc4349ea1e7c792b9358d0116e5 546 Gene3D G3DSA:3.40.109.10 276 512 6.9E-39 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Acife_1631 d0a15fc4349ea1e7c792b9358d0116e5 546 Gene3D G3DSA:3.40.109.10 33 241 1.6E-55 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Acife_1631 d0a15fc4349ea1e7c792b9358d0116e5 546 SUPERFAMILY SSF55469 74 221 8.11E-9 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Acife_1631 d0a15fc4349ea1e7c792b9358d0116e5 546 Pfam PF00881 Nitroreductase family 73 220 8.6E-6 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Acife_1631 d0a15fc4349ea1e7c792b9358d0116e5 546 SUPERFAMILY SSF55469 413 525 2.36E-11 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Acife_0622 21cfff35245aaabcbbb08444c5a31af5 363 Hamap MF_00493 Transaldolase [tal]. 1 363 120.05 T 12-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Acife_0622 21cfff35245aaabcbbb08444c5a31af5 363 Gene3D G3DSA:3.20.20.70 3 362 1.9E-128 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_0622 21cfff35245aaabcbbb08444c5a31af5 363 PIRSF PIRSF036915 1 362 2.6E-124 T 12-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Acife_0622 21cfff35245aaabcbbb08444c5a31af5 363 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 16 357 7.9E-71 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Acife_0622 21cfff35245aaabcbbb08444c5a31af5 363 SUPERFAMILY SSF51569 8 359 2.44E-63 T 12-10-2018 Acife_0622 21cfff35245aaabcbbb08444c5a31af5 363 TIGRFAM TIGR00876 tal_mycobact: transaldolase 14 357 2.2E-83 T 12-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Acife_0622 21cfff35245aaabcbbb08444c5a31af5 363 ProSitePatterns PS01054 Transaldolase signature 1. 42 50 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 9 385 6.3E-128 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 PRINTS PR00143 Citrate synthase signature 256 276 1.8E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 PRINTS PR00143 Citrate synthase signature 181 196 1.8E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 PRINTS PR00143 Citrate synthase signature 338 352 1.8E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 PRINTS PR00143 Citrate synthase signature 132 145 1.8E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 PRINTS PR00143 Citrate synthase signature 203 231 1.8E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 PRINTS PR00143 Citrate synthase signature 318 334 1.8E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 Gene3D G3DSA:1.10.580.10 21 357 2.1E-122 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 SUPERFAMILY SSF48256 7 385 9.55E-127 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 Gene3D G3DSA:1.10.230.10 229 332 2.1E-122 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 Pfam PF00285 Citrate synthase, C-terminal domain 9 368 5.3E-124 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 Acife_3078 e3cd8e05cae3a63d70b79b0515e5db2b 386 PIRSF PIRSF001369 1 386 2.1E-141 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 SMART SM00881 4 100 6.4E-37 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 PIRSF PIRSF001553 1 290 7.7E-130 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 6.3E-141 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 Pfam PF02629 CoA binding domain 7 99 2.9E-30 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 SUPERFAMILY SSF52210 123 286 5.23E-54 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 Gene3D G3DSA:3.40.50.261 124 289 2.3E-71 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.7E-35 T 12-10-2018 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.7E-35 T 12-10-2018 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.7E-35 T 12-10-2018 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.7E-35 T 12-10-2018 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 42.297 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 Pfam PF00549 CoA-ligase 151 271 1.7E-19 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 SUPERFAMILY SSF51735 1 122 6.02E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Acife_0630 2a8f0df9f740b56e200452ae460b248b 290 Gene3D G3DSA:3.40.50.720 2 123 2.5E-50 T 12-10-2018 Acife_2811 e5920dfa7bfd215ae2115f8a7cf0404f 321 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 11 316 35.518 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Acife_2811 e5920dfa7bfd215ae2115f8a7cf0404f 321 Gene3D G3DSA:1.10.150.170 121 223 2.1E-92 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Acife_2811 e5920dfa7bfd215ae2115f8a7cf0404f 321 PIRSF PIRSF004486 5 317 1.8E-91 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Acife_2811 e5920dfa7bfd215ae2115f8a7cf0404f 321 Gene3D G3DSA:3.40.50.150 11 314 2.1E-92 T 12-10-2018 Acife_2811 e5920dfa7bfd215ae2115f8a7cf0404f 321 SUPERFAMILY SSF53335 11 315 5.08E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2811 e5920dfa7bfd215ae2115f8a7cf0404f 321 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 9 315 4.5E-93 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Acife_2811 e5920dfa7bfd215ae2115f8a7cf0404f 321 SUPERFAMILY SSF81799 123 222 2.88E-33 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Acife_2811 e5920dfa7bfd215ae2115f8a7cf0404f 321 Pfam PF01795 MraW methylase family 9 315 1.8E-97 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Acife_1238 6e0b19080197e9e912fad40c951ad8b6 265 SUPERFAMILY SSF53335 39 233 5.69E-38 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_1238 6e0b19080197e9e912fad40c951ad8b6 265 Pfam PF01564 Spermine/spermidine synthase domain 56 178 2.0E-6 T 12-10-2018 Acife_1238 6e0b19080197e9e912fad40c951ad8b6 265 Gene3D G3DSA:3.40.50.150 24 249 1.4E-41 T 12-10-2018 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 Pfam PF00342 Phosphoglucose isomerase 50 530 4.0E-202 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 487 504 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 44 514 39.881 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 SUPERFAMILY SSF53697 5 537 1.22E-196 T 12-10-2018 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 Gene3D G3DSA:1.10.1390.10 497 537 4.2E-16 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 148 167 1.1E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 487 500 1.1E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 1.1E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 455 473 1.1E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 473 487 1.1E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 1.1E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 Gene3D G3DSA:3.40.50.10490 11 496 3.4E-224 T 12-10-2018 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0223 5631ef2dcdbfe2ec1bdcf87313dd2765 541 Gene3D G3DSA:3.40.50.10490 96 289 3.4E-224 T 12-10-2018 Acife_0579 19797ea6bde460d07f64dbf73b26d592 462 Pfam PF10996 Beta-Casp domain 254 380 9.9E-27 T 12-10-2018 IPR022712 Beta-Casp domain Acife_0579 19797ea6bde460d07f64dbf73b26d592 462 SUPERFAMILY SSF56281 1 458 6.42E-131 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_0579 19797ea6bde460d07f64dbf73b26d592 462 SMART SM00849 13 238 1.3E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_0579 19797ea6bde460d07f64dbf73b26d592 462 Pfam PF00753 Metallo-beta-lactamase superfamily 10 118 4.2E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_0579 19797ea6bde460d07f64dbf73b26d592 462 Gene3D G3DSA:3.40.50.10890 222 406 3.1E-144 T 12-10-2018 Acife_0579 19797ea6bde460d07f64dbf73b26d592 462 Gene3D G3DSA:3.60.15.10 6 435 3.1E-144 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_0579 19797ea6bde460d07f64dbf73b26d592 462 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 394 454 3.4E-13 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Acife_0579 19797ea6bde460d07f64dbf73b26d592 462 SMART SM01027 254 380 2.1E-58 T 12-10-2018 IPR022712 Beta-Casp domain Acife_2099 90634259eb25ac5f3d82be1175affe73 204 SUPERFAMILY SSF64005 6 198 2.88E-41 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Acife_2099 90634259eb25ac5f3d82be1175affe73 204 Gene3D G3DSA:3.40.1180.10 1 135 4.6E-22 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Acife_2099 90634259eb25ac5f3d82be1175affe73 204 Gene3D G3DSA:3.40.1180.10 137 204 3.9E-17 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Acife_2099 90634259eb25ac5f3d82be1175affe73 204 Pfam PF01255 Putative undecaprenyl diphosphate synthase 13 133 1.8E-16 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Acife_2099 90634259eb25ac5f3d82be1175affe73 204 Pfam PF01255 Putative undecaprenyl diphosphate synthase 145 203 5.4E-16 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Acife_2390 bc2a0f891f231047494cdee33b4c2d54 164 SUPERFAMILY SSF51206 11 136 2.09E-24 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Acife_2390 bc2a0f891f231047494cdee33b4c2d54 164 SMART SM00100 18 137 5.5E-7 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Acife_2390 bc2a0f891f231047494cdee33b4c2d54 164 Gene3D G3DSA:2.60.120.10 7 150 2.9E-24 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_2390 bc2a0f891f231047494cdee33b4c2d54 164 Pfam PF00027 Cyclic nucleotide-binding domain 38 121 3.3E-14 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Acife_0071 7bbabcca010cbf27417112585ff92212 252 Gene3D G3DSA:3.40.1410.10 84 250 1.9E-39 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Acife_0071 7bbabcca010cbf27417112585ff92212 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 9.1E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Acife_0071 7bbabcca010cbf27417112585ff92212 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 9.1E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Acife_0071 7bbabcca010cbf27417112585ff92212 252 SUPERFAMILY SSF46785 13 90 2.27E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0071 7bbabcca010cbf27417112585ff92212 252 SMART SM00345 21 80 4.3E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Acife_0071 7bbabcca010cbf27417112585ff92212 252 SMART SM00866 101 240 3.4E-32 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Acife_0071 7bbabcca010cbf27417112585ff92212 252 Pfam PF07702 UTRA domain 103 239 2.1E-29 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Acife_0071 7bbabcca010cbf27417112585ff92212 252 Gene3D G3DSA:1.10.10.10 16 83 2.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0071 7bbabcca010cbf27417112585ff92212 252 SUPERFAMILY SSF64288 68 248 1.24E-40 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Acife_0071 7bbabcca010cbf27417112585ff92212 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 1.8E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Acife_1074 af97e0564838073add352453924f33a8 122 SMART SM00960 6 96 9.1E-5 T 12-10-2018 IPR004942 Roadblock/LAMTOR2 domain Acife_1074 af97e0564838073add352453924f33a8 122 SUPERFAMILY SSF103196 6 101 2.22E-8 T 12-10-2018 Acife_1074 af97e0564838073add352453924f33a8 122 Gene3D G3DSA:3.30.450.30 5 121 6.1E-10 T 12-10-2018 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 Pfam PF01751 Toprim domain 418 530 2.6E-17 T 12-10-2018 IPR006171 TOPRIM domain Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 Pfam PF00204 DNA gyrase B 220 389 9.0E-57 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 800 100.801 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 SMART SM00387 31 175 5.5E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 800 8.7E-303 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 SMART SM00433 35 793 8.5E-271 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 ProSitePatterns PS00177 DNA topoisomerase II signature. 421 429 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 Gene3D G3DSA:3.30.230.10 220 391 2.1E-70 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 728 789 3.5E-30 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 SUPERFAMILY SSF54211 220 390 1.01E-57 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 Gene3D G3DSA:3.40.50.670 397 583 1.5E-75 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR01159 DNA gyrase subunit B signature 469 478 3.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR01159 DNA gyrase subunit B signature 769 785 3.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR01159 DNA gyrase subunit B signature 373 393 3.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR01159 DNA gyrase subunit B signature 753 765 3.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR01159 DNA gyrase subunit B signature 311 327 3.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR01159 DNA gyrase subunit B signature 195 208 3.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR01159 DNA gyrase subunit B signature 180 195 3.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR01159 DNA gyrase subunit B signature 359 373 3.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR01159 DNA gyrase subunit B signature 5 15 3.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR01159 DNA gyrase subunit B signature 219 241 3.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 SUPERFAMILY SSF56719 393 791 1.33E-86 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR00418 DNA topoisomerase II family signature 486 502 4.0E-72 T 12-10-2018 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.0E-72 T 12-10-2018 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR00418 DNA topoisomerase II family signature 267 280 4.0E-72 T 12-10-2018 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR00418 DNA topoisomerase II family signature 419 433 4.0E-72 T 12-10-2018 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR00418 DNA topoisomerase II family signature 504 521 4.0E-72 T 12-10-2018 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR00418 DNA topoisomerase II family signature 524 536 4.0E-72 T 12-10-2018 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.0E-72 T 12-10-2018 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.0E-72 T 12-10-2018 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 PRINTS PR00418 DNA topoisomerase II family signature 732 748 4.0E-72 T 12-10-2018 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 SUPERFAMILY SSF55874 5 217 1.44E-72 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 Gene3D G3DSA:3.40.50.670 699 799 1.2E-25 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 171 1.4E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0004 1044f529587a767e5f1bcdbbeebc4064 800 Gene3D G3DSA:3.30.565.10 3 219 6.6E-90 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0797 8554f979069a1eed2c3a5912d969c264 835 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 536 652 3.9E-27 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 94 347 1.3E-45 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 322 328 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 Gene3D G3DSA:2.70.150.10 101 206 1.8E-25 T 12-10-2018 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 TIGRFAM TIGR01647 ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 33 771 1.2E-290 T 12-10-2018 IPR006534 P-type ATPase, subfamily IIIA GO:0008553|GO:0016021|GO:0120029 KEGG: 00190+3.6.3.6 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 Gene3D G3DSA:3.40.1110.10 340 463 2.8E-29 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 171 185 4.9E-39 T 12-10-2018 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 320 334 4.9E-39 T 12-10-2018 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 599 4.9E-39 T 12-10-2018 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 473 4.9E-39 T 12-10-2018 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 484 494 4.9E-39 T 12-10-2018 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 564 583 4.9E-39 T 12-10-2018 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 Gene3D G3DSA:1.20.1110.10 207 339 4.6E-30 T 12-10-2018 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 Gene3D G3DSA:1.20.1110.10 545 809 9.1E-64 T 12-10-2018 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 Pfam PF00702 haloacid dehalogenase-like hydrolase 316 577 3.9E-21 T 12-10-2018 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 Pfam PF00122 E1-E2 ATPase 123 299 1.2E-52 T 12-10-2018 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 SUPERFAMILY SSF56784 318 658 7.76E-41 T 12-10-2018 IPR036412 HAD-like superfamily Acife_0797 8554f979069a1eed2c3a5912d969c264 835 SUPERFAMILY SSF81653 125 221 7.72E-29 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 SUPERFAMILY SSF81665 15 809 1.31E-86 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 SMART SM00831 14 86 2.5E-19 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 595 620 5.5E-39 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 726 747 5.5E-39 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 536 552 5.5E-39 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 564 580 5.5E-39 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 432 450 5.5E-39 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 Pfam PF00690 Cation transporter/ATPase, N-terminus 17 81 1.1E-16 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Acife_0797 8554f979069a1eed2c3a5912d969c264 835 Gene3D G3DSA:3.40.50.1000 464 538 4.0E-8 T 12-10-2018 IPR023214 HAD superfamily Acife_1237 adc7cf48f620b6194a68e20444b9879a 278 SUPERFAMILY SSF88713 65 241 2.97E-35 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Acife_1237 adc7cf48f620b6194a68e20444b9879a 278 Gene3D G3DSA:3.20.20.370 43 272 1.5E-62 T 12-10-2018 Acife_1237 adc7cf48f620b6194a68e20444b9879a 278 Pfam PF01522 Polysaccharide deacetylase 103 237 1.7E-25 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Acife_1541 904d7ff1feef177f225e27784bf1b9d9 108 Gene3D G3DSA:2.30.30.110 1 107 2.7E-37 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Acife_1541 904d7ff1feef177f225e27784bf1b9d9 108 SUPERFAMILY SSF50118 1 107 5.23E-30 T 12-10-2018 Acife_1541 904d7ff1feef177f225e27784bf1b9d9 108 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 107 5.4E-22 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Acife_2723 10505380a8a01d1a506103a3e5b67e5f 116 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 60 88 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Acife_2723 10505380a8a01d1a506103a3e5b67e5f 116 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 60 112 1.4E-13 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Acife_2723 10505380a8a01d1a506103a3e5b67e5f 116 Hamap MF_00422 Protein translocase subunit SecE [secE]. 55 110 11.19 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Acife_2723 10505380a8a01d1a506103a3e5b67e5f 116 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 60 111 2.6E-15 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Acife_2723 10505380a8a01d1a506103a3e5b67e5f 116 PRINTS PR01650 Bacterial translocase SecE signature 78 98 1.3E-14 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Acife_2723 10505380a8a01d1a506103a3e5b67e5f 116 PRINTS PR01650 Bacterial translocase SecE signature 33 54 1.3E-14 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Acife_2723 10505380a8a01d1a506103a3e5b67e5f 116 PRINTS PR01650 Bacterial translocase SecE signature 54 74 1.3E-14 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Acife_2723 10505380a8a01d1a506103a3e5b67e5f 116 PRINTS PR01650 Bacterial translocase SecE signature 98 114 1.3E-14 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Acife_2723 10505380a8a01d1a506103a3e5b67e5f 116 Gene3D G3DSA:1.20.5.1030 55 111 2.3E-15 T 12-10-2018 IPR038379 SecE superfamily Acife_2758 d9eafac2ce887694166243d7cdb02939 165 SUPERFAMILY SSF52255 5 158 8.11E-63 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Acife_2758 d9eafac2ce887694166243d7cdb02939 165 Pfam PF00731 AIR carboxylase 6 152 3.7E-61 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Acife_2758 d9eafac2ce887694166243d7cdb02939 165 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 159 31.028 T 12-10-2018 IPR033747 Class I PurE Acife_2758 d9eafac2ce887694166243d7cdb02939 165 SMART SM01001 4 155 9.7E-95 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Acife_2758 d9eafac2ce887694166243d7cdb02939 165 Gene3D G3DSA:3.40.50.7700 1 164 2.1E-69 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Acife_2758 d9eafac2ce887694166243d7cdb02939 165 PIRSF PIRSF001338 1 162 3.2E-63 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Acife_2758 d9eafac2ce887694166243d7cdb02939 165 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 157 9.3E-62 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Acife_0780 94bbf562d4264522978aeb304f2cfb34 275 Pfam PF07728 AAA domain (dynein-related subfamily) 40 174 2.6E-32 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Acife_0780 94bbf562d4264522978aeb304f2cfb34 275 Gene3D G3DSA:3.40.50.300 25 192 6.1E-29 T 12-10-2018 Acife_0780 94bbf562d4264522978aeb304f2cfb34 275 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 187 269 1.2E-26 T 12-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Acife_0780 94bbf562d4264522978aeb304f2cfb34 275 SUPERFAMILY SSF52540 30 229 5.7E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3034 0340a9f4291283f192b11f8724930afd 113 Gene3D G3DSA:2.30.30.110 1 113 5.8E-44 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Acife_3034 0340a9f4291283f192b11f8724930afd 113 SUPERFAMILY SSF50118 5 109 5.67E-30 T 12-10-2018 Acife_3034 0340a9f4291283f192b11f8724930afd 113 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 9 104 1.9E-22 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Acife_0178 05e2efdbfa6c27dfa69d186bc841e12c 526 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 324 411 3.7E-11 T 12-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Acife_0178 05e2efdbfa6c27dfa69d186bc841e12c 526 Gene3D G3DSA:3.30.950.30 7 151 3.0E-24 T 12-10-2018 IPR038461 Schlafen, AAA domain superfamily Acife_0178 05e2efdbfa6c27dfa69d186bc841e12c 526 Pfam PF04326 Putative DNA-binding domain 17 146 3.7E-10 T 12-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Acife_0178 05e2efdbfa6c27dfa69d186bc841e12c 526 Gene3D G3DSA:3.30.565.60 255 411 6.3E-22 T 12-10-2018 IPR038475 RecG, C-terminal domain superfamily Acife_1289 ab0d66e31cd748efa0e1132571f62048 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 321 1.6E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Acife_1289 ab0d66e31cd748efa0e1132571f62048 340 Gene3D G3DSA:1.10.3720.10 91 334 2.7E-30 T 12-10-2018 IPR035906 MetI-like superfamily Acife_1289 ab0d66e31cd748efa0e1132571f62048 340 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 38 330 2.3E-92 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Acife_1289 ab0d66e31cd748efa0e1132571f62048 340 SUPERFAMILY SSF161098 47 324 5.89E-32 T 12-10-2018 IPR035906 MetI-like superfamily Acife_1503 b7c77c30d7b51666103a9ea56c5d0965 199 SMART SM00493 80 165 3.9E-15 T 12-10-2018 IPR006171 TOPRIM domain Acife_1503 b7c77c30d7b51666103a9ea56c5d0965 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Acife_1503 b7c77c30d7b51666103a9ea56c5d0965 199 Pfam PF02132 RecR protein 42 78 8.5E-14 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Acife_1503 b7c77c30d7b51666103a9ea56c5d0965 199 Pfam PF13662 Toprim domain 81 170 9.6E-19 T 12-10-2018 IPR006171 TOPRIM domain Acife_1503 b7c77c30d7b51666103a9ea56c5d0965 199 Gene3D G3DSA:3.40.1360.10 77 196 3.4E-38 T 12-10-2018 Acife_1503 b7c77c30d7b51666103a9ea56c5d0965 199 Gene3D G3DSA:1.10.8.420 1 52 1.6E-13 T 12-10-2018 Acife_1503 b7c77c30d7b51666103a9ea56c5d0965 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 87.009 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Acife_1503 b7c77c30d7b51666103a9ea56c5d0965 199 TIGRFAM TIGR00615 recR: recombination protein RecR 6 195 6.9E-68 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Acife_1503 b7c77c30d7b51666103a9ea56c5d0965 199 SUPERFAMILY SSF111304 5 197 1.44E-64 T 12-10-2018 IPR023627 Recombination protein RecR Acife_2709 8cc2373baebdb21b8894740506af2adf 205 SUPERFAMILY SSF52166 1 204 8.37E-60 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Acife_2709 8cc2373baebdb21b8894740506af2adf 205 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 205 27.378 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2709 8cc2373baebdb21b8894740506af2adf 205 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 200 1.2E-59 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2709 8cc2373baebdb21b8894740506af2adf 205 Pfam PF00573 Ribosomal protein L4/L1 family 16 202 8.4E-49 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Acife_2709 8cc2373baebdb21b8894740506af2adf 205 Gene3D G3DSA:3.40.1370.10 2 205 1.3E-56 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Acife_1174 e96fe2339459faf763ffe4326fd25aaf 182 Gene3D G3DSA:2.60.120.10 1 170 2.3E-58 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_1174 e96fe2339459faf763ffe4326fd25aaf 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 172 5.0E-62 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Acife_1174 e96fe2339459faf763ffe4326fd25aaf 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 172 1.0E-55 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Acife_1174 e96fe2339459faf763ffe4326fd25aaf 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 171 4.6E-50 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Acife_1174 e96fe2339459faf763ffe4326fd25aaf 182 SUPERFAMILY SSF51182 1 180 1.09E-60 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Acife_1494 2911730653f2b38566772e46b362f6de 156 Pfam PF01252 Signal peptidase (SPase) II 10 147 4.3E-27 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_1494 2911730653f2b38566772e46b362f6de 156 ProSitePatterns PS00855 Signal peptidases II signature. 97 109 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_1494 2911730653f2b38566772e46b362f6de 156 TIGRFAM TIGR00077 lspA: signal peptidase II 6 145 2.4E-24 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_1494 2911730653f2b38566772e46b362f6de 156 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 156 12.275 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_1494 2911730653f2b38566772e46b362f6de 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 131 147 3.1E-12 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_1494 2911730653f2b38566772e46b362f6de 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 94 109 3.1E-12 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_1494 2911730653f2b38566772e46b362f6de 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 50 58 3.1E-12 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_0596 268e1058b103ca33cc60d500146da01d 358 Pfam PF01883 Iron-sulfur cluster assembly protein 6 63 4.6E-6 T 12-10-2018 IPR002744 MIP18 family-like Acife_0596 268e1058b103ca33cc60d500146da01d 358 ProSitePatterns PS01215 Mrp family signature. 199 215 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 Acife_0596 268e1058b103ca33cc60d500146da01d 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 88 340 39.326 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Acife_0596 268e1058b103ca33cc60d500146da01d 358 Gene3D G3DSA:3.40.50.300 81 335 3.8E-89 T 12-10-2018 Acife_0596 268e1058b103ca33cc60d500146da01d 358 SUPERFAMILY SSF52540 95 340 2.43E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0596 268e1058b103ca33cc60d500146da01d 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 93 335 2.7E-106 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Acife_0596 268e1058b103ca33cc60d500146da01d 358 SUPERFAMILY SSF117916 4 74 4.25E-7 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Acife_0375 f014620a0c2a6ff7ba81ffad059c79bb 105 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 11 89 1.1E-31 T 12-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 Acife_0375 f014620a0c2a6ff7ba81ffad059c79bb 105 SUPERFAMILY SSF47413 15 98 5.96E-23 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_0375 f014620a0c2a6ff7ba81ffad059c79bb 105 Gene3D G3DSA:1.10.260.40 6 105 9.0E-29 T 12-10-2018 Acife_1848 6cafb10faff38ef8a858aea6ce91d390 121 SUPERFAMILY SSF75169 1 105 1.45E-10 T 12-10-2018 IPR027396 DsrEFH-like Acife_1848 6cafb10faff38ef8a858aea6ce91d390 121 Gene3D G3DSA:3.40.1260.10 1 119 8.1E-12 T 12-10-2018 IPR027396 DsrEFH-like Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 SMART SM00052 493 738 2.4E-100 T 12-10-2018 IPR001633 EAL domain Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 Gene3D G3DSA:3.20.20.450 495 749 6.9E-89 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 Gene3D G3DSA:3.30.70.270 317 486 9.8E-53 T 12-10-2018 Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 SUPERFAMILY SSF141868 500 745 3.27E-79 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 Pfam PF00563 EAL domain 500 733 1.5E-69 T 12-10-2018 IPR001633 EAL domain Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 SUPERFAMILY SSF46458 7 140 1.12E-18 T 12-10-2018 IPR009050 Globin-like superfamily Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 SMART SM00267 311 483 2.9E-59 T 12-10-2018 IPR000160 GGDEF domain Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 SUPERFAMILY SSF55073 327 482 4.87E-47 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 318 481 8.6E-38 T 12-10-2018 IPR000160 GGDEF domain Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 Gene3D G3DSA:1.10.490.10 4 158 1.0E-27 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 479 2.5E-44 T 12-10-2018 IPR000160 GGDEF domain Acife_0734 8e1a01b7b9bc9e178908c446795662a0 885 Pfam PF11563 Protoglobin 7 156 1.9E-21 T 12-10-2018 Acife_3118 c2b73494b1939fc0bd04b025da110f9c 142 Pfam PF01878 EVE domain 4 134 3.9E-16 T 12-10-2018 IPR002740 EVE domain Acife_3118 c2b73494b1939fc0bd04b025da110f9c 142 SUPERFAMILY SSF88697 3 136 1.24E-30 T 12-10-2018 IPR015947 PUA-like superfamily Acife_3118 c2b73494b1939fc0bd04b025da110f9c 142 Gene3D G3DSA:3.10.590.10 2 134 1.7E-28 T 12-10-2018 Acife_3118 c2b73494b1939fc0bd04b025da110f9c 142 Hamap MF_00771 UPF0310 protein . 2 136 28.352 T 12-10-2018 IPR022996 Uncharacterised protein family UPF0310 Acife_1481 c2b73494b1939fc0bd04b025da110f9c 142 Pfam PF01878 EVE domain 4 134 3.9E-16 T 12-10-2018 IPR002740 EVE domain Acife_1481 c2b73494b1939fc0bd04b025da110f9c 142 SUPERFAMILY SSF88697 3 136 1.24E-30 T 12-10-2018 IPR015947 PUA-like superfamily Acife_1481 c2b73494b1939fc0bd04b025da110f9c 142 Gene3D G3DSA:3.10.590.10 2 134 1.7E-28 T 12-10-2018 Acife_1481 c2b73494b1939fc0bd04b025da110f9c 142 Hamap MF_00771 UPF0310 protein . 2 136 28.352 T 12-10-2018 IPR022996 Uncharacterised protein family UPF0310 Acife_1349 8df96dfb3dd3c99d084e543834b83e7b 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.3E-14 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Acife_1349 8df96dfb3dd3c99d084e543834b83e7b 53 PIRSF PIRSF036466 1 53 3.1E-20 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Acife_1349 8df96dfb3dd3c99d084e543834b83e7b 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 53 20.051 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Acife_0609 1810059487e6447b724635ea5fc936fd 1712 Pfam PF00128 Alpha amylase, catalytic domain 771 865 1.9E-13 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Acife_0609 1810059487e6447b724635ea5fc936fd 1712 Pfam PF02446 4-alpha-glucanotransferase 189 711 1.2E-117 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Acife_0609 1810059487e6447b724635ea5fc936fd 1712 Gene3D G3DSA:1.10.10.470 1382 1486 8.9E-31 T 12-10-2018 Acife_0609 1810059487e6447b724635ea5fc936fd 1712 SUPERFAMILY SSF51445 748 1596 8.52E-127 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Acife_0609 1810059487e6447b724635ea5fc936fd 1712 Gene3D G3DSA:3.20.20.80 751 838 2.5E-18 T 12-10-2018 Acife_0609 1810059487e6447b724635ea5fc936fd 1712 Gene3D G3DSA:3.20.20.80 1487 1599 1.2E-32 T 12-10-2018 Acife_0609 1810059487e6447b724635ea5fc936fd 1712 Gene3D G3DSA:3.20.20.80 1033 1200 4.6E-32 T 12-10-2018 Acife_0609 1810059487e6447b724635ea5fc936fd 1712 SUPERFAMILY SSF51445 173 730 5.23E-145 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Acife_0609 1810059487e6447b724635ea5fc936fd 1712 Gene3D G3DSA:3.30.1590.10 839 942 8.9E-22 T 12-10-2018 Acife_0609 1810059487e6447b724635ea5fc936fd 1712 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 146 728 9.1E-140 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Acife_0609 1810059487e6447b724635ea5fc936fd 1712 SMART SM00642 759 1327 9.3E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Acife_0609 1810059487e6447b724635ea5fc936fd 1712 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 749 1701 3.8E-293 T 12-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 Acife_2669 497476d183ece5998dd6d34dc545607f 372 Pfam PF12710 haloacid dehalogenase-like hydrolase 165 333 2.9E-19 T 12-10-2018 Acife_2669 497476d183ece5998dd6d34dc545607f 372 Gene3D G3DSA:3.40.50.1000 112 367 1.3E-70 T 12-10-2018 IPR023214 HAD superfamily Acife_2669 497476d183ece5998dd6d34dc545607f 372 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 164 334 9.2E-30 T 12-10-2018 Acife_2669 497476d183ece5998dd6d34dc545607f 372 SUPERFAMILY SSF56784 163 367 4.94E-47 T 12-10-2018 IPR036412 HAD-like superfamily Acife_2669 497476d183ece5998dd6d34dc545607f 372 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 248 258 6.1E-5 T 12-10-2018 Acife_2669 497476d183ece5998dd6d34dc545607f 372 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 322 341 6.1E-5 T 12-10-2018 Acife_2669 497476d183ece5998dd6d34dc545607f 372 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 162 357 2.7E-67 T 12-10-2018 Acife_2761 3175800e6bf45c100c3bfc9fdde2d7ec 390 Gene3D G3DSA:3.90.550.10 28 284 1.8E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2761 3175800e6bf45c100c3bfc9fdde2d7ec 390 TIGRFAM TIGR03469 HpnB: hopene-associated glycosyltransferase HpnB 7 383 1.3E-167 T 12-10-2018 IPR017832 Glycosyl transferase, family 2, hopene-associated, HpnB Acife_2761 3175800e6bf45c100c3bfc9fdde2d7ec 390 SUPERFAMILY SSF53448 44 291 5.87E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2761 3175800e6bf45c100c3bfc9fdde2d7ec 390 Pfam PF00535 Glycosyl transferase family 2 50 225 1.9E-20 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_0248 751d78b21cd9367b76d26f62ec429441 438 SUPERFAMILY SSF111352 35 418 1.24E-130 T 12-10-2018 Acife_0248 751d78b21cd9367b76d26f62ec429441 438 Gene3D G3DSA:1.10.3430.10 20 438 3.6E-143 T 12-10-2018 IPR029020 Ammonium/urea transporter Acife_0248 751d78b21cd9367b76d26f62ec429441 438 TIGRFAM TIGR00836 amt: ammonium transporter 39 437 1.8E-138 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Acife_0248 751d78b21cd9367b76d26f62ec429441 438 ProSitePatterns PS01219 Ammonium transporters signature. 194 219 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Acife_0248 751d78b21cd9367b76d26f62ec429441 438 Pfam PF00909 Ammonium Transporter Family 41 437 3.0E-123 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Acife_1246 5e644dba4b551f9a71f9850403175829 225 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 64 196 1.0E-30 T 12-10-2018 Acife_2708 79a42b07f4522534d369099715900977 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 21.301 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Acife_2708 79a42b07f4522534d369099715900977 97 Gene3D G3DSA:3.30.70.330 1 96 1.1E-33 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Acife_2708 79a42b07f4522534d369099715900977 97 SUPERFAMILY SSF54189 2 92 1.01E-30 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2708 79a42b07f4522534d369099715900977 97 Pfam PF00276 Ribosomal protein L23 9 93 1.1E-32 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 Gene3D G3DSA:1.20.1640.10 528 1078 2.7E-231 T 12-10-2018 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 SUPERFAMILY SSF82714 193 272 4.05E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 SUPERFAMILY SSF82693 603 713 1.67E-11 T 12-10-2018 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 Gene3D G3DSA:1.20.1640.10 23 527 2.7E-231 T 12-10-2018 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 SUPERFAMILY SSF82693 144 344 1.99E-12 T 12-10-2018 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 Gene3D G3DSA:3.30.70.1430 50 859 2.7E-231 T 12-10-2018 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 Pfam PF00873 AcrB/AcrD/AcrF family 19 1079 3.6E-149 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 Gene3D G3DSA:3.30.2090.10 761 851 2.7E-231 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 9.8E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 9.8E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 9.8E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 PRINTS PR00702 Acriflavin resistance protein family signature 486 509 9.8E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 9.8E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 PRINTS PR00702 Acriflavin resistance protein family signature 20 44 9.8E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 SUPERFAMILY SSF82866 854 1086 8.37E-46 T 12-10-2018 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 Gene3D G3DSA:3.30.70.1320 142 346 2.7E-231 T 12-10-2018 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 Gene3D G3DSA:3.30.2090.10 188 284 2.7E-231 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 Gene3D G3DSA:3.30.70.1430 602 712 2.7E-231 T 12-10-2018 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 SUPERFAMILY SSF82714 760 847 2.88E-8 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 Gene3D G3DSA:3.30.70.1440 713 928 2.7E-231 T 12-10-2018 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 SUPERFAMILY SSF82693 50 143 2.27E-15 T 12-10-2018 Acife_2417 a8e032b3a2beb7560aac908ae8d2a331 1091 SUPERFAMILY SSF82866 311 511 1.31E-37 T 12-10-2018 Acife_0456 eee3e5f271eb61779e228991c0448285 875 SUPERFAMILY SSF55073 323 474 4.71E-45 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_0456 eee3e5f271eb61779e228991c0448285 875 SMART SM00052 494 738 1.1E-63 T 12-10-2018 IPR001633 EAL domain Acife_0456 eee3e5f271eb61779e228991c0448285 875 Gene3D G3DSA:3.20.20.450 496 746 1.0E-68 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0456 eee3e5f271eb61779e228991c0448285 875 Pfam PF00990 Diguanylate cyclase, GGDEF domain 318 472 1.1E-43 T 12-10-2018 IPR000160 GGDEF domain Acife_0456 eee3e5f271eb61779e228991c0448285 875 SMART SM00267 307 480 1.1E-59 T 12-10-2018 IPR000160 GGDEF domain Acife_0456 eee3e5f271eb61779e228991c0448285 875 Gene3D G3DSA:3.30.70.270 312 479 2.1E-53 T 12-10-2018 Acife_0456 eee3e5f271eb61779e228991c0448285 875 Pfam PF00563 EAL domain 500 733 3.0E-57 T 12-10-2018 IPR001633 EAL domain Acife_0456 eee3e5f271eb61779e228991c0448285 875 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 315 472 8.3E-42 T 12-10-2018 IPR000160 GGDEF domain Acife_0456 eee3e5f271eb61779e228991c0448285 875 SUPERFAMILY SSF141868 500 745 2.22E-61 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0456 eee3e5f271eb61779e228991c0448285 875 Gene3D G3DSA:3.30.450.20 20 163 1.2E-7 T 12-10-2018 Acife_2063 c1506540812952bdc2704a80146e2cd0 518 Pfam PF07690 Major Facilitator Superfamily 31 409 2.4E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_2063 c1506540812952bdc2704a80146e2cd0 518 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 26 492 7.8E-79 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Acife_2063 c1506540812952bdc2704a80146e2cd0 518 SUPERFAMILY SSF103473 24 498 1.31E-42 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 Gene3D G3DSA:3.30.70.1320 135 326 7.5E-294 T 12-10-2018 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 Gene3D G3DSA:3.30.70.1440 649 845 7.5E-294 T 12-10-2018 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 SUPERFAMILY SSF82693 551 651 1.67E-14 T 12-10-2018 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 Gene3D G3DSA:1.20.1640.10 10 498 7.5E-294 T 12-10-2018 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 Gene3D G3DSA:3.30.2090.10 179 269 7.5E-294 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 SUPERFAMILY SSF82866 785 1009 1.05E-48 T 12-10-2018 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 Pfam PF00873 AcrB/AcrD/AcrF family 3 1005 5.3E-292 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 SUPERFAMILY SSF82866 291 490 3.53E-44 T 12-10-2018 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 Gene3D G3DSA:1.20.1640.10 499 1002 7.5E-294 T 12-10-2018 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 Gene3D G3DSA:3.30.70.1430 553 648 7.5E-294 T 12-10-2018 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 SUPERFAMILY SSF82693 40 127 8.02E-21 T 12-10-2018 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 538 555 1.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 1.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 SUPERFAMILY SSF82714 702 787 1.31E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 Gene3D G3DSA:3.30.2090.10 701 788 7.5E-294 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 SUPERFAMILY SSF82693 137 323 5.93E-19 T 12-10-2018 Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 SUPERFAMILY SSF82714 183 266 8.63E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0198 35d4afb997e1fed8736f82873d40afbd 1027 Gene3D G3DSA:3.30.70.1430 40 796 7.5E-294 T 12-10-2018 Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 SMART SM00861 356 527 1.0E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 SUPERFAMILY SSF52518 353 527 1.87E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 333 2.6E-163 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 SUPERFAMILY SSF52518 6 329 2.84E-119 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 Gene3D G3DSA:3.40.50.970 4 327 2.1E-134 T 12-10-2018 Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 Pfam PF02779 Transketolase, pyrimidine binding domain 355 526 4.6E-44 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 664 8.2E-299 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 Gene3D G3DSA:3.40.50.920 540 663 5.8E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 Gene3D G3DSA:3.40.50.970 329 539 1.4E-77 T 12-10-2018 Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 Pfam PF02780 Transketolase, C-terminal domain 556 658 2.6E-10 T 12-10-2018 IPR033248 Transketolase, C-terminal domain Acife_0188 b9d79e6bfcb79024bfd91b636db52dac 665 SUPERFAMILY SSF52922 537 664 1.86E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Acife_0140 067fa5b106674fb5a53c5b7c59d4cac5 140 Pfam PF03061 Thioesterase superfamily 22 87 1.1E-13 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Acife_0140 067fa5b106674fb5a53c5b7c59d4cac5 140 Gene3D G3DSA:3.10.129.10 4 137 6.7E-37 T 12-10-2018 Acife_0140 067fa5b106674fb5a53c5b7c59d4cac5 140 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 13 30 - T 12-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 Acife_0140 067fa5b106674fb5a53c5b7c59d4cac5 140 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 124 5.8E-30 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Acife_0140 067fa5b106674fb5a53c5b7c59d4cac5 140 PIRSF PIRSF003230 1 139 7.1E-41 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Acife_0140 067fa5b106674fb5a53c5b7c59d4cac5 140 SUPERFAMILY SSF54637 6 134 2.07E-37 T 12-10-2018 IPR029069 HotDog domain superfamily Acife_0140 067fa5b106674fb5a53c5b7c59d4cac5 140 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 10 132 1.8E-47 T 12-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 Pfam PF00575 S1 RNA binding domain 136 197 1.3E-7 T 12-10-2018 IPR003029 S1 domain GO:0003676 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 415 3.5E-18 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 442 491 1.9E-14 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 Pfam PF13184 NusA-like KH domain 232 299 5.3E-27 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 Gene3D G3DSA:1.10.150.20 355 423 6.5E-26 T 12-10-2018 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 Gene3D G3DSA:3.30.300.20 280 349 2.9E-25 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 Gene3D G3DSA:2.40.50.140 138 200 2.0E-21 T 12-10-2018 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 344 1.4E-122 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 Gene3D G3DSA:3.30.1480.10 1 132 1.6E-39 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 Pfam PF08529 NusA N-terminal domain 4 127 1.5E-34 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 Gene3D G3DSA:3.30.300.20 201 279 5.2E-30 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 SUPERFAMILY SSF54814 202 279 1.83E-29 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 SUPERFAMILY SSF47794 431 492 3.77E-13 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 SUPERFAMILY SSF47794 351 416 6.44E-16 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 Pfam PF14520 Helix-hairpin-helix domain 434 488 2.4E-7 T 12-10-2018 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 426 29.302 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 SUPERFAMILY SSF50249 136 201 2.08E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 Gene3D G3DSA:1.10.150.20 433 491 6.4E-18 T 12-10-2018 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 SUPERFAMILY SSF54814 281 344 1.05E-15 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 SUPERFAMILY SSF69705 1 129 2.62E-37 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Acife_2651 f13c4b1e5cdb190e09fd0c10fb3e86ff 493 SMART SM00316 136 202 8.4E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_0943 4c8dc2a17a47c3582db7fa04e1a78f26 94 Gene3D G3DSA:1.10.10.1920 16 90 1.7E-23 T 12-10-2018 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 290 312 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 623 3.6E-244 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Gene3D G3DSA:2.70.20.10 188 470 1.1E-170 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Pfam PF01131 DNA topoisomerase 132 560 4.5E-129 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Gene3D G3DSA:1.10.290.10 261 396 1.1E-170 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 SMART SM00437 253 523 8.7E-116 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 SMART SM00436 108 196 7.8E-51 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 SUPERFAMILY SSF57783 628 671 7.82E-12 T 12-10-2018 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Gene3D G3DSA:3.30.65.10 626 677 2.6E-8 T 12-10-2018 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Gene3D G3DSA:3.30.65.10 575 625 6.8E-9 T 12-10-2018 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 SMART SM00493 3 103 2.6E-24 T 12-10-2018 IPR006171 TOPRIM domain Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 702 53.438 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Pfam PF01751 Toprim domain 4 117 2.8E-24 T 12-10-2018 IPR006171 TOPRIM domain Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Gene3D G3DSA:1.10.460.10 139 563 1.1E-170 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 SUPERFAMILY SSF56712 4 601 2.22E-189 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 589 623 5.9E-14 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 634 670 1.5E-14 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 677 714 7.8E-14 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 8.2E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 8.2E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 486 500 8.2E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 8.2E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 8.2E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_0011 c2829fda54da2ab44bff982e6c8f8aae 861 Gene3D G3DSA:3.40.50.140 1 138 1.1E-49 T 12-10-2018 Acife_3176 a95e9c9189035ce4113b5d503b326510 130 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 9 126 8.1E-34 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Acife_3176 a95e9c9189035ce4113b5d503b326510 130 Pfam PF01042 Endoribonuclease L-PSP 11 125 1.1E-30 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Acife_3176 a95e9c9189035ce4113b5d503b326510 130 Gene3D G3DSA:3.30.1330.40 4 129 2.9E-37 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Acife_3176 a95e9c9189035ce4113b5d503b326510 130 SUPERFAMILY SSF55298 7 127 3.61E-33 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Acife_1022 86297f95c694768821aac7d476b8286d 276 Pfam PF02673 Bacitracin resistance protein BacA 8 269 5.7E-71 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Acife_1022 86297f95c694768821aac7d476b8286d 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 275 15.127 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Acife_0152 b23ed9785f99a2307499a81d0935dfd1 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.357 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0152 b23ed9785f99a2307499a81d0935dfd1 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 2.0E-11 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0152 b23ed9785f99a2307499a81d0935dfd1 44 Pfam PF00468 Ribosomal protein L34 1 43 2.9E-23 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0152 b23ed9785f99a2307499a81d0935dfd1 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 42 2.8E-24 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0152 b23ed9785f99a2307499a81d0935dfd1 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_0634 2aba08304a9a609c54d48ab915e26f24 319 Pfam PF01479 S4 domain 19 65 7.4E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_0634 2aba08304a9a609c54d48ab915e26f24 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_0634 2aba08304a9a609c54d48ab915e26f24 319 SUPERFAMILY SSF55120 77 313 6.37E-77 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_0634 2aba08304a9a609c54d48ab915e26f24 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 312 1.5E-94 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_0634 2aba08304a9a609c54d48ab915e26f24 319 Gene3D G3DSA:3.30.2350.10 85 316 6.6E-71 T 12-10-2018 Acife_0634 2aba08304a9a609c54d48ab915e26f24 319 Pfam PF00849 RNA pseudouridylate synthase 93 241 5.7E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_0634 2aba08304a9a609c54d48ab915e26f24 319 SUPERFAMILY SSF55174 18 103 1.62E-13 T 12-10-2018 Acife_0634 2aba08304a9a609c54d48ab915e26f24 319 SMART SM00363 19 83 1.3E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_0634 2aba08304a9a609c54d48ab915e26f24 319 Gene3D G3DSA:3.10.290.10 8 73 3.9E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Acife_1316 20f030d7720ad8951dcbcfd12af87fb3 443 Gene3D G3DSA:3.20.20.140 54 359 4.0E-130 T 12-10-2018 Acife_1316 20f030d7720ad8951dcbcfd12af87fb3 443 SUPERFAMILY SSF51338 1 426 9.73E-32 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Acife_1316 20f030d7720ad8951dcbcfd12af87fb3 443 SUPERFAMILY SSF51556 54 363 8.69E-93 T 12-10-2018 IPR032466 Metal-dependent hydrolase Acife_1316 20f030d7720ad8951dcbcfd12af87fb3 443 Gene3D G3DSA:2.30.40.10 4 424 4.0E-130 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Acife_1316 20f030d7720ad8951dcbcfd12af87fb3 443 ProSitePatterns PS00483 Dihydroorotase signature 2. 298 309 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1316 20f030d7720ad8951dcbcfd12af87fb3 443 Pfam PF01979 Amidohydrolase family 50 416 4.5E-28 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Acife_1316 20f030d7720ad8951dcbcfd12af87fb3 443 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 19 418 1.5E-103 T 12-10-2018 Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 SMART SM00388 226 287 4.3E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 Gene3D G3DSA:3.30.450.300 32 149 1.2E-6 T 12-10-2018 IPR038421 Sensor histidine kinase RisS, periplasmic domain superfamily Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 2.6E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 2.6E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 2.6E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 424 9.3E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 SUPERFAMILY SSF47384 217 283 2.55E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 SMART SM00387 324 431 5.0E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 283 1.2E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 SUPERFAMILY SSF55874 290 429 2.75E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 Gene3D G3DSA:3.30.565.10 288 431 4.5E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1060 6ff47dd973faaf768a5ea96832f25787 431 Gene3D G3DSA:1.10.287.130 215 283 6.5E-15 T 12-10-2018 Acife_2436 5a5d2e1751552c0cc1e564767a8b2a3f 641 Gene3D G3DSA:3.40.50.300 449 638 1.6E-35 T 12-10-2018 Acife_2436 5a5d2e1751552c0cc1e564767a8b2a3f 641 SMART SM00487 26 300 0.0055 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_2436 5a5d2e1751552c0cc1e564767a8b2a3f 641 SUPERFAMILY SSF52540 29 606 3.34E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2436 5a5d2e1751552c0cc1e564767a8b2a3f 641 Pfam PF13307 Helicase C-terminal domain 466 623 3.3E-35 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Acife_2436 5a5d2e1751552c0cc1e564767a8b2a3f 641 SMART SM00491 481 610 4.4E-40 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Acife_2436 5a5d2e1751552c0cc1e564767a8b2a3f 641 Gene3D G3DSA:3.40.50.300 28 273 8.6E-42 T 12-10-2018 Acife_2069 24ba158722ec38cffc9f1fc92590f6ef 152 Pfam PF01814 Hemerythrin HHE cation binding domain 4 128 3.0E-15 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Acife_2069 24ba158722ec38cffc9f1fc92590f6ef 152 Gene3D G3DSA:1.20.120.520 3 142 1.1E-13 T 12-10-2018 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 Pfam PF03483 B3/4 domain 225 388 9.8E-51 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 SMART SM00873 225 396 2.3E-58 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 Pfam PF03484 tRNA synthetase B5 domain 417 482 6.8E-16 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 Pfam PF03147 Ferredoxin-fold anticodon binding domain 705 792 3.7E-20 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 Gene3D G3DSA:2.40.50.140 39 154 8.2E-63 T 12-10-2018 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 Gene3D G3DSA:3.30.56.10 7 179 8.2E-63 T 12-10-2018 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 SUPERFAMILY SSF46955 414 486 4.39E-16 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 792 38.855 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 Gene3D G3DSA:3.30.56.10 412 486 1.7E-22 T 12-10-2018 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 Pfam PF01588 Putative tRNA binding domain 45 145 9.0E-20 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 Gene3D G3DSA:3.50.40.10 211 401 3.8E-57 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 SUPERFAMILY SSF50249 35 190 4.57E-42 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 SUPERFAMILY SSF56037 213 389 1.07E-53 T 12-10-2018 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 SMART SM00874 414 482 3.3E-26 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 SUPERFAMILY SSF54991 700 798 3.66E-22 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 792 1.5E-216 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 Gene3D G3DSA:3.30.930.10 505 693 1.9E-52 T 12-10-2018 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 SUPERFAMILY SSF55681 478 692 8.95E-46 T 12-10-2018 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 SMART SM00896 705 798 1.4E-27 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Acife_2534 8d773d9d7c7c505ba57a00b212a3e98f 799 Gene3D G3DSA:3.30.70.380 706 798 1.4E-19 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Acife_2754 e87b7ca090b3099fb30eef2a7bf2e105 565 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 66 227 4.7E-17 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Acife_0594 53b3b76c2220a3643e7d5a50d82ddc19 276 SUPERFAMILY SSF55347 130 239 7.85E-31 T 12-10-2018 Acife_0594 53b3b76c2220a3643e7d5a50d82ddc19 276 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 268 30.642 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0594 53b3b76c2220a3643e7d5a50d82ddc19 276 PIRSF PIRSF000161 3 271 1.4E-77 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0594 53b3b76c2220a3643e7d5a50d82ddc19 276 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 131 267 1.5E-38 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0594 53b3b76c2220a3643e7d5a50d82ddc19 276 SUPERFAMILY SSF51735 4 271 1.93E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0594 53b3b76c2220a3643e7d5a50d82ddc19 276 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 268 1.7E-81 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0594 53b3b76c2220a3643e7d5a50d82ddc19 276 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 128 2.4E-32 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0594 53b3b76c2220a3643e7d5a50d82ddc19 276 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 153 170 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0594 53b3b76c2220a3643e7d5a50d82ddc19 276 Gene3D G3DSA:3.40.50.720 6 267 1.2E-91 T 12-10-2018 Acife_0594 53b3b76c2220a3643e7d5a50d82ddc19 276 Gene3D G3DSA:3.30.360.10 130 237 1.2E-91 T 12-10-2018 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 Gene3D G3DSA:1.20.58.1480 127 250 2.5E-45 T 12-10-2018 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 SUPERFAMILY SSF54211 602 777 9.86E-58 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 Hamap MF_01973 Lon protease [lon]. 17 779 71.24 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 17 207 6.8E-43 T 12-10-2018 IPR003111 Lon, substrate-binding domain Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 SUPERFAMILY SSF88697 17 207 1.74E-50 T 12-10-2018 IPR015947 PUA-like superfamily Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 SUPERFAMILY SSF52540 320 595 1.33E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 SMART SM00382 355 499 9.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 577 779 8.0E-97 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 680 699 6.8E-55 T 12-10-2018 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 733 751 6.8E-55 T 12-10-2018 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 602 618 6.8E-55 T 12-10-2018 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 710 729 6.8E-55 T 12-10-2018 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 363 382 6.8E-55 T 12-10-2018 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 Gene3D G3DSA:2.30.130.40 10 123 1.0E-34 T 12-10-2018 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 Gene3D G3DSA:3.30.230.10 592 779 8.1E-81 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 PIRSF PIRSF001174 5 782 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 Gene3D G3DSA:3.40.50.300 320 497 2.3E-60 T 12-10-2018 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 TIGRFAM TIGR00763 lon: endopeptidase La 18 777 4.2E-301 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 Gene3D G3DSA:1.10.8.60 498 591 2.0E-32 T 12-10-2018 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 359 495 1.9E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_1403 2a8b87fa9d9ed6798290a11ca11c0dcc 810 SMART SM00464 16 208 2.1E-77 T 12-10-2018 IPR003111 Lon, substrate-binding domain Acife_3081 d9254ea03e45146fa4b3b2a4ba1092bf 326 Gene3D G3DSA:3.40.50.970 1 191 4.9E-74 T 12-10-2018 Acife_3081 d9254ea03e45146fa4b3b2a4ba1092bf 326 SMART SM00861 4 179 4.0E-57 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Acife_3081 d9254ea03e45146fa4b3b2a4ba1092bf 326 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 3.4E-46 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Acife_3081 d9254ea03e45146fa4b3b2a4ba1092bf 326 SUPERFAMILY SSF52518 3 203 1.12E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_3081 d9254ea03e45146fa4b3b2a4ba1092bf 326 Gene3D G3DSA:3.40.50.920 192 325 8.2E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Acife_3081 d9254ea03e45146fa4b3b2a4ba1092bf 326 Pfam PF02780 Transketolase, C-terminal domain 195 315 5.8E-34 T 12-10-2018 IPR033248 Transketolase, C-terminal domain Acife_3081 d9254ea03e45146fa4b3b2a4ba1092bf 326 SUPERFAMILY SSF52922 188 324 5.89E-38 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Acife_1786 806ac1f5a6d4a6fb40fe1e53a704f862 447 Gene3D G3DSA:3.40.640.10 78 345 1.7E-134 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1786 806ac1f5a6d4a6fb40fe1e53a704f862 447 Pfam PF02347 Glycine cleavage system P-protein 3 386 2.0E-102 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Acife_1786 806ac1f5a6d4a6fb40fe1e53a704f862 447 SUPERFAMILY SSF53383 1 444 1.49E-94 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_1786 806ac1f5a6d4a6fb40fe1e53a704f862 447 Gene3D G3DSA:3.90.1150.10 67 439 1.7E-134 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_2175 220f2bd61f044bde9b7746725c924c74 506 SUPERFAMILY SSF53686 11 351 7.73E-107 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Acife_2175 220f2bd61f044bde9b7746725c924c74 506 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 501 4.5E-242 T 12-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Acife_2175 220f2bd61f044bde9b7746725c924c74 506 Gene3D G3DSA:3.40.50.1100 49 145 1.5E-140 T 12-10-2018 Acife_2175 220f2bd61f044bde9b7746725c924c74 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 318 407 3.8E-25 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Acife_2175 220f2bd61f044bde9b7746725c924c74 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 415 501 2.3E-23 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Acife_2175 220f2bd61f044bde9b7746725c924c74 506 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 41 54 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Acife_2175 220f2bd61f044bde9b7746725c924c74 506 Gene3D G3DSA:3.40.50.1100 13 316 1.5E-140 T 12-10-2018 Acife_2175 220f2bd61f044bde9b7746725c924c74 506 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 305 1.5E-87 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Acife_2175 220f2bd61f044bde9b7746725c924c74 506 SUPERFAMILY SSF55021 326 411 7.1E-26 T 12-10-2018 Acife_2175 220f2bd61f044bde9b7746725c924c74 506 Gene3D G3DSA:3.40.1020.10 327 503 5.2E-70 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Acife_2175 220f2bd61f044bde9b7746725c924c74 506 SUPERFAMILY SSF55021 408 501 2.22E-25 T 12-10-2018 Acife_1781 9b204a7fbd0e039c3eacb95f906d25aa 562 SUPERFAMILY SSF90123 16 325 4.05E-70 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Acife_1781 9b204a7fbd0e039c3eacb95f906d25aa 562 Gene3D G3DSA:3.40.50.300 340 560 4.9E-67 T 12-10-2018 Acife_1781 9b204a7fbd0e039c3eacb95f906d25aa 562 SMART SM00382 366 551 3.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1781 9b204a7fbd0e039c3eacb95f906d25aa 562 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_1781 9b204a7fbd0e039c3eacb95f906d25aa 562 SUPERFAMILY SSF52540 353 554 7.23E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1781 9b204a7fbd0e039c3eacb95f906d25aa 562 Pfam PF00664 ABC transporter transmembrane region 29 297 1.4E-37 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Acife_1781 9b204a7fbd0e039c3eacb95f906d25aa 562 Gene3D G3DSA:1.20.1560.10 6 331 5.3E-76 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Acife_1781 9b204a7fbd0e039c3eacb95f906d25aa 562 Pfam PF00005 ABC transporter 358 505 1.9E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_0686 c4bb51e8ecf544f3699beaac436eaec0 295 Gene3D G3DSA:2.60.200.30 129 265 1.4E-87 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Acife_0686 c4bb51e8ecf544f3699beaac436eaec0 295 SUPERFAMILY SSF111331 7 289 1.44E-82 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Acife_0686 c4bb51e8ecf544f3699beaac436eaec0 295 Pfam PF01513 ATP-NAD kinase 60 272 4.5E-61 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Acife_0686 c4bb51e8ecf544f3699beaac436eaec0 295 Gene3D G3DSA:3.40.50.10330 25 288 1.4E-87 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Acife_0686 c4bb51e8ecf544f3699beaac436eaec0 295 Hamap MF_00361 NAD kinase [nadK]. 6 288 32.077 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Acife_2722 419ed9331c2105624756463c9bf2ee92 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 23.9 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Acife_2722 419ed9331c2105624756463c9bf2ee92 177 Gene3D G3DSA:3.30.70.940 1 117 3.2E-43 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Acife_2722 419ed9331c2105624756463c9bf2ee92 177 SUPERFAMILY SSF82679 3 113 3.4E-36 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Acife_2722 419ed9331c2105624756463c9bf2ee92 177 Pfam PF00467 KOW motif 127 158 2.3E-6 T 12-10-2018 IPR005824 KOW Acife_2722 419ed9331c2105624756463c9bf2ee92 177 SUPERFAMILY SSF50104 121 176 2.15E-19 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Acife_2722 419ed9331c2105624756463c9bf2ee92 177 Gene3D G3DSA:2.30.30.30 118 176 3.9E-25 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Acife_2722 419ed9331c2105624756463c9bf2ee92 177 SMART SM00738 2 111 1.4E-43 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Acife_2722 419ed9331c2105624756463c9bf2ee92 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 7.5E-19 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Acife_2722 419ed9331c2105624756463c9bf2ee92 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 7.5E-19 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Acife_2722 419ed9331c2105624756463c9bf2ee92 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 7.5E-19 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Acife_2722 419ed9331c2105624756463c9bf2ee92 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 4.9E-67 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Acife_2722 419ed9331c2105624756463c9bf2ee92 177 Pfam PF02357 Transcription termination factor nusG 3 108 1.9E-24 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Acife_2722 419ed9331c2105624756463c9bf2ee92 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Acife_2722 419ed9331c2105624756463c9bf2ee92 177 SMART SM00739 123 150 0.0016 T 12-10-2018 IPR005824 KOW Acife_0243 50bb39b04e924a667777502f1a32c435 434 SUPERFAMILY SSF111352 5 402 1.57E-99 T 12-10-2018 Acife_0243 50bb39b04e924a667777502f1a32c435 434 Pfam PF00909 Ammonium Transporter Family 12 420 8.7E-86 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Acife_0243 50bb39b04e924a667777502f1a32c435 434 ProSitePatterns PS01219 Ammonium transporters signature. 169 194 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Acife_0243 50bb39b04e924a667777502f1a32c435 434 TIGRFAM TIGR00836 amt: ammonium transporter 10 420 1.3E-114 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Acife_0243 50bb39b04e924a667777502f1a32c435 434 Gene3D G3DSA:1.10.3430.10 1 432 2.9E-126 T 12-10-2018 IPR029020 Ammonium/urea transporter Acife_0243 50bb39b04e924a667777502f1a32c435 434 PRINTS PR00342 Rhesus blood group protein signature 208 226 9.3E-10 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Acife_0243 50bb39b04e924a667777502f1a32c435 434 PRINTS PR00342 Rhesus blood group protein signature 331 347 9.3E-10 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Acife_0243 50bb39b04e924a667777502f1a32c435 434 PRINTS PR00342 Rhesus blood group protein signature 239 261 9.3E-10 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Acife_0243 50bb39b04e924a667777502f1a32c435 434 PRINTS PR00342 Rhesus blood group protein signature 294 312 9.3E-10 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Acife_0243 50bb39b04e924a667777502f1a32c435 434 PRINTS PR00342 Rhesus blood group protein signature 113 129 9.3E-10 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Acife_2720 dc8484546e2bbb6104c16826d2f505a5 230 Gene3D G3DSA:3.30.190.20 21 225 2.3E-77 T 12-10-2018 Acife_2720 dc8484546e2bbb6104c16826d2f505a5 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 226 4.3E-101 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Acife_2720 dc8484546e2bbb6104c16826d2f505a5 230 SUPERFAMILY SSF56808 6 226 1.23E-78 T 12-10-2018 IPR023674 Ribosomal protein L1-like Acife_2720 dc8484546e2bbb6104c16826d2f505a5 230 Gene3D G3DSA:3.40.50.790 68 159 2.3E-77 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Acife_2720 dc8484546e2bbb6104c16826d2f505a5 230 Pfam PF00687 Ribosomal protein L1p/L10e family 30 220 2.4E-49 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Acife_2720 dc8484546e2bbb6104c16826d2f505a5 230 PIRSF PIRSF002155 1 227 5.7E-78 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2720 dc8484546e2bbb6104c16826d2f505a5 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2720 dc8484546e2bbb6104c16826d2f505a5 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 229 42.469 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Acife_1477 43b70b493b44fa6a3f59f7a44b0429a2 313 SUPERFAMILY SSF103481 44 144 1.16E-13 T 12-10-2018 Acife_1477 43b70b493b44fa6a3f59f7a44b0429a2 313 Pfam PF00892 EamA-like transporter family 13 141 2.3E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Acife_1477 43b70b493b44fa6a3f59f7a44b0429a2 313 Pfam PF00892 EamA-like transporter family 157 293 4.7E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Acife_1477 43b70b493b44fa6a3f59f7a44b0429a2 313 SUPERFAMILY SSF103481 193 295 3.66E-11 T 12-10-2018 Acife_0228 c9e8fdf42ff5b20813c8308c0b2b6fde 217 Pfam PF04264 YceI-like domain 45 211 5.5E-42 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Acife_0228 c9e8fdf42ff5b20813c8308c0b2b6fde 217 SMART SM00867 44 213 2.5E-60 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Acife_0228 c9e8fdf42ff5b20813c8308c0b2b6fde 217 Gene3D G3DSA:2.40.128.110 42 215 2.3E-50 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Acife_0228 c9e8fdf42ff5b20813c8308c0b2b6fde 217 SUPERFAMILY SSF101874 42 215 8.11E-53 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Acife_2753 cf9301f73ad36a5dc0e26c28c386a215 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 6 148 1.1E-56 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Acife_2753 cf9301f73ad36a5dc0e26c28c386a215 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 153 75.451 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Acife_2753 cf9301f73ad36a5dc0e26c28c386a215 154 Pfam PF01668 SmpB protein 6 148 7.5E-61 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Acife_2753 cf9301f73ad36a5dc0e26c28c386a215 154 Gene3D G3DSA:2.40.280.10 1 126 1.4E-48 T 12-10-2018 IPR023620 Small protein B Acife_2753 cf9301f73ad36a5dc0e26c28c386a215 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 6 130 1.0E-50 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Acife_2753 cf9301f73ad36a5dc0e26c28c386a215 154 ProSitePatterns PS01317 SsrA-binding protein. 24 36 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site Acife_2753 cf9301f73ad36a5dc0e26c28c386a215 154 SUPERFAMILY SSF74982 3 130 1.83E-51 T 12-10-2018 IPR023620 Small protein B Acife_0951 393fbc912d3cb3b1207aae500bf567de 69 Gene3D G3DSA:3.30.160.250 1 64 6.7E-11 T 12-10-2018 Acife_0951 393fbc912d3cb3b1207aae500bf567de 69 SUPERFAMILY SSF143100 4 60 4.71E-14 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like Acife_2205 621f454ca411eeea3fcfd952dd9bd181 202 Pfam PF12804 MobA-like NTP transferase domain 25 173 1.8E-33 T 12-10-2018 IPR025877 MobA-like NTP transferase Acife_2205 621f454ca411eeea3fcfd952dd9bd181 202 SUPERFAMILY SSF53448 22 200 7.21E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2205 621f454ca411eeea3fcfd952dd9bd181 202 Gene3D G3DSA:3.90.550.10 20 202 3.1E-50 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2205 621f454ca411eeea3fcfd952dd9bd181 202 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 24 201 4.6E-55 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Acife_2205 621f454ca411eeea3fcfd952dd9bd181 202 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 21 194 21.508 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Pfam PF07721 Tetratricopeptide repeat 62 81 0.38 T 12-10-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Pfam PF00515 Tetratricopeptide repeat 501 533 2.2E-7 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SUPERFAMILY SSF48452 197 361 1.36E-34 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 432 465 2.3E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 193 226 28.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 295 328 1.2E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 466 499 1.5E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 57 90 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 91 124 0.08 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 125 158 40.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 227 260 0.024 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 397 431 0.062 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 363 396 0.023 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 329 362 0.027 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 500 533 2.5E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SMART SM00028 261 294 7.1 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SUPERFAMILY SSF48452 63 264 1.44E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Gene3D G3DSA:1.25.40.10 60 191 2.0E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Gene3D G3DSA:1.25.40.10 333 400 1.8E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Gene3D G3DSA:1.25.40.10 269 332 2.5E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Gene3D G3DSA:1.25.40.10 474 544 3.2E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Pfam PF13424 Tetratricopeptide repeat 432 497 3.7E-15 T 12-10-2018 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Pfam PF13424 Tetratricopeptide repeat 199 257 3.4E-7 T 12-10-2018 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Pfam PF13424 Tetratricopeptide repeat 365 428 1.6E-7 T 12-10-2018 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Pfam PF13424 Tetratricopeptide repeat 297 359 5.7E-8 T 12-10-2018 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Pfam PF14559 Tetratricopeptide repeat 105 157 7.1E-7 T 12-10-2018 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 SUPERFAMILY SSF48452 324 535 2.87E-45 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Gene3D G3DSA:1.25.40.10 192 268 3.7E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0495 d6e3c540fbe4e9cf482d6deb4a1f085b 545 Gene3D G3DSA:1.25.40.10 401 473 3.9E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_3157 dfb6d2dbed6c08317520ce1f7d6bf6ae 787 ProSitePatterns PS00820 Glucoamylase active site region signature. 422 432 - T 12-10-2018 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 Acife_3157 dfb6d2dbed6c08317520ce1f7d6bf6ae 787 Pfam PF00723 Glycosyl hydrolases family 15 281 350 1.6E-8 T 12-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Acife_3157 dfb6d2dbed6c08317520ce1f7d6bf6ae 787 Pfam PF00723 Glycosyl hydrolases family 15 369 586 2.6E-13 T 12-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Acife_3157 dfb6d2dbed6c08317520ce1f7d6bf6ae 787 SUPERFAMILY SSF74650 7 266 9.89E-54 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Acife_3157 dfb6d2dbed6c08317520ce1f7d6bf6ae 787 Pfam PF09137 Glucodextranase, domain N 8 264 3.4E-72 T 12-10-2018 IPR015220 Glucodextranase, N-terminal KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 Acife_3157 dfb6d2dbed6c08317520ce1f7d6bf6ae 787 SUPERFAMILY SSF48208 277 687 3.33E-74 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Acife_3157 dfb6d2dbed6c08317520ce1f7d6bf6ae 787 Gene3D G3DSA:1.50.10.10 274 690 7.9E-154 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Acife_3157 dfb6d2dbed6c08317520ce1f7d6bf6ae 787 Gene3D G3DSA:2.70.98.10 1 265 9.4E-69 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Acife_0577 20ed5fb7d293fad7824bc234b29cffbf 216 PIRSF PIRSF001435 4 211 2.8E-47 T 12-10-2018 Acife_0577 20ed5fb7d293fad7824bc234b29cffbf 216 SMART SM00478 38 185 1.3E-48 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Acife_0577 20ed5fb7d293fad7824bc234b29cffbf 216 Gene3D G3DSA:1.10.340.30 21 132 1.6E-71 T 12-10-2018 Acife_0577 20ed5fb7d293fad7824bc234b29cffbf 216 Gene3D G3DSA:1.10.1670.10 12 203 1.6E-71 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Acife_0577 20ed5fb7d293fad7824bc234b29cffbf 216 TIGRFAM TIGR01083 nth: endonuclease III 5 194 4.9E-75 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Acife_0577 20ed5fb7d293fad7824bc234b29cffbf 216 Hamap MF_00942 Endonuclease III [nth]. 1 209 35.559 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Acife_0577 20ed5fb7d293fad7824bc234b29cffbf 216 SUPERFAMILY SSF48150 5 212 1.88E-69 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Acife_0577 20ed5fb7d293fad7824bc234b29cffbf 216 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.3E-9 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Acife_0577 20ed5fb7d293fad7824bc234b29cffbf 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 164 1.4E-18 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Acife_0386 774a10b4480826b24b7121e2b4d10784 492 SUPERFAMILY SSF48150 311 490 1.33E-38 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Acife_0386 774a10b4480826b24b7121e2b4d10784 492 Pfam PF06029 AlkA N-terminal domain 201 321 4.0E-35 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Acife_0386 774a10b4480826b24b7121e2b4d10784 492 SUPERFAMILY SSF55945 201 302 1.16E-25 T 12-10-2018 Acife_0386 774a10b4480826b24b7121e2b4d10784 492 Pfam PF12833 Helix-turn-helix domain 111 187 2.2E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Acife_0386 774a10b4480826b24b7121e2b4d10784 492 SUPERFAMILY SSF46689 141 189 1.88E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_0386 774a10b4480826b24b7121e2b4d10784 492 Gene3D G3DSA:3.40.10.10 2 75 3.9E-27 T 12-10-2018 IPR035451 Ada-like domain superfamily Acife_0386 774a10b4480826b24b7121e2b4d10784 492 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 327 481 3.0E-6 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Acife_0386 774a10b4480826b24b7121e2b4d10784 492 Gene3D G3DSA:1.10.340.30 322 442 8.4E-31 T 12-10-2018 Acife_0386 774a10b4480826b24b7121e2b4d10784 492 SMART SM00478 331 492 3.6E-12 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Acife_0386 774a10b4480826b24b7121e2b4d10784 492 Gene3D G3DSA:3.30.310.20 201 321 3.1E-33 T 12-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily Acife_0386 774a10b4480826b24b7121e2b4d10784 492 Gene3D G3DSA:1.10.1670.10 444 492 9.6E-13 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Acife_0386 774a10b4480826b24b7121e2b4d10784 492 SMART SM00342 104 187 3.3E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Acife_0386 774a10b4480826b24b7121e2b4d10784 492 SMART SM01009 201 321 3.4E-48 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Acife_0386 774a10b4480826b24b7121e2b4d10784 492 Pfam PF02805 Metal binding domain of Ada 11 74 1.7E-27 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 Acife_0386 774a10b4480826b24b7121e2b4d10784 492 SUPERFAMILY SSF57884 5 76 2.88E-29 T 12-10-2018 IPR035451 Ada-like domain superfamily Acife_0386 774a10b4480826b24b7121e2b4d10784 492 Gene3D G3DSA:1.10.10.60 88 194 7.7E-19 T 12-10-2018 Acife_2680 57170e61ad186b0bffffff33461116d2 417 SUPERFAMILY SSF102645 191 404 1.57E-60 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Acife_2680 57170e61ad186b0bffffff33461116d2 417 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 11 400 1.7E-124 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Acife_2680 57170e61ad186b0bffffff33461116d2 417 SUPERFAMILY SSF52507 11 184 7.33E-59 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Acife_2680 57170e61ad186b0bffffff33461116d2 417 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 193 376 8.5E-57 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Acife_2680 57170e61ad186b0bffffff33461116d2 417 Gene3D G3DSA:3.40.50.10300 193 406 3.2E-58 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Acife_2680 57170e61ad186b0bffffff33461116d2 417 Gene3D G3DSA:3.40.50.1950 7 192 2.5E-58 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Acife_2680 57170e61ad186b0bffffff33461116d2 417 Pfam PF02441 Flavoprotein 14 185 2.8E-44 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Acife_0134 b85f48293016312b2626b84fbf581ccc 214 Pfam PF13394 4Fe-4S single cluster domain 27 107 4.3E-9 T 12-10-2018 Acife_0134 b85f48293016312b2626b84fbf581ccc 214 PIRSF PIRSF000370 3 213 1.4E-64 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Acife_0134 b85f48293016312b2626b84fbf581ccc 214 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 5 214 1.5E-106 T 12-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE Acife_0134 b85f48293016312b2626b84fbf581ccc 214 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 211 34.363 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Acife_0134 b85f48293016312b2626b84fbf581ccc 214 SUPERFAMILY SSF102114 22 104 3.66E-12 T 12-10-2018 Acife_0134 b85f48293016312b2626b84fbf581ccc 214 Pfam PF04055 Radical SAM superfamily 28 104 1.9E-11 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_0134 b85f48293016312b2626b84fbf581ccc 214 Gene3D G3DSA:3.20.20.70 5 208 3.5E-36 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 PRINTS PR00942 Copper-transporting ATPase 1 signature 219 244 2.9E-7 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 PRINTS PR00942 Copper-transporting ATPase 1 signature 8 33 2.9E-7 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 PRINTS PR00942 Copper-transporting ATPase 1 signature 34 57 2.9E-7 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 Gene3D G3DSA:2.70.150.20 297 409 1.3E-38 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 Pfam PF00702 haloacid dehalogenase-like hydrolase 500 714 5.0E-49 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 13 42 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 779 4.4E-91 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 SUPERFAMILY SSF81665 249 773 8.24E-16 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 10 70 3.1E-12 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 77 140 3.8E-9 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 Pfam PF00403 Heavy-metal-associated domain 13 70 1.5E-17 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 Pfam PF00403 Heavy-metal-associated domain 79 138 2.9E-13 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 Gene3D G3DSA:3.40.1110.10 515 632 1.3E-92 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 Gene3D G3DSA:3.30.70.100 75 153 2.6E-22 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 SUPERFAMILY SSF55008 76 146 1.28E-20 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 218 809 5.5E-175 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 236 808 1.1E-181 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 506 512 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 ProSitePatterns PS01229 Hypothetical cof family signature 2. 700 722 - T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 SUPERFAMILY SSF81653 312 404 1.31E-25 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 700 719 2.1E-26 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 354 368 2.1E-26 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 625 636 2.1E-26 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 723 735 2.1E-26 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 647 657 2.1E-26 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 504 518 2.1E-26 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 Pfam PF00122 E1-E2 ATPase 304 483 7.4E-51 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 Gene3D G3DSA:3.30.70.100 6 74 7.4E-23 T 12-10-2018 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 81 110 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 SUPERFAMILY SSF56784 502 806 1.83E-54 T 12-10-2018 IPR036412 HAD-like superfamily Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 SUPERFAMILY SSF55008 8 73 3.01E-21 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Acife_0232 9f6ee0eafd20d6e7aea82e2b02e5084f 833 Gene3D G3DSA:3.40.50.1000 485 752 1.3E-92 T 12-10-2018 IPR023214 HAD superfamily Acife_3214 d2c851705c2bd1b6d96503ecbc910352 739 Gene3D G3DSA:3.40.50.920 592 737 6.7E-6 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Acife_3214 d2c851705c2bd1b6d96503ecbc910352 739 Pfam PF09364 XFP N-terminal domain 102 256 1.7E-7 T 12-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Acife_3214 d2c851705c2bd1b6d96503ecbc910352 739 PIRSF PIRSF017245 2 735 6.0E-163 T 12-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Acife_3214 d2c851705c2bd1b6d96503ecbc910352 739 SUPERFAMILY SSF52518 55 333 5.89E-31 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_3214 d2c851705c2bd1b6d96503ecbc910352 739 SMART SM00861 390 578 2.6E-4 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Acife_3214 d2c851705c2bd1b6d96503ecbc910352 739 SUPERFAMILY SSF52518 385 578 5.24E-29 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_3214 d2c851705c2bd1b6d96503ecbc910352 739 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 409 559 7.6E-13 T 12-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Acife_3214 d2c851705c2bd1b6d96503ecbc910352 739 Gene3D G3DSA:3.40.50.970 393 591 7.0E-37 T 12-10-2018 Acife_3214 d2c851705c2bd1b6d96503ecbc910352 739 SUPERFAMILY SSF52922 584 734 2.28E-10 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Acife_3214 d2c851705c2bd1b6d96503ecbc910352 739 Gene3D G3DSA:3.40.50.970 40 390 4.3E-38 T 12-10-2018 Acife_1293 63acfd5dd5af700a33885017e236bfb6 503 SUPERFAMILY SSF109604 316 498 4.08E-36 T 12-10-2018 Acife_1293 63acfd5dd5af700a33885017e236bfb6 503 SUPERFAMILY SSF53067 14 134 6.04E-30 T 12-10-2018 Acife_1293 63acfd5dd5af700a33885017e236bfb6 503 Gene3D G3DSA:3.30.420.40 15 306 2.0E-74 T 12-10-2018 Acife_1293 63acfd5dd5af700a33885017e236bfb6 503 SUPERFAMILY SSF53067 140 312 1.68E-39 T 12-10-2018 Acife_1293 63acfd5dd5af700a33885017e236bfb6 503 Gene3D G3DSA:1.10.3210.10 313 502 6.4E-48 T 12-10-2018 Acife_1293 63acfd5dd5af700a33885017e236bfb6 503 Gene3D G3DSA:3.30.420.150 118 298 2.0E-74 T 12-10-2018 Acife_1293 63acfd5dd5af700a33885017e236bfb6 503 PIRSF PIRSF001267 4 501 1.9E-157 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 Acife_1293 63acfd5dd5af700a33885017e236bfb6 503 Pfam PF02541 Ppx/GppA phosphatase family 36 310 8.6E-69 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Acife_2428 2ee331abbe633e373eaed2f7f628351b 395 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 394 8.0E-104 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Acife_2428 2ee331abbe633e373eaed2f7f628351b 395 SUPERFAMILY SSF51905 7 389 2.59E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2428 2ee331abbe633e373eaed2f7f628351b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.9E-11 T 12-10-2018 Acife_2428 2ee331abbe633e373eaed2f7f628351b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 1.9E-11 T 12-10-2018 Acife_2428 2ee331abbe633e373eaed2f7f628351b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 141 156 1.9E-11 T 12-10-2018 Acife_2428 2ee331abbe633e373eaed2f7f628351b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 1.9E-11 T 12-10-2018 Acife_2428 2ee331abbe633e373eaed2f7f628351b 395 Gene3D G3DSA:3.30.9.50 79 273 2.8E-85 T 12-10-2018 Acife_2428 2ee331abbe633e373eaed2f7f628351b 395 Gene3D G3DSA:3.50.50.60 8 342 2.8E-85 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2428 2ee331abbe633e373eaed2f7f628351b 395 Pfam PF01494 FAD binding domain 8 344 4.1E-20 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 Acife_1404 8a67f2d6a674b60791e04b2cfd0dc38f 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Acife_1404 8a67f2d6a674b60791e04b2cfd0dc38f 90 SMART SM00411 1 90 2.5E-40 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1404 8a67f2d6a674b60791e04b2cfd0dc38f 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.4E-32 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1404 8a67f2d6a674b60791e04b2cfd0dc38f 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-16 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1404 8a67f2d6a674b60791e04b2cfd0dc38f 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-16 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1404 8a67f2d6a674b60791e04b2cfd0dc38f 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-16 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1404 8a67f2d6a674b60791e04b2cfd0dc38f 90 Gene3D G3DSA:4.10.520.10 1 90 5.3E-35 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_1404 8a67f2d6a674b60791e04b2cfd0dc38f 90 SUPERFAMILY SSF47729 1 90 4.71E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_2220 11ca03371a7b6ddab24548709f884a85 684 Gene3D G3DSA:3.40.50.300 212 441 5.5E-83 T 12-10-2018 Acife_2220 11ca03371a7b6ddab24548709f884a85 684 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 34 651 4.0E-213 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Acife_2220 11ca03371a7b6ddab24548709f884a85 684 Pfam PF17191 RecG wedge domain 17 174 6.8E-15 T 12-10-2018 IPR033454 RecG, wedge domain Acife_2220 11ca03371a7b6ddab24548709f884a85 684 SUPERFAMILY SSF52540 443 644 8.2E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2220 11ca03371a7b6ddab24548709f884a85 684 Pfam PF00270 DEAD/DEAH box helicase 268 424 7.2E-17 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Acife_2220 11ca03371a7b6ddab24548709f884a85 684 SUPERFAMILY SSF50249 9 177 1.7E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_2220 11ca03371a7b6ddab24548709f884a85 684 Gene3D G3DSA:3.40.50.300 448 620 1.7E-53 T 12-10-2018 Acife_2220 11ca03371a7b6ddab24548709f884a85 684 Gene3D G3DSA:2.40.50.140 50 143 2.8E-9 T 12-10-2018 Acife_2220 11ca03371a7b6ddab24548709f884a85 684 SUPERFAMILY SSF52540 210 444 1.14E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2220 11ca03371a7b6ddab24548709f884a85 684 Pfam PF00271 Helicase conserved C-terminal domain 469 578 9.6E-17 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_2220 11ca03371a7b6ddab24548709f884a85 684 SMART SM00490 487 579 2.6E-19 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_2220 11ca03371a7b6ddab24548709f884a85 684 SMART SM00487 260 450 2.4E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_2537 f65795b94c175985642dadc7524dedb2 65 SUPERFAMILY SSF143034 2 64 5.1E-24 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2537 f65795b94c175985642dadc7524dedb2 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.7E-20 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Acife_2537 f65795b94c175985642dadc7524dedb2 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.7E-20 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Acife_2537 f65795b94c175985642dadc7524dedb2 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.7E-20 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Acife_2537 f65795b94c175985642dadc7524dedb2 65 Gene3D G3DSA:2.40.50.530 1 64 2.9E-22 T 12-10-2018 Acife_2537 f65795b94c175985642dadc7524dedb2 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2537 f65795b94c175985642dadc7524dedb2 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 4.4E-25 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Acife_2537 f65795b94c175985642dadc7524dedb2 65 Pfam PF01632 Ribosomal protein L35 2 62 2.3E-24 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2537 f65795b94c175985642dadc7524dedb2 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.885 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Acife_2664 610dc7d4b621d5a0384916c37209d456 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 3 158 36.288 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Acife_2664 610dc7d4b621d5a0384916c37209d456 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4 157 1.4E-67 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Acife_2664 610dc7d4b621d5a0384916c37209d456 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Acife_2664 610dc7d4b621d5a0384916c37209d456 159 Gene3D G3DSA:3.30.1330.50 1 159 1.3E-67 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Acife_2664 610dc7d4b621d5a0384916c37209d456 159 Pfam PF02542 YgbB family 4 157 3.3E-64 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Acife_2664 610dc7d4b621d5a0384916c37209d456 159 SUPERFAMILY SSF69765 1 158 3.53E-65 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Acife_1649 4d6781e960ab4b32f28882d690084c0c 491 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 161 175 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Acife_1649 4d6781e960ab4b32f28882d690084c0c 491 SUPERFAMILY SSF53807 35 490 3.14E-160 T 12-10-2018 Acife_1649 4d6781e960ab4b32f28882d690084c0c 491 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 71 478 1.0E-107 T 12-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Acife_1649 4d6781e960ab4b32f28882d690084c0c 491 Gene3D G3DSA:3.40.50.1980 38 485 3.7E-215 T 12-10-2018 Acife_1649 4d6781e960ab4b32f28882d690084c0c 491 Gene3D G3DSA:3.40.50.1980 72 215 3.7E-215 T 12-10-2018 Acife_1649 4d6781e960ab4b32f28882d690084c0c 491 Gene3D G3DSA:3.40.50.1980 216 356 3.7E-215 T 12-10-2018 Acife_1649 4d6781e960ab4b32f28882d690084c0c 491 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 90 97 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Acife_1649 4d6781e960ab4b32f28882d690084c0c 491 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 23 490 3.6E-263 T 12-10-2018 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Acife_1649 4d6781e960ab4b32f28882d690084c0c 491 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 39 484 1.1E-186 T 12-10-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Acife_3238 b942d20a3cfb3b27d16ab484e12af58e 1113 Pfam PF13489 Methyltransferase domain 23 183 1.2E-19 T 12-10-2018 Acife_3238 b942d20a3cfb3b27d16ab484e12af58e 1113 SUPERFAMILY SSF53448 678 932 1.22E-48 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3238 b942d20a3cfb3b27d16ab484e12af58e 1113 Gene3D G3DSA:3.90.550.10 375 663 3.3E-66 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3238 b942d20a3cfb3b27d16ab484e12af58e 1113 Gene3D G3DSA:3.40.50.150 27 231 5.8E-42 T 12-10-2018 Acife_3238 b942d20a3cfb3b27d16ab484e12af58e 1113 SUPERFAMILY SSF53448 424 635 4.97E-48 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3238 b942d20a3cfb3b27d16ab484e12af58e 1113 SUPERFAMILY SSF53335 22 189 6.35E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_3238 b942d20a3cfb3b27d16ab484e12af58e 1113 Pfam PF00535 Glycosyl transferase family 2 427 549 2.0E-24 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_3238 b942d20a3cfb3b27d16ab484e12af58e 1113 Pfam PF00535 Glycosyl transferase family 2 685 815 6.5E-18 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_3238 b942d20a3cfb3b27d16ab484e12af58e 1113 Gene3D G3DSA:3.90.550.10 675 911 1.3E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2042 638ba0b7e2bf4447ff251fbcd18a99b4 498 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 38 471 3.9E-155 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Acife_2042 638ba0b7e2bf4447ff251fbcd18a99b4 498 Gene3D G3DSA:3.30.460.10 35 195 4.8E-59 T 12-10-2018 Acife_2042 638ba0b7e2bf4447ff251fbcd18a99b4 498 Pfam PF01743 Poly A polymerase head domain 68 198 1.4E-36 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Acife_2042 638ba0b7e2bf4447ff251fbcd18a99b4 498 Pfam PF12626 Polymerase A arginine-rich C-terminus 341 469 1.4E-40 T 12-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain Acife_2042 638ba0b7e2bf4447ff251fbcd18a99b4 498 SUPERFAMILY SSF81891 196 434 1.27E-45 T 12-10-2018 Acife_2042 638ba0b7e2bf4447ff251fbcd18a99b4 498 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 225 285 1.0E-15 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Acife_2042 638ba0b7e2bf4447ff251fbcd18a99b4 498 Gene3D G3DSA:1.10.3090.10 197 444 3.1E-84 T 12-10-2018 Acife_2042 638ba0b7e2bf4447ff251fbcd18a99b4 498 SUPERFAMILY SSF81301 40 194 1.74E-38 T 12-10-2018 Acife_2042 638ba0b7e2bf4447ff251fbcd18a99b4 498 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 24 474 37.215 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Acife_2813 054bba39df34bed4389d1c4d2407c4c2 594 Pfam PF00905 Penicillin binding protein transpeptidase domain 252 551 1.9E-75 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Acife_2813 054bba39df34bed4389d1c4d2407c4c2 594 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 209 8.4E-15 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Acife_2813 054bba39df34bed4389d1c4d2407c4c2 594 Gene3D G3DSA:3.30.450.330 228 556 1.1E-108 T 12-10-2018 Acife_2813 054bba39df34bed4389d1c4d2407c4c2 594 Gene3D G3DSA:3.40.710.10 288 472 1.1E-108 T 12-10-2018 Acife_2813 054bba39df34bed4389d1c4d2407c4c2 594 Gene3D G3DSA:3.90.1310.30 57 227 1.6E-39 T 12-10-2018 Acife_2813 054bba39df34bed4389d1c4d2407c4c2 594 SUPERFAMILY SSF56519 60 226 7.59E-39 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Acife_2813 054bba39df34bed4389d1c4d2407c4c2 594 SUPERFAMILY SSF56601 179 572 4.37E-93 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Acife_2814 4bff0e4e64d23654af22f86de1f1d74c 482 Pfam PF08245 Mur ligase middle domain 112 308 5.3E-46 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Acife_2814 4bff0e4e64d23654af22f86de1f1d74c 482 SUPERFAMILY SSF53244 329 480 1.24E-43 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_2814 4bff0e4e64d23654af22f86de1f1d74c 482 Gene3D G3DSA:3.90.190.20 339 482 2.3E-56 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_2814 4bff0e4e64d23654af22f86de1f1d74c 482 Gene3D G3DSA:3.40.1390.10 3 101 6.4E-13 T 12-10-2018 Acife_2814 4bff0e4e64d23654af22f86de1f1d74c 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 413 1.5E-17 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Acife_2814 4bff0e4e64d23654af22f86de1f1d74c 482 SUPERFAMILY SSF63418 7 93 5.89E-14 T 12-10-2018 IPR035911 MurE/MurF, N-terminal Acife_2814 4bff0e4e64d23654af22f86de1f1d74c 482 Gene3D G3DSA:3.40.1190.10 105 330 2.4E-64 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_2814 4bff0e4e64d23654af22f86de1f1d74c 482 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 480 29.882 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Acife_2814 4bff0e4e64d23654af22f86de1f1d74c 482 SUPERFAMILY SSF53623 108 319 1.04E-62 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_2814 4bff0e4e64d23654af22f86de1f1d74c 482 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 480 1.3E-130 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Acife_2511 9be482a8a7c87d22e3c236c005383814 212 SUPERFAMILY SSF103196 90 152 2.88E-9 T 12-10-2018 Acife_2511 9be482a8a7c87d22e3c236c005383814 212 Gene3D G3DSA:3.30.450.30 90 193 2.0E-5 T 12-10-2018 Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 Gene3D G3DSA:1.10.8.50 132 270 1.5E-43 T 12-10-2018 Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 SUPERFAMILY SSF81624 2 135 3.14E-41 T 12-10-2018 IPR035937 MutM-like, N-terminal Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 SUPERFAMILY SSF46946 131 222 8.68E-29 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 SMART SM01232 130 222 1.2E-45 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 8.5E-25 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 SUPERFAMILY SSF57716 218 269 4.04E-15 T 12-10-2018 Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 Gene3D G3DSA:3.20.190.10 2 129 1.1E-38 T 12-10-2018 IPR035937 MutM-like, N-terminal Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 42.986 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 1.4E-89 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 SMART SM00898 2 116 1.2E-48 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 1.1E-6 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Acife_0551 f21bf1ae3bfe4a24518db0c507c12b93 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 2.3E-31 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Acife_2499 90b44ec0b8147334c80eb9854890bdf1 364 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 9 363 26.763 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_2499 90b44ec0b8147334c80eb9854890bdf1 364 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 318 342 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_2499 90b44ec0b8147334c80eb9854890bdf1 364 Pfam PF01098 Cell cycle protein 20 360 1.2E-102 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_2499 90b44ec0b8147334c80eb9854890bdf1 364 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 15 359 5.4E-127 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_1704 4f572d39acf7c7ad25522e0e9a97a708 387 Gene3D G3DSA:1.20.1250.20 8 182 2.5E-23 T 12-10-2018 Acife_1704 4f572d39acf7c7ad25522e0e9a97a708 387 PIRSF PIRSF004925 2 386 2.4E-98 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter Acife_1704 4f572d39acf7c7ad25522e0e9a97a708 387 Gene3D G3DSA:1.20.1250.20 192 385 5.5E-40 T 12-10-2018 Acife_1704 4f572d39acf7c7ad25522e0e9a97a708 387 Pfam PF12832 MFS_1 like family 9 359 4.8E-64 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain Acife_1704 4f572d39acf7c7ad25522e0e9a97a708 387 SUPERFAMILY SSF103473 9 378 1.31E-44 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_2317 35471d7bdaa93a831f6cfee388303aa9 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 142 5.7E-15 T 12-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Acife_2317 35471d7bdaa93a831f6cfee388303aa9 404 Pfam PF01610 Transposase 157 390 7.7E-72 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Acife_2317 35471d7bdaa93a831f6cfee388303aa9 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 87 3.2E-13 T 12-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Acife_2682 0b6846bec485624f8e2fa6a5e61e1d02 124 Gene3D G3DSA:3.90.1030.10 1 117 4.3E-46 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2682 0b6846bec485624f8e2fa6a5e61e1d02 124 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.57 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2682 0b6846bec485624f8e2fa6a5e61e1d02 124 SUPERFAMILY SSF64263 1 118 5.1E-47 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2682 0b6846bec485624f8e2fa6a5e61e1d02 124 Pfam PF01196 Ribosomal protein L17 20 116 1.4E-32 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2682 0b6846bec485624f8e2fa6a5e61e1d02 124 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.9E-42 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2682 0b6846bec485624f8e2fa6a5e61e1d02 124 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0010 a015c9d2b5b1d3d47f161ae02ec1dfd1 108 PRINTS PR00354 7Fe ferredoxin signature 35 52 6.1E-16 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Acife_0010 a015c9d2b5b1d3d47f161ae02ec1dfd1 108 PRINTS PR00354 7Fe ferredoxin signature 9 19 6.1E-16 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Acife_0010 a015c9d2b5b1d3d47f161ae02ec1dfd1 108 PRINTS PR00354 7Fe ferredoxin signature 19 29 6.1E-16 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Acife_0010 a015c9d2b5b1d3d47f161ae02ec1dfd1 108 SUPERFAMILY SSF54862 3 85 1.74E-23 T 12-10-2018 Acife_0010 a015c9d2b5b1d3d47f161ae02ec1dfd1 108 Pfam PF00037 4Fe-4S binding domain 34 55 2.8E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_0010 a015c9d2b5b1d3d47f161ae02ec1dfd1 108 Pfam PF11953 Domain of unknown function (DUF3470) 67 106 1.1E-15 T 12-10-2018 IPR022569 Ferredoxin, C-terminal Acife_0010 a015c9d2b5b1d3d47f161ae02ec1dfd1 108 Gene3D G3DSA:3.30.70.20 2 96 7.6E-31 T 12-10-2018 Acife_0010 a015c9d2b5b1d3d47f161ae02ec1dfd1 108 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 487 504 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 Gene3D G3DSA:1.10.1390.10 497 539 2.8E-16 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 Gene3D G3DSA:3.40.50.10490 11 496 7.6E-214 T 12-10-2018 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 Gene3D G3DSA:3.40.50.10490 96 289 7.6E-214 T 12-10-2018 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 8.8E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 8.8E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 148 167 8.8E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 487 500 8.8E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 455 473 8.8E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 473 487 8.8E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 Pfam PF00342 Phosphoglucose isomerase 50 532 2.2E-193 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 44 514 39.227 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 SUPERFAMILY SSF53697 5 539 4.79E-191 T 12-10-2018 Acife_0784 bac8e717a7e72c7ad0dfe232a0fd9c18 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_1230 644c39c95566c3a3c9013815c30fe7bd 661 Gene3D G3DSA:1.10.10.160 111 181 1.2E-88 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily Acife_1230 644c39c95566c3a3c9013815c30fe7bd 661 Gene3D G3DSA:1.10.486.10 377 539 1.1E-117 T 12-10-2018 Acife_1230 644c39c95566c3a3c9013815c30fe7bd 661 Gene3D G3DSA:3.40.50.300 7 266 1.2E-88 T 12-10-2018 Acife_1230 644c39c95566c3a3c9013815c30fe7bd 661 SUPERFAMILY SSF52540 4 634 6.56E-161 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1230 644c39c95566c3a3c9013815c30fe7bd 661 Gene3D G3DSA:3.40.50.300 274 627 1.1E-117 T 12-10-2018 Acife_1230 644c39c95566c3a3c9013815c30fe7bd 661 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 4 659 36.728 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 Acife_1230 644c39c95566c3a3c9013815c30fe7bd 661 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 265 2.4E-69 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Acife_1230 644c39c95566c3a3c9013815c30fe7bd 661 Pfam PF13361 UvrD-like helicase C-terminal domain 271 608 4.8E-68 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Acife_0359 e8d7b94be552f5dbb76a5be52e854cad 169 Pfam PF00216 Bacterial DNA-binding protein 3 96 2.6E-24 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0359 e8d7b94be552f5dbb76a5be52e854cad 169 Gene3D G3DSA:4.10.520.10 1 101 2.1E-29 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_0359 e8d7b94be552f5dbb76a5be52e854cad 169 SUPERFAMILY SSF47729 3 97 1.06E-23 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_0359 e8d7b94be552f5dbb76a5be52e854cad 169 SMART SM00411 2 97 2.8E-27 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0359 e8d7b94be552f5dbb76a5be52e854cad 169 PRINTS PR01727 Prokaryotic integration host factor signature 81 95 1.7E-12 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0359 e8d7b94be552f5dbb76a5be52e854cad 169 PRINTS PR01727 Prokaryotic integration host factor signature 47 62 1.7E-12 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0359 e8d7b94be552f5dbb76a5be52e854cad 169 PRINTS PR01727 Prokaryotic integration host factor signature 65 78 1.7E-12 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0252 afbeda748d5a81d25f723b5bc9a128f1 1120 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 7 83 2.0E-24 T 12-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Acife_0252 afbeda748d5a81d25f723b5bc9a128f1 1120 SMART SM00460 172 248 2.4E-18 T 12-10-2018 IPR002931 Transglutaminase-like Acife_0252 afbeda748d5a81d25f723b5bc9a128f1 1120 SUPERFAMILY SSF54001 9 337 7.99E-69 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Acife_0252 afbeda748d5a81d25f723b5bc9a128f1 1120 Pfam PF01841 Transglutaminase-like superfamily 133 246 1.7E-19 T 12-10-2018 IPR002931 Transglutaminase-like Acife_0252 afbeda748d5a81d25f723b5bc9a128f1 1120 Gene3D G3DSA:3.10.620.30 101 280 7.5E-30 T 12-10-2018 Acife_0252 afbeda748d5a81d25f723b5bc9a128f1 1120 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1112 0.0 T 12-10-2018 IPR018667 Domain of unknown function DUF2126 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 PRINTS PR00148 Enolase signature 333 347 6.0E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 PRINTS PR00148 Enolase signature 160 173 6.0E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 PRINTS PR00148 Enolase signature 362 379 6.0E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 PRINTS PR00148 Enolase signature 37 51 6.0E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 PRINTS PR00148 Enolase signature 310 321 6.0E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 PRINTS PR00148 Enolase signature 106 122 6.0E-43 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 SMART SM01193 4 133 1.1E-89 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 SUPERFAMILY SSF51604 139 425 1.08E-126 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Acife_1359 25896786501fa8060a8e5c867eef10c2 426 ProSitePatterns PS00164 Enolase signature. 333 346 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 PIRSF PIRSF001400 1 424 6.0E-186 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 Gene3D G3DSA:3.20.20.120 127 426 6.3E-133 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Acife_1359 25896786501fa8060a8e5c867eef10c2 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 421 1.2E-129 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 424 3.6E-204 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 SMART SM01192 138 424 2.9E-219 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 Pfam PF03952 Enolase, N-terminal domain 4 133 7.9E-58 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 SUPERFAMILY SSF54826 4 136 6.59E-52 T 12-10-2018 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 Hamap MF_00318 Enolase [eno]. 2 410 43.778 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_1359 25896786501fa8060a8e5c867eef10c2 426 Gene3D G3DSA:3.30.390.10 1 126 1.7E-52 T 12-10-2018 IPR029017 Enolase-like, N-terminal Acife_1396 524e92c35061fb5cfd29969c049da676 101 Gene3D G3DSA:4.10.520.10 1 92 5.8E-33 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_1396 524e92c35061fb5cfd29969c049da676 101 SUPERFAMILY SSF47729 1 91 3.09E-30 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_1396 524e92c35061fb5cfd29969c049da676 101 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.1E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1396 524e92c35061fb5cfd29969c049da676 101 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.1E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1396 524e92c35061fb5cfd29969c049da676 101 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.1E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1396 524e92c35061fb5cfd29969c049da676 101 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.4E-30 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1396 524e92c35061fb5cfd29969c049da676 101 SMART SM00411 1 91 1.5E-39 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1396 524e92c35061fb5cfd29969c049da676 101 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 8.3E-37 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Gene3D G3DSA:1.10.150.20 434 507 2.0E-27 T 12-10-2018 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 10 319 1.0E-116 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 SUPERFAMILY SSF52113 591 669 8.97E-17 T 12-10-2018 IPR036420 BRCT domain superfamily Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Gene3D G3DSA:2.40.50.140 321 393 4.3E-31 T 12-10-2018 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Gene3D G3DSA:1.10.287.610 9 72 1.1E-24 T 12-10-2018 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 SMART SM00532 7 450 1.5E-236 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Gene3D G3DSA:1.10.150.20 508 586 3.0E-28 T 12-10-2018 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 SUPERFAMILY SSF47781 406 585 2.52E-57 T 12-10-2018 IPR010994 RuvA domain 2-like Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 SUPERFAMILY SSF56091 9 318 1.52E-111 T 12-10-2018 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Hamap MF_01588 DNA ligase [ligA]. 7 667 50.237 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 SMART SM00292 593 670 1.9E-11 T 12-10-2018 IPR001357 BRCT domain Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 118 147 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Pfam PF14520 Helix-hairpin-helix domain 448 502 9.2E-6 T 12-10-2018 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 PIRSF PIRSF001604 2 671 1.1E-235 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 15 663 2.1E-241 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 436 1.8E-8 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Gene3D G3DSA:2.20.70.80 394 432 1.8E-11 T 12-10-2018 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 333 348 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 SMART SM00278 514 533 340.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 SMART SM00278 546 565 15.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 SMART SM00278 448 467 7.5 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 SMART SM00278 482 501 720.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Gene3D G3DSA:3.40.50.10190 587 670 4.5E-26 T 12-10-2018 IPR036420 BRCT domain superfamily Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 324 397 1.1E-32 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 SUPERFAMILY SSF50249 321 401 1.4E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Pfam PF12826 Helix-hairpin-helix motif 512 575 3.4E-23 T 12-10-2018 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Gene3D G3DSA:3.30.470.90 73 320 2.7E-90 T 12-10-2018 Acife_1605 973b983ed6d93f34ef7b994396b0010c 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 593 666 1.9E-11 T 12-10-2018 IPR001357 BRCT domain Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 Gene3D G3DSA:3.40.1110.10 357 473 8.0E-84 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 SUPERFAMILY SSF81653 157 254 2.09E-25 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 105 644 1.5E-169 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 127 620 1.7E-79 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 Pfam PF00122 E1-E2 ATPase 155 326 4.5E-45 T 12-10-2018 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 ProSitePatterns PS01229 Hypothetical cof family signature 2. 541 563 - T 12-10-2018 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 Gene3D G3DSA:2.70.150.20 148 259 4.7E-35 T 12-10-2018 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 SUPERFAMILY SSF56784 344 640 6.6E-53 T 12-10-2018 IPR036412 HAD-like superfamily Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 105 645 1.4E-135 T 12-10-2018 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 Pfam PF00702 haloacid dehalogenase-like hydrolase 344 555 4.3E-40 T 12-10-2018 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 541 557 2.7E-5 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 513 529 2.7E-5 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 SUPERFAMILY SSF81665 107 619 7.19E-9 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 348 354 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 86 644 5.1E-127 T 12-10-2018 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 541 560 1.9E-20 T 12-10-2018 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 565 577 1.9E-20 T 12-10-2018 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 346 360 1.9E-20 T 12-10-2018 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 466 477 1.9E-20 T 12-10-2018 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 204 218 1.9E-20 T 12-10-2018 Acife_0825 e1b05fc5a14a306a661552fdcf896f0c 668 Gene3D G3DSA:3.40.50.1000 327 594 8.0E-84 T 12-10-2018 IPR023214 HAD superfamily Acife_2316 1bfeb82940cd2a9ebd1ed2829f32742f 722 SUPERFAMILY SSF53448 443 593 1.86E-6 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2316 1bfeb82940cd2a9ebd1ed2829f32742f 722 Gene3D G3DSA:3.90.550.20 407 503 2.5E-5 T 12-10-2018 Acife_2316 1bfeb82940cd2a9ebd1ed2829f32742f 722 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 251 315 1.2E-4 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Acife_2316 1bfeb82940cd2a9ebd1ed2829f32742f 722 Pfam PF05704 Capsular polysaccharide synthesis protein 358 550 3.0E-14 T 12-10-2018 IPR008441 Capsular polysaccharide synthesis protein Acife_2316 1bfeb82940cd2a9ebd1ed2829f32742f 722 Gene3D G3DSA:3.40.50.2000 195 357 1.7E-8 T 12-10-2018 Acife_2316 1bfeb82940cd2a9ebd1ed2829f32742f 722 SUPERFAMILY SSF53756 52 358 5.65E-22 T 12-10-2018 Acife_2207 6adfc9de0d868688016e319d09069941 412 Pfam PF03453 MoeA N-terminal region (domain I and II) 17 173 4.3E-44 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2207 6adfc9de0d868688016e319d09069941 412 SMART SM00852 186 323 7.8E-42 T 12-10-2018 IPR001453 MoaB/Mog domain Acife_2207 6adfc9de0d868688016e319d09069941 412 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 259 292 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Acife_2207 6adfc9de0d868688016e319d09069941 412 Gene3D G3DSA:3.90.105.10 34 180 1.2E-136 T 12-10-2018 Acife_2207 6adfc9de0d868688016e319d09069941 412 SUPERFAMILY SSF53218 183 327 3.4E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Acife_2207 6adfc9de0d868688016e319d09069941 412 Pfam PF03454 MoeA C-terminal region (domain IV) 338 408 9.4E-17 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2207 6adfc9de0d868688016e319d09069941 412 SUPERFAMILY SSF63882 16 182 3.14E-52 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2207 6adfc9de0d868688016e319d09069941 412 SUPERFAMILY SSF63867 335 411 2.88E-19 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2207 6adfc9de0d868688016e319d09069941 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 183 319 1.7E-31 T 12-10-2018 IPR001453 MoaB/Mog domain Acife_2207 6adfc9de0d868688016e319d09069941 412 Gene3D G3DSA:3.40.980.10 181 333 1.2E-136 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Acife_2207 6adfc9de0d868688016e319d09069941 412 Gene3D G3DSA:2.40.340.10 334 403 1.2E-136 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2207 6adfc9de0d868688016e319d09069941 412 Pfam PF00994 Probable molybdopterin binding domain 188 321 8.1E-27 T 12-10-2018 IPR001453 MoaB/Mog domain Acife_2207 6adfc9de0d868688016e319d09069941 412 Gene3D G3DSA:2.170.190.11 58 147 1.2E-136 T 12-10-2018 Acife_2010 bf7c0c77e271083c236080d9b7625f9e 507 SUPERFAMILY SSF64158 77 300 5.62E-67 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_2010 bf7c0c77e271083c236080d9b7625f9e 507 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 502 43.195 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_2010 bf7c0c77e271083c236080d9b7625f9e 507 Gene3D G3DSA:3.40.1450.10 77 302 1.4E-192 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_2010 bf7c0c77e271083c236080d9b7625f9e 507 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 289 2.9E-63 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_2010 bf7c0c77e271083c236080d9b7625f9e 507 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 501 4.8E-181 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_2010 bf7c0c77e271083c236080d9b7625f9e 507 PIRSF PIRSF001492 1 504 8.0E-176 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_2010 bf7c0c77e271083c236080d9b7625f9e 507 Gene3D G3DSA:3.40.720.10 5 501 1.4E-192 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Acife_2010 bf7c0c77e271083c236080d9b7625f9e 507 Pfam PF01676 Metalloenzyme superfamily 5 490 8.9E-67 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Acife_2010 bf7c0c77e271083c236080d9b7625f9e 507 SUPERFAMILY SSF53649 4 501 7.33E-68 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 Gene3D G3DSA:3.40.50.720 1 245 2.8E-70 T 12-10-2018 Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 3.3E-52 T 12-10-2018 Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.1E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 8.1E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.1E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.1E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 8.1E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.1E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 SUPERFAMILY SSF51735 5 245 1.01E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0030 ad0d1f1d6ac798102b450e9484df03fb 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Acife_2848 e2e257e89f39adf68597e39d09929356 788 SUPERFAMILY SSF82866 609 775 3.79E-20 T 12-10-2018 Acife_2848 e2e257e89f39adf68597e39d09929356 788 Pfam PF03176 MMPL family 127 391 3.1E-9 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Acife_2848 e2e257e89f39adf68597e39d09929356 788 Pfam PF03176 MMPL family 609 777 1.2E-7 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Acife_2848 e2e257e89f39adf68597e39d09929356 788 SUPERFAMILY SSF82866 192 398 3.79E-15 T 12-10-2018 Acife_3196 b83c1acb5ddea62af8f7088c386e3cf0 249 SUPERFAMILY SSF81336 81 241 9.29E-39 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3196 b83c1acb5ddea62af8f7088c386e3cf0 249 Pfam PF00119 ATP synthase A chain 28 241 1.8E-49 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3196 b83c1acb5ddea62af8f7088c386e3cf0 249 ProSitePatterns PS00449 ATP synthase a subunit signature. 184 193 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3196 b83c1acb5ddea62af8f7088c386e3cf0 249 PRINTS PR00123 ATP synthase A subunit signature 161 176 4.1E-16 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3196 b83c1acb5ddea62af8f7088c386e3cf0 249 PRINTS PR00123 ATP synthase A subunit signature 181 203 4.1E-16 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3196 b83c1acb5ddea62af8f7088c386e3cf0 249 PRINTS PR00123 ATP synthase A subunit signature 228 243 4.1E-16 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3196 b83c1acb5ddea62af8f7088c386e3cf0 249 PRINTS PR00123 ATP synthase A subunit signature 85 101 4.1E-16 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3196 b83c1acb5ddea62af8f7088c386e3cf0 249 Gene3D G3DSA:1.20.120.220 77 249 8.1E-50 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3196 b83c1acb5ddea62af8f7088c386e3cf0 249 Hamap MF_01393 ATP synthase subunit a [atpB]. 6 248 14.18 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3196 b83c1acb5ddea62af8f7088c386e3cf0 249 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 19 242 3.0E-39 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 Pfam PF00696 Amino acid kinase family 19 254 4.9E-46 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 ProSitePatterns PS00902 Glutamate 5-kinase signature. 226 243 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 TIGRFAM TIGR01027 proB: glutamate 5-kinase 19 384 3.3E-116 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 Pfam PF01472 PUA domain 296 366 3.7E-15 T 12-10-2018 IPR002478 PUA domain GO:0003723 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 2.5E-38 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 PRINTS PR00474 Glutamate 5-kinase family signature 167 194 2.5E-38 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 PRINTS PR00474 Glutamate 5-kinase family signature 228 248 2.5E-38 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 PRINTS PR00474 Glutamate 5-kinase family signature 135 156 2.5E-38 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 SMART SM00359 296 375 4.8E-9 T 12-10-2018 IPR002478 PUA domain GO:0003723 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 PIRSF PIRSF000729 13 387 8.3E-120 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 SUPERFAMILY SSF53633 18 275 1.57E-68 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 SUPERFAMILY SSF88697 296 365 3.85E-16 T 12-10-2018 IPR015947 PUA-like superfamily Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 Gene3D G3DSA:2.30.130.10 285 386 1.4E-24 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 Hamap MF_00456 Glutamate 5-kinase [proB]. 18 281 34.218 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Acife_2038 784ac67700271ec7c857f8f5fc1f8f3d 397 Gene3D G3DSA:3.40.1160.10 12 283 1.5E-89 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.4E-26 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 329 1.4E-26 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 25 44 1.4E-26 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 294 1.4E-26 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 193 211 1.4E-26 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 Gene3D G3DSA:3.50.50.60 165 285 1.8E-80 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 SUPERFAMILY SSF51905 18 350 2.73E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PIRSF PIRSF000350 7 458 1.6E-61 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 SUPERFAMILY SSF55424 358 474 1.13E-20 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 56 71 5.6E-49 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 438 5.6E-49 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 193 218 5.6E-49 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 322 329 5.6E-49 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 24 46 5.6E-49 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 293 5.6E-49 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 358 379 5.6E-49 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 5.6E-49 T 12-10-2018 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 57 67 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 Gene3D G3DSA:3.50.50.60 23 348 1.8E-80 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 Gene3D G3DSA:3.30.390.30 361 479 3.3E-20 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 362 470 3.8E-15 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Acife_1801 b0d4a0fa1103d4525ed075c9fcd7c5f0 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 23 341 5.0E-44 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_2558 5d85a14f61904b07833ced1747bfc50a 279 Gene3D G3DSA:3.20.20.20 2 278 7.7E-105 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Acife_2558 5d85a14f61904b07833ced1747bfc50a 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 19 34 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Acife_2558 5d85a14f61904b07833ced1747bfc50a 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 53 66 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Acife_2558 5d85a14f61904b07833ced1747bfc50a 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 19 274 2.0E-95 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Acife_2558 5d85a14f61904b07833ced1747bfc50a 279 Pfam PF00809 Pterin binding enzyme 20 261 1.4E-82 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Acife_2558 5d85a14f61904b07833ced1747bfc50a 279 SUPERFAMILY SSF51717 7 275 1.11E-98 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Acife_0425 f40d9aef676eff488abeecc4a801fb36 408 Gene3D G3DSA:2.40.128.260 238 398 1.9E-6 T 12-10-2018 Acife_0425 f40d9aef676eff488abeecc4a801fb36 408 Gene3D G3DSA:1.10.1200.160 353 384 1.9E-6 T 12-10-2018 Acife_0425 f40d9aef676eff488abeecc4a801fb36 408 Pfam PF03743 Bacterial conjugation TrbI-like protein 230 400 1.7E-12 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Acife_2283 be72596b36e18437b87c72295a628273 551 Hamap MF_00600 60 kDa chaperonin [groL]. 2 548 41.672 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Acife_2283 be72596b36e18437b87c72295a628273 551 Gene3D G3DSA:1.10.560.10 8 521 3.4E-239 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily Acife_2283 be72596b36e18437b87c72295a628273 551 Gene3D G3DSA:3.50.7.10 192 372 3.4E-239 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily Acife_2283 be72596b36e18437b87c72295a628273 551 SUPERFAMILY SSF48592 11 521 1.08E-76 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily Acife_2283 be72596b36e18437b87c72295a628273 551 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Acife_2283 be72596b36e18437b87c72295a628273 551 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Acife_2283 be72596b36e18437b87c72295a628273 551 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Acife_2283 be72596b36e18437b87c72295a628273 551 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Acife_2283 be72596b36e18437b87c72295a628273 551 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Acife_2283 be72596b36e18437b87c72295a628273 551 SUPERFAMILY SSF54849 137 204 1.1E-24 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Acife_2283 be72596b36e18437b87c72295a628273 551 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Acife_2283 be72596b36e18437b87c72295a628273 551 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 1.2E-95 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Acife_2283 be72596b36e18437b87c72295a628273 551 Gene3D G3DSA:3.30.260.10 136 410 3.4E-239 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Acife_2283 be72596b36e18437b87c72295a628273 551 SUPERFAMILY SSF52029 185 376 4.34E-84 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily Acife_2283 be72596b36e18437b87c72295a628273 551 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 6.0E-259 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Acife_1575 227b43732239b5ff568659121b4370ca 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 93 1.6E-18 T 12-10-2018 IPR007711 Toxin HigB-1 Acife_1575 227b43732239b5ff568659121b4370ca 93 SUPERFAMILY SSF143011 1 93 3.14E-17 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_1575 227b43732239b5ff568659121b4370ca 93 Gene3D G3DSA:3.30.2310.20 1 93 1.9E-25 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_0627 1bd6abfe69b3f84c6c7a5c0f19ada026 430 Gene3D G3DSA:3.40.718.10 2 430 7.1E-176 T 12-10-2018 Acife_0627 1bd6abfe69b3f84c6c7a5c0f19ada026 430 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 317 336 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Acife_0627 1bd6abfe69b3f84c6c7a5c0f19ada026 430 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 5 429 2.6E-193 T 12-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Acife_0627 1bd6abfe69b3f84c6c7a5c0f19ada026 430 SMART SM01329 29 426 5.4E-171 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Acife_0627 1bd6abfe69b3f84c6c7a5c0f19ada026 430 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 423 1.4E-105 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Acife_0627 1bd6abfe69b3f84c6c7a5c0f19ada026 430 SUPERFAMILY SSF53659 4 430 1.34E-134 T 12-10-2018 Acife_0151 6a45c45a19099364c8afd159568db397 555 SUPERFAMILY SSF52540 302 522 1.83E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0151 6a45c45a19099364c8afd159568db397 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 4.4E-288 T 12-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 Acife_0151 6a45c45a19099364c8afd159568db397 555 Pfam PF00005 ABC transporter 340 473 9.8E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_0151 6a45c45a19099364c8afd159568db397 555 SUPERFAMILY SSF52540 8 237 9.16E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0151 6a45c45a19099364c8afd159568db397 555 Gene3D G3DSA:3.40.50.300 1 285 3.4E-79 T 12-10-2018 Acife_0151 6a45c45a19099364c8afd159568db397 555 Gene3D G3DSA:3.40.50.300 286 552 1.7E-71 T 12-10-2018 Acife_0151 6a45c45a19099364c8afd159568db397 555 Pfam PF12848 ABC transporter 230 305 1.1E-11 T 12-10-2018 IPR032781 ABC-transporter extension domain Acife_0151 6a45c45a19099364c8afd159568db397 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_0151 6a45c45a19099364c8afd159568db397 555 Pfam PF00005 ABC transporter 22 191 8.5E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_0151 6a45c45a19099364c8afd159568db397 555 SMART SM00382 31 242 5.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0151 6a45c45a19099364c8afd159568db397 555 SMART SM00382 348 526 1.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1055 fe4ed7b93bc00c2f8df87fc51787ac11 296 Gene3D G3DSA:1.10.620.20 28 295 3.8E-6 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Acife_1055 fe4ed7b93bc00c2f8df87fc51787ac11 296 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 19 293 6.7E-47 T 12-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF Acife_1055 fe4ed7b93bc00c2f8df87fc51787ac11 296 SUPERFAMILY SSF47240 33 276 1.11E-5 T 12-10-2018 IPR009078 Ferritin-like superfamily Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 Pfam PF00574 Clp protease 28 207 1.6E-87 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 105 116 - T 12-10-2018 IPR018215 ClpP, Ser active site Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 18 208 43.661 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 127 140 - T 12-10-2018 IPR033135 ClpP, histidine active site Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 Gene3D G3DSA:3.90.226.10 9 210 2.2E-83 T 12-10-2018 Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 SUPERFAMILY SSF52096 25 209 1.78E-73 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 PRINTS PR00127 Clp protease catalytic subunit P signature 34 49 1.2E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 PRINTS PR00127 Clp protease catalytic subunit P signature 183 202 1.2E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 PRINTS PR00127 Clp protease catalytic subunit P signature 105 122 1.2E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 PRINTS PR00127 Clp protease catalytic subunit P signature 126 145 1.2E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 PRINTS PR00127 Clp protease catalytic subunit P signature 74 94 1.2E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Acife_1401 d410b6beb6bd0484df091c9c5863115c 214 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 18 207 8.8E-102 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Acife_1244 a5126d3679052aa5b38b9d2d5c0bc361 516 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 30 140 1.8E-13 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1244 a5126d3679052aa5b38b9d2d5c0bc361 516 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 286 511 5.6E-29 T 12-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1244 a5126d3679052aa5b38b9d2d5c0bc361 516 Gene3D G3DSA:1.10.645.20 162 515 1.3E-95 T 12-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1244 a5126d3679052aa5b38b9d2d5c0bc361 516 SUPERFAMILY SSF143243 30 175 7.98E-25 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1244 a5126d3679052aa5b38b9d2d5c0bc361 516 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 141 9.0E-7 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1244 a5126d3679052aa5b38b9d2d5c0bc361 516 SUPERFAMILY SSF56762 171 515 1.96E-86 T 12-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 SUPERFAMILY SSF82714 708 793 1.57E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 Gene3D G3DSA:3.30.70.1440 657 852 1.0E-276 T 12-10-2018 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.7E-69 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 2.7E-69 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.7E-69 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.7E-69 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 2.7E-69 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 2.7E-69 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.7E-69 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 2.7E-69 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.7E-69 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 Gene3D G3DSA:3.30.70.1430 559 656 1.0E-276 T 12-10-2018 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 Gene3D G3DSA:1.20.1640.10 505 1010 1.0E-276 T 12-10-2018 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 SUPERFAMILY SSF82866 295 494 7.46E-48 T 12-10-2018 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 SUPERFAMILY SSF82693 557 659 1.26E-15 T 12-10-2018 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 Gene3D G3DSA:3.30.2090.10 182 273 1.0E-276 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 Gene3D G3DSA:3.30.70.1430 40 803 1.0E-276 T 12-10-2018 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 SUPERFAMILY SSF82866 791 1015 7.46E-40 T 12-10-2018 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 5.9E-254 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 Gene3D G3DSA:1.20.1640.10 10 504 1.0E-276 T 12-10-2018 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 Gene3D G3DSA:3.30.2090.10 707 795 1.0E-276 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 SUPERFAMILY SSF82693 42 132 4.97E-22 T 12-10-2018 Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 SUPERFAMILY SSF82714 187 270 2.35E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_1415 4c9f0837072b935ef0cecf5688d50b53 1026 Gene3D G3DSA:3.30.70.1320 134 330 1.0E-276 T 12-10-2018 Acife_2264 f4d2099aeff76db031033d262b9cb0d2 589 Pfam PF03023 MviN-like protein 103 550 1.9E-137 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Acife_2264 f4d2099aeff76db031033d262b9cb0d2 589 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 81 581 3.3E-145 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Acife_2264 f4d2099aeff76db031033d262b9cb0d2 589 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 78 541 20.047 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Acife_2264 f4d2099aeff76db031033d262b9cb0d2 589 PRINTS PR01806 Virulence factor MviN signature 127 143 5.6E-77 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Acife_2264 f4d2099aeff76db031033d262b9cb0d2 589 PRINTS PR01806 Virulence factor MviN signature 334 360 5.6E-77 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Acife_2264 f4d2099aeff76db031033d262b9cb0d2 589 PRINTS PR01806 Virulence factor MviN signature 431 450 5.6E-77 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Acife_2264 f4d2099aeff76db031033d262b9cb0d2 589 PRINTS PR01806 Virulence factor MviN signature 108 127 5.6E-77 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Acife_2264 f4d2099aeff76db031033d262b9cb0d2 589 PRINTS PR01806 Virulence factor MviN signature 208 232 5.6E-77 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Acife_2264 f4d2099aeff76db031033d262b9cb0d2 589 PRINTS PR01806 Virulence factor MviN signature 483 500 5.6E-77 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Acife_2264 f4d2099aeff76db031033d262b9cb0d2 589 PRINTS PR01806 Virulence factor MviN signature 232 253 5.6E-77 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Acife_1859 488b24945039e773de17c354b16a1ed0 212 Gene3D G3DSA:2.60.120.620 8 192 2.0E-47 T 12-10-2018 Acife_1859 488b24945039e773de17c354b16a1ed0 212 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 92 192 1.2E-15 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 Acife_1859 488b24945039e773de17c354b16a1ed0 212 SMART SM00702 12 192 5.1E-36 T 12-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 Acife_1634 d5cbf8a76099458c6729308f4ff8776e 386 Gene3D G3DSA:1.10.238.260 276 385 9.8E-25 T 12-10-2018 Acife_1634 d5cbf8a76099458c6729308f4ff8776e 386 SUPERFAMILY SSF51569 13 286 4.03E-79 T 12-10-2018 Acife_1634 d5cbf8a76099458c6729308f4ff8776e 386 Pfam PF00682 HMGL-like 14 269 4.0E-81 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Acife_1634 d5cbf8a76099458c6729308f4ff8776e 386 Gene3D G3DSA:3.20.20.70 8 274 4.9E-83 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1634 d5cbf8a76099458c6729308f4ff8776e 386 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 13 374 7.0E-156 T 12-10-2018 IPR013477 Homocitrate synthase NifV-like GO:0046912|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 Acife_1634 d5cbf8a76099458c6729308f4ff8776e 386 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_1634 d5cbf8a76099458c6729308f4ff8776e 386 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_0983 25dd9427b2864595248aa02004e53f8c 327 SUPERFAMILY SSF52540 123 298 1.44E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0983 25dd9427b2864595248aa02004e53f8c 327 Gene3D G3DSA:3.40.50.300 115 321 2.0E-74 T 12-10-2018 Acife_0983 25dd9427b2864595248aa02004e53f8c 327 Pfam PF02562 PhoH-like protein 118 321 1.6E-92 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 Acife_0254 2d84642a2ba0c4a3825db9c52d27013c 487 Gene3D G3DSA:3.40.50.11290 218 316 1.3E-36 T 12-10-2018 Acife_0254 2d84642a2ba0c4a3825db9c52d27013c 487 Pfam PF14403 Circularly permuted ATP-grasp type 2 80 456 8.3E-159 T 12-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Acife_0254 2d84642a2ba0c4a3825db9c52d27013c 487 Gene3D G3DSA:3.30.1490.270 353 413 2.9E-25 T 12-10-2018 Acife_0254 2d84642a2ba0c4a3825db9c52d27013c 487 PIRSF PIRSF005522 1 483 1.1E-216 T 12-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 Acife_0254 2d84642a2ba0c4a3825db9c52d27013c 487 SUPERFAMILY SSF56059 34 471 4.2E-62 T 12-10-2018 Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 Gene3D G3DSA:3.40.50.720 1 253 7.4E-81 T 12-10-2018 Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 7.1E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 7.1E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 7.1E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 191 8.4E-4 T 12-10-2018 Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 9.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 9.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 9.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 9.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 9.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 9.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 251 9.3E-63 T 12-10-2018 Acife_2346 b6a041bf010e08cb93bab5c3b02f7b12 254 SUPERFAMILY SSF51735 9 252 6.11E-82 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2429 620f498beef276b5db9033e4c7a6e11e 87 Pfam PF04380 Membrane fusogenic activity 2 74 2.1E-22 T 12-10-2018 IPR007475 Membrane fusogenic activity Acife_0051 7d55c919d0b7cd684f94daeacb938876 361 SUPERFAMILY SSF111369 60 274 1.18E-36 T 12-10-2018 Acife_0051 7d55c919d0b7cd684f94daeacb938876 361 Gene3D G3DSA:2.40.50.100 68 196 3.2E-67 T 12-10-2018 Acife_0051 7d55c919d0b7cd684f94daeacb938876 361 Gene3D G3DSA:1.10.287.470 103 162 3.2E-67 T 12-10-2018 Acife_0051 7d55c919d0b7cd684f94daeacb938876 361 Gene3D G3DSA:2.40.30.170 58 279 3.2E-67 T 12-10-2018 Acife_0051 7d55c919d0b7cd684f94daeacb938876 361 Gene3D G3DSA:2.40.420.20 280 353 3.2E-67 T 12-10-2018 Acife_0051 7d55c919d0b7cd684f94daeacb938876 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 269 1.0E-22 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_0051 7d55c919d0b7cd684f94daeacb938876 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 355 1.6E-75 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Acife_3103 33995d72d31bec9a59a17559a7c452b0 135 Pfam PF12836 Helix-hairpin-helix motif 23 82 3.4E-22 T 12-10-2018 Acife_3103 33995d72d31bec9a59a17559a7c452b0 135 Gene3D G3DSA:1.10.150.320 15 83 1.7E-22 T 12-10-2018 Acife_3103 33995d72d31bec9a59a17559a7c452b0 135 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 22 80 1.4E-16 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Acife_3103 33995d72d31bec9a59a17559a7c452b0 135 SUPERFAMILY SSF47781 23 85 3.11E-26 T 12-10-2018 IPR010994 RuvA domain 2-like Acife_2647 00b06fe4cf49b981e4013725ebb453bf 89 SUPERFAMILY SSF47060 3 89 8.83E-34 T 12-10-2018 IPR009068 S15/NS1, RNA-binding Acife_2647 00b06fe4cf49b981e4013725ebb453bf 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.9E-37 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2647 00b06fe4cf49b981e4013725ebb453bf 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.442 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2647 00b06fe4cf49b981e4013725ebb453bf 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 9.0E-20 T 12-10-2018 Acife_2647 00b06fe4cf49b981e4013725ebb453bf 89 SMART SM01387 8 88 5.3E-50 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2647 00b06fe4cf49b981e4013725ebb453bf 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2647 00b06fe4cf49b981e4013725ebb453bf 89 Gene3D G3DSA:1.10.287.10 2 89 1.7E-33 T 12-10-2018 Acife_2647 00b06fe4cf49b981e4013725ebb453bf 89 Pfam PF00312 Ribosomal protein S15 8 88 2.6E-35 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_0061 478e950eb4c45ddc8194884db7a7c00b 451 Pfam PF03573 outer membrane porin, OprD family 27 182 4.8E-7 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 Acife_0061 478e950eb4c45ddc8194884db7a7c00b 451 Gene3D G3DSA:2.40.160.10 22 313 1.9E-18 T 12-10-2018 IPR023614 Porin domain superfamily Acife_2185 546282919274c59f50415f8bb9f19162 316 SUPERFAMILY SSF82866 73 296 1.57E-40 T 12-10-2018 Acife_2185 546282919274c59f50415f8bb9f19162 316 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 285 6.3E-79 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Acife_2185 546282919274c59f50415f8bb9f19162 316 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 118 282 2.6E-55 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Acife_2185 546282919274c59f50415f8bb9f19162 316 Pfam PF02355 Protein export membrane protein 116 293 6.3E-68 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Acife_2185 546282919274c59f50415f8bb9f19162 316 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 296 29.675 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Acife_2185 546282919274c59f50415f8bb9f19162 316 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.0E-31 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Acife_2185 546282919274c59f50415f8bb9f19162 316 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 1.0E-31 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Acife_2185 546282919274c59f50415f8bb9f19162 316 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 1.0E-31 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Acife_2185 546282919274c59f50415f8bb9f19162 316 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 1.0E-31 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Acife_2185 546282919274c59f50415f8bb9f19162 316 Gene3D G3DSA:1.20.1640.10 99 304 3.6E-9 T 12-10-2018 Acife_2185 546282919274c59f50415f8bb9f19162 316 Pfam PF07549 SecD/SecF GG Motif 34 58 3.9E-9 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Acife_0607 681f3f68baf1f4458ce2c96e73c56297 710 Gene3D G3DSA:2.60.40.10 1 145 9.8E-50 T 12-10-2018 IPR013783 Immunoglobulin-like fold Acife_0607 681f3f68baf1f4458ce2c96e73c56297 710 SUPERFAMILY SSF51445 143 581 2.15E-128 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Acife_0607 681f3f68baf1f4458ce2c96e73c56297 710 SMART SM00642 142 567 2.6E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Acife_0607 681f3f68baf1f4458ce2c96e73c56297 710 SUPERFAMILY SSF81296 9 156 8.12E-49 T 12-10-2018 IPR014756 Immunoglobulin E-set Acife_0607 681f3f68baf1f4458ce2c96e73c56297 710 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 14 102 1.1E-19 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Acife_0607 681f3f68baf1f4458ce2c96e73c56297 710 Gene3D G3DSA:2.60.40.1180 593 705 7.6E-16 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Acife_0607 681f3f68baf1f4458ce2c96e73c56297 710 SUPERFAMILY SSF51011 594 704 3.88E-21 T 12-10-2018 Acife_0607 681f3f68baf1f4458ce2c96e73c56297 710 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 10 704 0.0 T 12-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 Acife_0607 681f3f68baf1f4458ce2c96e73c56297 710 Gene3D G3DSA:3.20.20.80 146 587 5.7E-174 T 12-10-2018 Acife_0607 681f3f68baf1f4458ce2c96e73c56297 710 Pfam PF00128 Alpha amylase, catalytic domain 197 282 4.3E-10 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Acife_1804 59bd2e80a244de7123be518cc94109ad 453 Pfam PF00158 Sigma-54 interaction domain 130 296 2.3E-65 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Acife_1804 59bd2e80a244de7123be518cc94109ad 453 SUPERFAMILY SSF52540 130 370 2.28E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1804 59bd2e80a244de7123be518cc94109ad 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 340 349 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Acife_1804 59bd2e80a244de7123be518cc94109ad 453 SMART SM00382 150 293 3.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1804 59bd2e80a244de7123be518cc94109ad 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Acife_1804 59bd2e80a244de7123be518cc94109ad 453 Gene3D G3DSA:1.10.10.60 397 441 5.7E-9 T 12-10-2018 Acife_1804 59bd2e80a244de7123be518cc94109ad 453 Gene3D G3DSA:3.40.50.300 120 300 2.5E-63 T 12-10-2018 Acife_1804 59bd2e80a244de7123be518cc94109ad 453 Gene3D G3DSA:1.10.8.60 301 376 2.9E-19 T 12-10-2018 Acife_1804 59bd2e80a244de7123be518cc94109ad 453 SUPERFAMILY SSF46689 341 442 6.81E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_2644 ba02091c62b6fdcea002fa49827baa06 250 PIRSF PIRSF005457 1 249 5.3E-87 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Acife_2644 ba02091c62b6fdcea002fa49827baa06 250 Pfam PF00753 Metallo-beta-lactamase superfamily 13 84 2.2E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_2644 ba02091c62b6fdcea002fa49827baa06 250 SUPERFAMILY SSF56281 1 249 5.5E-66 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_2644 ba02091c62b6fdcea002fa49827baa06 250 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 162 249 1.8E-25 T 12-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Acife_2644 ba02091c62b6fdcea002fa49827baa06 250 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 249 40.493 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Acife_2644 ba02091c62b6fdcea002fa49827baa06 250 SMART SM00849 11 161 2.1E-31 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_2644 ba02091c62b6fdcea002fa49827baa06 250 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 3 249 4.5E-98 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Acife_2644 ba02091c62b6fdcea002fa49827baa06 250 Gene3D G3DSA:3.60.15.10 1 249 2.2E-81 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_1681 281ee335d8691ffee61e531795641357 492 SUPERFAMILY SSF48150 311 490 1.33E-38 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Acife_1681 281ee335d8691ffee61e531795641357 492 Pfam PF06029 AlkA N-terminal domain 201 321 4.0E-35 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Acife_1681 281ee335d8691ffee61e531795641357 492 Pfam PF02805 Metal binding domain of Ada 11 74 3.9E-28 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 Acife_1681 281ee335d8691ffee61e531795641357 492 Gene3D G3DSA:1.10.10.60 88 194 7.7E-19 T 12-10-2018 Acife_1681 281ee335d8691ffee61e531795641357 492 Pfam PF12833 Helix-turn-helix domain 111 187 2.1E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Acife_1681 281ee335d8691ffee61e531795641357 492 SUPERFAMILY SSF55945 201 302 1.16E-25 T 12-10-2018 Acife_1681 281ee335d8691ffee61e531795641357 492 SUPERFAMILY SSF57884 5 76 3.4E-30 T 12-10-2018 IPR035451 Ada-like domain superfamily Acife_1681 281ee335d8691ffee61e531795641357 492 SUPERFAMILY SSF46689 141 189 1.88E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_1681 281ee335d8691ffee61e531795641357 492 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 327 481 3.0E-6 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Acife_1681 281ee335d8691ffee61e531795641357 492 Gene3D G3DSA:1.10.340.30 322 442 8.4E-31 T 12-10-2018 Acife_1681 281ee335d8691ffee61e531795641357 492 SMART SM00478 331 492 3.6E-12 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Acife_1681 281ee335d8691ffee61e531795641357 492 Gene3D G3DSA:3.30.310.20 201 321 3.1E-33 T 12-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily Acife_1681 281ee335d8691ffee61e531795641357 492 SMART SM00342 104 187 3.3E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Acife_1681 281ee335d8691ffee61e531795641357 492 Gene3D G3DSA:1.10.1670.10 444 492 9.6E-13 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Acife_1681 281ee335d8691ffee61e531795641357 492 SMART SM01009 201 321 3.4E-48 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Acife_1681 281ee335d8691ffee61e531795641357 492 Gene3D G3DSA:3.40.10.10 2 75 1.1E-27 T 12-10-2018 IPR035451 Ada-like domain superfamily Acife_1106 c67ee451fbde09150333e002328373fd 352 Gene3D G3DSA:2.30.30.280 211 270 3.0E-14 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Acife_1106 c67ee451fbde09150333e002328373fd 352 Gene3D G3DSA:3.40.50.620 1 205 8.0E-78 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_1106 c67ee451fbde09150333e002328373fd 352 SUPERFAMILY SSF52402 3 240 6.17E-54 T 12-10-2018 Acife_1106 c67ee451fbde09150333e002328373fd 352 Pfam PF03054 tRNA methyl transferase 6 348 1.1E-111 T 12-10-2018 Acife_1106 c67ee451fbde09150333e002328373fd 352 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 348 1.1E-101 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Acife_1106 c67ee451fbde09150333e002328373fd 352 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 349 39.187 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Acife_1106 c67ee451fbde09150333e002328373fd 352 Gene3D G3DSA:2.40.30.10 272 352 1.2E-21 T 12-10-2018 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.2090.10 714 802 5.0E-255 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:1.20.1640.10 15 504 5.0E-255 T 12-10-2018 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.70.1320 135 327 5.0E-255 T 12-10-2018 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82866 799 1032 2.09E-44 T 12-10-2018 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.70.1440 663 861 5.0E-255 T 12-10-2018 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:1.20.1640.10 505 1025 5.0E-255 T 12-10-2018 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.70.1430 559 662 5.0E-255 T 12-10-2018 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82714 186 268 5.62E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.70.1430 42 810 5.0E-255 T 12-10-2018 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82693 42 127 3.14E-20 T 12-10-2018 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82866 293 496 8.11E-40 T 12-10-2018 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82693 138 325 6.8E-18 T 12-10-2018 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1032 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 Pfam PF00873 AcrB/AcrD/AcrF family 7 1027 8.2E-226 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.2090.10 182 273 5.0E-255 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82714 714 797 3.27E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0896 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.2090.10 714 802 5.0E-255 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:1.20.1640.10 15 504 5.0E-255 T 12-10-2018 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.70.1320 135 327 5.0E-255 T 12-10-2018 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82866 799 1032 2.09E-44 T 12-10-2018 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.70.1440 663 861 5.0E-255 T 12-10-2018 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:1.20.1640.10 505 1025 5.0E-255 T 12-10-2018 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.70.1430 559 662 5.0E-255 T 12-10-2018 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82714 186 268 5.62E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.70.1430 42 810 5.0E-255 T 12-10-2018 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82693 42 127 3.14E-20 T 12-10-2018 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82866 293 496 8.11E-40 T 12-10-2018 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82693 138 325 6.8E-18 T 12-10-2018 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1032 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 Pfam PF00873 AcrB/AcrD/AcrF family 7 1027 8.2E-226 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 Gene3D G3DSA:3.30.2090.10 182 273 5.0E-255 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 SUPERFAMILY SSF82714 714 797 3.27E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0812 76d9a655e5f9146870e10e47e97bdf50 1036 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_1423 51a80f0987f718e44332f3857b16ff7f 398 Pfam PF01145 SPFH domain / Band 7 family 84 266 2.6E-26 T 12-10-2018 IPR001107 Band 7 domain Acife_1423 51a80f0987f718e44332f3857b16ff7f 398 TIGRFAM TIGR01933 hflK: HflK protein 82 345 1.4E-81 T 12-10-2018 IPR010201 HflK GO:0016021 Acife_1423 51a80f0987f718e44332f3857b16ff7f 398 SMART SM00244 80 251 1.2E-24 T 12-10-2018 IPR001107 Band 7 domain Acife_1423 51a80f0987f718e44332f3857b16ff7f 398 Gene3D G3DSA:3.30.479.30 138 253 9.5E-16 T 12-10-2018 Acife_1423 51a80f0987f718e44332f3857b16ff7f 398 SUPERFAMILY SSF117892 141 255 8.11E-18 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily Acife_1385 815d9e0c933958bc34bb3f4d8ea16b99 407 Gene3D G3DSA:3.30.750.80 81 186 2.5E-31 T 12-10-2018 Acife_1385 815d9e0c933958bc34bb3f4d8ea16b99 407 SUPERFAMILY SSF88697 8 78 1.02E-8 T 12-10-2018 IPR015947 PUA-like superfamily Acife_1385 815d9e0c933958bc34bb3f4d8ea16b99 407 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 175 355 5.9E-18 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Acife_1385 815d9e0c933958bc34bb3f4d8ea16b99 407 SUPERFAMILY SSF53335 89 392 1.06E-68 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_1385 815d9e0c933958bc34bb3f4d8ea16b99 407 Gene3D G3DSA:2.30.130.10 5 79 1.6E-17 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 Acife_1385 815d9e0c933958bc34bb3f4d8ea16b99 407 Gene3D G3DSA:3.40.50.150 187 399 6.8E-67 T 12-10-2018 Acife_2852 2a625224ad75d4b01ed1f1c9fcabb918 453 Gene3D G3DSA:3.40.50.12780 5 333 1.7E-24 T 12-10-2018 Acife_2852 2a625224ad75d4b01ed1f1c9fcabb918 453 Pfam PF00501 AMP-binding enzyme 120 312 1.6E-16 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Acife_2852 2a625224ad75d4b01ed1f1c9fcabb918 453 Gene3D G3DSA:3.30.300.30 341 449 6.0E-12 T 12-10-2018 Acife_2852 2a625224ad75d4b01ed1f1c9fcabb918 453 SUPERFAMILY SSF56801 14 442 1.19E-48 T 12-10-2018 Acife_2186 6ccd1c0c56f39d95f76f5869297dd21a 594 Gene3D G3DSA:3.30.70.3400 218 414 1.3E-63 T 12-10-2018 Acife_2186 6ccd1c0c56f39d95f76f5869297dd21a 594 Pfam PF13721 SecD export protein N-terminal TM region 1 98 2.1E-20 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain Acife_2186 6ccd1c0c56f39d95f76f5869297dd21a 594 Gene3D G3DSA:3.30.1360.200 275 411 1.3E-63 T 12-10-2018 Acife_2186 6ccd1c0c56f39d95f76f5869297dd21a 594 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 343 572 6.8E-81 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Acife_2186 6ccd1c0c56f39d95f76f5869297dd21a 594 Pfam PF07549 SecD/SecF GG Motif 112 138 6.3E-8 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Acife_2186 6ccd1c0c56f39d95f76f5869297dd21a 594 Pfam PF02355 Protein export membrane protein 414 580 3.9E-23 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Acife_2186 6ccd1c0c56f39d95f76f5869297dd21a 594 SUPERFAMILY SSF82866 390 582 1.7E-41 T 12-10-2018 Acife_2186 6ccd1c0c56f39d95f76f5869297dd21a 594 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 593 48.848 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Acife_2186 6ccd1c0c56f39d95f76f5869297dd21a 594 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 120 579 2.4E-145 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Acife_2186 6ccd1c0c56f39d95f76f5869297dd21a 594 Gene3D G3DSA:1.20.1640.10 415 588 1.0E-7 T 12-10-2018 Acife_3224 7d3a7be65176acebf3f055dce75282a4 563 SUPERFAMILY SSF56672 76 412 3.06E-56 T 12-10-2018 Acife_3224 7d3a7be65176acebf3f055dce75282a4 563 Pfam PF08388 Group II intron, maturase-specific domain 348 424 5.1E-24 T 12-10-2018 IPR013597 Group II intron, maturase-specific Acife_3224 7d3a7be65176acebf3f055dce75282a4 563 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 324 3.0E-47 T 12-10-2018 IPR000477 Reverse transcriptase domain Acife_3224 7d3a7be65176acebf3f055dce75282a4 563 Gene3D G3DSA:3.30.70.270 202 328 2.2E-5 T 12-10-2018 Acife_3224 7d3a7be65176acebf3f055dce75282a4 563 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 62 411 1.4E-117 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase Acife_3224 7d3a7be65176acebf3f055dce75282a4 563 Pfam PF13655 N-terminal domain of reverse transcriptase 16 97 1.3E-32 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain Acife_3224 7d3a7be65176acebf3f055dce75282a4 563 SMART SM00507 488 545 7.4E-6 T 12-10-2018 IPR003615 HNH nuclease Acife_3224 7d3a7be65176acebf3f055dce75282a4 563 Pfam PF01844 HNH endonuclease 504 550 1.1E-8 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 Gene3D G3DSA:1.10.287.130 298 373 4.9E-15 T 12-10-2018 Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 SUPERFAMILY SSF55785 184 260 1.28E-5 T 12-10-2018 IPR035965 PAS domain superfamily Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 Pfam PF00512 His Kinase A (phospho-acceptor) domain 310 371 1.5E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 SMART SM00388 310 375 2.7E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 Gene3D G3DSA:3.30.565.10 392 527 3.6E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 418 524 1.6E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 2.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 2.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 2.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 2.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 SUPERFAMILY SSF47384 300 372 9.22E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 SMART SM00387 417 527 1.1E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_2860 d040362d3c99d7deb2a31156e8fda660 532 SUPERFAMILY SSF55874 369 529 7.6E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1027 c397724e84f7994ad379f3c3549b81c6 226 SMART SM00849 11 169 1.5E-7 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_1027 c397724e84f7994ad379f3c3549b81c6 226 Gene3D G3DSA:3.60.15.10 1 222 1.1E-35 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_1027 c397724e84f7994ad379f3c3549b81c6 226 SUPERFAMILY SSF56281 13 171 3.46E-24 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_2512 c91c07ae9a989f39e0e15b38b1f6b5e2 120 SMART SM00960 6 96 1.2E-23 T 12-10-2018 IPR004942 Roadblock/LAMTOR2 domain Acife_2512 c91c07ae9a989f39e0e15b38b1f6b5e2 120 SUPERFAMILY SSF103196 4 120 6.8E-29 T 12-10-2018 Acife_2512 c91c07ae9a989f39e0e15b38b1f6b5e2 120 Gene3D G3DSA:3.30.450.30 2 120 4.9E-29 T 12-10-2018 Acife_2512 c91c07ae9a989f39e0e15b38b1f6b5e2 120 Pfam PF03259 Roadblock/LC7 domain 15 96 1.0E-16 T 12-10-2018 IPR004942 Roadblock/LAMTOR2 domain Acife_2153 4847c6543421b2ccff92cd5d96f44e6b 581 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 408 556 6.8E-52 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Acife_2153 4847c6543421b2ccff92cd5d96f44e6b 581 Gene3D G3DSA:3.40.50.970 14 202 2.9E-72 T 12-10-2018 Acife_2153 4847c6543421b2ccff92cd5d96f44e6b 581 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 211 342 1.0E-43 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Acife_2153 4847c6543421b2ccff92cd5d96f44e6b 581 Gene3D G3DSA:3.40.50.970 377 580 2.5E-69 T 12-10-2018 Acife_2153 4847c6543421b2ccff92cd5d96f44e6b 581 SUPERFAMILY SSF52518 17 199 6.63E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_2153 4847c6543421b2ccff92cd5d96f44e6b 581 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 445 464 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Acife_2153 4847c6543421b2ccff92cd5d96f44e6b 581 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 20 580 4.6E-262 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Acife_2153 4847c6543421b2ccff92cd5d96f44e6b 581 Gene3D G3DSA:3.40.50.1220 205 374 1.1E-60 T 12-10-2018 Acife_2153 4847c6543421b2ccff92cd5d96f44e6b 581 SUPERFAMILY SSF52467 203 376 9.69E-66 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Acife_2153 4847c6543421b2ccff92cd5d96f44e6b 581 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 21 185 5.5E-58 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Acife_2153 4847c6543421b2ccff92cd5d96f44e6b 581 SUPERFAMILY SSF52518 386 579 2.5E-72 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 SMART SM00841 130 185 3.4E-30 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 SUPERFAMILY SSF50104 3 64 3.19E-17 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 Pfam PF09285 Elongation factor P, C-terminal 130 185 4.9E-24 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 Hamap MF_00141 Elongation factor P [efp]. 2 186 44.09 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 Gene3D G3DSA:2.40.50.140 65 128 3.8E-22 T 12-10-2018 Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 SMART SM01185 68 122 1.0E-22 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 8.3E-19 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 PIRSF PIRSF005901 1 186 2.8E-65 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 SUPERFAMILY SSF50249 66 127 6.85E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 Gene3D G3DSA:2.30.30.30 3 64 1.4E-21 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 TIGRFAM TIGR00038 efp: translation elongation factor P 4 185 5.4E-72 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 SUPERFAMILY SSF50249 130 185 7.71E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 Gene3D G3DSA:2.40.50.140 129 186 6.7E-23 T 12-10-2018 Acife_1361 a75441f773ccd8a9b9b534b2359b2253 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 2.7E-21 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like Acife_0056 82453d515c3b68b243cb2f1583d88e3b 236 Pfam PF04012 PspA/IM30 family 2 229 1.3E-29 T 12-10-2018 IPR007157 PspA/IM30 Acife_2924 173e0dd8f7684c910bbb33767d5c7178 242 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 234 3.1E-75 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Acife_2924 173e0dd8f7684c910bbb33767d5c7178 242 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 34.407 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Acife_2924 173e0dd8f7684c910bbb33767d5c7178 242 Gene3D G3DSA:3.20.20.70 1 241 6.9E-83 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2924 173e0dd8f7684c910bbb33767d5c7178 242 Pfam PF00977 Histidine biosynthesis protein 3 231 1.9E-74 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Acife_2924 173e0dd8f7684c910bbb33767d5c7178 242 SUPERFAMILY SSF51366 1 237 2.75E-72 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Acife_1314 6c74965cbaf26e8dffbfc02d2ece49a5 316 SUPERFAMILY SSF52096 5 312 4.38E-95 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Acife_1314 6c74965cbaf26e8dffbfc02d2ece49a5 316 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 145 3.9E-57 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_1314 6c74965cbaf26e8dffbfc02d2ece49a5 316 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 313 1.8E-141 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_1314 6c74965cbaf26e8dffbfc02d2ece49a5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 131 147 3.8E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_1314 6c74965cbaf26e8dffbfc02d2ece49a5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 166 179 3.8E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_1314 6c74965cbaf26e8dffbfc02d2ece49a5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 194 203 3.8E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_1314 6c74965cbaf26e8dffbfc02d2ece49a5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 85 96 3.8E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_1314 6c74965cbaf26e8dffbfc02d2ece49a5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 150 163 3.8E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_1314 6c74965cbaf26e8dffbfc02d2ece49a5 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 110 128 3.8E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_1314 6c74965cbaf26e8dffbfc02d2ece49a5 316 Gene3D G3DSA:3.90.226.10 4 313 2.3E-107 T 12-10-2018 Acife_1314 6c74965cbaf26e8dffbfc02d2ece49a5 316 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 313 48.059 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_2355 4b98b0990e602932999845f4c1fd2163 298 Gene3D G3DSA:3.90.25.10 162 285 1.7E-78 T 12-10-2018 Acife_2355 4b98b0990e602932999845f4c1fd2163 298 SUPERFAMILY SSF51735 1 295 9.76E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2355 4b98b0990e602932999845f4c1fd2163 298 Gene3D G3DSA:3.40.50.720 3 278 1.7E-78 T 12-10-2018 Acife_2355 4b98b0990e602932999845f4c1fd2163 298 Pfam PF16363 GDP-mannose 4,6 dehydratase 31 284 2.1E-51 T 12-10-2018 IPR016040 NAD(P)-binding domain Acife_2361 86eb9fe2e7a7e768f451cfcda2ab17b4 342 Pfam PF01548 Transposase 7 145 2.3E-11 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Acife_2361 86eb9fe2e7a7e768f451cfcda2ab17b4 342 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 9.5E-24 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Acife_2361 86eb9fe2e7a7e768f451cfcda2ab17b4 342 Gene3D G3DSA:1.10.340.30 119 232 9.7E-6 T 12-10-2018 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 Pfam PF08264 Anticodon-binding domain of tRNA 688 842 3.5E-27 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 SUPERFAMILY SSF50677 203 401 1.57E-53 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 13 843 9.0E-279 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 643 4.1E-199 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 SUPERFAMILY SSF47323 655 927 1.27E-71 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 Pfam PF06827 Zinc finger found in FPG and IleRS 898 925 2.5E-5 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 564 573 1.0E-33 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 1.0E-33 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.0E-33 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 236 259 1.0E-33 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 530 543 1.0E-33 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 928 20.721 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 SUPERFAMILY SSF52374 1 650 2.94E-137 T 12-10-2018 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 Gene3D G3DSA:1.10.730.20 643 929 4.9E-87 T 12-10-2018 Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 Gene3D G3DSA:3.40.50.620 24 632 4.9E-240 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2267 a347caf19093d7ad0f03e5306dd15e10 937 Gene3D G3DSA:3.90.740.10 194 406 4.9E-240 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Acife_0242 62b9cd1c1e9c14cb56bc704f130f3d93 849 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 384 571 5.2E-34 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Acife_0242 62b9cd1c1e9c14cb56bc704f130f3d93 849 Gene3D G3DSA:3.30.450.20 189 317 2.8E-15 T 12-10-2018 Acife_0242 62b9cd1c1e9c14cb56bc704f130f3d93 849 SUPERFAMILY SSF55785 189 310 4.19E-14 T 12-10-2018 IPR035965 PAS domain superfamily Acife_0242 62b9cd1c1e9c14cb56bc704f130f3d93 849 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 204 317 7.2E-12 T 12-10-2018 IPR000014 PAS domain Acife_0242 62b9cd1c1e9c14cb56bc704f130f3d93 849 SMART SM00091 200 267 1.5E-7 T 12-10-2018 IPR000014 PAS domain Acife_0242 62b9cd1c1e9c14cb56bc704f130f3d93 849 SMART SM00331 355 571 6.0E-26 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Acife_0242 62b9cd1c1e9c14cb56bc704f130f3d93 849 SUPERFAMILY SSF81606 369 571 1.18E-9 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Acife_0242 62b9cd1c1e9c14cb56bc704f130f3d93 849 Gene3D G3DSA:3.60.40.10 325 572 1.3E-45 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Acife_0242 62b9cd1c1e9c14cb56bc704f130f3d93 849 Pfam PF08448 PAS fold 208 313 4.1E-11 T 12-10-2018 IPR013656 PAS fold-4 Acife_0274 4d785b933ee77c948795c51972910d27 353 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 138 259 6.6E-20 T 12-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain Acife_0274 4d785b933ee77c948795c51972910d27 353 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 24 265 3.9E-35 T 12-10-2018 IPR017592 Pilus assembly, Flp-type CpaB Acife_0274 4d785b933ee77c948795c51972910d27 353 SMART SM00858 68 132 0.0095 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Acife_2430 2a61022df537d154fef3b34fe5ffc0b1 503 SMART SM00382 211 393 8.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2430 2a61022df537d154fef3b34fe5ffc0b1 503 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 394 4.3E-96 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain Acife_2430 2a61022df537d154fef3b34fe5ffc0b1 503 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.4E-43 T 12-10-2018 Acife_2430 2a61022df537d154fef3b34fe5ffc0b1 503 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 495 4.7E-192 T 12-10-2018 IPR004482 Mg chelatase-related protein Acife_2430 2a61022df537d154fef3b34fe5ffc0b1 503 Gene3D G3DSA:3.40.50.300 192 501 1.6E-57 T 12-10-2018 Acife_2430 2a61022df537d154fef3b34fe5ffc0b1 503 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 403 495 2.1E-30 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Acife_2430 2a61022df537d154fef3b34fe5ffc0b1 503 SUPERFAMILY SSF54211 10 169 6.83E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2430 2a61022df537d154fef3b34fe5ffc0b1 503 SUPERFAMILY SSF52540 188 497 1.26E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2430 2a61022df537d154fef3b34fe5ffc0b1 503 Gene3D G3DSA:3.30.230.10 19 169 7.4E-9 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Acife_2043 d0292e6435ad4a73cd7dc95ddd8fbdf2 449 Gene3D G3DSA:1.10.3090.10 177 440 6.9E-51 T 12-10-2018 Acife_2043 d0292e6435ad4a73cd7dc95ddd8fbdf2 449 SUPERFAMILY SSF81891 180 439 1.24E-28 T 12-10-2018 Acife_2043 d0292e6435ad4a73cd7dc95ddd8fbdf2 449 Pfam PF01743 Poly A polymerase head domain 53 181 1.0E-26 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Acife_2043 d0292e6435ad4a73cd7dc95ddd8fbdf2 449 SUPERFAMILY SSF81301 27 178 2.29E-32 T 12-10-2018 Acife_2043 d0292e6435ad4a73cd7dc95ddd8fbdf2 449 Gene3D G3DSA:3.30.460.10 20 176 2.7E-41 T 12-10-2018 Acife_2941 efdac9dd0ee41a410028ab26ca37f68b 168 SUPERFAMILY SSF53271 7 153 2.75E-32 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Acife_2941 efdac9dd0ee41a410028ab26ca37f68b 168 Pfam PF00156 Phosphoribosyl transferase domain 23 136 3.1E-15 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Acife_2941 efdac9dd0ee41a410028ab26ca37f68b 168 Gene3D G3DSA:3.40.50.2020 2 157 2.0E-38 T 12-10-2018 Acife_2313 71a8ff00626a8c3822f4832693f0ea28 507 Pfam PF00665 Integrase core domain 134 262 1.4E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_2313 71a8ff00626a8c3822f4832693f0ea28 507 SUPERFAMILY SSF53098 134 301 1.29E-12 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_2759 40782190c6a2b898793cfc72d88c8ffd 230 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 229 1.0E-46 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Acife_2759 40782190c6a2b898793cfc72d88c8ffd 230 SUPERFAMILY SSF53335 50 227 1.57E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2759 40782190c6a2b898793cfc72d88c8ffd 230 Pfam PF02390 Putative methyltransferase 55 224 8.3E-47 T 12-10-2018 Acife_2759 40782190c6a2b898793cfc72d88c8ffd 230 Gene3D G3DSA:3.40.50.150 24 229 3.3E-55 T 12-10-2018 Acife_2759 40782190c6a2b898793cfc72d88c8ffd 230 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 19 229 27.582 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Acife_2442 b7a886989dd49ff52274ce44c3cb2485 214 Pfam PF13098 Thioredoxin-like domain 72 209 3.9E-13 T 12-10-2018 IPR012336 Thioredoxin-like fold Acife_2442 b7a886989dd49ff52274ce44c3cb2485 214 Gene3D G3DSA:3.40.30.10 68 213 2.6E-28 T 12-10-2018 Acife_2442 b7a886989dd49ff52274ce44c3cb2485 214 SUPERFAMILY SSF52833 65 211 3.85E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1023 0008b8800f2f3893306637b0ea523943 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 31.907 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Acife_1023 0008b8800f2f3893306637b0ea523943 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 157 3.5E-26 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Acife_1023 0008b8800f2f3893306637b0ea523943 158 Gene3D G3DSA:3.10.50.30 80 158 5.1E-28 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Acife_1023 0008b8800f2f3893306637b0ea523943 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Acife_1023 0008b8800f2f3893306637b0ea523943 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Acife_1023 0008b8800f2f3893306637b0ea523943 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 9.2E-31 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Acife_1023 0008b8800f2f3893306637b0ea523943 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 6 155 2.0E-55 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Acife_1023 0008b8800f2f3893306637b0ea523943 158 Gene3D G3DSA:1.10.287.180 2 76 6.3E-30 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Acife_1023 0008b8800f2f3893306637b0ea523943 158 SUPERFAMILY SSF46557 4 79 8.5E-28 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Acife_1023 0008b8800f2f3893306637b0ea523943 158 PIRSF PIRSF006092 1 158 1.6E-51 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Acife_1023 0008b8800f2f3893306637b0ea523943 158 SUPERFAMILY SSF54534 84 157 1.7E-21 T 12-10-2018 Acife_2427 6f340681078b1e8ca36d8aa403a74604 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 2.7E-8 T 12-10-2018 Acife_2427 6f340681078b1e8ca36d8aa403a74604 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.7E-8 T 12-10-2018 Acife_2427 6f340681078b1e8ca36d8aa403a74604 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 2.7E-8 T 12-10-2018 Acife_2427 6f340681078b1e8ca36d8aa403a74604 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 2.7E-8 T 12-10-2018 Acife_2427 6f340681078b1e8ca36d8aa403a74604 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 388 5.1E-86 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Acife_2427 6f340681078b1e8ca36d8aa403a74604 409 Pfam PF01494 FAD binding domain 153 339 1.7E-10 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 Acife_2427 6f340681078b1e8ca36d8aa403a74604 409 Gene3D G3DSA:3.50.50.60 7 337 2.3E-65 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2427 6f340681078b1e8ca36d8aa403a74604 409 SUPERFAMILY SSF51905 7 380 6.88E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2427 6f340681078b1e8ca36d8aa403a74604 409 Gene3D G3DSA:3.30.9.50 78 268 2.3E-65 T 12-10-2018 Acife_2427 6f340681078b1e8ca36d8aa403a74604 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 293 306 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Acife_3179 26b406f7ab2c4614f7e52657d17cbcdb 264 Pfam PF01925 Sulfite exporter TauE/SafE 8 258 2.9E-48 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Acife_0520 52f0351d06e6c5e67d97f7a78635cb97 1179 Gene3D G3DSA:3.40.50.300 913 1165 3.5E-14 T 12-10-2018 Acife_0520 52f0351d06e6c5e67d97f7a78635cb97 1179 Gene3D G3DSA:3.40.50.300 1 425 2.2E-14 T 12-10-2018 Acife_0520 52f0351d06e6c5e67d97f7a78635cb97 1179 Pfam PF13514 AAA domain 2 213 4.6E-66 T 12-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain Acife_0520 52f0351d06e6c5e67d97f7a78635cb97 1179 SUPERFAMILY SSF52540 2 1164 7.78E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0520 52f0351d06e6c5e67d97f7a78635cb97 1179 SUPERFAMILY SSF52540 2 357 7.29E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 Gene3D G3DSA:3.30.70.260 258 407 3.0E-57 T 12-10-2018 Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 SUPERFAMILY SSF55021 253 329 1.86E-17 T 12-10-2018 Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 Gene3D G3DSA:3.40.1160.10 6 257 1.1E-90 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 Pfam PF13840 ACT domain 343 402 2.7E-16 T 12-10-2018 IPR027795 CASTOR, ACT domain Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 SUPERFAMILY SSF53633 9 248 5.5E-75 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 PIRSF PIRSF000726 6 65 1.2E-22 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 PIRSF PIRSF000726 58 412 2.2E-143 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 Pfam PF01842 ACT domain 271 323 2.0E-8 T 12-10-2018 IPR002912 ACT domain Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 Gene3D G3DSA:3.30.70.260 265 342 3.0E-57 T 12-10-2018 Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 Pfam PF00696 Amino acid kinase family 8 234 4.4E-52 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 SUPERFAMILY SSF55021 333 408 1.34E-24 T 12-10-2018 Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 ProSitePatterns PS00324 Aspartokinase signature. 10 18 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 407 7.2E-137 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Acife_2635 dcc7b5dc87e0de25489d5a7a6f6c6d51 413 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 67 406 8.6E-122 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Acife_1512 370fbbcd340c07563fe5e9edc8c9ac64 363 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 13 352 72.563 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Acife_1512 370fbbcd340c07563fe5e9edc8c9ac64 363 PIRSF PIRSF006004 8 361 5.8E-137 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Acife_1512 370fbbcd340c07563fe5e9edc8c9ac64 363 Gene3D G3DSA:3.20.20.70 75 337 4.2E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1512 370fbbcd340c07563fe5e9edc8c9ac64 363 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 10 352 6.2E-126 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Acife_1512 370fbbcd340c07563fe5e9edc8c9ac64 363 Pfam PF04055 Radical SAM superfamily 117 277 3.1E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_1512 370fbbcd340c07563fe5e9edc8c9ac64 363 Gene3D G3DSA:1.10.150.530 14 72 4.0E-19 T 12-10-2018 Acife_1512 370fbbcd340c07563fe5e9edc8c9ac64 363 SUPERFAMILY SSF102114 110 328 1.57E-17 T 12-10-2018 Acife_1653 1a686b5871998fb00da12723dbdf5efc 462 TIGRFAM TIGR02662 dinitro_DRAG: ADP-ribosyl-[dinitrogen reductase] hydrolase 5 288 2.0E-148 T 12-10-2018 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase Acife_1653 1a686b5871998fb00da12723dbdf5efc 462 SUPERFAMILY SSF52833 306 417 1.06E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1653 1a686b5871998fb00da12723dbdf5efc 462 Gene3D G3DSA:1.10.4080.10 2 296 1.5E-93 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Acife_1653 1a686b5871998fb00da12723dbdf5efc 462 Pfam PF03747 ADP-ribosylglycohydrolase 11 264 5.7E-51 T 12-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Acife_1653 1a686b5871998fb00da12723dbdf5efc 462 Pfam PF03960 ArsC family 374 413 7.5E-5 T 12-10-2018 IPR006660 Arsenate reductase-like Acife_1653 1a686b5871998fb00da12723dbdf5efc 462 SUPERFAMILY SSF101478 3 289 1.44E-69 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Acife_1653 1a686b5871998fb00da12723dbdf5efc 462 Gene3D G3DSA:3.40.30.10 304 416 1.1E-16 T 12-10-2018 Acife_1653 1a686b5871998fb00da12723dbdf5efc 462 TIGRFAM TIGR01616 nitro_assoc: nitrogenase-associated protein 306 416 2.8E-49 T 12-10-2018 IPR006503 Nitrogenase-associated protein Acife_0383 414b9a45a435b5eb56fc6a0ca74fc4f7 155 SUPERFAMILY SSF54427 4 155 9.79E-72 T 12-10-2018 IPR032710 NTF2-like domain superfamily Acife_0383 414b9a45a435b5eb56fc6a0ca74fc4f7 155 Gene3D G3DSA:3.10.450.50 11 155 5.7E-71 T 12-10-2018 Acife_0383 414b9a45a435b5eb56fc6a0ca74fc4f7 155 Pfam PF07080 Protein of unknown function (DUF1348) 8 137 6.5E-61 T 12-10-2018 IPR009783 Protein of unknown function DUF1348 Acife_3016 39037c2241128d593ff0801241336cb4 245 Pfam PF00106 short chain dehydrogenase 3 194 2.1E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3016 39037c2241128d593ff0801241336cb4 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Acife_3016 39037c2241128d593ff0801241336cb4 245 SUPERFAMILY SSF51735 2 243 5.16E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_3016 39037c2241128d593ff0801241336cb4 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.9E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3016 39037c2241128d593ff0801241336cb4 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.9E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3016 39037c2241128d593ff0801241336cb4 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.9E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3016 39037c2241128d593ff0801241336cb4 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.9E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3016 39037c2241128d593ff0801241336cb4 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.9E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3016 39037c2241128d593ff0801241336cb4 245 Gene3D G3DSA:3.40.50.720 1 244 1.2E-48 T 12-10-2018 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 Gene3D G3DSA:1.10.10.60 492 545 6.6E-8 T 12-10-2018 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 Pfam PF01590 GAF domain 28 167 1.2E-12 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 Gene3D G3DSA:3.40.50.300 185 371 7.7E-70 T 12-10-2018 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 Gene3D G3DSA:3.30.450.40 7 180 1.0E-44 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_1654 540ff67f0c885b865d44b51a9b286132 545 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 225 238 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 SUPERFAMILY SSF55781 10 167 2.84E-20 T 12-10-2018 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 Gene3D G3DSA:1.10.8.60 372 448 1.9E-23 T 12-10-2018 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 Pfam PF00158 Sigma-54 interaction domain 201 367 4.5E-73 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 Pfam PF02954 Bacterial regulatory protein, Fis family 501 538 1.6E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 SMART SM00382 221 364 6.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1654 540ff67f0c885b865d44b51a9b286132 545 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 504 521 2.3E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 521 541 2.3E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 413 422 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Acife_1654 540ff67f0c885b865d44b51a9b286132 545 SMART SM00065 28 178 8.4E-21 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 287 302 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 TIGRFAM TIGR01817 nifA: Nif-specific regulatory protein 12 545 2.1E-212 T 12-10-2018 IPR010113 Nif-specific regulatory protein GO:0003700|GO:0006355|GO:0009399 Acife_1654 540ff67f0c885b865d44b51a9b286132 545 SUPERFAMILY SSF52540 200 441 1.69E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0563 bb0b6151455709cf1d9c2eb5dbb7850f 313 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 299 48.254 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Acife_0563 bb0b6151455709cf1d9c2eb5dbb7850f 313 Pfam PF00589 Phage integrase family 112 285 4.6E-39 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_0563 bb0b6151455709cf1d9c2eb5dbb7850f 313 SUPERFAMILY SSF56349 106 297 8.54E-49 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_0563 bb0b6151455709cf1d9c2eb5dbb7850f 313 Gene3D G3DSA:1.10.150.130 4 98 1.6E-15 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_0563 bb0b6151455709cf1d9c2eb5dbb7850f 313 Gene3D G3DSA:1.10.443.10 113 293 4.4E-53 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_0563 bb0b6151455709cf1d9c2eb5dbb7850f 313 SUPERFAMILY SSF47823 6 97 3.92E-12 T 12-10-2018 Acife_0563 bb0b6151455709cf1d9c2eb5dbb7850f 313 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 86 2.9E-15 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Acife_3240 44f0219af1dcbf97c222190e1e25c7ba 269 Pfam PF01061 ABC-2 type transporter 26 229 2.1E-14 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Acife_2027 03d09a070ed2f49f69ea7848378030ef 291 SUPERFAMILY SSF55174 5 96 4.12E-17 T 12-10-2018 Acife_2027 03d09a070ed2f49f69ea7848378030ef 291 SUPERFAMILY SSF55120 67 237 7.19E-40 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2027 03d09a070ed2f49f69ea7848378030ef 291 SMART SM00363 3 66 5.6E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2027 03d09a070ed2f49f69ea7848378030ef 291 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 230 2.2E-52 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Acife_2027 03d09a070ed2f49f69ea7848378030ef 291 Gene3D G3DSA:3.30.70.1560 129 219 1.6E-48 T 12-10-2018 Acife_2027 03d09a070ed2f49f69ea7848378030ef 291 Gene3D G3DSA:3.30.70.580 70 225 1.6E-48 T 12-10-2018 Acife_2027 03d09a070ed2f49f69ea7848378030ef 291 Pfam PF01479 S4 domain 4 48 6.2E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2027 03d09a070ed2f49f69ea7848378030ef 291 Pfam PF00849 RNA pseudouridylate synthase 68 200 2.8E-13 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2027 03d09a070ed2f49f69ea7848378030ef 291 Gene3D G3DSA:3.10.290.10 1 57 1.3E-19 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Acife_2027 03d09a070ed2f49f69ea7848378030ef 291 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Acife_2728 84dd959c921e52fc8898c85177e08157 190 SMART SM00671 124 159 1.1E-10 T 12-10-2018 IPR006597 Sel1-like repeat Acife_2728 84dd959c921e52fc8898c85177e08157 190 SMART SM00671 52 87 0.0031 T 12-10-2018 IPR006597 Sel1-like repeat Acife_2728 84dd959c921e52fc8898c85177e08157 190 SMART SM00671 88 123 1.9E-8 T 12-10-2018 IPR006597 Sel1-like repeat Acife_2728 84dd959c921e52fc8898c85177e08157 190 SUPERFAMILY SSF81901 58 167 1.83E-31 T 12-10-2018 Acife_2728 84dd959c921e52fc8898c85177e08157 190 Gene3D G3DSA:1.25.40.10 45 184 1.1E-37 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_2728 84dd959c921e52fc8898c85177e08157 190 Pfam PF08238 Sel1 repeat 88 122 1.1E-8 T 12-10-2018 IPR006597 Sel1-like repeat Acife_2728 84dd959c921e52fc8898c85177e08157 190 Pfam PF08238 Sel1 repeat 124 159 7.7E-9 T 12-10-2018 IPR006597 Sel1-like repeat Acife_2728 84dd959c921e52fc8898c85177e08157 190 Pfam PF08238 Sel1 repeat 65 87 4.5E-4 T 12-10-2018 IPR006597 Sel1-like repeat Acife_1210 d6cbcdc6264901ca778a6098255a75f9 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 8.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Acife_1210 d6cbcdc6264901ca778a6098255a75f9 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 8.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Acife_1210 d6cbcdc6264901ca778a6098255a75f9 205 Gene3D G3DSA:1.10.357.10 4 204 4.4E-45 T 12-10-2018 Acife_1210 d6cbcdc6264901ca778a6098255a75f9 205 SUPERFAMILY SSF46689 6 80 4.16E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_1210 d6cbcdc6264901ca778a6098255a75f9 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 2.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Acife_1210 d6cbcdc6264901ca778a6098255a75f9 205 Pfam PF16925 Bacterial transcriptional repressor C-terminal 88 186 9.8E-12 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Acife_1210 d6cbcdc6264901ca778a6098255a75f9 205 SUPERFAMILY SSF48498 86 199 2.36E-21 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Acife_1210 d6cbcdc6264901ca778a6098255a75f9 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Acife_1253 f952dd6e0cae7ecd25b71b67686c6279 637 Gene3D G3DSA:3.30.1390.30 81 156 2.6E-39 T 12-10-2018 Acife_1253 f952dd6e0cae7ecd25b71b67686c6279 637 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 16 598 2.3E-185 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Acife_1253 f952dd6e0cae7ecd25b71b67686c6279 637 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 592 9.6E-68 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Acife_1253 f952dd6e0cae7ecd25b71b67686c6279 637 Gene3D G3DSA:3.90.1310.10 60 240 2.6E-39 T 12-10-2018 Acife_1253 f952dd6e0cae7ecd25b71b67686c6279 637 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 230 6.8E-40 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Acife_1253 f952dd6e0cae7ecd25b71b67686c6279 637 Gene3D G3DSA:3.40.710.10 245 618 2.7E-90 T 12-10-2018 Acife_1253 f952dd6e0cae7ecd25b71b67686c6279 637 SUPERFAMILY SSF56601 249 599 7.77E-92 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Acife_1253 f952dd6e0cae7ecd25b71b67686c6279 637 SUPERFAMILY SSF56519 52 243 8.76E-45 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Acife_1157 a17382fa8de6c30e8cca580e99934f1b 74 SUPERFAMILY SSF46689 2 65 9.5E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_1157 a17382fa8de6c30e8cca580e99934f1b 74 Gene3D G3DSA:1.10.10.10 6 73 9.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1157 a17382fa8de6c30e8cca580e99934f1b 74 Pfam PF04255 Protein of unknown function (DUF433) 7 62 7.2E-27 T 12-10-2018 IPR007367 Protein of unknown function DUF433 Acife_1173 79e2f3da99c8b68206bc6849284eb234 301 SUPERFAMILY SSF51735 6 300 3.97E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1173 79e2f3da99c8b68206bc6849284eb234 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 219 1.5E-30 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Acife_1173 79e2f3da99c8b68206bc6849284eb234 301 Gene3D G3DSA:3.40.50.720 4 301 2.5E-45 T 12-10-2018 Acife_2286 a1e26bb3e828a53277e2792bf127b4b5 189 Gene3D G3DSA:3.40.50.2020 9 185 7.3E-47 T 12-10-2018 Acife_2286 a1e26bb3e828a53277e2792bf127b4b5 189 SUPERFAMILY SSF53271 30 183 1.79E-26 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Acife_2286 a1e26bb3e828a53277e2792bf127b4b5 189 Pfam PF00156 Phosphoribosyl transferase domain 47 169 1.9E-14 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Acife_0561 2aa7326835559a23ef643378144d6498 442 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 108 5.3E-7 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_0561 2aa7326835559a23ef643378144d6498 442 SUPERFAMILY SSF52540 5 440 1.99E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0561 2aa7326835559a23ef643378144d6498 442 SMART SM01086 334 430 2.4E-18 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Acife_0561 2aa7326835559a23ef643378144d6498 442 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 334 404 1.0E-5 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Acife_0561 2aa7326835559a23ef643378144d6498 442 Gene3D G3DSA:1.10.8.60 334 439 1.7E-37 T 12-10-2018 Acife_0561 2aa7326835559a23ef643378144d6498 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 328 1.6E-39 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_0561 2aa7326835559a23ef643378144d6498 442 SMART SM00382 51 331 8.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0561 2aa7326835559a23ef643378144d6498 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 6 442 3.7E-197 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Acife_0561 2aa7326835559a23ef643378144d6498 442 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 3 442 42.274 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Acife_0058 fd208293e2f2dacb4f111c49deb4c00a 187 Pfam PF13511 Domain of unknown function (DUF4124) 35 85 1.2E-11 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 15 31 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 SUPERFAMILY SSF110921 399 502 6.8E-26 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 Pfam PF00682 HMGL-like 8 276 3.4E-99 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 SUPERFAMILY SSF51569 5 294 9.34E-101 T 12-10-2018 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 8 500 8.3E-218 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 Gene3D G3DSA:1.10.238.260 283 397 3.7E-35 T 12-10-2018 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 202 215 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 Pfam PF08502 LeuA allosteric (dimerisation) domain 372 503 9.9E-38 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 Gene3D G3DSA:3.30.160.270 398 504 1.5E-12 T 12-10-2018 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 SMART SM00917 372 503 7.1E-42 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 Gene3D G3DSA:3.20.20.70 4 279 1.5E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2526 04bef63a2e1a423c39dab54288940bce 513 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 5 512 43.28 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_3212 590abe2de7fd3b7ee02565b8415038a6 499 Pfam PF01565 FAD binding domain 56 194 1.3E-36 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Acife_3212 590abe2de7fd3b7ee02565b8415038a6 499 SUPERFAMILY SSF55103 204 473 1.13E-68 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Acife_3212 590abe2de7fd3b7ee02565b8415038a6 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 231 470 7.6E-67 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Acife_3212 590abe2de7fd3b7ee02565b8415038a6 499 Gene3D G3DSA:3.30.465.40 18 248 3.8E-62 T 12-10-2018 Acife_3212 590abe2de7fd3b7ee02565b8415038a6 499 Gene3D G3DSA:3.30.70.2740 350 431 1.9E-8 T 12-10-2018 Acife_3212 590abe2de7fd3b7ee02565b8415038a6 499 Gene3D G3DSA:1.10.45.10 432 472 1.3E-7 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Acife_3212 590abe2de7fd3b7ee02565b8415038a6 499 SUPERFAMILY SSF56176 19 231 6.54E-67 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Acife_0293 3c8db05512c4716fbe89133340a9b9d1 114 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 112 1.3E-50 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0293 3c8db05512c4716fbe89133340a9b9d1 114 Pfam PF01245 Ribosomal protein L19 2 112 7.4E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0293 3c8db05512c4716fbe89133340a9b9d1 114 SUPERFAMILY SSF50104 1 113 2.71E-48 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Acife_0293 3c8db05512c4716fbe89133340a9b9d1 114 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 30.664 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0293 3c8db05512c4716fbe89133340a9b9d1 114 Gene3D G3DSA:2.30.30.790 3 113 3.6E-15 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0293 3c8db05512c4716fbe89133340a9b9d1 114 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_0293 3c8db05512c4716fbe89133340a9b9d1 114 PIRSF PIRSF002191 1 114 3.7E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0293 3c8db05512c4716fbe89133340a9b9d1 114 PRINTS PR00061 Ribosomal protein L19 signature 87 112 1.9E-40 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0293 3c8db05512c4716fbe89133340a9b9d1 114 PRINTS PR00061 Ribosomal protein L19 signature 3 32 1.9E-40 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0293 3c8db05512c4716fbe89133340a9b9d1 114 PRINTS PR00061 Ribosomal protein L19 signature 33 62 1.9E-40 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_1082 2d50c703796c5a7e241d97585374f45b 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.0E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_1082 2d50c703796c5a7e241d97585374f45b 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 169 189 1.0E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_1082 2d50c703796c5a7e241d97585374f45b 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 167 1.0E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_1082 2d50c703796c5a7e241d97585374f45b 248 Pfam PF13419 Haloacid dehalogenase-like hydrolase 77 208 3.6E-23 T 12-10-2018 Acife_1082 2d50c703796c5a7e241d97585374f45b 248 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 202 2.6E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_1082 2d50c703796c5a7e241d97585374f45b 248 Gene3D G3DSA:1.20.120.710 16 108 9.6E-38 T 12-10-2018 Acife_1082 2d50c703796c5a7e241d97585374f45b 248 Gene3D G3DSA:3.40.50.1000 4 228 9.6E-38 T 12-10-2018 IPR023214 HAD superfamily Acife_1082 2d50c703796c5a7e241d97585374f45b 248 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 142 208 1.7E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_1082 2d50c703796c5a7e241d97585374f45b 248 SUPERFAMILY SSF56784 3 235 1.16E-35 T 12-10-2018 IPR036412 HAD-like superfamily Acife_3131 7c805dfd4abf7d5eb30c28633354d6d4 393 Gene3D G3DSA:3.30.70.100 295 393 4.3E-9 T 12-10-2018 Acife_3131 7c805dfd4abf7d5eb30c28633354d6d4 393 Pfam PF07876 Stress responsive A/B Barrel Domain 309 388 5.6E-8 T 12-10-2018 IPR013097 Stress responsive alpha-beta barrel Acife_3131 7c805dfd4abf7d5eb30c28633354d6d4 393 SUPERFAMILY SSF54909 307 389 1.3E-7 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Acife_3131 7c805dfd4abf7d5eb30c28633354d6d4 393 SUPERFAMILY SSF51569 2 282 7.03E-60 T 12-10-2018 Acife_3131 7c805dfd4abf7d5eb30c28633354d6d4 393 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 1.4E-64 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Acife_3131 7c805dfd4abf7d5eb30c28633354d6d4 393 Gene3D G3DSA:3.20.20.70 1 288 1.6E-69 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_3098 b9ccec6451494f412ba40ac168530e14 420 SUPERFAMILY SSF81324 155 287 2.75E-20 T 12-10-2018 Acife_3098 b9ccec6451494f412ba40ac168530e14 420 Pfam PF07885 Ion channel 171 243 1.0E-13 T 12-10-2018 IPR013099 Potassium channel domain Acife_3098 b9ccec6451494f412ba40ac168530e14 420 Pfam PF02254 TrkA-N domain 269 382 6.2E-13 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Acife_3098 b9ccec6451494f412ba40ac168530e14 420 Gene3D G3DSA:3.40.50.720 264 410 7.7E-27 T 12-10-2018 Acife_3098 b9ccec6451494f412ba40ac168530e14 420 Gene3D G3DSA:1.10.287.70 156 263 7.6E-17 T 12-10-2018 Acife_3098 b9ccec6451494f412ba40ac168530e14 420 SUPERFAMILY SSF51735 266 397 2.56E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0538 bfb499b2ed83db68dbefa7aaf88682aa 125 Pfam PF13488 Glycine zipper 36 76 6.9E-9 T 12-10-2018 IPR039567 Glycine zipper domain Acife_2338 d5e5994e96949ab276e0321154f3aa5c 391 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 184 389 3.9E-20 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 Acife_2338 d5e5994e96949ab276e0321154f3aa5c 391 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 6.6E-16 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Acife_2338 d5e5994e96949ab276e0321154f3aa5c 391 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 34 59 6.6E-16 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Acife_2338 d5e5994e96949ab276e0321154f3aa5c 391 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 84 104 6.6E-16 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Acife_2338 d5e5994e96949ab276e0321154f3aa5c 391 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 147 173 6.6E-16 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Acife_2338 d5e5994e96949ab276e0321154f3aa5c 391 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 184 206 6.6E-16 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Acife_2338 d5e5994e96949ab276e0321154f3aa5c 391 Gene3D G3DSA:2.102.10.10 47 167 1.5E-55 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_2338 d5e5994e96949ab276e0321154f3aa5c 391 Gene3D G3DSA:3.90.380.10 28 383 1.5E-55 T 12-10-2018 Acife_2338 d5e5994e96949ab276e0321154f3aa5c 391 SUPERFAMILY SSF50022 23 161 5.5E-38 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_2338 d5e5994e96949ab276e0321154f3aa5c 391 Pfam PF00355 Rieske [2Fe-2S] domain 49 137 9.9E-21 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Acife_2338 d5e5994e96949ab276e0321154f3aa5c 391 SUPERFAMILY SSF55961 164 389 5.42E-27 T 12-10-2018 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Gene3D G3DSA:1.10.132.30 631 780 1.3E-64 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Gene3D G3DSA:1.10.40.90 377 419 3.8E-23 T 12-10-2018 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 22 1357 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Pfam PF04983 RNA polymerase Rpb1, domain 3 492 634 7.2E-30 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Pfam PF00623 RNA polymerase Rpb1, domain 2 347 488 1.6E-34 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Gene3D G3DSA:1.10.274.100 556 630 3.7E-14 T 12-10-2018 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Pfam PF05000 RNA polymerase Rpb1, domain 4 663 753 3.1E-19 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 SMART SM00663 238 517 2.3E-184 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Gene3D G3DSA:1.10.150.390 1306 1364 3.2E-28 T 12-10-2018 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Gene3D G3DSA:3.90.105.10 820 874 4.1E-6 T 12-10-2018 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Pfam PF04997 RNA polymerase Rpb1, domain 1 18 345 1.2E-87 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Gene3D G3DSA:2.40.50.100 938 1013 1.6E-24 T 12-10-2018 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Gene3D G3DSA:2.40.50.100 1142 1205 1.2E-64 T 12-10-2018 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 SUPERFAMILY SSF64484 19 1354 0.0 T 12-10-2018 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Gene3D G3DSA:2.40.50.100 1014 1117 2.1E-26 T 12-10-2018 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Gene3D G3DSA:1.10.1790.20 1126 1304 1.2E-64 T 12-10-2018 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Gene3D G3DSA:1.10.274.100 493 555 1.1E-21 T 12-10-2018 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 13 1374 18.993 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2716 bc788f28a6bfba1e430ea02714952b90 1387 Pfam PF04998 RNA polymerase Rpb1, domain 5 756 1306 2.5E-73 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_1500 a819469dd99df68a1e804c6453088e58 81 Pfam PF01381 Helix-turn-helix 15 67 1.1E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_1500 a819469dd99df68a1e804c6453088e58 81 Gene3D G3DSA:1.10.260.40 1 80 1.4E-15 T 12-10-2018 Acife_1500 a819469dd99df68a1e804c6453088e58 81 SUPERFAMILY SSF47413 9 75 1.64E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_1500 a819469dd99df68a1e804c6453088e58 81 SMART SM00530 14 69 1.1E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 SUPERFAMILY SSF56059 106 317 2.3E-54 T 12-10-2018 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 SUPERFAMILY SSF51246 323 417 3.71E-28 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 Gene3D G3DSA:3.30.470.20 186 323 7.8E-48 T 12-10-2018 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 105 290 3.3E-64 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 4 416 5.3E-147 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 325 415 6.9E-27 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 4 104 4.3E-31 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 3 417 39.456 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 Gene3D G3DSA:3.40.50.20 4 97 6.0E-34 T 12-10-2018 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 Gene3D G3DSA:3.30.1490.20 123 185 3.0E-19 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 SMART SM01209 105 290 5.5E-112 T 12-10-2018 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 SUPERFAMILY SSF52440 3 105 1.87E-32 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 SMART SM01210 324 417 4.3E-45 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 284 291 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_1071 4cc75b4aeb36389d9182884f881a055d 420 Gene3D G3DSA:3.90.600.10 324 420 5.8E-31 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_0093 83ec87b5b3676c060349d4506a6c145f 118 Gene3D G3DSA:3.30.460.10 3 116 1.0E-37 T 12-10-2018 Acife_0093 83ec87b5b3676c060349d4506a6c145f 118 SUPERFAMILY SSF81301 5 111 3.27E-38 T 12-10-2018 Acife_0093 83ec87b5b3676c060349d4506a6c145f 118 Pfam PF02410 Ribosomal silencing factor during starvation 12 105 1.2E-27 T 12-10-2018 Acife_0093 83ec87b5b3676c060349d4506a6c145f 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 105 9.8E-37 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Acife_0093 83ec87b5b3676c060349d4506a6c145f 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 106 25.24 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Acife_2777 8d1c018d873b8c1ec23e9395c135fed1 201 SMART SM00479 12 196 3.9E-29 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Acife_2777 8d1c018d873b8c1ec23e9395c135fed1 201 Gene3D G3DSA:3.30.420.10 3 199 3.5E-50 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_2777 8d1c018d873b8c1ec23e9395c135fed1 201 TIGRFAM TIGR01298 RNaseT: ribonuclease T 5 195 2.8E-84 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Acife_2777 8d1c018d873b8c1ec23e9395c135fed1 201 SUPERFAMILY SSF53098 5 194 8.49E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_2777 8d1c018d873b8c1ec23e9395c135fed1 201 Hamap MF_00157 Ribonuclease T [rnt]. 1 201 87.511 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Acife_2777 8d1c018d873b8c1ec23e9395c135fed1 201 Pfam PF00929 Exonuclease 14 187 1.9E-28 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Acife_0092 59c5d5cf729b6a0cc0e79fe366fde83a 157 Gene3D G3DSA:3.40.1280.10 1 154 7.4E-41 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Acife_0092 59c5d5cf729b6a0cc0e79fe366fde83a 157 Pfam PF02590 Predicted SPOUT methyltransferase 1 152 3.2E-39 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Acife_0092 59c5d5cf729b6a0cc0e79fe366fde83a 157 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 153 23.861 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Acife_0092 59c5d5cf729b6a0cc0e79fe366fde83a 157 PIRSF PIRSF004505 1 153 3.9E-34 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Acife_0092 59c5d5cf729b6a0cc0e79fe366fde83a 157 SUPERFAMILY SSF75217 1 152 9.42E-41 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Acife_0224 133eea724e2a97c8f3ab34658766be32 389 Gene3D G3DSA:3.40.710.10 37 281 1.3E-60 T 12-10-2018 Acife_0224 133eea724e2a97c8f3ab34658766be32 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 71 82 3.7E-12 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Acife_0224 133eea724e2a97c8f3ab34658766be32 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 3.7E-12 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Acife_0224 133eea724e2a97c8f3ab34658766be32 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 3.7E-12 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Acife_0224 133eea724e2a97c8f3ab34658766be32 389 Gene3D G3DSA:2.60.410.10 283 373 6.6E-9 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Acife_0224 133eea724e2a97c8f3ab34658766be32 389 SMART SM00936 283 374 1.8E-6 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Acife_0224 133eea724e2a97c8f3ab34658766be32 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 47 262 2.6E-51 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Acife_0224 133eea724e2a97c8f3ab34658766be32 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 1.6E-7 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Acife_0224 133eea724e2a97c8f3ab34658766be32 389 SUPERFAMILY SSF69189 285 376 6.28E-8 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Acife_0224 133eea724e2a97c8f3ab34658766be32 389 SUPERFAMILY SSF56601 5 281 3.9E-51 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Acife_2476 c49d8e5c52c2eff93a43f9c2532c4613 228 SUPERFAMILY SSF46548 16 105 4.19E-15 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Acife_2476 c49d8e5c52c2eff93a43f9c2532c4613 228 Pfam PF13183 4Fe-4S dicluster domain 24 86 3.5E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_2476 c49d8e5c52c2eff93a43f9c2532c4613 228 Gene3D G3DSA:1.10.1060.10 3 105 1.8E-7 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Acife_2476 c49d8e5c52c2eff93a43f9c2532c4613 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 73 84 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_0500 72c99b40f9822eac2859167918c2db03 1036 Gene3D G3DSA:3.30.70.1440 663 861 2.1E-253 T 12-10-2018 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 SUPERFAMILY SSF82866 799 1032 2.09E-44 T 12-10-2018 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 SUPERFAMILY SSF82714 186 268 5.62E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0500 72c99b40f9822eac2859167918c2db03 1036 Gene3D G3DSA:1.20.1640.10 15 504 2.1E-253 T 12-10-2018 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 Gene3D G3DSA:3.30.70.1320 135 327 2.1E-253 T 12-10-2018 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 Gene3D G3DSA:3.30.70.1430 42 810 2.1E-253 T 12-10-2018 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 SUPERFAMILY SSF82866 293 496 8.11E-40 T 12-10-2018 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 SUPERFAMILY SSF82693 138 325 6.8E-18 T 12-10-2018 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 Gene3D G3DSA:3.30.2090.10 182 273 2.1E-253 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0500 72c99b40f9822eac2859167918c2db03 1036 SUPERFAMILY SSF82693 42 127 6.63E-20 T 12-10-2018 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1032 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 Pfam PF00873 AcrB/AcrD/AcrF family 7 1027 4.1E-224 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 Gene3D G3DSA:1.20.1640.10 505 1025 2.1E-253 T 12-10-2018 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 Gene3D G3DSA:3.30.70.1430 559 662 2.1E-253 T 12-10-2018 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 Gene3D G3DSA:3.30.2090.10 714 802 2.1E-253 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0500 72c99b40f9822eac2859167918c2db03 1036 SUPERFAMILY SSF82714 714 797 3.27E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0500 72c99b40f9822eac2859167918c2db03 1036 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0500 72c99b40f9822eac2859167918c2db03 1036 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 2.9E-36 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2208 0ba3ed2cef207d76722435667c6ddaa7 288 Gene3D G3DSA:3.30.870.10 134 284 7.4E-36 T 12-10-2018 Acife_2208 0ba3ed2cef207d76722435667c6ddaa7 288 Pfam PF13091 PLD-like domain 151 271 2.4E-24 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Acife_2208 0ba3ed2cef207d76722435667c6ddaa7 288 SUPERFAMILY SSF56024 141 282 1.61E-30 T 12-10-2018 Acife_2985 1ca268e8e3d4b5a444a32580b5e73b50 471 Pfam PF01844 HNH endonuclease 209 252 1.9E-11 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Acife_2985 1ca268e8e3d4b5a444a32580b5e73b50 471 Gene3D G3DSA:3.30.40.60 177 304 8.3E-17 T 12-10-2018 Acife_2985 1ca268e8e3d4b5a444a32580b5e73b50 471 Pfam PF14239 RRXRR protein 3 190 7.1E-64 T 12-10-2018 IPR025938 RRXRR domain Acife_2985 1ca268e8e3d4b5a444a32580b5e73b50 471 SMART SM00507 196 247 3.4E-12 T 12-10-2018 IPR003615 HNH nuclease Acife_2764 240d28246aceab756a6cc6671b184c97 223 SUPERFAMILY SSF51419 3 216 6.69E-59 T 12-10-2018 IPR029066 PLP-binding barrel Acife_2764 240d28246aceab756a6cc6671b184c97 223 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 217 26.946 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Acife_2764 240d28246aceab756a6cc6671b184c97 223 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 68 82 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Acife_2764 240d28246aceab756a6cc6671b184c97 223 Pfam PF01168 Alanine racemase, N-terminal domain 23 218 3.8E-23 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_2764 240d28246aceab756a6cc6671b184c97 223 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 22 218 9.8E-57 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Acife_2764 240d28246aceab756a6cc6671b184c97 223 PIRSF PIRSF004848 1 222 2.1E-57 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Acife_2764 240d28246aceab756a6cc6671b184c97 223 Gene3D G3DSA:3.20.20.10 1 222 1.4E-64 T 12-10-2018 IPR029066 PLP-binding barrel Acife_0144 e1c878fc28bf4f4f5c76c4fa5a20102c 250 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 3.1E-97 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0144 e1c878fc28bf4f4f5c76c4fa5a20102c 250 Gene3D G3DSA:1.10.10.200 1 80 1.5E-33 T 12-10-2018 IPR017856 Integrase-like, N-terminal Acife_0144 e1c878fc28bf4f4f5c76c4fa5a20102c 250 Pfam PF01709 Transcriptional regulator 5 235 1.1E-95 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0144 e1c878fc28bf4f4f5c76c4fa5a20102c 250 Gene3D G3DSA:3.30.70.980 85 235 5.3E-56 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0144 e1c878fc28bf4f4f5c76c4fa5a20102c 250 Gene3D G3DSA:3.30.70.980 130 204 5.3E-56 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0144 e1c878fc28bf4f4f5c76c4fa5a20102c 250 SUPERFAMILY SSF75625 3 245 1.44E-95 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0144 e1c878fc28bf4f4f5c76c4fa5a20102c 250 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.482 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0865 2bf6bea1a4e92beee8f5bda04144ec8b 440 SUPERFAMILY SSF55347 140 305 1.96E-51 T 12-10-2018 Acife_0865 2bf6bea1a4e92beee8f5bda04144ec8b 440 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 14 132 8.4E-19 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Acife_0865 2bf6bea1a4e92beee8f5bda04144ec8b 440 SUPERFAMILY SSF51735 5 161 2.48E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0865 2bf6bea1a4e92beee8f5bda04144ec8b 440 SUPERFAMILY SSF55021 355 426 7.82E-13 T 12-10-2018 Acife_0865 2bf6bea1a4e92beee8f5bda04144ec8b 440 Gene3D G3DSA:3.40.50.720 8 343 9.6E-166 T 12-10-2018 Acife_0865 2bf6bea1a4e92beee8f5bda04144ec8b 440 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 186 208 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Acife_0865 2bf6bea1a4e92beee8f5bda04144ec8b 440 PIRSF PIRSF000098 5 437 2.9E-159 T 12-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Acife_0865 2bf6bea1a4e92beee8f5bda04144ec8b 440 Pfam PF01842 ACT domain 357 423 9.7E-14 T 12-10-2018 IPR002912 ACT domain Acife_0865 2bf6bea1a4e92beee8f5bda04144ec8b 440 Pfam PF00742 Homoserine dehydrogenase 140 318 1.2E-62 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Acife_0865 2bf6bea1a4e92beee8f5bda04144ec8b 440 Gene3D G3DSA:3.30.360.10 139 351 9.6E-166 T 12-10-2018 Acife_0865 2bf6bea1a4e92beee8f5bda04144ec8b 440 Gene3D G3DSA:3.30.70.260 352 425 9.6E-166 T 12-10-2018 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 SUPERFAMILY SSF51905 9 317 3.42E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 135 147 1.6E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 262 1.6E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 68 78 1.6E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 1.6E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 1.6E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 14 36 1.6E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 47 62 1.6E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 150 174 1.6E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 202 218 1.6E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 Gene3D G3DSA:3.50.50.60 124 247 2.4E-119 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 Gene3D G3DSA:3.50.50.60 15 316 2.4E-119 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 2.0E-37 T 12-10-2018 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 2.0E-37 T 12-10-2018 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 2.0E-37 T 12-10-2018 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 2.0E-37 T 12-10-2018 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 2.0E-37 T 12-10-2018 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 142 162 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 15 317 6.4E-122 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Acife_2660 67d8e3d336ae65f41bbeb4b7aab6aac2 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 306 4.4E-48 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_1061 44ec8fcbb2d8ee87505debdbfcfbfab6 181 PIRSF PIRSF004982 1 181 1.6E-39 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Acife_1061 44ec8fcbb2d8ee87505debdbfcfbfab6 181 Pfam PF03843 Outer membrane lipoprotein Slp family 16 169 8.8E-35 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Acife_1363 35ef18b5971525387bb07823cb70a01a 623 Gene3D G3DSA:1.10.150.20 556 618 6.3E-19 T 12-10-2018 Acife_1363 35ef18b5971525387bb07823cb70a01a 623 Hamap MF_00203 UvrABC system protein C [uvrC]. 19 617 26.447 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Acife_1363 35ef18b5971525387bb07823cb70a01a 623 SUPERFAMILY SSF47781 534 619 5.72E-20 T 12-10-2018 IPR010994 RuvA domain 2-like Acife_1363 35ef18b5971525387bb07823cb70a01a 623 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 396 552 2.2E-46 T 12-10-2018 IPR001162 UvrC family homology region Acife_1363 35ef18b5971525387bb07823cb70a01a 623 SUPERFAMILY SSF46600 206 258 3.53E-12 T 12-10-2018 IPR036876 UVR domain superfamily Acife_1363 35ef18b5971525387bb07823cb70a01a 623 Gene3D G3DSA:3.40.1440.10 21 117 5.7E-31 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Acife_1363 35ef18b5971525387bb07823cb70a01a 623 Pfam PF01541 GIY-YIG catalytic domain 33 108 5.2E-11 T 12-10-2018 IPR000305 GIY-YIG endonuclease Acife_1363 35ef18b5971525387bb07823cb70a01a 623 Pfam PF12826 Helix-hairpin-helix motif 570 620 1.7E-6 T 12-10-2018 Acife_1363 35ef18b5971525387bb07823cb70a01a 623 SUPERFAMILY SSF82771 32 115 7.45E-22 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Acife_1363 35ef18b5971525387bb07823cb70a01a 623 Pfam PF02151 UvrB/uvrC motif 220 253 6.0E-6 T 12-10-2018 IPR001943 UVR domain GO:0005515 Acife_1363 35ef18b5971525387bb07823cb70a01a 623 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 25 598 1.2E-165 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Acife_1363 35ef18b5971525387bb07823cb70a01a 623 SMART SM00465 32 113 1.3E-20 T 12-10-2018 IPR000305 GIY-YIG endonuclease Acife_1363 35ef18b5971525387bb07823cb70a01a 623 Gene3D G3DSA:3.30.420.340 392 552 7.2E-44 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily Acife_0454 cb23a99a2c18e2e74190e9516fc3def3 150 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 114 3.0E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Acife_0454 cb23a99a2c18e2e74190e9516fc3def3 150 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Acife_0454 cb23a99a2c18e2e74190e9516fc3def3 150 SUPERFAMILY SSF54593 1 128 3.36E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_0454 cb23a99a2c18e2e74190e9516fc3def3 150 Gene3D G3DSA:3.10.180.10 1 144 1.6E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_1635 81c109bfa7c43aea0a7ce458b6e121d4 402 SUPERFAMILY SSF53383 5 370 2.55E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_1635 81c109bfa7c43aea0a7ce458b6e121d4 402 Pfam PF00266 Aminotransferase class-V 5 365 1.3E-89 T 12-10-2018 IPR000192 Aminotransferase class V domain Acife_1635 81c109bfa7c43aea0a7ce458b6e121d4 402 PIRSF PIRSF005572 1 382 2.4E-128 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Acife_1635 81c109bfa7c43aea0a7ce458b6e121d4 402 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Acife_1635 81c109bfa7c43aea0a7ce458b6e121d4 402 Gene3D G3DSA:1.10.260.50 15 280 4.0E-139 T 12-10-2018 Acife_1635 81c109bfa7c43aea0a7ce458b6e121d4 402 Gene3D G3DSA:3.90.1150.10 5 369 4.0E-139 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1635 81c109bfa7c43aea0a7ce458b6e121d4 402 Gene3D G3DSA:3.40.640.10 61 236 4.0E-139 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1635 81c109bfa7c43aea0a7ce458b6e121d4 402 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 5 384 1.1E-191 T 12-10-2018 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 SUPERFAMILY SSF82866 798 1024 1.11E-38 T 12-10-2018 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 SUPERFAMILY SSF82866 291 499 1.57E-32 T 12-10-2018 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 Gene3D G3DSA:1.20.1640.10 16 504 2.8E-251 T 12-10-2018 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 Gene3D G3DSA:3.30.70.1440 665 864 2.8E-251 T 12-10-2018 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 Gene3D G3DSA:3.30.70.1430 42 812 2.8E-251 T 12-10-2018 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 Gene3D G3DSA:3.30.70.1320 136 328 2.8E-251 T 12-10-2018 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 Gene3D G3DSA:3.30.2090.10 716 804 2.8E-251 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 SUPERFAMILY SSF82714 184 264 3.4E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 SUPERFAMILY SSF82693 42 132 2.14E-22 T 12-10-2018 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 Gene3D G3DSA:1.20.1640.10 505 1018 2.8E-251 T 12-10-2018 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 SUPERFAMILY SSF82693 140 311 1.67E-15 T 12-10-2018 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 Gene3D G3DSA:3.30.70.1430 564 664 2.8E-251 T 12-10-2018 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 SUPERFAMILY SSF82714 714 800 2.49E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 Gene3D G3DSA:3.30.2090.10 181 273 2.8E-251 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 2.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 2.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.0E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0822 8cbb0f52db5c21e35a5fe3fa8012ef96 1031 Pfam PF00873 AcrB/AcrD/AcrF family 5 1018 9.5E-238 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2467 b8732a74b54e097dc8023abbf465e254 373 SMART SM00729 65 269 9.0E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Acife_2467 b8732a74b54e097dc8023abbf465e254 373 Gene3D G3DSA:3.20.20.70 48 324 6.3E-9 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2467 b8732a74b54e097dc8023abbf465e254 373 SUPERFAMILY SSF102114 65 307 8.24E-19 T 12-10-2018 Acife_2467 b8732a74b54e097dc8023abbf465e254 373 Pfam PF04055 Radical SAM superfamily 74 217 6.3E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_2085 67d8b074feb5499929e199280f7cdea6 189 SUPERFAMILY SSF53448 28 86 1.88E-6 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3228 2f0bea759e06c7350ad56dfc20d86e35 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 251 1.9E-56 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Acife_3228 2f0bea759e06c7350ad56dfc20d86e35 326 Gene3D G3DSA:3.90.25.10 172 304 2.3E-121 T 12-10-2018 Acife_3228 2f0bea759e06c7350ad56dfc20d86e35 326 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 322 1.9E-130 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Acife_3228 2f0bea759e06c7350ad56dfc20d86e35 326 SUPERFAMILY SSF51735 1 324 2.22E-88 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_3228 2f0bea759e06c7350ad56dfc20d86e35 326 Gene3D G3DSA:3.40.50.720 3 251 2.3E-121 T 12-10-2018 Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 Gene3D G3DSA:2.60.260.20 255 365 4.4E-28 T 12-10-2018 Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 Gene3D G3DSA:1.10.287.110 1 118 2.5E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 SUPERFAMILY SSF49493 260 345 2.75E-20 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 SMART SM00271 4 62 1.5E-32 T 12-10-2018 IPR001623 DnaJ domain Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 Pfam PF00684 DnaJ central domain 148 208 1.2E-13 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 40.846 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 Pfam PF00226 DnaJ domain 5 67 5.9E-28 T 12-10-2018 IPR001623 DnaJ domain Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 SUPERFAMILY SSF49493 120 257 9.03E-19 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 12-10-2018 IPR018253 DnaJ domain, conserved site Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 PRINTS PR00625 DnaJ domain signature 25 40 1.1E-30 T 12-10-2018 IPR001623 DnaJ domain Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 PRINTS PR00625 DnaJ domain signature 7 25 1.1E-30 T 12-10-2018 IPR001623 DnaJ domain Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 PRINTS PR00625 DnaJ domain signature 62 81 1.1E-30 T 12-10-2018 IPR001623 DnaJ domain Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 PRINTS PR00625 DnaJ domain signature 42 62 1.1E-30 T 12-10-2018 IPR001623 DnaJ domain Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 2.9E-134 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 SUPERFAMILY SSF46565 1 106 5.5E-35 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 Gene3D G3DSA:2.10.230.10 148 208 6.3E-38 T 12-10-2018 Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 Gene3D G3DSA:2.60.260.20 119 250 6.3E-38 T 12-10-2018 Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 SUPERFAMILY SSF57938 135 212 1.05E-21 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Acife_0593 29be92558f35b1a0f4cab342ad97b895 377 Pfam PF01556 DnaJ C terminal domain 122 334 2.0E-41 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal Acife_1431 f60dcfee9ab080079569b7833fcbd854 245 Pfam PF00994 Probable molybdopterin binding domain 7 160 1.3E-17 T 12-10-2018 IPR001453 MoaB/Mog domain Acife_1431 f60dcfee9ab080079569b7833fcbd854 245 SMART SM00852 6 166 2.2E-20 T 12-10-2018 IPR001453 MoaB/Mog domain Acife_1431 f60dcfee9ab080079569b7833fcbd854 245 Gene3D G3DSA:3.40.980.10 2 163 6.6E-33 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Acife_1431 f60dcfee9ab080079569b7833fcbd854 245 SUPERFAMILY SSF53218 4 161 1.3E-22 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Acife_2554 23b9404f902f768bf4d29703c0b26284 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 117 2.7E-41 T 12-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2554 23b9404f902f768bf4d29703c0b26284 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 20.99 T 12-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 Acife_2554 23b9404f902f768bf4d29703c0b26284 118 Gene3D G3DSA:1.20.58.1610 1 118 1.3E-46 T 12-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_0334 82da6cb76001a6ccfa22663fa64e94db 447 PRINTS PR00599 Methionine aminopeptidase-1 signature 376 388 3.0E-5 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Acife_0334 82da6cb76001a6ccfa22663fa64e94db 447 PRINTS PR00599 Methionine aminopeptidase-1 signature 257 273 3.0E-5 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Acife_0334 82da6cb76001a6ccfa22663fa64e94db 447 PRINTS PR00599 Methionine aminopeptidase-1 signature 235 248 3.0E-5 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Acife_0334 82da6cb76001a6ccfa22663fa64e94db 447 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 352 364 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Acife_0334 82da6cb76001a6ccfa22663fa64e94db 447 SUPERFAMILY SSF55920 179 439 1.16E-80 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like Acife_0334 82da6cb76001a6ccfa22663fa64e94db 447 Gene3D G3DSA:3.40.350.10 8 175 1.4E-53 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Acife_0334 82da6cb76001a6ccfa22663fa64e94db 447 SUPERFAMILY SSF53092 10 178 7.67E-50 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Acife_0334 82da6cb76001a6ccfa22663fa64e94db 447 Pfam PF05195 Aminopeptidase P, N-terminal domain 11 127 9.5E-36 T 12-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Acife_0334 82da6cb76001a6ccfa22663fa64e94db 447 Gene3D G3DSA:3.90.230.10 177 443 3.2E-95 T 12-10-2018 Acife_0334 82da6cb76001a6ccfa22663fa64e94db 447 SMART SM01011 6 140 1.1E-54 T 12-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Acife_0334 82da6cb76001a6ccfa22663fa64e94db 447 Pfam PF00557 Metallopeptidase family M24 185 418 6.9E-64 T 12-10-2018 IPR000994 Peptidase M24 Acife_2464 e7c101490234e081572ae073f73fce6d 378 Gene3D G3DSA:3.20.20.70 48 294 2.1E-17 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2464 e7c101490234e081572ae073f73fce6d 378 SUPERFAMILY SSF102114 58 283 1.96E-23 T 12-10-2018 Acife_2464 e7c101490234e081572ae073f73fce6d 378 Pfam PF04055 Radical SAM superfamily 65 239 3.0E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_2464 e7c101490234e081572ae073f73fce6d 378 SMART SM00729 58 279 4.5E-17 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Acife_1235 e7de8a34d219f9b961aac4f5bc676f04 174 Pfam PF00293 NUDIX domain 7 134 5.1E-24 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Acife_1235 e7de8a34d219f9b961aac4f5bc676f04 174 SUPERFAMILY SSF55811 3 147 1.62E-28 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Acife_1235 e7de8a34d219f9b961aac4f5bc676f04 174 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Acife_1235 e7de8a34d219f9b961aac4f5bc676f04 174 PRINTS PR00502 NUDIX hydrolase family signature 33 47 5.9E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Acife_1235 e7de8a34d219f9b961aac4f5bc676f04 174 PRINTS PR00502 NUDIX hydrolase family signature 47 62 5.9E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Acife_1235 e7de8a34d219f9b961aac4f5bc676f04 174 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 152 34.668 T 12-10-2018 IPR022927 RNA pyrophosphohydrolase RppH Acife_1235 e7de8a34d219f9b961aac4f5bc676f04 174 Gene3D G3DSA:3.90.79.10 1 154 7.3E-41 T 12-10-2018 Acife_1780 21a2e4c40113e40750ae49c565b16287 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 106 1.7E-14 T 12-10-2018 IPR022569 Ferredoxin, C-terminal Acife_1780 21a2e4c40113e40750ae49c565b16287 107 SUPERFAMILY SSF54862 3 98 3.87E-24 T 12-10-2018 Acife_1780 21a2e4c40113e40750ae49c565b16287 107 Gene3D G3DSA:3.30.70.20 2 102 3.8E-31 T 12-10-2018 Acife_1780 21a2e4c40113e40750ae49c565b16287 107 Pfam PF00037 4Fe-4S binding domain 34 55 4.4E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_1780 21a2e4c40113e40750ae49c565b16287 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 6.5E-16 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Acife_1780 21a2e4c40113e40750ae49c565b16287 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 6.5E-16 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Acife_1780 21a2e4c40113e40750ae49c565b16287 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 6.5E-16 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Acife_1780 21a2e4c40113e40750ae49c565b16287 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_0855 f638d1f8912923d07dcd80178dda844e 387 Gene3D G3DSA:3.30.70.1350 212 293 1.5E-17 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Acife_0855 f638d1f8912923d07dcd80178dda844e 387 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 294 5.2E-71 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Acife_0855 f638d1f8912923d07dcd80178dda844e 387 Pfam PF01545 Cation efflux family 23 210 3.6E-49 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Acife_0855 f638d1f8912923d07dcd80178dda844e 387 SUPERFAMILY SSF160240 215 294 2.09E-17 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Acife_0855 f638d1f8912923d07dcd80178dda844e 387 Pfam PF16916 Dimerisation domain of Zinc Transporter 216 291 6.5E-20 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Acife_0855 f638d1f8912923d07dcd80178dda844e 387 Gene3D G3DSA:1.20.1510.10 14 211 2.3E-62 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Acife_0855 f638d1f8912923d07dcd80178dda844e 387 SUPERFAMILY SSF161111 12 212 1.44E-55 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.349 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 SUPERFAMILY SSF50447 207 303 1.96E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.1E-227 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.3E-59 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 SUPERFAMILY SSF50465 300 395 1.93E-36 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.8E-34 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 Gene3D G3DSA:2.40.30.10 340 395 1.3E-26 T 12-10-2018 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 9.3E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 9.3E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 9.3E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.3E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.3E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 Gene3D G3DSA:2.40.30.10 209 336 1.3E-53 T 12-10-2018 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 Gene3D G3DSA:3.40.50.300 1 205 1.0E-70 T 12-10-2018 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 9.8E-15 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 SUPERFAMILY SSF52540 5 221 4.83E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2724 5a6dff88db83f22b4e69a408f0f15f86 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.1E-15 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.349 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 SUPERFAMILY SSF50447 207 303 1.96E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.1E-227 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.3E-59 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 SUPERFAMILY SSF50465 300 395 1.93E-36 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.8E-34 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 Gene3D G3DSA:2.40.30.10 340 395 1.3E-26 T 12-10-2018 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 9.3E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 9.3E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 9.3E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.3E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.3E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 Gene3D G3DSA:2.40.30.10 209 336 1.3E-53 T 12-10-2018 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 Gene3D G3DSA:3.40.50.300 1 205 1.0E-70 T 12-10-2018 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 9.8E-15 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 SUPERFAMILY SSF52540 5 221 4.83E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2712 5a6dff88db83f22b4e69a408f0f15f86 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.1E-15 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Acife_2691 5b9e9a22ba34c07d3d891c8e10835843 145 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2691 5b9e9a22ba34c07d3d891c8e10835843 145 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 5.6E-48 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2691 5b9e9a22ba34c07d3d891c8e10835843 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.145 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Acife_2691 5b9e9a22ba34c07d3d891c8e10835843 145 SUPERFAMILY SSF52080 4 144 7.33E-42 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Acife_2691 5b9e9a22ba34c07d3d891c8e10835843 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 1.8E-30 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P Acife_2691 5b9e9a22ba34c07d3d891c8e10835843 145 Gene3D G3DSA:3.100.10.10 71 145 2.2E-13 T 12-10-2018 Acife_2628 5085e9cddc390f136cf0d58cbdcb4bc0 312 Gene3D G3DSA:3.40.50.620 17 222 1.3E-52 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2628 5085e9cddc390f136cf0d58cbdcb4bc0 312 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 40 265 1.5E-46 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Acife_2628 5085e9cddc390f136cf0d58cbdcb4bc0 312 SUPERFAMILY SSF52402 17 220 1.14E-62 T 12-10-2018 Acife_2628 5085e9cddc390f136cf0d58cbdcb4bc0 312 PIRSF PIRSF002936 10 312 7.5E-137 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Acife_2628 5085e9cddc390f136cf0d58cbdcb4bc0 312 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 19 312 1.1E-124 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Acife_0759 6922b226e183c04b5f5725a74edde396 516 Pfam PF11412 Disulphide bond corrector protein DsbC 9 120 1.1E-23 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Acife_0759 6922b226e183c04b5f5725a74edde396 516 SUPERFAMILY SSF74863 8 124 1.7E-19 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Acife_0759 6922b226e183c04b5f5725a74edde396 516 Gene3D G3DSA:2.60.40.1250 2 138 1.1E-25 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Acife_0759 6922b226e183c04b5f5725a74edde396 516 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 199 404 1.6E-20 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Acife_3152 e44c898f99aee92bf1ffd2a9e12a0a12 307 Gene3D G3DSA:1.10.10.10 2 92 4.9E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_3152 e44c898f99aee92bf1ffd2a9e12a0a12 307 SUPERFAMILY SSF46785 2 113 1.76E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_3152 e44c898f99aee92bf1ffd2a9e12a0a12 307 SUPERFAMILY SSF53850 92 294 5.91E-31 T 12-10-2018 Acife_3152 e44c898f99aee92bf1ffd2a9e12a0a12 307 Gene3D G3DSA:3.40.190.10 93 290 4.4E-34 T 12-10-2018 Acife_3152 e44c898f99aee92bf1ffd2a9e12a0a12 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.2E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_3152 e44c898f99aee92bf1ffd2a9e12a0a12 307 Gene3D G3DSA:3.40.190.10 168 268 4.4E-34 T 12-10-2018 Acife_3152 e44c898f99aee92bf1ffd2a9e12a0a12 307 Pfam PF03466 LysR substrate binding domain 91 293 2.2E-33 T 12-10-2018 IPR005119 LysR, substrate-binding Acife_0671 31dfa73c4f6ccee508fa96831863b3cf 319 SUPERFAMILY SSF88697 6 124 2.58E-15 T 12-10-2018 IPR015947 PUA-like superfamily Acife_0671 31dfa73c4f6ccee508fa96831863b3cf 319 Pfam PF13207 AAA domain 151 266 1.0E-14 T 12-10-2018 Acife_0671 31dfa73c4f6ccee508fa96831863b3cf 319 Gene3D G3DSA:3.40.50.300 143 308 4.8E-33 T 12-10-2018 Acife_0671 31dfa73c4f6ccee508fa96831863b3cf 319 SUPERFAMILY SSF52540 146 285 2.64E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SUPERFAMILY SSF55785 497 617 1.55E-24 T 12-10-2018 IPR035965 PAS domain superfamily Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 Pfam PF00989 PAS fold 509 602 2.0E-10 T 12-10-2018 IPR013767 PAS fold GO:0006355 Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SMART SM00086 579 619 0.0054 T 12-10-2018 IPR001610 PAC motif Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SMART SM00086 886 927 5.8 T 12-10-2018 IPR001610 PAC motif Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SUPERFAMILY SSF55781 328 493 9.81E-11 T 12-10-2018 Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 Pfam PF13188 PAS domain 814 864 0.0026 T 12-10-2018 IPR000014 PAS domain Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 Gene3D G3DSA:3.30.450.40 628 811 4.0E-17 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 Gene3D G3DSA:3.30.450.40 315 496 6.0E-13 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 934 1098 1.6E-42 T 12-10-2018 IPR000160 GGDEF domain Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SUPERFAMILY SSF55073 943 1097 9.42E-45 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 Pfam PF00990 Diguanylate cyclase, GGDEF domain 940 1097 9.1E-43 T 12-10-2018 IPR000160 GGDEF domain Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SMART SM00052 1108 1351 8.0E-61 T 12-10-2018 IPR001633 EAL domain Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 Gene3D G3DSA:3.30.70.270 932 1101 9.0E-52 T 12-10-2018 Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SUPERFAMILY SSF141868 1118 1358 4.18E-61 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 Gene3D G3DSA:3.30.450.20 497 615 3.8E-27 T 12-10-2018 Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SUPERFAMILY SSF55785 814 927 9.95E-8 T 12-10-2018 IPR035965 PAS domain superfamily Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SUPERFAMILY SSF55781 642 799 8.51E-14 T 12-10-2018 Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SMART SM00267 927 1101 1.8E-55 T 12-10-2018 IPR000160 GGDEF domain Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 Pfam PF13185 GAF domain 654 797 1.2E-13 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 503 625 6.6E-23 T 12-10-2018 IPR000014 PAS domain Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 Gene3D G3DSA:3.30.450.20 813 929 9.1E-10 T 12-10-2018 Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SMART SM00091 811 879 10.0 T 12-10-2018 IPR000014 PAS domain Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SMART SM00091 507 573 4.1E-9 T 12-10-2018 IPR000014 PAS domain Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SMART SM00065 335 496 0.0025 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 SMART SM00065 655 807 0.018 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 Pfam PF00563 EAL domain 1115 1346 1.2E-50 T 12-10-2018 IPR001633 EAL domain Acife_0027 6add8f8d667fdc9d0ab2cf6adfd39c08 1477 Gene3D G3DSA:3.20.20.450 1111 1368 2.4E-66 T 12-10-2018 IPR035919 EAL domain superfamily Acife_1429 1ca9e28c8fac049a7dc7578cecfd2df9 261 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 9 237 1.6E-108 T 12-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 Acife_1429 1ca9e28c8fac049a7dc7578cecfd2df9 261 Gene3D G3DSA:3.40.50.300 1 255 1.6E-92 T 12-10-2018 Acife_1429 1ca9e28c8fac049a7dc7578cecfd2df9 261 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 10 236 1.2E-99 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related Acife_1429 1ca9e28c8fac049a7dc7578cecfd2df9 261 PIRSF PIRSF028756 1 261 4.5E-110 T 12-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Acife_1429 1ca9e28c8fac049a7dc7578cecfd2df9 261 SUPERFAMILY SSF52540 41 228 1.03E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2768 27f3aaf81cbf848426e4b364dea31f1e 316 SUPERFAMILY SSF102114 9 311 2.22E-88 T 12-10-2018 Acife_2768 27f3aaf81cbf848426e4b364dea31f1e 316 TIGRFAM TIGR00433 bioB: biotin synthase 15 311 1.5E-118 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Acife_2768 27f3aaf81cbf848426e4b364dea31f1e 316 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 221 311 3.1E-18 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Acife_2768 27f3aaf81cbf848426e4b364dea31f1e 316 SMART SM00876 221 313 3.5E-41 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Acife_2768 27f3aaf81cbf848426e4b364dea31f1e 316 SMART SM00729 44 256 2.3E-35 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Acife_2768 27f3aaf81cbf848426e4b364dea31f1e 316 Pfam PF04055 Radical SAM superfamily 51 207 1.1E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_2768 27f3aaf81cbf848426e4b364dea31f1e 316 Gene3D G3DSA:3.20.20.70 8 316 4.4E-120 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2768 27f3aaf81cbf848426e4b364dea31f1e 316 Hamap MF_01694 Biotin synthase [bioB]. 6 314 40.894 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Acife_2768 27f3aaf81cbf848426e4b364dea31f1e 316 PIRSF PIRSF001619 2 316 3.8E-124 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Acife_1445 a2fa563e243463f802ae52b46545f55d 413 Gene3D G3DSA:3.40.47.10 256 400 3.3E-57 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_1445 a2fa563e243463f802ae52b46545f55d 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 4.9E-200 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Acife_1445 a2fa563e243463f802ae52b46545f55d 413 PIRSF PIRSF000447 1 413 1.5E-190 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Acife_1445 a2fa563e243463f802ae52b46545f55d 413 SUPERFAMILY SSF53901 2 251 5.98E-77 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_1445 a2fa563e243463f802ae52b46545f55d 413 Gene3D G3DSA:3.40.47.10 1 254 2.0E-94 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_1445 a2fa563e243463f802ae52b46545f55d 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 245 3.3E-61 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Acife_1445 a2fa563e243463f802ae52b46545f55d 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 5.3E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Acife_1445 a2fa563e243463f802ae52b46545f55d 413 SMART SM00825 Beta-ketoacyl synthase 5 413 1.2E-17 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Acife_1445 a2fa563e243463f802ae52b46545f55d 413 SUPERFAMILY SSF53901 214 411 1.15E-74 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_1445 a2fa563e243463f802ae52b46545f55d 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 SMART SM01340 217 335 6.2E-56 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 Gene3D G3DSA:2.30.42.20 419 590 3.4E-50 T 12-10-2018 Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 SUPERFAMILY SSF118116 412 595 1.57E-48 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 SUPERFAMILY SSF55874 8 205 6.16E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 131 6.5E-11 T 12-10-2018 Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 Gene3D G3DSA:3.30.1370.100 459 548 3.4E-50 T 12-10-2018 Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 Gene3D G3DSA:3.30.230.10 222 334 6.6E-36 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 Gene3D G3DSA:3.30.565.10 8 221 6.3E-62 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 SMART SM00853 417 553 2.7E-35 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 7 593 26.862 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 SUPERFAMILY SSF54211 197 335 2.39E-36 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 Pfam PF08676 MutL C terminal dimerisation domain 413 553 8.5E-35 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 99 105 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 218 334 7.4E-38 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Acife_1509 d5e2b2212bdf3510224719dc80fde489 597 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 8 315 1.5E-92 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 SUPERFAMILY SSF102735 1 117 3.27E-29 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 155 227 1.3E-10 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 PIRSF PIRSF003095 1 422 1.1E-102 T 12-10-2018 IPR005215 Trigger factor GO:0015031 Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 Gene3D G3DSA:1.10.3120.10 122 406 2.6E-78 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 SUPERFAMILY SSF54534 131 246 7.46E-27 T 12-10-2018 Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 TIGRFAM TIGR00115 tig: trigger factor 11 401 3.6E-114 T 12-10-2018 IPR005215 Trigger factor GO:0015031 Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 Gene3D G3DSA:3.30.70.1050 1 115 1.1E-30 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 SUPERFAMILY SSF109998 247 417 6.57E-35 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 Pfam PF05697 Bacterial trigger factor protein (TF) 3 141 1.4E-33 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 402 1.3E-21 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 Hamap MF_00303 Trigger factor [tig]. 1 407 18.515 T 12-10-2018 IPR005215 Trigger factor GO:0015031 Acife_1400 1fbc2ce7ac9516c3cbd9de6baac8942a 428 Gene3D G3DSA:3.10.50.40 149 245 2.6E-78 T 12-10-2018 Acife_2959 c1e340077fe0f59519a8891eaed49364 98 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 86 1.7E-18 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Acife_2959 c1e340077fe0f59519a8891eaed49364 98 SUPERFAMILY SSF50118 2 93 3.27E-22 T 12-10-2018 Acife_2959 c1e340077fe0f59519a8891eaed49364 98 Gene3D G3DSA:2.30.30.110 1 97 1.5E-18 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Acife_2912 1e19112aa2d61a019b8081fbd7eb9b83 341 Gene3D G3DSA:3.30.200.20 16 100 9.5E-17 T 12-10-2018 Acife_2912 1e19112aa2d61a019b8081fbd7eb9b83 341 Pfam PF01636 Phosphotransferase enzyme family 36 266 1.0E-26 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase Acife_2912 1e19112aa2d61a019b8081fbd7eb9b83 341 Gene3D G3DSA:3.90.1200.10 101 337 2.3E-65 T 12-10-2018 Acife_2912 1e19112aa2d61a019b8081fbd7eb9b83 341 SUPERFAMILY SSF56112 22 325 5.49E-43 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Acife_0917 b3ba97314ae73d85c5e0519bbc09f0ee 424 SUPERFAMILY SSF141868 179 421 4.97E-48 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0917 b3ba97314ae73d85c5e0519bbc09f0ee 424 SMART SM00052 172 417 7.6E-25 T 12-10-2018 IPR001633 EAL domain Acife_0917 b3ba97314ae73d85c5e0519bbc09f0ee 424 Pfam PF00563 EAL domain 179 412 1.9E-39 T 12-10-2018 IPR001633 EAL domain Acife_0917 b3ba97314ae73d85c5e0519bbc09f0ee 424 Gene3D G3DSA:3.20.20.450 177 424 3.5E-49 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0917 b3ba97314ae73d85c5e0519bbc09f0ee 424 Pfam PF00990 Diguanylate cyclase, GGDEF domain 11 152 6.8E-8 T 12-10-2018 IPR000160 GGDEF domain Acife_0917 b3ba97314ae73d85c5e0519bbc09f0ee 424 Gene3D G3DSA:3.30.70.270 8 165 7.8E-13 T 12-10-2018 Acife_0917 b3ba97314ae73d85c5e0519bbc09f0ee 424 SUPERFAMILY SSF55073 10 162 3.61E-12 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_1485 d17a4b881dd91d9c0382bbebb260e82e 361 Gene3D G3DSA:3.40.640.10 38 260 3.6E-101 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1485 d17a4b881dd91d9c0382bbebb260e82e 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 352 52.538 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Acife_1485 d17a4b881dd91d9c0382bbebb260e82e 361 Gene3D G3DSA:3.90.1150.10 20 341 3.6E-101 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1485 d17a4b881dd91d9c0382bbebb260e82e 361 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 351 5.5E-89 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Acife_1485 d17a4b881dd91d9c0382bbebb260e82e 361 Pfam PF00155 Aminotransferase class I and II 26 348 2.8E-56 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Acife_1485 d17a4b881dd91d9c0382bbebb260e82e 361 SUPERFAMILY SSF53383 5 351 6.12E-73 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_1485 d17a4b881dd91d9c0382bbebb260e82e 361 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Acife_1330 c8281f8fe4c723ce70992f113256a4cf 488 SMART SM00382 271 432 0.42 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1330 c8281f8fe4c723ce70992f113256a4cf 488 SMART SM00382 27 194 1.9 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1330 c8281f8fe4c723ce70992f113256a4cf 488 SUPERFAMILY SSF52540 249 478 2.39E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1330 c8281f8fe4c723ce70992f113256a4cf 488 SUPERFAMILY SSF52540 7 232 4.11E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1330 c8281f8fe4c723ce70992f113256a4cf 488 Gene3D G3DSA:3.40.50.300 244 487 4.6E-50 T 12-10-2018 Acife_1330 c8281f8fe4c723ce70992f113256a4cf 488 Gene3D G3DSA:3.40.50.300 2 243 1.9E-39 T 12-10-2018 Acife_1330 c8281f8fe4c723ce70992f113256a4cf 488 PIRSF PIRSF039117 2 483 5.5E-133 T 12-10-2018 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Acife_1330 c8281f8fe4c723ce70992f113256a4cf 488 Pfam PF06745 KaiC 256 470 7.7E-40 T 12-10-2018 IPR014774 KaiC-like domain Acife_1330 c8281f8fe4c723ce70992f113256a4cf 488 Pfam PF06745 KaiC 11 232 1.4E-28 T 12-10-2018 IPR014774 KaiC-like domain Acife_0300 ef4dfaac2145803cda71739699fd6ad8 157 SUPERFAMILY SSF50249 3 157 4.11E-56 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_0300 ef4dfaac2145803cda71739699fd6ad8 157 PIRSF PIRSF002070 1 155 8.6E-37 T 12-10-2018 Acife_0300 ef4dfaac2145803cda71739699fd6ad8 157 Gene3D G3DSA:2.40.50.140 1 124 1.3E-46 T 12-10-2018 Acife_0300 ef4dfaac2145803cda71739699fd6ad8 157 Hamap MF_00984 Single-stranded DNA-binding protein. 4 111 36.74 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Acife_0300 ef4dfaac2145803cda71739699fd6ad8 157 Pfam PF00436 Single-strand binding protein family 4 106 4.2E-41 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Acife_0300 ef4dfaac2145803cda71739699fd6ad8 157 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 157 2.3E-54 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Acife_2432 49f5a76a7ee142a87ce042b682619e53 147 Gene3D G3DSA:1.25.40.10 16 127 7.5E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_2432 49f5a76a7ee142a87ce042b682619e53 147 SUPERFAMILY SSF81901 34 123 2.75E-14 T 12-10-2018 Acife_2432 49f5a76a7ee142a87ce042b682619e53 147 Pfam PF08238 Sel1 repeat 78 88 1.7 T 12-10-2018 IPR006597 Sel1-like repeat Acife_2432 49f5a76a7ee142a87ce042b682619e53 147 Pfam PF08238 Sel1 repeat 91 122 7.7E-4 T 12-10-2018 IPR006597 Sel1-like repeat Acife_0354 70a3ce82fa0be186a9655e4d2a936a66 241 Pfam PF10615 Protein of unknown function (DUF2470) 164 232 5.6E-13 T 12-10-2018 IPR019595 Domain of unknown function DUF2470 Acife_0354 70a3ce82fa0be186a9655e4d2a936a66 241 Gene3D G3DSA:3.20.180.10 155 236 2.1E-20 T 12-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily Acife_0354 70a3ce82fa0be186a9655e4d2a936a66 241 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 15 151 2.2E-17 T 12-10-2018 Acife_0354 70a3ce82fa0be186a9655e4d2a936a66 241 Gene3D G3DSA:2.30.110.10 2 151 7.1E-41 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Acife_0354 70a3ce82fa0be186a9655e4d2a936a66 241 SUPERFAMILY SSF50475 12 238 5.24E-50 T 12-10-2018 Acife_1521 3c3301844ff52816e03d6c767da3e50c 167 SUPERFAMILY SSF53254 3 148 1.57E-19 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Acife_1521 3c3301844ff52816e03d6c767da3e50c 167 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 74 7.6E-12 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Acife_1521 3c3301844ff52816e03d6c767da3e50c 167 Gene3D G3DSA:3.40.50.1240 2 162 3.0E-29 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Acife_1521 3c3301844ff52816e03d6c767da3e50c 167 PIRSF PIRSF000709 2 89 4.3E-4 T 12-10-2018 Acife_1521 3c3301844ff52816e03d6c767da3e50c 167 SMART SM00855 2 114 3.6E-6 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Acife_3126 1c2a5040aa7aaee3abb2077b93b6a2e3 1054 Hamap MF_01871 UPF0753 protein . 16 1029 23.541 T 12-10-2018 IPR018752 Uncharacterised protein family UPF0753 Acife_3126 1c2a5040aa7aaee3abb2077b93b6a2e3 1054 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 23 1014 4.4E-260 T 12-10-2018 IPR018752 Uncharacterised protein family UPF0753 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 SUPERFAMILY SSF56053 1 79 1.13E-19 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 173 4.5E-72 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 Gene3D G3DSA:3.90.930.12 80 174 2.1E-40 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 PIRSF PIRSF002162 1 174 6.1E-45 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 SUPERFAMILY SSF56053 80 174 1.01E-36 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 Pfam PF00347 Ribosomal protein L6 87 161 5.2E-22 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 Pfam PF00347 Ribosomal protein L6 12 79 1.6E-13 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 PRINTS PR00059 Ribosomal protein L6 signature 138 159 4.5E-35 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 PRINTS PR00059 Ribosomal protein L6 signature 68 93 4.5E-35 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 PRINTS PR00059 Ribosomal protein L6 signature 96 112 4.5E-35 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 173 36.873 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 Gene3D G3DSA:3.90.930.12 1 79 2.3E-23 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2695 c11687ffa3ce1254c0212c62eeeef434 174 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 151 159 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_0646 d1f0fe3c1cfe450b5f1a2d241b4ebfd8 411 Gene3D G3DSA:3.20.20.140 65 359 2.8E-86 T 12-10-2018 Acife_0646 d1f0fe3c1cfe450b5f1a2d241b4ebfd8 411 SUPERFAMILY SSF51338 14 80 2.24E-8 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Acife_0646 d1f0fe3c1cfe450b5f1a2d241b4ebfd8 411 Gene3D G3DSA:2.30.40.10 19 375 2.8E-86 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Acife_0646 d1f0fe3c1cfe450b5f1a2d241b4ebfd8 411 SUPERFAMILY SSF51556 64 356 1.72E-66 T 12-10-2018 IPR032466 Metal-dependent hydrolase Acife_0646 d1f0fe3c1cfe450b5f1a2d241b4ebfd8 411 Pfam PF01979 Amidohydrolase family 61 375 2.4E-39 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Acife_0370 139f7ea021a39a3af04a6e8aa8664063 1339 Pfam PF02384 N-6 DNA Methylase 465 586 9.1E-7 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Acife_0370 139f7ea021a39a3af04a6e8aa8664063 1339 SUPERFAMILY SSF53335 295 1034 4.8E-58 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0370 139f7ea021a39a3af04a6e8aa8664063 1339 Gene3D G3DSA:3.40.50.150 431 641 3.0E-25 T 12-10-2018 Acife_0370 139f7ea021a39a3af04a6e8aa8664063 1339 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 473 489 2.2E-11 T 12-10-2018 Acife_0370 139f7ea021a39a3af04a6e8aa8664063 1339 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 514 528 2.2E-11 T 12-10-2018 Acife_0370 139f7ea021a39a3af04a6e8aa8664063 1339 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 795 807 2.2E-11 T 12-10-2018 Acife_3045 6ca4e36083f5dcede4407eab86a9d748 400 Gene3D G3DSA:3.40.50.300 126 397 2.7E-81 T 12-10-2018 Acife_3045 6ca4e36083f5dcede4407eab86a9d748 400 Pfam PF00437 Type II/IV secretion system protein 27 288 2.4E-59 T 12-10-2018 IPR001482 Type II/IV secretion system protein Acife_3045 6ca4e36083f5dcede4407eab86a9d748 400 Gene3D G3DSA:3.30.450.90 3 124 2.1E-26 T 12-10-2018 Acife_3045 6ca4e36083f5dcede4407eab86a9d748 400 SUPERFAMILY SSF52540 6 390 3.26E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3045 6ca4e36083f5dcede4407eab86a9d748 400 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 219 233 - T 12-10-2018 IPR001482 Type II/IV secretion system protein Acife_0330 c6b1d7f629b8c2c75320a2351af9731a 457 Gene3D G3DSA:1.10.860.10 10 173 8.6E-53 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Acife_0330 c6b1d7f629b8c2c75320a2351af9731a 457 SMART SM00382 209 406 3.1E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0330 c6b1d7f629b8c2c75320a2351af9731a 457 SUPERFAMILY SSF52540 190 440 3.57E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0330 c6b1d7f629b8c2c75320a2351af9731a 457 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 14 449 2.4E-174 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Acife_0330 c6b1d7f629b8c2c75320a2351af9731a 457 Pfam PF00772 DnaB-like helicase N terminal domain 14 115 1.3E-34 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Acife_0330 c6b1d7f629b8c2c75320a2351af9731a 457 SUPERFAMILY SSF48024 12 123 3.4E-36 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Acife_0330 c6b1d7f629b8c2c75320a2351af9731a 457 Pfam PF03796 DnaB-like helicase C terminal domain 192 447 4.3E-113 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Acife_0330 c6b1d7f629b8c2c75320a2351af9731a 457 Gene3D G3DSA:3.40.50.300 175 453 1.9E-107 T 12-10-2018 Acife_0238 7a821e5e86a6e4c5356c8f69cd87a6f9 237 Gene3D G3DSA:3.40.50.880 1 233 5.0E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_0238 7a821e5e86a6e4c5356c8f69cd87a6f9 237 Pfam PF00117 Glutamine amidotransferase class-I 17 183 2.5E-15 T 12-10-2018 IPR017926 Glutamine amidotransferase Acife_0238 7a821e5e86a6e4c5356c8f69cd87a6f9 237 SUPERFAMILY SSF52317 15 192 2.37E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_3138 a6910078928eeced0ae3018f1e9ea674 112 Pfam PF00936 BMC domain 8 83 2.4E-24 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Acife_3138 a6910078928eeced0ae3018f1e9ea674 112 SUPERFAMILY SSF143414 8 95 2.88E-27 T 12-10-2018 IPR037233 CcmK-like superfamily Acife_3138 a6910078928eeced0ae3018f1e9ea674 112 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 8 69 9.0E-20 T 12-10-2018 Acife_3138 a6910078928eeced0ae3018f1e9ea674 112 SMART SM00877 7 84 1.3E-28 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Acife_3138 a6910078928eeced0ae3018f1e9ea674 112 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 25 44 - T 12-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Acife_3138 a6910078928eeced0ae3018f1e9ea674 112 Gene3D G3DSA:3.30.70.1710 1 106 6.3E-35 T 12-10-2018 Acife_2763 a679b77aaa43aeb972eb8829995fd144 349 Gene3D G3DSA:3.40.50.300 101 349 3.4E-101 T 12-10-2018 Acife_2763 a679b77aaa43aeb972eb8829995fd144 349 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 2.6E-150 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Acife_2763 a679b77aaa43aeb972eb8829995fd144 349 Pfam PF00437 Type II/IV secretion system protein 12 269 6.3E-46 T 12-10-2018 IPR001482 Type II/IV secretion system protein Acife_2763 a679b77aaa43aeb972eb8829995fd144 349 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 12-10-2018 IPR001482 Type II/IV secretion system protein Acife_2763 a679b77aaa43aeb972eb8829995fd144 349 SUPERFAMILY SSF52540 5 337 1.15E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2763 a679b77aaa43aeb972eb8829995fd144 349 SMART SM00382 122 256 0.0015 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2763 a679b77aaa43aeb972eb8829995fd144 349 Gene3D G3DSA:3.30.450.90 1 100 1.3E-33 T 12-10-2018 Acife_3184 c67cf94ecbee64f7f8e0dfa6e694f810 240 SMART SM00331 8 237 1.0E-5 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Acife_3184 c67cf94ecbee64f7f8e0dfa6e694f810 240 Pfam PF13672 Protein phosphatase 2C 14 196 8.8E-16 T 12-10-2018 Acife_3184 c67cf94ecbee64f7f8e0dfa6e694f810 240 SUPERFAMILY SSF81606 5 237 1.44E-41 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Acife_3184 c67cf94ecbee64f7f8e0dfa6e694f810 240 SMART SM00332 1 235 4.3E-5 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Acife_3184 c67cf94ecbee64f7f8e0dfa6e694f810 240 Gene3D G3DSA:3.60.40.10 1 238 4.9E-45 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Acife_1507 06f285b5babd96cbeef5e22fbfd2af75 151 Gene3D G3DSA:3.10.580.10 1 150 4.9E-35 T 12-10-2018 Acife_1507 06f285b5babd96cbeef5e22fbfd2af75 151 SUPERFAMILY SSF54631 3 148 4.42E-34 T 12-10-2018 Acife_1507 06f285b5babd96cbeef5e22fbfd2af75 151 SMART SM00116 101 149 6.9E-10 T 12-10-2018 IPR000644 CBS domain Acife_1507 06f285b5babd96cbeef5e22fbfd2af75 151 SMART SM00116 11 59 5.2E-8 T 12-10-2018 IPR000644 CBS domain Acife_1507 06f285b5babd96cbeef5e22fbfd2af75 151 Pfam PF00571 CBS domain 95 149 9.1E-14 T 12-10-2018 IPR000644 CBS domain Acife_1507 06f285b5babd96cbeef5e22fbfd2af75 151 Pfam PF00571 CBS domain 5 57 1.4E-13 T 12-10-2018 IPR000644 CBS domain Acife_0072 8ef9d4f3ced37798af382d81843a64ba 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 11 463 1.7E-178 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Acife_0072 8ef9d4f3ced37798af382d81843a64ba 463 SUPERFAMILY SSF102114 9 452 1.44E-129 T 12-10-2018 Acife_0072 8ef9d4f3ced37798af382d81843a64ba 463 Pfam PF06969 HemN C-terminal domain 371 439 4.9E-12 T 12-10-2018 IPR010723 HemN, C-terminal Acife_0072 8ef9d4f3ced37798af382d81843a64ba 463 Gene3D G3DSA:1.10.10.920 372 463 1.7E-29 T 12-10-2018 Acife_0072 8ef9d4f3ced37798af382d81843a64ba 463 PIRSF PIRSF000167 6 463 2.6E-160 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Acife_0072 8ef9d4f3ced37798af382d81843a64ba 463 Pfam PF04055 Radical SAM superfamily 63 236 2.1E-15 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_0072 8ef9d4f3ced37798af382d81843a64ba 463 SMART SM00729 57 280 7.2E-46 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Acife_0072 8ef9d4f3ced37798af382d81843a64ba 463 Gene3D G3DSA:3.80.30.20 5 371 8.1E-115 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 SUPERFAMILY SSF82714 186 268 1.57E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 SUPERFAMILY SSF82693 138 325 8.11E-18 T 12-10-2018 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 SUPERFAMILY SSF82866 293 496 1.57E-39 T 12-10-2018 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 Gene3D G3DSA:3.30.70.1430 42 810 5.3E-255 T 12-10-2018 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 SUPERFAMILY SSF82693 42 127 1.67E-20 T 12-10-2018 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 SUPERFAMILY SSF82714 714 797 1.31E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 1.2E-35 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.2E-35 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.2E-35 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.2E-35 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.2E-35 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 1.2E-35 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 1.2E-35 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 1.2E-35 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 Gene3D G3DSA:3.30.70.1320 135 327 5.3E-255 T 12-10-2018 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 Gene3D G3DSA:3.30.2090.10 714 802 5.3E-255 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 SUPERFAMILY SSF82866 799 1032 1.27E-43 T 12-10-2018 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 Gene3D G3DSA:1.20.1640.10 15 504 5.3E-255 T 12-10-2018 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 Gene3D G3DSA:1.20.1640.10 505 1025 5.3E-255 T 12-10-2018 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 Gene3D G3DSA:3.30.70.1430 559 662 5.3E-255 T 12-10-2018 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 Gene3D G3DSA:3.30.70.1440 663 861 5.3E-255 T 12-10-2018 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 Gene3D G3DSA:3.30.2090.10 182 273 5.3E-255 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1032 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Acife_2147 76299f5d1de70dc3f646d6928de0c520 1036 Pfam PF00873 AcrB/AcrD/AcrF family 8 1027 4.2E-224 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2630 61fa8d592c9be05dceaba6a504e8b9b4 273 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 10 245 1.8E-87 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Acife_2630 61fa8d592c9be05dceaba6a504e8b9b4 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 219 1.4E-43 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Acife_2630 61fa8d592c9be05dceaba6a504e8b9b4 273 SUPERFAMILY SSF53790 9 253 1.83E-73 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Acife_2630 61fa8d592c9be05dceaba6a504e8b9b4 273 Gene3D G3DSA:3.40.1010.10 9 125 7.0E-41 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Acife_2630 61fa8d592c9be05dceaba6a504e8b9b4 273 Gene3D G3DSA:3.30.950.10 126 269 1.1E-41 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Acife_2630 61fa8d592c9be05dceaba6a504e8b9b4 273 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 15 29 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Acife_2630 61fa8d592c9be05dceaba6a504e8b9b4 273 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 90 123 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Acife_2486 1ece3d8adfd58871c498475c13f23ef3 509 SUPERFAMILY SSF53850 35 267 2.02E-17 T 12-10-2018 Acife_2486 1ece3d8adfd58871c498475c13f23ef3 509 Gene3D G3DSA:3.40.190.10 30 234 6.1E-30 T 12-10-2018 Acife_2486 1ece3d8adfd58871c498475c13f23ef3 509 Gene3D G3DSA:3.40.190.10 287 491 3.7E-6 T 12-10-2018 Acife_2486 1ece3d8adfd58871c498475c13f23ef3 509 Gene3D G3DSA:3.40.190.10 367 466 3.7E-6 T 12-10-2018 Acife_2486 1ece3d8adfd58871c498475c13f23ef3 509 Gene3D G3DSA:3.40.190.10 107 209 6.1E-30 T 12-10-2018 Acife_2486 1ece3d8adfd58871c498475c13f23ef3 509 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 287 494 1.7E-9 T 12-10-2018 Acife_2486 1ece3d8adfd58871c498475c13f23ef3 509 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 28 260 3.1E-38 T 12-10-2018 Acife_1343 cf42a0c2c2b271c31e2b1fb632f97c3d 246 Pfam PF00753 Metallo-beta-lactamase superfamily 15 183 6.1E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_1343 cf42a0c2c2b271c31e2b1fb632f97c3d 246 SMART SM00849 11 183 2.1E-23 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_1343 cf42a0c2c2b271c31e2b1fb632f97c3d 246 Gene3D G3DSA:3.60.15.10 2 245 5.0E-63 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_1343 cf42a0c2c2b271c31e2b1fb632f97c3d 246 SUPERFAMILY SSF56281 10 235 9.34E-43 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 Pfam PF00990 Diguanylate cyclase, GGDEF domain 779 930 2.8E-45 T 12-10-2018 IPR000160 GGDEF domain Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 Gene3D G3DSA:3.30.450.20 43 197 4.4E-9 T 12-10-2018 Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 SUPERFAMILY SSF55785 639 764 4.89E-14 T 12-10-2018 IPR035965 PAS domain superfamily Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 SUPERFAMILY SSF55781 481 639 2.14E-17 T 12-10-2018 Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 SMART SM00086 419 458 0.18 T 12-10-2018 IPR001610 PAC motif Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 SMART SM00086 725 766 0.03 T 12-10-2018 IPR001610 PAC motif Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 Pfam PF13185 GAF domain 494 636 3.6E-13 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 Gene3D G3DSA:3.30.450.20 338 455 2.7E-24 T 12-10-2018 Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 SUPERFAMILY SSF55785 349 458 7.68E-18 T 12-10-2018 IPR035965 PAS domain superfamily Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 SUPERFAMILY SSF55073 782 930 7.85E-47 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 SMART SM00052 952 1196 8.7E-62 T 12-10-2018 IPR001633 EAL domain Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 Gene3D G3DSA:3.30.450.40 464 650 2.9E-18 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 Pfam PF13426 PAS domain 671 765 7.3E-8 T 12-10-2018 IPR000014 PAS domain Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 Pfam PF13426 PAS domain 368 457 3.2E-6 T 12-10-2018 IPR000014 PAS domain Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 Pfam PF00563 EAL domain 958 1191 2.5E-56 T 12-10-2018 IPR001633 EAL domain Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 Gene3D G3DSA:3.20.20.450 955 1206 3.3E-69 T 12-10-2018 IPR035919 EAL domain superfamily Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 SUPERFAMILY SSF141868 958 1203 3.66E-61 T 12-10-2018 IPR035919 EAL domain superfamily Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 SMART SM00267 766 942 4.0E-55 T 12-10-2018 IPR000160 GGDEF domain Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 343 463 1.3E-15 T 12-10-2018 IPR000014 PAS domain Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 671 769 2.3E-9 T 12-10-2018 IPR000014 PAS domain Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 Gene3D G3DSA:3.30.70.270 771 935 2.0E-54 T 12-10-2018 Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 Gene3D G3DSA:3.30.450.20 653 769 3.1E-18 T 12-10-2018 Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 SMART SM00091 346 417 0.12 T 12-10-2018 IPR000014 PAS domain Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 SMART SM00091 650 719 8.1E-4 T 12-10-2018 IPR000014 PAS domain Acife_1579 8bcb9396e1dbec1422db57bdee0f96bf 1332 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 773 930 6.9E-42 T 12-10-2018 IPR000160 GGDEF domain Acife_2718 7275351a4d2e905c2805c7c8fd923030 128 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 64 128 9.0E-22 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2718 7275351a4d2e905c2805c7c8fd923030 128 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 128 4.8E-47 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2718 7275351a4d2e905c2805c7c8fd923030 128 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 6 50 8.3E-19 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2718 7275351a4d2e905c2805c7c8fd923030 128 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 62 128 6.9E-30 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2718 7275351a4d2e905c2805c7c8fd923030 128 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 128 24.65 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2718 7275351a4d2e905c2805c7c8fd923030 128 SUPERFAMILY SSF48300 5 64 4.97E-16 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2718 7275351a4d2e905c2805c7c8fd923030 128 Gene3D G3DSA:1.20.5.710 3 57 2.6E-19 T 12-10-2018 Acife_2718 7275351a4d2e905c2805c7c8fd923030 128 SUPERFAMILY SSF54736 57 128 9.59E-24 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Acife_2718 7275351a4d2e905c2805c7c8fd923030 128 Gene3D G3DSA:3.30.1390.10 58 128 1.3E-29 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Acife_0057 083719c00b6abae951d73a22c405ea10 114 SUPERFAMILY SSF117782 7 114 6.41E-30 T 12-10-2018 IPR035439 UPF0145 domain superfamily Acife_0057 083719c00b6abae951d73a22c405ea10 114 Pfam PF01906 Putative heavy-metal-binding 7 113 9.1E-31 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 Acife_0057 083719c00b6abae951d73a22c405ea10 114 Gene3D G3DSA:3.30.110.70 9 114 3.9E-27 T 12-10-2018 Acife_0057 083719c00b6abae951d73a22c405ea10 114 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 7 113 21.08 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 SMART SM00729 142 367 9.2E-52 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 Gene3D G3DSA:2.40.50.140 382 446 6.1E-14 T 12-10-2018 Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 10 441 6.6E-101 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 Gene3D G3DSA:3.40.50.12160 10 129 1.9E-27 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 Pfam PF00919 Uncharacterized protein family UPF0004 10 96 1.4E-20 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 10 441 6.5E-159 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 Pfam PF04055 Radical SAM superfamily 148 325 8.9E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 Gene3D G3DSA:3.80.30.20 141 381 2.1E-70 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 9 443 59.71 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 SUPERFAMILY SSF102114 123 372 1.7E-49 T 12-10-2018 Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 146 166 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Acife_0032 6e8ecb4afebb644c54c6f1abae2e056d 446 Pfam PF01938 TRAM domain 378 444 4.3E-6 T 12-10-2018 IPR002792 TRAM domain Acife_0628 30cd21d551d6b582e6ab05523f9b05a9 387 SUPERFAMILY SSF56059 1 237 2.6E-72 T 12-10-2018 Acife_0628 30cd21d551d6b582e6ab05523f9b05a9 387 Gene3D G3DSA:3.30.470.20 1 232 2.8E-86 T 12-10-2018 Acife_0628 30cd21d551d6b582e6ab05523f9b05a9 387 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.0E-153 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Acife_0628 30cd21d551d6b582e6ab05523f9b05a9 387 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Acife_0628 30cd21d551d6b582e6ab05523f9b05a9 387 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.902 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Acife_0628 30cd21d551d6b582e6ab05523f9b05a9 387 Pfam PF08442 ATP-grasp domain 2 202 4.1E-73 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Acife_0628 30cd21d551d6b582e6ab05523f9b05a9 387 PIRSF PIRSF001554 1 387 2.0E-145 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Acife_0628 30cd21d551d6b582e6ab05523f9b05a9 387 SUPERFAMILY SSF52210 240 385 4.71E-51 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Acife_0628 30cd21d551d6b582e6ab05523f9b05a9 387 Gene3D G3DSA:3.30.1490.20 21 104 2.8E-86 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Acife_0628 30cd21d551d6b582e6ab05523f9b05a9 387 Pfam PF00549 CoA-ligase 262 382 3.6E-24 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Acife_0628 30cd21d551d6b582e6ab05523f9b05a9 387 Gene3D G3DSA:3.40.50.261 240 387 3.4E-55 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Acife_0008 a8923c1481c5436ffb8baa6c5285a85b 269 SUPERFAMILY SSF52540 2 267 2.35E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0008 a8923c1481c5436ffb8baa6c5285a85b 269 Gene3D G3DSA:3.40.50.300 1 259 7.1E-73 T 12-10-2018 Acife_0008 a8923c1481c5436ffb8baa6c5285a85b 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 4.7E-107 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Acife_0008 a8923c1481c5436ffb8baa6c5285a85b 269 PIRSF PIRSF003092 1 269 1.2E-89 T 12-10-2018 IPR025501 ATP binding protein MinD Acife_0008 a8923c1481c5436ffb8baa6c5285a85b 269 Pfam PF13614 AAA domain 3 156 2.5E-21 T 12-10-2018 IPR025669 AAA domain Acife_2883 3ccb3713a2de608b765824f5cdb2314b 209 PIRSF PIRSF004649 1 207 8.0E-45 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Acife_2883 3ccb3713a2de608b765824f5cdb2314b 209 Pfam PF05494 MlaC protein 34 196 1.5E-46 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Acife_2883 3ccb3713a2de608b765824f5cdb2314b 209 Gene3D G3DSA:3.10.450.710 25 199 2.3E-42 T 12-10-2018 Acife_2398 3bbcfb4cb972dd5c6fc84fd9af52004f 335 SUPERFAMILY SSF53335 163 321 1.06E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2398 3bbcfb4cb972dd5c6fc84fd9af52004f 335 Pfam PF13649 Methyltransferase domain 170 265 1.5E-15 T 12-10-2018 Acife_2398 3bbcfb4cb972dd5c6fc84fd9af52004f 335 Gene3D G3DSA:3.40.50.150 146 325 6.0E-33 T 12-10-2018 Acife_1132 323f9630f33c5609f98f2cc2988aac72 558 SUPERFAMILY SSF52016 377 556 1.1E-59 T 12-10-2018 Acife_1132 323f9630f33c5609f98f2cc2988aac72 558 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 557 3.0E-229 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1132 323f9630f33c5609f98f2cc2988aac72 558 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1132 323f9630f33c5609f98f2cc2988aac72 558 Pfam PF00920 Dehydratase family 31 554 5.3E-214 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1132 323f9630f33c5609f98f2cc2988aac72 558 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1132 323f9630f33c5609f98f2cc2988aac72 558 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 557 44.691 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1132 323f9630f33c5609f98f2cc2988aac72 558 Gene3D G3DSA:3.50.30.80 377 528 1.7E-53 T 12-10-2018 Acife_1132 323f9630f33c5609f98f2cc2988aac72 558 SUPERFAMILY SSF143975 1 376 5.62E-125 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1728 0f912cb1b5e72c63cf3827bda8235427 155 Gene3D G3DSA:1.20.1260.100 3 155 3.1E-42 T 12-10-2018 IPR038330 TspO/MBR-related superfamily Acife_1728 0f912cb1b5e72c63cf3827bda8235427 155 Pfam PF03073 TspO/MBR family 13 152 5.4E-40 T 12-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 Acife_1728 0f912cb1b5e72c63cf3827bda8235427 155 PIRSF PIRSF005859 2 155 4.7E-40 T 12-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 Acife_2410 80e1421830dda45452312bfe267c4285 291 SUPERFAMILY SSF51569 1 288 2.09E-97 T 12-10-2018 Acife_2410 80e1421830dda45452312bfe267c4285 291 Gene3D G3DSA:3.20.20.70 1 291 1.6E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2410 80e1421830dda45452312bfe267c4285 291 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 286 5.7E-106 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_2410 80e1421830dda45452312bfe267c4285 291 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Acife_2410 80e1421830dda45452312bfe267c4285 291 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_2410 80e1421830dda45452312bfe267c4285 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 5.9E-33 T 12-10-2018 IPR002220 DapA-like GO:0016829 Acife_2410 80e1421830dda45452312bfe267c4285 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 5.9E-33 T 12-10-2018 IPR002220 DapA-like GO:0016829 Acife_2410 80e1421830dda45452312bfe267c4285 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 5.9E-33 T 12-10-2018 IPR002220 DapA-like GO:0016829 Acife_2410 80e1421830dda45452312bfe267c4285 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 5.9E-33 T 12-10-2018 IPR002220 DapA-like GO:0016829 Acife_2410 80e1421830dda45452312bfe267c4285 291 SMART SM01130 1 289 4.4E-134 T 12-10-2018 IPR002220 DapA-like GO:0016829 Acife_2410 80e1421830dda45452312bfe267c4285 291 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 3.1E-96 T 12-10-2018 IPR002220 DapA-like GO:0016829 Acife_2410 80e1421830dda45452312bfe267c4285 291 PIRSF PIRSF001365 1 290 9.9E-90 T 12-10-2018 IPR002220 DapA-like GO:0016829 Acife_2410 80e1421830dda45452312bfe267c4285 291 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 64.63 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_3120 9c16a0bcbc0c8a8928abefaa8c5fd104 229 Pfam PF13280 WYL domain 138 226 5.5E-15 T 12-10-2018 IPR026881 WYL domain Acife_3120 9c16a0bcbc0c8a8928abefaa8c5fd104 229 SUPERFAMILY SSF46785 3 62 1.21E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_3120 9c16a0bcbc0c8a8928abefaa8c5fd104 229 Gene3D G3DSA:1.10.10.10 1 64 3.0E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_3120 9c16a0bcbc0c8a8928abefaa8c5fd104 229 Pfam PF08279 HTH domain 6 59 3.0E-17 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 136 3.5E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 SUPERFAMILY SSF50447 151 299 4.12E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.2E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.2E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.2E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.2E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.2E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 SUPERFAMILY SSF54980 303 388 3.98E-14 T 12-10-2018 IPR035647 EF-G domain III/V-like Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 Gene3D G3DSA:2.40.30.10 200 300 7.9E-31 T 12-10-2018 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 SMART SM00838 396 484 0.0053 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 Gene3D G3DSA:3.30.70.240 390 482 2.1E-129 T 12-10-2018 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 SUPERFAMILY SSF54980 399 513 2.35E-29 T 12-10-2018 IPR035647 EF-G domain III/V-like Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 Pfam PF00679 Elongation factor G C-terminus 398 480 7.2E-23 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 SUPERFAMILY SSF52540 3 207 1.62E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 Pfam PF03144 Elongation factor Tu domain 2 219 289 2.1E-10 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 Gene3D G3DSA:3.40.50.300 2 198 2.4E-64 T 12-10-2018 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 8.7E-288 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 2.7E-55 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 Gene3D G3DSA:3.30.70.870 307 590 2.1E-129 T 12-10-2018 Acife_0568 01804b69f5c9cca4d8af94954c3f436c 605 Gene3D G3DSA:2.40.50.250 483 599 2.1E-129 T 12-10-2018 Acife_0938 efd7424ef2e61353edd9adca31b9a944 173 Gene3D G3DSA:3.90.80.10 1 173 1.1E-68 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Acife_0938 efd7424ef2e61353edd9adca31b9a944 173 SUPERFAMILY SSF50324 4 172 1.57E-66 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Acife_0938 efd7424ef2e61353edd9adca31b9a944 173 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 173 37.046 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Acife_0938 efd7424ef2e61353edd9adca31b9a944 173 Pfam PF00719 Inorganic pyrophosphatase 18 172 7.5E-56 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Acife_0729 d1bbbbdcef096e5aae33be30c2407576 317 Pfam PF14022 Protein of unknown function (DUF4238) 10 301 1.2E-31 T 12-10-2018 IPR025332 Protein of unknown function DUF4238 Acife_1603 028064857de391e7665b417663b1fd90 1150 Gene3D G3DSA:3.40.50.300 924 1149 1.5E-45 T 12-10-2018 Acife_1603 028064857de391e7665b417663b1fd90 1150 SUPERFAMILY SSF90257 657 771 2.01E-6 T 12-10-2018 Acife_1603 028064857de391e7665b417663b1fd90 1150 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1135 2.6E-304 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Acife_1603 028064857de391e7665b417663b1fd90 1150 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1137 20.552 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Acife_1603 028064857de391e7665b417663b1fd90 1150 Gene3D G3DSA:3.40.50.300 1 272 3.4E-46 T 12-10-2018 Acife_1603 028064857de391e7665b417663b1fd90 1150 PIRSF PIRSF005719 1 554 2.4E-109 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein Acife_1603 028064857de391e7665b417663b1fd90 1150 PIRSF PIRSF005719 584 1144 4.7E-113 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein Acife_1603 028064857de391e7665b417663b1fd90 1150 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1128 3.7E-64 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Acife_1603 028064857de391e7665b417663b1fd90 1150 SUPERFAMILY SSF52540 1 1133 3.71E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1527 ff5cda7ff151e555d4e180aa2603d0ec 238 Gene3D G3DSA:1.20.950.20 4 189 2.6E-28 T 12-10-2018 Acife_1527 ff5cda7ff151e555d4e180aa2603d0ec 238 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 162 184 5.0E-5 T 12-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Acife_1527 ff5cda7ff151e555d4e180aa2603d0ec 238 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 193 206 5.0E-5 T 12-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Acife_1527 ff5cda7ff151e555d4e180aa2603d0ec 238 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 18 41 5.0E-5 T 12-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Acife_1527 ff5cda7ff151e555d4e180aa2603d0ec 238 SUPERFAMILY SSF81342 12 209 2.12E-30 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Acife_1527 ff5cda7ff151e555d4e180aa2603d0ec 238 Pfam PF01292 Prokaryotic cytochrome b561 16 201 4.4E-24 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Acife_2312 be5baaade75d684c578020b0bb7d5723 376 Pfam PF15610 PRTase ComF-like 97 357 6.7E-73 T 12-10-2018 IPR028944 PRTase ComF-like Acife_2702 c7c4114d1b108e587040f2dc2b4ebd3a 65 SUPERFAMILY SSF46561 1 61 4.71E-17 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2702 c7c4114d1b108e587040f2dc2b4ebd3a 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 7 58 2.8E-15 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2702 c7c4114d1b108e587040f2dc2b4ebd3a 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.061 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2702 c7c4114d1b108e587040f2dc2b4ebd3a 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2702 c7c4114d1b108e587040f2dc2b4ebd3a 65 Pfam PF00831 Ribosomal L29 protein 5 58 8.9E-17 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2702 c7c4114d1b108e587040f2dc2b4ebd3a 65 Gene3D G3DSA:1.10.287.310 1 63 2.7E-20 T 12-10-2018 Acife_3162 6b1cb4d50288f851c99132697474cea3 352 PIRSF PIRSF012641 1 352 6.6E-134 T 12-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase Acife_3162 6b1cb4d50288f851c99132697474cea3 352 Pfam PF15887 Putative zinc-binding metallo-peptidase 100 345 6.5E-105 T 12-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase Acife_3162 6b1cb4d50288f851c99132697474cea3 352 Pfam PF10005 zinc-ribbon domain 4 96 1.2E-24 T 12-10-2018 IPR011201 Zinc-ribbon domain, bacteria Acife_0631 0ddfe6ea77e7532d2b74a98b659e557c 549 PIRSF PIRSF006630 1 539 4.1E-195 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Acife_0631 0ddfe6ea77e7532d2b74a98b659e557c 549 Pfam PF02540 NAD synthase 267 512 1.9E-71 T 12-10-2018 IPR022310 NAD/GMP synthase Acife_0631 0ddfe6ea77e7532d2b74a98b659e557c 549 Gene3D G3DSA:3.60.110.10 1 263 6.3E-92 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Acife_0631 0ddfe6ea77e7532d2b74a98b659e557c 549 SUPERFAMILY SSF56317 1 243 3.27E-59 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Acife_0631 0ddfe6ea77e7532d2b74a98b659e557c 549 Pfam PF00795 Carbon-nitrogen hydrolase 2 240 1.7E-26 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Acife_0631 0ddfe6ea77e7532d2b74a98b659e557c 549 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 1 537 29.268 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Acife_0631 0ddfe6ea77e7532d2b74a98b659e557c 549 Gene3D G3DSA:3.40.50.620 264 539 1.5E-113 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_0631 0ddfe6ea77e7532d2b74a98b659e557c 549 SUPERFAMILY SSF52402 259 519 1.09E-72 T 12-10-2018 Acife_0631 0ddfe6ea77e7532d2b74a98b659e557c 549 TIGRFAM TIGR00552 nadE: NAD+ synthetase 271 514 1.3E-59 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Acife_1384 7f071b0d5eef8468496c39788cb87b74 362 Pfam PF04173 TQO small subunit DoxD 28 186 4.4E-25 T 12-10-2018 IPR007301 TQO small subunit DoxD KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 Acife_1384 7f071b0d5eef8468496c39788cb87b74 362 Pfam PF07680 TQO small subunit DoxA 245 354 1.3E-9 T 12-10-2018 IPR011636 Thiosulphate:quinone oxidoreductase small subunit DoxA KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 Acife_1384 7f071b0d5eef8468496c39788cb87b74 362 PIRSF PIRSF037390 9 361 4.0E-108 T 12-10-2018 IPR017192 Thiosulphate:quinone oxidoreductase, fused subunit DoxA/ DoxD Acife_0081 afe2fd437f44cb9ef587e7e2cd2f0080 291 Gene3D G3DSA:3.40.1010.10 2 121 1.1E-36 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Acife_0081 afe2fd437f44cb9ef587e7e2cd2f0080 291 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 15 282 7.4E-69 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Acife_0081 afe2fd437f44cb9ef587e7e2cd2f0080 291 PIRSF PIRSF005917 3 287 5.5E-89 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Acife_0081 afe2fd437f44cb9ef587e7e2cd2f0080 291 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 92 103 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Acife_0081 afe2fd437f44cb9ef587e7e2cd2f0080 291 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 14 235 33.737 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Acife_0081 afe2fd437f44cb9ef587e7e2cd2f0080 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 212 4.7E-27 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Acife_0081 afe2fd437f44cb9ef587e7e2cd2f0080 291 Gene3D G3DSA:3.30.950.10 122 242 1.9E-38 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Acife_0081 afe2fd437f44cb9ef587e7e2cd2f0080 291 SUPERFAMILY SSF53790 13 233 4.19E-72 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 Gene3D G3DSA:3.30.420.40 194 365 1.0E-109 T 12-10-2018 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 SUPERFAMILY SSF100934 507 618 1.57E-26 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 SUPERFAMILY SSF53067 19 197 4.7E-51 T 12-10-2018 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 SUPERFAMILY SSF100920 386 537 7.46E-48 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 Gene3D G3DSA:3.30.420.40 22 378 1.0E-109 T 12-10-2018 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 Gene3D G3DSA:3.90.640.10 238 315 1.0E-109 T 12-10-2018 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 Pfam PF00012 Hsp70 protein 21 603 8.6E-172 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.6E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.6E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.6E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.6E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.6E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.6E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.6E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.6E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 618 1.3E-272 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 Gene3D G3DSA:2.60.34.10 383 522 3.1E-47 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 619 41.254 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 Gene3D G3DSA:1.20.1270.10 523 618 4.0E-21 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Acife_1103 126e3490da126efcdeca0315ecac0d84 621 SUPERFAMILY SSF53067 200 380 2.72E-49 T 12-10-2018 Acife_0039 504fb29b9957012e73154d752103bcf7 84 Gene3D G3DSA:3.30.2310.20 1 84 1.8E-37 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_0039 504fb29b9957012e73154d752103bcf7 84 SUPERFAMILY SSF143011 3 83 1.96E-26 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_0039 504fb29b9957012e73154d752103bcf7 84 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 1.4E-38 T 12-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Acife_0039 504fb29b9957012e73154d752103bcf7 84 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 9.9E-34 T 12-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Acife_1510 b43f7d0f94d64e3f577d70c74379ea9f 308 SUPERFAMILY SSF52540 5 154 7.03E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1510 b43f7d0f94d64e3f577d70c74379ea9f 308 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 4 288 2.3E-83 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Acife_1510 b43f7d0f94d64e3f577d70c74379ea9f 308 SUPERFAMILY SSF52540 5 260 2.66E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1510 b43f7d0f94d64e3f577d70c74379ea9f 308 Pfam PF01715 IPP transferase 38 279 2.6E-74 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Acife_1510 b43f7d0f94d64e3f577d70c74379ea9f 308 Gene3D G3DSA:1.10.20.140 111 181 2.1E-88 T 12-10-2018 Acife_1510 b43f7d0f94d64e3f577d70c74379ea9f 308 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 297 28.354 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Acife_1510 b43f7d0f94d64e3f577d70c74379ea9f 308 Gene3D G3DSA:3.40.50.300 8 280 2.1E-88 T 12-10-2018 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 Pfam PF02503 Polyphosphate kinase middle domain 137 336 8.0E-57 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 SUPERFAMILY SSF56024 517 695 3.59E-63 T 12-10-2018 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 Hamap MF_00347 Polyphosphate kinase [ppk]. 19 696 27.168 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 Pfam PF13090 Polyphosphate kinase C-terminal domain 346 687 1.1E-142 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 SUPERFAMILY SSF56024 330 509 5.02E-59 T 12-10-2018 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 Gene3D G3DSA:3.30.870.10 521 698 4.2E-60 T 12-10-2018 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 SUPERFAMILY SSF143724 125 329 4.71E-59 T 12-10-2018 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 SUPERFAMILY SSF140356 18 123 1.57E-32 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 22 690 5.7E-267 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 PIRSF PIRSF015589 2 701 1.8E-271 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 Gene3D G3DSA:3.30.870.10 334 517 7.7E-69 T 12-10-2018 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 Gene3D G3DSA:3.30.1840.10 16 325 9.3E-96 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Acife_1413 4c9ba78de016a3341ea44eb62898689c 701 Pfam PF13089 Polyphosphate kinase N-terminal domain 22 127 4.6E-32 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Acife_1459 68968d814b86feda8d00dd02a2a9f699 519 Pfam PF13247 4Fe-4S dicluster domain 175 270 1.2E-36 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_1459 68968d814b86feda8d00dd02a2a9f699 519 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 490 2.3E-247 T 12-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Acife_1459 68968d814b86feda8d00dd02a2a9f699 519 Gene3D G3DSA:3.30.70.20 1 299 2.0E-98 T 12-10-2018 Acife_1459 68968d814b86feda8d00dd02a2a9f699 519 SUPERFAMILY SSF54862 2 490 1.99E-157 T 12-10-2018 Acife_1459 68968d814b86feda8d00dd02a2a9f699 519 Gene3D G3DSA:1.10.3650.10 358 436 1.7E-21 T 12-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Acife_1459 68968d814b86feda8d00dd02a2a9f699 519 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 438 3.5E-24 T 12-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Acife_1122 5e7a69f0728fa773b1932b595bab61cd 251 Gene3D G3DSA:3.40.50.720 5 251 5.8E-91 T 12-10-2018 Acife_1122 5e7a69f0728fa773b1932b595bab61cd 251 Pfam PF00899 ThiF family 13 247 5.5E-66 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Acife_1122 5e7a69f0728fa773b1932b595bab61cd 251 SUPERFAMILY SSF69572 5 250 1.57E-80 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Acife_2103 5be6d35839900f19b30400e787c60a1b 152 Pfam PF05239 PRC-barrel domain 34 107 8.6E-17 T 12-10-2018 IPR027275 PRC-barrel domain Acife_2103 5be6d35839900f19b30400e787c60a1b 152 Gene3D G3DSA:2.30.30.240 22 113 2.8E-26 T 12-10-2018 Acife_2103 5be6d35839900f19b30400e787c60a1b 152 SUPERFAMILY SSF50346 19 146 5.1E-25 T 12-10-2018 IPR011033 PRC-barrel-like superfamily Acife_2162 ad77c61cf5ecd6f5152cdd37385104f1 785 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 300 766 2.6E-159 T 12-10-2018 IPR013355 Type IV pilus secretin PilQ Acife_2162 ad77c61cf5ecd6f5152cdd37385104f1 785 Pfam PF03958 Bacterial type II/III secretion system short domain 398 500 3.4E-16 T 12-10-2018 IPR005644 NolW-like Acife_2162 ad77c61cf5ecd6f5152cdd37385104f1 785 Gene3D G3DSA:2.60.40.3470 163 291 8.7E-23 T 12-10-2018 Acife_2162 ad77c61cf5ecd6f5152cdd37385104f1 785 Gene3D G3DSA:3.55.50.30 300 370 8.6E-7 T 12-10-2018 Acife_2162 ad77c61cf5ecd6f5152cdd37385104f1 785 SMART SM00965 325 373 2.0E-5 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Acife_2162 ad77c61cf5ecd6f5152cdd37385104f1 785 PRINTS PR00811 Bacterial general secretion pathway protein D signature 754 768 9.2E-20 T 12-10-2018 IPR001775 GspD/PilQ family Acife_2162 ad77c61cf5ecd6f5152cdd37385104f1 785 PRINTS PR00811 Bacterial general secretion pathway protein D signature 606 630 9.2E-20 T 12-10-2018 IPR001775 GspD/PilQ family Acife_2162 ad77c61cf5ecd6f5152cdd37385104f1 785 PRINTS PR00811 Bacterial general secretion pathway protein D signature 500 510 9.2E-20 T 12-10-2018 IPR001775 GspD/PilQ family Acife_2162 ad77c61cf5ecd6f5152cdd37385104f1 785 PRINTS PR00811 Bacterial general secretion pathway protein D signature 731 749 9.2E-20 T 12-10-2018 IPR001775 GspD/PilQ family Acife_2162 ad77c61cf5ecd6f5152cdd37385104f1 785 Pfam PF00263 Bacterial type II and III secretion system protein 610 766 2.5E-52 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 Acife_2131 a2b4baa57dd344f1f36524f23c41baf7 220 SMART SM00862 145 216 9.6E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_2131 a2b4baa57dd344f1f36524f23c41baf7 220 SUPERFAMILY SSF52172 1 174 1.99E-38 T 12-10-2018 IPR011006 CheY-like superfamily Acife_2131 a2b4baa57dd344f1f36524f23c41baf7 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 215 4.1E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_2131 a2b4baa57dd344f1f36524f23c41baf7 220 Gene3D G3DSA:1.10.10.10 122 219 2.8E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2131 a2b4baa57dd344f1f36524f23c41baf7 220 Gene3D G3DSA:3.40.50.2300 1 121 1.8E-38 T 12-10-2018 Acife_2131 a2b4baa57dd344f1f36524f23c41baf7 220 SMART SM00448 1 112 6.9E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_2131 a2b4baa57dd344f1f36524f23c41baf7 220 Pfam PF00072 Response regulator receiver domain 3 112 1.1E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1480 b66617085126431aa702cefe5ad128c6 123 PIRSF PIRSF039020 1 122 1.1E-47 T 12-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR Acife_1480 b66617085126431aa702cefe5ad128c6 123 Gene3D G3DSA:3.30.720.120 1 54 7.3E-25 T 12-10-2018 Acife_1480 b66617085126431aa702cefe5ad128c6 123 SUPERFAMILY SSF54593 4 121 4.37E-21 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_1480 b66617085126431aa702cefe5ad128c6 123 Gene3D G3DSA:3.30.720.110 66 120 3.9E-25 T 12-10-2018 Acife_1480 b66617085126431aa702cefe5ad128c6 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 115 1.6E-7 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Acife_3119 b66617085126431aa702cefe5ad128c6 123 PIRSF PIRSF039020 1 122 1.1E-47 T 12-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR Acife_3119 b66617085126431aa702cefe5ad128c6 123 Gene3D G3DSA:3.30.720.120 1 54 7.3E-25 T 12-10-2018 Acife_3119 b66617085126431aa702cefe5ad128c6 123 SUPERFAMILY SSF54593 4 121 4.37E-21 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_3119 b66617085126431aa702cefe5ad128c6 123 Gene3D G3DSA:3.30.720.110 66 120 3.9E-25 T 12-10-2018 Acife_3119 b66617085126431aa702cefe5ad128c6 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 115 1.6E-7 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Acife_1283 65ea34fa02d74b54c429c384a91ef7af 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 474 38.379 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Acife_1283 65ea34fa02d74b54c429c384a91ef7af 476 Gene3D G3DSA:1.10.10.410 413 476 1.9E-25 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Acife_1283 65ea34fa02d74b54c429c384a91ef7af 476 SUPERFAMILY SSF89095 296 399 1.57E-31 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Acife_1283 65ea34fa02d74b54c429c384a91ef7af 476 SUPERFAMILY SSF55931 4 295 1.11E-118 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Acife_1283 65ea34fa02d74b54c429c384a91ef7af 476 SMART SM00845 327 473 1.1E-74 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Acife_1283 65ea34fa02d74b54c429c384a91ef7af 476 Pfam PF02934 GatB/GatE catalytic domain 5 288 3.3E-112 T 12-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Acife_1283 65ea34fa02d74b54c429c384a91ef7af 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 144 158 - T 12-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Acife_1283 65ea34fa02d74b54c429c384a91ef7af 476 Gene3D G3DSA:1.10.150.380 296 412 1.0E-34 T 12-10-2018 Acife_1283 65ea34fa02d74b54c429c384a91ef7af 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 473 1.4E-176 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Acife_1283 65ea34fa02d74b54c429c384a91ef7af 476 Pfam PF02637 GatB domain 327 473 1.8E-49 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Acife_2960 e8e7650b4c1b8e9c150fa1c9828372e9 78 SMART SM00966 6 49 1.2E-4 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_2960 e8e7650b4c1b8e9c150fa1c9828372e9 78 SUPERFAMILY SSF89447 1 59 6.28E-11 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_2960 e8e7650b4c1b8e9c150fa1c9828372e9 78 Gene3D G3DSA:2.10.260.10 1 76 1.2E-7 T 12-10-2018 Acife_2292 8551f35b451eac416bad3ed2158f5277 754 SUPERFAMILY SSF50692 636 750 4.52E-16 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Acife_2292 8551f35b451eac416bad3ed2158f5277 754 Gene3D G3DSA:3.40.228.10 181 393 4.0E-73 T 12-10-2018 Acife_2292 8551f35b451eac416bad3ed2158f5277 754 PIRSF PIRSF000144 1 752 0.0 T 12-10-2018 Acife_2292 8551f35b451eac416bad3ed2158f5277 754 Pfam PF01568 Molydopterin dinucleotide binding domain 637 741 9.3E-9 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Acife_2292 8551f35b451eac416bad3ed2158f5277 754 Gene3D G3DSA:3.40.50.740 121 551 4.0E-73 T 12-10-2018 Acife_2292 8551f35b451eac416bad3ed2158f5277 754 SUPERFAMILY SSF53706 47 620 2.49E-144 T 12-10-2018 Acife_2292 8551f35b451eac416bad3ed2158f5277 754 Pfam PF00384 Molybdopterin oxidoreductase 109 551 1.4E-31 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2292 8551f35b451eac416bad3ed2158f5277 754 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 13 748 3.8E-282 T 12-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 PIRSF PIRSF002133 1 123 9.4E-55 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.3E-70 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.9E-61 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.9E-61 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.9E-61 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.9E-61 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.9E-61 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.9E-61 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 SUPERFAMILY SSF50249 2 123 3.17E-53 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 Gene3D G3DSA:2.40.50.140 1 123 1.4E-64 T 12-10-2018 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 41.114 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2715 d8215b2cc5002d973604fea04c832e2a 123 Pfam PF00164 Ribosomal protein S12/S23 13 123 1.3E-43 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 Gene3D G3DSA:3.30.300.10 12 273 4.5E-175 T 12-10-2018 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 Gene3D G3DSA:3.30.300.10 103 378 4.5E-175 T 12-10-2018 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 SUPERFAMILY SSF55973 236 387 1.06E-67 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 384 3.8E-181 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 375 1.5E-66 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 SUPERFAMILY SSF55973 4 111 3.41E-46 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 SUPERFAMILY SSF55973 117 235 1.53E-50 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 234 7.8E-45 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 7.2E-42 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 Gene3D G3DSA:3.30.300.10 6 236 4.5E-175 T 12-10-2018 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.06 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 PIRSF PIRSF000497 1 386 6.3E-169 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Acife_0970 b6a812bd1d72a0f5ea8674561e7ae770 389 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Acife_1799 b568510707fa1056b5b16140f3594581 511 Gene3D G3DSA:2.60.40.10 415 511 1.5E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold Acife_1799 b568510707fa1056b5b16140f3594581 511 SUPERFAMILY SSF81296 406 507 7.14E-16 T 12-10-2018 IPR014756 Immunoglobulin E-set Acife_1799 b568510707fa1056b5b16140f3594581 511 Gene3D G3DSA:2.70.98.10 34 405 5.5E-135 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Acife_1799 b568510707fa1056b5b16140f3594581 511 PIRSF PIRSF006281 3 510 5.0E-150 T 12-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD Acife_1799 b568510707fa1056b5b16140f3594581 511 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 35 505 2.6E-156 T 12-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 Acife_1799 b568510707fa1056b5b16140f3594581 511 SUPERFAMILY SSF74650 35 400 8.47E-126 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Acife_1435 09c27b12253192a7122eed1ea72ce7df 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 44 66 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Acife_1435 09c27b12253192a7122eed1ea72ce7df 182 Gene3D G3DSA:1.20.120.1760 3 167 7.9E-12 T 12-10-2018 Acife_1435 09c27b12253192a7122eed1ea72ce7df 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 66 1.5E-17 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Acife_1435 09c27b12253192a7122eed1ea72ce7df 182 PIRSF PIRSF000847 1 180 5.0E-45 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Acife_2589 83a1c345b92d3f1f4e3af2294dc4313a 174 Gene3D G3DSA:3.40.250.10 13 163 1.5E-16 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_2589 83a1c345b92d3f1f4e3af2294dc4313a 174 Pfam PF00581 Rhodanese-like domain 46 158 4.8E-9 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_2589 83a1c345b92d3f1f4e3af2294dc4313a 174 SMART SM00450 35 162 3.0E-13 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_2589 83a1c345b92d3f1f4e3af2294dc4313a 174 SUPERFAMILY SSF52821 29 159 5.5E-17 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_2015 7f182dcba5ac490c1fde1e511755c182 319 SUPERFAMILY SSF53613 12 299 1.12E-57 T 12-10-2018 IPR029056 Ribokinase-like Acife_2015 7f182dcba5ac490c1fde1e511755c182 319 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 255 268 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Acife_2015 7f182dcba5ac490c1fde1e511755c182 319 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 11 311 7.6E-85 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Acife_2015 7f182dcba5ac490c1fde1e511755c182 319 Gene3D G3DSA:3.40.1190.20 10 317 7.3E-84 T 12-10-2018 IPR029056 Ribokinase-like Acife_2015 7f182dcba5ac490c1fde1e511755c182 319 PIRSF PIRSF000535 9 316 1.5E-74 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Acife_2015 7f182dcba5ac490c1fde1e511755c182 319 Pfam PF00294 pfkB family carbohydrate kinase 27 298 1.0E-40 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 Gene3D G3DSA:1.20.1640.10 10 503 8.2E-261 T 12-10-2018 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 SUPERFAMILY SSF82714 188 271 1.7E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 SUPERFAMILY SSF82693 137 327 4.62E-19 T 12-10-2018 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 Gene3D G3DSA:3.30.2090.10 711 799 8.2E-261 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 Gene3D G3DSA:3.30.70.1320 134 329 8.2E-261 T 12-10-2018 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 Gene3D G3DSA:3.30.70.1430 40 807 8.2E-261 T 12-10-2018 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 Gene3D G3DSA:1.20.1640.10 504 1013 8.2E-261 T 12-10-2018 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 Gene3D G3DSA:3.30.70.1430 562 660 8.2E-261 T 12-10-2018 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 SUPERFAMILY SSF82714 713 793 8.24E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 Gene3D G3DSA:3.30.70.1440 661 857 8.2E-261 T 12-10-2018 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 SUPERFAMILY SSF82693 43 133 2.88E-23 T 12-10-2018 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 SUPERFAMILY SSF82866 796 1021 4.58E-39 T 12-10-2018 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 8.3E-61 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 8.3E-61 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.3E-61 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.3E-61 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 8.3E-61 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 8.3E-61 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 8.3E-61 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 8.3E-61 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 Gene3D G3DSA:3.30.2090.10 186 276 8.2E-261 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 SUPERFAMILY SSF82693 559 660 1.31E-7 T 12-10-2018 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 Pfam PF00873 AcrB/AcrD/AcrF family 5 1015 9.5E-241 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_0050 595583ff517fa5f0d84646e8a0626b58 1028 SUPERFAMILY SSF82866 295 495 2.09E-46 T 12-10-2018 Acife_1433 a72821f4f27f2a6b44c8717638c0ca39 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 45.05 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_1433 a72821f4f27f2a6b44c8717638c0ca39 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 339 9.2E-33 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Acife_1433 a72821f4f27f2a6b44c8717638c0ca39 345 Gene3D G3DSA:3.30.1330.10 7 170 8.9E-69 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Acife_1433 a72821f4f27f2a6b44c8717638c0ca39 345 Gene3D G3DSA:3.90.650.10 171 342 2.9E-62 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Acife_1433 a72821f4f27f2a6b44c8717638c0ca39 345 SUPERFAMILY SSF55326 7 169 1.29E-51 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Acife_1433 a72821f4f27f2a6b44c8717638c0ca39 345 SUPERFAMILY SSF56042 172 339 7.18E-54 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Acife_1433 a72821f4f27f2a6b44c8717638c0ca39 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 333 2.5E-134 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Acife_1433 a72821f4f27f2a6b44c8717638c0ca39 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 164 8.8E-17 T 12-10-2018 IPR016188 PurM-like, N-terminal domain Acife_2075 a1b5f99f811c49f812423782c0f133aa 412 Gene3D G3DSA:2.40.160.10 39 328 7.8E-6 T 12-10-2018 IPR023614 Porin domain superfamily Acife_2075 a1b5f99f811c49f812423782c0f133aa 412 Pfam PF13372 Alginate export 40 291 3.8E-13 T 12-10-2018 IPR025388 Alginate export domain Acife_1824 0ef3697ae15e502499ba96de620eca1f 390 Gene3D G3DSA:1.10.10.2140 324 375 5.7E-25 T 12-10-2018 Acife_1824 0ef3697ae15e502499ba96de620eca1f 390 Gene3D G3DSA:3.40.50.11750 20 269 1.3E-105 T 12-10-2018 Acife_1824 0ef3697ae15e502499ba96de620eca1f 390 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 375 9.2E-141 T 12-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Acife_1824 0ef3697ae15e502499ba96de620eca1f 390 Pfam PF01924 Hydrogenase formation hypA family 12 373 8.2E-154 T 12-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Acife_1824 0ef3697ae15e502499ba96de620eca1f 390 Gene3D G3DSA:3.40.50.11740 61 310 1.3E-105 T 12-10-2018 Acife_1824 0ef3697ae15e502499ba96de620eca1f 390 PIRSF PIRSF005622 1 378 3.0E-155 T 12-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Acife_2202 864a04f3d1db0ac902ee702864602e9a 340 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 337 7.5E-138 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Acife_2202 864a04f3d1db0ac902ee702864602e9a 340 SUPERFAMILY SSF51735 6 160 3.95E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2202 864a04f3d1db0ac902ee702864602e9a 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 121 8.1E-33 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Acife_2202 864a04f3d1db0ac902ee702864602e9a 340 SMART SM00859 7 122 4.2E-44 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Acife_2202 864a04f3d1db0ac902ee702864602e9a 340 SUPERFAMILY SSF55347 132 323 6.25E-72 T 12-10-2018 Acife_2202 864a04f3d1db0ac902ee702864602e9a 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 322 4.4E-55 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Acife_2202 864a04f3d1db0ac902ee702864602e9a 340 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 5 336 37.352 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Acife_2202 864a04f3d1db0ac902ee702864602e9a 340 Gene3D G3DSA:3.40.50.720 8 334 3.6E-140 T 12-10-2018 Acife_2202 864a04f3d1db0ac902ee702864602e9a 340 PIRSF PIRSF000148 5 340 1.8E-132 T 12-10-2018 Acife_2202 864a04f3d1db0ac902ee702864602e9a 340 Gene3D G3DSA:3.30.360.10 131 319 3.6E-140 T 12-10-2018 Acife_3014 2e1f0e322b8595632d938db6c4c102e1 476 Pfam PF12710 haloacid dehalogenase-like hydrolase 11 148 7.5E-7 T 12-10-2018 Acife_3014 2e1f0e322b8595632d938db6c4c102e1 476 Gene3D G3DSA:3.40.50.1000 4 175 1.8E-12 T 12-10-2018 IPR023214 HAD superfamily Acife_3014 2e1f0e322b8595632d938db6c4c102e1 476 Gene3D G3DSA:1.10.357.140 195 346 1.9E-10 T 12-10-2018 Acife_3014 2e1f0e322b8595632d938db6c4c102e1 476 SUPERFAMILY SSF56784 9 181 1.76E-13 T 12-10-2018 IPR036412 HAD-like superfamily Acife_3014 2e1f0e322b8595632d938db6c4c102e1 476 Pfam PF01040 UbiA prenyltransferase family 210 444 3.5E-18 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Acife_0115 fcd9256ceb68662cd9214c9ea0ebad3f 284 Gene3D G3DSA:3.20.20.150 13 283 3.2E-82 T 12-10-2018 Acife_0115 fcd9256ceb68662cd9214c9ea0ebad3f 284 SUPERFAMILY SSF51658 34 224 1.42E-15 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Acife_0115 fcd9256ceb68662cd9214c9ea0ebad3f 284 Pfam PF05114 Protein of unknown function (DUF692) 17 278 7.5E-98 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 Acife_0878 080eba57b4ee4c6faf9451ecae3aca1d 98 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 24 66 8.9E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_0878 080eba57b4ee4c6faf9451ecae3aca1d 98 SMART SM00966 24 69 1.9E-6 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_0878 080eba57b4ee4c6faf9451ecae3aca1d 98 Gene3D G3DSA:2.10.260.10 18 64 1.0E-18 T 12-10-2018 Acife_0878 080eba57b4ee4c6faf9451ecae3aca1d 98 SUPERFAMILY SSF89447 22 82 2.44E-13 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_0964 81188a9387ab99d39e4e0881bd6a1170 509 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 295 6.9E-72 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0964 81188a9387ab99d39e4e0881bd6a1170 509 Pfam PF01676 Metalloenzyme superfamily 7 494 4.1E-73 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Acife_0964 81188a9387ab99d39e4e0881bd6a1170 509 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 507 48.541 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0964 81188a9387ab99d39e4e0881bd6a1170 509 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 7 506 1.1E-209 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0964 81188a9387ab99d39e4e0881bd6a1170 509 PIRSF PIRSF001492 1 509 1.7E-193 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0964 81188a9387ab99d39e4e0881bd6a1170 509 SUPERFAMILY SSF64158 79 306 1.18E-76 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0964 81188a9387ab99d39e4e0881bd6a1170 509 Gene3D G3DSA:3.40.1450.10 79 308 2.7E-206 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0964 81188a9387ab99d39e4e0881bd6a1170 509 Gene3D G3DSA:3.40.720.10 7 504 2.7E-206 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Acife_0964 81188a9387ab99d39e4e0881bd6a1170 509 SUPERFAMILY SSF53649 6 506 2.22E-74 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Acife_2828 052192d2cf454863c52a9d200cb720e7 153 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 7 146 3.3E-57 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Acife_2828 052192d2cf454863c52a9d200cb720e7 153 PIRSF PIRSF001399 4 151 8.6E-57 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Acife_2828 052192d2cf454863c52a9d200cb720e7 153 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 153 68.725 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Acife_2828 052192d2cf454863c52a9d200cb720e7 153 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 9 144 8.0E-51 T 12-10-2018 Acife_2828 052192d2cf454863c52a9d200cb720e7 153 ProSitePatterns PS01029 Dehydroquinase class II signature. 11 28 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Acife_2828 052192d2cf454863c52a9d200cb720e7 153 SUPERFAMILY SSF52304 7 150 3.79E-60 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Acife_2828 052192d2cf454863c52a9d200cb720e7 153 Gene3D G3DSA:3.40.50.9100 2 153 1.2E-62 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Acife_2828 052192d2cf454863c52a9d200cb720e7 153 Pfam PF01220 Dehydroquinase class II 7 144 9.6E-58 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 ProSitePatterns PS00801 Transketolase signature 1. 30 49 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 276 3.1E-116 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 Pfam PF02779 Transketolase, pyrimidine binding domain 314 475 2.1E-37 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 SUPERFAMILY SSF52518 313 499 6.4E-59 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 SUPERFAMILY SSF52518 3 375 1.05E-77 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 4 615 45.212 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 SMART SM00861 313 477 3.3E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 ProSitePatterns PS00802 Transketolase signature 2. 419 435 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 608 5.3E-262 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 SUPERFAMILY SSF52922 486 608 7.33E-30 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 Gene3D G3DSA:3.40.50.970 310 482 2.6E-65 T 12-10-2018 Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 Pfam PF02780 Transketolase, C-terminal domain 490 606 3.9E-24 T 12-10-2018 IPR033248 Transketolase, C-terminal domain Acife_1701 78af3564eca68a3c34737ebfc9dbc9da 624 Gene3D G3DSA:3.40.50.920 490 615 1.7E-38 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 SMART SM00963 1 86 6.8E-37 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 Pfam PF00448 SRP54-type protein, GTPase domain 100 297 2.8E-73 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 SMART SM00382 99 247 1.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 9.4E-23 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 431 7.7E-181 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 Gene3D G3DSA:1.20.120.140 4 307 3.3E-123 T 12-10-2018 Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 Gene3D G3DSA:1.10.260.30 329 449 2.5E-44 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 SUPERFAMILY SSF52540 42 354 1.46E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 Gene3D G3DSA:3.40.50.300 90 286 3.3E-123 T 12-10-2018 Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 SUPERFAMILY SSF47446 299 433 8.11E-46 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 SMART SM00962 100 297 1.1E-113 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 443 33.689 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Acife_0289 208a6516605791bbdd0cc7005bbc7c16 458 Pfam PF02978 Signal peptide binding domain 330 428 2.9E-34 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Acife_0735 c8874156cd9a7ec842401764002b0a13 103 SMART SM00938 4 102 1.3E-25 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0735 c8874156cd9a7ec842401764002b0a13 103 SUPERFAMILY SSF54913 1 102 1.94E-26 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Acife_0735 c8874156cd9a7ec842401764002b0a13 103 PRINTS PR00340 P-II protein signature 23 41 3.0E-22 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0735 c8874156cd9a7ec842401764002b0a13 103 PRINTS PR00340 P-II protein signature 52 75 3.0E-22 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0735 c8874156cd9a7ec842401764002b0a13 103 PRINTS PR00340 P-II protein signature 83 103 3.0E-22 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0735 c8874156cd9a7ec842401764002b0a13 103 PRINTS PR00340 P-II protein signature 2 17 3.0E-22 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0735 c8874156cd9a7ec842401764002b0a13 103 Gene3D G3DSA:3.30.70.120 1 103 3.0E-28 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Acife_0735 c8874156cd9a7ec842401764002b0a13 103 Pfam PF00543 Nitrogen regulatory protein P-II 4 102 2.4E-25 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_2830 15a0fba6336568118801d6ca53b3270d 448 Gene3D G3DSA:3.30.470.130 1 447 5.2E-192 T 12-10-2018 Acife_2830 15a0fba6336568118801d6ca53b3270d 448 SUPERFAMILY SSF51246 333 446 5.76E-43 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Acife_2830 15a0fba6336568118801d6ca53b3270d 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.9E-220 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Acife_2830 15a0fba6336568118801d6ca53b3270d 448 Pfam PF02785 Biotin carboxylase C-terminal domain 338 443 2.7E-39 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Acife_2830 15a0fba6336568118801d6ca53b3270d 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 324 2.4E-81 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Acife_2830 15a0fba6336568118801d6ca53b3270d 448 SUPERFAMILY SSF56059 83 347 1.63E-71 T 12-10-2018 Acife_2830 15a0fba6336568118801d6ca53b3270d 448 SMART SM00878 338 443 3.2E-63 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Acife_2830 15a0fba6336568118801d6ca53b3270d 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Acife_2830 15a0fba6336568118801d6ca53b3270d 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Acife_2830 15a0fba6336568118801d6ca53b3270d 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.8E-46 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Acife_2830 15a0fba6336568118801d6ca53b3270d 448 SUPERFAMILY SSF52440 1 113 1.58E-48 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Acife_0550 5a38ca680d222e43ef34029ef5631107 288 Pfam PF05175 Methyltransferase small domain 115 204 6.5E-14 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Acife_0550 5a38ca680d222e43ef34029ef5631107 288 Gene3D G3DSA:1.10.8.10 14 96 7.2E-17 T 12-10-2018 Acife_0550 5a38ca680d222e43ef34029ef5631107 288 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 15 287 39.625 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Acife_0550 5a38ca680d222e43ef34029ef5631107 288 Gene3D G3DSA:3.40.50.150 97 288 2.4E-51 T 12-10-2018 Acife_0550 5a38ca680d222e43ef34029ef5631107 288 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 194 200 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Acife_0550 5a38ca680d222e43ef34029ef5631107 288 SUPERFAMILY SSF53335 18 283 9.8E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0550 5a38ca680d222e43ef34029ef5631107 288 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 36 283 2.9E-77 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Acife_0550 5a38ca680d222e43ef34029ef5631107 288 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 27 286 4.7E-64 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Acife_0199 f2787c214d26f7559631d2f5249b697c 376 Gene3D G3DSA:2.40.30.170 53 270 3.1E-62 T 12-10-2018 Acife_0199 f2787c214d26f7559631d2f5249b697c 376 SUPERFAMILY SSF111369 48 284 4.97E-55 T 12-10-2018 Acife_0199 f2787c214d26f7559631d2f5249b697c 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 358 6.4E-67 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Acife_0199 f2787c214d26f7559631d2f5249b697c 376 Gene3D G3DSA:2.40.420.20 271 359 4.0E-11 T 12-10-2018 Acife_0199 f2787c214d26f7559631d2f5249b697c 376 Gene3D G3DSA:1.10.287.470 94 167 3.1E-62 T 12-10-2018 Acife_0199 f2787c214d26f7559631d2f5249b697c 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 279 3.8E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_0199 f2787c214d26f7559631d2f5249b697c 376 Gene3D G3DSA:2.40.50.100 59 202 3.1E-62 T 12-10-2018 Acife_1443 efe65545d590408f056dcb2c602f773c 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 191 9.8E-8 T 12-10-2018 Acife_1443 efe65545d590408f056dcb2c602f773c 249 Gene3D G3DSA:3.40.50.720 2 248 1.2E-81 T 12-10-2018 Acife_1443 efe65545d590408f056dcb2c602f773c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 8.4E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_1443 efe65545d590408f056dcb2c602f773c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 8.4E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_1443 efe65545d590408f056dcb2c602f773c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.4E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_1443 efe65545d590408f056dcb2c602f773c 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Acife_1443 efe65545d590408f056dcb2c602f773c 249 SUPERFAMILY SSF51735 6 248 8.29E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1443 efe65545d590408f056dcb2c602f773c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 4.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_1443 efe65545d590408f056dcb2c602f773c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_1443 efe65545d590408f056dcb2c602f773c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_1443 efe65545d590408f056dcb2c602f773c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_1443 efe65545d590408f056dcb2c602f773c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 4.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_1443 efe65545d590408f056dcb2c602f773c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.3E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_1443 efe65545d590408f056dcb2c602f773c 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 246 3.1E-95 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Acife_1443 efe65545d590408f056dcb2c602f773c 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 5.1E-60 T 12-10-2018 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 Gene3D G3DSA:1.20.140.160 153 281 5.5E-14 T 12-10-2018 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 Pfam PF04542 Sigma-70 region 2 54 123 9.8E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 280 1.2E-118 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 SUPERFAMILY SSF88946 12 123 9.94E-38 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 SUPERFAMILY SSF88659 194 279 6.92E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 Gene3D G3DSA:1.10.601.10 15 123 1.4E-26 T 12-10-2018 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 PRINTS PR00046 Major sigma-70 factor signature 264 275 1.5E-16 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 PRINTS PR00046 Major sigma-70 factor signature 78 91 1.5E-16 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 PRINTS PR00046 Major sigma-70 factor signature 230 242 1.5E-16 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 PRINTS PR00046 Major sigma-70 factor signature 249 264 1.5E-16 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 279 3.5E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 Pfam PF00140 Sigma-70 factor, region 1.2 16 47 7.9E-5 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_0559 5159df85f27ac4cb058fe852b1d6e609 283 Pfam PF04545 Sigma-70, region 4 226 277 1.3E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Acife_2314 f30942b29f044343da74a9e28adb8fa2 261 SMART SM00382 98 230 0.0049 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2314 f30942b29f044343da74a9e28adb8fa2 261 PIRSF PIRSF003073 1 249 1.3E-70 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Acife_2314 f30942b29f044343da74a9e28adb8fa2 261 Gene3D G3DSA:3.40.50.300 61 242 2.4E-40 T 12-10-2018 Acife_2314 f30942b29f044343da74a9e28adb8fa2 261 SUPERFAMILY SSF52540 67 223 2.03E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2314 f30942b29f044343da74a9e28adb8fa2 261 Pfam PF01695 IstB-like ATP binding protein 53 230 7.2E-53 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Acife_2298 023022dbe617d10fb5c2925a508df911 264 Gene3D G3DSA:1.10.10.10 12 87 2.7E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2298 023022dbe617d10fb5c2925a508df911 264 Pfam PF13730 Helix-turn-helix domain 16 61 6.8E-7 T 12-10-2018 Acife_0494 3b9d74bf9161af62bc5b1b8ce631c467 441 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 260 361 3.1E-7 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_0494 3b9d74bf9161af62bc5b1b8ce631c467 441 Gene3D G3DSA:3.50.50.100 48 440 1.4E-58 T 12-10-2018 Acife_0494 3b9d74bf9161af62bc5b1b8ce631c467 441 SUPERFAMILY SSF51905 51 378 8.07E-19 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1838 63ff8ea84ba8e2cc0af05ce57751a491 269 Hamap MF_01974 Methionine aminopeptidase [map]. 11 264 40.503 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Acife_1838 63ff8ea84ba8e2cc0af05ce57751a491 269 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 13 263 6.0E-92 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Acife_1838 63ff8ea84ba8e2cc0af05ce57751a491 269 Pfam PF00557 Metallopeptidase family M24 20 255 1.8E-49 T 12-10-2018 IPR000994 Peptidase M24 Acife_1838 63ff8ea84ba8e2cc0af05ce57751a491 269 Gene3D G3DSA:3.90.230.10 11 267 9.5E-106 T 12-10-2018 Acife_1838 63ff8ea84ba8e2cc0af05ce57751a491 269 SUPERFAMILY SSF55920 12 267 2.36E-87 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like Acife_1838 63ff8ea84ba8e2cc0af05ce57751a491 269 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 181 199 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Acife_1838 63ff8ea84ba8e2cc0af05ce57751a491 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 105 121 7.3E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Acife_1838 63ff8ea84ba8e2cc0af05ce57751a491 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 175 187 7.3E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Acife_1838 63ff8ea84ba8e2cc0af05ce57751a491 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 83 96 7.3E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Acife_1838 63ff8ea84ba8e2cc0af05ce57751a491 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 206 218 7.3E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Acife_2517 c3860074cc6e72ca5356c43dceea7d57 302 Gene3D G3DSA:3.30.470.80 185 296 2.8E-30 T 12-10-2018 Acife_2517 c3860074cc6e72ca5356c43dceea7d57 302 Gene3D G3DSA:3.40.50.20 3 118 8.3E-22 T 12-10-2018 Acife_2517 c3860074cc6e72ca5356c43dceea7d57 302 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 7 288 1.8E-49 T 12-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 Acife_2517 c3860074cc6e72ca5356c43dceea7d57 302 SUPERFAMILY SSF56059 93 291 9.49E-38 T 12-10-2018 Acife_2517 c3860074cc6e72ca5356c43dceea7d57 302 Gene3D G3DSA:3.30.1490.20 119 183 6.3E-15 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Acife_2517 c3860074cc6e72ca5356c43dceea7d57 302 Pfam PF08443 RimK-like ATP-grasp domain 102 288 1.1E-33 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Acife_1569 09e76ad6e1aab03ce83885bdb8545747 153 SMART SM00966 55 100 2.1E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_1569 09e76ad6e1aab03ce83885bdb8545747 153 SUPERFAMILY SSF89447 48 96 5.58E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_1569 09e76ad6e1aab03ce83885bdb8545747 153 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 55 133 9.0E-8 T 12-10-2018 Acife_1569 09e76ad6e1aab03ce83885bdb8545747 153 Gene3D G3DSA:2.10.260.10 50 93 3.2E-11 T 12-10-2018 Acife_1569 09e76ad6e1aab03ce83885bdb8545747 153 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 55 150 8.4E-15 T 12-10-2018 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 Acife_1569 09e76ad6e1aab03ce83885bdb8545747 153 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 56 94 8.4E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_1979 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 142 5.7E-15 T 12-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Acife_1979 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF01610 Transposase 157 390 7.7E-72 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Acife_1979 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 87 3.2E-13 T 12-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Acife_1203 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 142 5.7E-15 T 12-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Acife_1203 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF01610 Transposase 157 390 7.7E-72 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Acife_1203 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 87 3.2E-13 T 12-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Acife_1563 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 142 5.7E-15 T 12-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Acife_1563 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF01610 Transposase 157 390 7.7E-72 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Acife_1563 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 87 3.2E-13 T 12-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Acife_2667 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 142 5.7E-15 T 12-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Acife_2667 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF01610 Transposase 157 390 7.7E-72 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Acife_2667 c4b56df98ed1d98016443bb04adc3e52 404 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 87 3.2E-13 T 12-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 Gene3D G3DSA:3.30.930.10 117 584 2.6E-196 T 12-10-2018 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 476 492 2.9E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 2.9E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 520 534 2.9E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 2.9E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 560 3.6E-108 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 8.4E-14 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 Gene3D G3DSA:2.40.50.140 1 106 1.6E-33 T 12-10-2018 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 SUPERFAMILY SSF55261 290 421 1.29E-41 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 2.0E-245 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 SUPERFAMILY SSF50249 1 105 8.0E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 SUPERFAMILY SSF55681 110 586 5.36E-106 T 12-10-2018 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 Gene3D G3DSA:3.30.1360.30 273 422 2.6E-196 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 Pfam PF02938 GAD domain 309 408 2.1E-28 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Acife_0147 f4fe1806c3c3a236da9c435f15e5e4f9 596 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 586 33.818 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Acife_3199 d4a5e2946032d34ecf75d066aed95131 260 Pfam PF13614 AAA domain 8 182 5.5E-60 T 12-10-2018 IPR025669 AAA domain Acife_3199 d4a5e2946032d34ecf75d066aed95131 260 Gene3D G3DSA:3.40.50.300 3 258 9.1E-76 T 12-10-2018 Acife_3199 d4a5e2946032d34ecf75d066aed95131 260 SUPERFAMILY SSF52540 8 256 2.9E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3199 d4a5e2946032d34ecf75d066aed95131 260 PRINTS PR00091 Nitrogenase component II signature 15 28 6.8E-5 T 12-10-2018 Acife_3199 d4a5e2946032d34ecf75d066aed95131 260 PRINTS PR00091 Nitrogenase component II signature 37 52 6.8E-5 T 12-10-2018 Acife_3199 d4a5e2946032d34ecf75d066aed95131 260 PIRSF PIRSF009320 8 86 3.9E-17 T 12-10-2018 Acife_3199 d4a5e2946032d34ecf75d066aed95131 260 PIRSF PIRSF009320 100 260 4.8E-9 T 12-10-2018 Acife_2347 7aa467d887f65de17a7e872461373982 400 SUPERFAMILY SSF50022 23 161 9.56E-39 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_2347 7aa467d887f65de17a7e872461373982 400 SUPERFAMILY SSF55961 164 385 2.51E-29 T 12-10-2018 Acife_2347 7aa467d887f65de17a7e872461373982 400 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 3.2E-18 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Acife_2347 7aa467d887f65de17a7e872461373982 400 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 62 77 3.2E-18 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Acife_2347 7aa467d887f65de17a7e872461373982 400 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 83 103 3.2E-18 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Acife_2347 7aa467d887f65de17a7e872461373982 400 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 32 57 3.2E-18 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Acife_2347 7aa467d887f65de17a7e872461373982 400 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 184 206 3.2E-18 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Acife_2347 7aa467d887f65de17a7e872461373982 400 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 147 173 3.2E-18 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Acife_2347 7aa467d887f65de17a7e872461373982 400 Gene3D G3DSA:3.90.380.10 26 382 1.7E-62 T 12-10-2018 Acife_2347 7aa467d887f65de17a7e872461373982 400 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 195 386 1.3E-21 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 Acife_2347 7aa467d887f65de17a7e872461373982 400 Pfam PF00355 Rieske [2Fe-2S] domain 48 136 3.1E-17 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Acife_2347 7aa467d887f65de17a7e872461373982 400 Gene3D G3DSA:2.102.10.10 45 167 1.7E-62 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 Gene3D G3DSA:3.40.50.150 238 431 8.3E-58 T 12-10-2018 Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 Gene3D G3DSA:1.10.287.730 153 179 4.4E-7 T 12-10-2018 Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 Pfam PF01029 NusB family 43 136 3.1E-11 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 SUPERFAMILY SSF53335 151 430 1.43E-67 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 258 268 2.4E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 323 335 2.4E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 229 243 2.4E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 373 389 2.4E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 413 430 2.4E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 SUPERFAMILY SSF48013 19 156 3.27E-22 T 12-10-2018 IPR035926 NusB-like superfamily Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 Gene3D G3DSA:1.10.940.10 16 149 5.3E-25 T 12-10-2018 IPR035926 NusB-like superfamily Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 Gene3D G3DSA:3.30.70.1170 180 237 3.6E-14 T 12-10-2018 Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 20 430 8.0E-98 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Acife_0017 88874301c104e289b9a9e2dc9578ff61 432 Pfam PF01189 16S rRNA methyltransferase RsmB/F 247 428 6.8E-55 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Acife_0306 d1e966c75036b38bde1c4b28468df0cb 1059 Pfam PF11867 Domain of unknown function (DUF3387) 724 1046 8.4E-40 T 12-10-2018 IPR021810 Protein of unknown function DUF3387 Acife_0306 d1e966c75036b38bde1c4b28468df0cb 1059 Gene3D G3DSA:3.90.1570.50 104 259 5.8E-25 T 12-10-2018 Acife_0306 d1e966c75036b38bde1c4b28468df0cb 1059 SMART SM00487 250 466 8.8E-10 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_0306 d1e966c75036b38bde1c4b28468df0cb 1059 Pfam PF04851 Type III restriction enzyme, res subunit 275 428 1.4E-13 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Acife_0306 d1e966c75036b38bde1c4b28468df0cb 1059 Gene3D G3DSA:3.40.50.300 613 724 6.6E-22 T 12-10-2018 Acife_0306 d1e966c75036b38bde1c4b28468df0cb 1059 Gene3D G3DSA:3.40.50.300 448 607 1.6E-11 T 12-10-2018 Acife_0306 d1e966c75036b38bde1c4b28468df0cb 1059 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 7 720 5.1E-141 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 Acife_0306 d1e966c75036b38bde1c4b28468df0cb 1059 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 211 2.6E-33 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Acife_0306 d1e966c75036b38bde1c4b28468df0cb 1059 SUPERFAMILY SSF52540 217 465 1.55E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0306 d1e966c75036b38bde1c4b28468df0cb 1059 Gene3D G3DSA:3.40.50.300 266 447 4.0E-43 T 12-10-2018 Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 Gene3D G3DSA:3.30.1370.110 698 778 5.8E-16 T 12-10-2018 Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 SMART SM00463 700 778 5.2E-10 T 12-10-2018 IPR002625 Smr domain Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 SUPERFAMILY SSF52540 308 522 1.21E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 SMART SM00534 338 521 2.5E-45 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 Gene3D G3DSA:3.40.50.300 304 606 8.8E-67 T 12-10-2018 Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 PIRSF PIRSF005814 11 778 2.3E-158 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 Pfam PF00488 MutS domain V 341 519 1.8E-31 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 SMART SM00533 21 322 3.3E-5 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 14 777 17.652 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 SUPERFAMILY SSF48334 38 288 8.11E-18 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 SUPERFAMILY SSF160443 701 773 2.48E-6 T 12-10-2018 IPR036063 Smr domain superfamily Acife_2384 bf9aa9d37f47f913604d909e0f25d0a0 778 Pfam PF01713 Smr domain 703 777 2.1E-12 T 12-10-2018 IPR002625 Smr domain Acife_1492 8d8fb2eb44da2752d3850da5e9ff4292 269 Gene3D G3DSA:3.10.310.10 120 250 9.5E-93 T 12-10-2018 Acife_1492 8d8fb2eb44da2752d3850da5e9ff4292 269 Gene3D G3DSA:3.10.310.10 6 254 9.5E-93 T 12-10-2018 Acife_1492 8d8fb2eb44da2752d3850da5e9ff4292 269 PIRSF PIRSF016184 1 262 4.0E-59 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Acife_1492 8d8fb2eb44da2752d3850da5e9ff4292 269 SUPERFAMILY SSF54506 1 261 5.99E-80 T 12-10-2018 Acife_1492 8d8fb2eb44da2752d3850da5e9ff4292 269 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 236 1.4E-38 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Acife_1492 8d8fb2eb44da2752d3850da5e9ff4292 269 Pfam PF02567 Phenazine biosynthesis-like protein 8 258 4.8E-59 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Acife_0836 71d686b5e0ff1d09e421efdc1a51b7bc 81 SUPERFAMILY SSF47598 3 44 4.11E-10 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_0836 71d686b5e0ff1d09e421efdc1a51b7bc 81 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 7 78 1.3E-16 T 12-10-2018 IPR022789 Antitoxin ParD Acife_0836 71d686b5e0ff1d09e421efdc1a51b7bc 81 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 7 72 3.1E-20 T 12-10-2018 IPR022789 Antitoxin ParD Acife_0836 71d686b5e0ff1d09e421efdc1a51b7bc 81 Gene3D G3DSA:1.10.8.1250 12 81 2.5E-18 T 12-10-2018 IPR038296 Antitoxin ParD superfamily Acife_1604 0daf9af55bef08b340b980a432e4ff2c 231 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 4 207 1.2E-42 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Acife_1604 0daf9af55bef08b340b980a432e4ff2c 231 Gene3D G3DSA:1.20.1440.100 15 88 4.6E-75 T 12-10-2018 Acife_1604 0daf9af55bef08b340b980a432e4ff2c 231 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 194 2.4E-24 T 12-10-2018 Acife_1604 0daf9af55bef08b340b980a432e4ff2c 231 SUPERFAMILY SSF56784 3 217 1.35E-33 T 12-10-2018 IPR036412 HAD-like superfamily Acife_1604 0daf9af55bef08b340b980a432e4ff2c 231 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 193 6.1E-39 T 12-10-2018 Acife_1604 0daf9af55bef08b340b980a432e4ff2c 231 Gene3D G3DSA:3.40.50.1000 4 219 4.6E-75 T 12-10-2018 IPR023214 HAD superfamily Acife_2172 83881c90851a48a850ecf1f8bc23b2ff 69 Pfam PF04324 BFD-like [2Fe-2S] binding domain 14 61 6.1E-6 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Acife_1136 a1af0ebbb1e940921f39fceec8daa41f 100 Gene3D G3DSA:3.30.70.1060 1 98 3.5E-33 T 12-10-2018 Acife_1136 a1af0ebbb1e940921f39fceec8daa41f 100 Pfam PF03795 YCII-related domain 1 94 2.0E-24 T 12-10-2018 IPR005545 YCII-related Acife_1136 a1af0ebbb1e940921f39fceec8daa41f 100 SUPERFAMILY SSF54909 1 97 2.47E-27 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Acife_3246 c997f40f5048f531a1fadab43429fe3b 108 Gene3D G3DSA:2.30.30.110 1 108 2.5E-31 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Acife_3246 c997f40f5048f531a1fadab43429fe3b 108 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 103 1.0E-25 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Acife_3246 c997f40f5048f531a1fadab43429fe3b 108 PIRSF PIRSF033490 1 106 1.2E-31 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Acife_3246 c997f40f5048f531a1fadab43429fe3b 108 SUPERFAMILY SSF50118 1 106 7.52E-31 T 12-10-2018 Acife_1954 a9762139c606e128a1526cf4f6a73416 366 SUPERFAMILY SSF52540 19 169 2.68E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1954 a9762139c606e128a1526cf4f6a73416 366 Pfam PF01926 50S ribosome-binding GTPase 30 139 8.7E-15 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1954 a9762139c606e128a1526cf4f6a73416 366 Gene3D G3DSA:3.40.50.300 10 209 1.2E-24 T 12-10-2018 Acife_2794 5f404d54f4f8957e47f7d888217cc8c3 256 SUPERFAMILY SSF53448 4 178 1.22E-20 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2794 5f404d54f4f8957e47f7d888217cc8c3 256 Gene3D G3DSA:3.90.550.10 2 221 5.5E-20 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2794 5f404d54f4f8957e47f7d888217cc8c3 256 Pfam PF00535 Glycosyl transferase family 2 6 107 4.9E-13 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_3200 d16e2ae17c705861c5f683b2afc65667 213 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 36 190 3.5E-40 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Acife_3200 d16e2ae17c705861c5f683b2afc65667 213 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 24 212 24.501 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Acife_3200 d16e2ae17c705861c5f683b2afc65667 213 SUPERFAMILY SSF53335 24 190 1.33E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_3200 d16e2ae17c705861c5f683b2afc65667 213 Pfam PF02527 rRNA small subunit methyltransferase G 32 195 2.4E-44 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Acife_3200 d16e2ae17c705861c5f683b2afc65667 213 PIRSF PIRSF003078 12 206 3.1E-46 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Acife_3200 d16e2ae17c705861c5f683b2afc65667 213 Gene3D G3DSA:3.40.50.150 4 210 4.9E-54 T 12-10-2018 Acife_2451 1ac8a775d8b553adf50bf184fbd03a28 250 SUPERFAMILY SSF52317 17 189 3.28E-19 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_2451 1ac8a775d8b553adf50bf184fbd03a28 250 Gene3D G3DSA:3.40.50.880 1 236 2.7E-27 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_0656 7228735e4b2b32cb2b935cb7e8fa2d17 465 Gene3D G3DSA:3.90.1300.10 10 456 1.1E-132 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Acife_0656 7228735e4b2b32cb2b935cb7e8fa2d17 465 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 11 458 1.5E-203 T 12-10-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 Acife_0656 7228735e4b2b32cb2b935cb7e8fa2d17 465 Pfam PF01425 Amidase 27 445 3.1E-97 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Acife_0656 7228735e4b2b32cb2b935cb7e8fa2d17 465 SUPERFAMILY SSF75304 11 454 4.58E-127 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Acife_2193 19bcd52a9da86885489a8437007a8ffb 481 PIRSF PIRSF000485 16 475 4.1E-167 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Acife_2193 19bcd52a9da86885489a8437007a8ffb 481 Pfam PF13537 Glutamine amidotransferase domain 101 218 3.1E-20 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Acife_2193 19bcd52a9da86885489a8437007a8ffb 481 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 20 462 8.6E-160 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Acife_2193 19bcd52a9da86885489a8437007a8ffb 481 Gene3D G3DSA:3.40.50.2020 280 444 1.0E-156 T 12-10-2018 Acife_2193 19bcd52a9da86885489a8437007a8ffb 481 Pfam PF00156 Phosphoribosyl transferase domain 285 395 3.3E-10 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Acife_2193 19bcd52a9da86885489a8437007a8ffb 481 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 19 461 46.99 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Acife_2193 19bcd52a9da86885489a8437007a8ffb 481 Gene3D G3DSA:3.60.20.10 20 462 1.0E-156 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Acife_2193 19bcd52a9da86885489a8437007a8ffb 481 SUPERFAMILY SSF56235 20 262 8.41E-67 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Acife_2193 19bcd52a9da86885489a8437007a8ffb 481 SUPERFAMILY SSF53271 256 469 4.98E-72 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Acife_2423 9c6bb4d8809c08330912849eed6a39a3 290 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 16 245 2.1E-34 T 12-10-2018 Acife_2423 9c6bb4d8809c08330912849eed6a39a3 290 SUPERFAMILY SSF53850 28 173 1.31E-10 T 12-10-2018 Acife_2423 9c6bb4d8809c08330912849eed6a39a3 290 Gene3D G3DSA:3.40.190.10 28 224 2.3E-11 T 12-10-2018 Acife_2423 9c6bb4d8809c08330912849eed6a39a3 290 Gene3D G3DSA:3.40.190.10 92 196 2.3E-11 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 SUPERFAMILY SSF82693 135 328 1.07E-11 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 SUPERFAMILY SSF82714 718 789 2.75E-7 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2140 2f061c217dedf00437216384fbe9df69 1022 SUPERFAMILY SSF82714 180 266 2.88E-7 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2140 2f061c217dedf00437216384fbe9df69 1022 Gene3D G3DSA:3.30.70.1320 132 328 1.6E-203 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 Gene3D G3DSA:1.20.1640.10 14 506 1.6E-203 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 Gene3D G3DSA:3.30.70.1430 41 803 1.6E-203 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 SUPERFAMILY SSF82693 555 640 9.42E-8 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 Gene3D G3DSA:3.30.70.1430 558 658 1.6E-203 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 Pfam PF00873 AcrB/AcrD/AcrF family 10 1009 3.2E-181 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 SUPERFAMILY SSF82693 41 124 1.15E-9 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 SUPERFAMILY SSF82866 795 1010 2.22E-38 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 Gene3D G3DSA:1.20.1640.10 507 1008 1.6E-203 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 Gene3D G3DSA:3.30.2090.10 177 274 1.6E-203 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_2140 2f061c217dedf00437216384fbe9df69 1022 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 3.9E-38 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 3.9E-38 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 3.9E-38 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 3.9E-38 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 3.9E-38 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 3.9E-38 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.9E-38 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 3.9E-38 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 Gene3D G3DSA:3.30.70.1440 659 854 1.6E-203 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 SUPERFAMILY SSF82866 296 494 2.35E-36 T 12-10-2018 Acife_2140 2f061c217dedf00437216384fbe9df69 1022 Gene3D G3DSA:3.30.2090.10 709 795 1.6E-203 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Acife_3102 3d1e88e401f222e5e3cd0a847850a981 310 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 304 8.9E-102 T 12-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Acife_3102 3d1e88e401f222e5e3cd0a847850a981 310 Gene3D G3DSA:3.30.200.20 1 102 1.6E-33 T 12-10-2018 Acife_3102 3d1e88e401f222e5e3cd0a847850a981 310 Gene3D G3DSA:3.90.1200.10 109 310 6.3E-64 T 12-10-2018 Acife_3102 3d1e88e401f222e5e3cd0a847850a981 310 SUPERFAMILY SSF56112 6 309 2.19E-65 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Acife_3102 3d1e88e401f222e5e3cd0a847850a981 310 Pfam PF01636 Phosphotransferase enzyme family 28 246 1.9E-32 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase Acife_3102 3d1e88e401f222e5e3cd0a847850a981 310 Hamap MF_00301 Homoserine kinase [thrB]. 1 310 130.679 T 12-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Acife_0682 e292ef077b5add97417c3180a9edc572 476 SUPERFAMILY SSF52172 22 204 1.71E-42 T 12-10-2018 IPR011006 CheY-like superfamily Acife_0682 e292ef077b5add97417c3180a9edc572 476 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 184 197 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Acife_0682 e292ef077b5add97417c3180a9edc572 476 SUPERFAMILY SSF46689 373 462 7.62E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_0682 e292ef077b5add97417c3180a9edc572 476 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 373 382 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Acife_0682 e292ef077b5add97417c3180a9edc572 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 246 261 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Acife_0682 e292ef077b5add97417c3180a9edc572 476 SMART SM00448 21 132 9.0E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_0682 e292ef077b5add97417c3180a9edc572 476 SMART SM00382 180 323 2.4E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0682 e292ef077b5add97417c3180a9edc572 476 Gene3D G3DSA:1.10.8.60 332 406 1.6E-22 T 12-10-2018 Acife_0682 e292ef077b5add97417c3180a9edc572 476 Gene3D G3DSA:3.40.50.2300 19 156 8.8E-39 T 12-10-2018 Acife_0682 e292ef077b5add97417c3180a9edc572 476 Gene3D G3DSA:1.10.10.60 411 464 5.6E-14 T 12-10-2018 Acife_0682 e292ef077b5add97417c3180a9edc572 476 Pfam PF00158 Sigma-54 interaction domain 161 326 1.5E-65 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Acife_0682 e292ef077b5add97417c3180a9edc572 476 Pfam PF00072 Response regulator receiver domain 23 131 1.2E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_0682 e292ef077b5add97417c3180a9edc572 476 Gene3D G3DSA:3.40.50.300 158 331 1.9E-58 T 12-10-2018 Acife_0682 e292ef077b5add97417c3180a9edc572 476 Pfam PF02954 Bacterial regulatory protein, Fis family 422 460 4.8E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_0682 e292ef077b5add97417c3180a9edc572 476 SUPERFAMILY SSF52540 160 402 3.33E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3106 74731a9ae4a3a29abbed9a3035501e75 98 Pfam PF13591 MerR HTH family regulatory protein 24 94 1.3E-15 T 12-10-2018 Acife_3106 74731a9ae4a3a29abbed9a3035501e75 98 Gene3D G3DSA:1.10.1660.10 18 97 7.5E-20 T 12-10-2018 Acife_1129 6796410da8c4c8aff3da999afc5f78e0 67 SUPERFAMILY SSF143800 1 65 2.71E-27 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_1129 6796410da8c4c8aff3da999afc5f78e0 67 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.4E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1129 6796410da8c4c8aff3da999afc5f78e0 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1129 6796410da8c4c8aff3da999afc5f78e0 67 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.4E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1129 6796410da8c4c8aff3da999afc5f78e0 67 Gene3D G3DSA:2.30.170.50 1 67 6.1E-33 T 12-10-2018 Acife_1129 6796410da8c4c8aff3da999afc5f78e0 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 28.262 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1129 6796410da8c4c8aff3da999afc5f78e0 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 1.4E-33 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1129 6796410da8c4c8aff3da999afc5f78e0 67 Pfam PF01197 Ribosomal protein L31 1 65 3.7E-32 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1685 c981a555038f1c64baff4ab3550df113 161 SUPERFAMILY SSF46785 9 97 2.8E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1685 c981a555038f1c64baff4ab3550df113 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 57 1.2E-19 T 12-10-2018 Acife_1685 c981a555038f1c64baff4ab3550df113 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 3.7E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Acife_1685 c981a555038f1c64baff4ab3550df113 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 3.7E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Acife_1685 c981a555038f1c64baff4ab3550df113 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 3.7E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Acife_1685 c981a555038f1c64baff4ab3550df113 161 Pfam PF01037 Lrp/AsnC ligand binding domain 77 150 1.9E-24 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Acife_1685 c981a555038f1c64baff4ab3550df113 161 Gene3D G3DSA:1.10.10.10 1 63 6.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1685 c981a555038f1c64baff4ab3550df113 161 Gene3D G3DSA:3.30.70.920 64 148 5.0E-28 T 12-10-2018 Acife_1685 c981a555038f1c64baff4ab3550df113 161 SUPERFAMILY SSF54909 71 160 5.1E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Acife_1685 c981a555038f1c64baff4ab3550df113 161 SMART SM00344 10 120 5.0E-41 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Acife_2553 c670b94ad1dc3cdf0413bb50dea21543 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.219 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2553 c670b94ad1dc3cdf0413bb50dea21543 158 Gene3D G3DSA:3.40.50.12280 2 158 6.4E-79 T 12-10-2018 Acife_2553 c670b94ad1dc3cdf0413bb50dea21543 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 2.8E-22 T 12-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2553 c670b94ad1dc3cdf0413bb50dea21543 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2553 c670b94ad1dc3cdf0413bb50dea21543 158 SUPERFAMILY SSF56770 9 153 1.15E-66 T 12-10-2018 Acife_2553 c670b94ad1dc3cdf0413bb50dea21543 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 2.6E-77 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_0426 cefbdb626a4a4b34f0f1a4530773c206 185 Gene3D G3DSA:1.10.10.10 108 179 3.7E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0426 cefbdb626a4a4b34f0f1a4530773c206 185 SUPERFAMILY SSF88659 120 169 4.67E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 PIRSF PIRSF002158 13 274 2.8E-101 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.63 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 SUPERFAMILY SSF50104 126 272 3.31E-63 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.8E-31 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 Gene3D G3DSA:2.40.50.140 1 114 3.2E-44 T 12-10-2018 Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 SUPERFAMILY SSF50249 3 125 5.14E-45 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 Gene3D G3DSA:4.10.950.10 196 274 5.1E-36 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 SMART SM01382 124 252 1.3E-95 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 5 273 3.7E-126 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 SMART SM01383 42 118 1.2E-40 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 Gene3D G3DSA:2.30.30.30 118 195 3.2E-34 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Acife_2707 02cc13450e3c2a4a404959dd088d5776 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 9.5E-59 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Acife_0589 a9c6e3faeab9d6b6b42a5aad60de9397 51 Pfam PF00471 Ribosomal protein L33 3 49 2.3E-18 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0589 a9c6e3faeab9d6b6b42a5aad60de9397 51 Gene3D G3DSA:2.20.28.120 1 51 4.0E-27 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0589 a9c6e3faeab9d6b6b42a5aad60de9397 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 51 2.4E-24 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0589 a9c6e3faeab9d6b6b42a5aad60de9397 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_0589 a9c6e3faeab9d6b6b42a5aad60de9397 51 SUPERFAMILY SSF57829 1 49 7.94E-19 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Acife_0589 a9c6e3faeab9d6b6b42a5aad60de9397 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.64 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0290 3ba6e6a8522271833bb25a4882785a4a 86 SUPERFAMILY SSF54565 1 80 1.26E-32 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0290 3ba6e6a8522271833bb25a4882785a4a 86 Pfam PF00886 Ribosomal protein S16 8 66 4.3E-27 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0290 3ba6e6a8522271833bb25a4882785a4a 86 Gene3D G3DSA:3.30.1320.10 1 86 4.6E-34 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0290 3ba6e6a8522271833bb25a4882785a4a 86 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 76 24.743 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0290 3ba6e6a8522271833bb25a4882785a4a 86 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 6.6E-32 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0384 9969c1f2b4516dfaaf587f6b8700f773 168 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 40 1.2E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Acife_0384 9969c1f2b4516dfaaf587f6b8700f773 168 Gene3D G3DSA:1.10.357.10 1 161 1.0E-44 T 12-10-2018 Acife_0384 9969c1f2b4516dfaaf587f6b8700f773 168 SUPERFAMILY SSF48498 64 154 1.5E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Acife_0384 9969c1f2b4516dfaaf587f6b8700f773 168 SUPERFAMILY SSF46689 2 59 2.62E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 SUPERFAMILY SSF48108 395 552 3.27E-51 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 SUPERFAMILY SSF52335 935 1070 3.53E-39 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 SUPERFAMILY SSF56059 672 933 3.89E-103 T 12-10-2018 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.143 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Gene3D G3DSA:3.30.470.20 119 402 8.4E-130 T 12-10-2018 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Gene3D G3DSA:3.30.470.20 664 935 8.0E-115 T 12-10-2018 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Gene3D G3DSA:3.40.50.20 1 116 7.3E-48 T 12-10-2018 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 708 722 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 SMART SM01096 423 546 7.6E-69 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1069 13.494 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Gene3D G3DSA:3.40.50.20 553 661 1.1E-49 T 12-10-2018 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 SUPERFAMILY SSF52440 1 127 1.09E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Gene3D G3DSA:1.10.1030.10 403 552 4.8E-49 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 426 546 1.5E-39 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Pfam PF02142 MGS-like domain 955 1041 1.9E-20 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 1048 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 1.1E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.1E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.1E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.1E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.1E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.1E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.1E-65 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 SUPERFAMILY SSF52440 556 674 8.92E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 SUPERFAMILY SSF56059 128 400 6.19E-109 T 12-10-2018 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 SMART SM00851 955 1041 6.6E-35 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 672 874 1.5E-38 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.3E-74 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Acife_1024 9163e172112115a0aa10cb07f45ae298 1077 Gene3D G3DSA:3.40.50.1380 937 1073 5.1E-39 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Acife_0588 3a6d0f42a48f46e15fc03bf7b1b8f33b 92 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 15 85 21.8 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_0588 3a6d0f42a48f46e15fc03bf7b1b8f33b 92 TIGRFAM TIGR00009 L28: ribosomal protein bL28 15 72 1.9E-28 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_0588 3a6d0f42a48f46e15fc03bf7b1b8f33b 92 Gene3D G3DSA:2.30.170.40 16 92 1.4E-34 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0588 3a6d0f42a48f46e15fc03bf7b1b8f33b 92 SUPERFAMILY SSF143800 16 91 5.89E-32 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0588 3a6d0f42a48f46e15fc03bf7b1b8f33b 92 Pfam PF00830 Ribosomal L28 family 17 76 7.7E-29 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0841 7597e08a71df4d3a3a290c9cfc78d2da 394 Pfam PF07690 Major Facilitator Superfamily 259 390 4.8E-12 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_0841 7597e08a71df4d3a3a290c9cfc78d2da 394 Pfam PF07690 Major Facilitator Superfamily 13 246 2.5E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_0841 7597e08a71df4d3a3a290c9cfc78d2da 394 Gene3D G3DSA:1.20.1250.20 6 253 6.9E-20 T 12-10-2018 Acife_0841 7597e08a71df4d3a3a290c9cfc78d2da 394 ProSitePatterns PS00216 Sugar transport proteins signature 1. 265 281 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Acife_0841 7597e08a71df4d3a3a290c9cfc78d2da 394 PRINTS PR01035 Tetracycline resistance protein signature 136 158 1.1E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Acife_0841 7597e08a71df4d3a3a290c9cfc78d2da 394 PRINTS PR01035 Tetracycline resistance protein signature 335 358 1.1E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Acife_0841 7597e08a71df4d3a3a290c9cfc78d2da 394 PRINTS PR01035 Tetracycline resistance protein signature 18 34 1.1E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Acife_0841 7597e08a71df4d3a3a290c9cfc78d2da 394 PRINTS PR01035 Tetracycline resistance protein signature 274 295 1.1E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Acife_0841 7597e08a71df4d3a3a290c9cfc78d2da 394 Gene3D G3DSA:1.20.1720.10 260 393 7.1E-14 T 12-10-2018 Acife_0841 7597e08a71df4d3a3a290c9cfc78d2da 394 SUPERFAMILY SSF103473 7 387 1.96E-48 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 294 3.9E-104 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 Gene3D G3DSA:3.40.190.10 5 209 5.7E-82 T 12-10-2018 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 Gene3D G3DSA:3.40.190.10 102 201 5.7E-82 T 12-10-2018 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 SUPERFAMILY SSF53850 3 218 5.5E-81 T 12-10-2018 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 PIRSF PIRSF001438 1 306 4.5E-113 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 212 2.3E-77 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 SUPERFAMILY SSF54782 220 304 3.01E-22 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 292 8.1E-14 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 Gene3D G3DSA:3.30.160.40 220 303 4.5E-23 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 PRINTS PR00151 Porphobilinogen deaminase signature 123 140 2.0E-42 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 PRINTS PR00151 Porphobilinogen deaminase signature 44 64 2.0E-42 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 2.0E-42 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 PRINTS PR00151 Porphobilinogen deaminase signature 75 94 2.0E-42 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 PRINTS PR00151 Porphobilinogen deaminase signature 142 159 2.0E-42 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3258 c5aa2d6ecc497f65b4c95d91bd61dd9d 306 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 4 294 36.246 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_0548 98c99619875f87b703ae78789d17a859 438 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 114 137 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Acife_0548 98c99619875f87b703ae78789d17a859 438 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 336 433 1.6E-24 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Acife_0548 98c99619875f87b703ae78789d17a859 438 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 19 433 7.9E-133 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Acife_0548 98c99619875f87b703ae78789d17a859 438 SUPERFAMILY SSF69742 18 173 1.57E-47 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Acife_0548 98c99619875f87b703ae78789d17a859 438 PIRSF PIRSF000445 17 438 2.0E-150 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Acife_0548 98c99619875f87b703ae78789d17a859 438 SUPERFAMILY SSF51735 177 330 1.17E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0548 98c99619875f87b703ae78789d17a859 438 Gene3D G3DSA:3.30.460.30 17 173 8.4E-56 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Acife_0548 98c99619875f87b703ae78789d17a859 438 SUPERFAMILY SSF69075 332 433 1.83E-23 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Acife_0548 98c99619875f87b703ae78789d17a859 438 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 187 321 2.6E-39 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Acife_0548 98c99619875f87b703ae78789d17a859 438 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 22 171 2.8E-48 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Acife_0548 98c99619875f87b703ae78789d17a859 438 Gene3D G3DSA:3.40.50.720 177 327 4.6E-40 T 12-10-2018 Acife_0548 98c99619875f87b703ae78789d17a859 438 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 18 433 29.722 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Acife_1125 f8a70c97664b00214e1e9af51cec0ff9 835 Pfam PF02687 FtsX-like permease family 734 827 1.6E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Acife_1125 f8a70c97664b00214e1e9af51cec0ff9 835 Pfam PF02687 FtsX-like permease family 282 382 1.3E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Acife_1125 f8a70c97664b00214e1e9af51cec0ff9 835 Pfam PF12704 MacB-like periplasmic core domain 22 222 1.0E-7 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Acife_2126 09912d99e8cb8dbd69e956e8ef801161 278 SMART SM00862 187 263 2.7E-11 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_2126 09912d99e8cb8dbd69e956e8ef801161 278 SUPERFAMILY SSF46894 172 265 1.28E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Acife_2126 09912d99e8cb8dbd69e956e8ef801161 278 Gene3D G3DSA:1.10.10.10 171 271 9.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2126 09912d99e8cb8dbd69e956e8ef801161 278 Pfam PF00486 Transcriptional regulatory protein, C terminal 188 263 6.7E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_1796 65389c9efc77ceb5eba85947e7a86e33 138 Gene3D G3DSA:1.25.40.10 17 127 9.1E-27 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1796 65389c9efc77ceb5eba85947e7a86e33 138 SUPERFAMILY SSF81901 18 115 1.57E-22 T 12-10-2018 Acife_1796 65389c9efc77ceb5eba85947e7a86e33 138 SMART SM00671 31 66 5.9E-8 T 12-10-2018 IPR006597 Sel1-like repeat Acife_1796 65389c9efc77ceb5eba85947e7a86e33 138 SMART SM00671 67 102 1.3E-8 T 12-10-2018 IPR006597 Sel1-like repeat Acife_1796 65389c9efc77ceb5eba85947e7a86e33 138 Pfam PF08238 Sel1 repeat 31 66 5.2E-5 T 12-10-2018 IPR006597 Sel1-like repeat Acife_1796 65389c9efc77ceb5eba85947e7a86e33 138 Pfam PF08238 Sel1 repeat 67 102 9.5E-7 T 12-10-2018 IPR006597 Sel1-like repeat Acife_2457 ce0a2c6cbcf476765ce0be46edf22ec0 276 SUPERFAMILY SSF52540 35 229 8.22E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2457 ce0a2c6cbcf476765ce0be46edf22ec0 276 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 187 269 3.2E-27 T 12-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Acife_2457 ce0a2c6cbcf476765ce0be46edf22ec0 276 Gene3D G3DSA:3.40.50.300 25 192 6.7E-30 T 12-10-2018 Acife_2457 ce0a2c6cbcf476765ce0be46edf22ec0 276 Pfam PF07728 AAA domain (dynein-related subfamily) 40 174 4.6E-32 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Acife_0053 a39513cb2efb46ad7ba850e7a3427fd0 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 168 244 5.4E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_0053 a39513cb2efb46ad7ba850e7a3427fd0 248 Gene3D G3DSA:1.10.10.10 138 247 4.8E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0053 a39513cb2efb46ad7ba850e7a3427fd0 248 SUPERFAMILY SSF46894 149 246 1.59E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Acife_0053 a39513cb2efb46ad7ba850e7a3427fd0 248 SMART SM00862 168 244 3.0E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_0053 a39513cb2efb46ad7ba850e7a3427fd0 248 SMART SM00448 19 129 7.0E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_0053 a39513cb2efb46ad7ba850e7a3427fd0 248 Gene3D G3DSA:3.40.50.2300 3 137 1.6E-37 T 12-10-2018 Acife_0053 a39513cb2efb46ad7ba850e7a3427fd0 248 Pfam PF00072 Response regulator receiver domain 21 130 5.0E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_0053 a39513cb2efb46ad7ba850e7a3427fd0 248 SUPERFAMILY SSF52172 16 142 1.85E-40 T 12-10-2018 IPR011006 CheY-like superfamily Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 Gene3D G3DSA:1.10.8.280 309 420 3.5E-242 T 12-10-2018 Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 SUPERFAMILY SSF52540 25 586 2.5E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 Gene3D G3DSA:3.40.50.300 30 611 3.5E-242 T 12-10-2018 Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 Gene3D G3DSA:3.30.190.20 152 266 3.5E-242 T 12-10-2018 Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 SUPERFAMILY SSF52540 638 927 8.95E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 Gene3D G3DSA:3.40.50.300 633 952 7.0E-140 T 12-10-2018 Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 Gene3D G3DSA:1.20.1580.10 708 846 7.0E-140 T 12-10-2018 Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 Gene3D G3DSA:1.20.1580.10 114 509 3.5E-242 T 12-10-2018 Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 Hamap MF_00205 UvrABC system protein A [uvrA]. 25 956 22.302 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 28 941 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 587 602 7.0E-5 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Acife_0299 d11510bceaf208e35153fe4c0b50dfa7 958 ProSitePatterns PS00211 ABC transporters family signature. 846 860 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_0332 00130705a19407da5fc30ba065c7de77 452 Pfam PF13481 AAA domain 66 217 5.5E-17 T 12-10-2018 Acife_0332 00130705a19407da5fc30ba065c7de77 452 PRINTS PR01874 DNA repair protein radA signature 119 136 5.6E-93 T 12-10-2018 Acife_0332 00130705a19407da5fc30ba065c7de77 452 PRINTS PR01874 DNA repair protein radA signature 169 193 5.6E-93 T 12-10-2018 Acife_0332 00130705a19407da5fc30ba065c7de77 452 PRINTS PR01874 DNA repair protein radA signature 78 106 5.6E-93 T 12-10-2018 Acife_0332 00130705a19407da5fc30ba065c7de77 452 PRINTS PR01874 DNA repair protein radA signature 208 236 5.6E-93 T 12-10-2018 Acife_0332 00130705a19407da5fc30ba065c7de77 452 PRINTS PR01874 DNA repair protein radA signature 317 340 5.6E-93 T 12-10-2018 Acife_0332 00130705a19407da5fc30ba065c7de77 452 PRINTS PR01874 DNA repair protein radA signature 243 269 5.6E-93 T 12-10-2018 Acife_0332 00130705a19407da5fc30ba065c7de77 452 PRINTS PR01874 DNA repair protein radA signature 10 34 5.6E-93 T 12-10-2018 Acife_0332 00130705a19407da5fc30ba065c7de77 452 SMART SM00382 86 239 2.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0332 00130705a19407da5fc30ba065c7de77 452 SUPERFAMILY SSF54211 250 449 3.79E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_0332 00130705a19407da5fc30ba065c7de77 452 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 445 3.3E-179 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Acife_0332 00130705a19407da5fc30ba065c7de77 452 Gene3D G3DSA:3.30.230.10 331 451 1.7E-15 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Acife_0332 00130705a19407da5fc30ba065c7de77 452 Pfam PF13541 Subunit ChlI of Mg-chelatase 341 423 1.3E-11 T 12-10-2018 Acife_0332 00130705a19407da5fc30ba065c7de77 452 Gene3D G3DSA:3.40.50.300 65 281 8.7E-38 T 12-10-2018 Acife_0332 00130705a19407da5fc30ba065c7de77 452 SUPERFAMILY SSF52540 66 286 1.33E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0332 00130705a19407da5fc30ba065c7de77 452 Hamap MF_01498 DNA repair protein RadA [radA]. 21 449 43.167 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Acife_1258 389483ec275cb719a4ffb918a50f0318 591 Gene3D G3DSA:2.60.40.3650 5 174 2.0E-54 T 12-10-2018 Acife_1258 389483ec275cb719a4ffb918a50f0318 591 Pfam PF05299 M61 glycyl aminopeptidase 264 380 1.1E-38 T 12-10-2018 IPR007963 Peptidase M61, catalytic domain Acife_1258 389483ec275cb719a4ffb918a50f0318 591 Gene3D G3DSA:1.10.390.60 175 445 6.2E-88 T 12-10-2018 Acife_1258 389483ec275cb719a4ffb918a50f0318 591 SUPERFAMILY SSF55486 197 410 2.93E-14 T 12-10-2018 Acife_1258 389483ec275cb719a4ffb918a50f0318 591 SUPERFAMILY SSF50156 481 569 5.61E-8 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Acife_1258 389483ec275cb719a4ffb918a50f0318 591 Pfam PF13180 PDZ domain 483 555 3.6E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_1258 389483ec275cb719a4ffb918a50f0318 591 PIRSF PIRSF016493 2 589 3.7E-182 T 12-10-2018 IPR024191 Peptidase M61 Acife_1258 389483ec275cb719a4ffb918a50f0318 591 Gene3D G3DSA:2.30.42.10 483 587 6.5E-13 T 12-10-2018 Acife_0490 72def4771580000d74c8ac1bc1591543 318 SUPERFAMILY SSF160240 231 302 4.58E-8 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Acife_0490 72def4771580000d74c8ac1bc1591543 318 Gene3D G3DSA:1.20.1510.10 31 224 2.2E-38 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Acife_0490 72def4771580000d74c8ac1bc1591543 318 SUPERFAMILY SSF161111 31 224 1.57E-48 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Acife_0490 72def4771580000d74c8ac1bc1591543 318 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 32 303 3.0E-73 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Acife_0490 72def4771580000d74c8ac1bc1591543 318 Pfam PF01545 Cation efflux family 36 221 3.5E-40 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Acife_3004 534b6c2c05259ef39bb31cbb2b5beff6 321 Gene3D G3DSA:1.10.150.20 179 254 1.9E-13 T 12-10-2018 Acife_3004 534b6c2c05259ef39bb31cbb2b5beff6 321 SMART SM00279 182 217 4.1E-9 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Acife_3004 534b6c2c05259ef39bb31cbb2b5beff6 321 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 182 234 1.4E-12 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Acife_3004 534b6c2c05259ef39bb31cbb2b5beff6 321 Gene3D G3DSA:3.40.50.1010 1 174 6.5E-30 T 12-10-2018 Acife_3004 534b6c2c05259ef39bb31cbb2b5beff6 321 SUPERFAMILY SSF47807 182 241 1.14E-13 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Acife_3004 534b6c2c05259ef39bb31cbb2b5beff6 321 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 157 2.1E-21 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Acife_3004 534b6c2c05259ef39bb31cbb2b5beff6 321 SMART SM00475 1 263 4.2E-13 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Acife_3004 534b6c2c05259ef39bb31cbb2b5beff6 321 SUPERFAMILY SSF88723 1 164 1.11E-24 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_2881 c04d8a9c6df7048ced935c0db507e142 306 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_2881 c04d8a9c6df7048ced935c0db507e142 306 SMART SM00382 32 212 2.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2881 c04d8a9c6df7048ced935c0db507e142 306 SUPERFAMILY SSF52540 4 230 4.52E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2881 c04d8a9c6df7048ced935c0db507e142 306 Pfam PF00005 ABC transporter 24 165 2.1E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_2881 c04d8a9c6df7048ced935c0db507e142 306 Gene3D G3DSA:3.40.50.300 1 235 2.5E-62 T 12-10-2018 Acife_0668 b2c9e57ecc3c3f93bbdef5aa7c103f79 704 Gene3D G3DSA:1.20.1260.30 2 145 3.1E-12 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Acife_0668 b2c9e57ecc3c3f93bbdef5aa7c103f79 704 SUPERFAMILY SSF53335 10 703 3.65E-108 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0668 b2c9e57ecc3c3f93bbdef5aa7c103f79 704 Pfam PF02384 N-6 DNA Methylase 153 436 1.7E-71 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Acife_0668 b2c9e57ecc3c3f93bbdef5aa7c103f79 704 Pfam PF12161 HsdM N-terminal domain 10 142 5.2E-12 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Acife_0668 b2c9e57ecc3c3f93bbdef5aa7c103f79 704 Gene3D G3DSA:3.40.50.150 153 448 3.8E-78 T 12-10-2018 Acife_0668 b2c9e57ecc3c3f93bbdef5aa7c103f79 704 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 313 337 3.6E-16 T 12-10-2018 Acife_0668 b2c9e57ecc3c3f93bbdef5aa7c103f79 704 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 273 285 3.6E-16 T 12-10-2018 Acife_0668 b2c9e57ecc3c3f93bbdef5aa7c103f79 704 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 176 192 3.6E-16 T 12-10-2018 Acife_0668 b2c9e57ecc3c3f93bbdef5aa7c103f79 704 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 199 213 3.6E-16 T 12-10-2018 Acife_2394 15b66a38ecfa61cabf3cb4625c082083 264 Gene3D G3DSA:3.10.290.10 22 76 3.5E-12 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Acife_2394 15b66a38ecfa61cabf3cb4625c082083 264 SUPERFAMILY SSF55120 66 251 2.88E-39 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2394 15b66a38ecfa61cabf3cb4625c082083 264 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 117 131 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Acife_2394 15b66a38ecfa61cabf3cb4625c082083 264 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 85 241 1.7E-42 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Acife_2394 15b66a38ecfa61cabf3cb4625c082083 264 Pfam PF01479 S4 domain 22 57 2.7E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2394 15b66a38ecfa61cabf3cb4625c082083 264 Pfam PF00849 RNA pseudouridylate synthase 81 212 2.5E-18 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2394 15b66a38ecfa61cabf3cb4625c082083 264 Gene3D G3DSA:3.30.70.1560 141 231 2.7E-48 T 12-10-2018 Acife_2394 15b66a38ecfa61cabf3cb4625c082083 264 SMART SM00363 20 80 0.0037 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2394 15b66a38ecfa61cabf3cb4625c082083 264 SUPERFAMILY SSF55174 18 86 2.86E-9 T 12-10-2018 Acife_2394 15b66a38ecfa61cabf3cb4625c082083 264 Gene3D G3DSA:3.30.70.580 83 239 2.7E-48 T 12-10-2018 Acife_1212 2fd73a0a2762e75446a9055af5e4d37b 275 SUPERFAMILY SSF54675 5 107 1.33E-30 T 12-10-2018 Acife_1212 2fd73a0a2762e75446a9055af5e4d37b 275 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 273 7.7E-97 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Acife_1212 2fd73a0a2762e75446a9055af5e4d37b 275 SUPERFAMILY SSF51690 109 273 7.85E-58 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Acife_1212 2fd73a0a2762e75446a9055af5e4d37b 275 Gene3D G3DSA:3.90.1170.20 5 273 1.6E-109 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Acife_1212 2fd73a0a2762e75446a9055af5e4d37b 275 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 106 3.0E-26 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Acife_1212 2fd73a0a2762e75446a9055af5e4d37b 275 PIRSF PIRSF006250 1 275 7.4E-98 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Acife_1212 2fd73a0a2762e75446a9055af5e4d37b 275 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 109 273 2.1E-57 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Acife_1212 2fd73a0a2762e75446a9055af5e4d37b 275 Gene3D G3DSA:3.20.20.70 117 264 1.6E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_0049 c34a650da4c1b13b33b519143814368f 142 Pfam PF00293 NUDIX domain 21 120 3.6E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Acife_0049 c34a650da4c1b13b33b519143814368f 142 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Acife_0049 c34a650da4c1b13b33b519143814368f 142 SUPERFAMILY SSF55811 8 139 2.3E-25 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Acife_0049 c34a650da4c1b13b33b519143814368f 142 Gene3D G3DSA:3.90.79.10 19 142 8.2E-21 T 12-10-2018 Acife_3158 1d3f6be933f07f871738d6e82d769464 865 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 312 470 8.2E-40 T 12-10-2018 IPR000160 GGDEF domain Acife_3158 1d3f6be933f07f871738d6e82d769464 865 SMART SM00267 303 475 4.1E-52 T 12-10-2018 IPR000160 GGDEF domain Acife_3158 1d3f6be933f07f871738d6e82d769464 865 Gene3D G3DSA:3.30.70.270 309 473 1.9E-52 T 12-10-2018 Acife_3158 1d3f6be933f07f871738d6e82d769464 865 Gene3D G3DSA:3.20.20.450 492 743 1.8E-69 T 12-10-2018 IPR035919 EAL domain superfamily Acife_3158 1d3f6be933f07f871738d6e82d769464 865 Pfam PF00990 Diguanylate cyclase, GGDEF domain 314 466 5.6E-44 T 12-10-2018 IPR000160 GGDEF domain Acife_3158 1d3f6be933f07f871738d6e82d769464 865 SUPERFAMILY SSF55073 319 467 3.69E-45 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_3158 1d3f6be933f07f871738d6e82d769464 865 SMART SM00052 489 733 1.6E-64 T 12-10-2018 IPR001633 EAL domain Acife_3158 1d3f6be933f07f871738d6e82d769464 865 Pfam PF00563 EAL domain 495 728 5.8E-58 T 12-10-2018 IPR001633 EAL domain Acife_3158 1d3f6be933f07f871738d6e82d769464 865 SUPERFAMILY SSF141868 495 741 1.09E-61 T 12-10-2018 IPR035919 EAL domain superfamily Acife_2785 ea22441717c89dd435c037b2df22def0 389 Pfam PF00155 Aminotransferase class I and II 47 385 2.8E-60 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Acife_2785 ea22441717c89dd435c037b2df22def0 389 SUPERFAMILY SSF53383 11 389 8.55E-103 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_2785 ea22441717c89dd435c037b2df22def0 389 Gene3D G3DSA:3.90.1150.10 47 381 2.2E-125 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_2785 ea22441717c89dd435c037b2df22def0 389 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 39 385 1.3E-131 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Acife_2785 ea22441717c89dd435c037b2df22def0 389 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 389 46.111 T 12-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Acife_2785 ea22441717c89dd435c037b2df22def0 389 Gene3D G3DSA:3.40.640.10 63 293 2.2E-125 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_2785 ea22441717c89dd435c037b2df22def0 389 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 242 251 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Acife_2367 5b46c93d29a1efe59bbdd2856515b64c 409 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 263 1.1E-63 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 Acife_2367 5b46c93d29a1efe59bbdd2856515b64c 409 SUPERFAMILY SSF56300 1 344 1.07E-61 T 12-10-2018 Acife_2367 5b46c93d29a1efe59bbdd2856515b64c 409 Pfam PF00149 Calcineurin-like phosphoesterase 1 99 2.2E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Acife_2367 5b46c93d29a1efe59bbdd2856515b64c 409 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 285 380 1.8E-20 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain Acife_2367 5b46c93d29a1efe59bbdd2856515b64c 409 Gene3D G3DSA:3.30.160.720 286 347 1.5E-7 T 12-10-2018 Acife_2367 5b46c93d29a1efe59bbdd2856515b64c 409 Gene3D G3DSA:3.60.21.10 1 285 5.7E-89 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Acife_0736 e36bbf0d1bc8ae99b4afde13d4ea3515 120 Pfam PF03259 Roadblock/LC7 domain 12 95 7.9E-9 T 12-10-2018 IPR004942 Roadblock/LAMTOR2 domain Acife_0736 e36bbf0d1bc8ae99b4afde13d4ea3515 120 SUPERFAMILY SSF103196 4 120 7.5E-21 T 12-10-2018 Acife_0736 e36bbf0d1bc8ae99b4afde13d4ea3515 120 SMART SM00960 6 96 1.7E-10 T 12-10-2018 IPR004942 Roadblock/LAMTOR2 domain Acife_0736 e36bbf0d1bc8ae99b4afde13d4ea3515 120 Gene3D G3DSA:3.30.450.30 2 120 1.6E-23 T 12-10-2018 Acife_0328 74ad368e3a893a1215638936fab7810b 305 Pfam PF09991 Predicted membrane protein (DUF2232) 24 291 2.5E-20 T 12-10-2018 IPR018710 Protein of unknown function DUF2232 Acife_0227 d327a2b8360a8ec62f9dd80e47e0d5a9 125 Gene3D G3DSA:1.10.10.10 2 124 9.4E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0227 d327a2b8360a8ec62f9dd80e47e0d5a9 125 SUPERFAMILY SSF46785 8 115 1.52E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0227 d327a2b8360a8ec62f9dd80e47e0d5a9 125 Pfam PF01638 HxlR-like helix-turn-helix 20 108 1.7E-22 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type Acife_0713 1242eafb4a6fec98e2fa057a9f9998a4 382 Pfam PF06114 IrrE N-terminal-like domain 161 285 1.2E-18 T 12-10-2018 IPR010359 IrrE N-terminal-like domain Acife_0713 1242eafb4a6fec98e2fa057a9f9998a4 382 SUPERFAMILY SSF47413 6 70 5.91E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_0713 1242eafb4a6fec98e2fa057a9f9998a4 382 Pfam PF01381 Helix-turn-helix 12 64 2.3E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_0713 1242eafb4a6fec98e2fa057a9f9998a4 382 Gene3D G3DSA:1.10.260.40 6 70 2.1E-7 T 12-10-2018 Acife_0713 1242eafb4a6fec98e2fa057a9f9998a4 382 Gene3D G3DSA:3.40.390.50 132 250 2.5E-7 T 12-10-2018 Acife_0713 1242eafb4a6fec98e2fa057a9f9998a4 382 SMART SM00530 11 66 1.0E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_1750 838f3e1618321c1e48ac56de04c16231 416 Gene3D G3DSA:1.20.1250.20 229 415 5.2E-11 T 12-10-2018 Acife_1750 838f3e1618321c1e48ac56de04c16231 416 Gene3D G3DSA:1.20.1250.20 12 214 3.4E-24 T 12-10-2018 Acife_1750 838f3e1618321c1e48ac56de04c16231 416 Pfam PF07690 Major Facilitator Superfamily 29 230 6.1E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_1750 838f3e1618321c1e48ac56de04c16231 416 SUPERFAMILY SSF103473 15 415 6.93E-48 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_1152 9fc61529c7aec61afbcaeeec33b9ce4b 135 Gene3D G3DSA:3.40.50.1010 2 134 2.0E-40 T 12-10-2018 Acife_1152 9fc61529c7aec61afbcaeeec33b9ce4b 135 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 132 11.312 T 12-10-2018 IPR022907 VapC family GO:0004540 Acife_1152 9fc61529c7aec61afbcaeeec33b9ce4b 135 Pfam PF01850 PIN domain 5 126 9.6E-18 T 12-10-2018 IPR002716 PIN domain Acife_1152 9fc61529c7aec61afbcaeeec33b9ce4b 135 SUPERFAMILY SSF88723 2 133 1.79E-34 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_1411 b7d9a5229f695fbb4c2d30da0698792f 489 Gene3D G3DSA:1.40.20.10 211 486 2.0E-26 T 12-10-2018 IPR038186 CHAD domain superfamily Acife_1411 b7d9a5229f695fbb4c2d30da0698792f 489 Pfam PF05235 CHAD domain 235 442 1.6E-24 T 12-10-2018 IPR007899 CHAD domain Acife_1411 b7d9a5229f695fbb4c2d30da0698792f 489 SUPERFAMILY SSF55154 1 205 4.36E-31 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Acife_1411 b7d9a5229f695fbb4c2d30da0698792f 489 Pfam PF01928 CYTH domain 32 195 2.8E-19 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Acife_1411 b7d9a5229f695fbb4c2d30da0698792f 489 SMART SM00880 230 474 1.5E-12 T 12-10-2018 IPR007899 CHAD domain Acife_1411 b7d9a5229f695fbb4c2d30da0698792f 489 Gene3D G3DSA:2.40.320.10 1 197 6.2E-25 T 12-10-2018 Acife_1411 b7d9a5229f695fbb4c2d30da0698792f 489 SMART SM01118 1 202 1.0E-22 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2355 2780 9.3E-120 T 12-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 Gene3D G3DSA:1.50.10.140 986 1128 1.3E-13 T 12-10-2018 Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 SMART SM01068 2062 2127 4.4E-30 T 12-10-2018 IPR009342 Putative carbohydrate binding domain Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 SMART SM01068 1555 1616 6.0E-17 T 12-10-2018 IPR009342 Putative carbohydrate binding domain Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 Gene3D G3DSA:1.50.10.140 1349 1537 6.7E-7 T 12-10-2018 Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 Gene3D G3DSA:2.70.98.40 1565 1861 8.3E-89 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 Gene3D G3DSA:2.70.98.40 2064 2360 3.0E-97 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 Pfam PF10091 Putative glucoamylase 1336 1509 3.2E-14 T 12-10-2018 IPR019282 Domain of unknown function DUF2329 Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 Gene3D G3DSA:1.50.10.10 2369 2781 2.0E-197 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 SUPERFAMILY SSF48208 2330 2855 5.71E-100 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 SUPERFAMILY SSF74650 1566 1831 8.47E-78 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 Pfam PF06165 Glycosyltransferase family 36 2085 2324 1.5E-78 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 Pfam PF06165 Glycosyltransferase family 36 1579 1829 8.3E-77 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 SUPERFAMILY SSF74650 2062 2326 4.39E-84 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Acife_0024 0a7cbaafd62ad07100172e9e4ac013fe 2856 Gene3D G3DSA:2.60.420.10 2365 2843 2.0E-197 T 12-10-2018 Acife_0106 b121f191d78f7500e924b7f8f2479a63 799 Pfam PF07715 TonB-dependent Receptor Plug Domain 83 191 2.5E-6 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Acife_0106 b121f191d78f7500e924b7f8f2479a63 799 Pfam PF00593 TonB dependent receptor 329 797 5.5E-30 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Acife_0106 b121f191d78f7500e924b7f8f2479a63 799 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 782 799 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site Acife_0106 b121f191d78f7500e924b7f8f2479a63 799 Gene3D G3DSA:2.170.130.10 79 212 4.8E-8 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Acife_0106 b121f191d78f7500e924b7f8f2479a63 799 SUPERFAMILY SSF56935 76 799 7.69E-66 T 12-10-2018 Acife_0106 b121f191d78f7500e924b7f8f2479a63 799 Gene3D G3DSA:2.40.170.20 219 799 1.8E-47 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Acife_2838 8bf952b6773c2d01421702a2ab558f0a 354 Gene3D G3DSA:3.30.1330.40 226 351 2.1E-14 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Acife_2838 8bf952b6773c2d01421702a2ab558f0a 354 SUPERFAMILY SSF55298 218 348 1.51E-10 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Acife_2062 b73a05395475fe3dc3a3228f01e8e073 307 SUPERFAMILY SSF53850 90 293 9.31E-33 T 12-10-2018 Acife_2062 b73a05395475fe3dc3a3228f01e8e073 307 SUPERFAMILY SSF46785 1 110 1.38E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2062 b73a05395475fe3dc3a3228f01e8e073 307 Pfam PF03466 LysR substrate binding domain 89 292 2.8E-35 T 12-10-2018 IPR005119 LysR, substrate-binding Acife_2062 b73a05395475fe3dc3a3228f01e8e073 307 Gene3D G3DSA:3.40.190.10 91 289 1.6E-34 T 12-10-2018 Acife_2062 b73a05395475fe3dc3a3228f01e8e073 307 Gene3D G3DSA:1.10.10.10 1 80 1.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2062 b73a05395475fe3dc3a3228f01e8e073 307 Gene3D G3DSA:3.40.190.10 166 267 1.6E-34 T 12-10-2018 Acife_2062 b73a05395475fe3dc3a3228f01e8e073 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.0E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_1530 6371c0209a28394ab90016bbdd619f58 587 SUPERFAMILY SSF52540 311 557 1.69E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1530 6371c0209a28394ab90016bbdd619f58 587 Gene3D G3DSA:3.40.50.300 310 583 8.0E-73 T 12-10-2018 Acife_1530 6371c0209a28394ab90016bbdd619f58 587 Pfam PF02374 Anion-transporting ATPase 329 469 1.5E-31 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Acife_1530 6371c0209a28394ab90016bbdd619f58 587 Pfam PF02374 Anion-transporting ATPase 10 291 3.5E-80 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Acife_1530 6371c0209a28394ab90016bbdd619f58 587 Pfam PF02374 Anion-transporting ATPase 478 582 7.4E-9 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Acife_1530 6371c0209a28394ab90016bbdd619f58 587 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 7 572 3.9E-277 T 12-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 Acife_1530 6371c0209a28394ab90016bbdd619f58 587 Gene3D G3DSA:3.40.50.300 1 295 7.6E-86 T 12-10-2018 Acife_1530 6371c0209a28394ab90016bbdd619f58 587 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 12 292 1.5E-86 T 12-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 Acife_1530 6371c0209a28394ab90016bbdd619f58 587 PIRSF PIRSF001327 1 585 2.0E-264 T 12-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 Acife_1530 6371c0209a28394ab90016bbdd619f58 587 SUPERFAMILY SSF52540 6 280 5.04E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1530 6371c0209a28394ab90016bbdd619f58 587 SMART SM00382 7 226 0.43 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1530 6371c0209a28394ab90016bbdd619f58 587 SMART SM00382 326 519 0.074 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0196 14e7e61cb78deda6a6923c0d27e75219 151 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 106 115 2.7E-8 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Acife_0196 14e7e61cb78deda6a6923c0d27e75219 151 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 97 105 2.7E-8 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Acife_0196 14e7e61cb78deda6a6923c0d27e75219 151 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 8 22 2.7E-8 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Acife_0196 14e7e61cb78deda6a6923c0d27e75219 151 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 5 117 1.1E-30 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Acife_0196 14e7e61cb78deda6a6923c0d27e75219 151 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 5 119 5.0E-35 T 12-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L Acife_0196 14e7e61cb78deda6a6923c0d27e75219 151 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 5 144 20.851 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Acife_0196 14e7e61cb78deda6a6923c0d27e75219 151 SUPERFAMILY SSF81330 15 135 1.26E-31 T 12-10-2018 IPR036019 Gated mechanosensitive channel Acife_0196 14e7e61cb78deda6a6923c0d27e75219 151 Gene3D G3DSA:1.10.1200.120 5 130 2.1E-30 T 12-10-2018 IPR036019 Gated mechanosensitive channel Acife_0078 75211fa924562861a4b6ce5a32706c9b 358 Gene3D G3DSA:3.40.50.620 213 357 5.1E-33 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_0078 75211fa924562861a4b6ce5a32706c9b 358 SUPERFAMILY SSF53697 6 189 3.84E-49 T 12-10-2018 Acife_0078 75211fa924562861a4b6ce5a32706c9b 358 SUPERFAMILY SSF52374 222 352 4.22E-22 T 12-10-2018 Acife_0078 75211fa924562861a4b6ce5a32706c9b 358 Gene3D G3DSA:3.40.50.10490 2 199 3.7E-67 T 12-10-2018 Acife_0078 75211fa924562861a4b6ce5a32706c9b 358 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 34.083 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Acife_0078 75211fa924562861a4b6ce5a32706c9b 358 Pfam PF13580 SIS domain 22 146 1.5E-29 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Acife_0078 75211fa924562861a4b6ce5a32706c9b 358 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 224 289 5.2E-11 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Acife_0078 75211fa924562861a4b6ce5a32706c9b 358 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 220 354 3.1E-58 T 12-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Acife_0078 75211fa924562861a4b6ce5a32706c9b 358 Pfam PF01467 Cytidylyltransferase-like 226 317 6.1E-13 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Acife_1973 3b3d6cb67c034e5902d94f24cfac001c 205 Pfam PF07758 Protein of unknown function (DUF1614) 33 150 7.3E-7 T 12-10-2018 IPR011672 Protein of unknown function DUF1614 Acife_2245 66a177f18565df412941db7316410667 78 SMART SM00966 7 49 1.1E-4 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_2245 66a177f18565df412941db7316410667 78 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 53 2.4E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_2245 66a177f18565df412941db7316410667 78 SUPERFAMILY SSF89447 2 69 2.14E-13 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_2245 66a177f18565df412941db7316410667 78 Gene3D G3DSA:2.10.260.10 1 78 1.5E-16 T 12-10-2018 Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 Gene3D G3DSA:2.40.40.20 751 916 7.0E-23 T 12-10-2018 Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 SUPERFAMILY SSF50692 769 922 8.36E-29 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 Pfam PF00384 Molybdopterin oxidoreductase 71 583 2.5E-27 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 Gene3D G3DSA:3.40.228.10 154 257 9.1E-40 T 12-10-2018 Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 SMART SM00926 13 67 3.4E-19 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 Gene3D G3DSA:3.40.228.10 312 425 3.7E-11 T 12-10-2018 Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 SUPERFAMILY SSF53706 13 748 2.88E-135 T 12-10-2018 Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 Pfam PF01568 Molydopterin dinucleotide binding domain 775 854 7.9E-9 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 66 4.5E-15 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 Gene3D G3DSA:3.40.50.740 72 153 9.1E-40 T 12-10-2018 Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 Gene3D G3DSA:3.40.50.740 460 642 7.5E-14 T 12-10-2018 Acife_2483 ba91ed01daefa5e4ad6b41c1dfc0ecf5 952 Gene3D G3DSA:2.20.25.90 8 71 1.8E-16 T 12-10-2018 Acife_3231 a016ac5b20716be36798453e907dc826 910 SUPERFAMILY SSF53756 191 561 3.84E-36 T 12-10-2018 Acife_3231 a016ac5b20716be36798453e907dc826 910 Gene3D G3DSA:3.40.50.2000 366 543 1.3E-27 T 12-10-2018 Acife_3231 a016ac5b20716be36798453e907dc826 910 Pfam PF05045 Rhamnan synthesis protein F 665 897 4.0E-50 T 12-10-2018 IPR007739 Rhamnan synthesis F Acife_3231 a016ac5b20716be36798453e907dc826 910 Pfam PF00534 Glycosyl transferases group 1 374 541 4.2E-16 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_2918 908e6d384181efe77a0ec1696bfd002f 424 Gene3D G3DSA:3.65.10.10 21 229 5.4E-165 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Acife_2918 908e6d384181efe77a0ec1696bfd002f 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.0E-176 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2918 908e6d384181efe77a0ec1696bfd002f 424 Gene3D G3DSA:3.65.10.10 7 413 5.4E-165 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Acife_2918 908e6d384181efe77a0ec1696bfd002f 424 SUPERFAMILY SSF55205 1 417 1.57E-139 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Acife_2918 908e6d384181efe77a0ec1696bfd002f 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 406 1.3E-106 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Acife_2918 908e6d384181efe77a0ec1696bfd002f 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.571 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2877 e850fe82e81c643487899abfe968eea2 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 8 262 53.351 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Acife_2877 e850fe82e81c643487899abfe968eea2 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 40 67 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Acife_2877 e850fe82e81c643487899abfe968eea2 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 260 2.9E-78 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Acife_2877 e850fe82e81c643487899abfe968eea2 268 Gene3D G3DSA:1.10.8.100 200 264 4.4E-18 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Acife_2877 e850fe82e81c643487899abfe968eea2 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 10 259 4.5E-59 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Acife_2877 e850fe82e81c643487899abfe968eea2 268 Gene3D G3DSA:3.40.50.150 1 197 6.1E-65 T 12-10-2018 Acife_2877 e850fe82e81c643487899abfe968eea2 268 SUPERFAMILY SSF53335 8 262 1.96E-73 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2877 e850fe82e81c643487899abfe968eea2 268 SMART SM00650 24 195 3.5E-74 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Acife_0783 38c7e555607b31a3a50e45fb0eae835d 197 Gene3D G3DSA:3.40.50.1240 1 192 9.8E-49 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Acife_0783 38c7e555607b31a3a50e45fb0eae835d 197 SMART SM00855 5 149 4.4E-16 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Acife_0783 38c7e555607b31a3a50e45fb0eae835d 197 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 187 1.7E-41 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Acife_0783 38c7e555607b31a3a50e45fb0eae835d 197 PIRSF PIRSF000709 1 189 2.5E-8 T 12-10-2018 Acife_0783 38c7e555607b31a3a50e45fb0eae835d 197 SUPERFAMILY SSF53254 1 191 3.87E-42 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 SMART SM00388 289 358 4.5E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 SUPERFAMILY SSF55874 347 512 9.3E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 357 2.5E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 SMART SM00387 402 514 3.3E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 SMART SM00304 236 288 8.2E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 Gene3D G3DSA:1.20.1480.50 196 287 3.4E-7 T 12-10-2018 Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 SUPERFAMILY SSF47384 274 356 5.3E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 513 1.0E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 Gene3D G3DSA:1.10.287.130 288 357 1.7E-15 T 12-10-2018 Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 SUPERFAMILY SSF158472 237 284 3.79E-5 T 12-10-2018 Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 5.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 511 5.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 492 5.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2892 68ce95e68a356ad212bb7efe2b34c351 546 Gene3D G3DSA:3.30.565.10 364 518 7.1E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 SUPERFAMILY SSF52374 3 297 1.05E-113 T 12-10-2018 Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 SUPERFAMILY SSF48163 298 462 6.02E-37 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 Gene3D G3DSA:1.10.10.350 371 466 7.2E-22 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 9.7E-26 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 9.7E-26 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 9.7E-26 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 9.7E-26 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 9.7E-26 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 461 9.9E-170 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 Gene3D G3DSA:3.40.50.620 1 313 1.9E-135 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 304 1.4E-106 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Acife_0625 6b138e252daa2b97f533eb1779d1ee08 466 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 463 32.444 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Acife_3035 264b81038fce523eba9ae0b367d0d0c9 79 SUPERFAMILY SSF89447 1 71 7.67E-15 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_3035 264b81038fce523eba9ae0b367d0d0c9 79 SMART SM00966 6 48 1.6E-4 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_3035 264b81038fce523eba9ae0b367d0d0c9 79 Gene3D G3DSA:2.10.260.10 1 78 6.7E-23 T 12-10-2018 Acife_3035 264b81038fce523eba9ae0b367d0d0c9 79 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 45 1.8E-6 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_2663 9a5cf8d859690e6cff343e6363510482 362 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 12-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 Acife_2663 9a5cf8d859690e6cff343e6363510482 362 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 15 169 2.1E-38 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2663 9a5cf8d859690e6cff343e6363510482 362 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 190 341 1.9E-12 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2663 9a5cf8d859690e6cff343e6363510482 362 SUPERFAMILY SSF55120 15 348 2.88E-81 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2663 9a5cf8d859690e6cff343e6363510482 362 Gene3D G3DSA:3.30.2340.10 168 310 4.6E-105 T 12-10-2018 Acife_2663 9a5cf8d859690e6cff343e6363510482 362 Gene3D G3DSA:3.30.2350.20 18 345 4.6E-105 T 12-10-2018 Acife_2663 9a5cf8d859690e6cff343e6363510482 362 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 351 24.595 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2601 04ab21d4ee79190bcb1fe26dfe1ad6d3 311 Pfam PF07682 Sulphur oxygenase reductase 5 306 4.1E-131 T 12-10-2018 IPR011661 Sulphur oxygenase reductase KEGG: 00920+1.13.11.55|MetaCyc: PWY-5302 Acife_2601 04ab21d4ee79190bcb1fe26dfe1ad6d3 311 SUPERFAMILY SSF54909 4 308 1.72E-80 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Acife_1390 9a30cadb1dfc28f14bc999f4fd298375 365 Gene3D G3DSA:3.40.640.10 49 273 1.2E-111 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1390 9a30cadb1dfc28f14bc999f4fd298375 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 364 1.5E-99 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Acife_1390 9a30cadb1dfc28f14bc999f4fd298375 365 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 225 234 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Acife_1390 9a30cadb1dfc28f14bc999f4fd298375 365 Gene3D G3DSA:3.90.1150.10 27 358 1.2E-111 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1390 9a30cadb1dfc28f14bc999f4fd298375 365 SUPERFAMILY SSF53383 13 361 1.16E-79 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_1390 9a30cadb1dfc28f14bc999f4fd298375 365 Pfam PF00155 Aminotransferase class I and II 36 354 6.2E-53 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Acife_1390 9a30cadb1dfc28f14bc999f4fd298375 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 365 57.2 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 Gene3D G3DSA:2.60.120.260 1044 1184 3.2E-19 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 PRINTS PR01439 Cellulose synthase subunit A signature 51 71 8.3E-47 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 PRINTS PR01439 Cellulose synthase subunit A signature 380 406 8.3E-47 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 PRINTS PR01439 Cellulose synthase subunit A signature 138 157 8.3E-47 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 PRINTS PR01439 Cellulose synthase subunit A signature 449 468 8.3E-47 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 PRINTS PR01439 Cellulose synthase subunit A signature 219 243 8.3E-47 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 PRINTS PR01439 Cellulose synthase subunit A signature 523 544 8.3E-47 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 PRINTS PR01439 Cellulose synthase subunit A signature 409 428 8.3E-47 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 3 680 1.7E-256 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 Pfam PF00535 Glycosyl transferase family 2 132 303 8.3E-36 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 SUPERFAMILY SSF53448 131 411 2.81E-52 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 Pfam PF07238 PilZ domain 550 645 6.8E-10 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 Gene3D G3DSA:2.60.120.260 753 879 4.5E-25 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 Gene3D G3DSA:2.40.10.220 546 653 2.8E-11 T 12-10-2018 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 SUPERFAMILY SSF141371 552 644 3.53E-8 T 12-10-2018 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 Pfam PF03170 Bacterial cellulose synthase subunit 750 1354 1.1E-173 T 12-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 Acife_1586 cca7a61d50f363c053f6f46932d7d145 1457 Gene3D G3DSA:3.90.550.10 118 339 7.6E-80 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0807 ff52781359e862263bce196203bd7149 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 378 384 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Acife_0807 ff52781359e862263bce196203bd7149 688 Gene3D G3DSA:3.40.1110.10 387 505 8.2E-94 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_0807 ff52781359e862263bce196203bd7149 688 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 115 680 3.1E-182 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Acife_0807 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 226 240 1.0E-29 T 12-10-2018 Acife_0807 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 530 1.0E-29 T 12-10-2018 Acife_0807 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 573 592 1.0E-29 T 12-10-2018 Acife_0807 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 376 390 1.0E-29 T 12-10-2018 Acife_0807 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 608 1.0E-29 T 12-10-2018 Acife_0807 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 509 1.0E-29 T 12-10-2018 Acife_0807 ff52781359e862263bce196203bd7149 688 Gene3D G3DSA:3.40.50.1000 370 623 8.2E-94 T 12-10-2018 IPR023214 HAD superfamily Acife_0807 ff52781359e862263bce196203bd7149 688 SUPERFAMILY SSF81653 179 276 9.42E-26 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Acife_0807 ff52781359e862263bce196203bd7149 688 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 144 681 1.7E-111 T 12-10-2018 Acife_0807 ff52781359e862263bce196203bd7149 688 SUPERFAMILY SSF56784 375 678 2.86E-56 T 12-10-2018 IPR036412 HAD-like superfamily Acife_0807 ff52781359e862263bce196203bd7149 688 Pfam PF00122 E1-E2 ATPase 177 356 8.4E-50 T 12-10-2018 Acife_0807 ff52781359e862263bce196203bd7149 688 SUPERFAMILY SSF81665 116 644 4.05E-11 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Acife_0807 ff52781359e862263bce196203bd7149 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 373 587 4.0E-43 T 12-10-2018 Acife_0807 ff52781359e862263bce196203bd7149 688 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 573 589 4.8E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0807 ff52781359e862263bce196203bd7149 688 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 545 561 4.8E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0807 ff52781359e862263bce196203bd7149 688 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 604 629 4.8E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0807 ff52781359e862263bce196203bd7149 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 152 652 6.4E-89 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0807 ff52781359e862263bce196203bd7149 688 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 97 681 1.9E-186 T 12-10-2018 Acife_0807 ff52781359e862263bce196203bd7149 688 Gene3D G3DSA:2.70.150.20 164 280 4.1E-38 T 12-10-2018 Acife_0890 ff52781359e862263bce196203bd7149 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 378 384 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Acife_0890 ff52781359e862263bce196203bd7149 688 Gene3D G3DSA:3.40.1110.10 387 505 8.2E-94 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_0890 ff52781359e862263bce196203bd7149 688 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 115 680 3.1E-182 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Acife_0890 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 226 240 1.0E-29 T 12-10-2018 Acife_0890 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 530 1.0E-29 T 12-10-2018 Acife_0890 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 573 592 1.0E-29 T 12-10-2018 Acife_0890 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 376 390 1.0E-29 T 12-10-2018 Acife_0890 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 608 1.0E-29 T 12-10-2018 Acife_0890 ff52781359e862263bce196203bd7149 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 509 1.0E-29 T 12-10-2018 Acife_0890 ff52781359e862263bce196203bd7149 688 Gene3D G3DSA:3.40.50.1000 370 623 8.2E-94 T 12-10-2018 IPR023214 HAD superfamily Acife_0890 ff52781359e862263bce196203bd7149 688 SUPERFAMILY SSF81653 179 276 9.42E-26 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Acife_0890 ff52781359e862263bce196203bd7149 688 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 144 681 1.7E-111 T 12-10-2018 Acife_0890 ff52781359e862263bce196203bd7149 688 SUPERFAMILY SSF56784 375 678 2.86E-56 T 12-10-2018 IPR036412 HAD-like superfamily Acife_0890 ff52781359e862263bce196203bd7149 688 Pfam PF00122 E1-E2 ATPase 177 356 8.4E-50 T 12-10-2018 Acife_0890 ff52781359e862263bce196203bd7149 688 SUPERFAMILY SSF81665 116 644 4.05E-11 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Acife_0890 ff52781359e862263bce196203bd7149 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 373 587 4.0E-43 T 12-10-2018 Acife_0890 ff52781359e862263bce196203bd7149 688 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 573 589 4.8E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0890 ff52781359e862263bce196203bd7149 688 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 545 561 4.8E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0890 ff52781359e862263bce196203bd7149 688 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 604 629 4.8E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0890 ff52781359e862263bce196203bd7149 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 152 652 6.4E-89 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_0890 ff52781359e862263bce196203bd7149 688 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 97 681 1.9E-186 T 12-10-2018 Acife_0890 ff52781359e862263bce196203bd7149 688 Gene3D G3DSA:2.70.150.20 164 280 4.1E-38 T 12-10-2018 Acife_0007 42153c5d4fa0a37e50b0e26b7a5eef84 83 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 80 2.8E-28 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Acife_0007 42153c5d4fa0a37e50b0e26b7a5eef84 83 SUPERFAMILY SSF55229 33 82 4.18E-14 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Acife_0007 42153c5d4fa0a37e50b0e26b7a5eef84 83 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 82 18.023 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Acife_0007 42153c5d4fa0a37e50b0e26b7a5eef84 83 Pfam PF03776 Septum formation topological specificity factor MinE 14 79 5.9E-24 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Acife_0007 42153c5d4fa0a37e50b0e26b7a5eef84 83 Gene3D G3DSA:3.30.1070.10 1 81 4.5E-26 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Acife_0006 7f54b5833a47b6e38b0070dd60a7f24b 1169 Gene3D G3DSA:3.50.50.60 388 512 5.7E-6 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_0006 7f54b5833a47b6e38b0070dd60a7f24b 1169 SUPERFAMILY SSF63380 844 943 1.34E-10 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Acife_0006 7f54b5833a47b6e38b0070dd60a7f24b 1169 Gene3D G3DSA:2.40.30.10 841 943 3.7E-9 T 12-10-2018 Acife_0006 7f54b5833a47b6e38b0070dd60a7f24b 1169 SUPERFAMILY SSF51971 385 729 8.24E-18 T 12-10-2018 Acife_0006 7f54b5833a47b6e38b0070dd60a7f24b 1169 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 388 407 3.6E-7 T 12-10-2018 Acife_0006 7f54b5833a47b6e38b0070dd60a7f24b 1169 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 501 519 3.6E-7 T 12-10-2018 Acife_0006 7f54b5833a47b6e38b0070dd60a7f24b 1169 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 555 573 3.6E-7 T 12-10-2018 Acife_0006 7f54b5833a47b6e38b0070dd60a7f24b 1169 Gene3D G3DSA:3.50.50.60 513 615 5.7E-6 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_0006 7f54b5833a47b6e38b0070dd60a7f24b 1169 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 387 592 5.3E-9 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 PIRSF PIRSF000350 2 550 5.9E-236 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 SUPERFAMILY SSF55424 424 548 2.92E-31 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 Gene3D G3DSA:3.30.70.100 3 72 2.9E-17 T 12-10-2018 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 TIGRFAM TIGR02053 MerA: mercury(II) reductase 90 550 2.7E-167 T 12-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 Gene3D G3DSA:3.50.50.60 92 408 1.5E-105 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 PRINTS PR00945 Mercuric reductase class II signature 16 26 4.4E-63 T 12-10-2018 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 PRINTS PR00945 Mercuric reductase class II signature 135 154 4.4E-63 T 12-10-2018 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 PRINTS PR00945 Mercuric reductase class II signature 100 118 4.4E-63 T 12-10-2018 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 PRINTS PR00945 Mercuric reductase class II signature 523 542 4.4E-63 T 12-10-2018 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 PRINTS PR00945 Mercuric reductase class II signature 261 278 4.4E-63 T 12-10-2018 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 PRINTS PR00945 Mercuric reductase class II signature 458 478 4.4E-63 T 12-10-2018 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 PRINTS PR00945 Mercuric reductase class II signature 226 243 4.4E-63 T 12-10-2018 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 PRINTS PR00945 Mercuric reductase class II signature 281 296 4.4E-63 T 12-10-2018 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 Gene3D G3DSA:3.30.390.30 426 550 8.9E-41 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 90 407 4.0E-61 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 123 133 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 427 532 8.8E-26 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 Pfam PF00403 Heavy-metal-associated domain 9 65 1.4E-9 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 SUPERFAMILY SSF55008 5 71 8.77E-16 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 Gene3D G3DSA:3.50.50.60 234 350 1.5E-105 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2290 4188a6ca038a69c8e41c73857cc61ade 550 SUPERFAMILY SSF51905 89 445 1.12E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3125 47e7cff38a00c5391de562ceadb46538 108 SUPERFAMILY SSF54913 5 106 1.97E-18 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Acife_3125 47e7cff38a00c5391de562ceadb46538 108 Pfam PF00543 Nitrogen regulatory protein P-II 20 100 2.0E-4 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_3125 47e7cff38a00c5391de562ceadb46538 108 Gene3D G3DSA:3.30.70.120 1 108 4.4E-30 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Acife_2542 eabd8c586329e545d8330880952256e1 494 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 487 3.5E-194 T 12-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2542 eabd8c586329e545d8330880952256e1 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 8.6E-48 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2542 eabd8c586329e545d8330880952256e1 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 8.6E-48 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2542 eabd8c586329e545d8330880952256e1 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 325 344 8.6E-48 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2542 eabd8c586329e545d8330880952256e1 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 8.6E-48 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2542 eabd8c586329e545d8330880952256e1 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 137 156 8.6E-48 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2542 eabd8c586329e545d8330880952256e1 494 Pfam PF00361 Proton-conducting membrane transporter 131 415 6.5E-81 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2529 10235d4418fe130f451c0dff9dbab51e 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 54 104 7.0E-5 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Acife_2529 10235d4418fe130f451c0dff9dbab51e 177 Gene3D G3DSA:1.20.1290.10 14 177 4.2E-28 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Acife_2529 10235d4418fe130f451c0dff9dbab51e 177 SUPERFAMILY SSF69118 1 176 1.46E-36 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Acife_2167 2f0ec50420b9a0088576cbe069d0701b 1475 SUPERFAMILY SSF56235 15 429 1.74E-127 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Acife_2167 2f0ec50420b9a0088576cbe069d0701b 1475 Gene3D G3DSA:3.20.20.70 479 1167 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2167 2f0ec50420b9a0088576cbe069d0701b 1475 SUPERFAMILY SSF51395 448 1188 1.69E-243 T 12-10-2018 Acife_2167 2f0ec50420b9a0088576cbe069d0701b 1475 Pfam PF00310 Glutamine amidotransferases class-II 15 426 1.5E-148 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Acife_2167 2f0ec50420b9a0088576cbe069d0701b 1475 Pfam PF04898 Glutamate synthase central domain 454 735 1.6E-102 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Acife_2167 2f0ec50420b9a0088576cbe069d0701b 1475 Gene3D G3DSA:2.160.20.60 1187 1468 6.9E-103 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Acife_2167 2f0ec50420b9a0088576cbe069d0701b 1475 Gene3D G3DSA:3.20.20.70 431 790 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2167 2f0ec50420b9a0088576cbe069d0701b 1475 Pfam PF01493 GXGXG motif 1234 1419 1.5E-79 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Acife_2167 2f0ec50420b9a0088576cbe069d0701b 1475 SUPERFAMILY SSF69336 1211 1466 4.97E-87 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Acife_2167 2f0ec50420b9a0088576cbe069d0701b 1475 Gene3D G3DSA:3.60.20.10 15 541 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Acife_2167 2f0ec50420b9a0088576cbe069d0701b 1475 Pfam PF01645 Conserved region in glutamate synthase 791 1154 2.3E-151 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 SUPERFAMILY SSF50465 338 438 4.65E-31 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 Pfam PF00009 Elongation factor Tu GTP binding domain 20 226 2.2E-36 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 Pfam PF03143 Elongation factor Tu C-terminal domain 336 438 2.8E-5 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 Gene3D G3DSA:2.40.30.10 241 332 1.1E-23 T 12-10-2018 Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 20 437 1.2E-162 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 PRINTS PR00315 GTP-binding elongation factor signature 117 128 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 PRINTS PR00315 GTP-binding elongation factor signature 81 89 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 PRINTS PR00315 GTP-binding elongation factor signature 163 172 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 PRINTS PR00315 GTP-binding elongation factor signature 21 34 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 PRINTS PR00315 GTP-binding elongation factor signature 101 111 1.2E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 Gene3D G3DSA:2.40.30.10 336 438 1.3E-34 T 12-10-2018 Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 Gene3D G3DSA:3.40.50.300 5 239 3.3E-61 T 12-10-2018 Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 SUPERFAMILY SSF52540 17 255 2.41E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 SUPERFAMILY SSF50447 242 333 8.32E-20 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_2629 c2b422b5b4ec7f3c37e9962a6d92d244 450 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 74 89 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Acife_2921 86e098429f9b697a4e542a5c13e38bc6 359 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 19 357 3.3E-87 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Acife_2921 86e098429f9b697a4e542a5c13e38bc6 359 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 13 359 52.186 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Acife_2921 86e098429f9b697a4e542a5c13e38bc6 359 Gene3D G3DSA:3.40.640.10 55 268 1.3E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_2921 86e098429f9b697a4e542a5c13e38bc6 359 SUPERFAMILY SSF53383 18 358 6.4E-66 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_2921 86e098429f9b697a4e542a5c13e38bc6 359 Pfam PF00155 Aminotransferase class I and II 33 353 3.9E-41 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Acife_2921 86e098429f9b697a4e542a5c13e38bc6 359 Gene3D G3DSA:3.90.1150.10 21 353 1.3E-104 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1299 508e13925905e6ee2408a55a97abe764 186 Gene3D G3DSA:1.10.132.20 13 183 1.2E-64 T 12-10-2018 Acife_1299 508e13925905e6ee2408a55a97abe764 186 Pfam PF01765 Ribosome recycling factor 21 184 4.3E-58 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Acife_1299 508e13925905e6ee2408a55a97abe764 186 Gene3D G3DSA:3.30.1360.40 32 106 1.2E-64 T 12-10-2018 Acife_1299 508e13925905e6ee2408a55a97abe764 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 26.481 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Acife_1299 508e13925905e6ee2408a55a97abe764 186 SUPERFAMILY SSF55194 4 185 3.66E-66 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Acife_1299 508e13925905e6ee2408a55a97abe764 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 12 186 1.3E-64 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Acife_0326 509dbd0fa343835d03cb957a1068b908 134 Gene3D G3DSA:3.30.70.60 1 91 1.9E-31 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Acife_0326 509dbd0fa343835d03cb957a1068b908 134 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.437 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Acife_0326 509dbd0fa343835d03cb957a1068b908 134 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 92 1.1E-33 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0326 509dbd0fa343835d03cb957a1068b908 134 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 Acife_0326 509dbd0fa343835d03cb957a1068b908 134 SUPERFAMILY SSF54995 2 101 4.06E-35 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0326 509dbd0fa343835d03cb957a1068b908 134 Pfam PF01250 Ribosomal protein S6 3 90 1.5E-27 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0249 a4a8739e6d695f464faacae6cbec8b44 644 PIRSF PIRSF000549 1 644 8.2E-268 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 Acife_0249 a4a8739e6d695f464faacae6cbec8b44 644 SUPERFAMILY SSF52540 75 367 4.02E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0249 a4a8739e6d695f464faacae6cbec8b44 644 Pfam PF08298 PrkA AAA domain 20 379 1.6E-161 T 12-10-2018 IPR013153 PrkA AAA domain Acife_0249 a4a8739e6d695f464faacae6cbec8b44 644 SMART SM00763 19 380 1.3E-191 T 12-10-2018 IPR013153 PrkA AAA domain Acife_0249 a4a8739e6d695f464faacae6cbec8b44 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.0E-67 T 12-10-2018 IPR010650 PrkA C-terminal domain Acife_2130 83bca9bfa2d3b4978178ea3eb1228cb0 437 Gene3D G3DSA:3.30.565.10 279 431 2.2E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_2130 83bca9bfa2d3b4978178ea3eb1228cb0 437 Gene3D G3DSA:1.10.287.130 168 278 8.4E-19 T 12-10-2018 Acife_2130 83bca9bfa2d3b4978178ea3eb1228cb0 437 SUPERFAMILY SSF47384 201 280 8.44E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_2130 83bca9bfa2d3b4978178ea3eb1228cb0 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 2.9E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2130 83bca9bfa2d3b4978178ea3eb1228cb0 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 2.9E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2130 83bca9bfa2d3b4978178ea3eb1228cb0 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 2.9E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2130 83bca9bfa2d3b4978178ea3eb1228cb0 437 SUPERFAMILY SSF55874 271 422 3.27E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_2130 83bca9bfa2d3b4978178ea3eb1228cb0 437 SMART SM00387 325 435 2.6E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_2130 83bca9bfa2d3b4978178ea3eb1228cb0 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 425 1.3E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_2130 83bca9bfa2d3b4978178ea3eb1228cb0 437 SMART SM00388 217 282 3.9E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2130 83bca9bfa2d3b4978178ea3eb1228cb0 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 281 3.1E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2584 d654f0b2a5974ce0af175249765c425e 303 Pfam PF00892 EamA-like transporter family 13 141 1.6E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Acife_2584 d654f0b2a5974ce0af175249765c425e 303 Pfam PF00892 EamA-like transporter family 151 286 1.6E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Acife_2584 d654f0b2a5974ce0af175249765c425e 303 SUPERFAMILY SSF103481 189 289 1.57E-12 T 12-10-2018 Acife_2584 d654f0b2a5974ce0af175249765c425e 303 SUPERFAMILY SSF103481 44 144 2.62E-13 T 12-10-2018 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 SUPERFAMILY SSF102886 4 295 1.19E-130 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 Gene3D G3DSA:3.40.1500.10 1 296 1.1E-133 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 PIRSF PIRSF000166 1 296 1.2E-123 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 271 52.299 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 PRINTS PR00073 Coprogen oxidase signature 157 186 4.8E-84 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 PRINTS PR00073 Coprogen oxidase signature 31 47 4.8E-84 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 PRINTS PR00073 Coprogen oxidase signature 256 282 4.8E-84 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 PRINTS PR00073 Coprogen oxidase signature 90 114 4.8E-84 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 PRINTS PR00073 Coprogen oxidase signature 48 69 4.8E-84 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 PRINTS PR00073 Coprogen oxidase signature 120 142 4.8E-84 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 PRINTS PR00073 Coprogen oxidase signature 228 255 4.8E-84 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 161 185 - T 12-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1069 b5a43f63de6d74ac609e194712b6a17a 296 Pfam PF01218 Coproporphyrinogen III oxidase 9 295 3.1E-131 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_0584 811acb49698a62b9dad997ceb0f40357 598 Gene3D G3DSA:1.10.1370.20 226 598 6.6E-112 T 12-10-2018 Acife_0584 811acb49698a62b9dad997ceb0f40357 598 Gene3D G3DSA:1.20.140.70 46 172 1.3E-11 T 12-10-2018 Acife_0584 811acb49698a62b9dad997ceb0f40357 598 Pfam PF01432 Peptidase family M3 338 581 2.8E-30 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Acife_0584 811acb49698a62b9dad997ceb0f40357 598 SUPERFAMILY SSF55486 14 578 4.69E-95 T 12-10-2018 Acife_0584 811acb49698a62b9dad997ceb0f40357 598 Pfam PF08439 Oligopeptidase F 121 187 8.7E-16 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain Acife_1442 193c8af5de1b707fcf5dc7dfaba562a8 311 Gene3D G3DSA:3.40.366.10 7 285 3.8E-99 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Acife_1442 193c8af5de1b707fcf5dc7dfaba562a8 311 Pfam PF00698 Acyl transferase domain 7 278 2.7E-35 T 12-10-2018 IPR014043 Acyl transferase Acife_1442 193c8af5de1b707fcf5dc7dfaba562a8 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 291 5.8E-107 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Acife_1442 193c8af5de1b707fcf5dc7dfaba562a8 311 SUPERFAMILY SSF52151 5 310 7.59E-74 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Acife_1442 193c8af5de1b707fcf5dc7dfaba562a8 311 SUPERFAMILY SSF55048 131 198 1.57E-16 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Acife_1442 193c8af5de1b707fcf5dc7dfaba562a8 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 298 2.6E-36 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Acife_1442 193c8af5de1b707fcf5dc7dfaba562a8 311 Gene3D G3DSA:3.30.70.250 126 198 3.8E-99 T 12-10-2018 Acife_1442 193c8af5de1b707fcf5dc7dfaba562a8 311 PIRSF PIRSF000446 3 311 5.2E-111 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Gene3D G3DSA:2.40.50.100 106 205 3.3E-24 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Gene3D G3DSA:2.40.50.100 2 101 1.7E-20 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Gene3D G3DSA:3.50.50.60 659 784 5.0E-94 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 SUPERFAMILY SSF52777 286 498 3.78E-53 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 SUPERFAMILY SSF55424 860 971 9.28E-31 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Pfam PF02817 e3 binding domain 239 272 2.7E-9 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 513 838 2.0E-63 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 547 557 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 297 498 4.1E-49 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 136 165 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 774 790 1.5E-25 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 685 703 1.5E-25 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 514 533 1.5E-25 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 642 660 1.5E-25 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 803 825 1.5E-25 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 SUPERFAMILY SSF47005 233 274 9.02E-8 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Gene3D G3DSA:3.30.559.10 278 501 1.8E-55 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Gene3D G3DSA:3.30.390.30 858 973 1.4E-32 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 940 960 1.4E-48 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 645 654 1.4E-48 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 853 874 1.4E-48 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 546 561 1.4E-48 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 685 710 1.4E-48 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 818 825 1.4E-48 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 513 535 1.4E-48 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 918 933 1.4E-48 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 775 789 1.4E-48 T 12-10-2018 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 SUPERFAMILY SSF51905 509 848 8.19E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Pfam PF00364 Biotin-requiring enzyme 114 183 2.7E-13 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Pfam PF00364 Biotin-requiring enzyme 7 65 2.5E-10 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Gene3D G3DSA:4.10.320.10 235 275 3.8E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 SUPERFAMILY SSF51230 4 96 2.09E-19 T 12-10-2018 IPR011053 Single hybrid motif Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 860 965 4.0E-26 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 SUPERFAMILY SSF51230 112 197 1.19E-20 T 12-10-2018 IPR011053 Single hybrid motif Acife_3080 d83892c7d512780d3fb244f007ac7edb 981 Gene3D G3DSA:3.50.50.60 514 844 5.0E-94 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1753 59f7c7adfa79f8124891f13c0df757a3 323 Pfam PF00294 pfkB family carbohydrate kinase 18 307 2.3E-42 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Acife_1753 59f7c7adfa79f8124891f13c0df757a3 323 SUPERFAMILY SSF53613 19 316 4.68E-58 T 12-10-2018 IPR029056 Ribokinase-like Acife_1753 59f7c7adfa79f8124891f13c0df757a3 323 Gene3D G3DSA:3.40.1190.20 9 315 1.5E-113 T 12-10-2018 IPR029056 Ribokinase-like Acife_1753 59f7c7adfa79f8124891f13c0df757a3 323 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 58 81 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Acife_1753 59f7c7adfa79f8124891f13c0df757a3 323 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 13 316 2.4E-116 T 12-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Acife_2904 85c2ea11675715afabc2c93c78039108 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 5 240 2.4E-114 T 12-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Acife_2904 85c2ea11675715afabc2c93c78039108 241 Gene3D G3DSA:3.40.50.300 3 241 3.1E-69 T 12-10-2018 Acife_2904 85c2ea11675715afabc2c93c78039108 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_2904 85c2ea11675715afabc2c93c78039108 241 SUPERFAMILY SSF52540 4 236 1.27E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2904 85c2ea11675715afabc2c93c78039108 241 Pfam PF00005 ABC transporter 21 166 1.6E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_2904 85c2ea11675715afabc2c93c78039108 241 SMART SM00382 29 216 6.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2807 5c1dd9b092a4c4eb6b877ff4f8443ce6 575 Gene3D G3DSA:3.30.300.30 450 570 9.4E-7 T 12-10-2018 Acife_2807 5c1dd9b092a4c4eb6b877ff4f8443ce6 575 Pfam PF00501 AMP-binding enzyme 17 453 3.3E-93 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Acife_2807 5c1dd9b092a4c4eb6b877ff4f8443ce6 575 Gene3D G3DSA:3.40.50.12780 3 293 9.6E-50 T 12-10-2018 Acife_2807 5c1dd9b092a4c4eb6b877ff4f8443ce6 575 ProSitePatterns PS00455 Putative AMP-binding domain signature. 181 192 - T 12-10-2018 IPR020845 AMP-binding, conserved site Acife_2807 5c1dd9b092a4c4eb6b877ff4f8443ce6 575 Gene3D G3DSA:3.40.50.12780 314 447 3.4E-43 T 12-10-2018 Acife_2807 5c1dd9b092a4c4eb6b877ff4f8443ce6 575 SUPERFAMILY SSF56801 8 571 9.68E-120 T 12-10-2018 Acife_3086 519ac6296f493edc7a50ed195b44a726 128 ProSitePatterns PS00360 Ribosomal protein S9 signature. 67 85 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Acife_3086 519ac6296f493edc7a50ed195b44a726 128 Pfam PF00380 Ribosomal protein S9/S16 8 128 2.3E-45 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Acife_3086 519ac6296f493edc7a50ed195b44a726 128 SUPERFAMILY SSF54211 3 128 3.45E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_3086 519ac6296f493edc7a50ed195b44a726 128 Gene3D G3DSA:3.30.230.10 1 128 4.4E-51 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Acife_3086 519ac6296f493edc7a50ed195b44a726 128 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 128 30.477 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Acife_2211 9d27acd6fb604032f6f87402ba2b4919 202 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 51 193 2.8E-30 T 12-10-2018 IPR023473 AMMECR1 Acife_2211 9d27acd6fb604032f6f87402ba2b4919 202 Gene3D G3DSA:3.30.1490.150 118 190 1.6E-49 T 12-10-2018 Acife_2211 9d27acd6fb604032f6f87402ba2b4919 202 Gene3D G3DSA:3.30.700.20 18 192 1.6E-49 T 12-10-2018 IPR027485 AMMECR1, N-terminal Acife_2211 9d27acd6fb604032f6f87402ba2b4919 202 SUPERFAMILY SSF143447 14 193 6.15E-53 T 12-10-2018 IPR036071 AMMECR1 domain superfamily Acife_2211 9d27acd6fb604032f6f87402ba2b4919 202 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 20 190 1.3E-55 T 12-10-2018 IPR027623 AmmeMemoRadiSam system protein A Acife_2211 9d27acd6fb604032f6f87402ba2b4919 202 Pfam PF01871 AMMECR1 23 189 4.1E-42 T 12-10-2018 IPR002733 AMMECR1 domain Acife_2163 e61023ac80238cec72e967ead49c461c 179 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 28.462 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Acife_2163 e61023ac80238cec72e967ead49c461c 179 ProSitePatterns PS01128 Shikimate kinase signature. 58 84 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Acife_2163 e61023ac80238cec72e967ead49c461c 179 Gene3D G3DSA:3.40.50.300 2 174 2.5E-53 T 12-10-2018 Acife_2163 e61023ac80238cec72e967ead49c461c 179 SUPERFAMILY SSF52540 5 168 2.49E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2163 e61023ac80238cec72e967ead49c461c 179 PRINTS PR01100 Shikimate kinase family signature 76 85 1.1E-24 T 12-10-2018 Acife_2163 e61023ac80238cec72e967ead49c461c 179 PRINTS PR01100 Shikimate kinase family signature 29 42 1.1E-24 T 12-10-2018 Acife_2163 e61023ac80238cec72e967ead49c461c 179 PRINTS PR01100 Shikimate kinase family signature 57 65 1.1E-24 T 12-10-2018 Acife_2163 e61023ac80238cec72e967ead49c461c 179 PRINTS PR01100 Shikimate kinase family signature 5 20 1.1E-24 T 12-10-2018 Acife_2163 e61023ac80238cec72e967ead49c461c 179 PRINTS PR01100 Shikimate kinase family signature 97 114 1.1E-24 T 12-10-2018 Acife_2163 e61023ac80238cec72e967ead49c461c 179 Pfam PF01202 Shikimate kinase 11 168 5.0E-48 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Acife_2013 1e818995ef1bb5ac53e7fbb245a3d2e8 497 SUPERFAMILY SSF103473 19 490 7.06E-64 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_2013 1e818995ef1bb5ac53e7fbb245a3d2e8 497 ProSitePatterns PS00217 Sugar transport proteins signature 2. 136 161 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Acife_2013 1e818995ef1bb5ac53e7fbb245a3d2e8 497 Gene3D G3DSA:1.20.1250.20 31 491 2.0E-76 T 12-10-2018 Acife_2013 1e818995ef1bb5ac53e7fbb245a3d2e8 497 Pfam PF00083 Sugar (and other) transporter 75 490 9.6E-45 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Acife_3175 932e4ac7ce5ca9e353185018e41d27bb 523 Gene3D G3DSA:1.10.3720.10 6 215 3.0E-43 T 12-10-2018 IPR035906 MetI-like superfamily Acife_3175 932e4ac7ce5ca9e353185018e41d27bb 523 Pfam PF00005 ABC transporter 290 447 1.1E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_3175 932e4ac7ce5ca9e353185018e41d27bb 523 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 6.0E-22 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Acife_3175 932e4ac7ce5ca9e353185018e41d27bb 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 209 4.2E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Acife_3175 932e4ac7ce5ca9e353185018e41d27bb 523 ProSitePatterns PS00211 ABC transporters family signature. 419 433 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_3175 932e4ac7ce5ca9e353185018e41d27bb 523 SUPERFAMILY SSF52540 274 517 3.19E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3175 932e4ac7ce5ca9e353185018e41d27bb 523 SMART SM00382 298 496 1.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_3175 932e4ac7ce5ca9e353185018e41d27bb 523 SUPERFAMILY SSF161098 12 198 4.06E-37 T 12-10-2018 IPR035906 MetI-like superfamily Acife_3175 932e4ac7ce5ca9e353185018e41d27bb 523 Gene3D G3DSA:3.40.50.300 271 522 1.5E-63 T 12-10-2018 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 Gene3D G3DSA:1.10.10.60 380 466 2.1E-21 T 12-10-2018 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 SUPERFAMILY SSF52540 135 379 3.58E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 Gene3D G3DSA:3.40.50.300 124 307 3.8E-64 T 12-10-2018 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 Gene3D G3DSA:3.40.50.2300 1 121 2.8E-37 T 12-10-2018 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 Pfam PF00158 Sigma-54 interaction domain 136 303 3.4E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 SUPERFAMILY SSF46689 376 466 1.3E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 9.3E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 9.3E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 Gene3D G3DSA:1.10.8.60 308 379 2.9E-21 T 12-10-2018 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 Pfam PF00072 Response regulator receiver domain 4 113 3.6E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 SMART SM00448 2 113 7.1E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 Pfam PF02954 Bacterial regulatory protein, Fis family 424 463 4.4E-15 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 463 1.0E-235 T 12-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 SUPERFAMILY SSF52172 3 181 5.55E-42 T 12-10-2018 IPR011006 CheY-like superfamily Acife_0257 f5282aa7b8f11f34612bebbb7f3d8573 480 SMART SM00382 156 299 3.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1292 cc11ef475e3631223f3caf43d51f1682 237 Gene3D G3DSA:1.20.58.220 1 117 3.1E-41 T 12-10-2018 IPR038078 PhoU-like domain superfamily Acife_1292 cc11ef475e3631223f3caf43d51f1682 237 Gene3D G3DSA:1.20.58.220 119 235 1.3E-33 T 12-10-2018 IPR038078 PhoU-like domain superfamily Acife_1292 cc11ef475e3631223f3caf43d51f1682 237 PIRSF PIRSF003107 5 226 1.1E-67 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Acife_1292 cc11ef475e3631223f3caf43d51f1682 237 SUPERFAMILY SSF109755 10 233 2.2E-68 T 12-10-2018 Acife_1292 cc11ef475e3631223f3caf43d51f1682 237 Pfam PF01895 PhoU domain 24 108 6.5E-22 T 12-10-2018 IPR026022 PhoU domain Acife_1292 cc11ef475e3631223f3caf43d51f1682 237 Pfam PF01895 PhoU domain 130 213 1.4E-16 T 12-10-2018 IPR026022 PhoU domain Acife_1292 cc11ef475e3631223f3caf43d51f1682 237 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 9 222 6.5E-75 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Acife_1755 10ebe21f0a9445ffc6a209032a53a4e5 129 SUPERFAMILY SSF56214 1 126 6.54E-26 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Acife_1755 10ebe21f0a9445ffc6a209032a53a4e5 129 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 127 23.751 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Acife_1755 10ebe21f0a9445ffc6a209032a53a4e5 129 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 127 1.9E-22 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Acife_1755 10ebe21f0a9445ffc6a209032a53a4e5 129 Gene3D G3DSA:3.90.470.20 1 128 3.2E-33 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Acife_1755 10ebe21f0a9445ffc6a209032a53a4e5 129 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 126 1.0E-5 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Acife_1755 10ebe21f0a9445ffc6a209032a53a4e5 129 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 127 2.0E-26 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Acife_1755 10ebe21f0a9445ffc6a209032a53a4e5 129 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 98 5.9E-17 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Acife_2480 cff17511521d59231572a9b84e482c2d 342 SUPERFAMILY SSF102114 16 319 1.44E-67 T 12-10-2018 Acife_2480 cff17511521d59231572a9b84e482c2d 342 Pfam PF04055 Radical SAM superfamily 28 188 8.1E-28 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_2480 cff17511521d59231572a9b84e482c2d 342 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 30 41 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2480 cff17511521d59231572a9b84e482c2d 342 Pfam PF13353 4Fe-4S single cluster domain 31 133 6.2E-9 T 12-10-2018 Acife_2480 cff17511521d59231572a9b84e482c2d 342 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 15 342 2.7E-112 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2480 cff17511521d59231572a9b84e482c2d 342 Gene3D G3DSA:3.20.20.70 12 342 3.4E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2480 cff17511521d59231572a9b84e482c2d 342 Pfam PF06463 Molybdenum Cofactor Synthesis C 194 325 1.2E-32 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2480 cff17511521d59231572a9b84e482c2d 342 SMART SM00729 24 228 7.9E-7 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Acife_2480 cff17511521d59231572a9b84e482c2d 342 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 15 342 36.386 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_1059 002fcced3d294985189715fa69725ce3 227 SUPERFAMILY SSF52172 2 121 5.69E-38 T 12-10-2018 IPR011006 CheY-like superfamily Acife_1059 002fcced3d294985189715fa69725ce3 227 Gene3D G3DSA:3.40.50.2300 1 122 5.8E-36 T 12-10-2018 Acife_1059 002fcced3d294985189715fa69725ce3 227 Gene3D G3DSA:1.10.10.10 123 226 1.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1059 002fcced3d294985189715fa69725ce3 227 SMART SM00862 147 223 7.0E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_1059 002fcced3d294985189715fa69725ce3 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 4.9E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_1059 002fcced3d294985189715fa69725ce3 227 SUPERFAMILY SSF46894 124 224 2.52E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Acife_1059 002fcced3d294985189715fa69725ce3 227 SMART SM00448 2 113 2.3E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1059 002fcced3d294985189715fa69725ce3 227 Pfam PF00072 Response regulator receiver domain 4 113 1.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_0236 373038f836fca95d46035aade0e69224 124 Pfam PF13488 Glycine zipper 36 76 1.6E-8 T 12-10-2018 IPR039567 Glycine zipper domain Acife_3210 b49e2a94ffc9987668f6c69049549558 410 Pfam PF12838 4Fe-4S dicluster domain 24 89 7.7E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_3210 b49e2a94ffc9987668f6c69049549558 410 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_3210 b49e2a94ffc9987668f6c69049549558 410 PIRSF PIRSF000139 5 410 4.2E-113 T 12-10-2018 Acife_3210 b49e2a94ffc9987668f6c69049549558 410 Gene3D G3DSA:1.10.1060.10 3 106 1.5E-7 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Acife_3210 b49e2a94ffc9987668f6c69049549558 410 Pfam PF02754 Cysteine-rich domain 177 258 6.1E-11 T 12-10-2018 IPR004017 Cysteine-rich domain Acife_3210 b49e2a94ffc9987668f6c69049549558 410 Pfam PF02754 Cysteine-rich domain 306 390 5.9E-13 T 12-10-2018 IPR004017 Cysteine-rich domain Acife_3210 b49e2a94ffc9987668f6c69049549558 410 SUPERFAMILY SSF54862 19 116 8.79E-19 T 12-10-2018 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 Gene3D G3DSA:3.40.50.720 8 433 1.0E-173 T 12-10-2018 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 SUPERFAMILY SSF55347 176 485 2.06E-111 T 12-10-2018 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 5 485 78.088 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 5 485 1.4E-176 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 9 186 4.3E-58 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 Gene3D G3DSA:3.30.360.10 176 474 1.0E-173 T 12-10-2018 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 SUPERFAMILY SSF51735 5 189 2.17E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 2.1E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 2.1E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 2.1E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 2.1E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 2.1E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 PIRSF PIRSF000110 1 487 4.7E-182 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_1368 0ed68a81eeaaeaca70db2f28898e715e 487 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 484 4.8E-113 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_1398 f554a128ed093b3570908da59acfa5b0 238 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 3 225 6.5E-50 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_1398 f554a128ed093b3570908da59acfa5b0 238 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_1398 f554a128ed093b3570908da59acfa5b0 238 SUPERFAMILY SSF51366 2 229 2.09E-72 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Acife_1398 f554a128ed093b3570908da59acfa5b0 238 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 226 9.7E-57 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_1398 f554a128ed093b3570908da59acfa5b0 238 SMART SM00934 4 226 3.8E-93 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_1398 f554a128ed093b3570908da59acfa5b0 238 Gene3D G3DSA:3.20.20.70 2 231 2.3E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1398 f554a128ed093b3570908da59acfa5b0 238 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 231 38.28 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_2672 56c8c38fc94069c95ca45f27fc46954a 270 Gene3D G3DSA:3.40.50.1580 2 268 5.9E-86 T 12-10-2018 Acife_2672 56c8c38fc94069c95ca45f27fc46954a 270 SUPERFAMILY SSF53167 4 256 1.35E-82 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Acife_2672 56c8c38fc94069c95ca45f27fc46954a 270 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 263 37.919 T 12-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Acife_2672 56c8c38fc94069c95ca45f27fc46954a 270 Pfam PF01048 Phosphorylase superfamily 4 243 4.5E-46 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Acife_2672 56c8c38fc94069c95ca45f27fc46954a 270 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 4 243 3.1E-90 T 12-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Acife_1348 f950e593d48b0f6cbc28f488a2c208b1 222 Gene3D G3DSA:3.10.450.50 59 185 1.1E-27 T 12-10-2018 Acife_1348 f950e593d48b0f6cbc28f488a2c208b1 222 TIGRFAM TIGR03481 HpnM: hopanoid biosynthesis associated membrane protein HpnM 37 218 2.9E-56 T 12-10-2018 IPR017842 Hopanoid biosynthesis-associated membrane protein HpnM Acife_1348 f950e593d48b0f6cbc28f488a2c208b1 222 Gene3D G3DSA:1.10.10.640 87 210 1.1E-27 T 12-10-2018 Acife_1348 f950e593d48b0f6cbc28f488a2c208b1 222 Pfam PF05494 MlaC protein 57 211 8.2E-33 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Acife_0180 16949681536e08edad34691e128e5f80 86 SUPERFAMILY SSF89447 1 40 2.62E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_0180 16949681536e08edad34691e128e5f80 86 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 4 38 4.8E-6 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_0180 16949681536e08edad34691e128e5f80 86 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 38 2.2E-11 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_0180 16949681536e08edad34691e128e5f80 86 Gene3D G3DSA:2.10.260.10 1 40 4.2E-11 T 12-10-2018 Acife_0180 16949681536e08edad34691e128e5f80 86 SMART SM00966 4 49 1.1E-6 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_2870 8e5686fdb417e23456b7effd4fe189b4 253 SUPERFAMILY SSF56219 1 253 4.45E-77 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Acife_2870 8e5686fdb417e23456b7effd4fe189b4 253 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 252 6.8E-79 T 12-10-2018 Acife_2870 8e5686fdb417e23456b7effd4fe189b4 253 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Acife_2870 8e5686fdb417e23456b7effd4fe189b4 253 Gene3D G3DSA:3.60.10.10 1 253 3.1E-86 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Acife_2870 8e5686fdb417e23456b7effd4fe189b4 253 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 188 203 - T 12-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 Acife_2870 8e5686fdb417e23456b7effd4fe189b4 253 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 3.1E-85 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Acife_2870 8e5686fdb417e23456b7effd4fe189b4 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 245 7.7E-20 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Acife_2752 e646ceb42da15d7d05b09a7e2dc2f0cd 389 SMART SM00155 292 319 0.001 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Acife_2752 e646ceb42da15d7d05b09a7e2dc2f0cd 389 SMART SM00155 118 145 15.0 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Acife_2752 e646ceb42da15d7d05b09a7e2dc2f0cd 389 SUPERFAMILY SSF56024 32 177 5.65E-24 T 12-10-2018 Acife_2752 e646ceb42da15d7d05b09a7e2dc2f0cd 389 SUPERFAMILY SSF56024 215 366 9.64E-36 T 12-10-2018 Acife_2752 e646ceb42da15d7d05b09a7e2dc2f0cd 389 Pfam PF13091 PLD-like domain 221 337 5.8E-26 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Acife_2752 e646ceb42da15d7d05b09a7e2dc2f0cd 389 Gene3D G3DSA:3.30.870.10 204 384 5.6E-25 T 12-10-2018 Acife_2752 e646ceb42da15d7d05b09a7e2dc2f0cd 389 Gene3D G3DSA:3.30.870.10 17 177 1.1E-17 T 12-10-2018 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 Pfam PF00311 Phosphoenolpyruvate carboxylase 141 929 5.0E-273 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 577 589 - T 12-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 142 153 - T 12-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 194 210 7.4E-61 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 410 430 7.4E-61 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 617 646 7.4E-61 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 253 268 7.4E-61 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 595 7.4E-61 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 141 154 7.4E-61 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 753 779 7.4E-61 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 Gene3D G3DSA:1.20.1440.90 310 413 1.9E-8 T 12-10-2018 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 3 929 17.231 T 12-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Acife_1420 275472c2a9cfa5ce0cbac1e6afc2d6a6 929 SUPERFAMILY SSF51621 13 929 2.04E-282 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Acife_3255 bd6967e07ad2e2f0a039f61d4e858032 233 SUPERFAMILY SSF74653 124 233 1.24E-12 T 12-10-2018 Acife_3255 bd6967e07ad2e2f0a039f61d4e858032 233 Pfam PF13103 TonB C terminal 168 224 1.5E-7 T 12-10-2018 Acife_3255 bd6967e07ad2e2f0a039f61d4e858032 233 Gene3D G3DSA:3.30.1150.10 121 221 4.1E-9 T 12-10-2018 Acife_0367 f846d74af27a6fde8dc9d7d2535adb4b 925 SMART SM00490 487 571 2.8E-18 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_0367 f846d74af27a6fde8dc9d7d2535adb4b 925 Pfam PF00271 Helicase conserved C-terminal domain 463 571 2.9E-17 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_0367 f846d74af27a6fde8dc9d7d2535adb4b 925 SUPERFAMILY SSF52540 153 587 4.7E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0367 f846d74af27a6fde8dc9d7d2535adb4b 925 Gene3D G3DSA:3.40.50.300 419 598 1.3E-29 T 12-10-2018 Acife_0367 f846d74af27a6fde8dc9d7d2535adb4b 925 Pfam PF00176 SNF2 family N-terminal domain 123 289 5.3E-14 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Acife_0367 f846d74af27a6fde8dc9d7d2535adb4b 925 Gene3D G3DSA:3.40.50.10810 100 328 3.5E-58 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Acife_0367 f846d74af27a6fde8dc9d7d2535adb4b 925 SMART SM00487 99 303 1.1E-19 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_1708 3789cf8e6d09a603e38bc917811339ba 661 SUPERFAMILY SSF51735 404 544 1.18E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1708 3789cf8e6d09a603e38bc917811339ba 661 Gene3D G3DSA:3.30.70.1450 577 651 1.3E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Acife_1708 3789cf8e6d09a603e38bc917811339ba 661 Gene3D G3DSA:3.40.50.720 404 564 6.9E-38 T 12-10-2018 Acife_1708 3789cf8e6d09a603e38bc917811339ba 661 Gene3D G3DSA:1.20.1530.20 2 383 4.3E-83 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Acife_1708 3789cf8e6d09a603e38bc917811339ba 661 Pfam PF02080 TrkA-C domain 582 645 1.0E-10 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Acife_1708 3789cf8e6d09a603e38bc917811339ba 661 Pfam PF02254 TrkA-N domain 408 521 6.0E-26 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Acife_1708 3789cf8e6d09a603e38bc917811339ba 661 SUPERFAMILY SSF116726 575 646 2.22E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Acife_1708 3789cf8e6d09a603e38bc917811339ba 661 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 1.1E-59 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Acife_0847 dcd2d1e60841187f4add36052c6ebced 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 69 1.9E-18 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Acife_0847 dcd2d1e60841187f4add36052c6ebced 80 SUPERFAMILY SSF143120 1 78 5.1E-20 T 12-10-2018 IPR036165 YefM-like superfamily Acife_0847 dcd2d1e60841187f4add36052c6ebced 80 Gene3D G3DSA:3.40.1620.40 3 66 6.5E-24 T 12-10-2018 Acife_0847 dcd2d1e60841187f4add36052c6ebced 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 54 1.6E-10 T 12-10-2018 Acife_1135 b865e70fea91931bb747c80b193c13d5 103 Pfam PF01722 BolA-like protein 10 84 9.0E-24 T 12-10-2018 IPR002634 BolA protein Acife_1135 b865e70fea91931bb747c80b193c13d5 103 PIRSF PIRSF003113 1 98 7.3E-23 T 12-10-2018 IPR002634 BolA protein Acife_1135 b865e70fea91931bb747c80b193c13d5 103 SUPERFAMILY SSF82657 3 89 1.83E-22 T 12-10-2018 IPR036065 BolA-like superfamily Acife_1135 b865e70fea91931bb747c80b193c13d5 103 Gene3D G3DSA:3.30.300.90 1 91 3.5E-26 T 12-10-2018 Acife_0016 dd0aad49c3548c3ea37b3ff5649ff27f 313 Pfam PF00551 Formyl transferase 8 183 3.4E-40 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Acife_0016 dd0aad49c3548c3ea37b3ff5649ff27f 313 Gene3D G3DSA:3.10.25.10 210 313 1.3E-29 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Acife_0016 dd0aad49c3548c3ea37b3ff5649ff27f 313 SUPERFAMILY SSF53328 7 210 2.22E-62 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Acife_0016 dd0aad49c3548c3ea37b3ff5649ff27f 313 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 35.116 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Acife_0016 dd0aad49c3548c3ea37b3ff5649ff27f 313 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 6 311 1.9E-91 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Acife_0016 dd0aad49c3548c3ea37b3ff5649ff27f 313 Pfam PF02911 Formyl transferase, C-terminal domain 207 305 9.4E-26 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Acife_0016 dd0aad49c3548c3ea37b3ff5649ff27f 313 SUPERFAMILY SSF50486 208 312 1.37E-31 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Acife_0016 dd0aad49c3548c3ea37b3ff5649ff27f 313 Gene3D G3DSA:3.40.50.170 1 209 7.0E-74 T 12-10-2018 Acife_1969 65027debb7f74c1e0a7a6bc35f37d425 419 Pfam PF00482 Type II secretion system (T2SS), protein F 285 407 9.9E-24 T 12-10-2018 IPR018076 Type II secretion system F domain Acife_1969 65027debb7f74c1e0a7a6bc35f37d425 419 Pfam PF00482 Type II secretion system (T2SS), protein F 82 204 1.3E-31 T 12-10-2018 IPR018076 Type II secretion system F domain Acife_1969 65027debb7f74c1e0a7a6bc35f37d425 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 396 415 3.4E-17 T 12-10-2018 IPR003004 GspF/PilC family Acife_1969 65027debb7f74c1e0a7a6bc35f37d425 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 77 89 3.4E-17 T 12-10-2018 IPR003004 GspF/PilC family Acife_1969 65027debb7f74c1e0a7a6bc35f37d425 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 380 394 3.4E-17 T 12-10-2018 IPR003004 GspF/PilC family Acife_1969 65027debb7f74c1e0a7a6bc35f37d425 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 176 204 3.4E-17 T 12-10-2018 IPR003004 GspF/PilC family Acife_1969 65027debb7f74c1e0a7a6bc35f37d425 419 Gene3D G3DSA:1.20.81.30 68 183 1.8E-29 T 12-10-2018 Acife_1969 65027debb7f74c1e0a7a6bc35f37d425 419 Gene3D G3DSA:1.20.81.30 268 378 9.4E-24 T 12-10-2018 Acife_1366 a2cf6c28cff464f3cf710d01557c1c5c 325 Pfam PF01207 Dihydrouridine synthase (Dus) 16 318 5.1E-66 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Acife_1366 a2cf6c28cff464f3cf710d01557c1c5c 325 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Acife_1366 a2cf6c28cff464f3cf710d01557c1c5c 325 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 8 325 41.424 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Acife_1366 a2cf6c28cff464f3cf710d01557c1c5c 325 SUPERFAMILY SSF51395 14 318 5.5E-62 T 12-10-2018 Acife_1366 a2cf6c28cff464f3cf710d01557c1c5c 325 Gene3D G3DSA:3.20.20.70 10 251 3.6E-67 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_0145 b09266e28a89c2bd62b68233d559719c 203 Pfam PF01553 Acyltransferase 41 153 1.7E-16 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Acife_0145 b09266e28a89c2bd62b68233d559719c 203 SUPERFAMILY SSF69593 25 201 9.81E-25 T 12-10-2018 Acife_0145 b09266e28a89c2bd62b68233d559719c 203 SMART SM00563 48 156 1.2E-20 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Acife_1421 2333119d67a747cbe6cd70ce97763346 88 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 6 67 27.167 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Acife_1421 2333119d67a747cbe6cd70ce97763346 88 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 9 67 7.9E-29 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Acife_1421 2333119d67a747cbe6cd70ce97763346 88 Gene3D G3DSA:2.30.30.100 4 77 1.1E-29 T 12-10-2018 Acife_1421 2333119d67a747cbe6cd70ce97763346 88 Pfam PF17209 Hfq protein 10 71 1.1E-29 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Acife_1421 2333119d67a747cbe6cd70ce97763346 88 SUPERFAMILY SSF50182 10 71 7.36E-23 T 12-10-2018 IPR010920 LSM domain superfamily Acife_0084 301a3371e85906b3109df82bae15ae93 395 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 149 393 6.4E-78 T 12-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 Acife_0084 301a3371e85906b3109df82bae15ae93 395 Pfam PF01578 Cytochrome C assembly protein 180 390 1.4E-48 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Acife_1849 301a3371e85906b3109df82bae15ae93 395 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 149 393 6.4E-78 T 12-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 Acife_1849 301a3371e85906b3109df82bae15ae93 395 Pfam PF01578 Cytochrome C assembly protein 180 390 1.4E-48 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 Gene3D G3DSA:3.50.50.60 109 442 2.8E-101 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 306 1.0E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.7E-23 T 12-10-2018 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 278 285 3.7E-23 T 12-10-2018 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 3.7E-23 T 12-10-2018 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.7E-23 T 12-10-2018 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 392 407 3.7E-23 T 12-10-2018 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 3.8E-24 T 12-10-2018 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 3.8E-24 T 12-10-2018 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 3.8E-24 T 12-10-2018 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.8E-24 T 12-10-2018 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 3.8E-24 T 12-10-2018 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 435 4.7E-13 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 SUPERFAMILY SSF55424 330 446 1.03E-20 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 SUPERFAMILY SSF51905 1 322 5.37E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_0796 2feff3bf54b6c842ccd097d4d6ad7c42 465 Gene3D G3DSA:3.50.50.60 8 343 2.8E-101 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2639 73abce86434f0eab01df9eeebf1e6fa8 105 Gene3D G3DSA:2.60.120.10 1 105 1.5E-40 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_2639 73abce86434f0eab01df9eeebf1e6fa8 105 Pfam PF06865 Protein of unknown function (DUF1255) 17 102 1.4E-17 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 Acife_2639 73abce86434f0eab01df9eeebf1e6fa8 105 SUPERFAMILY SSF51182 20 102 1.25E-15 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Acife_1506 13ea0d1934f1aa5599136046bff84e41 449 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 16 444 4.9E-144 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Acife_1506 13ea0d1934f1aa5599136046bff84e41 449 Gene3D G3DSA:3.90.1150.10 11 444 1.2E-142 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1506 13ea0d1934f1aa5599136046bff84e41 449 PIRSF PIRSF000521 32 319 1.8E-20 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Acife_1506 13ea0d1934f1aa5599136046bff84e41 449 PIRSF PIRSF000521 395 446 260.0 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Acife_1506 13ea0d1934f1aa5599136046bff84e41 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Acife_1506 13ea0d1934f1aa5599136046bff84e41 449 SUPERFAMILY SSF53383 10 444 7.67E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_1506 13ea0d1934f1aa5599136046bff84e41 449 Pfam PF00202 Aminotransferase class-III 31 443 6.7E-102 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Acife_1506 13ea0d1934f1aa5599136046bff84e41 449 Gene3D G3DSA:3.40.640.10 65 343 1.2E-142 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1837 b24f91cfdc871e463fac15f11ba67f61 232 Gene3D G3DSA:2.40.50.580 3 78 6.3E-27 T 12-10-2018 Acife_1837 b24f91cfdc871e463fac15f11ba67f61 232 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 2 224 6.4E-65 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein Acife_1837 b24f91cfdc871e463fac15f11ba67f61 232 Gene3D G3DSA:3.40.1350.60 79 230 2.5E-50 T 12-10-2018 Acife_1837 b24f91cfdc871e463fac15f11ba67f61 232 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 232 53.298 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein Acife_1837 b24f91cfdc871e463fac15f11ba67f61 232 Pfam PF03749 Sugar fermentation stimulation protein 12 223 4.3E-74 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Gene3D G3DSA:3.40.50.300 541 780 7.7E-225 T 12-10-2018 Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 SMART SM00490 825 909 5.8E-14 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 SUPERFAMILY SSF52540 523 782 1.63E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Gene3D G3DSA:3.40.50.300 477 988 7.7E-225 T 12-10-2018 Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Gene3D G3DSA:2.30.30.840 481 540 7.7E-225 T 12-10-2018 Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Pfam PF03461 TRCF domain 1009 1102 6.6E-26 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 SMART SM00487 599 789 1.7E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 SUPERFAMILY SSF52540 781 989 2.4E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 SUPERFAMILY SSF141259 472 547 8.11E-15 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Gene3D G3DSA:3.40.50.11140 351 450 7.9E-11 T 12-10-2018 Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 SMART SM01058 477 575 7.6E-36 T 12-10-2018 IPR003711 CarD-like/TRCF domain Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 SUPERFAMILY SSF52540 18 336 3.98E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1108 26.958 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Gene3D G3DSA:3.90.1150.50 1005 1111 6.5E-30 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Gene3D G3DSA:3.40.50.11180 24 329 5.5E-98 T 12-10-2018 Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 SUPERFAMILY SSF143517 998 1106 3.01E-32 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Pfam PF00271 Helicase conserved C-terminal domain 807 908 1.3E-13 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 SMART SM00982 1008 1108 4.6E-40 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 146 1081 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Pfam PF02559 CarD-like/TRCF domain 478 574 2.3E-23 T 12-10-2018 IPR003711 CarD-like/TRCF domain Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 SUPERFAMILY SSF52540 351 460 1.01E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Pfam PF00270 DEAD/DEAH box helicase 604 761 8.7E-19 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Acife_2666 c3cfdc260f805f17e896072d0a20e31e 1121 Gene3D G3DSA:3.30.2060.10 129 214 5.5E-98 T 12-10-2018 Acife_0696 830664ac00ee5bb405e5dfa3846ea7d8 131 SUPERFAMILY SSF103247 5 129 1.02E-35 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_0696 830664ac00ee5bb405e5dfa3846ea7d8 131 Gene3D G3DSA:3.30.310.70 6 129 3.8E-45 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_0696 830664ac00ee5bb405e5dfa3846ea7d8 131 Pfam PF03625 Domain of unknown function DUF302 36 99 1.1E-27 T 12-10-2018 IPR005180 Domain of unknown function DUF302 Acife_0696 830664ac00ee5bb405e5dfa3846ea7d8 131 PIRSF PIRSF021774 1 131 5.2E-43 T 12-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 Acife_1399 ee811f75323dbd5cbd30bcbccb3cb73d 195 Pfam PF00156 Phosphoribosyl transferase domain 43 152 2.0E-9 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Acife_1399 ee811f75323dbd5cbd30bcbccb3cb73d 195 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 6 192 2.3E-61 T 12-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1399 ee811f75323dbd5cbd30bcbccb3cb73d 195 SUPERFAMILY SSF53271 3 191 2.27E-30 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Acife_1399 ee811f75323dbd5cbd30bcbccb3cb73d 195 Gene3D G3DSA:3.40.50.2020 5 194 1.1E-51 T 12-10-2018 Acife_1399 ee811f75323dbd5cbd30bcbccb3cb73d 195 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 195 23.961 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Acife_1759 af438e51d897e805be58a2ac0155ffa4 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 217 28.347 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Acife_1759 af438e51d897e805be58a2ac0155ffa4 226 SMART SM00358 154 221 1.2E-18 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain Acife_1759 af438e51d897e805be58a2ac0155ffa4 226 Gene3D G3DSA:3.30.160.20 152 225 5.9E-18 T 12-10-2018 Acife_1759 af438e51d897e805be58a2ac0155ffa4 226 Gene3D G3DSA:1.10.1520.10 3 145 7.0E-44 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Acife_1759 af438e51d897e805be58a2ac0155ffa4 226 Pfam PF00035 Double-stranded RNA binding motif 154 220 8.0E-14 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain Acife_1759 af438e51d897e805be58a2ac0155ffa4 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 219 1.9E-69 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Acife_1759 af438e51d897e805be58a2ac0155ffa4 226 SMART SM00535 19 147 2.2E-48 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Acife_1759 af438e51d897e805be58a2ac0155ffa4 226 Pfam PF14622 Ribonuclease-III-like 18 137 8.2E-33 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Acife_1759 af438e51d897e805be58a2ac0155ffa4 226 SUPERFAMILY SSF69065 4 157 1.22E-46 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Acife_1759 af438e51d897e805be58a2ac0155ffa4 226 SUPERFAMILY SSF54768 107 222 5.13E-24 T 12-10-2018 Acife_1759 af438e51d897e805be58a2ac0155ffa4 226 ProSitePatterns PS00517 Ribonuclease III family signature. 36 44 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Acife_1065 b5e1c905054f25098c5f5f59fb7d8d7c 243 Gene3D G3DSA:3.30.1150.10 120 240 5.2E-17 T 12-10-2018 Acife_1065 b5e1c905054f25098c5f5f59fb7d8d7c 243 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 167 229 3.7E-9 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 Acife_1065 b5e1c905054f25098c5f5f59fb7d8d7c 243 SUPERFAMILY SSF74653 148 226 3.66E-12 T 12-10-2018 Acife_1065 b5e1c905054f25098c5f5f59fb7d8d7c 243 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 165 229 3.3E-11 T 12-10-2018 IPR006260 TonB/TolA, C-terminal Acife_1065 b5e1c905054f25098c5f5f59fb7d8d7c 243 PRINTS PR01217 Proline rich extensin signature 41 53 2.9E-11 T 12-10-2018 Acife_1065 b5e1c905054f25098c5f5f59fb7d8d7c 243 PRINTS PR01217 Proline rich extensin signature 123 140 2.9E-11 T 12-10-2018 Acife_1065 b5e1c905054f25098c5f5f59fb7d8d7c 243 PRINTS PR01217 Proline rich extensin signature 93 109 2.9E-11 T 12-10-2018 Acife_1065 b5e1c905054f25098c5f5f59fb7d8d7c 243 PRINTS PR01217 Proline rich extensin signature 65 86 2.9E-11 T 12-10-2018 Acife_1036 8df32c19f564d85090a4ee79760e9e58 430 Gene3D G3DSA:3.30.160.390 5 107 2.9E-24 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Acife_1036 8df32c19f564d85090a4ee79760e9e58 430 Pfam PF13356 Arm DNA-binding domain 9 90 1.4E-15 T 12-10-2018 IPR025166 Integrase, DNA-binding domain Acife_1036 8df32c19f564d85090a4ee79760e9e58 430 Pfam PF00589 Phage integrase family 238 397 3.3E-17 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_1036 8df32c19f564d85090a4ee79760e9e58 430 SUPERFAMILY SSF56349 111 404 1.62E-44 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_1036 8df32c19f564d85090a4ee79760e9e58 430 Gene3D G3DSA:1.10.443.10 216 408 1.5E-19 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_1036 8df32c19f564d85090a4ee79760e9e58 430 Gene3D G3DSA:1.10.150.130 108 215 5.7E-23 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_3243 3d8856ed1e5abb1d3a65f92cc52b5429 145 SUPERFAMILY SSF88723 4 134 2.64E-14 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_3243 3d8856ed1e5abb1d3a65f92cc52b5429 145 Gene3D G3DSA:3.40.50.1010 2 129 2.2E-15 T 12-10-2018 Acife_3243 3d8856ed1e5abb1d3a65f92cc52b5429 145 Pfam PF01850 PIN domain 4 125 3.9E-10 T 12-10-2018 IPR002716 PIN domain Acife_0590 e8b66f7ce5799f69baeacf458d2b64d6 339 Gene3D G3DSA:3.30.390.60 127 227 1.6E-38 T 12-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Acife_0590 e8b66f7ce5799f69baeacf458d2b64d6 339 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 335 1.5E-93 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Acife_0590 e8b66f7ce5799f69baeacf458d2b64d6 339 Gene3D G3DSA:1.10.10.10 1 82 4.7E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0590 e8b66f7ce5799f69baeacf458d2b64d6 339 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 329 26.228 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Acife_0590 e8b66f7ce5799f69baeacf458d2b64d6 339 Gene3D G3DSA:3.30.450.40 103 332 1.6E-38 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_0590 e8b66f7ce5799f69baeacf458d2b64d6 339 SUPERFAMILY SSF46785 1 82 1.64E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0590 e8b66f7ce5799f69baeacf458d2b64d6 339 PIRSF PIRSF005485 1 339 2.3E-100 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Acife_0590 e8b66f7ce5799f69baeacf458d2b64d6 339 Pfam PF01628 HrcA protein C terminal domain 103 322 4.5E-53 T 12-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Acife_0590 e8b66f7ce5799f69baeacf458d2b64d6 339 SUPERFAMILY SSF55781 70 338 5.69E-59 T 12-10-2018 Acife_0256 a9686657b905a4cc33653be6d06abc47 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 241 353 9.8E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0256 a9686657b905a4cc33653be6d06abc47 361 Gene3D G3DSA:1.10.287.130 139 196 1.0E-12 T 12-10-2018 Acife_0256 a9686657b905a4cc33653be6d06abc47 361 SUPERFAMILY SSF47384 135 192 1.04E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_0256 a9686657b905a4cc33653be6d06abc47 361 SUPERFAMILY SSF55785 15 107 3.14E-7 T 12-10-2018 IPR035965 PAS domain superfamily Acife_0256 a9686657b905a4cc33653be6d06abc47 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 192 3.7E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_0256 a9686657b905a4cc33653be6d06abc47 361 SMART SM00387 240 355 2.3E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0256 a9686657b905a4cc33653be6d06abc47 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 301 1.4E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0256 a9686657b905a4cc33653be6d06abc47 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 352 1.4E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0256 a9686657b905a4cc33653be6d06abc47 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 1.4E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0256 a9686657b905a4cc33653be6d06abc47 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 315 1.4E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0256 a9686657b905a4cc33653be6d06abc47 361 Gene3D G3DSA:3.30.450.20 12 119 3.0E-9 T 12-10-2018 Acife_0256 a9686657b905a4cc33653be6d06abc47 361 SUPERFAMILY SSF55874 204 352 3.93E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0256 a9686657b905a4cc33653be6d06abc47 361 Gene3D G3DSA:3.30.565.10 200 353 3.1E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0256 a9686657b905a4cc33653be6d06abc47 361 SMART SM00388 136 200 8.9E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2196 f88b15d77e1f9620c8de300706b51ff5 294 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 291 4.7E-125 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_2196 f88b15d77e1f9620c8de300706b51ff5 294 Gene3D G3DSA:3.90.226.10 33 293 2.2E-86 T 12-10-2018 Acife_2196 f88b15d77e1f9620c8de300706b51ff5 294 SUPERFAMILY SSF52096 33 289 1.39E-87 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Acife_2196 f88b15d77e1f9620c8de300706b51ff5 294 Pfam PF01039 Carboxyl transferase domain 106 248 8.3E-18 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Acife_2196 f88b15d77e1f9620c8de300706b51ff5 294 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 289 38.733 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_2196 f88b15d77e1f9620c8de300706b51ff5 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 171 189 4.6E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_2196 f88b15d77e1f9620c8de300706b51ff5 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 259 268 4.6E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_2196 f88b15d77e1f9620c8de300706b51ff5 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 208 225 4.6E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_2196 f88b15d77e1f9620c8de300706b51ff5 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 137 151 4.6E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_2196 f88b15d77e1f9620c8de300706b51ff5 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 237 248 4.6E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 130 461 1.7E-119 T 12-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 463 7.3E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1287 c4e4545bb1ed69237e91339c68462366 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 4.4E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 4.4E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 4.4E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 4.4E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 Gene3D G3DSA:3.30.565.10 314 467 5.0E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1287 c4e4545bb1ed69237e91339c68462366 476 Gene3D G3DSA:1.10.287.130 237 307 1.9E-21 T 12-10-2018 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 306 1.3E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 SUPERFAMILY SSF55785 126 232 2.66E-7 T 12-10-2018 IPR035965 PAS domain superfamily Acife_1287 c4e4545bb1ed69237e91339c68462366 476 Gene3D G3DSA:3.30.450.20 122 236 7.9E-7 T 12-10-2018 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 SUPERFAMILY SSF47384 225 306 1.43E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 SUPERFAMILY SSF55874 296 467 1.57E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1287 c4e4545bb1ed69237e91339c68462366 476 SMART SM00387 353 465 1.0E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1287 c4e4545bb1ed69237e91339c68462366 476 SMART SM00388 240 307 7.9E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 Pfam PF11808 Domain of unknown function (DUF3329) 68 125 2.0E-7 T 12-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 Acife_1287 c4e4545bb1ed69237e91339c68462366 476 Pfam PF13188 PAS domain 136 183 3.5E-4 T 12-10-2018 IPR000014 PAS domain Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 455 42.975 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 Gene3D G3DSA:1.20.200.10 109 447 3.3E-145 T 12-10-2018 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 TIGRFAM TIGR00838 argH: argininosuccinate lyase 5 457 3.2E-186 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 Pfam PF14698 Argininosuccinate lyase C-terminal 365 432 5.8E-25 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 2.6E-30 T 12-10-2018 IPR000362 Fumarate lyase family Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 2.6E-30 T 12-10-2018 IPR000362 Fumarate lyase family Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 2.6E-30 T 12-10-2018 IPR000362 Fumarate lyase family Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 2.6E-30 T 12-10-2018 IPR000362 Fumarate lyase family Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 SUPERFAMILY SSF48557 8 458 1.52E-148 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 Pfam PF00206 Lyase 8 302 1.2E-80 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 Gene3D G3DSA:1.10.40.30 364 434 3.3E-145 T 12-10-2018 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 Gene3D G3DSA:1.10.275.50 1 108 1.9E-38 T 12-10-2018 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 2.0E-62 T 12-10-2018 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 2.0E-62 T 12-10-2018 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 2.0E-62 T 12-10-2018 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 2.0E-62 T 12-10-2018 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 2.0E-62 T 12-10-2018 Acife_0220 2d47a889bf4049a0ab0d6c5726dc0774 462 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 2.0E-62 T 12-10-2018 Acife_1081 59bc05812004a3b3305d0be565a1debe 247 SUPERFAMILY SSF52172 8 189 1.35E-32 T 12-10-2018 IPR011006 CheY-like superfamily Acife_1081 59bc05812004a3b3305d0be565a1debe 247 SMART SM00862 164 240 1.4E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_1081 59bc05812004a3b3305d0be565a1debe 247 Gene3D G3DSA:3.40.50.2300 1 136 3.6E-30 T 12-10-2018 Acife_1081 59bc05812004a3b3305d0be565a1debe 247 Pfam PF00072 Response regulator receiver domain 11 128 7.2E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1081 59bc05812004a3b3305d0be565a1debe 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 240 2.3E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_1081 59bc05812004a3b3305d0be565a1debe 247 Gene3D G3DSA:1.10.10.10 137 244 1.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1081 59bc05812004a3b3305d0be565a1debe 247 SMART SM00448 9 128 2.2E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1826 64459c974ac64a88d76769da0db45d23 774 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 17 769 1.6E-224 T 12-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Acife_1826 64459c974ac64a88d76769da0db45d23 774 Gene3D G3DSA:3.30.110.120 262 395 2.9E-133 T 12-10-2018 Acife_1826 64459c974ac64a88d76769da0db45d23 774 PIRSF PIRSF006256 11 774 3.8E-277 T 12-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Acife_1826 64459c974ac64a88d76769da0db45d23 774 SUPERFAMILY SSF55821 184 415 1.16E-40 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Acife_1826 64459c974ac64a88d76769da0db45d23 774 Gene3D G3DSA:3.90.870.50 17 386 2.9E-133 T 12-10-2018 Acife_1826 64459c974ac64a88d76769da0db45d23 774 SUPERFAMILY SSF54975 12 99 2.83E-24 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Acife_1826 64459c974ac64a88d76769da0db45d23 774 Gene3D G3DSA:3.30.420.350 510 757 2.3E-124 T 12-10-2018 Acife_1826 64459c974ac64a88d76769da0db45d23 774 Pfam PF01300 Telomere recombination 219 408 2.0E-40 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 Acife_1826 64459c974ac64a88d76769da0db45d23 774 ProSitePatterns PS00150 Acylphosphatase signature 1. 19 29 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Acife_1826 64459c974ac64a88d76769da0db45d23 774 Gene3D G3DSA:3.30.420.360 407 769 2.3E-124 T 12-10-2018 Acife_1826 64459c974ac64a88d76769da0db45d23 774 Pfam PF00708 Acylphosphatase 15 97 5.0E-21 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Acife_1826 64459c974ac64a88d76769da0db45d23 774 Pfam PF07503 HypF finger 167 199 1.8E-12 T 12-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Acife_1826 64459c974ac64a88d76769da0db45d23 774 Pfam PF07503 HypF finger 117 150 6.9E-18 T 12-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Pfam PF04563 RNA polymerase beta subunit 26 508 1.1E-39 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Pfam PF00562 RNA polymerase Rpb2, domain 6 726 1283 3.1E-162 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Gene3D G3DSA:2.40.270.10 799 841 2.4E-7 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1361 12.414 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Pfam PF04565 RNA polymerase Rpb2, domain 3 522 589 2.6E-31 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 SUPERFAMILY SSF64484 12 1361 0.0 T 12-10-2018 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Gene3D G3DSA:2.40.50.100 723 797 1.6E-28 T 12-10-2018 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Gene3D G3DSA:3.90.1100.10 18 179 1.9E-51 T 12-10-2018 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Gene3D G3DSA:3.90.1100.10 652 722 2.3E-20 T 12-10-2018 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1358 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Pfam PF04560 RNA polymerase Rpb2, domain 7 1285 1359 2.8E-26 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Gene3D G3DSA:2.40.270.10 1057 1261 1.5E-87 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Gene3D G3DSA:2.40.50.150 842 963 3.8E-43 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 176 229 1.7E-5 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 367 463 2.7E-15 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Gene3D G3DSA:3.90.1800.10 1271 1322 9.5E-11 T 12-10-2018 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Gene3D G3DSA:3.90.1100.10 451 641 4.9E-71 T 12-10-2018 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Pfam PF10385 RNA polymerase beta subunit external 1 domain 600 665 1.7E-24 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1085 1097 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2717 0fb2e55182b9b667dd4d6ed88cf93d4a 1362 Gene3D G3DSA:3.90.1110.10 327 450 1.3E-34 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2856 daa6bba0cfa8558b1596026fa9fd7e76 250 Pfam PF07072 Cell division protein 16 223 4.4E-46 T 12-10-2018 IPR009777 Cell division protein ZapD Acife_2856 daa6bba0cfa8558b1596026fa9fd7e76 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 248 26.098 T 12-10-2018 IPR009777 Cell division protein ZapD Acife_2856 daa6bba0cfa8558b1596026fa9fd7e76 250 Gene3D G3DSA:1.10.3900.10 10 175 1.7E-57 T 12-10-2018 Acife_2856 daa6bba0cfa8558b1596026fa9fd7e76 250 Gene3D G3DSA:2.60.440.10 3 245 1.7E-57 T 12-10-2018 IPR027462 Z ring-associated protein D, C-terminal Acife_2856 daa6bba0cfa8558b1596026fa9fd7e76 250 SUPERFAMILY SSF160950 1 246 7.32E-58 T 12-10-2018 IPR036268 ZapD domain superfamily Acife_0738 57b3c87ad7a5adc6f68b65332b268760 246 SMART SM00953 86 220 8.7E-7 T 12-10-2018 IPR014914 RES domain Acife_0738 57b3c87ad7a5adc6f68b65332b268760 246 Pfam PF08808 RES domain 78 210 7.7E-19 T 12-10-2018 IPR014914 RES domain Acife_0689 b4da500b89d4dd0a81aa7f68f22d2f6a 418 Gene3D G3DSA:3.40.605.10 19 412 3.5E-158 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Acife_0689 b4da500b89d4dd0a81aa7f68f22d2f6a 418 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 324 346 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Acife_0689 b4da500b89d4dd0a81aa7f68f22d2f6a 418 Gene3D G3DSA:3.40.309.10 227 375 3.5E-158 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Acife_0689 b4da500b89d4dd0a81aa7f68f22d2f6a 418 SUPERFAMILY SSF53720 5 417 5.5E-120 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Acife_0689 b4da500b89d4dd0a81aa7f68f22d2f6a 418 PIRSF PIRSF000151 1 418 5.1E-171 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Acife_0689 b4da500b89d4dd0a81aa7f68f22d2f6a 418 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 417 40.883 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Acife_0689 b4da500b89d4dd0a81aa7f68f22d2f6a 418 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 405 1.5E-139 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Acife_0689 b4da500b89d4dd0a81aa7f68f22d2f6a 418 Pfam PF00171 Aldehyde dehydrogenase family 6 283 1.4E-18 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Acife_0689 b4da500b89d4dd0a81aa7f68f22d2f6a 418 Pfam PF00171 Aldehyde dehydrogenase family 310 374 6.0E-8 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Acife_1617 bb90115569627a63cf31a2afadcc3e8a 111 SUPERFAMILY SSF52833 4 107 4.14E-27 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1617 bb90115569627a63cf31a2afadcc3e8a 111 Gene3D G3DSA:3.40.30.10 4 107 1.6E-32 T 12-10-2018 Acife_2223 e250707f829fc847e9421e25e8aee345 760 SMART SM00471 76 188 3.0E-9 T 12-10-2018 IPR003607 HD/PDEase domain Acife_2223 e250707f829fc847e9421e25e8aee345 760 SUPERFAMILY SSF109604 42 226 4.29E-72 T 12-10-2018 Acife_2223 e250707f829fc847e9421e25e8aee345 760 SUPERFAMILY SSF55021 684 758 4.12E-8 T 12-10-2018 Acife_2223 e250707f829fc847e9421e25e8aee345 760 Pfam PF02824 TGS domain 422 481 2.0E-21 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Acife_2223 e250707f829fc847e9421e25e8aee345 760 Gene3D G3DSA:3.30.460.10 228 360 6.8E-48 T 12-10-2018 Acife_2223 e250707f829fc847e9421e25e8aee345 760 Gene3D G3DSA:3.10.20.30 415 488 1.5E-30 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_2223 e250707f829fc847e9421e25e8aee345 760 Gene3D G3DSA:3.30.70.260 681 760 4.8E-16 T 12-10-2018 Acife_2223 e250707f829fc847e9421e25e8aee345 760 SUPERFAMILY SSF81271 409 481 3.49E-21 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Acife_2223 e250707f829fc847e9421e25e8aee345 760 SUPERFAMILY SSF81301 215 426 1.46E-63 T 12-10-2018 Acife_2223 e250707f829fc847e9421e25e8aee345 760 Gene3D G3DSA:1.10.3210.10 39 225 1.2E-78 T 12-10-2018 Acife_2223 e250707f829fc847e9421e25e8aee345 760 Pfam PF04607 Region found in RelA / SpoT proteins 270 379 2.2E-36 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Acife_2223 e250707f829fc847e9421e25e8aee345 760 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 61 756 8.4E-238 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 Acife_2223 e250707f829fc847e9421e25e8aee345 760 SMART SM00954 270 380 7.6E-65 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Acife_2223 e250707f829fc847e9421e25e8aee345 760 Pfam PF13328 HD domain 61 210 5.9E-53 T 12-10-2018 IPR003607 HD/PDEase domain Acife_2223 e250707f829fc847e9421e25e8aee345 760 Pfam PF13291 ACT domain 680 757 1.6E-17 T 12-10-2018 IPR002912 ACT domain Acife_0435 adfb1bb3a89a4381291052bf029fbdfd 902 SUPERFAMILY SSF52540 446 636 1.06E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0435 adfb1bb3a89a4381291052bf029fbdfd 902 Pfam PF13538 UvrD-like helicase C-terminal domain 819 863 2.5E-11 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain Acife_0435 adfb1bb3a89a4381291052bf029fbdfd 902 Gene3D G3DSA:3.40.50.300 460 661 5.4E-26 T 12-10-2018 Acife_0435 adfb1bb3a89a4381291052bf029fbdfd 902 Pfam PF13604 AAA domain 503 661 1.0E-19 T 12-10-2018 Acife_0435 adfb1bb3a89a4381291052bf029fbdfd 902 Gene3D G3DSA:3.40.50.300 799 879 4.6E-15 T 12-10-2018 Acife_0435 adfb1bb3a89a4381291052bf029fbdfd 902 SUPERFAMILY SSF52540 607 874 3.28E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0435 adfb1bb3a89a4381291052bf029fbdfd 902 SMART SM00382 511 752 4.7E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2926 127c955c3ed1eeecc72c7698317d72c2 232 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 11 114 30.52 T 12-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Acife_2926 127c955c3ed1eeecc72c7698317d72c2 232 SUPERFAMILY SSF101386 129 217 2.4E-23 T 12-10-2018 Acife_2926 127c955c3ed1eeecc72c7698317d72c2 232 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 130 213 1.9E-28 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Acife_2926 127c955c3ed1eeecc72c7698317d72c2 232 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 60 110 6.0E-18 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Acife_2926 127c955c3ed1eeecc72c7698317d72c2 232 Gene3D G3DSA:3.10.20.400 4 101 4.6E-39 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Acife_2926 127c955c3ed1eeecc72c7698317d72c2 232 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 37 110 1.5E-33 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Acife_2926 127c955c3ed1eeecc72c7698317d72c2 232 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 132 216 1.3E-13 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Acife_2926 127c955c3ed1eeecc72c7698317d72c2 232 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 127 213 19.609 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Acife_2926 127c955c3ed1eeecc72c7698317d72c2 232 Gene3D G3DSA:1.10.287.1080 127 219 1.0E-29 T 12-10-2018 Acife_2926 127c955c3ed1eeecc72c7698317d72c2 232 SUPERFAMILY SSF141734 11 113 3.14E-46 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Acife_2926 127c955c3ed1eeecc72c7698317d72c2 232 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 218 34.959 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 Acife_0171 a6c0722b41d1663eae8c98de6b2aaeb5 208 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 48 208 1.1E-44 T 12-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 Acife_0171 a6c0722b41d1663eae8c98de6b2aaeb5 208 SUPERFAMILY SSF47240 49 181 5.04E-16 T 12-10-2018 IPR009078 Ferritin-like superfamily Acife_0171 a6c0722b41d1663eae8c98de6b2aaeb5 208 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 7 208 27.066 T 12-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 Acife_1523 cb29c6a8ac8e096b2a54f5d3b53387f1 362 SUPERFAMILY SSF53850 41 362 5.62E-81 T 12-10-2018 Acife_1523 cb29c6a8ac8e096b2a54f5d3b53387f1 362 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 42 361 3.7E-103 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Acife_1523 cb29c6a8ac8e096b2a54f5d3b53387f1 362 Pfam PF12849 PBP superfamily domain 34 328 9.8E-51 T 12-10-2018 IPR024370 PBP domain Acife_1523 cb29c6a8ac8e096b2a54f5d3b53387f1 362 Gene3D G3DSA:3.40.190.10 44 349 1.9E-102 T 12-10-2018 Acife_1523 cb29c6a8ac8e096b2a54f5d3b53387f1 362 PIRSF PIRSF002756 9 362 3.6E-83 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Acife_1523 cb29c6a8ac8e096b2a54f5d3b53387f1 362 Gene3D G3DSA:3.40.190.10 116 299 1.9E-102 T 12-10-2018 Acife_1028 88e527c48de58876589905a494b0f0c9 323 Gene3D G3DSA:1.10.287.90 32 115 4.9E-22 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1028 88e527c48de58876589905a494b0f0c9 323 SUPERFAMILY SSF81464 21 120 7.36E-17 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1028 88e527c48de58876589905a494b0f0c9 323 Gene3D G3DSA:2.60.40.420 123 292 5.4E-46 T 12-10-2018 IPR008972 Cupredoxin Acife_1028 88e527c48de58876589905a494b0f0c9 323 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 159 234 4.4E-9 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1028 88e527c48de58876589905a494b0f0c9 323 SUPERFAMILY SSF49503 134 291 1.63E-42 T 12-10-2018 IPR008972 Cupredoxin Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.1E-9 T 12-10-2018 Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 340 362 6.1E-9 T 12-10-2018 Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 SUPERFAMILY SSF56425 223 338 1.33E-37 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 Gene3D G3DSA:3.90.700.10 233 343 6.6E-148 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 SUPERFAMILY SSF51905 4 390 5.86E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 Gene3D G3DSA:1.20.58.100 412 519 5.1E-22 T 12-10-2018 Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 Pfam PF02910 Fumarate reductase flavoprotein C-term 425 503 2.6E-11 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 355 362 6.8E-5 T 12-10-2018 Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.8E-5 T 12-10-2018 Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 5 502 4.6E-171 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 Gene3D G3DSA:3.50.50.60 5 385 6.6E-148 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 SUPERFAMILY SSF46977 419 505 1.7E-22 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Acife_1766 c493c810e02c55be30e6aa8b0b8736e4 529 Pfam PF00890 FAD binding domain 5 377 1.5E-93 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Acife_0054 10e97edbb7b7f6260ede020687723a37 425 SUPERFAMILY SSF55874 280 422 7.2E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0054 10e97edbb7b7f6260ede020687723a37 425 Gene3D G3DSA:1.10.287.130 159 272 1.9E-16 T 12-10-2018 Acife_0054 10e97edbb7b7f6260ede020687723a37 425 SMART SM00387 319 424 4.1E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0054 10e97edbb7b7f6260ede020687723a37 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 402 7.4E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0054 10e97edbb7b7f6260ede020687723a37 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 7.4E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0054 10e97edbb7b7f6260ede020687723a37 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 422 2.5E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0054 10e97edbb7b7f6260ede020687723a37 425 Gene3D G3DSA:3.30.565.10 278 425 5.1E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0054 10e97edbb7b7f6260ede020687723a37 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 272 3.1E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_0054 10e97edbb7b7f6260ede020687723a37 425 Pfam PF00672 HAMP domain 162 212 1.4E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_0054 10e97edbb7b7f6260ede020687723a37 425 SMART SM00304 162 215 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_0054 10e97edbb7b7f6260ede020687723a37 425 SUPERFAMILY SSF47384 199 273 1.24E-8 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_0054 10e97edbb7b7f6260ede020687723a37 425 SMART SM00388 216 276 1.9E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2444 6c005335f88b8070f8e02ec5207a38db 88 Gene3D G3DSA:2.30.30.90 6 82 6.8E-14 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain Acife_2444 6c005335f88b8070f8e02ec5207a38db 88 SMART SM00899 5 76 1.1E-7 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Acife_2444 6c005335f88b8070f8e02ec5207a38db 88 Pfam PF04023 FeoA domain 8 75 6.7E-12 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Acife_2444 6c005335f88b8070f8e02ec5207a38db 88 SUPERFAMILY SSF50037 9 76 4.88E-10 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal Acife_2546 9daa00779ea0a31b61519068e39607e2 163 Pfam PF12838 4Fe-4S dicluster domain 63 116 2.5E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_2546 9daa00779ea0a31b61519068e39607e2 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_2546 9daa00779ea0a31b61519068e39607e2 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 147 27.644 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2546 9daa00779ea0a31b61519068e39607e2 163 Gene3D G3DSA:3.30.70.3270 37 163 1.7E-37 T 12-10-2018 Acife_2546 9daa00779ea0a31b61519068e39607e2 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 3.3E-44 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2546 9daa00779ea0a31b61519068e39607e2 163 SUPERFAMILY SSF54862 37 146 2.59E-25 T 12-10-2018 Acife_3185 97f64b4254bbf3bdc85fc20fbcfa22e0 445 SMART SM00220 4 250 1.8E-11 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Acife_3185 97f64b4254bbf3bdc85fc20fbcfa22e0 445 SUPERFAMILY SSF56112 6 247 1.52E-37 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Acife_3185 97f64b4254bbf3bdc85fc20fbcfa22e0 445 Gene3D G3DSA:1.10.510.10 97 253 3.7E-26 T 12-10-2018 Acife_3185 97f64b4254bbf3bdc85fc20fbcfa22e0 445 Pfam PF00069 Protein kinase domain 7 210 3.9E-25 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Acife_3185 97f64b4254bbf3bdc85fc20fbcfa22e0 445 Gene3D G3DSA:3.30.200.20 2 84 3.8E-6 T 12-10-2018 Acife_1149 337be828b719078035459b6edba3fa41 302 Pfam PF14236 Domain of unknown function (DUF4338) 67 299 2.3E-67 T 12-10-2018 IPR025639 Domain of unknown function DUF4338 Acife_2982 337be828b719078035459b6edba3fa41 302 Pfam PF14236 Domain of unknown function (DUF4338) 67 299 2.3E-67 T 12-10-2018 IPR025639 Domain of unknown function DUF4338 Acife_2726 cb06282ec2f2cb3ec0b7ea8a5265d34c 560 SUPERFAMILY SSF56112 97 435 9.69E-39 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Acife_2726 cb06282ec2f2cb3ec0b7ea8a5265d34c 560 Pfam PF03109 ABC1 family 115 234 3.7E-35 T 12-10-2018 IPR004147 UbiB domain Acife_2726 cb06282ec2f2cb3ec0b7ea8a5265d34c 560 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 8 443 3.3E-167 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Acife_1194 9d12dccfdc7b23db04a687598c6ac6fb 484 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 18 484 2.2E-156 T 12-10-2018 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 Acife_1194 9d12dccfdc7b23db04a687598c6ac6fb 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 484 1.6E-119 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Acife_1194 9d12dccfdc7b23db04a687598c6ac6fb 484 Pfam PF13727 CoA-binding domain 82 181 5.7E-6 T 12-10-2018 Acife_1194 9d12dccfdc7b23db04a687598c6ac6fb 484 Pfam PF02397 Bacterial sugar transferase 287 478 2.4E-64 T 12-10-2018 IPR003362 Bacterial sugar transferase Acife_1273 3e2fadd2e436e856edf42e7792704850 378 Gene3D G3DSA:3.90.550.10 32 258 1.8E-18 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1273 3e2fadd2e436e856edf42e7792704850 378 SUPERFAMILY SSF53448 42 298 6.0E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1273 3e2fadd2e436e856edf42e7792704850 378 TIGRFAM TIGR03472 HpnI: hopanoid biosynthesis associated glycosyl transferase protein HpnI 2 373 7.1E-141 T 12-10-2018 IPR017835 Hopanoid biosynthesis associated glycosyltransferase, HpnI Acife_1273 3e2fadd2e436e856edf42e7792704850 378 Pfam PF13506 Glycosyl transferase family 21 101 272 1.2E-43 T 12-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 Acife_2125 448fb27d83391f76fb32d808242bf149 656 SUPERFAMILY SSF56719 401 647 7.59E-70 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Acife_2125 448fb27d83391f76fb32d808242bf149 656 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 140 8.2E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_2125 448fb27d83391f76fb32d808242bf149 656 Gene3D G3DSA:3.40.50.670 403 649 5.3E-81 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR00418 DNA topoisomerase II family signature 516 533 1.2E-58 T 12-10-2018 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR00418 DNA topoisomerase II family signature 586 602 1.2E-58 T 12-10-2018 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR00418 DNA topoisomerase II family signature 279 292 1.2E-58 T 12-10-2018 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR00418 DNA topoisomerase II family signature 498 514 1.2E-58 T 12-10-2018 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR00418 DNA topoisomerase II family signature 427 441 1.2E-58 T 12-10-2018 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR00418 DNA topoisomerase II family signature 111 125 1.2E-58 T 12-10-2018 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR00418 DNA topoisomerase II family signature 29 44 1.2E-58 T 12-10-2018 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR00418 DNA topoisomerase II family signature 536 548 1.2E-58 T 12-10-2018 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR00418 DNA topoisomerase II family signature 64 77 1.2E-58 T 12-10-2018 Acife_2125 448fb27d83391f76fb32d808242bf149 656 SUPERFAMILY SSF54211 225 400 7.97E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2125 448fb27d83391f76fb32d808242bf149 656 Gene3D G3DSA:3.30.565.10 1 216 1.4E-61 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_2125 448fb27d83391f76fb32d808242bf149 656 SMART SM00433 32 653 9.0E-166 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_2125 448fb27d83391f76fb32d808242bf149 656 Pfam PF00204 DNA gyrase B 225 398 8.2E-40 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_2125 448fb27d83391f76fb32d808242bf149 656 SUPERFAMILY SSF55874 3 215 1.83E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_2125 448fb27d83391f76fb32d808242bf149 656 Gene3D G3DSA:3.30.230.10 223 402 3.1E-45 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Acife_2125 448fb27d83391f76fb32d808242bf149 656 Pfam PF01751 Toprim domain 426 538 6.9E-12 T 12-10-2018 IPR006171 TOPRIM domain Acife_2125 448fb27d83391f76fb32d808242bf149 656 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 582 646 7.2E-22 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR01098 Topoisomerase IV subunit B signature 375 400 5.5E-33 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR01098 Topoisomerase IV subunit B signature 157 172 5.5E-33 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR01098 Topoisomerase IV subunit B signature 351 374 5.5E-33 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR01098 Topoisomerase IV subunit B signature 24 37 5.5E-33 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR01098 Topoisomerase IV subunit B signature 182 199 5.5E-33 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR01098 Topoisomerase IV subunit B signature 324 339 5.5E-33 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR01098 Topoisomerase IV subunit B signature 307 323 5.5E-33 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_2125 448fb27d83391f76fb32d808242bf149 656 PRINTS PR01098 Topoisomerase IV subunit B signature 461 482 5.5E-33 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_2125 448fb27d83391f76fb32d808242bf149 656 SMART SM00387 25 181 1.1E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_2125 448fb27d83391f76fb32d808242bf149 656 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 SUPERFAMILY SSF48557 3 429 1.01E-131 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 Pfam PF00206 Lyase 6 282 5.0E-56 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 1.2E-27 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 429 1.4E-157 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 SMART SM00998 349 429 5.7E-39 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 1.1E-28 T 12-10-2018 IPR000362 Fumarate lyase family Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 1.1E-28 T 12-10-2018 IPR000362 Fumarate lyase family Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.1E-28 T 12-10-2018 IPR000362 Fumarate lyase family Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 1.1E-28 T 12-10-2018 IPR000362 Fumarate lyase family Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 Gene3D G3DSA:1.20.200.10 93 347 3.2E-93 T 12-10-2018 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 Gene3D G3DSA:1.10.40.30 349 430 3.0E-30 T 12-10-2018 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 2.0E-10 T 12-10-2018 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 2.0E-10 T 12-10-2018 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 2.0E-10 T 12-10-2018 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 2.0E-10 T 12-10-2018 Acife_2408 3f7fa7c5348db34890f6802598d5609c 435 Gene3D G3DSA:1.10.275.10 1 92 2.6E-34 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal Acife_0648 af0163523808df5510680c39e6dd83b0 333 Gene3D G3DSA:3.40.50.1580 39 332 7.0E-19 T 12-10-2018 Acife_0648 af0163523808df5510680c39e6dd83b0 333 SUPERFAMILY SSF53167 39 294 5.44E-9 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Acife_0648 af0163523808df5510680c39e6dd83b0 333 Pfam PF06516 Purine nucleoside permease (NUP) 38 331 3.2E-48 T 12-10-2018 IPR009486 Purine nucleoside permease GO:0055085 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 156 3.8E-33 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 Gene3D G3DSA:1.10.1040.10 186 333 4.2E-48 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 SUPERFAMILY SSF48179 176 328 2.21E-51 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 319 34.198 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 177 314 3.3E-46 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 Gene3D G3DSA:3.40.50.720 1 185 2.7E-41 T 12-10-2018 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 PIRSF PIRSF000114 1 329 6.3E-84 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 130 150 3.0E-36 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 170 194 3.0E-36 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 235 252 3.0E-36 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 3.0E-36 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 55 82 3.0E-36 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 195 219 3.0E-36 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Acife_1268 80db659b7d89cc6e80cc040e2a83e1b9 342 SUPERFAMILY SSF51735 4 177 1.23E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0725 db7ca1f478ddbfc83f320ac62d5dc37e 159 Gene3D G3DSA:2.10.109.10 45 159 1.1E-43 T 12-10-2018 Acife_0725 db7ca1f478ddbfc83f320ac62d5dc37e 159 SUPERFAMILY SSF51306 35 157 4.36E-36 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Acife_0725 db7ca1f478ddbfc83f320ac62d5dc37e 159 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 83 94 2.1E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Acife_0725 db7ca1f478ddbfc83f320ac62d5dc37e 159 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 72 82 2.1E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Acife_0725 db7ca1f478ddbfc83f320ac62d5dc37e 159 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 123 2.1E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Acife_0725 db7ca1f478ddbfc83f320ac62d5dc37e 159 Pfam PF00717 Peptidase S24-like 75 140 4.8E-12 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Acife_3137 85cc3ef08bed1a504aaf5921268edc3f 147 SUPERFAMILY SSF47240 1 138 4.27E-28 T 12-10-2018 IPR009078 Ferritin-like superfamily Acife_3137 85cc3ef08bed1a504aaf5921268edc3f 147 PIRSF PIRSF002560 1 143 6.1E-24 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Acife_3137 85cc3ef08bed1a504aaf5921268edc3f 147 PRINTS PR00601 Bacterioferritin signature 3 22 4.7E-13 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Acife_3137 85cc3ef08bed1a504aaf5921268edc3f 147 PRINTS PR00601 Bacterioferritin signature 23 43 4.7E-13 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Acife_3137 85cc3ef08bed1a504aaf5921268edc3f 147 PRINTS PR00601 Bacterioferritin signature 44 64 4.7E-13 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Acife_3137 85cc3ef08bed1a504aaf5921268edc3f 147 PRINTS PR00601 Bacterioferritin signature 65 85 4.7E-13 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Acife_3137 85cc3ef08bed1a504aaf5921268edc3f 147 PRINTS PR00601 Bacterioferritin signature 107 127 4.7E-13 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Acife_3137 85cc3ef08bed1a504aaf5921268edc3f 147 PRINTS PR00601 Bacterioferritin signature 86 106 4.7E-13 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Acife_3137 85cc3ef08bed1a504aaf5921268edc3f 147 Pfam PF00210 Ferritin-like domain 11 138 2.3E-19 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Acife_3137 85cc3ef08bed1a504aaf5921268edc3f 147 Gene3D G3DSA:1.20.1260.10 1 144 5.3E-35 T 12-10-2018 IPR012347 Ferritin-like Acife_2685 3fed46c67a88c1b0110bded1050abe48 131 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 128 2.8E-56 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2685 3fed46c67a88c1b0110bded1050abe48 131 ProSitePatterns PS00054 Ribosomal protein S11 signature. 99 121 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site Acife_2685 3fed46c67a88c1b0110bded1050abe48 131 PIRSF PIRSF002131 1 131 1.5E-53 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Acife_2685 3fed46c67a88c1b0110bded1050abe48 131 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 131 33.066 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Acife_2685 3fed46c67a88c1b0110bded1050abe48 131 Pfam PF00411 Ribosomal protein S11 21 130 2.8E-50 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Acife_2685 3fed46c67a88c1b0110bded1050abe48 131 Gene3D G3DSA:3.30.420.80 3 131 1.4E-54 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Acife_2685 3fed46c67a88c1b0110bded1050abe48 131 SUPERFAMILY SSF53137 15 131 4.14E-48 T 12-10-2018 Acife_0674 ac6be1c39bbe8e14045cd0b7c40393cc 336 SUPERFAMILY SSF140931 252 293 5.75E-8 T 12-10-2018 IPR036597 Fido-like domain superfamily Acife_0674 ac6be1c39bbe8e14045cd0b7c40393cc 336 Gene3D G3DSA:1.20.120.1870 204 328 3.4E-16 T 12-10-2018 Acife_0674 ac6be1c39bbe8e14045cd0b7c40393cc 336 Pfam PF13310 Virulence protein RhuM family 66 139 1.4E-25 T 12-10-2018 IPR011204 Virulence protein RhuM-like Acife_0674 ac6be1c39bbe8e14045cd0b7c40393cc 336 Pfam PF02661 Fic/DOC family 234 286 5.1E-9 T 12-10-2018 IPR003812 Fido domain Acife_1707 ce9c9db2ad1cc2002224df289ced9db5 655 ProSitePatterns PS00455 Putative AMP-binding domain signature. 267 278 - T 12-10-2018 IPR020845 AMP-binding, conserved site Acife_1707 ce9c9db2ad1cc2002224df289ced9db5 655 SUPERFAMILY SSF56801 26 633 3.92E-182 T 12-10-2018 Acife_1707 ce9c9db2ad1cc2002224df289ced9db5 655 Pfam PF00501 AMP-binding enzyme 96 530 9.0E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Acife_1707 ce9c9db2ad1cc2002224df289ced9db5 655 Gene3D G3DSA:3.40.50.12780 61 523 4.3E-113 T 12-10-2018 Acife_1707 ce9c9db2ad1cc2002224df289ced9db5 655 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 10 654 52.407 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Acife_1707 ce9c9db2ad1cc2002224df289ced9db5 655 Pfam PF13193 AMP-binding enzyme C-terminal domain 539 619 1.7E-27 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Acife_1707 ce9c9db2ad1cc2002224df289ced9db5 655 Gene3D G3DSA:3.30.300.30 526 655 6.5E-29 T 12-10-2018 Acife_1707 ce9c9db2ad1cc2002224df289ced9db5 655 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 28 651 1.7E-299 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Acife_1707 ce9c9db2ad1cc2002224df289ced9db5 655 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 34 87 6.8E-18 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Acife_3012 a477e8454518c1a6896d96a75527a806 181 Pfam PF13098 Thioredoxin-like domain 41 169 1.3E-8 T 12-10-2018 IPR012336 Thioredoxin-like fold Acife_3012 a477e8454518c1a6896d96a75527a806 181 SUPERFAMILY SSF52833 11 176 9.14E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_3012 a477e8454518c1a6896d96a75527a806 181 Gene3D G3DSA:3.40.30.10 35 179 6.5E-21 T 12-10-2018 Acife_0138 da0ad1b83a33b1cca65dfe39f879546e 136 TIGRFAM TIGR02801 tolR: protein TolR 7 131 3.0E-41 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Acife_0138 da0ad1b83a33b1cca65dfe39f879546e 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 4 133 4.7E-25 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Acife_0138 da0ad1b83a33b1cca65dfe39f879546e 136 Gene3D G3DSA:3.30.420.270 55 129 1.9E-13 T 12-10-2018 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 Pfam PF04324 BFD-like [2Fe-2S] binding domain 874 920 3.2E-9 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 Pfam PF00384 Molybdopterin oxidoreductase 73 498 1.7E-83 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 SUPERFAMILY SSF53706 16 596 2.75E-184 T 12-10-2018 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 19 37 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 Gene3D G3DSA:3.40.50.740 80 569 8.8E-182 T 12-10-2018 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 Gene3D G3DSA:1.10.10.1100 873 926 3.6E-10 T 12-10-2018 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 Gene3D G3DSA:2.40.40.20 603 730 1.7E-40 T 12-10-2018 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 Gene3D G3DSA:2.20.25.90 14 67 6.4E-16 T 12-10-2018 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 SUPERFAMILY SSF50692 586 730 1.18E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 Gene3D G3DSA:3.40.228.10 151 352 8.8E-182 T 12-10-2018 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 18 63 7.2E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 445 462 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 SMART SM00926 14 69 1.7E-15 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2078 0b87ebafe823a452eff4e1badae9a68f 928 Pfam PF01568 Molydopterin dinucleotide binding domain 613 723 2.0E-27 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Acife_2721 55dd1dc2893d85f9e4b71457d5d81eee 142 Gene3D G3DSA:3.30.1550.10 2 72 3.3E-33 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Acife_2721 55dd1dc2893d85f9e4b71457d5d81eee 142 Gene3D G3DSA:1.10.10.250 73 141 3.6E-28 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Acife_2721 55dd1dc2893d85f9e4b71457d5d81eee 142 SUPERFAMILY SSF54747 3 73 3.66E-29 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Acife_2721 55dd1dc2893d85f9e4b71457d5d81eee 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.887 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Acife_2721 55dd1dc2893d85f9e4b71457d5d81eee 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2721 55dd1dc2893d85f9e4b71457d5d81eee 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.7E-64 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2721 55dd1dc2893d85f9e4b71457d5d81eee 142 SUPERFAMILY SSF46906 68 141 2.75E-26 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Acife_2721 55dd1dc2893d85f9e4b71457d5d81eee 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-14 T 12-10-2018 Acife_2721 55dd1dc2893d85f9e4b71457d5d81eee 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.3E-26 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal Acife_2721 55dd1dc2893d85f9e4b71457d5d81eee 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.1E-24 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Acife_2721 55dd1dc2893d85f9e4b71457d5d81eee 142 SMART SM00649 9 141 2.0E-80 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Acife_2001 6f93a46d4d2e8e881776a4205482b3dd 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 7 225 1.6E-84 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Acife_2001 6f93a46d4d2e8e881776a4205482b3dd 235 Gene3D G3DSA:3.40.50.150 7 231 1.6E-74 T 12-10-2018 Acife_2001 6f93a46d4d2e8e881776a4205482b3dd 235 Pfam PF13489 Methyltransferase domain 47 188 3.8E-21 T 12-10-2018 Acife_2001 6f93a46d4d2e8e881776a4205482b3dd 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 7 231 37.323 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Acife_2001 6f93a46d4d2e8e881776a4205482b3dd 235 SUPERFAMILY SSF53335 11 228 1.62E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0136 75fccb24de5edc8f2b162276da978bcb 423 Gene3D G3DSA:3.40.50.10070 22 162 8.7E-35 T 12-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 Acife_0136 75fccb24de5edc8f2b162276da978bcb 423 SUPERFAMILY SSF69304 154 422 6.93E-50 T 12-10-2018 Acife_0136 75fccb24de5edc8f2b162276da978bcb 423 SUPERFAMILY SSF52964 31 159 4.18E-31 T 12-10-2018 Acife_0136 75fccb24de5edc8f2b162276da978bcb 423 Gene3D G3DSA:2.120.10.30 163 423 2.9E-77 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Acife_0136 75fccb24de5edc8f2b162276da978bcb 423 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 18 422 2.5E-146 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Acife_0136 75fccb24de5edc8f2b162276da978bcb 423 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 7 421 41.631 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Acife_0136 75fccb24de5edc8f2b162276da978bcb 423 Pfam PF07676 WD40-like Beta Propeller Repeat 198 223 0.13 T 12-10-2018 IPR011659 WD40-like Beta Propeller Acife_0136 75fccb24de5edc8f2b162276da978bcb 423 Pfam PF07676 WD40-like Beta Propeller Repeat 276 310 2.0E-13 T 12-10-2018 IPR011659 WD40-like Beta Propeller Acife_0136 75fccb24de5edc8f2b162276da978bcb 423 Pfam PF07676 WD40-like Beta Propeller Repeat 238 267 0.13 T 12-10-2018 IPR011659 WD40-like Beta Propeller Acife_0136 75fccb24de5edc8f2b162276da978bcb 423 Pfam PF04052 TolB amino-terminal domain 26 127 2.7E-23 T 12-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 PIRSF PIRSF500134 2 434 3.5E-157 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 Gene3D G3DSA:3.40.50.720 231 434 9.4E-69 T 12-10-2018 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 3 415 1.0E-146 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 PIRSF PIRSF000124 1 434 1.9E-135 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 Gene3D G3DSA:3.40.50.720 1 198 4.0E-71 T 12-10-2018 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 SUPERFAMILY SSF51735 2 191 1.03E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 SMART SM00984 315 419 4.8E-40 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 Gene3D G3DSA:1.20.5.100 200 230 2.2E-16 T 12-10-2018 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 SUPERFAMILY SSF48179 200 293 1.46E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 292 8.2E-34 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 184 3.0E-58 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 SUPERFAMILY SSF52413 304 429 6.54E-35 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Acife_1003 7377ff2d05562423f3b1cdb6d74a350a 434 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 418 1.2E-29 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Acife_1585 0044b64a2f12a3a7b04f24aa49474bf1 371 SUPERFAMILY SSF52540 114 340 2.39E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1585 0044b64a2f12a3a7b04f24aa49474bf1 371 Gene3D G3DSA:3.40.50.300 113 346 3.2E-22 T 12-10-2018 Acife_1585 0044b64a2f12a3a7b04f24aa49474bf1 371 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 118 340 7.4E-8 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Acife_1450 24d0ecc792e999456b2ef3a56c86db5c 118 SUPERFAMILY SSF141371 15 110 2.04E-5 T 12-10-2018 Acife_1450 24d0ecc792e999456b2ef3a56c86db5c 118 Gene3D G3DSA:2.40.10.220 5 115 5.7E-28 T 12-10-2018 Acife_1450 24d0ecc792e999456b2ef3a56c86db5c 118 Pfam PF07238 PilZ domain 14 103 5.2E-10 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 830 844 8.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 863 881 8.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 888 901 8.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 848 858 8.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 SMART SM00387 793 904 1.7E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 Gene3D G3DSA:3.30.565.10 755 906 2.9E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 Gene3D G3DSA:1.10.287.130 673 751 7.3E-15 T 12-10-2018 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 795 903 3.8E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 SUPERFAMILY SSF52540 34 185 2.44E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 Gene3D G3DSA:3.30.450.40 525 672 2.5E-26 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 Pfam PF00512 His Kinase A (phospho-acceptor) domain 684 749 8.8E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 SUPERFAMILY SSF55781 522 665 1.85E-8 T 12-10-2018 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 SUPERFAMILY SSF47384 677 750 4.9E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 28 237 2.8E-91 T 12-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 SMART SM00388 682 749 2.1E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 Gene3D G3DSA:3.40.50.300 26 236 3.0E-91 T 12-10-2018 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 SUPERFAMILY SSF52402 259 382 5.13E-7 T 12-10-2018 Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 Gene3D G3DSA:1.20.120.620 414 516 2.6E-5 T 12-10-2018 IPR038318 KdpD, transmembrane domain superfamily Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 Pfam PF13493 Domain of unknown function (DUF4118) 424 520 3.7E-7 T 12-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 SUPERFAMILY SSF55874 739 904 1.57E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1080 1c644939d47658ddbab3d8fd9fb68338 913 Gene3D G3DSA:3.40.50.620 245 382 1.2E-5 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_0192 045d5e707d14ba7e324eacbdb3c3557a 242 SUPERFAMILY SSF88697 5 68 8.45E-10 T 12-10-2018 IPR015947 PUA-like superfamily Acife_0192 045d5e707d14ba7e324eacbdb3c3557a 242 Pfam PF04452 RNA methyltransferase 25 237 2.4E-56 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Acife_0192 045d5e707d14ba7e324eacbdb3c3557a 242 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 7 242 5.0E-44 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Acife_0192 045d5e707d14ba7e324eacbdb3c3557a 242 PIRSF PIRSF015601 3 242 3.4E-45 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Acife_0192 045d5e707d14ba7e324eacbdb3c3557a 242 Gene3D G3DSA:3.40.1280.10 5 240 1.1E-62 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Acife_0192 045d5e707d14ba7e324eacbdb3c3557a 242 SUPERFAMILY SSF75217 75 242 7.85E-44 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Acife_3280 ce096f3ad05e86727c162b735a9dc6bd 675 Gene3D G3DSA:3.20.70.20 145 674 1.0E-108 T 12-10-2018 Acife_3280 ce096f3ad05e86727c162b735a9dc6bd 675 SUPERFAMILY SSF51998 133 667 5.49E-160 T 12-10-2018 Acife_3280 ce096f3ad05e86727c162b735a9dc6bd 675 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 132 672 3.1E-138 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Acife_3280 ce096f3ad05e86727c162b735a9dc6bd 675 Pfam PF03477 ATP cone domain 15 103 3.1E-19 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Acife_3280 ce096f3ad05e86727c162b735a9dc6bd 675 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 133 672 1.9E-171 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Acife_2359 b6defdbf269f613a369bbe653e7a56e2 189 Pfam PF02525 Flavodoxin-like fold 1 168 5.4E-38 T 12-10-2018 IPR003680 Flavodoxin-like fold Acife_2359 b6defdbf269f613a369bbe653e7a56e2 189 Gene3D G3DSA:3.40.50.360 1 184 3.3E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Acife_2359 b6defdbf269f613a369bbe653e7a56e2 189 SUPERFAMILY SSF52218 1 186 7.18E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 ProSitePatterns PS00113 Adenylate kinase signature. 85 96 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 Pfam PF05191 Adenylate kinase, active site lid 131 166 8.3E-15 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 Hamap MF_00235 Adenylate kinase [adk]. 5 217 43.987 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 SUPERFAMILY SSF52540 6 217 1.41E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 Pfam PF00406 Adenylate kinase 10 192 1.2E-47 T 12-10-2018 Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 TIGRFAM TIGR01351 adk: adenylate kinase 7 216 2.3E-72 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 PRINTS PR00094 Adenylate kinase signature 36 50 3.4E-30 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 PRINTS PR00094 Adenylate kinase signature 164 179 3.4E-30 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 PRINTS PR00094 Adenylate kinase signature 181 195 3.4E-30 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 PRINTS PR00094 Adenylate kinase signature 85 101 3.4E-30 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 PRINTS PR00094 Adenylate kinase signature 8 21 3.4E-30 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Acife_2689 bd11b610775d86ac5c64db2b8e60ec4f 220 Gene3D G3DSA:3.40.50.300 3 219 2.2E-70 T 12-10-2018 Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 Pfam PF01011 PQQ enzyme repeat 90 117 8.3E-7 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 SMART SM00564 338 370 16.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 SMART SM00564 84 116 4.2E-6 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 SMART SM00564 192 224 2.3E-5 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 SMART SM00564 235 268 49.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 SMART SM00564 379 410 72.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 SMART SM00564 129 184 58.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 Gene3D G3DSA:2.130.10.10 51 150 9.1E-13 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 Gene3D G3DSA:2.130.10.10 151 331 8.0E-27 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 SUPERFAMILY SSF50998 29 439 4.97E-41 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 Gene3D G3DSA:2.130.10.10 333 443 1.9E-13 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 Pfam PF13360 PQQ-like domain 168 271 8.9E-15 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Acife_2602 630e114693f6556ba7cee34ee8eb351b 449 Pfam PF13360 PQQ-like domain 308 413 1.5E-10 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Acife_0113 532c40003b081d0d311acb252bf51e3e 1130 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 10 806 2.8E-243 T 12-10-2018 Acife_0113 532c40003b081d0d311acb252bf51e3e 1130 SUPERFAMILY SSF52540 375 807 2.12E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0113 532c40003b081d0d311acb252bf51e3e 1130 SUPERFAMILY SSF52980 821 1121 2.52E-37 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Acife_0113 532c40003b081d0d311acb252bf51e3e 1130 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 10 1060 1.0E-271 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Acife_0113 532c40003b081d0d311acb252bf51e3e 1130 PIRSF PIRSF000980 9 1083 3.5E-282 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Acife_0113 532c40003b081d0d311acb252bf51e3e 1130 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 9 1124 18.498 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Acife_0113 532c40003b081d0d311acb252bf51e3e 1130 Gene3D G3DSA:1.10.486.10 452 661 1.5E-154 T 12-10-2018 Acife_0113 532c40003b081d0d311acb252bf51e3e 1130 Gene3D G3DSA:3.40.50.300 376 806 1.5E-154 T 12-10-2018 Acife_0113 532c40003b081d0d311acb252bf51e3e 1130 SUPERFAMILY SSF52540 9 366 1.81E-91 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0113 532c40003b081d0d311acb252bf51e3e 1130 Gene3D G3DSA:1.10.10.160 86 209 7.4E-104 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily Acife_0113 532c40003b081d0d311acb252bf51e3e 1130 Gene3D G3DSA:3.40.50.10930 12 326 7.4E-104 T 12-10-2018 Acife_2730 c31e3e22ea86fdd37a4f88c0993afaa5 147 SUPERFAMILY SSF48013 4 138 1.09E-33 T 12-10-2018 IPR035926 NusB-like superfamily Acife_2730 c31e3e22ea86fdd37a4f88c0993afaa5 147 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 136 2.2E-38 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 Acife_2730 c31e3e22ea86fdd37a4f88c0993afaa5 147 Pfam PF01029 NusB family 9 134 8.6E-29 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Acife_2730 c31e3e22ea86fdd37a4f88c0993afaa5 147 Gene3D G3DSA:1.10.940.10 1 142 4.3E-42 T 12-10-2018 IPR035926 NusB-like superfamily Acife_2730 c31e3e22ea86fdd37a4f88c0993afaa5 147 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 138 21.109 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 Acife_1620 ad63581498d6cc94ce20d8f93a981c2a 364 SUPERFAMILY SSF52402 27 226 3.56E-49 T 12-10-2018 Acife_1620 ad63581498d6cc94ce20d8f93a981c2a 364 Gene3D G3DSA:3.40.50.1220 229 362 7.2E-54 T 12-10-2018 Acife_1620 ad63581498d6cc94ce20d8f93a981c2a 364 SMART SM00893 29 221 2.0E-38 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Acife_1620 ad63581498d6cc94ce20d8f93a981c2a 364 Pfam PF01012 Electron transfer flavoprotein domain 29 207 4.9E-37 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Acife_1620 ad63581498d6cc94ce20d8f93a981c2a 364 PIRSF PIRSF000089 25 358 2.9E-111 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Acife_1620 ad63581498d6cc94ce20d8f93a981c2a 364 Gene3D G3DSA:3.40.50.620 25 228 5.8E-63 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_1620 ad63581498d6cc94ce20d8f93a981c2a 364 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 234 316 9.4E-36 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Acife_1620 ad63581498d6cc94ce20d8f93a981c2a 364 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 297 323 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 Acife_1620 ad63581498d6cc94ce20d8f93a981c2a 364 SUPERFAMILY SSF52467 234 352 3.05E-46 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Acife_0412 890ac9ec23a652239d463638b6047a7d 142 SUPERFAMILY SSF47413 1 69 9.57E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_0412 890ac9ec23a652239d463638b6047a7d 142 Pfam PF01381 Helix-turn-helix 8 62 2.5E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_0412 890ac9ec23a652239d463638b6047a7d 142 Gene3D G3DSA:1.10.260.40 1 132 2.5E-19 T 12-10-2018 Acife_0412 890ac9ec23a652239d463638b6047a7d 142 SMART SM00530 7 62 3.3E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_1133 5411db60d7a6a394d83f9ce5c35b7150 319 Pfam PF01936 NYN domain 8 163 2.5E-23 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type Acife_1133 5411db60d7a6a394d83f9ce5c35b7150 319 Gene3D G3DSA:2.40.50.140 187 278 1.4E-6 T 12-10-2018 Acife_1133 5411db60d7a6a394d83f9ce5c35b7150 319 Gene3D G3DSA:3.40.50.1010 2 166 2.6E-29 T 12-10-2018 Acife_0062 1a44f51f53856e96df045c6e20eef491 252 SMART SM00382 35 215 1.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0062 1a44f51f53856e96df045c6e20eef491 252 SUPERFAMILY SSF52540 7 220 1.08E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0062 1a44f51f53856e96df045c6e20eef491 252 Pfam PF00005 ABC transporter 27 165 9.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_0062 1a44f51f53856e96df045c6e20eef491 252 Gene3D G3DSA:3.40.50.300 4 248 1.3E-61 T 12-10-2018 Acife_2502 0ed6a24a22ccb6f558db0942f2ae864a 212 SUPERFAMILY SSF55681 8 200 3.15E-62 T 12-10-2018 Acife_2502 0ed6a24a22ccb6f558db0942f2ae864a 212 PIRSF PIRSF016262 1 208 2.7E-51 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Acife_2502 0ed6a24a22ccb6f558db0942f2ae864a 212 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 12-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Acife_2502 0ed6a24a22ccb6f558db0942f2ae864a 212 Gene3D G3DSA:3.30.930.10 4 204 1.1E-56 T 12-10-2018 Acife_2502 0ed6a24a22ccb6f558db0942f2ae864a 212 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 3.0E-13 T 12-10-2018 Acife_2502 0ed6a24a22ccb6f558db0942f2ae864a 212 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 159 4.7E-6 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Acife_2502 0ed6a24a22ccb6f558db0942f2ae864a 212 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 27 191 1.8E-52 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Acife_2502 0ed6a24a22ccb6f558db0942f2ae864a 212 Hamap MF_00013 Octanoyltransferase [lipB]. 4 206 33.971 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Acife_1454 c43e9063f8c294de78d9ee17f8c0e997 71 Gene3D G3DSA:3.30.160.250 1 71 1.7E-5 T 12-10-2018 Acife_1454 c43e9063f8c294de78d9ee17f8c0e997 71 SUPERFAMILY SSF143100 1 65 9.16E-11 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like Acife_0267 b8c8f83f006a34f2f4dd2b65c3418774 233 SUPERFAMILY SSF52266 33 231 1.55E-37 T 12-10-2018 Acife_0267 b8c8f83f006a34f2f4dd2b65c3418774 233 Gene3D G3DSA:3.40.50.1110 35 231 3.4E-35 T 12-10-2018 IPR036514 SGNH hydrolase superfamily Acife_0267 b8c8f83f006a34f2f4dd2b65c3418774 233 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 38 219 4.1E-25 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain Acife_2065 6b2bbc9c06909f10ead0197c3f5d0389 398 Gene3D G3DSA:2.40.50.100 61 92 3.9E-10 T 12-10-2018 Acife_2065 6b2bbc9c06909f10ead0197c3f5d0389 398 Gene3D G3DSA:2.40.30.170 234 353 9.0E-27 T 12-10-2018 Acife_2065 6b2bbc9c06909f10ead0197c3f5d0389 398 SUPERFAMILY SSF111369 58 183 3.01E-5 T 12-10-2018 Acife_2065 6b2bbc9c06909f10ead0197c3f5d0389 398 Gene3D G3DSA:1.10.287.470 93 187 3.9E-10 T 12-10-2018 Acife_2065 6b2bbc9c06909f10ead0197c3f5d0389 398 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 280 2.7E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_2065 6b2bbc9c06909f10ead0197c3f5d0389 398 Pfam PF00529 HlyD membrane-fusion protein of T1SS 39 339 4.6E-7 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Acife_2065 6b2bbc9c06909f10ead0197c3f5d0389 398 SUPERFAMILY SSF111369 179 266 5.1E-8 T 12-10-2018 Acife_0894 3d4ac256af05c319fefa1ef4d2ce0751 438 Pfam PF02321 Outer membrane efflux protein 259 431 4.3E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_0894 3d4ac256af05c319fefa1ef4d2ce0751 438 Pfam PF02321 Outer membrane efflux protein 50 232 2.1E-9 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_0894 3d4ac256af05c319fefa1ef4d2ce0751 438 Gene3D G3DSA:1.20.1600.10 39 436 2.9E-57 T 12-10-2018 Acife_0894 3d4ac256af05c319fefa1ef4d2ce0751 438 SUPERFAMILY SSF56954 29 434 8.63E-64 T 12-10-2018 Acife_0089 a61d7b4cd49647cd92eecdc0de4da6e2 195 Gene3D G3DSA:3.90.950.10 2 189 3.3E-60 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Acife_0089 a61d7b4cd49647cd92eecdc0de4da6e2 195 SUPERFAMILY SSF52972 2 181 1.24E-55 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Acife_0089 a61d7b4cd49647cd92eecdc0de4da6e2 195 PIRSF PIRSF006305 1 188 4.1E-46 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Acife_0089 a61d7b4cd49647cd92eecdc0de4da6e2 195 Hamap MF_00528 Septum formation protein Maf [maf]. 3 188 30.213 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Acife_0089 a61d7b4cd49647cd92eecdc0de4da6e2 195 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 181 3.6E-42 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Acife_0089 a61d7b4cd49647cd92eecdc0de4da6e2 195 Pfam PF02545 Maf-like protein 3 182 8.6E-50 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Acife_0266 bc4483f2827500a3a5c3c48a656a6a75 301 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 130 293 1.2E-62 T 12-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Acife_0266 bc4483f2827500a3a5c3c48a656a6a75 301 SMART SM00986 144 291 5.7E-41 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Acife_0266 bc4483f2827500a3a5c3c48a656a6a75 301 Gene3D G3DSA:3.40.470.10 118 301 4.5E-70 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Acife_0266 bc4483f2827500a3a5c3c48a656a6a75 301 SUPERFAMILY SSF52141 119 298 1.14E-61 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Acife_0266 bc4483f2827500a3a5c3c48a656a6a75 301 SMART SM00987 144 291 5.7E-41 T 12-10-2018 Acife_0266 bc4483f2827500a3a5c3c48a656a6a75 301 Pfam PF03167 Uracil DNA glycosylase superfamily 144 291 2.1E-44 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 SUPERFAMILY SSF53732 1 418 9.29E-147 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 ProSitePatterns PS00450 Aconitase family signature 1. 289 305 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 SUPERFAMILY SSF52016 438 640 5.3E-49 T 12-10-2018 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 ProSitePatterns PS01244 Aconitase family signature 2. 349 362 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 Gene3D G3DSA:3.30.499.20 4 267 3.8E-84 T 12-10-2018 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 Pfam PF00694 Aconitase C-terminal domain 521 575 9.4E-21 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 5 640 4.3E-272 T 12-10-2018 IPR006250 Aconitase, putative Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 Pfam PF00330 Aconitase family (aconitate hydratase) 7 407 8.8E-109 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 Gene3D G3DSA:3.20.19.10 464 645 3.8E-43 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 PRINTS PR00415 Aconitase family signature 90 98 3.0E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 PRINTS PR00415 Aconitase family signature 110 123 3.0E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 PRINTS PR00415 Aconitase family signature 186 199 3.0E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 PRINTS PR00415 Aconitase family signature 349 362 3.0E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 PRINTS PR00415 Aconitase family signature 200 213 3.0E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 PRINTS PR00415 Aconitase family signature 124 139 3.0E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_0626 4c64950a9a863e2751cd992eb1d56385 645 Gene3D G3DSA:3.30.499.10 270 415 2.7E-47 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Acife_2308 4441b1971df87f39613332957230b401 620 Gene3D G3DSA:3.40.50.300 286 518 1.6E-70 T 12-10-2018 Acife_2308 4441b1971df87f39613332957230b401 620 SMART SM00382 349 488 2.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2308 4441b1971df87f39613332957230b401 620 Pfam PF07724 AAA domain (Cdc48 subfamily) 349 510 1.2E-37 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_2308 4441b1971df87f39613332957230b401 620 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 353 371 5.3E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_2308 4441b1971df87f39613332957230b401 620 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 427 445 5.3E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_2308 4441b1971df87f39613332957230b401 620 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 398 416 5.3E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_2308 4441b1971df87f39613332957230b401 620 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 460 474 5.3E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_2308 4441b1971df87f39613332957230b401 620 SUPERFAMILY SSF52540 298 592 1.14E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 Gene3D G3DSA:2.40.180.10 4 485 2.0E-226 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 Pfam PF06628 Catalase-related immune-responsive 417 476 2.3E-20 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 PIRSF PIRSF038928 1 481 1.1E-220 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 Pfam PF00199 Catalase 8 389 2.0E-190 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 SMART SM01060 8 392 4.4E-281 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 SUPERFAMILY SSF56634 4 481 1.83E-214 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 PRINTS PR00067 Catalase signature 105 122 5.0E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 PRINTS PR00067 Catalase signature 321 347 5.0E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 PRINTS PR00067 Catalase signature 84 102 5.0E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 PRINTS PR00067 Catalase signature 289 316 5.0E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 PRINTS PR00067 Catalase signature 21 44 5.0E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_2431 34df2220b5a7fd46625a7d9cc2448a31 485 PRINTS PR00067 Catalase signature 124 142 5.0E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 SMART SM00963 65 146 1.2E-19 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 SMART SM00962 160 361 2.2E-105 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 SMART SM00382 159 339 2.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 334 347 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 SUPERFAMILY SSF52540 153 360 4.35E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 Gene3D G3DSA:1.20.120.140 62 359 4.8E-109 T 12-10-2018 Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 Gene3D G3DSA:3.40.50.300 160 349 4.8E-109 T 12-10-2018 Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 89 361 56.327 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 91 360 1.8E-100 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 Pfam PF00448 SRP54-type protein, GTPase domain 161 360 4.6E-73 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 SUPERFAMILY SSF47364 60 140 1.83E-17 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Acife_0556 155e9e256b8a5a44678c3365d85c1a70 365 Pfam PF02881 SRP54-type protein, helical bundle domain 85 142 1.9E-9 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 SUPERFAMILY SSF88659 209 304 5.05E-23 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 Pfam PF00140 Sigma-70 factor, region 1.2 40 73 1.0E-14 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 Gene3D G3DSA:1.10.10.10 151 225 3.0E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 102 115 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 1 312 36.849 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 74 300 6.4E-34 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 Gene3D G3DSA:1.20.120.1810 73 147 1.4E-40 T 12-10-2018 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 PRINTS PR00046 Major sigma-70 factor signature 271 286 3.8E-24 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 PRINTS PR00046 Major sigma-70 factor signature 286 297 3.8E-24 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 PRINTS PR00046 Major sigma-70 factor signature 250 262 3.8E-24 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 PRINTS PR00046 Major sigma-70 factor signature 126 134 3.8E-24 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 PRINTS PR00046 Major sigma-70 factor signature 102 115 3.8E-24 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 Gene3D G3DSA:1.20.120.1810 37 72 1.1E-6 T 12-10-2018 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 Pfam PF04542 Sigma-70 region 2 78 147 1.2E-20 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 Gene3D G3DSA:1.10.10.10 230 309 1.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 35 312 1.7E-118 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 SUPERFAMILY SSF88946 40 148 7.59E-47 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 SUPERFAMILY SSF88659 151 224 4.58E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 Pfam PF04545 Sigma-70, region 4 246 299 9.9E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 271 297 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_0862 f56891bee34413beb1a4e53f6fe4576d 313 Pfam PF04539 Sigma-70 region 3 158 227 2.3E-17 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Acife_1533 c3b75da6c7c913d34da4c44f4fc103f4 120 Pfam PF12840 Helix-turn-helix domain 11 71 1.5E-17 T 12-10-2018 Acife_1533 c3b75da6c7c913d34da4c44f4fc103f4 120 Gene3D G3DSA:1.10.10.10 1 95 5.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1533 c3b75da6c7c913d34da4c44f4fc103f4 120 SMART SM00418 10 91 4.5E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1533 c3b75da6c7c913d34da4c44f4fc103f4 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 5.7E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1533 c3b75da6c7c913d34da4c44f4fc103f4 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 5.7E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1533 c3b75da6c7c913d34da4c44f4fc103f4 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 5.7E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1533 c3b75da6c7c913d34da4c44f4fc103f4 120 SUPERFAMILY SSF46785 5 95 6.94E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0842 9770a28ec48eda2bb2d24cb872b06047 330 Pfam PF06144 DNA polymerase III, delta subunit 22 188 4.8E-21 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Acife_0842 9770a28ec48eda2bb2d24cb872b06047 330 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 329 7.3E-9 T 12-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_0842 9770a28ec48eda2bb2d24cb872b06047 330 SUPERFAMILY SSF48019 211 329 5.44E-25 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Acife_0842 9770a28ec48eda2bb2d24cb872b06047 330 SUPERFAMILY SSF52540 1 209 1.38E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0842 9770a28ec48eda2bb2d24cb872b06047 330 Gene3D G3DSA:1.20.272.10 214 330 3.5E-28 T 12-10-2018 Acife_0842 9770a28ec48eda2bb2d24cb872b06047 330 Gene3D G3DSA:3.40.50.300 1 137 6.6E-37 T 12-10-2018 Acife_0842 9770a28ec48eda2bb2d24cb872b06047 330 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 329 1.6E-72 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Acife_0842 9770a28ec48eda2bb2d24cb872b06047 330 Gene3D G3DSA:1.10.8.60 143 212 6.5E-19 T 12-10-2018 Acife_2056 f045425c06f8276a1ed24c54124857f3 176 Pfam PF09335 SNARE associated Golgi protein 43 165 1.2E-18 T 12-10-2018 IPR032816 SNARE associated Golgi protein Acife_1345 178b5a2e7c8cf5300bcb4d1c1c9c5359 423 Pfam PF07690 Major Facilitator Superfamily 249 418 7.4E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_1345 178b5a2e7c8cf5300bcb4d1c1c9c5359 423 Pfam PF07690 Major Facilitator Superfamily 30 208 6.7E-22 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_1345 178b5a2e7c8cf5300bcb4d1c1c9c5359 423 Gene3D G3DSA:1.20.1250.20 247 423 3.6E-26 T 12-10-2018 Acife_1345 178b5a2e7c8cf5300bcb4d1c1c9c5359 423 SUPERFAMILY SSF103473 11 422 8.24E-62 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_1345 178b5a2e7c8cf5300bcb4d1c1c9c5359 423 Gene3D G3DSA:1.20.1250.20 22 219 3.0E-24 T 12-10-2018 Acife_1345 178b5a2e7c8cf5300bcb4d1c1c9c5359 423 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Acife_2585 cd737db31f74d3761f1f536647e4c4c9 217 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 13 186 4.0E-28 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal Acife_2585 cd737db31f74d3761f1f536647e4c4c9 217 SMART SM01007 9 187 3.7E-30 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal Acife_2585 cd737db31f74d3761f1f536647e4c4c9 217 SUPERFAMILY SSF53639 6 213 2.55E-36 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Acife_2585 cd737db31f74d3761f1f536647e4c4c9 217 Gene3D G3DSA:3.40.225.10 1 216 1.4E-43 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Acife_2646 123eaaff6131185af009cd1fb4715991 692 SUPERFAMILY SSF54211 290 486 1.37E-50 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2646 123eaaff6131185af009cd1fb4715991 692 PIRSF PIRSF005499 1 692 3.3E-301 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Acife_2646 123eaaff6131185af009cd1fb4715991 692 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 691 31.37 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Acife_2646 123eaaff6131185af009cd1fb4715991 692 SUPERFAMILY SSF55666 448 545 1.28E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_2646 123eaaff6131185af009cd1fb4715991 692 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 318 1.2E-14 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Acife_2646 123eaaff6131185af009cd1fb4715991 692 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 689 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Acife_2646 123eaaff6131185af009cd1fb4715991 692 SUPERFAMILY SSF55666 144 235 3.79E-30 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_2646 123eaaff6131185af009cd1fb4715991 692 Gene3D G3DSA:3.30.1370.10 548 618 3.1E-19 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Acife_2646 123eaaff6131185af009cd1fb4715991 692 SUPERFAMILY SSF54211 2 143 1.01E-53 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2646 123eaaff6131185af009cd1fb4715991 692 Pfam PF01138 3' exoribonuclease family, domain 1 13 143 1.0E-22 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_2646 123eaaff6131185af009cd1fb4715991 692 Pfam PF01138 3' exoribonuclease family, domain 1 322 454 1.2E-24 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_2646 123eaaff6131185af009cd1fb4715991 692 SUPERFAMILY SSF50249 611 688 7.43E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_2646 123eaaff6131185af009cd1fb4715991 692 Gene3D G3DSA:3.30.230.70 1 229 7.5E-87 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_2646 123eaaff6131185af009cd1fb4715991 692 Gene3D G3DSA:2.40.50.140 619 692 7.8E-29 T 12-10-2018 Acife_2646 123eaaff6131185af009cd1fb4715991 692 Pfam PF00575 S1 RNA binding domain 617 688 6.9E-20 T 12-10-2018 IPR003029 S1 domain GO:0003676 Acife_2646 123eaaff6131185af009cd1fb4715991 692 Pfam PF00013 KH domain 554 611 6.5E-9 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Acife_2646 123eaaff6131185af009cd1fb4715991 692 SUPERFAMILY SSF54791 552 637 5.69E-23 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Acife_2646 123eaaff6131185af009cd1fb4715991 692 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 1.7E-15 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_2646 123eaaff6131185af009cd1fb4715991 692 Pfam PF03725 3' exoribonuclease family, domain 2 457 526 2.4E-7 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_2646 123eaaff6131185af009cd1fb4715991 692 SMART SM00322 550 614 1.6E-11 T 12-10-2018 IPR004087 K Homology domain GO:0003676 Acife_2646 123eaaff6131185af009cd1fb4715991 692 SMART SM00316 618 688 2.5E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_2646 123eaaff6131185af009cd1fb4715991 692 Gene3D G3DSA:3.30.230.70 233 547 2.6E-115 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 Gene3D G3DSA:1.10.1780.10 1 147 9.0E-36 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 7.8E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 SUPERFAMILY SSF81923 4 141 4.41E-44 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 142 6.9E-15 T 12-10-2018 IPR004176 Clp, N-terminal Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.5E-15 T 12-10-2018 IPR004176 Clp, N-terminal Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 713 727 8.0E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 680 698 8.0E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 606 624 8.0E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 669 8.0E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 860 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 Gene3D G3DSA:3.40.50.300 555 769 4.1E-88 T 12-10-2018 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 SMART SM01086 771 860 6.6E-33 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 636 654 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 Gene3D G3DSA:3.40.50.300 148 342 1.3E-72 T 12-10-2018 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 SUPERFAMILY SSF52540 551 858 2.01E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 771 851 7.7E-24 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 SUPERFAMILY SSF52540 159 550 1.58E-97 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 Gene3D G3DSA:1.10.8.60 771 863 2.0E-25 T 12-10-2018 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 Pfam PF07724 AAA domain (Cdc48 subfamily) 601 764 8.1E-56 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 SMART SM00382 602 768 2.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 SMART SM00382 198 343 1.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 Gene3D G3DSA:3.40.50.300 343 549 1.4E-68 T 12-10-2018 Acife_1705 6010c909688b5cbe45c4227eaedad9eb 866 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Acife_0203 5f0174429e74c7dbe855885556a8443b 247 Gene3D G3DSA:3.40.50.720 3 246 3.7E-68 T 12-10-2018 Acife_0203 5f0174429e74c7dbe855885556a8443b 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Acife_0203 5f0174429e74c7dbe855885556a8443b 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 1.0E-49 T 12-10-2018 Acife_0203 5f0174429e74c7dbe855885556a8443b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0203 5f0174429e74c7dbe855885556a8443b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 5.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0203 5f0174429e74c7dbe855885556a8443b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 5.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0203 5f0174429e74c7dbe855885556a8443b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 5.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0203 5f0174429e74c7dbe855885556a8443b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0203 5f0174429e74c7dbe855885556a8443b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0203 5f0174429e74c7dbe855885556a8443b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0203 5f0174429e74c7dbe855885556a8443b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0203 5f0174429e74c7dbe855885556a8443b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0203 5f0174429e74c7dbe855885556a8443b 247 SUPERFAMILY SSF51735 5 246 5.0E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0264 8661735a991622260a4ed3c889dfb508 623 SUPERFAMILY SSF52540 296 508 3.25E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0264 8661735a991622260a4ed3c889dfb508 623 SMART SM00382 28 215 1.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0264 8661735a991622260a4ed3c889dfb508 623 SMART SM00382 328 498 7.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0264 8661735a991622260a4ed3c889dfb508 623 SUPERFAMILY SSF52540 5 228 3.28E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0264 8661735a991622260a4ed3c889dfb508 623 Pfam PF00005 ABC transporter 320 453 7.3E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_0264 8661735a991622260a4ed3c889dfb508 623 Gene3D G3DSA:1.10.287.380 538 617 1.2E-15 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Acife_0264 8661735a991622260a4ed3c889dfb508 623 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_0264 8661735a991622260a4ed3c889dfb508 623 Pfam PF00005 ABC transporter 19 169 7.2E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_0264 8661735a991622260a4ed3c889dfb508 623 Pfam PF12848 ABC transporter 208 281 2.6E-7 T 12-10-2018 IPR032781 ABC-transporter extension domain Acife_0264 8661735a991622260a4ed3c889dfb508 623 Gene3D G3DSA:3.40.50.300 8 263 1.2E-56 T 12-10-2018 Acife_0264 8661735a991622260a4ed3c889dfb508 623 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_0264 8661735a991622260a4ed3c889dfb508 623 Pfam PF16326 ABC transporter C-terminal domain 546 613 1.0E-15 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Acife_0264 8661735a991622260a4ed3c889dfb508 623 Gene3D G3DSA:3.40.50.300 265 527 6.5E-65 T 12-10-2018 Acife_2701 f1ac85e4ccdaa4fcdb65a8b1941afeba 91 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 8 78 1.8E-38 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2701 f1ac85e4ccdaa4fcdb65a8b1941afeba 91 SUPERFAMILY SSF50249 8 83 1.95E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_2701 f1ac85e4ccdaa4fcdb65a8b1941afeba 91 Pfam PF00366 Ribosomal protein S17 12 78 1.5E-35 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2701 f1ac85e4ccdaa4fcdb65a8b1941afeba 91 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 9.3E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2701 f1ac85e4ccdaa4fcdb65a8b1941afeba 91 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 9.3E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2701 f1ac85e4ccdaa4fcdb65a8b1941afeba 91 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 9.3E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2701 f1ac85e4ccdaa4fcdb65a8b1941afeba 91 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 78 2.0E-23 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2701 f1ac85e4ccdaa4fcdb65a8b1941afeba 91 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2701 f1ac85e4ccdaa4fcdb65a8b1941afeba 91 Gene3D G3DSA:2.40.50.140 4 86 6.9E-38 T 12-10-2018 Acife_2701 f1ac85e4ccdaa4fcdb65a8b1941afeba 91 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 25.251 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1483 4e10aaecb76ed44f29467ba0e1d6ffa4 155 Pfam PF07080 Protein of unknown function (DUF1348) 8 137 7.4E-62 T 12-10-2018 IPR009783 Protein of unknown function DUF1348 Acife_1483 4e10aaecb76ed44f29467ba0e1d6ffa4 155 Gene3D G3DSA:3.10.450.50 11 155 1.0E-71 T 12-10-2018 Acife_1483 4e10aaecb76ed44f29467ba0e1d6ffa4 155 SUPERFAMILY SSF54427 4 155 8.56E-73 T 12-10-2018 IPR032710 NTF2-like domain superfamily Acife_2847 85891f24ea3fb74f85583562e2aa927a 87 Gene3D G3DSA:1.10.1200.10 8 85 1.8E-12 T 12-10-2018 IPR036736 ACP-like superfamily Acife_2847 85891f24ea3fb74f85583562e2aa927a 87 Pfam PF00550 Phosphopantetheine attachment site 16 80 7.9E-7 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain Acife_2847 85891f24ea3fb74f85583562e2aa927a 87 SUPERFAMILY SSF47336 11 86 1.15E-9 T 12-10-2018 IPR036736 ACP-like superfamily Acife_1256 6931d9dcce0557931c3b2a77006f62c2 187 SUPERFAMILY SSF100950 1 185 3.35E-50 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Acife_1256 6931d9dcce0557931c3b2a77006f62c2 187 Gene3D G3DSA:3.40.50.10420 1 186 5.1E-50 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Acife_1256 6931d9dcce0557931c3b2a77006f62c2 187 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 179 3.3E-37 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Acife_1256 6931d9dcce0557931c3b2a77006f62c2 187 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 1 179 9.3E-46 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Acife_1256 6931d9dcce0557931c3b2a77006f62c2 187 PIRSF PIRSF006806 1 182 2.0E-33 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Acife_2301 4dde16541a6387f3b0ac7e55c6971b2e 107 Gene3D G3DSA:1.10.10.10 1 66 1.9E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2301 4dde16541a6387f3b0ac7e55c6971b2e 107 Pfam PF01527 Transposase 1 86 1.3E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Acife_2301 4dde16541a6387f3b0ac7e55c6971b2e 107 SUPERFAMILY SSF46689 3 98 6.99E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 Gene3D G3DSA:3.90.980.10 111 233 3.3E-36 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 SUPERFAMILY SSF56731 111 414 4.58E-99 T 12-10-2018 Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 SMART SM00493 252 323 2.8E-18 T 12-10-2018 IPR006171 TOPRIM domain Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 Gene3D G3DSA:3.90.580.10 2 100 2.6E-36 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 Gene3D G3DSA:3.40.1360.10 234 360 5.2E-42 T 12-10-2018 Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 SUPERFAMILY SSF57783 1 98 7.14E-34 T 12-10-2018 Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 Pfam PF13155 Toprim-like 256 341 4.7E-14 T 12-10-2018 Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 Pfam PF10410 DnaB-helicase binding domain of primase 362 414 1.5E-9 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 Hamap MF_00974 DNA primase [dnaG]. 3 573 26.835 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 Pfam PF01807 CHC2 zinc finger 6 98 2.0E-36 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 TIGRFAM TIGR01391 dnaG: DNA primase 5 410 4.1E-135 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 Pfam PF08275 DNA primase catalytic core, N-terminal domain 130 245 3.7E-38 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 PIRSF PIRSF002811 1 537 1.2E-137 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Acife_2383 0f0780c654db305e753b31f2d5dfd2a9 580 SMART SM00400 35 89 9.7E-33 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Acife_1551 057df867159db091edde689a272056ca 393 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1551 057df867159db091edde689a272056ca 393 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 40 1.6E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_0489 ab95ee894685f9396eb53cd0c9b5e0d1 153 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.5E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0489 ab95ee894685f9396eb53cd0c9b5e0d1 153 SUPERFAMILY SSF46955 1 127 1.39E-33 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Acife_0489 ab95ee894685f9396eb53cd0c9b5e0d1 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.2E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0489 ab95ee894685f9396eb53cd0c9b5e0d1 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.2E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0489 ab95ee894685f9396eb53cd0c9b5e0d1 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.2E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0489 ab95ee894685f9396eb53cd0c9b5e0d1 153 SMART SM00422 1 70 1.0E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0489 ab95ee894685f9396eb53cd0c9b5e0d1 153 Gene3D G3DSA:1.10.1660.10 1 125 1.3E-31 T 12-10-2018 Acife_0489 ab95ee894685f9396eb53cd0c9b5e0d1 153 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 2.5E-45 T 12-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 129 5.7E-50 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 SMART SM01097 1 131 1.3E-83 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 Pfam PF00117 Glutamine amidotransferase class-I 193 369 1.7E-41 T 12-10-2018 IPR017926 Glutamine amidotransferase Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 SUPERFAMILY SSF52021 2 139 9.29E-54 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 278 295 6.8E-36 T 12-10-2018 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 303 314 6.8E-36 T 12-10-2018 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 261 277 6.8E-36 T 12-10-2018 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 191 205 6.8E-36 T 12-10-2018 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 230 244 6.8E-36 T 12-10-2018 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 SUPERFAMILY SSF52317 181 373 2.82E-56 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 Gene3D G3DSA:3.50.30.20 1 149 2.3E-56 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 375 46.9 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 372 9.9E-138 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 Gene3D G3DSA:3.40.50.880 150 374 1.5E-66 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 261 272 2.4E-9 T 12-10-2018 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 233 242 2.4E-9 T 12-10-2018 Acife_1025 19594662ea466941f89b8ff81e6a8f0b 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 346 359 2.4E-9 T 12-10-2018 Acife_0657 7c75ba89e59b6c0ed6b65f57d67a1b88 128 Pfam PF11533 Protein of unknown function (DUF3225) 5 125 3.6E-55 T 12-10-2018 IPR024507 Protein of unknown function DUF3225 Acife_0657 7c75ba89e59b6c0ed6b65f57d67a1b88 128 Gene3D G3DSA:3.10.450.50 1 125 2.0E-47 T 12-10-2018 Acife_0657 7c75ba89e59b6c0ed6b65f57d67a1b88 128 SUPERFAMILY SSF54427 5 125 4.01E-35 T 12-10-2018 IPR032710 NTF2-like domain superfamily Acife_3278 9ccac69d979b48181d68759225c4d385 241 Gene3D G3DSA:3.20.20.70 16 225 1.2E-33 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_3278 9ccac69d979b48181d68759225c4d385 241 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 19 206 2.6E-55 T 12-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein Acife_3278 9ccac69d979b48181d68759225c4d385 241 Pfam PF13353 4Fe-4S single cluster domain 31 123 3.8E-8 T 12-10-2018 Acife_3278 9ccac69d979b48181d68759225c4d385 241 Pfam PF04055 Radical SAM superfamily 38 176 9.3E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_3278 9ccac69d979b48181d68759225c4d385 241 SUPERFAMILY SSF102114 29 214 4.71E-23 T 12-10-2018 Acife_0905 b3440b37a69983310c8ee77c86a04d81 465 SUPERFAMILY SSF46689 371 459 2.82E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_0905 b3440b37a69983310c8ee77c86a04d81 465 Gene3D G3DSA:3.40.50.300 146 328 9.5E-66 T 12-10-2018 Acife_0905 b3440b37a69983310c8ee77c86a04d81 465 Pfam PF02954 Bacterial regulatory protein, Fis family 418 456 2.0E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_0905 b3440b37a69983310c8ee77c86a04d81 465 SMART SM00382 178 322 2.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0905 b3440b37a69983310c8ee77c86a04d81 465 Pfam PF00158 Sigma-54 interaction domain 158 324 6.3E-72 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Acife_0905 b3440b37a69983310c8ee77c86a04d81 465 SUPERFAMILY SSF52540 157 399 6.73E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0905 b3440b37a69983310c8ee77c86a04d81 465 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 371 380 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Acife_0905 b3440b37a69983310c8ee77c86a04d81 465 Gene3D G3DSA:1.10.10.60 410 462 3.1E-10 T 12-10-2018 Acife_0905 b3440b37a69983310c8ee77c86a04d81 465 Gene3D G3DSA:1.10.8.60 329 407 1.5E-22 T 12-10-2018 Acife_0541 5acd176b9025ef2130dbefafe7e1e72e 391 Pfam PF00437 Type II/IV secretion system protein 162 312 1.1E-26 T 12-10-2018 IPR001482 Type II/IV secretion system protein Acife_0541 5acd176b9025ef2130dbefafe7e1e72e 391 Gene3D G3DSA:3.40.50.300 149 388 1.1E-60 T 12-10-2018 Acife_0541 5acd176b9025ef2130dbefafe7e1e72e 391 SUPERFAMILY SSF52540 119 336 1.8E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0541 5acd176b9025ef2130dbefafe7e1e72e 391 SMART SM00382 169 312 0.0046 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0451 f23b519c323f7259ef119ec88ad0cffa 75 Gene3D G3DSA:3.40.5.90 40 75 3.9E-12 T 12-10-2018 Acife_0451 f23b519c323f7259ef119ec88ad0cffa 75 Gene3D G3DSA:3.40.5.90 1 39 2.6E-11 T 12-10-2018 Acife_0451 f23b519c323f7259ef119ec88ad0cffa 75 Pfam PF09360 Iron-binding zinc finger CDGSH type 49 70 4.2E-10 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Acife_0451 f23b519c323f7259ef119ec88ad0cffa 75 Pfam PF09360 Iron-binding zinc finger CDGSH type 15 33 9.5E-9 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Acife_0451 f23b519c323f7259ef119ec88ad0cffa 75 SMART SM00704 3 39 0.0034 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Acife_0451 f23b519c323f7259ef119ec88ad0cffa 75 SMART SM00704 40 75 1.2E-7 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Acife_1696 08b60ad19ac64d957e2f552ca915c845 124 SUPERFAMILY SSF52833 2 105 3.79E-32 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1696 08b60ad19ac64d957e2f552ca915c845 124 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 1.7E-29 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Acife_1696 08b60ad19ac64d957e2f552ca915c845 124 PIRSF PIRSF000077 1 104 4.0E-27 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Acife_1696 08b60ad19ac64d957e2f552ca915c845 124 PRINTS PR00421 Thioredoxin family signature 21 29 1.2E-7 T 12-10-2018 Acife_1696 08b60ad19ac64d957e2f552ca915c845 124 PRINTS PR00421 Thioredoxin family signature 68 79 1.2E-7 T 12-10-2018 Acife_1696 08b60ad19ac64d957e2f552ca915c845 124 PRINTS PR00421 Thioredoxin family signature 29 38 1.2E-7 T 12-10-2018 Acife_1696 08b60ad19ac64d957e2f552ca915c845 124 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Acife_1696 08b60ad19ac64d957e2f552ca915c845 124 Gene3D G3DSA:3.40.30.10 1 114 8.2E-31 T 12-10-2018 Acife_1696 08b60ad19ac64d957e2f552ca915c845 124 Pfam PF00085 Thioredoxin 3 102 1.6E-26 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 Acife_2757 58bc993b4519231a3f087c89035707e1 377 Pfam PF02222 ATP-grasp domain 112 281 1.2E-51 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Acife_2757 58bc993b4519231a3f087c89035707e1 377 SUPERFAMILY SSF56059 103 301 2.83E-56 T 12-10-2018 Acife_2757 58bc993b4519231a3f087c89035707e1 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 7 359 40.885 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Acife_2757 58bc993b4519231a3f087c89035707e1 377 SUPERFAMILY SSF51246 305 369 7.85E-16 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Acife_2757 58bc993b4519231a3f087c89035707e1 377 Gene3D G3DSA:3.40.50.20 1 107 7.0E-40 T 12-10-2018 Acife_2757 58bc993b4519231a3f087c89035707e1 377 SUPERFAMILY SSF52440 4 100 3.17E-26 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Acife_2757 58bc993b4519231a3f087c89035707e1 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 7 359 2.1E-117 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Acife_2757 58bc993b4519231a3f087c89035707e1 377 Gene3D G3DSA:3.30.470.20 178 373 4.3E-72 T 12-10-2018 Acife_2757 58bc993b4519231a3f087c89035707e1 377 Gene3D G3DSA:3.30.1490.20 108 177 4.4E-23 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Acife_0982 92841ea11c802e19e4512433a183b65d 451 Pfam PF01938 TRAM domain 379 440 2.9E-9 T 12-10-2018 IPR002792 TRAM domain Acife_0982 92841ea11c802e19e4512433a183b65d 451 SMART SM00729 147 367 1.8E-58 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Acife_0982 92841ea11c802e19e4512433a183b65d 451 Pfam PF04055 Radical SAM superfamily 151 325 2.9E-32 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_0982 92841ea11c802e19e4512433a183b65d 451 Pfam PF00919 Uncharacterized protein family UPF0004 4 103 9.2E-27 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Acife_0982 92841ea11c802e19e4512433a183b65d 451 Gene3D G3DSA:3.80.30.20 145 375 1.5E-83 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Acife_0982 92841ea11c802e19e4512433a183b65d 451 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Acife_0982 92841ea11c802e19e4512433a183b65d 451 SUPERFAMILY SSF102114 124 371 4.32E-58 T 12-10-2018 Acife_0982 92841ea11c802e19e4512433a183b65d 451 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 2.6E-140 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Acife_0982 92841ea11c802e19e4512433a183b65d 451 Gene3D G3DSA:3.40.50.12160 3 137 7.1E-31 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Acife_0982 92841ea11c802e19e4512433a183b65d 451 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 440 72.499 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Acife_0982 92841ea11c802e19e4512433a183b65d 451 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 3.5E-161 T 12-10-2018 Acife_1419 f882d5f51ac75d7844c9047e4190f0e0 192 SUPERFAMILY SSF52972 4 186 3.01E-53 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Acife_1419 f882d5f51ac75d7844c9047e4190f0e0 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 3.9E-53 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Acife_1419 f882d5f51ac75d7844c9047e4190f0e0 192 Gene3D G3DSA:3.90.950.10 4 191 7.2E-58 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Acife_1419 f882d5f51ac75d7844c9047e4190f0e0 192 Pfam PF02545 Maf-like protein 6 186 1.1E-43 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Acife_1419 f882d5f51ac75d7844c9047e4190f0e0 192 PIRSF PIRSF006305 2 191 1.7E-43 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Acife_1419 f882d5f51ac75d7844c9047e4190f0e0 192 Hamap MF_00528 Septum formation protein Maf [maf]. 5 191 29.291 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Acife_1686 fc4bd04333765c6088f3c3e20a6f41e4 567 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 3 553 49.648 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_1686 fc4bd04333765c6088f3c3e20a6f41e4 567 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_1686 fc4bd04333765c6088f3c3e20a6f41e4 567 Gene3D G3DSA:3.20.20.70 9 376 5.4E-150 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1686 fc4bd04333765c6088f3c3e20a6f41e4 567 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 550 3.0E-18 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_1686 fc4bd04333765c6088f3c3e20a6f41e4 567 SMART SM00917 422 552 1.4E-14 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_1686 fc4bd04333765c6088f3c3e20a6f41e4 567 SUPERFAMILY SSF51569 20 328 7.47E-99 T 12-10-2018 Acife_1686 fc4bd04333765c6088f3c3e20a6f41e4 567 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_1686 fc4bd04333765c6088f3c3e20a6f41e4 567 SUPERFAMILY SSF89000 388 437 1.69E-12 T 12-10-2018 Acife_1686 fc4bd04333765c6088f3c3e20a6f41e4 567 Gene3D G3DSA:3.30.160.270 377 551 2.1E-41 T 12-10-2018 Acife_1686 fc4bd04333765c6088f3c3e20a6f41e4 567 SUPERFAMILY SSF110921 446 550 1.57E-19 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Acife_1686 fc4bd04333765c6088f3c3e20a6f41e4 567 Pfam PF00682 HMGL-like 32 307 1.2E-71 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Acife_2203 ca004b948f7259abd311d589e1d306a7 358 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 3 348 5.7E-150 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Acife_2203 ca004b948f7259abd311d589e1d306a7 358 SMART SM01329 3 350 1.2E-194 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Acife_2203 ca004b948f7259abd311d589e1d306a7 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 350 1.6E-133 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Acife_2203 ca004b948f7259abd311d589e1d306a7 358 Gene3D G3DSA:3.40.718.10 1 358 5.7E-158 T 12-10-2018 Acife_2203 ca004b948f7259abd311d589e1d306a7 358 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 2 354 50.703 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Acife_2203 ca004b948f7259abd311d589e1d306a7 358 SUPERFAMILY SSF53659 2 355 5.76E-122 T 12-10-2018 Acife_2203 ca004b948f7259abd311d589e1d306a7 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 Gene3D G3DSA:1.10.150.240 26 95 2.9E-56 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 195 1.8E-29 T 12-10-2018 Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 193 1.7E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 Gene3D G3DSA:3.40.50.1000 14 217 2.9E-56 T 12-10-2018 IPR023214 HAD superfamily Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 190 1.3E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 11 226 33.645 T 12-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 14 225 8.6E-67 T 12-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 SUPERFAMILY SSF56784 11 225 9.05E-56 T 12-10-2018 IPR036412 HAD-like superfamily Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 109 122 3.3E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 3.3E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 3.3E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_0182 0ff33125e61bc48b1337d7cf1a7e5549 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 185 198 3.3E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_1787 8a912223ccecca2d71a82421d54f5799 127 SUPERFAMILY SSF51230 4 126 2.45E-36 T 12-10-2018 IPR011053 Single hybrid motif Acife_1787 8a912223ccecca2d71a82421d54f5799 127 Pfam PF01597 Glycine cleavage H-protein 8 125 8.0E-40 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Acife_1787 8a912223ccecca2d71a82421d54f5799 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 35.886 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Acife_1787 8a912223ccecca2d71a82421d54f5799 127 Gene3D G3DSA:2.40.50.100 2 127 1.8E-43 T 12-10-2018 Acife_1787 8a912223ccecca2d71a82421d54f5799 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Acife_1787 8a912223ccecca2d71a82421d54f5799 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 126 7.6E-45 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Acife_2741 4bfac22a6fef15fccb1ca074485c2a61 261 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.344 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Acife_2741 4bfac22a6fef15fccb1ca074485c2a61 261 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Acife_2741 4bfac22a6fef15fccb1ca074485c2a61 261 Gene3D G3DSA:3.40.50.150 40 260 1.2E-76 T 12-10-2018 Acife_2741 4bfac22a6fef15fccb1ca074485c2a61 261 SUPERFAMILY SSF53335 17 236 3.87E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2741 4bfac22a6fef15fccb1ca074485c2a61 261 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 257 2.5E-82 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Acife_2741 4bfac22a6fef15fccb1ca074485c2a61 261 Pfam PF01209 ubiE/COQ5 methyltransferase family 29 258 2.8E-91 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 ProSitePatterns PS00079 Multicopper oxidases signature 1. 166 186 - T 12-10-2018 IPR033138 Multicopper oxidases, conserved site Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 PRINTS PR00158 Rusticyanin signature 72 89 1.3E-75 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 PRINTS PR00158 Rusticyanin signature 112 131 1.3E-75 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 PRINTS PR00158 Rusticyanin signature 91 110 1.3E-75 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 PRINTS PR00158 Rusticyanin signature 50 70 1.3E-75 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 PRINTS PR00158 Rusticyanin signature 138 156 1.3E-75 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 PRINTS PR00158 Rusticyanin signature 159 181 1.3E-75 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 TIGRFAM TIGR03095 rusti_cyanin: rusticyanin 48 189 4.6E-70 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 SUPERFAMILY SSF49503 39 188 5.75E-24 T 12-10-2018 IPR008972 Cupredoxin Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 98 189 3.9E-6 T 12-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 165 182 - T 12-10-2018 IPR028871 Blue (type 1) copper protein, binding site Acife_1718 9e2de0db440bb6d6283e886ef98734f0 189 Gene3D G3DSA:2.60.40.420 36 189 3.2E-54 T 12-10-2018 IPR008972 Cupredoxin Acife_2894 f35e9a708fda072f6b7f0b2b7746382f 369 Gene3D G3DSA:1.10.340.30 19 130 1.1E-77 T 12-10-2018 Acife_2894 f35e9a708fda072f6b7f0b2b7746382f 369 SUPERFAMILY SSF48150 4 220 5.81E-66 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Acife_2894 f35e9a708fda072f6b7f0b2b7746382f 369 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 163 2.0E-15 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Acife_2894 f35e9a708fda072f6b7f0b2b7746382f 369 SUPERFAMILY SSF55811 217 364 4.88E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Acife_2894 f35e9a708fda072f6b7f0b2b7746382f 369 SMART SM00478 37 187 3.9E-35 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Acife_2894 f35e9a708fda072f6b7f0b2b7746382f 369 Gene3D G3DSA:1.10.1670.10 7 208 1.1E-77 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Acife_2894 f35e9a708fda072f6b7f0b2b7746382f 369 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 263 1.1E-97 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 Acife_2894 f35e9a708fda072f6b7f0b2b7746382f 369 Pfam PF14815 NUDIX domain 233 363 7.8E-22 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Acife_2894 f35e9a708fda072f6b7f0b2b7746382f 369 Gene3D G3DSA:3.90.79.10 230 367 2.2E-16 T 12-10-2018 Acife_2503 4438ea311875e204a4efeaa30cde28e7 317 Hamap MF_00206 Lipoyl synthase [lipA]. 1 317 146.866 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Acife_2503 4438ea311875e204a4efeaa30cde28e7 317 SUPERFAMILY SSF102114 47 310 2.49E-62 T 12-10-2018 Acife_2503 4438ea311875e204a4efeaa30cde28e7 317 TIGRFAM TIGR00510 lipA: lipoyl synthase 26 314 1.2E-128 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Acife_2503 4438ea311875e204a4efeaa30cde28e7 317 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 28 69 9.4E-7 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Acife_2503 4438ea311875e204a4efeaa30cde28e7 317 SMART SM00729 80 288 1.4E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Acife_2503 4438ea311875e204a4efeaa30cde28e7 317 Gene3D G3DSA:3.20.20.70 79 313 9.7E-15 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2503 4438ea311875e204a4efeaa30cde28e7 317 Pfam PF04055 Radical SAM superfamily 87 247 1.4E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_2503 4438ea311875e204a4efeaa30cde28e7 317 PIRSF PIRSF005963 2 317 1.1E-128 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Acife_2169 ddd0aed726a6b9f44b7fdced0bd9a4c4 352 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Acife_2169 ddd0aed726a6b9f44b7fdced0bd9a4c4 352 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 350 50.222 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Acife_2169 ddd0aed726a6b9f44b7fdced0bd9a4c4 352 SUPERFAMILY SSF51726 4 350 2.62E-118 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Acife_2169 ddd0aed726a6b9f44b7fdced0bd9a4c4 352 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 348 2.6E-132 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Acife_2169 ddd0aed726a6b9f44b7fdced0bd9a4c4 352 Gene3D G3DSA:3.20.20.210 1 350 1.3E-153 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Acife_2169 ddd0aed726a6b9f44b7fdced0bd9a4c4 352 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Acife_2169 ddd0aed726a6b9f44b7fdced0bd9a4c4 352 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 349 1.5E-137 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Acife_3271 ea77521e5943fd23ba99b14d4d6d765c 247 Gene3D G3DSA:1.10.760.10 153 246 4.7E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_3271 ea77521e5943fd23ba99b14d4d6d765c 247 PIRSF PIRSF000005 20 247 9.6E-58 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Acife_3271 ea77521e5943fd23ba99b14d4d6d765c 247 SUPERFAMILY SSF46626 75 148 1.08E-16 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_3271 ea77521e5943fd23ba99b14d4d6d765c 247 Gene3D G3DSA:1.10.760.10 70 148 4.1E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_3271 ea77521e5943fd23ba99b14d4d6d765c 247 Pfam PF00034 Cytochrome c 73 148 2.1E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_3271 ea77521e5943fd23ba99b14d4d6d765c 247 Pfam PF00034 Cytochrome c 160 247 6.3E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_3271 ea77521e5943fd23ba99b14d4d6d765c 247 SUPERFAMILY SSF46626 155 246 1.72E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_2206 e71832f0672226261c844c3d6d4831fc 164 SUPERFAMILY SSF52540 1 160 6.08E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2206 e71832f0672226261c844c3d6d4831fc 164 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 4 134 1.2E-40 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Acife_2206 e71832f0672226261c844c3d6d4831fc 164 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 4 159 6.0E-36 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Acife_2206 e71832f0672226261c844c3d6d4831fc 164 Gene3D G3DSA:2.20.25.120 47 77 2.2E-47 T 12-10-2018 Acife_2206 e71832f0672226261c844c3d6d4831fc 164 Gene3D G3DSA:3.40.50.300 5 156 2.2E-47 T 12-10-2018 Acife_0479 f34c354e22235c5c07a56464bee9fa99 200 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 15 185 1.8E-53 T 12-10-2018 IPR012912 Plasmid pRiA4b, Orf3 Acife_0479 f34c354e22235c5c07a56464bee9fa99 200 SUPERFAMILY SSF159941 14 188 5.62E-50 T 12-10-2018 IPR024047 MM3350-like superfamily Acife_0479 f34c354e22235c5c07a56464bee9fa99 200 Gene3D G3DSA:3.10.290.30 8 188 5.3E-51 T 12-10-2018 IPR024047 MM3350-like superfamily Acife_2087 8f7a5335e7f9a7d5de0bfd2f4219cc9c 445 Pfam PF13091 PLD-like domain 288 412 2.1E-27 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Acife_2087 8f7a5335e7f9a7d5de0bfd2f4219cc9c 445 Pfam PF13091 PLD-like domain 104 242 2.2E-14 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Acife_2087 8f7a5335e7f9a7d5de0bfd2f4219cc9c 445 Gene3D G3DSA:3.30.870.10 84 268 2.7E-39 T 12-10-2018 Acife_2087 8f7a5335e7f9a7d5de0bfd2f4219cc9c 445 Gene3D G3DSA:3.30.870.10 276 417 4.5E-25 T 12-10-2018 Acife_2087 8f7a5335e7f9a7d5de0bfd2f4219cc9c 445 SUPERFAMILY SSF56024 83 274 1.39E-42 T 12-10-2018 Acife_2087 8f7a5335e7f9a7d5de0bfd2f4219cc9c 445 SMART SM00155 358 385 0.0035 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Acife_2087 8f7a5335e7f9a7d5de0bfd2f4219cc9c 445 SMART SM00155 179 206 0.062 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Acife_2087 8f7a5335e7f9a7d5de0bfd2f4219cc9c 445 SUPERFAMILY SSF56024 252 430 2.92E-38 T 12-10-2018 Acife_0843 f941c2d3da6afbc06356559dd2055f96 172 Gene3D G3DSA:3.30.160.150 21 171 1.9E-16 T 12-10-2018 Acife_0843 f941c2d3da6afbc06356559dd2055f96 172 Pfam PF04390 Lipopolysaccharide-assembly 49 160 5.2E-6 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Acife_0156 a86e3c92a93f8e8e5571e833df51bfd2 451 SUPERFAMILY SSF116878 126 451 3.66E-43 T 12-10-2018 Acife_0156 a86e3c92a93f8e8e5571e833df51bfd2 451 Gene3D G3DSA:3.40.50.300 222 379 7.8E-100 T 12-10-2018 Acife_0156 a86e3c92a93f8e8e5571e833df51bfd2 451 Pfam PF12631 MnmE helical domain 128 448 2.0E-49 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Acife_0156 a86e3c92a93f8e8e5571e833df51bfd2 451 SUPERFAMILY SSF52540 77 371 3.29E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0156 a86e3c92a93f8e8e5571e833df51bfd2 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 125 1.8E-35 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Acife_0156 a86e3c92a93f8e8e5571e833df51bfd2 451 Gene3D G3DSA:3.30.1360.120 2 126 1.0E-40 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Acife_0156 a86e3c92a93f8e8e5571e833df51bfd2 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 222 341 6.4E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_0156 a86e3c92a93f8e8e5571e833df51bfd2 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 13 451 7.2E-95 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Acife_0156 a86e3c92a93f8e8e5571e833df51bfd2 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 451 31.035 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Acife_0156 a86e3c92a93f8e8e5571e833df51bfd2 451 Pfam PF01926 50S ribosome-binding GTPase 223 335 1.6E-22 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_0156 a86e3c92a93f8e8e5571e833df51bfd2 451 Gene3D G3DSA:1.20.120.430 127 451 7.8E-100 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Acife_1297 78145682c95fea4c5aeebb4445dd8f01 292 SUPERFAMILY SSF54713 146 290 4.97E-45 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Acife_1297 78145682c95fea4c5aeebb4445dd8f01 292 SUPERFAMILY SSF46934 1 55 1.11E-16 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 Acife_1297 78145682c95fea4c5aeebb4445dd8f01 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Acife_1297 78145682c95fea4c5aeebb4445dd8f01 292 SUPERFAMILY SSF54713 55 142 5.63E-20 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Acife_1297 78145682c95fea4c5aeebb4445dd8f01 292 Pfam PF00889 Elongation factor TS 72 271 2.2E-64 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Acife_1297 78145682c95fea4c5aeebb4445dd8f01 292 Gene3D G3DSA:3.30.479.20 56 144 7.7E-26 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Acife_1297 78145682c95fea4c5aeebb4445dd8f01 292 Gene3D G3DSA:3.30.479.20 151 270 2.0E-37 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Acife_1297 78145682c95fea4c5aeebb4445dd8f01 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 290 2.3E-100 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Acife_1297 78145682c95fea4c5aeebb4445dd8f01 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 71.871 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Acife_1297 78145682c95fea4c5aeebb4445dd8f01 292 Gene3D G3DSA:1.10.8.10 1 55 2.7E-24 T 12-10-2018 Acife_1297 78145682c95fea4c5aeebb4445dd8f01 292 Gene3D G3DSA:1.10.286.20 189 235 2.0E-37 T 12-10-2018 Acife_0363 9976e59b9859c9e07a2c0f674e7007c8 229 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 26 153 2.8E-6 T 12-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system Acife_0133 c7d763fc28321c4609a151695bf7910e 267 Gene3D G3DSA:1.25.40.10 143 265 5.2E-30 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0133 c7d763fc28321c4609a151695bf7910e 267 SUPERFAMILY SSF48452 144 260 1.52E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0133 c7d763fc28321c4609a151695bf7910e 267 Pfam PF14559 Tetratricopeptide repeat 211 260 2.6E-6 T 12-10-2018 Acife_0133 c7d763fc28321c4609a151695bf7910e 267 SMART SM00028 180 213 20.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0133 c7d763fc28321c4609a151695bf7910e 267 SMART SM00028 217 250 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0133 c7d763fc28321c4609a151695bf7910e 267 Pfam PF13432 Tetratricopeptide repeat 149 209 3.2E-7 T 12-10-2018 Acife_0133 c7d763fc28321c4609a151695bf7910e 267 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 260 4.6E-37 T 12-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal Acife_0133 c7d763fc28321c4609a151695bf7910e 267 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 3 263 17.135 T 12-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 Acife_1806 4146fbbd6dd519c8b4f070723d387868 788 Pfam PF04851 Type III restriction enzyme, res subunit 61 107 8.2E-6 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Acife_1806 4146fbbd6dd519c8b4f070723d387868 788 Gene3D G3DSA:3.40.50.300 124 325 4.9E-20 T 12-10-2018 Acife_1806 4146fbbd6dd519c8b4f070723d387868 788 SUPERFAMILY SSF52540 74 297 2.62E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0226 ebe6ec28069b07cb8524ca65856a83d3 200 Pfam PF03358 NADPH-dependent FMN reductase 3 143 1.1E-16 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Acife_0226 ebe6ec28069b07cb8524ca65856a83d3 200 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 200 47.183 T 12-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Acife_0226 ebe6ec28069b07cb8524ca65856a83d3 200 SUPERFAMILY SSF52218 1 198 9.44E-64 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Acife_0226 ebe6ec28069b07cb8524ca65856a83d3 200 Gene3D G3DSA:3.40.50.360 1 199 5.9E-78 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Acife_0226 ebe6ec28069b07cb8524ca65856a83d3 200 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 198 9.6E-94 T 12-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Acife_1574 42056c7a69329ea536728e3d07066ff1 119 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 26 102 2.0E-31 T 12-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 Acife_1574 42056c7a69329ea536728e3d07066ff1 119 SMART SM00530 33 88 5.6E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_1574 42056c7a69329ea536728e3d07066ff1 119 Gene3D G3DSA:1.10.260.40 20 118 1.5E-30 T 12-10-2018 Acife_1574 42056c7a69329ea536728e3d07066ff1 119 Pfam PF01381 Helix-turn-helix 35 84 2.6E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_1574 42056c7a69329ea536728e3d07066ff1 119 SUPERFAMILY SSF47413 28 111 1.76E-25 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_1013 c3565df05e157f29a8c546028a66741b 466 SUPERFAMILY SSF52317 7 237 4.59E-45 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_1013 c3565df05e157f29a8c546028a66741b 466 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 250 464 31.603 T 12-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Acife_1013 c3565df05e157f29a8c546028a66741b 466 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 253 461 2.6E-63 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Acife_1013 c3565df05e157f29a8c546028a66741b 466 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 297 460 4.2E-53 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Acife_1013 c3565df05e157f29a8c546028a66741b 466 Gene3D G3DSA:3.30.70.260 372 443 8.4E-72 T 12-10-2018 Acife_1013 c3565df05e157f29a8c546028a66741b 466 SUPERFAMILY SSF100950 249 393 4.79E-41 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Acife_1013 c3565df05e157f29a8c546028a66741b 466 Pfam PF17124 ThiJ/PfpI family-like 27 154 7.7E-11 T 12-10-2018 IPR032633 ThiJ/PfpI family-like Acife_1013 c3565df05e157f29a8c546028a66741b 466 Gene3D G3DSA:3.40.50.1360 254 454 8.4E-72 T 12-10-2018 Acife_1013 c3565df05e157f29a8c546028a66741b 466 Gene3D G3DSA:3.40.50.880 1 240 9.8E-59 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_1013 c3565df05e157f29a8c546028a66741b 466 SUPERFAMILY SSF75445 374 445 1.26E-21 T 12-10-2018 Acife_1609 e3e5619c8ddb9ec37c370b01a65e1dec 161 Gene3D G3DSA:1.10.10.10 10 91 3.5E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1609 e3e5619c8ddb9ec37c370b01a65e1dec 161 Pfam PF01475 Ferric uptake regulator family 27 119 1.0E-8 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Acife_1609 e3e5619c8ddb9ec37c370b01a65e1dec 161 SUPERFAMILY SSF46785 18 148 5.14E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2081 fbb3a2028deb86ba4aabeddbeb71143d 118 Gene3D G3DSA:3.40.50.1400 4 118 8.9E-23 T 12-10-2018 Acife_2081 fbb3a2028deb86ba4aabeddbeb71143d 118 SUPERFAMILY SSF53800 6 115 1.44E-22 T 12-10-2018 Acife_2081 fbb3a2028deb86ba4aabeddbeb71143d 118 Pfam PF01903 CbiX 10 113 1.6E-20 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Acife_2387 730c9dcca60464996154721921266db5 285 Pfam PF04545 Sigma-70, region 4 224 276 1.5E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Acife_2387 730c9dcca60464996154721921266db5 285 PRINTS PR00046 Major sigma-70 factor signature 85 98 8.2E-21 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2387 730c9dcca60464996154721921266db5 285 PRINTS PR00046 Major sigma-70 factor signature 109 117 8.2E-21 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2387 730c9dcca60464996154721921266db5 285 PRINTS PR00046 Major sigma-70 factor signature 248 263 8.2E-21 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2387 730c9dcca60464996154721921266db5 285 PRINTS PR00046 Major sigma-70 factor signature 227 239 8.2E-21 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2387 730c9dcca60464996154721921266db5 285 PRINTS PR00046 Major sigma-70 factor signature 263 274 8.2E-21 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2387 730c9dcca60464996154721921266db5 285 Gene3D G3DSA:1.10.10.10 206 281 2.4E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2387 730c9dcca60464996154721921266db5 285 Gene3D G3DSA:1.20.120.1810 26 129 9.1E-30 T 12-10-2018 Acife_2387 730c9dcca60464996154721921266db5 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 57 278 7.8E-32 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Acife_2387 730c9dcca60464996154721921266db5 285 Pfam PF04542 Sigma-70 region 2 61 127 1.7E-19 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Acife_2387 730c9dcca60464996154721921266db5 285 SUPERFAMILY SSF88946 34 127 5.89E-32 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Acife_2387 730c9dcca60464996154721921266db5 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 85 98 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2387 730c9dcca60464996154721921266db5 285 SUPERFAMILY SSF88659 196 280 6.17E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Acife_1714 87e6add1d6a2782ac576ae0f229599ec 206 Pfam PF13098 Thioredoxin-like domain 61 201 4.7E-18 T 12-10-2018 IPR012336 Thioredoxin-like fold Acife_1714 87e6add1d6a2782ac576ae0f229599ec 206 Gene3D G3DSA:3.40.30.10 56 204 2.2E-29 T 12-10-2018 Acife_1714 87e6add1d6a2782ac576ae0f229599ec 206 SUPERFAMILY SSF52833 53 201 3.12E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1772 f0335b7ea6a62d917f2fd2c89068d69f 257 Pfam PF01026 TatD related DNase 3 252 2.3E-76 T 12-10-2018 IPR001130 TatD family GO:0016788 Acife_1772 f0335b7ea6a62d917f2fd2c89068d69f 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Acife_1772 f0335b7ea6a62d917f2fd2c89068d69f 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 5.4E-81 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Acife_1772 f0335b7ea6a62d917f2fd2c89068d69f 257 PIRSF PIRSF005902 1 256 2.9E-74 T 12-10-2018 IPR001130 TatD family GO:0016788 Acife_1772 f0335b7ea6a62d917f2fd2c89068d69f 257 SUPERFAMILY SSF51556 2 252 3.18E-83 T 12-10-2018 IPR032466 Metal-dependent hydrolase Acife_1772 f0335b7ea6a62d917f2fd2c89068d69f 257 Gene3D G3DSA:3.20.20.140 1 256 8.5E-88 T 12-10-2018 Acife_1772 f0335b7ea6a62d917f2fd2c89068d69f 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 27 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 SUPERFAMILY SSF52374 12 294 1.8E-100 T 12-10-2018 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 10 324 1.9E-80 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 SUPERFAMILY SSF48163 319 470 9.55E-24 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 Gene3D G3DSA:3.40.50.620 2 333 2.6E-119 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 11 469 2.7E-120 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 209 1.6E-20 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 215 223 1.6E-20 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 38 1.6E-20 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 13 25 1.6E-20 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 55 1.6E-20 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 Gene3D G3DSA:1.10.10.350 402 474 4.8E-15 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Acife_1090 185f5d9afc2e2d8590467908eeb28f70 474 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 9 471 28.147 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Acife_0467 2d694ce8faa6736e163ca97627f18b7f 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 43 1.6E-8 T 12-10-2018 Acife_0467 2d694ce8faa6736e163ca97627f18b7f 80 SUPERFAMILY SSF143120 1 45 9.16E-10 T 12-10-2018 IPR036165 YefM-like superfamily Acife_0467 2d694ce8faa6736e163ca97627f18b7f 80 Gene3D G3DSA:3.40.1620.10 1 40 4.7E-10 T 12-10-2018 Acife_0467 2d694ce8faa6736e163ca97627f18b7f 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 42 1.3E-11 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Acife_2703 dde7938e1ab42a069bb215a31c4d0dcb 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.1E-60 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2703 dde7938e1ab42a069bb215a31c4d0dcb 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.2E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2703 dde7938e1ab42a069bb215a31c4d0dcb 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.2E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2703 dde7938e1ab42a069bb215a31c4d0dcb 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.2E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2703 dde7938e1ab42a069bb215a31c4d0dcb 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.2E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2703 dde7938e1ab42a069bb215a31c4d0dcb 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 3.7E-49 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Acife_2703 dde7938e1ab42a069bb215a31c4d0dcb 138 Gene3D G3DSA:3.90.1170.10 1 137 2.6E-56 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Acife_2703 dde7938e1ab42a069bb215a31c4d0dcb 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.497 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2703 dde7938e1ab42a069bb215a31c4d0dcb 138 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2703 dde7938e1ab42a069bb215a31c4d0dcb 138 SUPERFAMILY SSF54686 1 135 1.03E-55 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Acife_2703 dde7938e1ab42a069bb215a31c4d0dcb 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2616 d08bd42627f873af721f1567313d0505 476 SMART SM00155 389 416 0.78 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Acife_2616 d08bd42627f873af721f1567313d0505 476 SMART SM00155 211 238 1.0 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Acife_2616 d08bd42627f873af721f1567313d0505 476 PIRSF PIRSF000850 366 452 0.078 T 12-10-2018 Acife_2616 d08bd42627f873af721f1567313d0505 476 PIRSF PIRSF000850 301 372 0.34 T 12-10-2018 Acife_2616 d08bd42627f873af721f1567313d0505 476 PIRSF PIRSF000850 103 193 1.2 T 12-10-2018 Acife_2616 d08bd42627f873af721f1567313d0505 476 Gene3D G3DSA:3.30.870.10 108 300 2.6E-38 T 12-10-2018 Acife_2616 d08bd42627f873af721f1567313d0505 476 SUPERFAMILY SSF56024 109 308 1.67E-44 T 12-10-2018 Acife_2616 d08bd42627f873af721f1567313d0505 476 Gene3D G3DSA:3.30.870.10 306 445 7.9E-22 T 12-10-2018 Acife_2616 d08bd42627f873af721f1567313d0505 476 Pfam PF13091 PLD-like domain 319 442 2.0E-23 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Acife_2616 d08bd42627f873af721f1567313d0505 476 Pfam PF13091 PLD-like domain 128 271 1.6E-17 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Acife_2616 d08bd42627f873af721f1567313d0505 476 Pfam PF13396 Phospholipase_D-nuclease N-terminal 13 52 7.1E-7 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal Acife_2616 d08bd42627f873af721f1567313d0505 476 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 3 476 3.2E-88 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 Acife_2616 d08bd42627f873af721f1567313d0505 476 SUPERFAMILY SSF56024 289 461 6.06E-33 T 12-10-2018 Acife_3254 ea1bce987982985ac571db32a7874284 458 Gene3D G3DSA:1.20.1250.20 24 453 1.5E-87 T 12-10-2018 Acife_3254 ea1bce987982985ac571db32a7874284 458 PRINTS PR00171 Sugar transporter signature 33 43 1.5E-5 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Acife_3254 ea1bce987982985ac571db32a7874284 458 PRINTS PR00171 Sugar transporter signature 116 135 1.5E-5 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Acife_3254 ea1bce987982985ac571db32a7874284 458 PRINTS PR00171 Sugar transporter signature 376 388 1.5E-5 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Acife_3254 ea1bce987982985ac571db32a7874284 458 SUPERFAMILY SSF103473 15 449 1.26E-72 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_3254 ea1bce987982985ac571db32a7874284 458 Pfam PF00083 Sugar (and other) transporter 28 451 9.3E-61 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Acife_3254 ea1bce987982985ac571db32a7874284 458 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 Gene3D G3DSA:1.20.120.640 310 462 8.1E-44 T 12-10-2018 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 SUPERFAMILY SSF52374 8 316 2.95E-96 T 12-10-2018 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 7 461 1.6E-163 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 2.3E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 66 75 2.3E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 2.3E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 30 41 2.3E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 Pfam PF09190 DALR domain 346 407 1.2E-20 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 Gene3D G3DSA:3.40.50.620 2 309 4.3E-128 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 21 317 1.8E-128 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 7 462 38.174 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 SMART SM00840 346 407 5.7E-25 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Acife_1091 f377ed869212911d3353e1fb17e3f61e 462 SUPERFAMILY SSF47323 320 460 2.09E-37 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_2914 9710e6c8a8014dbe0cb462493b171c7e 477 SUPERFAMILY SSF109998 71 246 7.26E-39 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Acife_2914 9710e6c8a8014dbe0cb462493b171c7e 477 Gene3D G3DSA:3.10.50.40 223 428 3.0E-54 T 12-10-2018 Acife_2914 9710e6c8a8014dbe0cb462493b171c7e 477 SUPERFAMILY SSF54534 326 421 2.75E-21 T 12-10-2018 Acife_2914 9710e6c8a8014dbe0cb462493b171c7e 477 Pfam PF09312 SurA N-terminal domain 71 188 4.8E-32 T 12-10-2018 IPR015391 SurA N-terminal Acife_2914 9710e6c8a8014dbe0cb462493b171c7e 477 Pfam PF00639 PPIC-type PPIASE domain 342 415 8.3E-16 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Acife_2914 9710e6c8a8014dbe0cb462493b171c7e 477 Pfam PF00639 PPIC-type PPIASE domain 224 315 5.9E-15 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Acife_2914 9710e6c8a8014dbe0cb462493b171c7e 477 Hamap MF_01183 Chaperone SurA [surA]. 12 470 26.114 T 12-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 Acife_2914 9710e6c8a8014dbe0cb462493b171c7e 477 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 363 384 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Acife_2914 9710e6c8a8014dbe0cb462493b171c7e 477 Gene3D G3DSA:1.10.4030.30 68 222 1.3E-41 T 12-10-2018 Acife_2914 9710e6c8a8014dbe0cb462493b171c7e 477 SUPERFAMILY SSF54534 221 321 4.97E-23 T 12-10-2018 Acife_2914 9710e6c8a8014dbe0cb462493b171c7e 477 Gene3D G3DSA:3.10.50.40 326 427 3.0E-54 T 12-10-2018 Acife_2608 8d1da831eadcd62b5b6f5f54303e03b2 94 SMART SM00411 3 92 5.6E-27 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2608 8d1da831eadcd62b5b6f5f54303e03b2 94 Gene3D G3DSA:4.10.520.10 1 94 9.1E-29 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_2608 8d1da831eadcd62b5b6f5f54303e03b2 94 Pfam PF00216 Bacterial DNA-binding protein 3 90 3.9E-25 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2608 8d1da831eadcd62b5b6f5f54303e03b2 94 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.8E-13 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2608 8d1da831eadcd62b5b6f5f54303e03b2 94 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.8E-13 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2608 8d1da831eadcd62b5b6f5f54303e03b2 94 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.8E-13 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2608 8d1da831eadcd62b5b6f5f54303e03b2 94 SUPERFAMILY SSF47729 3 91 1.47E-24 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_2608 8d1da831eadcd62b5b6f5f54303e03b2 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Acife_1471 5321c93b0181556e139580caacb22852 236 SMART SM00421 173 230 1.3E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Acife_1471 5321c93b0181556e139580caacb22852 236 Gene3D G3DSA:1.10.10.10 169 236 4.3E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1471 5321c93b0181556e139580caacb22852 236 Pfam PF03472 Autoinducer binding domain 18 159 4.9E-38 T 12-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain Acife_1471 5321c93b0181556e139580caacb22852 236 SUPERFAMILY SSF46894 162 235 7.48E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Acife_1471 5321c93b0181556e139580caacb22852 236 Pfam PF00196 Bacterial regulatory proteins, luxR family 175 229 1.6E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Acife_1471 5321c93b0181556e139580caacb22852 236 ProSitePatterns PS00622 LuxR-type HTH domain signature. 190 217 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Acife_1471 5321c93b0181556e139580caacb22852 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 3.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Acife_1471 5321c93b0181556e139580caacb22852 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 3.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Acife_1471 5321c93b0181556e139580caacb22852 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 3.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Acife_1471 5321c93b0181556e139580caacb22852 236 SUPERFAMILY SSF75516 4 166 2.09E-39 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Acife_1471 5321c93b0181556e139580caacb22852 236 Gene3D G3DSA:3.30.450.80 1 168 3.8E-50 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Acife_0811 4551e3587d619c428b84213d5faa4986 478 Gene3D G3DSA:2.40.50.100 208 257 1.8E-28 T 12-10-2018 Acife_0811 4551e3587d619c428b84213d5faa4986 478 Gene3D G3DSA:2.40.50.100 135 183 7.0E-8 T 12-10-2018 Acife_0811 4551e3587d619c428b84213d5faa4986 478 Gene3D G3DSA:1.10.287.470 194 207 1.8E-28 T 12-10-2018 Acife_0811 4551e3587d619c428b84213d5faa4986 478 Gene3D G3DSA:2.40.30.170 258 331 1.8E-28 T 12-10-2018 Acife_0811 4551e3587d619c428b84213d5faa4986 478 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 118 330 1.0E-78 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_0811 4551e3587d619c428b84213d5faa4986 478 SUPERFAMILY SSF111369 133 334 7.98E-21 T 12-10-2018 Acife_0811 4551e3587d619c428b84213d5faa4986 478 Gene3D G3DSA:2.40.420.20 334 423 3.0E-19 T 12-10-2018 Acife_0811 4551e3587d619c428b84213d5faa4986 478 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 213 400 8.4E-36 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Acife_0035 68ec9c9177a530fadae5088615474469 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 5 311 3.2E-122 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Acife_0035 68ec9c9177a530fadae5088615474469 337 Pfam PF00814 Glycoprotease family 26 305 1.1E-91 T 12-10-2018 IPR000905 Gcp-like domain Acife_0035 68ec9c9177a530fadae5088615474469 337 Gene3D G3DSA:3.30.420.40 5 313 3.0E-116 T 12-10-2018 Acife_0035 68ec9c9177a530fadae5088615474469 337 SUPERFAMILY SSF53067 102 307 2.78E-38 T 12-10-2018 Acife_0035 68ec9c9177a530fadae5088615474469 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 2.7E-51 T 12-10-2018 IPR017861 Kae1/TsaD family Acife_0035 68ec9c9177a530fadae5088615474469 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 2.7E-51 T 12-10-2018 IPR017861 Kae1/TsaD family Acife_0035 68ec9c9177a530fadae5088615474469 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 2.7E-51 T 12-10-2018 IPR017861 Kae1/TsaD family Acife_0035 68ec9c9177a530fadae5088615474469 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 6 19 2.7E-51 T 12-10-2018 IPR017861 Kae1/TsaD family Acife_0035 68ec9c9177a530fadae5088615474469 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 2.7E-51 T 12-10-2018 IPR017861 Kae1/TsaD family Acife_0035 68ec9c9177a530fadae5088615474469 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 2.7E-51 T 12-10-2018 IPR017861 Kae1/TsaD family Acife_0035 68ec9c9177a530fadae5088615474469 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 12-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 Acife_0035 68ec9c9177a530fadae5088615474469 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 3 330 61.05 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Acife_0035 68ec9c9177a530fadae5088615474469 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 6 305 7.5E-105 T 12-10-2018 IPR017861 Kae1/TsaD family Acife_0035 68ec9c9177a530fadae5088615474469 337 SUPERFAMILY SSF53067 5 121 1.81E-27 T 12-10-2018 Acife_0035 68ec9c9177a530fadae5088615474469 337 Gene3D G3DSA:3.30.420.40 128 292 3.0E-116 T 12-10-2018 Acife_0097 d4c2bd3ca059f0064a0a4e10dde0c26e 141 SUPERFAMILY SSF51316 18 139 4.19E-52 T 12-10-2018 IPR011057 Mss4-like superfamily Acife_0097 d4c2bd3ca059f0064a0a4e10dde0c26e 141 Pfam PF01641 SelR domain 21 138 2.6E-46 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Acife_0097 d4c2bd3ca059f0064a0a4e10dde0c26e 141 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 13 140 35.289 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Acife_0097 d4c2bd3ca059f0064a0a4e10dde0c26e 141 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 18 138 8.8E-48 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Acife_0097 d4c2bd3ca059f0064a0a4e10dde0c26e 141 Gene3D G3DSA:2.170.150.20 14 141 1.3E-54 T 12-10-2018 Acife_0973 cb12a36fc2ed2f655772540731697013 290 Gene3D G3DSA:3.40.50.300 1 288 9.1E-115 T 12-10-2018 Acife_0973 cb12a36fc2ed2f655772540731697013 290 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.7E-71 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Acife_0973 cb12a36fc2ed2f655772540731697013 290 PRINTS PR00478 Phosphoribulokinase family signature 126 144 8.3E-33 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Acife_0973 cb12a36fc2ed2f655772540731697013 290 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.3E-33 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Acife_0973 cb12a36fc2ed2f655772540731697013 290 PRINTS PR00478 Phosphoribulokinase family signature 164 181 8.3E-33 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Acife_0973 cb12a36fc2ed2f655772540731697013 290 PRINTS PR00478 Phosphoribulokinase family signature 182 205 8.3E-33 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Acife_0973 cb12a36fc2ed2f655772540731697013 290 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Acife_0973 cb12a36fc2ed2f655772540731697013 290 SUPERFAMILY SSF52540 3 285 1.57E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1318 4ea894fe4192d1767b1434480358c407 254 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 152 197 2.4E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_1318 4ea894fe4192d1767b1434480358c407 254 Gene3D G3DSA:3.40.50.1000 5 215 7.0E-68 T 12-10-2018 IPR023214 HAD superfamily Acife_1318 4ea894fe4192d1767b1434480358c407 254 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 196 1.9E-21 T 12-10-2018 Acife_1318 4ea894fe4192d1767b1434480358c407 254 Gene3D G3DSA:1.10.150.240 17 95 7.0E-68 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Acife_1318 4ea894fe4192d1767b1434480358c407 254 SUPERFAMILY SSF56784 1 220 4.0E-41 T 12-10-2018 IPR036412 HAD-like superfamily Acife_1318 4ea894fe4192d1767b1434480358c407 254 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 8.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_1318 4ea894fe4192d1767b1434480358c407 254 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 8.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_1318 4ea894fe4192d1767b1434480358c407 254 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 8.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_2481 80e4510313bcd26c07d4d6c6cf4113d2 312 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 296 3.4E-33 T 12-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 Acife_2276 318b1431cc48a792c98965af3cab1351 954 Gene3D G3DSA:1.20.120.330 294 447 1.0E-48 T 12-10-2018 Acife_2276 318b1431cc48a792c98965af3cab1351 954 SUPERFAMILY SSF81301 31 295 1.54E-69 T 12-10-2018 Acife_2276 318b1431cc48a792c98965af3cab1351 954 SUPERFAMILY SSF81593 296 443 2.98E-38 T 12-10-2018 Acife_2276 318b1431cc48a792c98965af3cab1351 954 Pfam PF08335 GlnD PII-uridylyltransferase 827 913 1.3E-8 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Acife_2276 318b1431cc48a792c98965af3cab1351 954 Pfam PF08335 GlnD PII-uridylyltransferase 318 441 5.2E-37 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Acife_2276 318b1431cc48a792c98965af3cab1351 954 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 49 951 16.942 T 12-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 Acife_2276 318b1431cc48a792c98965af3cab1351 954 SUPERFAMILY SSF81593 817 949 4.0E-24 T 12-10-2018 Acife_2276 318b1431cc48a792c98965af3cab1351 954 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 569 805 5.0E-73 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Acife_2276 318b1431cc48a792c98965af3cab1351 954 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 86 285 2.1E-61 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Acife_2276 318b1431cc48a792c98965af3cab1351 954 SUPERFAMILY SSF81301 534 815 8.83E-75 T 12-10-2018 Acife_2276 318b1431cc48a792c98965af3cab1351 954 Gene3D G3DSA:1.20.120.330 813 951 1.7E-27 T 12-10-2018 Acife_2276 318b1431cc48a792c98965af3cab1351 954 Gene3D G3DSA:1.20.120.1510 456 570 1.4E-14 T 12-10-2018 Acife_2276 318b1431cc48a792c98965af3cab1351 954 Gene3D G3DSA:3.30.460.100 571 812 1.1E-80 T 12-10-2018 Acife_2276 318b1431cc48a792c98965af3cab1351 954 Gene3D G3DSA:3.30.460.100 58 289 2.4E-64 T 12-10-2018 Acife_0099 f3d14ea27ca3b735740660310c91d393 512 SUPERFAMILY SSF74650 35 402 2.29E-121 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Acife_0099 f3d14ea27ca3b735740660310c91d393 512 Gene3D G3DSA:2.70.98.10 34 406 3.1E-131 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Acife_0099 f3d14ea27ca3b735740660310c91d393 512 PIRSF PIRSF006281 3 510 1.9E-150 T 12-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD Acife_0099 f3d14ea27ca3b735740660310c91d393 512 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 35 505 1.7E-151 T 12-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 Acife_0099 f3d14ea27ca3b735740660310c91d393 512 SUPERFAMILY SSF81296 408 506 6.58E-14 T 12-10-2018 IPR014756 Immunoglobulin E-set Acife_0099 f3d14ea27ca3b735740660310c91d393 512 Gene3D G3DSA:2.60.40.10 414 511 1.1E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold Acife_3252 11f5bf55536f93aca7ebd8ad27ecffd6 182 Gene3D G3DSA:2.60.120.10 1 182 2.1E-70 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_3252 11f5bf55536f93aca7ebd8ad27ecffd6 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 176 2.1E-79 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Acife_3252 11f5bf55536f93aca7ebd8ad27ecffd6 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 155 3.0E-66 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Acife_3252 11f5bf55536f93aca7ebd8ad27ecffd6 182 SUPERFAMILY SSF51182 1 178 1.19E-75 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Acife_3252 11f5bf55536f93aca7ebd8ad27ecffd6 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 8.9E-72 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Acife_1857 5525c01366e5db44a7d7684d338b97c7 417 Pfam PF00512 His Kinase A (phospho-acceptor) domain 199 255 1.4E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_1857 5525c01366e5db44a7d7684d338b97c7 417 SMART SM00387 306 410 2.0E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1857 5525c01366e5db44a7d7684d338b97c7 417 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 409 3.0E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1857 5525c01366e5db44a7d7684d338b97c7 417 Gene3D G3DSA:1.10.287.130 183 259 5.9E-10 T 12-10-2018 Acife_1857 5525c01366e5db44a7d7684d338b97c7 417 SUPERFAMILY SSF47384 198 255 1.86E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_1857 5525c01366e5db44a7d7684d338b97c7 417 SUPERFAMILY SSF55874 270 409 5.37E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1857 5525c01366e5db44a7d7684d338b97c7 417 Gene3D G3DSA:3.30.565.10 268 412 4.8E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1857 5525c01366e5db44a7d7684d338b97c7 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 355 2.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1857 5525c01366e5db44a7d7684d338b97c7 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 407 2.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1857 5525c01366e5db44a7d7684d338b97c7 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 388 2.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_0774 58ad0a6321d03e6327facd7062fb8366 155 Gene3D G3DSA:1.10.1660.10 1 136 1.1E-25 T 12-10-2018 Acife_0774 58ad0a6321d03e6327facd7062fb8366 155 Pfam PF13411 MerR HTH family regulatory protein 2 65 2.1E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0774 58ad0a6321d03e6327facd7062fb8366 155 SMART SM00422 1 69 7.4E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0774 58ad0a6321d03e6327facd7062fb8366 155 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0774 58ad0a6321d03e6327facd7062fb8366 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 6.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0774 58ad0a6321d03e6327facd7062fb8366 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0774 58ad0a6321d03e6327facd7062fb8366 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0774 58ad0a6321d03e6327facd7062fb8366 155 SUPERFAMILY SSF46955 2 104 3.8E-21 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Acife_0972 d4e997e09650d6a14778aab30632788a 272 Gene3D G3DSA:3.20.20.220 1 272 5.0E-98 T 12-10-2018 Acife_0972 d4e997e09650d6a14778aab30632788a 272 SUPERFAMILY SSF51730 3 271 8.04E-92 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like Acife_0972 d4e997e09650d6a14778aab30632788a 272 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 270 2.0E-96 T 12-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 Acife_0972 d4e997e09650d6a14778aab30632788a 272 Pfam PF02219 Methylenetetrahydrofolate reductase 3 270 6.7E-86 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Acife_1088 466e08a54a8f69de70bb8fa2d5412556 904 SMART SM00052 528 772 1.5E-64 T 12-10-2018 IPR001633 EAL domain Acife_1088 466e08a54a8f69de70bb8fa2d5412556 904 Gene3D G3DSA:3.30.70.270 347 514 4.8E-53 T 12-10-2018 Acife_1088 466e08a54a8f69de70bb8fa2d5412556 904 Pfam PF00563 EAL domain 534 767 4.5E-56 T 12-10-2018 IPR001633 EAL domain Acife_1088 466e08a54a8f69de70bb8fa2d5412556 904 Gene3D G3DSA:3.20.20.450 531 782 2.0E-69 T 12-10-2018 IPR035919 EAL domain superfamily Acife_1088 466e08a54a8f69de70bb8fa2d5412556 904 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 506 1.2E-40 T 12-10-2018 IPR000160 GGDEF domain Acife_1088 466e08a54a8f69de70bb8fa2d5412556 904 SMART SM00267 342 514 9.7E-56 T 12-10-2018 IPR000160 GGDEF domain Acife_1088 466e08a54a8f69de70bb8fa2d5412556 904 SUPERFAMILY SSF141868 534 779 2.22E-61 T 12-10-2018 IPR035919 EAL domain superfamily Acife_1088 466e08a54a8f69de70bb8fa2d5412556 904 Gene3D G3DSA:3.30.450.20 43 197 5.1E-10 T 12-10-2018 Acife_1088 466e08a54a8f69de70bb8fa2d5412556 904 SUPERFAMILY SSF55073 358 508 2.28E-45 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_1088 466e08a54a8f69de70bb8fa2d5412556 904 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 506 4.6E-45 T 12-10-2018 IPR000160 GGDEF domain Acife_2168 3344cbfe4552633df16a39df637f38e2 465 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 4.5E-37 T 12-10-2018 Acife_2168 3344cbfe4552633df16a39df637f38e2 465 PRINTS PR00419 Adrenodoxin reductase family signature 321 334 4.5E-37 T 12-10-2018 Acife_2168 3344cbfe4552633df16a39df637f38e2 465 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 4.5E-37 T 12-10-2018 Acife_2168 3344cbfe4552633df16a39df637f38e2 465 PRINTS PR00419 Adrenodoxin reductase family signature 287 301 4.5E-37 T 12-10-2018 Acife_2168 3344cbfe4552633df16a39df637f38e2 465 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 4.5E-37 T 12-10-2018 Acife_2168 3344cbfe4552633df16a39df637f38e2 465 SUPERFAMILY SSF51971 143 398 6.47E-69 T 12-10-2018 Acife_2168 3344cbfe4552633df16a39df637f38e2 465 Gene3D G3DSA:1.10.1060.10 8 143 7.9E-35 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Acife_2168 3344cbfe4552633df16a39df637f38e2 465 Gene3D G3DSA:3.40.50.720 144 253 6.2E-20 T 12-10-2018 Acife_2168 3344cbfe4552633df16a39df637f38e2 465 SUPERFAMILY SSF46548 5 155 1.15E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Acife_2168 3344cbfe4552633df16a39df637f38e2 465 Gene3D G3DSA:3.50.50.60 254 397 1.2E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2168 3344cbfe4552633df16a39df637f38e2 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 452 4.0E-28 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_2168 3344cbfe4552633df16a39df637f38e2 465 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 131 2.8E-38 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Acife_2168 3344cbfe4552633df16a39df637f38e2 465 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 4 465 9.3E-250 T 12-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 Acife_2865 1b0da5f1e640214664f881a1f6db9aa9 337 ProSitePatterns PS00534 Ferrochelatase signature. 190 208 - T 12-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Acife_2865 1b0da5f1e640214664f881a1f6db9aa9 337 Gene3D G3DSA:3.40.50.1400 2 321 2.2E-97 T 12-10-2018 Acife_2865 1b0da5f1e640214664f881a1f6db9aa9 337 Hamap MF_00323 Ferrochelatase [hemH]. 1 321 35.118 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Acife_2865 1b0da5f1e640214664f881a1f6db9aa9 337 TIGRFAM TIGR00109 hemH: ferrochelatase 2 316 7.0E-90 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Acife_2865 1b0da5f1e640214664f881a1f6db9aa9 337 SUPERFAMILY SSF53800 2 325 4.45E-105 T 12-10-2018 Acife_2865 1b0da5f1e640214664f881a1f6db9aa9 337 Gene3D G3DSA:3.40.50.1400 164 302 2.2E-97 T 12-10-2018 Acife_2865 1b0da5f1e640214664f881a1f6db9aa9 337 Pfam PF00762 Ferrochelatase 2 318 4.0E-110 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 Pfam PF00970 Oxidoreductase FAD-binding domain 106 197 9.3E-14 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 Gene3D G3DSA:3.10.20.30 1 99 1.4E-26 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 SUPERFAMILY SSF52343 201 332 2.23E-40 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 SUPERFAMILY SSF54292 1 89 1.06E-27 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 2.4E-22 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 2.4E-22 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 298 306 2.4E-22 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 2.4E-22 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 2.4E-22 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 2.4E-22 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 8.3E-16 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 Gene3D G3DSA:3.40.50.80 200 333 2.8E-36 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 Pfam PF00175 Oxidoreductase NAD-binding domain 209 308 4.3E-24 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 SUPERFAMILY SSF63380 102 198 4.66E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 208 227 3.2E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 245 256 3.2E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 298 306 3.2E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 132 142 3.2E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2776 5520dd378d8c4c5f21df599872cf604a 338 Gene3D G3DSA:2.40.30.10 101 199 3.6E-24 T 12-10-2018 Acife_2535 72fef3e8f57fbb3ae32f6d3cca50238e 340 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 339 1.8E-101 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Acife_2535 72fef3e8f57fbb3ae32f6d3cca50238e 340 SUPERFAMILY SSF46589 15 100 2.09E-20 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Acife_2535 72fef3e8f57fbb3ae32f6d3cca50238e 340 Gene3D G3DSA:3.30.930.10 9 340 6.0E-118 T 12-10-2018 Acife_2535 72fef3e8f57fbb3ae32f6d3cca50238e 340 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 339 48.034 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Acife_2535 72fef3e8f57fbb3ae32f6d3cca50238e 340 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 7.6E-21 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Acife_2535 72fef3e8f57fbb3ae32f6d3cca50238e 340 SUPERFAMILY SSF55681 93 339 2.31E-74 T 12-10-2018 Acife_2535 72fef3e8f57fbb3ae32f6d3cca50238e 340 Pfam PF01409 tRNA synthetases class II core domain (F) 93 339 1.4E-99 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Acife_1599 507207a4ebe2306bb18cc6e79bd193f8 434 Gene3D G3DSA:3.30.70.270 256 430 1.2E-46 T 12-10-2018 Acife_1599 507207a4ebe2306bb18cc6e79bd193f8 434 SMART SM00267 250 422 1.8E-45 T 12-10-2018 IPR000160 GGDEF domain Acife_1599 507207a4ebe2306bb18cc6e79bd193f8 434 SUPERFAMILY SSF55073 266 422 2.43E-42 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_1599 507207a4ebe2306bb18cc6e79bd193f8 434 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 259 418 1.7E-36 T 12-10-2018 IPR000160 GGDEF domain Acife_1599 507207a4ebe2306bb18cc6e79bd193f8 434 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 416 8.3E-38 T 12-10-2018 IPR000160 GGDEF domain Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 Pfam PF13361 UvrD-like helicase C-terminal domain 663 846 8.7E-13 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 Gene3D G3DSA:3.40.50.300 471 870 2.5E-131 T 12-10-2018 Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 SUPERFAMILY SSF52980 926 1189 2.25E-58 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 SUPERFAMILY SSF52540 11 851 4.69E-101 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 Gene3D G3DSA:3.90.320.10 919 1194 2.3E-67 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 Gene3D G3DSA:1.10.486.10 614 759 2.5E-131 T 12-10-2018 Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 5 1189 9.4E-260 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 Gene3D G3DSA:3.40.50.300 5 459 8.5E-125 T 12-10-2018 Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 Gene3D G3DSA:1.10.3170.10 159 369 8.5E-125 T 12-10-2018 Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 Pfam PF12705 PD-(D/E)XK nuclease superfamily 966 1144 1.5E-4 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 3 1190 20.467 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Acife_0112 22a2363a1d76d610b7ba0b5da01dd4e0 1202 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 458 3.9E-49 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Acife_3132 b47f91e1b32597442f4189d156ca6f1f 783 Gene3D G3DSA:3.40.50.410 587 771 5.4E-16 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Acife_3132 b47f91e1b32597442f4189d156ca6f1f 783 SMART SM00327 591 779 1.2E-14 T 12-10-2018 IPR002035 von Willebrand factor, type A Acife_3132 b47f91e1b32597442f4189d156ca6f1f 783 SUPERFAMILY SSF53300 592 774 1.2E-20 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Acife_3132 b47f91e1b32597442f4189d156ca6f1f 783 Pfam PF00092 von Willebrand factor type A domain 594 750 8.6E-7 T 12-10-2018 IPR002035 von Willebrand factor, type A Acife_1532 3c81e6a90b3730038368db9f0d3b8eee 161 SMART SM00226 4 138 2.7E-35 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Acife_1532 3c81e6a90b3730038368db9f0d3b8eee 161 Gene3D G3DSA:3.40.50.2300 1 138 2.9E-37 T 12-10-2018 Acife_1532 3c81e6a90b3730038368db9f0d3b8eee 161 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 136 3.9E-20 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Acife_1532 3c81e6a90b3730038368db9f0d3b8eee 161 SUPERFAMILY SSF52788 4 138 2.49E-38 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Acife_2662 6a231c9b4cf9b99f0a267de0282f2b2a 158 Pfam PF09278 MerR, DNA binding 49 111 1.1E-18 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding Acife_2662 6a231c9b4cf9b99f0a267de0282f2b2a 158 Pfam PF00376 MerR family regulatory protein 6 43 1.1E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2662 6a231c9b4cf9b99f0a267de0282f2b2a 158 SUPERFAMILY SSF46955 6 131 3.41E-34 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Acife_2662 6a231c9b4cf9b99f0a267de0282f2b2a 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 9.0E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2662 6a231c9b4cf9b99f0a267de0282f2b2a 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 9.0E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2662 6a231c9b4cf9b99f0a267de0282f2b2a 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 9.0E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2662 6a231c9b4cf9b99f0a267de0282f2b2a 158 Gene3D G3DSA:1.10.1660.10 1 130 6.0E-36 T 12-10-2018 Acife_2662 6a231c9b4cf9b99f0a267de0282f2b2a 158 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2662 6a231c9b4cf9b99f0a267de0282f2b2a 158 SMART SM00422 5 74 4.9E-27 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_0662 f09610fd5fb887623c223b272abc0711 457 Gene3D G3DSA:1.10.4160.10 15 446 4.7E-39 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily Acife_0662 f09610fd5fb887623c223b272abc0711 457 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 23 420 2.6E-19 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 Gene3D G3DSA:3.30.540.10 1 139 6.0E-48 T 12-10-2018 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 7.4E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 7.4E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 7.4E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 7.4E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 7.4E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 7.4E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 Pfam PF00459 Inositol monophosphatase family 2 254 1.7E-65 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 SUPERFAMILY SSF56655 3 258 4.06E-85 T 12-10-2018 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Acife_1095 ee00e607bceee891b132fcf730c71e89 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 5.8E-27 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 5.8E-27 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 5.8E-27 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 5.8E-27 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Acife_1095 ee00e607bceee891b132fcf730c71e89 265 Gene3D G3DSA:3.40.190.80 141 263 5.4E-40 T 12-10-2018 Acife_2052 384c2a7342771da49bf12e2a10893beb 220 Pfam PF00929 Exonuclease 4 148 1.2E-4 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Acife_2052 384c2a7342771da49bf12e2a10893beb 220 Gene3D G3DSA:3.30.420.10 4 173 4.0E-24 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_2052 384c2a7342771da49bf12e2a10893beb 220 SUPERFAMILY SSF53098 1 192 3.73E-27 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_2052 384c2a7342771da49bf12e2a10893beb 220 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 180 202 8.3E-6 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor Acife_2052 384c2a7342771da49bf12e2a10893beb 220 SMART SM00479 2 163 4.2E-5 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Acife_2868 1dd7d7bccd5af11418697d69e413fb26 278 SUPERFAMILY SSF53335 8 263 4.01E-75 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2868 1dd7d7bccd5af11418697d69e413fb26 278 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 258 35.254 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Acife_2868 1dd7d7bccd5af11418697d69e413fb26 278 Gene3D G3DSA:3.40.50.150 1 270 2.4E-85 T 12-10-2018 Acife_2868 1dd7d7bccd5af11418697d69e413fb26 278 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 259 1.9E-62 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Acife_2041 5667bd5dbe0ce5e9648163384b7996f7 327 SUPERFAMILY SSF53448 1 249 3.19E-37 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2041 5667bd5dbe0ce5e9648163384b7996f7 327 Gene3D G3DSA:3.90.550.10 1 206 1.1E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2041 5667bd5dbe0ce5e9648163384b7996f7 327 Pfam PF00535 Glycosyl transferase family 2 4 165 3.1E-28 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_0666 4aeec3caaf0f42c849104ff548cabaf9 131 SUPERFAMILY SSF53167 2 86 5.72E-8 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Acife_0666 4aeec3caaf0f42c849104ff548cabaf9 131 Gene3D G3DSA:3.40.50.1580 15 121 7.2E-11 T 12-10-2018 Acife_2930 c430ff1fc307923ca0972e1e341dab71 394 Gene3D G3DSA:3.40.50.2000 186 356 7.9E-30 T 12-10-2018 Acife_2930 c430ff1fc307923ca0972e1e341dab71 394 Pfam PF00534 Glycosyl transferases group 1 204 349 3.2E-22 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_2930 c430ff1fc307923ca0972e1e341dab71 394 SUPERFAMILY SSF53756 9 376 3.85E-48 T 12-10-2018 Acife_2625 808d6927151949322a2688e944e89695 588 SUPERFAMILY SSF52218 56 199 3.39E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Acife_2625 808d6927151949322a2688e944e89695 588 Pfam PF00258 Flavodoxin 60 187 1.2E-25 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Acife_2625 808d6927151949322a2688e944e89695 588 SUPERFAMILY SSF63380 216 436 4.33E-58 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Acife_2625 808d6927151949322a2688e944e89695 588 PIRSF PIRSF000207 1 588 8.4E-211 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2625 808d6927151949322a2688e944e89695 588 Pfam PF00667 FAD binding domain 221 415 2.3E-25 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 PRINTS PR00369 Flavodoxin signature 59 72 1.4E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 PRINTS PR00369 Flavodoxin signature 107 118 1.4E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 PRINTS PR00369 Flavodoxin signature 139 149 1.4E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 258 268 3.0E-25 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 472 481 3.0E-25 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 539 547 3.0E-25 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 485 496 3.0E-25 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 410 419 3.0E-25 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 516 532 3.0E-25 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 447 466 3.0E-25 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 377 384 3.0E-25 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 Gene3D G3DSA:3.40.50.360 49 207 6.5E-43 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Acife_2625 808d6927151949322a2688e944e89695 588 SUPERFAMILY SSF52343 435 588 1.14E-47 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_2625 808d6927151949322a2688e944e89695 588 Gene3D G3DSA:3.40.50.80 436 588 1.6E-52 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_2625 808d6927151949322a2688e944e89695 588 Pfam PF00175 Oxidoreductase NAD-binding domain 448 553 5.6E-18 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 Gene3D G3DSA:1.20.990.10 268 375 5.8E-66 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 Acife_2625 808d6927151949322a2688e944e89695 588 Gene3D G3DSA:2.40.30.10 223 430 5.8E-66 T 12-10-2018 Acife_3067 846481a9821bab339b5d6918e755527b 709 Gene3D G3DSA:1.10.460.10 136 546 4.0E-115 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Acife_3067 846481a9821bab339b5d6918e755527b 709 Pfam PF01751 Toprim domain 4 112 1.3E-20 T 12-10-2018 IPR006171 TOPRIM domain Acife_3067 846481a9821bab339b5d6918e755527b 709 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 561 1.0E-143 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Acife_3067 846481a9821bab339b5d6918e755527b 709 SMART SM00436 105 193 2.6E-35 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Acife_3067 846481a9821bab339b5d6918e755527b 709 Gene3D G3DSA:2.70.20.10 185 457 4.0E-115 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Acife_3067 846481a9821bab339b5d6918e755527b 709 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 651 46.06 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Acife_3067 846481a9821bab339b5d6918e755527b 709 Gene3D G3DSA:1.10.290.10 253 373 4.0E-115 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Acife_3067 846481a9821bab339b5d6918e755527b 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 163 181 6.1E-33 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_3067 846481a9821bab339b5d6918e755527b 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 6.1E-33 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_3067 846481a9821bab339b5d6918e755527b 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 358 374 6.1E-33 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_3067 846481a9821bab339b5d6918e755527b 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 287 296 6.1E-33 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_3067 846481a9821bab339b5d6918e755527b 709 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 78 91 6.1E-33 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_3067 846481a9821bab339b5d6918e755527b 709 SMART SM00437 245 512 8.6E-87 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Acife_3067 846481a9821bab339b5d6918e755527b 709 Pfam PF01131 DNA topoisomerase 129 547 5.0E-104 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_3067 846481a9821bab339b5d6918e755527b 709 Gene3D G3DSA:3.40.50.140 1 135 4.5E-40 T 12-10-2018 Acife_3067 846481a9821bab339b5d6918e755527b 709 SMART SM00493 2 104 6.8E-18 T 12-10-2018 IPR006171 TOPRIM domain Acife_3067 846481a9821bab339b5d6918e755527b 709 SUPERFAMILY SSF56712 3 635 2.22E-151 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Acife_2545 a1aebc39496e874ce8164fe5f6703776 199 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 164 2.7E-37 T 12-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2545 a1aebc39496e874ce8164fe5f6703776 199 Gene3D G3DSA:1.20.120.1200 5 166 1.5E-43 T 12-10-2018 Acife_1858 bff6636bc8138433953f6091bb6c8158 191 SUPERFAMILY SSF46689 129 186 1.75E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_1858 bff6636bc8138433953f6091bb6c8158 191 Gene3D G3DSA:3.40.50.2300 19 132 4.5E-32 T 12-10-2018 Acife_1858 bff6636bc8138433953f6091bb6c8158 191 SMART SM00448 18 129 3.1E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1858 bff6636bc8138433953f6091bb6c8158 191 Pfam PF00072 Response regulator receiver domain 20 129 6.7E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1858 bff6636bc8138433953f6091bb6c8158 191 SUPERFAMILY SSF52172 19 145 9.53E-36 T 12-10-2018 IPR011006 CheY-like superfamily Acife_1858 bff6636bc8138433953f6091bb6c8158 191 Pfam PF02954 Bacterial regulatory protein, Fis family 148 186 2.4E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_1858 bff6636bc8138433953f6091bb6c8158 191 Gene3D G3DSA:1.10.10.60 133 189 2.6E-21 T 12-10-2018 Acife_1858 bff6636bc8138433953f6091bb6c8158 191 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 170 190 3.6E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_1858 bff6636bc8138433953f6091bb6c8158 191 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 153 170 3.6E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_1981 3f8ce5a063f2bf8d58bd4cec106ead5d 518 Pfam PF13817 IS66 C-terminal element 461 497 1.6E-11 T 12-10-2018 IPR039552 Transposase IS66, C-terminal Acife_1981 3f8ce5a063f2bf8d58bd4cec106ead5d 518 Pfam PF03050 Transposase IS66 family 170 454 2.5E-77 T 12-10-2018 IPR004291 Transposase, IS66 Acife_1981 3f8ce5a063f2bf8d58bd4cec106ead5d 518 Pfam PF13007 Transposase C of IS166 homeodomain 25 80 2.4E-7 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 Gene3D G3DSA:3.30.420.40 8 195 4.4E-57 T 12-10-2018 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 SUPERFAMILY SSF53067 8 195 2.14E-51 T 12-10-2018 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 TIGRFAM TIGR00016 ackA: acetate kinase 7 389 6.3E-110 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 PRINTS PR00471 Acetate kinase family signature 318 334 5.1E-39 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 PRINTS PR00471 Acetate kinase family signature 9 20 5.1E-39 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 PRINTS PR00471 Acetate kinase family signature 175 188 5.1E-39 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 PRINTS PR00471 Acetate kinase family signature 296 309 5.1E-39 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 PRINTS PR00471 Acetate kinase family signature 200 221 5.1E-39 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 PRINTS PR00471 Acetate kinase family signature 370 382 5.1E-39 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 SUPERFAMILY SSF53067 159 389 1.79E-73 T 12-10-2018 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 9 20 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 Pfam PF00871 Acetokinase family 9 383 9.0E-107 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 Gene3D G3DSA:3.30.420.40 196 395 4.3E-68 T 12-10-2018 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 200 217 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 PIRSF PIRSF000722 5 393 7.6E-126 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2012 17b1ac158f4397318d582672bec0fd5e 396 Hamap MF_00020 Acetate kinase [ackA]. 1 392 142.53 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Acife_2146 aba693c4e2614fdae7e6f65cba0b3efd 440 Gene3D G3DSA:2.40.420.20 334 427 3.4E-20 T 12-10-2018 Acife_2146 aba693c4e2614fdae7e6f65cba0b3efd 440 Gene3D G3DSA:2.40.420.20 109 120 1.6E-13 T 12-10-2018 Acife_2146 aba693c4e2614fdae7e6f65cba0b3efd 440 Gene3D G3DSA:2.40.30.170 258 330 1.1E-27 T 12-10-2018 Acife_2146 aba693c4e2614fdae7e6f65cba0b3efd 440 Gene3D G3DSA:2.40.50.100 135 169 1.6E-13 T 12-10-2018 Acife_2146 aba693c4e2614fdae7e6f65cba0b3efd 440 Gene3D G3DSA:1.10.287.470 195 207 1.1E-27 T 12-10-2018 Acife_2146 aba693c4e2614fdae7e6f65cba0b3efd 440 Gene3D G3DSA:2.40.30.170 121 134 1.6E-13 T 12-10-2018 Acife_2146 aba693c4e2614fdae7e6f65cba0b3efd 440 Gene3D G3DSA:1.10.287.470 170 185 1.6E-13 T 12-10-2018 Acife_2146 aba693c4e2614fdae7e6f65cba0b3efd 440 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 118 329 3.1E-78 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_2146 aba693c4e2614fdae7e6f65cba0b3efd 440 SUPERFAMILY SSF111369 133 334 2.35E-20 T 12-10-2018 Acife_2146 aba693c4e2614fdae7e6f65cba0b3efd 440 Gene3D G3DSA:2.40.50.100 208 257 1.1E-27 T 12-10-2018 Acife_2146 aba693c4e2614fdae7e6f65cba0b3efd 440 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 108 400 8.1E-38 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Acife_2969 397eb1df6e12f104e5c15201bcf9a0f1 168 Gene3D G3DSA:3.40.630.30 2 161 3.5E-45 T 12-10-2018 Acife_2969 397eb1df6e12f104e5c15201bcf9a0f1 168 Pfam PF13508 Acetyltransferase (GNAT) domain 43 147 1.5E-8 T 12-10-2018 IPR000182 GNAT domain Acife_2969 397eb1df6e12f104e5c15201bcf9a0f1 168 SUPERFAMILY SSF55729 20 152 5.67E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_0932 222969be69c1743a8962797cb480f14a 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 130 4.7E-34 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Acife_0932 222969be69c1743a8962797cb480f14a 134 Gene3D G3DSA:3.30.420.270 59 128 2.7E-13 T 12-10-2018 Acife_2393 80cdc4507a4d9974934ad5b8d8804b86 103 SUPERFAMILY SSF47240 7 93 2.11E-24 T 12-10-2018 IPR009078 Ferritin-like superfamily Acife_2393 80cdc4507a4d9974934ad5b8d8804b86 103 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 7 101 2.3E-41 T 12-10-2018 IPR030907 Ferritin-like protein Acife_3097 c503263d42f1941e035bfe5af0c3aa7b 228 Gene3D G3DSA:3.40.50.300 12 214 5.2E-49 T 12-10-2018 Acife_3097 c503263d42f1941e035bfe5af0c3aa7b 228 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 22 203 26.406 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Acife_3097 c503263d42f1941e035bfe5af0c3aa7b 228 Pfam PF01926 50S ribosome-binding GTPase 36 154 8.0E-18 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_3097 c503263d42f1941e035bfe5af0c3aa7b 228 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 18 199 4.5E-64 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Acife_3097 c503263d42f1941e035bfe5af0c3aa7b 228 SUPERFAMILY SSF52540 26 203 1.0E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0530 8278da4887c338a51653f0d3aae18d9e 427 SUPERFAMILY SSF57783 11 98 1.02E-10 T 12-10-2018 Acife_0530 8278da4887c338a51653f0d3aae18d9e 427 Pfam PF13362 Toprim domain 270 371 1.1E-7 T 12-10-2018 IPR006171 TOPRIM domain Acife_0530 8278da4887c338a51653f0d3aae18d9e 427 SMART SM00778 34 74 3.5E-7 T 12-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 Acife_0530 8278da4887c338a51653f0d3aae18d9e 427 Pfam PF08273 Zinc-binding domain of primase-helicase 34 74 3.1E-9 T 12-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 Acife_1225 e8cd49d7c755ef4414de9b271ac980fd 279 Gene3D G3DSA:3.60.21.10 2 270 2.0E-61 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Acife_1225 e8cd49d7c755ef4414de9b271ac980fd 279 SUPERFAMILY SSF56300 3 269 4.1E-46 T 12-10-2018 Acife_1225 e8cd49d7c755ef4414de9b271ac980fd 279 PIRSF PIRSF000903 2 272 1.9E-79 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Acife_1225 e8cd49d7c755ef4414de9b271ac980fd 279 Pfam PF00149 Calcineurin-like phosphoesterase 4 185 5.4E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 SUPERFAMILY SSF54211 231 486 9.86E-97 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 Gene3D G3DSA:3.40.50.11260 398 487 5.1E-31 T 12-10-2018 Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 Gene3D G3DSA:3.30.230.80 230 397 1.2E-69 T 12-10-2018 Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 PRINTS PR00775 90kDa heat shock protein signature 27 49 1.2E-56 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 PRINTS PR00775 90kDa heat shock protein signature 94 111 1.2E-56 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 PRINTS PR00775 90kDa heat shock protein signature 173 190 1.2E-56 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 PRINTS PR00775 90kDa heat shock protein signature 121 143 1.2E-56 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 PRINTS PR00775 90kDa heat shock protein signature 192 210 1.2E-56 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 PRINTS PR00775 90kDa heat shock protein signature 6 26 1.2E-56 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 PRINTS PR00775 90kDa heat shock protein signature 76 93 1.2E-56 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 SMART SM00387 28 185 1.6E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 PIRSF PIRSF002583 1 629 6.7E-207 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 Gene3D G3DSA:1.20.120.790 494 626 2.4E-43 T 12-10-2018 IPR037196 HSP90, C-terminal domain Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 Pfam PF00183 Hsp90 protein 222 625 1.2E-127 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 SUPERFAMILY SSF110942 513 625 2.09E-34 T 12-10-2018 IPR037196 HSP90, C-terminal domain Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 182 2.4E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 SUPERFAMILY SSF55874 6 212 1.31E-62 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 Gene3D G3DSA:3.30.565.10 1 229 2.7E-73 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 Hamap MF_00505 Chaperone protein HtpG [htpG]. 3 625 32.008 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Acife_1572 1cfd9ca14fa6a37e2810835ce4c72b2b 629 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 26 35 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 Acife_1226 f4e4e93ddf6472ca2698b9b5f4365ba2 115 SUPERFAMILY SSF75169 1 115 2.19E-7 T 12-10-2018 IPR027396 DsrEFH-like Acife_1226 f4e4e93ddf6472ca2698b9b5f4365ba2 115 Pfam PF02635 DsrE/DsrF-like family 15 114 7.6E-6 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Acife_1226 f4e4e93ddf6472ca2698b9b5f4365ba2 115 Gene3D G3DSA:3.40.1260.10 3 114 1.3E-10 T 12-10-2018 IPR027396 DsrEFH-like Acife_2456 2a05b32bfc1370b67d19ca57a9d185c4 832 Gene3D G3DSA:3.40.50.410 630 806 2.8E-13 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Acife_2456 2a05b32bfc1370b67d19ca57a9d185c4 832 SMART SM00327 636 828 4.6E-6 T 12-10-2018 IPR002035 von Willebrand factor, type A Acife_2456 2a05b32bfc1370b67d19ca57a9d185c4 832 SUPERFAMILY SSF53300 639 820 3.34E-14 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Acife_0205 73a1796df65011e99da2cffae0bf0a91 141 SUPERFAMILY SSF55729 9 133 4.05E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_0205 73a1796df65011e99da2cffae0bf0a91 141 Gene3D G3DSA:3.40.630.30 5 137 1.4E-19 T 12-10-2018 Acife_0205 73a1796df65011e99da2cffae0bf0a91 141 Pfam PF00583 Acetyltransferase (GNAT) family 21 128 2.0E-9 T 12-10-2018 IPR000182 GNAT domain Acife_1223 a236cb89a5a47a69f73745c6abe81aa2 104 SMART SM01219 1 104 9.0E-29 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Acife_1223 a236cb89a5a47a69f73745c6abe81aa2 104 Pfam PF01491 Frataxin-like domain 1 100 4.4E-18 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Acife_1223 a236cb89a5a47a69f73745c6abe81aa2 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 4 102 1.6E-25 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Acife_1223 a236cb89a5a47a69f73745c6abe81aa2 104 Gene3D G3DSA:3.30.920.10 1 104 1.6E-23 T 12-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Acife_1223 a236cb89a5a47a69f73745c6abe81aa2 104 SUPERFAMILY SSF55387 1 101 6.98E-22 T 12-10-2018 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 Gene3D G3DSA:3.40.1170.10 4 124 1.2E-47 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 Pfam PF01624 MutS domain I 11 122 1.5E-39 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 PIRSF PIRSF037677 2 170 6.1E-23 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 PIRSF PIRSF037677 193 813 4.5E-122 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 686 702 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 Gene3D G3DSA:3.40.50.300 568 838 3.3E-98 T 12-10-2018 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 SUPERFAMILY SSF55271 5 118 4.84E-40 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 837 22.737 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 Pfam PF05192 MutS domain III 270 557 3.3E-34 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 Pfam PF05188 MutS domain II 133 250 9.2E-10 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 SUPERFAMILY SSF53150 117 266 1.31E-22 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 Pfam PF05190 MutS family domain IV 426 516 1.3E-26 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 Gene3D G3DSA:3.30.420.110 132 261 1.0E-19 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 SUPERFAMILY SSF52540 565 793 3.1E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 SMART SM00534 605 789 4.5E-117 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 SMART SM00533 282 589 5.4E-86 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 Gene3D G3DSA:1.10.1420.10 385 501 3.6E-89 T 12-10-2018 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 842 1.9E-303 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 SUPERFAMILY SSF48334 267 562 3.66E-75 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 Pfam PF00488 MutS domain V 609 792 2.8E-79 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Acife_2054 2e0e765b017a93a01a9fb94a63d4108a 846 Gene3D G3DSA:1.10.1420.10 266 557 3.6E-89 T 12-10-2018 Acife_2733 a21041c6c97c6a3415da287838e9111e 218 Gene3D G3DSA:2.40.30.20 1 89 3.1E-26 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_2733 a21041c6c97c6a3415da287838e9111e 218 PIRSF PIRSF000498 1 211 8.4E-72 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2733 a21041c6c97c6a3415da287838e9111e 218 Pfam PF00677 Lumazine binding domain 101 184 1.1E-22 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2733 a21041c6c97c6a3415da287838e9111e 218 Pfam PF00677 Lumazine binding domain 3 87 2.9E-20 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2733 a21041c6c97c6a3415da287838e9111e 218 SUPERFAMILY SSF63380 1 93 5.36E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Acife_2733 a21041c6c97c6a3415da287838e9111e 218 SUPERFAMILY SSF63380 93 195 2.21E-31 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Acife_2733 a21041c6c97c6a3415da287838e9111e 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 195 2.0E-59 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2733 a21041c6c97c6a3415da287838e9111e 218 Gene3D G3DSA:2.40.30.20 102 200 9.2E-32 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_0643 83df684689b8d9018ca7f1848e3391d7 132 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 131 1.6E-27 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Acife_0643 83df684689b8d9018ca7f1848e3391d7 132 Gene3D G3DSA:3.30.420.270 60 127 1.3E-9 T 12-10-2018 Acife_3043 c13b2348da6531ff994da7bf397dda7a 864 SUPERFAMILY SSF52540 436 749 3.15E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3043 c13b2348da6531ff994da7bf397dda7a 864 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 17 250 1.1E-29 T 12-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase Acife_3043 c13b2348da6531ff994da7bf397dda7a 864 Gene3D G3DSA:1.10.8.730 509 624 3.1E-30 T 12-10-2018 Acife_3043 c13b2348da6531ff994da7bf397dda7a 864 Gene3D G3DSA:3.40.50.300 445 739 3.1E-30 T 12-10-2018 Acife_3043 c13b2348da6531ff994da7bf397dda7a 864 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 29 817 4.5E-221 T 12-10-2018 IPR014117 Type-IV secretion system protein TraC Acife_2637 c90796cf18deeda462061d90117e007d 311 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 301 78.883 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Acife_2637 c90796cf18deeda462061d90117e007d 311 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 1.3E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Acife_2637 c90796cf18deeda462061d90117e007d 311 PRINTS PR00102 Ornithine carbamoyltransferase signature 217 227 1.3E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Acife_2637 c90796cf18deeda462061d90117e007d 311 PRINTS PR00102 Ornithine carbamoyltransferase signature 279 290 1.3E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Acife_2637 c90796cf18deeda462061d90117e007d 311 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 1.3E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Acife_2637 c90796cf18deeda462061d90117e007d 311 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 1.3E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Acife_2637 c90796cf18deeda462061d90117e007d 311 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 300 1.3E-115 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Acife_2637 c90796cf18deeda462061d90117e007d 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 298 7.0E-50 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Acife_2637 c90796cf18deeda462061d90117e007d 311 SUPERFAMILY SSF53671 2 301 1.31E-103 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Acife_2637 c90796cf18deeda462061d90117e007d 311 Gene3D G3DSA:3.40.50.1370 4 133 1.9E-116 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Acife_2637 c90796cf18deeda462061d90117e007d 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Acife_2637 c90796cf18deeda462061d90117e007d 311 Gene3D G3DSA:3.40.50.1370 134 296 1.9E-116 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Acife_2637 c90796cf18deeda462061d90117e007d 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 1.8E-51 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Acife_2637 c90796cf18deeda462061d90117e007d 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.6E-28 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Acife_2637 c90796cf18deeda462061d90117e007d 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 5.6E-28 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Acife_2637 c90796cf18deeda462061d90117e007d 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 5.6E-28 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Acife_2637 c90796cf18deeda462061d90117e007d 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 5.6E-28 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Acife_2279 b1ca5f5479c358f6b7e9e3ddde91279e 609 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 204 408 4.1E-17 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Acife_2279 b1ca5f5479c358f6b7e9e3ddde91279e 609 Gene3D G3DSA:3.40.30.10 487 608 1.2E-28 T 12-10-2018 Acife_2279 b1ca5f5479c358f6b7e9e3ddde91279e 609 Pfam PF11412 Disulphide bond corrector protein DsbC 36 152 4.8E-31 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Acife_2279 b1ca5f5479c358f6b7e9e3ddde91279e 609 Pfam PF13899 Thioredoxin-like 509 568 8.9E-11 T 12-10-2018 Acife_2279 b1ca5f5479c358f6b7e9e3ddde91279e 609 Gene3D G3DSA:2.60.40.1250 30 168 1.6E-36 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Acife_2279 b1ca5f5479c358f6b7e9e3ddde91279e 609 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 17 609 32.628 T 12-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 Acife_2279 b1ca5f5479c358f6b7e9e3ddde91279e 609 SUPERFAMILY SSF74863 35 152 3.14E-29 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Acife_2279 b1ca5f5479c358f6b7e9e3ddde91279e 609 SUPERFAMILY SSF52833 496 607 1.17E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0064 e4348a14494b68bc50a879ed7f1fb4b2 448 SUPERFAMILY SSF53850 26 319 6.09E-31 T 12-10-2018 Acife_0064 e4348a14494b68bc50a879ed7f1fb4b2 448 Gene3D G3DSA:3.40.190.10 25 168 2.0E-18 T 12-10-2018 Acife_0064 e4348a14494b68bc50a879ed7f1fb4b2 448 Pfam PF09084 NMT1/THI5 like 116 265 7.3E-9 T 12-10-2018 IPR015168 SsuA/THI5-like Acife_0064 e4348a14494b68bc50a879ed7f1fb4b2 448 Gene3D G3DSA:3.40.190.10 219 338 8.1E-17 T 12-10-2018 Acife_0225 ee66e9a1034baca0e8ea33e4f534b2f0 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 1.8E-11 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal Acife_0225 ee66e9a1034baca0e8ea33e4f534b2f0 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 80 1.6E-6 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Acife_0225 ee66e9a1034baca0e8ea33e4f534b2f0 204 SUPERFAMILY SSF47616 84 199 5.57E-30 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Acife_0225 ee66e9a1034baca0e8ea33e4f534b2f0 204 Gene3D G3DSA:1.20.1050.10 82 188 4.3E-72 T 12-10-2018 Acife_0225 ee66e9a1034baca0e8ea33e4f534b2f0 204 SUPERFAMILY SSF52833 1 84 6.2E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0225 ee66e9a1034baca0e8ea33e4f534b2f0 204 Gene3D G3DSA:3.40.30.10 3 193 4.3E-72 T 12-10-2018 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 SUPERFAMILY SSF54980 402 496 3.74E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 Pfam PF00679 Elongation factor G C-terminus 402 488 3.5E-21 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 Gene3D G3DSA:3.40.50.300 2 188 2.0E-71 T 12-10-2018 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 PRINTS PR00315 GTP-binding elongation factor signature 129 138 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 PRINTS PR00315 GTP-binding elongation factor signature 77 87 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 PRINTS PR00315 GTP-binding elongation factor signature 52 60 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 PRINTS PR00315 GTP-binding elongation factor signature 93 104 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 Gene3D G3DSA:2.40.30.10 189 288 4.8E-30 T 12-10-2018 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 Gene3D G3DSA:3.30.70.870 289 370 1.5E-35 T 12-10-2018 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 9.7E-51 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 Hamap MF_00071 Elongation factor 4 [lepA]. 1 600 298.081 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 SMART SM00838 401 489 0.0077 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 1.4E-295 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 SUPERFAMILY SSF52540 3 209 1.31E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 5.2E-50 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 Gene3D G3DSA:3.30.70.3380 371 481 2.9E-40 T 12-10-2018 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 SUPERFAMILY SSF50447 168 291 2.29E-27 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 Gene3D G3DSA:3.30.70.2570 482 556 4.5E-33 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 SUPERFAMILY SSF54980 295 373 8.99E-19 T 12-10-2018 IPR035647 EF-G domain III/V-like Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 Pfam PF03144 Elongation factor Tu domain 2 208 278 2.7E-7 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Acife_1762 895bfba1aa6ca6307bac35f029cb1fd5 600 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 177 1.6E-18 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_2829 ca9262b56e09698db54098c1de470bfc 158 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 7.2E-48 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Acife_2829 ca9262b56e09698db54098c1de470bfc 158 SUPERFAMILY SSF51230 77 151 1.44E-23 T 12-10-2018 IPR011053 Single hybrid motif Acife_2829 ca9262b56e09698db54098c1de470bfc 158 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 108 125 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Acife_2829 ca9262b56e09698db54098c1de470bfc 158 Pfam PF00364 Biotin-requiring enzyme 79 151 1.1E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Acife_2829 ca9262b56e09698db54098c1de470bfc 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 8.7E-17 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Acife_2829 ca9262b56e09698db54098c1de470bfc 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 8.7E-17 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Acife_2829 ca9262b56e09698db54098c1de470bfc 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 8.7E-17 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Acife_2829 ca9262b56e09698db54098c1de470bfc 158 Gene3D G3DSA:2.40.50.100 75 151 7.0E-29 T 12-10-2018 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 5.3E-37 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 5.5E-81 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 5.5E-81 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 5.5E-81 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 5.5E-81 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 5.5E-81 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 5.5E-81 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 5.5E-81 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 Gene3D G3DSA:3.40.50.10860 8 276 2.2E-104 T 12-10-2018 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 282 1.1E-67 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.388 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 SUPERFAMILY SSF51735 123 280 4.41E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 SUPERFAMILY SSF53223 3 122 9.59E-37 T 12-10-2018 Acife_1414 59b25edc74bfd3b5786404eb3fb8b1aa 287 Gene3D G3DSA:3.40.50.720 6 259 2.2E-104 T 12-10-2018 Acife_0284 683e0389f3835532f102f94415c9525b 293 Pfam PF00482 Type II secretion system (T2SS), protein F 154 279 9.8E-21 T 12-10-2018 IPR018076 Type II secretion system F domain Acife_0284 683e0389f3835532f102f94415c9525b 293 Gene3D G3DSA:1.20.81.30 141 256 3.8E-9 T 12-10-2018 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 SMART SM00483 3 316 1.5E-29 T 12-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 Gene3D G3DSA:3.30.460.10 158 262 5.6E-28 T 12-10-2018 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 Pfam PF02811 PHP domain 341 468 5.4E-8 T 12-10-2018 IPR004013 PHP domain GO:0003824 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 SMART SM00278 94 113 29.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 SMART SM00278 54 73 0.089 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 SMART SM00278 129 148 250.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 SUPERFAMILY SSF47802 2 83 2.62E-22 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 Pfam PF14792 DNA polymerase beta palm 171 243 2.9E-6 T 12-10-2018 IPR028207 DNA polymerase beta, palm domain Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 Gene3D G3DSA:1.10.150.20 89 152 2.1E-19 T 12-10-2018 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 Gene3D G3DSA:3.20.20.140 328 574 4.8E-70 T 12-10-2018 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 Pfam PF14520 Helix-hairpin-helix domain 95 147 3.0E-12 T 12-10-2018 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 186 205 2.7E-10 T 12-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 61 78 2.7E-10 T 12-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 SMART SM00481 340 419 1.9E-17 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 SUPERFAMILY SSF47781 93 152 1.85E-7 T 12-10-2018 IPR010994 RuvA domain 2-like Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 SUPERFAMILY SSF81301 158 316 2.97E-43 T 12-10-2018 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 PIRSF PIRSF005047 3 574 1.5E-228 T 12-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 Gene3D G3DSA:1.10.150.110 2 88 9.0E-27 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 Pfam PF14716 Helix-hairpin-helix domain 5 75 1.9E-22 T 12-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 SUPERFAMILY SSF89550 339 569 9.03E-52 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 Gene3D G3DSA:3.30.210.10 263 327 1.5E-24 T 12-10-2018 IPR037160 DNA polymerase, thumb domain superfamily Acife_3108 667d40ca476fd684bba659fae34dc4f7 576 Pfam PF14791 DNA polymerase beta thumb 256 316 4.5E-19 T 12-10-2018 IPR029398 DNA polymerase beta, thumb domain Acife_2749 f589ddd3fcdad98cf48c459027102b78 157 Gene3D G3DSA:1.10.10.10 4 87 1.4E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2749 f589ddd3fcdad98cf48c459027102b78 157 Pfam PF01475 Ferric uptake regulator family 14 133 1.3E-43 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Acife_2749 f589ddd3fcdad98cf48c459027102b78 157 SUPERFAMILY SSF46785 9 137 1.88E-42 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2749 f589ddd3fcdad98cf48c459027102b78 157 Gene3D G3DSA:3.30.1490.190 89 142 9.0E-22 T 12-10-2018 Acife_2826 cbe24ca7b8a98e191f8060743f0c79ea 141 Gene3D G3DSA:1.25.10.10 12 135 5.0E-11 T 12-10-2018 IPR011989 Armadillo-like helical Acife_2826 cbe24ca7b8a98e191f8060743f0c79ea 141 SUPERFAMILY SSF48371 42 123 1.27E-6 T 12-10-2018 IPR016024 Armadillo-type fold Acife_3087 b6bf84bca39c84827dbc0221773c6bfd 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 Acife_3087 b6bf84bca39c84827dbc0221773c6bfd 142 Pfam PF00572 Ribosomal protein L13 15 138 1.8E-59 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Acife_3087 b6bf84bca39c84827dbc0221773c6bfd 142 Gene3D G3DSA:3.90.1180.10 1 142 6.8E-65 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Acife_3087 b6bf84bca39c84827dbc0221773c6bfd 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 1.1E-64 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_3087 b6bf84bca39c84827dbc0221773c6bfd 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.25 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Acife_3087 b6bf84bca39c84827dbc0221773c6bfd 142 PIRSF PIRSF002181 1 142 2.1E-54 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Acife_3087 b6bf84bca39c84827dbc0221773c6bfd 142 SUPERFAMILY SSF52161 1 139 2.35E-61 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Acife_2735 2716713e99b8b909a3647ed747182c0e 163 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 8.8E-63 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Acife_2735 2716713e99b8b909a3647ed747182c0e 163 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 85.253 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Acife_2735 2716713e99b8b909a3647ed747182c0e 163 Pfam PF03477 ATP cone domain 50 136 2.0E-15 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Acife_2188 753755e19cc1d6975bcddb76030da5b9 371 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 4 363 1.3E-159 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Acife_2188 753755e19cc1d6975bcddb76030da5b9 371 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 359 1.5E-86 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Acife_2188 753755e19cc1d6975bcddb76030da5b9 371 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 363 2.5E-153 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Acife_2188 753755e19cc1d6975bcddb76030da5b9 371 SUPERFAMILY SSF51713 3 362 1.31E-151 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Acife_2188 753755e19cc1d6975bcddb76030da5b9 371 Gene3D G3DSA:3.20.20.105 2 366 2.4E-157 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Acife_2188 753755e19cc1d6975bcddb76030da5b9 371 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 362 54.638 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Acife_0787 d3922fb12c587e295e71013a54579db3 552 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 125 135 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Acife_0787 d3922fb12c587e295e71013a54579db3 552 SUPERFAMILY SSF55008 4 71 3.67E-14 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Acife_0787 d3922fb12c587e295e71013a54579db3 552 PIRSF PIRSF000350 2 552 1.5E-235 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Acife_0787 d3922fb12c587e295e71013a54579db3 552 Pfam PF00403 Heavy-metal-associated domain 7 65 5.7E-11 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Acife_0787 d3922fb12c587e295e71013a54579db3 552 Gene3D G3DSA:3.50.50.60 236 352 1.9E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_0787 d3922fb12c587e295e71013a54579db3 552 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Acife_0787 d3922fb12c587e295e71013a54579db3 552 PRINTS PR00945 Mercuric reductase class II signature 228 245 1.2E-69 T 12-10-2018 Acife_0787 d3922fb12c587e295e71013a54579db3 552 PRINTS PR00945 Mercuric reductase class II signature 102 120 1.2E-69 T 12-10-2018 Acife_0787 d3922fb12c587e295e71013a54579db3 552 PRINTS PR00945 Mercuric reductase class II signature 137 156 1.2E-69 T 12-10-2018 Acife_0787 d3922fb12c587e295e71013a54579db3 552 PRINTS PR00945 Mercuric reductase class II signature 460 480 1.2E-69 T 12-10-2018 Acife_0787 d3922fb12c587e295e71013a54579db3 552 PRINTS PR00945 Mercuric reductase class II signature 525 544 1.2E-69 T 12-10-2018 Acife_0787 d3922fb12c587e295e71013a54579db3 552 PRINTS PR00945 Mercuric reductase class II signature 16 26 1.2E-69 T 12-10-2018 Acife_0787 d3922fb12c587e295e71013a54579db3 552 PRINTS PR00945 Mercuric reductase class II signature 263 280 1.2E-69 T 12-10-2018 Acife_0787 d3922fb12c587e295e71013a54579db3 552 PRINTS PR00945 Mercuric reductase class II signature 283 298 1.2E-69 T 12-10-2018 Acife_0787 d3922fb12c587e295e71013a54579db3 552 Gene3D G3DSA:3.30.390.30 427 552 5.0E-42 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_0787 d3922fb12c587e295e71013a54579db3 552 Gene3D G3DSA:3.30.70.100 5 70 5.0E-15 T 12-10-2018 Acife_0787 d3922fb12c587e295e71013a54579db3 552 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 92 409 4.3E-60 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_0787 d3922fb12c587e295e71013a54579db3 552 Gene3D G3DSA:3.50.50.60 94 410 1.9E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_0787 d3922fb12c587e295e71013a54579db3 552 SUPERFAMILY SSF55424 424 550 2.75E-32 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_0787 d3922fb12c587e295e71013a54579db3 552 SUPERFAMILY SSF51905 90 447 4.54E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_0787 d3922fb12c587e295e71013a54579db3 552 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 428 534 1.5E-26 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Acife_0787 d3922fb12c587e295e71013a54579db3 552 TIGRFAM TIGR02053 MerA: mercury(II) reductase 92 552 2.6E-173 T 12-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 Pfam PF00128 Alpha amylase, catalytic domain 280 351 6.8E-9 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 116 729 2.3E-278 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 PIRSF PIRSF000463 17 735 1.4E-287 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 131 214 3.2E-23 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 Gene3D G3DSA:2.60.40.1180 630 732 1.1E-34 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 SUPERFAMILY SSF51445 189 623 4.56E-113 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 Gene3D G3DSA:2.60.40.10 13 228 1.8E-63 T 12-10-2018 IPR013783 Immunoglobulin-like fold Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 107 732 44.642 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 SUPERFAMILY SSF81296 145 199 4.2E-9 T 12-10-2018 IPR014756 Immunoglobulin E-set Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 635 731 5.2E-21 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 SUPERFAMILY SSF51011 631 731 1.41E-32 T 12-10-2018 Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 Gene3D G3DSA:3.20.20.80 230 629 1.9E-165 T 12-10-2018 Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 SMART SM00642 257 615 1.3E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Acife_0314 559ea43be11b8fab7b4c5efae4232f98 735 SUPERFAMILY SSF81296 26 120 5.95E-12 T 12-10-2018 IPR014756 Immunoglobulin E-set Acife_2082 b64000f8d59067806f6fe4ef171ff694 188 Pfam PF00072 Response regulator receiver domain 4 110 2.9E-7 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_2082 b64000f8d59067806f6fe4ef171ff694 188 Gene3D G3DSA:3.40.50.2300 1 124 1.8E-13 T 12-10-2018 Acife_2082 b64000f8d59067806f6fe4ef171ff694 188 Pfam PF03861 ANTAR domain 132 184 5.0E-20 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 Acife_2082 b64000f8d59067806f6fe4ef171ff694 188 SUPERFAMILY SSF52172 1 184 1.38E-41 T 12-10-2018 IPR011006 CheY-like superfamily Acife_2082 b64000f8d59067806f6fe4ef171ff694 188 PIRSF PIRSF036382 1 188 1.5E-48 T 12-10-2018 IPR008327 Signal transduction response regulator, antiterminator Acife_2082 b64000f8d59067806f6fe4ef171ff694 188 SMART SM01012 129 184 5.3E-22 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 Acife_2082 b64000f8d59067806f6fe4ef171ff694 188 SMART SM00448 2 113 3.4E-4 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_2082 b64000f8d59067806f6fe4ef171ff694 188 Gene3D G3DSA:1.10.10.10 132 188 1.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2779 e1d9951c1c6c6f669d2a84e7dbee6241 236 PIRSF PIRSF037208 1 236 9.3E-79 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Acife_2779 e1d9951c1c6c6f669d2a84e7dbee6241 236 SUPERFAMILY SSF55729 73 228 1.04E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_2779 e1d9951c1c6c6f669d2a84e7dbee6241 236 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 1 227 35.379 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Acife_2779 e1d9951c1c6c6f669d2a84e7dbee6241 236 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 9 79 8.0E-18 T 12-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Acife_2779 e1d9951c1c6c6f669d2a84e7dbee6241 236 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 100 219 1.1E-31 T 12-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Acife_1296 ad33764859b731c509a1726cb3d22135 250 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 5 227 2.8E-102 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_1296 ad33764859b731c509a1726cb3d22135 250 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 7 18 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Acife_1296 ad33764859b731c509a1726cb3d22135 250 Gene3D G3DSA:1.10.287.610 104 151 3.4E-91 T 12-10-2018 Acife_1296 ad33764859b731c509a1726cb3d22135 250 SUPERFAMILY SSF52313 7 228 3.4E-94 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Acife_1296 ad33764859b731c509a1726cb3d22135 250 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Acife_1296 ad33764859b731c509a1726cb3d22135 250 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.9E-34 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1296 ad33764859b731c509a1726cb3d22135 250 PRINTS PR00395 Ribosomal protein S2 signature 38 47 1.9E-34 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1296 ad33764859b731c509a1726cb3d22135 250 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.9E-34 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1296 ad33764859b731c509a1726cb3d22135 250 PRINTS PR00395 Ribosomal protein S2 signature 7 25 1.9E-34 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1296 ad33764859b731c509a1726cb3d22135 250 PRINTS PR00395 Ribosomal protein S2 signature 88 105 1.9E-34 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1296 ad33764859b731c509a1726cb3d22135 250 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.9E-34 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1296 ad33764859b731c509a1726cb3d22135 250 Pfam PF00318 Ribosomal protein S2 10 225 5.6E-95 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1296 ad33764859b731c509a1726cb3d22135 250 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 3 226 42.19 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_1296 ad33764859b731c509a1726cb3d22135 250 Gene3D G3DSA:3.40.50.10490 10 220 3.4E-91 T 12-10-2018 Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 SMART SM00490 243 324 2.9E-26 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 SMART SM00956 405 508 2.4E-48 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 Pfam PF09382 RQC domain 400 510 8.4E-37 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 SUPERFAMILY SSF47819 525 595 4.14E-20 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 Pfam PF00271 Helicase conserved C-terminal domain 217 323 4.6E-16 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 592 1.1E-240 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 457 7.1E-158 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 SUPERFAMILY SSF52540 5 187 1.09E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 SUPERFAMILY SSF52540 199 449 1.89E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 Gene3D G3DSA:3.40.50.300 200 333 4.0E-39 T 12-10-2018 Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 Gene3D G3DSA:1.10.150.80 524 595 9.5E-22 T 12-10-2018 Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 SMART SM00341 522 597 8.7E-8 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 Gene3D G3DSA:1.10.10.10 334 519 1.6E-51 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 SMART SM00487 13 209 4.4E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 Pfam PF00570 HRDC domain 526 592 1.4E-20 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 Pfam PF16124 RecQ zinc-binding 336 398 2.1E-19 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 Gene3D G3DSA:3.40.50.300 2 199 2.1E-79 T 12-10-2018 Acife_1224 25d9a0840c921c773d98277b29bfbb3e 598 Pfam PF00270 DEAD/DEAH box helicase 20 179 1.8E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Acife_1446 916e6cf090da73de8222ab58ab2f9c5c 284 Gene3D G3DSA:3.30.470.10 14 112 7.6E-23 T 12-10-2018 Acife_1446 916e6cf090da73de8222ab58ab2f9c5c 284 Pfam PF01063 Amino-transferase class IV 31 254 2.3E-36 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Acife_1446 916e6cf090da73de8222ab58ab2f9c5c 284 ProSitePatterns PS00770 Aminotransferases class-IV signature. 181 210 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Acife_1446 916e6cf090da73de8222ab58ab2f9c5c 284 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 21 260 2.5E-56 T 12-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 Acife_1446 916e6cf090da73de8222ab58ab2f9c5c 284 Gene3D G3DSA:3.20.10.10 122 277 4.8E-41 T 12-10-2018 Acife_1446 916e6cf090da73de8222ab58ab2f9c5c 284 SUPERFAMILY SSF56752 21 278 1.23E-55 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Acife_1118 0a91872825bb82a3db11aa3bc95d8589 369 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 113 363 6.5E-69 T 12-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Acife_1118 0a91872825bb82a3db11aa3bc95d8589 369 Pfam PF02405 Permease MlaE 153 360 9.5E-68 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Acife_0986 da601717da400328fe762cb27e7ed576 506 SUPERFAMILY SSF56317 222 481 5.1E-37 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Acife_0986 da601717da400328fe762cb27e7ed576 506 Pfam PF00795 Carbon-nitrogen hydrolase 227 474 2.3E-26 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Acife_0986 da601717da400328fe762cb27e7ed576 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 65 449 1.4E-80 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Acife_0986 da601717da400328fe762cb27e7ed576 506 Gene3D G3DSA:3.60.110.10 219 467 2.3E-21 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Acife_0986 da601717da400328fe762cb27e7ed576 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 11 487 20.06 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Acife_1749 3a152a1aacac64e8d5edfae3c16f3a32 265 SUPERFAMILY SSF48317 75 262 1.96E-7 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Acife_1749 3a152a1aacac64e8d5edfae3c16f3a32 265 Pfam PF01569 PAP2 superfamily 170 264 5.5E-13 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Acife_1749 3a152a1aacac64e8d5edfae3c16f3a32 265 SMART SM00014 141 261 0.0049 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Acife_1749 3a152a1aacac64e8d5edfae3c16f3a32 265 Gene3D G3DSA:1.20.144.10 164 265 1.1E-9 T 12-10-2018 Acife_1655 fa38e5782c06b597b1b3f909448a2a85 522 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 82 93 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_1655 fa38e5782c06b597b1b3f909448a2a85 522 Pfam PF04055 Radical SAM superfamily 82 260 5.5E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_1655 fa38e5782c06b597b1b3f909448a2a85 522 SUPERFAMILY SSF102114 70 284 2.88E-34 T 12-10-2018 Acife_1655 fa38e5782c06b597b1b3f909448a2a85 522 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 54 493 1.7E-209 T 12-10-2018 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 Acife_1655 fa38e5782c06b597b1b3f909448a2a85 522 Gene3D G3DSA:3.20.20.70 68 370 5.2E-29 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1655 fa38e5782c06b597b1b3f909448a2a85 522 SUPERFAMILY SSF53146 387 499 1.44E-29 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Acife_1655 fa38e5782c06b597b1b3f909448a2a85 522 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 397 490 2.5E-18 T 12-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Acife_1655 fa38e5782c06b597b1b3f909448a2a85 522 Gene3D G3DSA:3.30.420.130 382 500 1.6E-25 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Acife_2739 84a0fb8ba82d3639c9587dad74c0f5f6 201 Gene3D G3DSA:3.40.50.150 2 186 2.9E-22 T 12-10-2018 Acife_2739 84a0fb8ba82d3639c9587dad74c0f5f6 201 Pfam PF07021 Methionine biosynthesis protein MetW 4 195 1.2E-79 T 12-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 Acife_2739 84a0fb8ba82d3639c9587dad74c0f5f6 201 SUPERFAMILY SSF53335 7 180 3.28E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2739 84a0fb8ba82d3639c9587dad74c0f5f6 201 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 4 195 4.7E-80 T 12-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 Acife_1731 579202f2bd2b36b89fb84be862cf907d 193 Pfam PF14235 Domain of unknown function (DUF4337) 31 189 7.5E-39 T 12-10-2018 IPR025570 Protein of unknown function DUF4337 Acife_2074 4654a68b879290cbb099dd145e6a189a 467 Gene3D G3DSA:1.20.1250.20 8 192 2.6E-36 T 12-10-2018 Acife_2074 4654a68b879290cbb099dd145e6a189a 467 Gene3D G3DSA:1.20.1250.20 254 441 4.1E-43 T 12-10-2018 Acife_2074 4654a68b879290cbb099dd145e6a189a 467 Pfam PF07690 Major Facilitator Superfamily 21 401 2.6E-28 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_2074 4654a68b879290cbb099dd145e6a189a 467 SUPERFAMILY SSF103473 12 447 9.42E-45 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_0987 ead2000b67c9b8624961fe453166d252 448 Pfam PF01523 Putative modulator of DNA gyrase 33 325 9.8E-63 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Acife_0987 ead2000b67c9b8624961fe453166d252 448 SUPERFAMILY SSF111283 14 447 2.88E-128 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Acife_0987 ead2000b67c9b8624961fe453166d252 448 Gene3D G3DSA:3.30.2290.10 2 234 1.6E-89 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Acife_0965 d22295ddf04aeddf9aefe02834f8de53 828 Pfam PF00343 Carbohydrate phosphorylase 110 821 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Acife_0965 d22295ddf04aeddf9aefe02834f8de53 828 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 26 821 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Acife_0965 d22295ddf04aeddf9aefe02834f8de53 828 Gene3D G3DSA:3.40.50.2000 480 806 0.0 T 12-10-2018 Acife_0965 d22295ddf04aeddf9aefe02834f8de53 828 SUPERFAMILY SSF53756 16 824 0.0 T 12-10-2018 Acife_0965 d22295ddf04aeddf9aefe02834f8de53 828 PIRSF PIRSF000460 15 827 1.2E-220 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Acife_0965 d22295ddf04aeddf9aefe02834f8de53 828 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 666 678 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Acife_0965 d22295ddf04aeddf9aefe02834f8de53 828 Gene3D G3DSA:3.40.50.2000 35 823 0.0 T 12-10-2018 Acife_2835 3bcfa5d6d762738b8c3b83c0e739d2ad 138 Pfam PF04386 Stringent starvation protein B 6 137 2.5E-29 T 12-10-2018 IPR007481 Stringent starvation protein B Acife_2835 3bcfa5d6d762738b8c3b83c0e739d2ad 138 PIRSF PIRSF005276 3 138 3.0E-43 T 12-10-2018 IPR007481 Stringent starvation protein B Acife_2835 3bcfa5d6d762738b8c3b83c0e739d2ad 138 SUPERFAMILY SSF101738 5 112 6.02E-38 T 12-10-2018 IPR036760 SspB-like superfamily Acife_2835 3bcfa5d6d762738b8c3b83c0e739d2ad 138 Gene3D G3DSA:2.30.30.220 2 122 1.4E-43 T 12-10-2018 IPR036760 SspB-like superfamily Acife_2927 c17d64f806c57af2b9c65c5c119dcc8d 72 Pfam PF02416 mttA/Hcf106 family 5 50 3.4E-14 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Acife_2927 c17d64f806c57af2b9c65c5c119dcc8d 72 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 69 20.573 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Acife_2927 c17d64f806c57af2b9c65c5c119dcc8d 72 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 2.3E-20 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Acife_0245 317eb69772950c24bdb2de84f0141a34 392 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 49 392 1.3E-63 T 12-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 Acife_2107 72e642838addff4933c902fee666cb09 134 Gene3D G3DSA:2.30.30.240 12 107 6.0E-18 T 12-10-2018 Acife_2107 72e642838addff4933c902fee666cb09 134 SUPERFAMILY SSF50346 24 77 2.16E-13 T 12-10-2018 IPR011033 PRC-barrel-like superfamily Acife_2107 72e642838addff4933c902fee666cb09 134 Pfam PF05239 PRC-barrel domain 26 77 3.0E-12 T 12-10-2018 IPR027275 PRC-barrel domain Acife_2810 2123d61a3a69e5c079aa3d46719a9474 151 Pfam PF02381 MraZ protein, putative antitoxin-like 1 79 3.1E-14 T 12-10-2018 IPR020603 MraZ domain Acife_2810 2123d61a3a69e5c079aa3d46719a9474 151 Pfam PF02381 MraZ protein, putative antitoxin-like 84 136 2.8E-15 T 12-10-2018 IPR020603 MraZ domain Acife_2810 2123d61a3a69e5c079aa3d46719a9474 151 SUPERFAMILY SSF89447 1 142 4.92E-44 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_2810 2123d61a3a69e5c079aa3d46719a9474 151 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 133 9.1E-41 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Acife_2810 2123d61a3a69e5c079aa3d46719a9474 151 Gene3D G3DSA:2.40.330.20 1 143 6.2E-44 T 12-10-2018 IPR038619 MraZ superfamily Acife_2810 2123d61a3a69e5c079aa3d46719a9474 151 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 130 2.0E-34 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Acife_2810 2123d61a3a69e5c079aa3d46719a9474 151 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 151 51.763 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Acife_1819 84bd5b676e6fdc1e60954e4215d4471e 276 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 235 267 1.4E-7 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Acife_1819 84bd5b676e6fdc1e60954e4215d4471e 276 PIRSF PIRSF006816 4 272 1.3E-62 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 Acife_1819 84bd5b676e6fdc1e60954e4215d4471e 276 Gene3D G3DSA:2.40.30.10 6 101 1.9E-14 T 12-10-2018 Acife_1819 84bd5b676e6fdc1e60954e4215d4471e 276 SUPERFAMILY SSF52343 98 267 2.1E-28 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_1819 84bd5b676e6fdc1e60954e4215d4471e 276 SUPERFAMILY SSF63380 5 103 5.73E-20 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Acife_1819 84bd5b676e6fdc1e60954e4215d4471e 276 Gene3D G3DSA:3.40.50.80 105 231 5.7E-20 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_1819 84bd5b676e6fdc1e60954e4215d4471e 276 Pfam PF00175 Oxidoreductase NAD-binding domain 115 217 1.1E-12 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Acife_1819 84bd5b676e6fdc1e60954e4215d4471e 276 PRINTS PR00406 Cytochrome B5 reductase signature 203 211 6.5E-10 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Acife_1819 84bd5b676e6fdc1e60954e4215d4471e 276 PRINTS PR00406 Cytochrome B5 reductase signature 90 104 6.5E-10 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Acife_1819 84bd5b676e6fdc1e60954e4215d4471e 276 PRINTS PR00406 Cytochrome B5 reductase signature 152 163 6.5E-10 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Acife_1819 84bd5b676e6fdc1e60954e4215d4471e 276 PRINTS PR00406 Cytochrome B5 reductase signature 114 133 6.5E-10 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 SUPERFAMILY SSF49503 39 188 2.5E-24 T 12-10-2018 IPR008972 Cupredoxin Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 ProSitePatterns PS00079 Multicopper oxidases signature 1. 166 186 - T 12-10-2018 IPR033138 Multicopper oxidases, conserved site Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 PRINTS PR00158 Rusticyanin signature 72 89 4.2E-79 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 PRINTS PR00158 Rusticyanin signature 112 131 4.2E-79 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 PRINTS PR00158 Rusticyanin signature 50 70 4.2E-79 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 PRINTS PR00158 Rusticyanin signature 91 110 4.2E-79 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 PRINTS PR00158 Rusticyanin signature 138 156 4.2E-79 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 PRINTS PR00158 Rusticyanin signature 159 181 4.2E-79 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 99 189 5.7E-6 T 12-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 Gene3D G3DSA:2.60.40.420 36 189 2.4E-54 T 12-10-2018 IPR008972 Cupredoxin Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 165 182 - T 12-10-2018 IPR028871 Blue (type 1) copper protein, binding site Acife_0470 e39d6746d0fc8b89f55b93bacaa229f6 189 TIGRFAM TIGR03095 rusti_cyanin: rusticyanin 48 189 1.0E-70 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1881 e091df1a753b833b975a03138295a788 557 SUPERFAMILY SSF143975 4 378 2.75E-137 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1881 e091df1a753b833b975a03138295a788 557 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1881 e091df1a753b833b975a03138295a788 557 SUPERFAMILY SSF52016 380 557 1.1E-57 T 12-10-2018 Acife_1881 e091df1a753b833b975a03138295a788 557 Pfam PF00920 Dehydratase family 35 554 1.5E-210 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1881 e091df1a753b833b975a03138295a788 557 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 5 557 45.648 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1881 e091df1a753b833b975a03138295a788 557 Gene3D G3DSA:3.50.30.80 379 528 1.9E-52 T 12-10-2018 Acife_1881 e091df1a753b833b975a03138295a788 557 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 557 8.3E-240 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1881 e091df1a753b833b975a03138295a788 557 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Acife_1919 fec19277871a799057db1f4ff732491f 896 Gene3D G3DSA:3.30.70.370 783 896 9.4E-12 T 12-10-2018 Acife_1919 fec19277871a799057db1f4ff732491f 896 Gene3D G3DSA:1.10.150.20 649 782 4.8E-9 T 12-10-2018 Acife_1919 fec19277871a799057db1f4ff732491f 896 ProSitePatterns PS00447 DNA polymerase family A signature. 709 728 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_1919 fec19277871a799057db1f4ff732491f 896 Pfam PF00476 DNA polymerase family A 436 561 3.2E-11 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_1919 fec19277871a799057db1f4ff732491f 896 Pfam PF00476 DNA polymerase family A 708 895 1.3E-19 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_1919 fec19277871a799057db1f4ff732491f 896 SUPERFAMILY SSF56672 653 895 5.23E-29 T 12-10-2018 Acife_1919 fec19277871a799057db1f4ff732491f 896 SMART SM00482 530 857 1.0E-6 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_1919 fec19277871a799057db1f4ff732491f 896 Gene3D G3DSA:3.30.70.370 511 552 1.8E-10 T 12-10-2018 Acife_1919 fec19277871a799057db1f4ff732491f 896 SUPERFAMILY SSF53098 163 340 4.14E-10 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_1919 fec19277871a799057db1f4ff732491f 896 SUPERFAMILY SSF56672 363 561 1.89E-21 T 12-10-2018 Acife_2899 e7cf2cd88fc6b09a3defb4f79a2936f0 299 Pfam PF03668 P-loop ATPase protein family 5 293 5.1E-85 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 Acife_2899 e7cf2cd88fc6b09a3defb4f79a2936f0 299 PIRSF PIRSF005052 4 296 2.0E-100 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 Acife_2899 e7cf2cd88fc6b09a3defb4f79a2936f0 299 SUPERFAMILY SSF52540 6 162 5.58E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2899 e7cf2cd88fc6b09a3defb4f79a2936f0 299 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 4 294 38.513 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 Acife_2899 e7cf2cd88fc6b09a3defb4f79a2936f0 299 Gene3D G3DSA:3.40.50.300 5 163 3.6E-5 T 12-10-2018 Acife_0282 1d435150781c4a7dc1ee6f03c4ca59a5 229 Gene3D G3DSA:1.10.10.10 70 223 6.6E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0282 1d435150781c4a7dc1ee6f03c4ca59a5 229 SMART SM00421 149 206 1.6E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Acife_0282 1d435150781c4a7dc1ee6f03c4ca59a5 229 SUPERFAMILY SSF46894 138 207 2.69E-11 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Acife_0282 1d435150781c4a7dc1ee6f03c4ca59a5 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 202 1.3E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Acife_1228 00e72eae493ea7834212a41be22083d1 335 SUPERFAMILY SSF52540 14 222 2.27E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1228 00e72eae493ea7834212a41be22083d1 335 ProSitePatterns PS00211 ABC transporters family signature. 114 128 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_1228 00e72eae493ea7834212a41be22083d1 335 SMART SM00382 19 190 2.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1228 00e72eae493ea7834212a41be22083d1 335 Pfam PF00005 ABC transporter 16 142 3.2E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_1228 00e72eae493ea7834212a41be22083d1 335 Gene3D G3DSA:2.40.50.140 217 332 1.8E-6 T 12-10-2018 Acife_1228 00e72eae493ea7834212a41be22083d1 335 Gene3D G3DSA:3.40.50.300 5 214 9.2E-57 T 12-10-2018 Acife_1228 00e72eae493ea7834212a41be22083d1 335 SUPERFAMILY SSF50331 216 332 1.39E-13 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Acife_1228 00e72eae493ea7834212a41be22083d1 335 Gene3D G3DSA:2.40.50.100 259 328 1.8E-6 T 12-10-2018 Acife_3227 07807f11b179e9c8096904b25b0884c1 378 Gene3D G3DSA:3.90.550.10 1 214 1.5E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3227 07807f11b179e9c8096904b25b0884c1 378 Pfam PF00535 Glycosyl transferase family 2 2 157 5.3E-16 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_3227 07807f11b179e9c8096904b25b0884c1 378 SUPERFAMILY SSF53448 2 244 6.26E-27 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3139 c60c36e128e566c95313cc09d4806283 98 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 8 69 1.0E-19 T 12-10-2018 Acife_3139 c60c36e128e566c95313cc09d4806283 98 Pfam PF00936 BMC domain 8 83 1.5E-24 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Acife_3139 c60c36e128e566c95313cc09d4806283 98 SMART SM00877 7 84 1.3E-28 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Acife_3139 c60c36e128e566c95313cc09d4806283 98 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 25 44 - T 12-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Acife_3139 c60c36e128e566c95313cc09d4806283 98 SUPERFAMILY SSF143414 8 94 2.09E-27 T 12-10-2018 IPR037233 CcmK-like superfamily Acife_3139 c60c36e128e566c95313cc09d4806283 98 Gene3D G3DSA:3.30.70.1710 1 98 8.5E-35 T 12-10-2018 Acife_2800 57f4bab73b58cdd3934910295477cff2 320 Gene3D G3DSA:3.90.550.10 1 229 2.0E-40 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2800 57f4bab73b58cdd3934910295477cff2 320 SUPERFAMILY SSF53448 2 260 5.63E-47 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2800 57f4bab73b58cdd3934910295477cff2 320 Pfam PF00535 Glycosyl transferase family 2 5 165 7.7E-30 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_2445 c03f9d60724bab8879ddd42728136165 782 SUPERFAMILY SSF52540 17 193 6.07E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2445 c03f9d60724bab8879ddd42728136165 782 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 41 59 1.4E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_2445 c03f9d60724bab8879ddd42728136165 782 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 68 83 1.4E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_2445 c03f9d60724bab8879ddd42728136165 782 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 20 40 1.4E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_2445 c03f9d60724bab8879ddd42728136165 782 Pfam PF02421 Ferrous iron transport protein B 20 172 6.1E-58 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Acife_2445 c03f9d60724bab8879ddd42728136165 782 Pfam PF07664 Ferrous iron transport protein B C terminus 467 519 7.5E-23 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Acife_2445 c03f9d60724bab8879ddd42728136165 782 Pfam PF07670 Nucleoside recognition 525 709 5.3E-26 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Acife_2445 c03f9d60724bab8879ddd42728136165 782 Pfam PF07670 Nucleoside recognition 363 454 8.2E-12 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Acife_2445 c03f9d60724bab8879ddd42728136165 782 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 20 172 5.1E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_2445 c03f9d60724bab8879ddd42728136165 782 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 24 706 2.1E-172 T 12-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 Acife_2445 c03f9d60724bab8879ddd42728136165 782 Gene3D G3DSA:3.40.50.300 18 186 1.5E-43 T 12-10-2018 Acife_3104 959eeafea3be9335e8a80292cb7eebcb 709 Gene3D G3DSA:3.40.50.300 275 629 1.9E-116 T 12-10-2018 Acife_3104 959eeafea3be9335e8a80292cb7eebcb 709 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 265 1.4E-66 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Acife_3104 959eeafea3be9335e8a80292cb7eebcb 709 Pfam PF13361 UvrD-like helicase C-terminal domain 271 609 3.2E-70 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Acife_3104 959eeafea3be9335e8a80292cb7eebcb 709 Gene3D G3DSA:3.40.50.300 7 267 1.0E-89 T 12-10-2018 Acife_3104 959eeafea3be9335e8a80292cb7eebcb 709 SUPERFAMILY SSF52540 6 635 6.91E-166 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3104 959eeafea3be9335e8a80292cb7eebcb 709 Gene3D G3DSA:1.10.486.10 376 531 1.9E-116 T 12-10-2018 Acife_3104 959eeafea3be9335e8a80292cb7eebcb 709 Gene3D G3DSA:1.10.10.160 110 183 1.0E-89 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily Acife_1727 65efca86a9cef6a0311217762cc17bb0 95 SUPERFAMILY SSF116734 4 77 1.54E-15 T 12-10-2018 Acife_1727 65efca86a9cef6a0311217762cc17bb0 95 Gene3D G3DSA:1.10.287.1120 28 71 3.3E-18 T 12-10-2018 Acife_1727 65efca86a9cef6a0311217762cc17bb0 95 Gene3D G3DSA:3.90.220.20 4 27 3.3E-18 T 12-10-2018 Acife_2176 ba8a7e59a0acda0969c5889613ce21f4 416 Pfam PF01266 FAD dependent oxidoreductase 7 398 1.3E-54 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Acife_2176 ba8a7e59a0acda0969c5889613ce21f4 416 SUPERFAMILY SSF51905 7 416 8.16E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2176 ba8a7e59a0acda0969c5889613ce21f4 416 SUPERFAMILY SSF54373 271 359 5.23E-11 T 12-10-2018 Acife_2176 ba8a7e59a0acda0969c5889613ce21f4 416 Gene3D G3DSA:3.50.50.60 127 399 1.7E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2176 ba8a7e59a0acda0969c5889613ce21f4 416 Gene3D G3DSA:3.30.9.10 137 358 1.7E-45 T 12-10-2018 Acife_2176 ba8a7e59a0acda0969c5889613ce21f4 416 Gene3D G3DSA:3.50.50.60 1 82 6.6E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1675 72742953d0f4512d6f6253f4b6ed954b 189 SUPERFAMILY SSF50182 109 173 3.92E-11 T 12-10-2018 IPR010920 LSM domain superfamily Acife_1675 72742953d0f4512d6f6253f4b6ed954b 189 Pfam PF00924 Mechanosensitive ion channel 63 170 1.5E-14 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Acife_1675 72742953d0f4512d6f6253f4b6ed954b 189 Gene3D G3DSA:2.30.30.60 124 173 4.6E-7 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Acife_1213 1624d7ea5111c843af699aaaa6dc151f 449 Pfam PF06965 Na+/H+ antiporter 1 22 439 8.6E-143 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Acife_1213 1624d7ea5111c843af699aaaa6dc151f 449 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 23 439 2.5E-127 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Acife_1213 1624d7ea5111c843af699aaaa6dc151f 449 Gene3D G3DSA:1.20.1530.10 279 447 1.5E-49 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily Acife_1213 1624d7ea5111c843af699aaaa6dc151f 449 Gene3D G3DSA:1.20.1530.10 17 278 4.1E-89 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily Acife_1213 1624d7ea5111c843af699aaaa6dc151f 449 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 20 445 22.373 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Acife_2823 4d1fd23f8022670d7655e64e2e0c6df8 279 Gene3D G3DSA:3.10.20.310 73 142 2.0E-14 T 12-10-2018 Acife_2823 4d1fd23f8022670d7655e64e2e0c6df8 279 Gene3D G3DSA:3.40.50.11690 144 272 1.0E-27 T 12-10-2018 Acife_2823 4d1fd23f8022670d7655e64e2e0c6df8 279 Pfam PF03799 Cell division protein FtsQ 147 261 8.9E-14 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB Acife_2823 4d1fd23f8022670d7655e64e2e0c6df8 279 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 48 269 18.083 T 12-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 Acife_2823 4d1fd23f8022670d7655e64e2e0c6df8 279 Pfam PF08478 POTRA domain, FtsQ-type 75 141 1.8E-13 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type Acife_2356 4f7e5a6260fc653d3665ba6d37eecd8b 310 SUPERFAMILY SSF54292 206 305 4.72E-19 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Acife_2356 4f7e5a6260fc653d3665ba6d37eecd8b 310 Gene3D G3DSA:3.40.50.80 99 213 2.0E-16 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_2356 4f7e5a6260fc653d3665ba6d37eecd8b 310 Gene3D G3DSA:2.40.30.10 1 95 1.9E-9 T 12-10-2018 Acife_2356 4f7e5a6260fc653d3665ba6d37eecd8b 310 Gene3D G3DSA:3.10.20.30 214 310 1.6E-19 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_2356 4f7e5a6260fc653d3665ba6d37eecd8b 310 Pfam PF00175 Oxidoreductase NAD-binding domain 108 144 1.3E-4 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Acife_2356 4f7e5a6260fc653d3665ba6d37eecd8b 310 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 259 267 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Acife_2356 4f7e5a6260fc653d3665ba6d37eecd8b 310 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 228 300 1.4E-7 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Acife_2356 4f7e5a6260fc653d3665ba6d37eecd8b 310 SUPERFAMILY SSF63380 4 102 5.02E-15 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Acife_2356 4f7e5a6260fc653d3665ba6d37eecd8b 310 SUPERFAMILY SSF52343 94 218 2.36E-17 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_0687 47d439860bd502dd692df18b51df3866 245 Gene3D G3DSA:3.30.420.490 116 227 2.1E-44 T 12-10-2018 Acife_0687 47d439860bd502dd692df18b51df3866 245 SUPERFAMILY SSF53067 116 239 2.37E-29 T 12-10-2018 Acife_0687 47d439860bd502dd692df18b51df3866 245 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 243 17.428 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Acife_0687 47d439860bd502dd692df18b51df3866 245 Pfam PF03309 Type III pantothenate kinase 1 195 1.1E-34 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Acife_0687 47d439860bd502dd692df18b51df3866 245 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 1 235 8.9E-34 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Acife_0687 47d439860bd502dd692df18b51df3866 245 SUPERFAMILY SSF53067 2 110 4.34E-5 T 12-10-2018 Acife_0687 47d439860bd502dd692df18b51df3866 245 Gene3D G3DSA:3.30.420.40 2 234 2.1E-44 T 12-10-2018 Acife_3023 581aef4c6ba152a3af0db6b45b60c3cc 220 Pfam PF08378 Nuclease-related domain 24 121 1.8E-21 T 12-10-2018 IPR011528 Nuclease-related domain, NERD Acife_1761 bef5731484fd28b0a4a9cd8a8c3755ec 263 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 43 243 1.6E-50 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Acife_1761 bef5731484fd28b0a4a9cd8a8c3755ec 263 Pfam PF00717 Peptidase S24-like 64 145 1.7E-20 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Acife_1761 bef5731484fd28b0a4a9cd8a8c3755ec 263 Gene3D G3DSA:2.170.230.10 133 202 1.8E-65 T 12-10-2018 Acife_1761 bef5731484fd28b0a4a9cd8a8c3755ec 263 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 203 222 3.9E-24 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Acife_1761 bef5731484fd28b0a4a9cd8a8c3755ec 263 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 58 74 3.9E-24 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Acife_1761 bef5731484fd28b0a4a9cd8a8c3755ec 263 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 3.9E-24 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Acife_1761 bef5731484fd28b0a4a9cd8a8c3755ec 263 ProSitePatterns PS00760 Signal peptidases I lysine active site. 124 136 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Acife_1761 bef5731484fd28b0a4a9cd8a8c3755ec 263 Pfam PF10502 Signal peptidase, peptidase S26 200 240 1.7E-5 T 12-10-2018 IPR019533 Peptidase S26 Acife_1761 bef5731484fd28b0a4a9cd8a8c3755ec 263 Gene3D G3DSA:2.10.109.10 56 243 1.8E-65 T 12-10-2018 Acife_1761 bef5731484fd28b0a4a9cd8a8c3755ec 263 ProSitePatterns PS00501 Signal peptidases I serine active site. 67 74 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Acife_1761 bef5731484fd28b0a4a9cd8a8c3755ec 263 SUPERFAMILY SSF51306 56 256 2.62E-65 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 PIRSF PIRSF000099 2 431 3.1E-157 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 6.2E-87 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 6.2E-87 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 6.2E-87 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 6.2E-87 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 6.2E-87 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 6.2E-87 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 6.2E-87 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 6.2E-87 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 Gene3D G3DSA:3.40.50.1980 30 232 1.7E-128 T 12-10-2018 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 19 428 40.379 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 Gene3D G3DSA:3.40.50.1980 234 350 1.7E-128 T 12-10-2018 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 Pfam PF00815 Histidinol dehydrogenase 27 427 4.4E-165 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 8.3E-158 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Acife_2920 05be6102d85070cabbebc6cfc8a15cc6 433 SUPERFAMILY SSF53720 27 427 4.9E-85 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Acife_0653 8e9dc1afa48722a166d2b2b1863d0826 363 Gene3D G3DSA:3.30.1330.180 107 246 1.3E-42 T 12-10-2018 Acife_0653 8e9dc1afa48722a166d2b2b1863d0826 363 Pfam PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) 5 359 1.4E-129 T 12-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 Acife_0653 8e9dc1afa48722a166d2b2b1863d0826 363 Gene3D G3DSA:3.30.1330.170 1 104 9.5E-34 T 12-10-2018 Acife_0653 8e9dc1afa48722a166d2b2b1863d0826 363 Gene3D G3DSA:3.30.1330.160 247 362 5.1E-40 T 12-10-2018 Acife_0653 8e9dc1afa48722a166d2b2b1863d0826 363 TIGRFAM TIGR02714 amido_AtzD_TrzD: ring-opening amidohydrolases 5 359 3.8E-100 T 12-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 Acife_0653 8e9dc1afa48722a166d2b2b1863d0826 363 Hamap MF_01989 Cyanuric acid amidohydrolase. 1 362 32.722 T 12-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 Acife_2714 bc5df70ec9928caf4237aaefe54c7f6c 156 SUPERFAMILY SSF47973 2 149 6.93E-60 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Acife_2714 bc5df70ec9928caf4237aaefe54c7f6c 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.141 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Acife_2714 bc5df70ec9928caf4237aaefe54c7f6c 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2714 bc5df70ec9928caf4237aaefe54c7f6c 156 Gene3D G3DSA:1.10.455.10 2 156 7.4E-63 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Acife_2714 bc5df70ec9928caf4237aaefe54c7f6c 156 PIRSF PIRSF002122 5 156 1.7E-61 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Acife_2714 bc5df70ec9928caf4237aaefe54c7f6c 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.0E-65 T 12-10-2018 IPR023798 Ribosomal protein S7 domain Acife_2714 bc5df70ec9928caf4237aaefe54c7f6c 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.1E-67 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Acife_2693 5446cd46aebff8ecc7ac2067d59d2008 176 Gene3D G3DSA:3.30.160.20 5 75 3.7E-27 T 12-10-2018 Acife_2693 5446cd46aebff8ecc7ac2067d59d2008 176 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 13 167 1.7E-64 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Acife_2693 5446cd46aebff8ecc7ac2067d59d2008 176 Gene3D G3DSA:3.30.230.10 79 171 1.0E-36 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Acife_2693 5446cd46aebff8ecc7ac2067d59d2008 176 SUPERFAMILY SSF54211 83 163 5.56E-27 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2693 5446cd46aebff8ecc7ac2067d59d2008 176 Pfam PF03719 Ribosomal protein S5, C-terminal domain 90 161 5.6E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Acife_2693 5446cd46aebff8ecc7ac2067d59d2008 176 SUPERFAMILY SSF54768 11 79 3.14E-20 T 12-10-2018 Acife_2693 5446cd46aebff8ecc7ac2067d59d2008 176 Pfam PF00333 Ribosomal protein S5, N-terminal domain 15 78 1.8E-25 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Acife_2693 5446cd46aebff8ecc7ac2067d59d2008 176 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 167 34.85 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Acife_1625 ca14af3f6ae0b864f84d4794f135ac0e 565 SMART SM00382 363 490 0.005 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1625 ca14af3f6ae0b864f84d4794f135ac0e 565 SUPERFAMILY SSF52540 352 540 4.31E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1625 ca14af3f6ae0b864f84d4794f135ac0e 565 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 367 480 1.4E-14 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_1625 ca14af3f6ae0b864f84d4794f135ac0e 565 Gene3D G3DSA:3.40.50.300 334 508 2.5E-27 T 12-10-2018 Acife_2861 4ef543922a383370e51488ff356d1c48 569 Gene3D G3DSA:3.40.50.300 296 568 2.4E-108 T 12-10-2018 Acife_2861 4ef543922a383370e51488ff356d1c48 569 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 14 568 4.6E-229 T 12-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 Acife_2861 4ef543922a383370e51488ff356d1c48 569 SUPERFAMILY SSF160246 9 144 6.28E-29 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Acife_2861 4ef543922a383370e51488ff356d1c48 569 Pfam PF00437 Type II/IV secretion system protein 193 459 1.9E-83 T 12-10-2018 IPR001482 Type II/IV secretion system protein Acife_2861 4ef543922a383370e51488ff356d1c48 569 SUPERFAMILY SSF52540 179 567 1.24E-102 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2861 4ef543922a383370e51488ff356d1c48 569 Gene3D G3DSA:3.30.450.90 155 292 2.4E-44 T 12-10-2018 Acife_2861 4ef543922a383370e51488ff356d1c48 569 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 17 148 1.9E-17 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal Acife_2861 4ef543922a383370e51488ff356d1c48 569 SMART SM00382 320 441 0.0023 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2861 4ef543922a383370e51488ff356d1c48 569 Gene3D G3DSA:3.30.300.160 67 145 8.1E-8 T 12-10-2018 Acife_2861 4ef543922a383370e51488ff356d1c48 569 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 387 401 - T 12-10-2018 IPR001482 Type II/IV secretion system protein Acife_3123 d753629c8146e3eec40572475cd436af 165 SUPERFAMILY SSF55729 20 145 1.36E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_3123 d753629c8146e3eec40572475cd436af 165 Gene3D G3DSA:3.40.630.30 2 158 2.4E-43 T 12-10-2018 Acife_3123 d753629c8146e3eec40572475cd436af 165 Pfam PF13508 Acetyltransferase (GNAT) domain 42 143 8.3E-12 T 12-10-2018 IPR000182 GNAT domain Acife_1756 db9b5cf491a767445c4cd59e8409158a 241 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 124.296 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Acife_1756 db9b5cf491a767445c4cd59e8409158a 241 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 237 1.2E-92 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Acife_1756 db9b5cf491a767445c4cd59e8409158a 241 SUPERFAMILY SSF63892 1 239 3.4E-94 T 12-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Acife_1756 db9b5cf491a767445c4cd59e8409158a 241 Gene3D G3DSA:3.20.20.70 1 241 1.9E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1756 db9b5cf491a767445c4cd59e8409158a 241 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 4 236 6.4E-99 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Acife_2942 0e704ca94e00bea31fc34f44626143a8 143 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 9 136 4.7E-33 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Acife_2942 0e704ca94e00bea31fc34f44626143a8 143 SUPERFAMILY SSF53098 7 136 5.31E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_2942 0e704ca94e00bea31fc34f44626143a8 143 Gene3D G3DSA:3.30.420.140 4 139 1.5E-36 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Acife_2942 0e704ca94e00bea31fc34f44626143a8 143 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 6 141 21.022 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Acife_2942 0e704ca94e00bea31fc34f44626143a8 143 Pfam PF03652 Holliday junction resolvase 8 135 7.2E-36 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Acife_2942 0e704ca94e00bea31fc34f44626143a8 143 SMART SM00732 6 106 2.5E-26 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Acife_0398 19441fe97001deebc02fc72f6d5fa61d 303 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 265 297 4.5E-8 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Acife_0398 19441fe97001deebc02fc72f6d5fa61d 303 Pfam PF04471 Restriction endonuclease 130 240 7.0E-28 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 Acife_0398 19441fe97001deebc02fc72f6d5fa61d 303 Gene3D G3DSA:3.30.65.10 256 301 1.7E-6 T 12-10-2018 Acife_0398 19441fe97001deebc02fc72f6d5fa61d 303 SUPERFAMILY SSF57783 262 297 1.39E-6 T 12-10-2018 Acife_0398 19441fe97001deebc02fc72f6d5fa61d 303 SUPERFAMILY SSF52980 135 242 2.25E-19 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Acife_2547 aa79418cb6bd564b16be98a460c95cc2 341 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 335 25.928 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2547 aa79418cb6bd564b16be98a460c95cc2 341 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 57 72 - T 12-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2547 aa79418cb6bd564b16be98a460c95cc2 341 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 216 229 - T 12-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2547 aa79418cb6bd564b16be98a460c95cc2 341 Pfam PF00146 NADH dehydrogenase 17 328 7.1E-130 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_0487 1492270a8df21c8f1dfdc10358a24b1c 85 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 43 77 1.0E-5 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Acife_0487 1492270a8df21c8f1dfdc10358a24b1c 85 Pfam PF00550 Phosphopantetheine attachment site 8 73 3.1E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain Acife_0487 1492270a8df21c8f1dfdc10358a24b1c 85 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 4 76 1.9E-25 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Acife_0487 1492270a8df21c8f1dfdc10358a24b1c 85 SUPERFAMILY SSF47336 3 79 1.83E-16 T 12-10-2018 IPR036736 ACP-like superfamily Acife_0487 1492270a8df21c8f1dfdc10358a24b1c 85 Gene3D G3DSA:1.10.1200.10 1 80 2.7E-21 T 12-10-2018 IPR036736 ACP-like superfamily Acife_0487 1492270a8df21c8f1dfdc10358a24b1c 85 Hamap MF_01217 Acyl carrier protein [acpP]. 5 78 17.414 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Acife_1491 58a732760de4e14b5d8910353df1e76b 401 Pfam PF13673 Acetyltransferase (GNAT) domain 284 376 2.3E-12 T 12-10-2018 IPR000182 GNAT domain Acife_1491 58a732760de4e14b5d8910353df1e76b 401 Pfam PF01965 DJ-1/PfpI family 5 164 2.9E-28 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Acife_1491 58a732760de4e14b5d8910353df1e76b 401 Gene3D G3DSA:3.40.630.30 239 398 2.6E-29 T 12-10-2018 Acife_1491 58a732760de4e14b5d8910353df1e76b 401 SUPERFAMILY SSF52317 4 183 2.96E-49 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_1491 58a732760de4e14b5d8910353df1e76b 401 SUPERFAMILY SSF55729 240 399 5.49E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_1491 58a732760de4e14b5d8910353df1e76b 401 Gene3D G3DSA:3.40.50.880 1 224 2.4E-72 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_0958 636c391edae8c779c919c1877a99eff4 752 SUPERFAMILY SSF81923 1 141 4.05E-51 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Acife_0958 636c391edae8c779c919c1877a99eff4 752 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 12-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 Acife_0958 636c391edae8c779c919c1877a99eff4 752 Gene3D G3DSA:1.10.1780.10 1 142 9.5E-37 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Acife_0958 636c391edae8c779c919c1877a99eff4 752 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 647 1.1E-44 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_0958 636c391edae8c779c919c1877a99eff4 752 SUPERFAMILY SSF52540 171 423 6.35E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0958 636c391edae8c779c919c1877a99eff4 752 SMART SM01086 654 743 1.0E-29 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Acife_0958 636c391edae8c779c919c1877a99eff4 752 SUPERFAMILY SSF52540 439 739 8.99E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0958 636c391edae8c779c919c1877a99eff4 752 Gene3D G3DSA:3.40.50.300 165 354 1.3E-66 T 12-10-2018 Acife_0958 636c391edae8c779c919c1877a99eff4 752 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Acife_0958 636c391edae8c779c919c1877a99eff4 752 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 733 1.1E-22 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Acife_0958 636c391edae8c779c919c1877a99eff4 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 4.3E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_0958 636c391edae8c779c919c1877a99eff4 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 4.3E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_0958 636c391edae8c779c919c1877a99eff4 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 4.3E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_0958 636c391edae8c779c919c1877a99eff4 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 4.3E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_0958 636c391edae8c779c919c1877a99eff4 752 Gene3D G3DSA:1.10.8.60 654 751 1.3E-26 T 12-10-2018 Acife_0958 636c391edae8c779c919c1877a99eff4 752 Gene3D G3DSA:1.10.8.60 355 437 9.9E-31 T 12-10-2018 Acife_0958 636c391edae8c779c919c1877a99eff4 752 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 9.3E-14 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_0958 636c391edae8c779c919c1877a99eff4 752 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.1E-13 T 12-10-2018 IPR004176 Clp, N-terminal Acife_0958 636c391edae8c779c919c1877a99eff4 752 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 Acife_0958 636c391edae8c779c919c1877a99eff4 752 SMART SM00382 205 349 1.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0958 636c391edae8c779c919c1877a99eff4 752 SMART SM00382 486 651 4.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0958 636c391edae8c779c919c1877a99eff4 752 Gene3D G3DSA:3.40.50.300 439 652 1.6E-74 T 12-10-2018 Acife_2849 345e04dd903b36967065633cd7ed068e 226 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 74 222 2.8E-5 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Acife_2849 345e04dd903b36967065633cd7ed068e 226 SUPERFAMILY SSF89392 66 222 1.37E-13 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Acife_2849 345e04dd903b36967065633cd7ed068e 226 Gene3D G3DSA:2.50.20.10 64 225 1.7E-17 T 12-10-2018 Acife_0620 1f11ad446188a25d92f5f4ee599432d6 233 Gene3D G3DSA:3.60.15.10 1 219 5.9E-48 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_0620 1f11ad446188a25d92f5f4ee599432d6 233 SMART SM00849 12 171 1.9E-9 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_0620 1f11ad446188a25d92f5f4ee599432d6 233 SUPERFAMILY SSF56281 1 174 1.34E-30 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_2154 175f128ba651437675def57aec25cdb5 512 SMART SM00533 11 302 0.0025 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Acife_2154 175f128ba651437675def57aec25cdb5 512 Gene3D G3DSA:3.40.50.300 282 512 6.1E-60 T 12-10-2018 Acife_2154 175f128ba651437675def57aec25cdb5 512 SUPERFAMILY SSF52540 282 509 8.25E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2154 175f128ba651437675def57aec25cdb5 512 Pfam PF00488 MutS domain V 326 509 3.0E-32 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Acife_2154 175f128ba651437675def57aec25cdb5 512 SUPERFAMILY SSF48334 21 274 3.27E-9 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Acife_2154 175f128ba651437675def57aec25cdb5 512 SMART SM00534 322 507 5.1E-51 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 16 655 3.2E-234 T 12-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 Pfam PF00361 Proton-conducting membrane transporter 142 422 1.5E-91 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 282 304 1.3E-10 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 93 113 1.3E-10 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 436 458 1.3E-10 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 67 91 1.3E-10 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 73 129 1.1E-24 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 116 5.0E-63 T 12-10-2018 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 263 5.0E-63 T 12-10-2018 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 332 344 5.0E-63 T 12-10-2018 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 437 456 5.0E-63 T 12-10-2018 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 166 187 5.0E-63 T 12-10-2018 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 264 290 5.0E-63 T 12-10-2018 Acife_2543 1ba88a281f86055a0e646dd8fddbf2e8 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 119 139 5.0E-63 T 12-10-2018 Acife_2732 844d28d310eecc189d4f50787be3fbfc 377 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 9 202 9.8E-72 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2732 844d28d310eecc189d4f50787be3fbfc 377 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 4 206 37.611 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2732 844d28d310eecc189d4f50787be3fbfc 377 PIRSF PIRSF001259 4 377 3.9E-118 T 12-10-2018 Acife_2732 844d28d310eecc189d4f50787be3fbfc 377 SUPERFAMILY SSF55821 6 205 1.12E-84 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Acife_2732 844d28d310eecc189d4f50787be3fbfc 377 Pfam PF00925 GTP cyclohydrolase II 214 367 1.4E-26 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Acife_2732 844d28d310eecc189d4f50787be3fbfc 377 Gene3D G3DSA:3.90.870.10 1 209 2.3E-86 T 12-10-2018 Acife_2732 844d28d310eecc189d4f50787be3fbfc 377 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 10 201 1.2E-82 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2732 844d28d310eecc189d4f50787be3fbfc 377 SUPERFAMILY SSF142695 208 369 6.67E-36 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Acife_2787 b3dad2b455fe7d52183effaeaaf72df8 159 SUPERFAMILY SSF75217 7 156 6.21E-45 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Acife_2787 b3dad2b455fe7d52183effaeaaf72df8 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 7 156 33.631 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Acife_2787 b3dad2b455fe7d52183effaeaaf72df8 159 Pfam PF00588 SpoU rRNA Methylase family 7 146 1.5E-31 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Acife_2787 b3dad2b455fe7d52183effaeaaf72df8 159 Gene3D G3DSA:3.40.1280.10 3 159 3.0E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Acife_2787 b3dad2b455fe7d52183effaeaaf72df8 159 PIRSF PIRSF029256 6 159 3.4E-65 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Acife_2787 b3dad2b455fe7d52183effaeaaf72df8 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 7 157 1.1E-59 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Acife_0853 b00e83073cb29dcc2f659f94a51c353f 267 SMART SM01232 137 230 8.6E-19 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Acife_0853 b00e83073cb29dcc2f659f94a51c353f 267 SMART SM00898 3 122 2.4E-4 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Acife_0853 b00e83073cb29dcc2f659f94a51c353f 267 SUPERFAMILY SSF57716 220 266 1.8E-7 T 12-10-2018 Acife_0853 b00e83073cb29dcc2f659f94a51c353f 267 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 137 224 3.5E-17 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Acife_0853 b00e83073cb29dcc2f659f94a51c353f 267 Gene3D G3DSA:1.10.8.50 137 267 5.4E-30 T 12-10-2018 Acife_0853 b00e83073cb29dcc2f659f94a51c353f 267 SUPERFAMILY SSF81624 3 142 7.06E-13 T 12-10-2018 IPR035937 MutM-like, N-terminal Acife_0853 b00e83073cb29dcc2f659f94a51c353f 267 SUPERFAMILY SSF46946 136 222 4.97E-17 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Acife_0853 b00e83073cb29dcc2f659f94a51c353f 267 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 4.6E-11 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Acife_0853 b00e83073cb29dcc2f659f94a51c353f 267 Gene3D G3DSA:3.20.190.10 2 129 3.5E-11 T 12-10-2018 IPR035937 MutM-like, N-terminal Acife_0853 b00e83073cb29dcc2f659f94a51c353f 267 Pfam PF06827 Zinc finger found in FPG and IleRS 242 266 4.5E-5 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 SUPERFAMILY SSF52821 3 104 1.23E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 SMART SM00248 166 195 12.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 SMART SM00248 232 258 3500.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 SMART SM00248 133 162 0.1 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 SMART SM00248 199 228 0.021 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 Gene3D G3DSA:1.25.40.20 102 257 8.8E-32 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 SMART SM00450 9 104 1.2E-21 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 Gene3D G3DSA:3.40.250.10 4 101 4.0E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 Pfam PF12796 Ankyrin repeats (3 copies) 118 197 8.3E-9 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 Pfam PF13606 Ankyrin repeat 199 225 8.0E-4 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 Pfam PF00581 Rhodanese-like domain 13 99 4.7E-14 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_1630 f851f7b1fa46a8a33718e3059bbb9a4f 260 SUPERFAMILY SSF48403 55 248 5.91E-31 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Acife_2911 31339f4f5531db2d77d53c09ee6ebc1b 229 Pfam PF00483 Nucleotidyl transferase 8 131 1.1E-15 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Acife_2911 31339f4f5531db2d77d53c09ee6ebc1b 229 Gene3D G3DSA:3.90.550.10 7 226 4.0E-53 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2911 31339f4f5531db2d77d53c09ee6ebc1b 229 SUPERFAMILY SSF53448 7 221 3.38E-49 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0063 30188108b9dc04d679248bff343fd6bc 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 284 2.6E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Acife_0063 30188108b9dc04d679248bff343fd6bc 294 Gene3D G3DSA:1.10.3720.10 92 290 1.2E-23 T 12-10-2018 IPR035906 MetI-like superfamily Acife_0063 30188108b9dc04d679248bff343fd6bc 294 SUPERFAMILY SSF161098 97 276 1.44E-30 T 12-10-2018 IPR035906 MetI-like superfamily Acife_0193 750d1a5d63ffb18c60be3e2d9d391148 321 Pfam PF01544 CorA-like Mg2+ transporter protein 31 317 5.2E-59 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Acife_0193 750d1a5d63ffb18c60be3e2d9d391148 321 Gene3D G3DSA:1.20.58.340 245 321 3.9E-20 T 12-10-2018 Acife_0193 750d1a5d63ffb18c60be3e2d9d391148 321 Gene3D G3DSA:1.20.58.340 130 243 8.2E-29 T 12-10-2018 Acife_0193 750d1a5d63ffb18c60be3e2d9d391148 321 SUPERFAMILY SSF144083 258 318 1.44E-16 T 12-10-2018 Acife_0193 750d1a5d63ffb18c60be3e2d9d391148 321 SUPERFAMILY SSF143865 2 253 4.32E-63 T 12-10-2018 Acife_0193 750d1a5d63ffb18c60be3e2d9d391148 321 Gene3D G3DSA:3.30.460.20 2 129 1.3E-27 T 12-10-2018 Acife_0286 131719468968bc24679cd92c612882ba 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 44 2.8E-9 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Acife_0286 131719468968bc24679cd92c612882ba 82 Gene3D G3DSA:3.40.1620.10 1 41 4.3E-12 T 12-10-2018 Acife_0286 131719468968bc24679cd92c612882ba 82 SUPERFAMILY SSF143120 1 44 1.26E-8 T 12-10-2018 IPR036165 YefM-like superfamily Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.3E-39 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.1E-32 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.1E-32 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.1E-32 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.1E-32 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 Gene3D G3DSA:1.10.150.300 113 200 2.6E-149 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.1E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 SUPERFAMILY SSF81271 279 359 5.67E-36 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 Gene3D G3DSA:3.10.20.30 48 361 2.6E-149 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.1E-154 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 SUPERFAMILY SSF52540 5 301 5.02E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 PIRSF PIRSF006641 1 363 4.7E-149 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 Gene3D G3DSA:3.40.50.300 4 278 2.6E-149 T 12-10-2018 Acife_1250 d95774cb78d732b98d63e2e519b44eba 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 43.57 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Acife_1712 9004f7b704bbfccc8ac0b993b94e8571 373 Pfam PF00487 Fatty acid desaturase 61 315 5.3E-27 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 Acife_1855 8230cfcf07e7e2bc0a31bc2fa688c976 112 Pfam PF06412 Conjugal transfer protein TraD 43 101 7.3E-11 T 12-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 Acife_1392 36b0fa4e4c9b9b421d9c4521e36dba91 291 Pfam PF02153 Prephenate dehydrogenase 21 274 6.2E-57 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Acife_1392 36b0fa4e4c9b9b421d9c4521e36dba91 291 SUPERFAMILY SSF48179 178 284 1.47E-26 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Acife_1392 36b0fa4e4c9b9b421d9c4521e36dba91 291 Gene3D G3DSA:1.10.3660.10 182 285 3.3E-29 T 12-10-2018 Acife_1392 36b0fa4e4c9b9b421d9c4521e36dba91 291 SUPERFAMILY SSF51735 8 174 6.09E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1392 36b0fa4e4c9b9b421d9c4521e36dba91 291 Gene3D G3DSA:3.40.50.720 5 181 5.0E-46 T 12-10-2018 Acife_0212 f4e45b671ab7d0fcc56437d171959db4 164 Pfam PF01322 Cytochrome C' 38 158 2.8E-22 T 12-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 Acife_0212 f4e45b671ab7d0fcc56437d171959db4 164 SUPERFAMILY SSF47175 33 158 1.91E-21 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 Acife_0212 f4e45b671ab7d0fcc56437d171959db4 164 Gene3D G3DSA:1.20.120.10 34 159 6.9E-26 T 12-10-2018 Acife_2033 73c8ce08f1458605188891413d209805 217 Pfam PF01300 Telomere recombination 22 198 1.0E-41 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 Acife_2033 73c8ce08f1458605188891413d209805 217 SUPERFAMILY SSF55821 1 202 1.4E-56 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Acife_2033 73c8ce08f1458605188891413d209805 217 Gene3D G3DSA:3.90.870.10 2 203 5.6E-59 T 12-10-2018 Acife_2033 73c8ce08f1458605188891413d209805 217 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 200 2.1E-54 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 Acife_3187 2aa06928e7998182ef467727f6df0164 614 Gene3D G3DSA:3.40.50.10490 253 613 1.4E-136 T 12-10-2018 Acife_3187 2aa06928e7998182ef467727f6df0164 614 Gene3D G3DSA:3.60.20.10 2 244 1.5E-74 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Acife_3187 2aa06928e7998182ef467727f6df0164 614 Gene3D G3DSA:3.40.50.10490 452 599 1.4E-136 T 12-10-2018 Acife_3187 2aa06928e7998182ef467727f6df0164 614 Pfam PF01380 SIS domain 295 422 1.4E-24 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Acife_3187 2aa06928e7998182ef467727f6df0164 614 Pfam PF01380 SIS domain 468 596 1.1E-27 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Acife_3187 2aa06928e7998182ef467727f6df0164 614 Pfam PF13522 Glutamine amidotransferase domain 68 197 8.0E-25 T 12-10-2018 Acife_3187 2aa06928e7998182ef467727f6df0164 614 SUPERFAMILY SSF56235 2 237 5.32E-68 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Acife_3187 2aa06928e7998182ef467727f6df0164 614 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 614 39.352 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Acife_3187 2aa06928e7998182ef467727f6df0164 614 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 614 7.3E-240 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Acife_3187 2aa06928e7998182ef467727f6df0164 614 SUPERFAMILY SSF53697 249 614 9.68E-108 T 12-10-2018 Acife_1393 53007dc0e2b164fd9e94817ba21ba8d4 433 PIRSF PIRSF000505 1 429 6.0E-112 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Acife_1393 53007dc0e2b164fd9e94817ba21ba8d4 433 Gene3D G3DSA:3.65.10.10 22 229 1.0E-150 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Acife_1393 53007dc0e2b164fd9e94817ba21ba8d4 433 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 427 31.676 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Acife_1393 53007dc0e2b164fd9e94817ba21ba8d4 433 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 418 6.2E-117 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Acife_1393 53007dc0e2b164fd9e94817ba21ba8d4 433 Gene3D G3DSA:3.65.10.10 14 417 1.0E-150 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Acife_1393 53007dc0e2b164fd9e94817ba21ba8d4 433 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Acife_1393 53007dc0e2b164fd9e94817ba21ba8d4 433 SUPERFAMILY SSF55205 4 425 1.68E-124 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Acife_1393 53007dc0e2b164fd9e94817ba21ba8d4 433 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Acife_1393 53007dc0e2b164fd9e94817ba21ba8d4 433 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 423 4.3E-120 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Acife_3204 28e352a9b93645e3b35850dd2989b2f6 180 SMART SM00852 19 163 4.9E-27 T 12-10-2018 IPR001453 MoaB/Mog domain Acife_3204 28e352a9b93645e3b35850dd2989b2f6 180 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 17 158 2.5E-34 T 12-10-2018 IPR001453 MoaB/Mog domain Acife_3204 28e352a9b93645e3b35850dd2989b2f6 180 Pfam PF00994 Probable molybdopterin binding domain 19 160 5.6E-34 T 12-10-2018 IPR001453 MoaB/Mog domain Acife_3204 28e352a9b93645e3b35850dd2989b2f6 180 Gene3D G3DSA:3.40.980.10 7 176 3.0E-49 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Acife_3204 28e352a9b93645e3b35850dd2989b2f6 180 SUPERFAMILY SSF53218 11 168 2.36E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Acife_3204 28e352a9b93645e3b35850dd2989b2f6 180 PIRSF PIRSF006443 2 171 8.5E-61 T 12-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 Acife_3204 28e352a9b93645e3b35850dd2989b2f6 180 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 13 173 4.4E-77 T 12-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 129 138 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 28 579 1.6E-132 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 134 150 1.0E-19 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 328 349 1.0E-19 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 134 1.0E-19 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 158 171 1.0E-19 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 579 25.922 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 6 90 2.7E-20 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 Gene3D G3DSA:3.40.50.620 119 453 3.1E-156 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 SUPERFAMILY SSF55190 9 110 3.79E-22 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 Pfam PF00750 tRNA synthetases class I (R) 111 178 2.0E-7 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 Pfam PF00750 tRNA synthetases class I (R) 292 426 5.0E-8 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 SUPERFAMILY SSF47323 454 579 1.05E-37 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 Pfam PF05746 DALR anticodon binding domain 459 579 2.1E-37 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 Gene3D G3DSA:1.10.730.10 454 579 3.1E-156 T 12-10-2018 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 SMART SM01016 3 90 5.1E-29 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 SUPERFAMILY SSF52374 115 470 5.32E-86 T 12-10-2018 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 Gene3D G3DSA:3.30.1360.70 1 110 4.1E-22 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Acife_2874 97f00a938fe8197de8814065c5d9ab0d 579 SMART SM00836 459 579 2.4E-57 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Acife_0927 8339eea277e656509538011fd3effe81 414 Pfam PF02687 FtsX-like permease family 301 407 3.7E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Acife_0927 8339eea277e656509538011fd3effe81 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 414 3.8E-148 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Acife_0927 8339eea277e656509538011fd3effe81 414 Pfam PF12704 MacB-like periplasmic core domain 26 243 1.0E-16 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Acife_1120 f86823a82cb0f39c531eb52e0bdedbb1 263 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 16 243 4.5E-11 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Acife_1120 f86823a82cb0f39c531eb52e0bdedbb1 263 SUPERFAMILY SSF56219 5 254 5.23E-33 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Acife_1120 f86823a82cb0f39c531eb52e0bdedbb1 263 Gene3D G3DSA:3.60.10.10 11 257 2.5E-38 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Acife_1949 edb5ab44a84af75c851042fb409f7cb5 635 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 178 197 9.3E-13 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_1949 edb5ab44a84af75c851042fb409f7cb5 635 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 429 443 9.3E-13 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_1949 edb5ab44a84af75c851042fb409f7cb5 635 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 115 127 9.3E-13 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_1949 edb5ab44a84af75c851042fb409f7cb5 635 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 118 124 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Acife_1949 edb5ab44a84af75c851042fb409f7cb5 635 Pfam PF01555 DNA methylase 115 449 8.5E-34 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Acife_1949 edb5ab44a84af75c851042fb409f7cb5 635 PIRSF PIRSF015855 1 635 2.3E-158 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_1949 edb5ab44a84af75c851042fb409f7cb5 635 SUPERFAMILY SSF53335 82 465 1.39E-54 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2750 51d10a14555a6ccab5f4509e3d250f93 115 Gene3D G3DSA:3.30.1450.10 29 110 2.4E-21 T 12-10-2018 IPR037873 BamE-like Acife_2750 51d10a14555a6ccab5f4509e3d250f93 115 Pfam PF04355 SmpA / OmlA family 30 99 4.4E-18 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 Acife_2750 51d10a14555a6ccab5f4509e3d250f93 115 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 109 21.742 T 12-10-2018 IPR026592 Outer membrane protein assembly factor BamE Acife_2228 746d38d93cd19343c2cf748632b08a98 160 Gene3D G3DSA:3.40.30.10 13 149 2.5E-25 T 12-10-2018 Acife_2228 746d38d93cd19343c2cf748632b08a98 160 Pfam PF08534 Redoxin 34 145 9.6E-13 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Acife_2228 746d38d93cd19343c2cf748632b08a98 160 SUPERFAMILY SSF52833 2 150 2.76E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2824 c2240066105bdfae6e64e40317b317c4 422 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 377 8.2E-144 T 12-10-2018 IPR020823 Cell division protein FtsA Acife_2824 c2240066105bdfae6e64e40317b317c4 422 Gene3D G3DSA:3.30.420.40 196 351 2.0E-126 T 12-10-2018 Acife_2824 c2240066105bdfae6e64e40317b317c4 422 SUPERFAMILY SSF53067 198 377 2.1E-46 T 12-10-2018 Acife_2824 c2240066105bdfae6e64e40317b317c4 422 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 421 31.367 T 12-10-2018 IPR020823 Cell division protein FtsA Acife_2824 c2240066105bdfae6e64e40317b317c4 422 SUPERFAMILY SSF53067 7 221 1.01E-59 T 12-10-2018 Acife_2824 c2240066105bdfae6e64e40317b317c4 422 SMART SM00842 9 195 2.6E-100 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Acife_2824 c2240066105bdfae6e64e40317b317c4 422 Gene3D G3DSA:3.30.420.40 12 370 2.0E-126 T 12-10-2018 Acife_2824 c2240066105bdfae6e64e40317b317c4 422 Gene3D G3DSA:3.30.1490.110 86 168 2.0E-126 T 12-10-2018 Acife_2824 c2240066105bdfae6e64e40317b317c4 422 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 6.2E-32 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Acife_2824 c2240066105bdfae6e64e40317b317c4 422 Gene3D G3DSA:3.90.640.10 234 299 2.0E-126 T 12-10-2018 Acife_2824 c2240066105bdfae6e64e40317b317c4 422 Pfam PF14450 Cell division protein FtsA 10 184 2.1E-12 T 12-10-2018 Acife_2824 c2240066105bdfae6e64e40317b317c4 422 Pfam PF14450 Cell division protein FtsA 206 373 2.3E-24 T 12-10-2018 Acife_2824 c2240066105bdfae6e64e40317b317c4 422 PIRSF PIRSF003101 1 421 4.1E-155 T 12-10-2018 IPR020823 Cell division protein FtsA Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 Gene3D G3DSA:3.40.190.10 94 263 4.3E-56 T 12-10-2018 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 Pfam PF01842 ACT domain 277 340 1.0E-7 T 12-10-2018 IPR002912 ACT domain Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 SUPERFAMILY SSF53850 91 272 3.58E-55 T 12-10-2018 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 303 310 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 Pfam PF00800 Prephenate dehydratase 92 265 4.5E-57 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 Gene3D G3DSA:1.20.59.10 8 92 1.9E-26 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 241 263 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 PIRSF PIRSF001500 1 358 2.1E-121 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 SUPERFAMILY SSF48600 5 93 6.04E-18 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 Gene3D G3DSA:3.40.190.10 172 255 4.3E-56 T 12-10-2018 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 Pfam PF01817 Chorismate mutase type II 10 88 1.6E-20 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 TIGRFAM TIGR01807 CM_P2: chorismate mutase 6 80 1.7E-23 T 12-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 SUPERFAMILY SSF55021 260 355 1.09E-23 T 12-10-2018 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 Gene3D G3DSA:3.30.70.260 267 357 3.8E-27 T 12-10-2018 Acife_1389 c71e0d32d5613211765b9fcc13cc3ef2 358 SMART SM00830 10 90 9.5E-23 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 542 39.506 T 12-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 Pfam PF09334 tRNA synthetases class I (M) 6 392 1.1E-150 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 SUPERFAMILY SSF50249 567 671 6.12E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 SUPERFAMILY SSF52374 3 381 1.05E-96 T 12-10-2018 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 Gene3D G3DSA:1.10.730.10 385 523 4.9E-32 T 12-10-2018 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 550 672 1.4E-37 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 Pfam PF01588 Putative tRNA binding domain 577 669 5.0E-21 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 SUPERFAMILY SSF47323 386 542 1.59E-37 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 Gene3D G3DSA:2.20.28.20 139 173 1.1E-149 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 SUPERFAMILY SSF57770 139 173 3.27E-12 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 Gene3D G3DSA:2.40.50.140 561 672 7.4E-32 T 12-10-2018 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 Gene3D G3DSA:3.40.50.620 6 379 1.1E-149 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 532 4.4E-167 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 8.6E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 8.6E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 8.6E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 8.6E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 PRINTS PR01041 Methionyl-tRNA synthetase signature 287 302 8.6E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 PRINTS PR01041 Methionyl-tRNA synthetase signature 380 391 8.6E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Acife_0587 fb0e162a2426ac1b216db8b2c254ad30 672 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_1306 f4f23b7bc63647068ef7c57e2e55a28b 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 224 259 2.7E-8 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_1306 f4f23b7bc63647068ef7c57e2e55a28b 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 142 181 6.5E-6 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_1306 f4f23b7bc63647068ef7c57e2e55a28b 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 260 294 4.7E-4 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_1306 f4f23b7bc63647068ef7c57e2e55a28b 353 SUPERFAMILY SSF51161 36 317 1.43E-73 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Acife_1306 f4f23b7bc63647068ef7c57e2e55a28b 353 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 328 34.941 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Acife_1306 f4f23b7bc63647068ef7c57e2e55a28b 353 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 10 331 2.1E-108 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Acife_1306 f4f23b7bc63647068ef7c57e2e55a28b 353 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 26 90 2.3E-16 T 12-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 Acife_1306 f4f23b7bc63647068ef7c57e2e55a28b 353 Gene3D G3DSA:3.40.1390.10 1 99 2.8E-23 T 12-10-2018 Acife_1306 f4f23b7bc63647068ef7c57e2e55a28b 353 Gene3D G3DSA:2.160.10.10 102 310 1.5E-61 T 12-10-2018 Acife_2273 a0cd8c37cd754ad7b5c929b443a8b4df 160 SUPERFAMILY SSF75169 42 159 6.08E-21 T 12-10-2018 IPR027396 DsrEFH-like Acife_2273 a0cd8c37cd754ad7b5c929b443a8b4df 160 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 8 33 2.9E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Acife_2273 a0cd8c37cd754ad7b5c929b443a8b4df 160 Pfam PF02635 DsrE/DsrF-like family 63 159 5.7E-12 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Acife_2273 a0cd8c37cd754ad7b5c929b443a8b4df 160 Gene3D G3DSA:3.40.1260.10 40 159 7.9E-22 T 12-10-2018 IPR027396 DsrEFH-like Acife_1674 b548be90e031ec57a80536dc8c0f5aaa 473 Pfam PF07690 Major Facilitator Superfamily 45 418 3.7E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_1674 b548be90e031ec57a80536dc8c0f5aaa 473 SUPERFAMILY SSF103473 36 448 3.4E-33 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_0175 e5138096f8d36d06e5b7d6f68c07c36c 338 Gene3D G3DSA:1.20.970.10 1 69 9.3E-21 T 12-10-2018 Acife_0175 e5138096f8d36d06e5b7d6f68c07c36c 338 SUPERFAMILY SSF47648 4 68 9.68E-18 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Acife_0175 e5138096f8d36d06e5b7d6f68c07c36c 338 SUPERFAMILY SSF52418 74 331 1.44E-87 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Acife_0175 e5138096f8d36d06e5b7d6f68c07c36c 338 Gene3D G3DSA:3.40.1030.10 71 337 2.5E-101 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Acife_0175 e5138096f8d36d06e5b7d6f68c07c36c 338 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 64 3.6E-17 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Acife_0175 e5138096f8d36d06e5b7d6f68c07c36c 338 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 334 35.733 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Acife_0175 e5138096f8d36d06e5b7d6f68c07c36c 338 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 331 2.0E-115 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Acife_0175 e5138096f8d36d06e5b7d6f68c07c36c 338 Pfam PF00591 Glycosyl transferase family, a/b domain 75 324 3.9E-86 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Acife_3203 f08a442065c866f92239c40e312cadb5 179 Pfam PF13649 Methyltransferase domain 42 126 1.5E-9 T 12-10-2018 Acife_3203 f08a442065c866f92239c40e312cadb5 179 Gene3D G3DSA:3.40.50.150 9 175 8.4E-27 T 12-10-2018 Acife_3203 f08a442065c866f92239c40e312cadb5 179 SUPERFAMILY SSF53335 9 160 5.78E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_1089 b6b32ce2ff44ce0dc883898e6821c9ed 829 Pfam PF17092 Penicillin-binding protein OB-like domain 342 468 3.6E-17 T 12-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_1089 b6b32ce2ff44ce0dc883898e6821c9ed 829 Pfam PF00912 Transglycosylase 71 249 1.2E-51 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_1089 b6b32ce2ff44ce0dc883898e6821c9ed 829 Gene3D G3DSA:3.40.710.10 453 790 1.9E-100 T 12-10-2018 Acife_1089 b6b32ce2ff44ce0dc883898e6821c9ed 829 Gene3D G3DSA:3.40.710.10 269 342 1.9E-7 T 12-10-2018 Acife_1089 b6b32ce2ff44ce0dc883898e6821c9ed 829 Pfam PF00905 Penicillin binding protein transpeptidase domain 470 735 2.5E-23 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Acife_1089 b6b32ce2ff44ce0dc883898e6821c9ed 829 Gene3D G3DSA:2.40.50.140 343 439 3.4E-7 T 12-10-2018 Acife_1089 b6b32ce2ff44ce0dc883898e6821c9ed 829 SUPERFAMILY SSF56601 231 782 1.87E-102 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Acife_1089 b6b32ce2ff44ce0dc883898e6821c9ed 829 Gene3D G3DSA:1.10.3810.10 65 265 9.1E-63 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_1089 b6b32ce2ff44ce0dc883898e6821c9ed 829 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 82 764 3.2E-160 T 12-10-2018 Acife_1089 b6b32ce2ff44ce0dc883898e6821c9ed 829 SUPERFAMILY SSF53955 59 274 1.27E-63 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Acife_2769 e030934c53265f39e9d6a2dd3a1190ad 189 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 77 180 8.1E-16 T 12-10-2018 IPR018550 Lipid A 3-O-deacylase-related Acife_2769 e030934c53265f39e9d6a2dd3a1190ad 189 Gene3D G3DSA:2.40.160.20 100 182 3.4E-9 T 12-10-2018 Acife_1158 353f773023771f459eee26814859a8da 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 329 2.4E-131 T 12-10-2018 IPR016040 NAD(P)-binding domain Acife_1158 353f773023771f459eee26814859a8da 339 Gene3D G3DSA:3.40.50.720 5 320 1.1E-147 T 12-10-2018 Acife_1158 353f773023771f459eee26814859a8da 339 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 335 1.5E-134 T 12-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Acife_1158 353f773023771f459eee26814859a8da 339 SUPERFAMILY SSF51735 3 334 2.03E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1158 353f773023771f459eee26814859a8da 339 Gene3D G3DSA:3.90.25.10 186 334 1.1E-147 T 12-10-2018 Acife_1158 353f773023771f459eee26814859a8da 339 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 339 51.62 T 12-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Acife_2538 ac1534a2c07d143529650b45c6ca8405 166 Gene3D G3DSA:3.10.20.80 1 71 1.8E-29 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Acife_2538 ac1534a2c07d143529650b45c6ca8405 166 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 3 71 1.5E-28 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Acife_2538 ac1534a2c07d143529650b45c6ca8405 166 SUPERFAMILY SSF54364 2 74 4.58E-27 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Acife_2538 ac1534a2c07d143529650b45c6ca8405 166 Gene3D G3DSA:3.30.110.10 72 166 1.8E-36 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Acife_2538 ac1534a2c07d143529650b45c6ca8405 166 ProSitePatterns PS00938 Initiation factor 3 signature. 54 67 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Acife_2538 ac1534a2c07d143529650b45c6ca8405 166 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 79 163 6.8E-37 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Acife_2538 ac1534a2c07d143529650b45c6ca8405 166 SUPERFAMILY SSF55200 80 165 9.55E-33 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Acife_2538 ac1534a2c07d143529650b45c6ca8405 166 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 166 2.5E-65 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Acife_2538 ac1534a2c07d143529650b45c6ca8405 166 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 166 29.225 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Acife_1334 ecc6a0927b1e8d4468022b1c5555d25d 99 Pfam PF01022 Bacterial regulatory protein, arsR family 24 67 1.7E-4 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1334 ecc6a0927b1e8d4468022b1c5555d25d 99 SUPERFAMILY SSF46785 10 94 1.64E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1334 ecc6a0927b1e8d4468022b1c5555d25d 99 SMART SM00418 16 94 5.2E-6 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1334 ecc6a0927b1e8d4468022b1c5555d25d 99 Gene3D G3DSA:1.10.10.10 8 99 2.1E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1539 6b573e6ab2db5a3c68e7a59f35bd9aac 264 Gene3D G3DSA:1.10.3290.10 29 249 1.1E-21 T 12-10-2018 IPR036597 Fido-like domain superfamily Acife_1539 6b573e6ab2db5a3c68e7a59f35bd9aac 264 SUPERFAMILY SSF140931 72 244 1.57E-9 T 12-10-2018 IPR036597 Fido-like domain superfamily Acife_1539 6b573e6ab2db5a3c68e7a59f35bd9aac 264 Pfam PF02661 Fic/DOC family 161 202 4.4E-5 T 12-10-2018 IPR003812 Fido domain Acife_2046 b135e57a9ef8655ba22c14edd882dc23 261 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 6 259 6.4E-87 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Acife_2046 b135e57a9ef8655ba22c14edd882dc23 261 Pfam PF02548 Ketopantoate hydroxymethyltransferase 5 256 3.0E-96 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Acife_2046 b135e57a9ef8655ba22c14edd882dc23 261 PIRSF PIRSF000388 1 261 3.1E-94 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Acife_2046 b135e57a9ef8655ba22c14edd882dc23 261 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 261 35.47 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Acife_2046 b135e57a9ef8655ba22c14edd882dc23 261 Gene3D G3DSA:3.20.20.60 3 261 5.2E-94 T 12-10-2018 Acife_2046 b135e57a9ef8655ba22c14edd882dc23 261 SUPERFAMILY SSF51621 5 259 4.93E-89 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Acife_2846 3d18de894751baa56814c1154c696ced 397 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site Acife_2846 3d18de894751baa56814c1154c696ced 397 SMART SM00825 Beta-ketoacyl synthase 26 397 3.2E-7 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Acife_2846 3d18de894751baa56814c1154c696ced 397 SUPERFAMILY SSF53901 208 395 2.74E-47 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_2846 3d18de894751baa56814c1154c696ced 397 Gene3D G3DSA:3.40.47.10 6 245 1.6E-31 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_2846 3d18de894751baa56814c1154c696ced 397 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 247 350 1.3E-29 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Acife_2846 3d18de894751baa56814c1154c696ced 397 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 83 234 7.0E-21 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Acife_2846 3d18de894751baa56814c1154c696ced 397 Gene3D G3DSA:3.40.47.10 249 392 1.8E-42 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_2846 3d18de894751baa56814c1154c696ced 397 SUPERFAMILY SSF53901 5 235 1.12E-34 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_2219 0ae2025aa4ed1cc1184cd9799908df7e 282 Pfam PF03734 L,D-transpeptidase catalytic domain 68 226 2.3E-19 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Acife_2219 0ae2025aa4ed1cc1184cd9799908df7e 282 SUPERFAMILY SSF141523 63 227 3.14E-20 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Acife_2219 0ae2025aa4ed1cc1184cd9799908df7e 282 Gene3D G3DSA:2.40.440.10 37 272 2.4E-23 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 11 727 8.1E-232 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 PRINTS PR01439 Cellulose synthase subunit A signature 413 439 8.0E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 PRINTS PR01439 Cellulose synthase subunit A signature 554 575 8.0E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 PRINTS PR01439 Cellulose synthase subunit A signature 99 124 8.0E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 PRINTS PR01439 Cellulose synthase subunit A signature 71 91 8.0E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 PRINTS PR01439 Cellulose synthase subunit A signature 154 173 8.0E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 PRINTS PR01439 Cellulose synthase subunit A signature 482 501 8.0E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 SUPERFAMILY SSF141371 578 697 5.89E-10 T 12-10-2018 Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 Pfam PF07238 PilZ domain 581 686 1.1E-10 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 Gene3D G3DSA:3.90.550.10 134 373 9.9E-83 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 SUPERFAMILY SSF53448 147 450 1.85E-45 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 Gene3D G3DSA:2.40.10.220 577 693 9.8E-10 T 12-10-2018 Acife_1594 ee0324cc3d06f66d3d4ef290d6bcc368 762 Pfam PF00535 Glycosyl transferase family 2 148 335 4.4E-33 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_2225 820551b45f20b37b336b712ef937be20 212 SMART SM00072 7 190 1.5E-62 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Acife_2225 820551b45f20b37b336b712ef937be20 212 Gene3D G3DSA:3.40.50.300 91 208 1.3E-34 T 12-10-2018 Acife_2225 820551b45f20b37b336b712ef937be20 212 Hamap MF_00328 Guanylate kinase [gmk]. 6 190 35.515 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Acife_2225 820551b45f20b37b336b712ef937be20 212 Gene3D G3DSA:3.40.50.300 2 41 1.3E-5 T 12-10-2018 Acife_2225 820551b45f20b37b336b712ef937be20 212 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 9 187 5.5E-70 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Acife_2225 820551b45f20b37b336b712ef937be20 212 ProSitePatterns PS00856 Guanylate kinase-like signature. 42 59 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Acife_2225 820551b45f20b37b336b712ef937be20 212 SUPERFAMILY SSF52540 7 192 4.31E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2225 820551b45f20b37b336b712ef937be20 212 Gene3D G3DSA:3.30.63.10 42 90 9.0E-22 T 12-10-2018 Acife_2225 820551b45f20b37b336b712ef937be20 212 Pfam PF00625 Guanylate kinase 11 188 2.2E-49 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Acife_2604 9dc2b34641e4e10f312a4460dd84f532 602 Gene3D G3DSA:1.20.1530.20 6 399 5.2E-18 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Acife_2604 9dc2b34641e4e10f312a4460dd84f532 602 Pfam PF02254 TrkA-N domain 405 493 8.9E-7 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Acife_2604 9dc2b34641e4e10f312a4460dd84f532 602 SUPERFAMILY SSF51735 404 496 5.91E-7 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2604 9dc2b34641e4e10f312a4460dd84f532 602 Pfam PF00999 Sodium/hydrogen exchanger family 13 392 2.9E-41 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Acife_2604 9dc2b34641e4e10f312a4460dd84f532 602 Gene3D G3DSA:3.40.50.720 400 504 1.2E-7 T 12-10-2018 Acife_2943 cdbf11e25fa9b2823d19d60871fe7b72 185 SUPERFAMILY SSF143456 5 185 1.3E-61 T 12-10-2018 Acife_2943 cdbf11e25fa9b2823d19d60871fe7b72 185 Pfam PF02622 Uncharacterized ACR, COG1678 15 172 9.8E-47 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 Acife_2943 cdbf11e25fa9b2823d19d60871fe7b72 185 Gene3D G3DSA:3.40.1740.10 1 185 8.4E-67 T 12-10-2018 Acife_2943 cdbf11e25fa9b2823d19d60871fe7b72 185 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 185 35.446 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 Acife_0287 8b12ef86f0329715b3e9575e39f95e40 126 Gene3D G3DSA:3.40.50.1010 1 117 6.1E-10 T 12-10-2018 Acife_0287 8b12ef86f0329715b3e9575e39f95e40 126 Pfam PF01850 PIN domain 2 113 1.4E-9 T 12-10-2018 IPR002716 PIN domain Acife_0287 8b12ef86f0329715b3e9575e39f95e40 126 SUPERFAMILY SSF88723 2 117 7.57E-18 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_1467 9301db0870091a9bb743fd0d148fcc8e 320 SMART SM00155 236 262 18.0 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Acife_1467 9301db0870091a9bb743fd0d148fcc8e 320 SMART SM00155 93 119 5.5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Acife_1467 9301db0870091a9bb743fd0d148fcc8e 320 SUPERFAMILY SSF56024 3 150 6.28E-25 T 12-10-2018 Acife_1467 9301db0870091a9bb743fd0d148fcc8e 320 SUPERFAMILY SSF56024 194 292 2.92E-13 T 12-10-2018 Acife_1467 9301db0870091a9bb743fd0d148fcc8e 320 Pfam PF13091 PLD-like domain 194 289 4.6E-12 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Acife_1467 9301db0870091a9bb743fd0d148fcc8e 320 Pfam PF13091 PLD-like domain 13 147 3.8E-20 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Acife_1467 9301db0870091a9bb743fd0d148fcc8e 320 Gene3D G3DSA:3.30.870.10 3 151 7.2E-28 T 12-10-2018 Acife_1467 9301db0870091a9bb743fd0d148fcc8e 320 Gene3D G3DSA:3.30.870.10 179 291 1.1E-14 T 12-10-2018 Acife_1474 eeb71771b1d1147fe951cecb7cca34b4 433 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 39 428 49.913 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_1474 eeb71771b1d1147fe951cecb7cca34b4 433 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 90 415 5.6E-47 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Acife_1474 eeb71771b1d1147fe951cecb7cca34b4 433 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 118 132 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_1474 eeb71771b1d1147fe951cecb7cca34b4 433 SUPERFAMILY SSF53686 43 425 8.91E-142 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Acife_1474 eeb71771b1d1147fe951cecb7cca34b4 433 Gene3D G3DSA:3.40.50.1100 91 421 1.5E-179 T 12-10-2018 Acife_1474 eeb71771b1d1147fe951cecb7cca34b4 433 PIRSF PIRSF001413 32 432 1.2E-158 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_1474 eeb71771b1d1147fe951cecb7cca34b4 433 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 44 426 3.6E-184 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_1474 eeb71771b1d1147fe951cecb7cca34b4 433 Gene3D G3DSA:3.40.50.1100 47 243 1.5E-179 T 12-10-2018 Acife_2880 17e23b4c17c2af214bd1888aae00322d 87 Gene3D G3DSA:3.10.290.10 5 85 6.8E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Acife_2880 17e23b4c17c2af214bd1888aae00322d 87 SUPERFAMILY SSF55174 5 75 8.37E-18 T 12-10-2018 Acife_2880 17e23b4c17c2af214bd1888aae00322d 87 SMART SM00363 5 72 3.8E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2880 17e23b4c17c2af214bd1888aae00322d 87 PIRSF PIRSF038881 5 85 1.2E-21 T 12-10-2018 IPR025490 RNA-binding protein, HP1423 type Acife_2880 17e23b4c17c2af214bd1888aae00322d 87 Pfam PF01479 S4 domain 6 51 2.9E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_0924 042bae46c9aaf950f482dcf4bf23a41b 157 SUPERFAMILY SSF111126 21 154 3.66E-25 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily Acife_0924 042bae46c9aaf950f482dcf4bf23a41b 157 Pfam PF02830 V4R domain 95 154 5.6E-12 T 12-10-2018 IPR004096 4-vinyl reductase, 4VR Acife_0924 042bae46c9aaf950f482dcf4bf23a41b 157 SMART SM00989 93 156 1.6E-9 T 12-10-2018 IPR004096 4-vinyl reductase, 4VR Acife_0924 042bae46c9aaf950f482dcf4bf23a41b 157 Gene3D G3DSA:3.30.1380.20 3 157 4.3E-31 T 12-10-2018 Acife_1598 7c08bdf832c558f74423ac966fcd885a 417 SUPERFAMILY SSF48208 51 402 8.84E-82 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Acife_1598 7c08bdf832c558f74423ac966fcd885a 417 Pfam PF01270 Glycosyl hydrolases family 8 57 395 1.5E-58 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1598 7c08bdf832c558f74423ac966fcd885a 417 Gene3D G3DSA:1.50.10.10 64 412 2.6E-118 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Acife_1598 7c08bdf832c558f74423ac966fcd885a 417 PRINTS PR00735 Glycosyl hydrolase family 8 signature 154 172 5.1E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1598 7c08bdf832c558f74423ac966fcd885a 417 PRINTS PR00735 Glycosyl hydrolase family 8 signature 282 291 5.1E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1598 7c08bdf832c558f74423ac966fcd885a 417 PRINTS PR00735 Glycosyl hydrolase family 8 signature 92 105 5.1E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1598 7c08bdf832c558f74423ac966fcd885a 417 PRINTS PR00735 Glycosyl hydrolase family 8 signature 220 237 5.1E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1598 7c08bdf832c558f74423ac966fcd885a 417 PRINTS PR00735 Glycosyl hydrolase family 8 signature 258 269 5.1E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1598 7c08bdf832c558f74423ac966fcd885a 417 PRINTS PR00735 Glycosyl hydrolase family 8 signature 383 397 5.1E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_2005 77fbfc831ea30c679918d631c7a34509 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 274 3.7E-146 T 12-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Acife_2005 77fbfc831ea30c679918d631c7a34509 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 167 3.2E-4 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_2005 77fbfc831ea30c679918d631c7a34509 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 273 56.934 T 12-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Acife_2005 77fbfc831ea30c679918d631c7a34509 274 SUPERFAMILY SSF51161 4 257 1.34E-75 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Acife_2005 77fbfc831ea30c679918d631c7a34509 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Acife_2005 77fbfc831ea30c679918d631c7a34509 274 Gene3D G3DSA:2.160.10.10 88 258 2.5E-57 T 12-10-2018 Acife_2005 77fbfc831ea30c679918d631c7a34509 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 176 210 3.7E-12 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_2005 77fbfc831ea30c679918d631c7a34509 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 70 5.6E-26 T 12-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 Acife_2005 77fbfc831ea30c679918d631c7a34509 274 Gene3D G3DSA:1.10.166.10 2 71 2.5E-30 T 12-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 Acife_1990 28f203b93e651b50421dafd053d82336 831 Gene3D G3DSA:3.40.50.300 359 623 1.6E-43 T 12-10-2018 Acife_1990 28f203b93e651b50421dafd053d82336 831 SUPERFAMILY SSF52540 132 626 1.01E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1990 28f203b93e651b50421dafd053d82336 831 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 138 627 1.4E-103 T 12-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Acife_2236 363aa70d63913e6181aae46b527f9691 575 SMART SM00382 350 532 2.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2236 363aa70d63913e6181aae46b527f9691 575 SMART SM00382 34 215 4.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2236 363aa70d63913e6181aae46b527f9691 575 SUPERFAMILY SSF52540 6 228 9.38E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2236 363aa70d63913e6181aae46b527f9691 575 Gene3D G3DSA:3.40.50.300 2 233 4.1E-62 T 12-10-2018 Acife_2236 363aa70d63913e6181aae46b527f9691 575 Gene3D G3DSA:3.40.50.300 317 557 6.9E-64 T 12-10-2018 Acife_2236 363aa70d63913e6181aae46b527f9691 575 SUPERFAMILY SSF52540 308 547 6.07E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2236 363aa70d63913e6181aae46b527f9691 575 Pfam PF00005 ABC transporter 343 485 2.9E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_2236 363aa70d63913e6181aae46b527f9691 575 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_2236 363aa70d63913e6181aae46b527f9691 575 Pfam PF00005 ABC transporter 25 168 1.8E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_1143 d1fcfec7db76280e2dba54acc64f412d 130 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 8 125 1.4E-35 T 12-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 Acife_1143 d1fcfec7db76280e2dba54acc64f412d 130 SUPERFAMILY SSF81593 7 123 3.77E-31 T 12-10-2018 Acife_1143 d1fcfec7db76280e2dba54acc64f412d 130 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 10 125 3.5E-25 T 12-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 Acife_1143 d1fcfec7db76280e2dba54acc64f412d 130 Gene3D G3DSA:1.20.120.330 1 129 4.0E-39 T 12-10-2018 Acife_0137 a8d4770bbefd8bbde34288747b326bfd 331 Pfam PF13103 TonB C terminal 242 315 1.8E-14 T 12-10-2018 Acife_0137 a8d4770bbefd8bbde34288747b326bfd 331 SUPERFAMILY SSF74653 242 325 3.79E-10 T 12-10-2018 Acife_0137 a8d4770bbefd8bbde34288747b326bfd 331 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 266 314 8.8E-8 T 12-10-2018 IPR006260 TonB/TolA, C-terminal Acife_0137 a8d4770bbefd8bbde34288747b326bfd 331 Gene3D G3DSA:3.30.1150.10 213 330 3.5E-21 T 12-10-2018 Acife_0137 a8d4770bbefd8bbde34288747b326bfd 331 TIGRFAM TIGR02794 tolA_full: protein TolA 8 324 1.7E-29 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 Acife_2231 1c0b762c84fa031949010c807f838056 118 SMART SM00961 18 115 8.7E-48 T 12-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2231 1c0b762c84fa031949010c807f838056 118 SUPERFAMILY SSF55239 12 115 1.05E-41 T 12-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2231 1c0b762c84fa031949010c807f838056 118 Gene3D G3DSA:3.30.190.10 1 116 6.2E-44 T 12-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2231 1c0b762c84fa031949010c807f838056 118 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 19 114 2.1E-38 T 12-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2688 d4edb07b7350366f7eae5df0e1b484ea 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 7.2E-26 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Acife_2688 d4edb07b7350366f7eae5df0e1b484ea 72 Gene3D G3DSA:2.40.50.140 1 72 1.3E-35 T 12-10-2018 Acife_2688 d4edb07b7350366f7eae5df0e1b484ea 72 SMART SM00316 4 72 0.0011 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_2688 d4edb07b7350366f7eae5df0e1b484ea 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 6.2E-37 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Acife_2688 d4edb07b7350366f7eae5df0e1b484ea 72 SUPERFAMILY SSF50249 1 70 6.0E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_2688 d4edb07b7350366f7eae5df0e1b484ea 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.092 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Acife_1245 e6fb8dbae7403fbbf8c8a31a619a0641 484 Pfam PF00361 Proton-conducting membrane transporter 124 415 2.2E-48 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1245 e6fb8dbae7403fbbf8c8a31a619a0641 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 1.9E-12 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1245 e6fb8dbae7403fbbf8c8a31a619a0641 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 1.9E-12 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1245 e6fb8dbae7403fbbf8c8a31a619a0641 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 1.9E-12 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1245 e6fb8dbae7403fbbf8c8a31a619a0641 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 129 148 1.9E-12 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 7 832 24.04 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 SMART SM00434 11 490 3.9E-274 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 637 676 3.3E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 784 830 1.4E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 684 729 2.1E-13 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 530 575 3.5E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 780 9.2E-13 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 580 628 1.2E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 SUPERFAMILY SSF56719 30 513 1.01E-178 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 SUPERFAMILY SSF101904 524 840 3.66E-105 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Gene3D G3DSA:1.10.268.10 370 484 3.2E-223 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Gene3D G3DSA:2.120.10.90 522 831 1.5E-121 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Gene3D G3DSA:3.30.1360.40 236 333 3.2E-223 T 12-10-2018 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Gene3D G3DSA:3.90.199.10 33 512 3.2E-223 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 497 5.6E-151 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_1387 d32af47e9dffa2e8f76ab2089d3a7664 845 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 830 0.0 T 12-10-2018 Acife_2287 a6c25e50ff2040c372dd164fea776396 557 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 8 359 5.5E-101 T 12-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Acife_2287 a6c25e50ff2040c372dd164fea776396 557 Pfam PF01583 Adenylylsulphate kinase 368 522 1.9E-60 T 12-10-2018 Acife_2287 a6c25e50ff2040c372dd164fea776396 557 SUPERFAMILY SSF52374 162 362 8.44E-58 T 12-10-2018 Acife_2287 a6c25e50ff2040c372dd164fea776396 557 Pfam PF01747 ATP-sulfurylase 151 360 8.1E-71 T 12-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Acife_2287 a6c25e50ff2040c372dd164fea776396 557 Gene3D G3DSA:3.40.50.300 367 548 1.1E-61 T 12-10-2018 Acife_2287 a6c25e50ff2040c372dd164fea776396 557 Pfam PF14306 PUA-like domain 8 132 5.8E-39 T 12-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Acife_2287 a6c25e50ff2040c372dd164fea776396 557 Gene3D G3DSA:3.40.50.620 152 366 2.5E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2287 a6c25e50ff2040c372dd164fea776396 557 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 367 542 32.57 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Acife_2287 a6c25e50ff2040c372dd164fea776396 557 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 365 523 1.7E-58 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Acife_2287 a6c25e50ff2040c372dd164fea776396 557 SUPERFAMILY SSF88697 5 134 2.88E-37 T 12-10-2018 IPR015947 PUA-like superfamily Acife_2287 a6c25e50ff2040c372dd164fea776396 557 SUPERFAMILY SSF52540 367 541 2.39E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2287 a6c25e50ff2040c372dd164fea776396 557 Gene3D G3DSA:3.10.400.10 2 133 7.2E-42 T 12-10-2018 Acife_2343 010ceaea9667d35435f287ee157d5df7 346 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 5.6E-26 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Acife_2343 010ceaea9667d35435f287ee157d5df7 346 Pfam PF01548 Transposase 6 146 5.4E-18 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Acife_2348 010ceaea9667d35435f287ee157d5df7 346 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 5.6E-26 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Acife_2348 010ceaea9667d35435f287ee157d5df7 346 Pfam PF01548 Transposase 6 146 5.4E-18 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Acife_1672 23574da9b047cdfe02f7a11ff9d49a76 488 Gene3D G3DSA:3.40.309.10 255 441 5.9E-166 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Acife_1672 23574da9b047cdfe02f7a11ff9d49a76 488 Pfam PF00171 Aldehyde dehydrogenase family 21 469 2.0E-157 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Acife_1672 23574da9b047cdfe02f7a11ff9d49a76 488 Gene3D G3DSA:3.40.605.10 20 464 5.9E-166 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Acife_1672 23574da9b047cdfe02f7a11ff9d49a76 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Acife_1672 23574da9b047cdfe02f7a11ff9d49a76 488 SUPERFAMILY SSF53720 5 474 4.84E-156 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Acife_1578 f8f9027a5c7136b5b514b8585c689182 382 SUPERFAMILY SSF140931 104 300 4.32E-44 T 12-10-2018 IPR036597 Fido-like domain superfamily Acife_1578 f8f9027a5c7136b5b514b8585c689182 382 Pfam PF02661 Fic/DOC family 129 234 1.5E-20 T 12-10-2018 IPR003812 Fido domain Acife_1578 f8f9027a5c7136b5b514b8585c689182 382 Pfam PF13784 Fic/DOC family N-terminal 41 116 8.8E-21 T 12-10-2018 IPR025758 Fic/DOC N-terminal Acife_1578 f8f9027a5c7136b5b514b8585c689182 382 Gene3D G3DSA:1.10.3290.10 63 295 6.3E-52 T 12-10-2018 IPR036597 Fido-like domain superfamily Acife_1578 f8f9027a5c7136b5b514b8585c689182 382 PIRSF PIRSF038925 14 382 9.1E-102 T 12-10-2018 IPR026287 Adenosine monophosphate-protein transferase Acife_1578 f8f9027a5c7136b5b514b8585c689182 382 SUPERFAMILY SSF46785 302 373 3.01E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0014 93d63abfb91f6a23d97dc74e233be8c4 363 Pfam PF01476 LysM domain 38 84 5.2E-12 T 12-10-2018 IPR018392 LysM domain Acife_0014 93d63abfb91f6a23d97dc74e233be8c4 363 Gene3D G3DSA:3.10.350.10 36 83 6.3E-14 T 12-10-2018 IPR036779 LysM domain superfamily Acife_0014 93d63abfb91f6a23d97dc74e233be8c4 363 SMART SM00257 37 85 2.3E-7 T 12-10-2018 IPR018392 LysM domain Acife_0014 93d63abfb91f6a23d97dc74e233be8c4 363 SUPERFAMILY SSF54106 36 85 2.09E-8 T 12-10-2018 Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 Gene3D G3DSA:3.40.50.720 2 240 1.9E-75 T 12-10-2018 Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 Pfam PF00106 short chain dehydrogenase 3 194 3.4E-55 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.1E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.1E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.1E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.1E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 3.1E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 3.1E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 SUPERFAMILY SSF51735 3 239 2.67E-73 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2843 7f7a21b07d0bb0b7e700909a1b077c71 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 187 8.3E-5 T 12-10-2018 Acife_3038 2b8946fe88c449379837b64e10b67bf4 421 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 117 204 3.6E-14 T 12-10-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC Acife_0217 271792f199084c1e3876dcd5aa1392b3 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 2.4E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_0217 271792f199084c1e3876dcd5aa1392b3 248 Pfam PF00072 Response regulator receiver domain 7 117 1.1E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_0217 271792f199084c1e3876dcd5aa1392b3 248 SUPERFAMILY SSF46894 127 233 6.24E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Acife_0217 271792f199084c1e3876dcd5aa1392b3 248 Gene3D G3DSA:1.10.10.10 132 236 2.6E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0217 271792f199084c1e3876dcd5aa1392b3 248 SMART SM00862 154 231 9.2E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_0217 271792f199084c1e3876dcd5aa1392b3 248 Gene3D G3DSA:3.40.50.2300 5 131 2.8E-38 T 12-10-2018 Acife_0217 271792f199084c1e3876dcd5aa1392b3 248 SMART SM00448 5 116 4.7E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_0217 271792f199084c1e3876dcd5aa1392b3 248 SUPERFAMILY SSF52172 3 128 4.41E-42 T 12-10-2018 IPR011006 CheY-like superfamily Acife_1518 5df6d68c92ede93556d0d78217a12397 395 SMART SM00564 114 145 1.1E-5 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_1518 5df6d68c92ede93556d0d78217a12397 395 SMART SM00564 153 185 1.2E-5 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_1518 5df6d68c92ede93556d0d78217a12397 395 SMART SM00564 198 230 0.002 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_1518 5df6d68c92ede93556d0d78217a12397 395 SMART SM00564 287 319 0.0036 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_1518 5df6d68c92ede93556d0d78217a12397 395 SMART SM00564 250 281 65.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_1518 5df6d68c92ede93556d0d78217a12397 395 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 8 392 28.197 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB Acife_1518 5df6d68c92ede93556d0d78217a12397 395 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 12 390 7.1E-116 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB Acife_1518 5df6d68c92ede93556d0d78217a12397 395 Pfam PF13360 PQQ-like domain 95 318 3.5E-51 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Acife_1518 5df6d68c92ede93556d0d78217a12397 395 SUPERFAMILY SSF50998 57 380 7.46E-62 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Acife_1518 5df6d68c92ede93556d0d78217a12397 395 Gene3D G3DSA:2.130.10.10 34 394 2.7E-81 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Acife_2734 86e512fbaa676a1f1ac09361c25a5ca5 367 Pfam PF01872 RibD C-terminal domain 151 358 4.4E-48 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Acife_2734 86e512fbaa676a1f1ac09361c25a5ca5 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 363 4.1E-54 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Acife_2734 86e512fbaa676a1f1ac09361c25a5ca5 367 PIRSF PIRSF006769 2 366 2.5E-121 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Acife_2734 86e512fbaa676a1f1ac09361c25a5ca5 367 Gene3D G3DSA:3.40.430.10 146 367 3.7E-67 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Acife_2734 86e512fbaa676a1f1ac09361c25a5ca5 367 SUPERFAMILY SSF53927 7 149 3.37E-44 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Acife_2734 86e512fbaa676a1f1ac09361c25a5ca5 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 360 7.0E-115 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Acife_2734 86e512fbaa676a1f1ac09361c25a5ca5 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 104 8.7E-18 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Acife_2734 86e512fbaa676a1f1ac09361c25a5ca5 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Acife_2734 86e512fbaa676a1f1ac09361c25a5ca5 367 SUPERFAMILY SSF53597 148 361 5.07E-58 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Acife_2734 86e512fbaa676a1f1ac09361c25a5ca5 367 Gene3D G3DSA:3.40.140.10 2 145 8.0E-44 T 12-10-2018 Acife_1482 a127f3bb02d7ac32bb277b141c8072ea 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 2.3E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Acife_1482 a127f3bb02d7ac32bb277b141c8072ea 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 2.3E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Acife_1482 a127f3bb02d7ac32bb277b141c8072ea 203 SUPERFAMILY SSF46689 20 94 8.21E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_1482 a127f3bb02d7ac32bb277b141c8072ea 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 75 3.2E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Acife_1482 a127f3bb02d7ac32bb277b141c8072ea 203 Gene3D G3DSA:1.10.357.10 19 196 2.3E-50 T 12-10-2018 Acife_1482 a127f3bb02d7ac32bb277b141c8072ea 203 SUPERFAMILY SSF48498 99 189 2.31E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Acife_0492 9f5425bb6e6059c6c56362c66554b5db 383 SUPERFAMILY SSF53383 6 374 1.67E-93 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_0492 9f5425bb6e6059c6c56362c66554b5db 383 Gene3D G3DSA:3.90.1150.10 6 370 2.5E-141 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_0492 9f5425bb6e6059c6c56362c66554b5db 383 Pfam PF00266 Aminotransferase class-V 6 364 2.6E-69 T 12-10-2018 IPR000192 Aminotransferase class V domain Acife_0492 9f5425bb6e6059c6c56362c66554b5db 383 Gene3D G3DSA:3.40.640.10 17 258 2.5E-141 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_0492 9f5425bb6e6059c6c56362c66554b5db 383 PIRSF PIRSF005572 3 380 1.4E-127 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Acife_0492 9f5425bb6e6059c6c56362c66554b5db 383 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Acife_0670 6639d8464266dba7c9a6a65879fd78b0 492 Gene3D G3DSA:3.40.630.30 156 303 6.0E-7 T 12-10-2018 Acife_0670 6639d8464266dba7c9a6a65879fd78b0 492 SUPERFAMILY SSF88723 1 123 2.41E-5 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_0670 6639d8464266dba7c9a6a65879fd78b0 492 SUPERFAMILY SSF55729 169 301 3.9E-9 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_0163 5f885afb4b24e41282705a2e5ca9640d 389 Gene3D G3DSA:3.90.220.20 8 146 1.4E-22 T 12-10-2018 Acife_0163 5f885afb4b24e41282705a2e5ca9640d 389 Gene3D G3DSA:3.90.220.20 201 378 4.4E-30 T 12-10-2018 Acife_0163 5f885afb4b24e41282705a2e5ca9640d 389 Gene3D G3DSA:1.10.287.1120 147 200 7.9E-7 T 12-10-2018 Acife_0163 5f885afb4b24e41282705a2e5ca9640d 389 SUPERFAMILY SSF116734 213 380 9.16E-31 T 12-10-2018 Acife_0163 5f885afb4b24e41282705a2e5ca9640d 389 SUPERFAMILY SSF116734 5 189 1.01E-31 T 12-10-2018 Acife_0163 5f885afb4b24e41282705a2e5ca9640d 389 Pfam PF01420 Type I restriction modification DNA specificity domain 5 174 9.0E-17 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Acife_0163 5f885afb4b24e41282705a2e5ca9640d 389 Pfam PF01420 Type I restriction modification DNA specificity domain 282 359 1.5E-5 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Acife_3180 03f1f17efb6cfd166ef32cf544b23f01 148 Gene3D G3DSA:1.10.10.10 1 51 2.0E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_3180 03f1f17efb6cfd166ef32cf544b23f01 148 Pfam PF01037 Lrp/AsnC ligand binding domain 70 137 3.0E-7 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Acife_3180 03f1f17efb6cfd166ef32cf544b23f01 148 SUPERFAMILY SSF46785 1 58 1.15E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_3180 03f1f17efb6cfd166ef32cf544b23f01 148 Pfam PF13404 AsnC-type helix-turn-helix domain 1 41 9.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Acife_3180 03f1f17efb6cfd166ef32cf544b23f01 148 SMART SM00344 1 107 1.8E-19 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Acife_3180 03f1f17efb6cfd166ef32cf544b23f01 148 Gene3D G3DSA:3.30.70.920 53 145 1.4E-11 T 12-10-2018 Acife_3180 03f1f17efb6cfd166ef32cf544b23f01 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.1E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Acife_3180 03f1f17efb6cfd166ef32cf544b23f01 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.1E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Acife_3180 03f1f17efb6cfd166ef32cf544b23f01 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.1E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Acife_3180 03f1f17efb6cfd166ef32cf544b23f01 148 SUPERFAMILY SSF54909 63 144 1.88E-10 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Acife_3180 03f1f17efb6cfd166ef32cf544b23f01 148 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Acife_0111 9b068066be1624874fae6d52625f134a 646 Gene3D G3DSA:1.10.10.1020 3 132 4.1E-16 T 12-10-2018 Acife_0111 9b068066be1624874fae6d52625f134a 646 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 18 639 48.348 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Acife_0111 9b068066be1624874fae6d52625f134a 646 Gene3D G3DSA:3.40.50.300 516 630 1.3E-23 T 12-10-2018 Acife_0111 9b068066be1624874fae6d52625f134a 646 Gene3D G3DSA:3.40.50.300 394 515 1.5E-14 T 12-10-2018 Acife_0111 9b068066be1624874fae6d52625f134a 646 SUPERFAMILY SSF52540 315 639 3.72E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0111 9b068066be1624874fae6d52625f134a 646 SUPERFAMILY SSF52540 7 361 2.34E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0111 9b068066be1624874fae6d52625f134a 646 Pfam PF13538 UvrD-like helicase C-terminal domain 570 611 5.1E-15 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain Acife_0111 9b068066be1624874fae6d52625f134a 646 Gene3D G3DSA:3.40.50.300 133 384 1.3E-64 T 12-10-2018 Acife_0111 9b068066be1624874fae6d52625f134a 646 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 640 4.4E-168 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Acife_0111 9b068066be1624874fae6d52625f134a 646 Pfam PF13604 AAA domain 183 349 5.0E-28 T 12-10-2018 Acife_0976 bf8577d81a515a070918cf5354059842 67 PRINTS PR00050 Cold shock protein signature 25 34 3.1E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_0976 bf8577d81a515a070918cf5354059842 67 PRINTS PR00050 Cold shock protein signature 4 19 3.1E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_0976 bf8577d81a515a070918cf5354059842 67 PRINTS PR00050 Cold shock protein signature 40 58 3.1E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_0976 bf8577d81a515a070918cf5354059842 67 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 1.6E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_0976 bf8577d81a515a070918cf5354059842 67 SUPERFAMILY SSF50249 1 65 1.41E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_0976 bf8577d81a515a070918cf5354059842 67 PIRSF PIRSF002599 1 67 2.6E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 Acife_0976 bf8577d81a515a070918cf5354059842 67 SMART SM00357 3 67 1.3E-29 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Acife_0976 bf8577d81a515a070918cf5354059842 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 12-10-2018 IPR019844 Cold-shock conserved site Acife_0976 bf8577d81a515a070918cf5354059842 67 Gene3D G3DSA:2.40.50.140 1 66 6.2E-31 T 12-10-2018 Acife_2160 baa88e205d1ee1fcfbace2600e0277d9 217 PIRSF PIRSF016482 2 216 2.6E-52 T 12-10-2018 IPR007445 Pilus assembly protein, PilO Acife_2160 baa88e205d1ee1fcfbace2600e0277d9 217 Pfam PF04350 Pilus assembly protein, PilO 51 202 5.0E-48 T 12-10-2018 IPR007445 Pilus assembly protein, PilO Acife_2160 baa88e205d1ee1fcfbace2600e0277d9 217 Gene3D G3DSA:3.30.70.60 94 212 5.1E-36 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Acife_1976 975918798a8f35546be7cda7ddba6465 204 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1976 975918798a8f35546be7cda7ddba6465 204 SUPERFAMILY SSF54523 15 95 1.49E-15 T 12-10-2018 Acife_1976 975918798a8f35546be7cda7ddba6465 204 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 34 4.3E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1976 975918798a8f35546be7cda7ddba6465 204 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 7.5E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1976 975918798a8f35546be7cda7ddba6465 204 Gene3D G3DSA:3.30.700.10 15 147 1.5E-19 T 12-10-2018 Acife_0066 d256db768e9bab64bcb30b7dc5247ca2 1163 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 382 587 5.2E-9 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_0066 d256db768e9bab64bcb30b7dc5247ca2 1163 SUPERFAMILY SSF51971 380 724 8.24E-18 T 12-10-2018 Acife_0066 d256db768e9bab64bcb30b7dc5247ca2 1163 Gene3D G3DSA:3.50.50.60 508 610 5.6E-6 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_0066 d256db768e9bab64bcb30b7dc5247ca2 1163 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 383 402 3.6E-7 T 12-10-2018 Acife_0066 d256db768e9bab64bcb30b7dc5247ca2 1163 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 496 514 3.6E-7 T 12-10-2018 Acife_0066 d256db768e9bab64bcb30b7dc5247ca2 1163 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 550 568 3.6E-7 T 12-10-2018 Acife_0066 d256db768e9bab64bcb30b7dc5247ca2 1163 SUPERFAMILY SSF63380 839 938 1.34E-10 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Acife_0066 d256db768e9bab64bcb30b7dc5247ca2 1163 Gene3D G3DSA:2.40.30.10 836 938 3.7E-9 T 12-10-2018 Acife_0066 d256db768e9bab64bcb30b7dc5247ca2 1163 Gene3D G3DSA:3.50.50.60 383 507 5.6E-6 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1144 cd493af4bb4884ff666f111aa3028111 110 Pfam PF05534 HicB family 55 104 2.1E-20 T 12-10-2018 IPR008651 Uncharacterised protein family HicB Acife_1144 cd493af4bb4884ff666f111aa3028111 110 SUPERFAMILY SSF143100 1 75 2.88E-7 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like Acife_1144 cd493af4bb4884ff666f111aa3028111 110 SUPERFAMILY SSF47598 71 108 8.58E-10 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_1144 cd493af4bb4884ff666f111aa3028111 110 Gene3D G3DSA:1.10.1220.10 70 110 1.6E-6 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Acife_1622 e1b8b7da0858438d030441acd2f0215d 532 Gene3D G3DSA:3.50.50.60 89 361 4.5E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1622 e1b8b7da0858438d030441acd2f0215d 532 Gene3D G3DSA:3.90.660.20 39 78 4.0E-16 T 12-10-2018 Acife_1622 e1b8b7da0858438d030441acd2f0215d 532 SUPERFAMILY SSF51905 2 353 3.52E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1622 e1b8b7da0858438d030441acd2f0215d 532 SUPERFAMILY SSF54373 199 301 2.75E-19 T 12-10-2018 Acife_1622 e1b8b7da0858438d030441acd2f0215d 532 Pfam PF01593 Flavin containing amine oxidoreductase 11 84 2.0E-17 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Acife_1622 e1b8b7da0858438d030441acd2f0215d 532 Pfam PF01593 Flavin containing amine oxidoreductase 85 353 2.3E-24 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Acife_1622 e1b8b7da0858438d030441acd2f0215d 532 Gene3D G3DSA:3.50.50.60 4 38 4.0E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1751 3097b9890e7eadcffcf1f1302cbae7c2 280 Gene3D G3DSA:3.55.30.10 1 169 3.7E-36 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Acife_1751 3097b9890e7eadcffcf1f1302cbae7c2 280 SUPERFAMILY SSF118352 216 274 5.76E-16 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Acife_1751 3097b9890e7eadcffcf1f1302cbae7c2 280 Gene3D G3DSA:3.90.1280.10 217 275 3.5E-18 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Acife_1751 3097b9890e7eadcffcf1f1302cbae7c2 280 Pfam PF01430 Hsp33 protein 6 264 1.0E-57 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Acife_1751 3097b9890e7eadcffcf1f1302cbae7c2 280 SUPERFAMILY SSF64397 3 226 1.31E-37 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Acife_1751 3097b9890e7eadcffcf1f1302cbae7c2 280 PIRSF PIRSF005261 2 276 3.7E-56 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 SMART SM00448 598 713 4.3E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 SUPERFAMILY SSF55874 261 437 3.67E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 Gene3D G3DSA:1.20.120.160 722 858 3.4E-14 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 5.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 5.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 5.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 5.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 433 1.4E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 SMART SM00388 207 272 7.0E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 Gene3D G3DSA:1.10.287.130 183 270 2.3E-26 T 12-10-2018 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 Gene3D G3DSA:3.30.565.10 271 439 3.7E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 Pfam PF00512 His Kinase A (phospho-acceptor) domain 207 272 1.1E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 Pfam PF00072 Response regulator receiver domain 601 713 5.7E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 Pfam PF01627 Hpt domain 766 818 1.2E-5 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 SUPERFAMILY SSF47226 740 852 2.75E-14 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 SUPERFAMILY SSF47384 191 273 3.53E-22 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 Gene3D G3DSA:3.40.50.2300 586 721 7.1E-32 T 12-10-2018 Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 SUPERFAMILY SSF52172 596 732 6.12E-33 T 12-10-2018 IPR011006 CheY-like superfamily Acife_1591 cac7dbf22440f0806dd989c856d626e9 858 SMART SM00387 319 435 4.3E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_3079 273334e222f6fb0e966f89c6bf477b5c 124 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 2 124 35.327 T 12-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 Acife_3079 273334e222f6fb0e966f89c6bf477b5c 124 SUPERFAMILY SSF89360 18 113 6.47E-31 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Acife_3079 273334e222f6fb0e966f89c6bf477b5c 124 Gene3D G3DSA:2.60.300.12 18 124 2.8E-33 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Acife_3079 273334e222f6fb0e966f89c6bf477b5c 124 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 105 122 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Acife_3079 273334e222f6fb0e966f89c6bf477b5c 124 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 20 123 1.6E-37 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Acife_3079 273334e222f6fb0e966f89c6bf477b5c 124 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 4.0E-19 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Acife_0702 065dd6172060e78e377dcef804babfa2 207 Gene3D G3DSA:3.40.50.1390 2 153 2.0E-30 T 12-10-2018 Acife_0702 065dd6172060e78e377dcef804babfa2 207 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Acife_0702 065dd6172060e78e377dcef804babfa2 207 SUPERFAMILY SSF53041 3 146 8.11E-30 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Acife_0702 065dd6172060e78e377dcef804babfa2 207 SMART SM00857 4 147 3.3E-37 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Acife_0702 065dd6172060e78e377dcef804babfa2 207 Pfam PF00239 Resolvase, N terminal domain 4 146 4.1E-33 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 827 20.01 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 SUPERFAMILY SSF81886 615 902 4.71E-79 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 Gene3D G3DSA:1.10.3060.10 616 827 3.4E-74 T 12-10-2018 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 SUPERFAMILY SSF52540 6 403 1.68E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 Pfam PF07516 SecA Wing and Scaffold domain 612 823 5.9E-68 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 Gene3D G3DSA:3.40.50.300 405 615 2.1E-84 T 12-10-2018 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 SUPERFAMILY SSF81767 227 356 1.96E-46 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 Pfam PF01043 SecA preprotein cross-linking domain 232 346 4.4E-40 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 SUPERFAMILY SSF52540 405 613 7.98E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 Pfam PF07517 SecA DEAD-like domain 7 389 9.8E-131 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 SMART SM00958 228 346 2.1E-73 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 Gene3D G3DSA:3.90.1440.10 229 356 3.9E-177 T 12-10-2018 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 SMART SM00957 6 390 7.3E-288 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 PRINTS PR00906 SecA protein signature 364 381 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 PRINTS PR00906 SecA protein signature 170 190 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 PRINTS PR00906 SecA protein signature 327 349 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 PRINTS PR00906 SecA protein signature 401 414 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 PRINTS PR00906 SecA protein signature 63 87 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 PRINTS PR00906 SecA protein signature 101 115 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 PRINTS PR00906 SecA protein signature 117 127 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 Pfam PF02810 SEC-C motif 894 912 4.1E-10 T 12-10-2018 IPR004027 SEC-C motif Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 810 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 Gene3D G3DSA:3.40.50.300 23 403 3.9E-177 T 12-10-2018 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 ProSitePatterns PS01312 SecA family signature. 488 503 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Acife_2803 c76da5b876a30a974f028b8aaea98e25 914 Gene3D G3DSA:3.10.450.50 876 913 2.3E-8 T 12-10-2018 Acife_1188 e0b8688d41ac4812be7b7933b165ec89 84 Gene3D G3DSA:2.10.260.10 1 82 9.1E-17 T 12-10-2018 Acife_1188 e0b8688d41ac4812be7b7933b165ec89 84 SUPERFAMILY SSF89447 3 74 2.96E-13 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 SUPERFAMILY SSF141868 707 952 1.83E-60 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 SUPERFAMILY SSF55781 188 330 5.23E-13 T 12-10-2018 Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 SUPERFAMILY SSF55073 534 689 7.77E-43 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 SMART SM00052 700 944 1.8E-52 T 12-10-2018 IPR001633 EAL domain Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 Pfam PF00990 Diguanylate cyclase, GGDEF domain 529 686 6.0E-41 T 12-10-2018 IPR000160 GGDEF domain Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 Gene3D G3DSA:3.30.450.40 339 513 1.4E-12 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 SMART SM00267 517 691 5.1E-49 T 12-10-2018 IPR000160 GGDEF domain Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 SMART SM00065 359 519 0.0051 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 Gene3D G3DSA:3.20.20.450 701 960 3.7E-66 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 Gene3D G3DSA:1.10.490.10 10 158 2.4E-9 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 Pfam PF00563 EAL domain 708 938 8.7E-51 T 12-10-2018 IPR001633 EAL domain Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 SUPERFAMILY SSF55781 362 519 1.57E-12 T 12-10-2018 Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 Pfam PF13185 GAF domain 185 328 2.8E-11 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 527 686 2.3E-37 T 12-10-2018 IPR000160 GGDEF domain Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 Gene3D G3DSA:3.30.450.40 159 338 1.9E-11 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_0915 2eae8c6cf6e7e5ced5256380509b7f33 1071 Gene3D G3DSA:3.30.70.270 523 692 2.6E-48 T 12-10-2018 Acife_3208 b733c4cff159f12b9e894f46875831b6 304 Gene3D G3DSA:1.20.58.340 244 301 5.7E-6 T 12-10-2018 Acife_3208 b733c4cff159f12b9e894f46875831b6 304 SUPERFAMILY SSF143865 15 230 1.31E-14 T 12-10-2018 Acife_3208 b733c4cff159f12b9e894f46875831b6 304 Gene3D G3DSA:3.30.460.20 7 120 3.1E-6 T 12-10-2018 Acife_3208 b733c4cff159f12b9e894f46875831b6 304 Gene3D G3DSA:1.20.58.340 121 242 1.5E-6 T 12-10-2018 Acife_3208 b733c4cff159f12b9e894f46875831b6 304 Pfam PF01544 CorA-like Mg2+ transporter protein 18 297 3.5E-28 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Acife_3208 b733c4cff159f12b9e894f46875831b6 304 SUPERFAMILY SSF144083 236 299 6.15E-7 T 12-10-2018 Acife_1405 b5332076803be59041a3acf68a185143 522 Gene3D G3DSA:1.10.4030.30 41 200 1.5E-11 T 12-10-2018 Acife_1405 b5332076803be59041a3acf68a185143 522 SUPERFAMILY SSF109998 41 241 2.12E-23 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Acife_1405 b5332076803be59041a3acf68a185143 522 Pfam PF13624 SurA N-terminal domain 1 165 4.5E-47 T 12-10-2018 Acife_3249 c6a6594baa674c234f62aaf0eddc453d 97 SUPERFAMILY SSF47598 10 87 1.22E-17 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_3249 c6a6594baa674c234f62aaf0eddc453d 97 Pfam PF08681 Protein of unknown function (DUF1778) 14 88 5.3E-22 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Acife_3249 c6a6594baa674c234f62aaf0eddc453d 97 Gene3D G3DSA:1.20.5.780 7 91 1.4E-10 T 12-10-2018 Acife_2232 9a394129aac921c22dd318383e95cca9 473 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 2 468 60.072 T 12-10-2018 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2232 9a394129aac921c22dd318383e95cca9 473 Gene3D G3DSA:3.20.20.110 143 473 4.3E-155 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2232 9a394129aac921c22dd318383e95cca9 473 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 147 455 1.3E-132 T 12-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2232 9a394129aac921c22dd318383e95cca9 473 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 189 197 - T 12-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2232 9a394129aac921c22dd318383e95cca9 473 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 16 137 5.8E-45 T 12-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2232 9a394129aac921c22dd318383e95cca9 473 SUPERFAMILY SSF54966 5 141 3.93E-57 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2232 9a394129aac921c22dd318383e95cca9 473 Gene3D G3DSA:3.30.70.150 15 141 1.7E-50 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_2232 9a394129aac921c22dd318383e95cca9 473 SUPERFAMILY SSF51649 143 469 6.02E-145 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_1592 759973977592f4cba94660c2d8409b72 389 SMART SM00448 30 145 2.4E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1592 759973977592f4cba94660c2d8409b72 389 SMART SM00471 194 331 5.3E-14 T 12-10-2018 IPR003607 HD/PDEase domain Acife_1592 759973977592f4cba94660c2d8409b72 389 Gene3D G3DSA:1.10.3210.10 173 374 4.9E-75 T 12-10-2018 Acife_1592 759973977592f4cba94660c2d8409b72 389 SUPERFAMILY SSF52172 28 156 3.13E-27 T 12-10-2018 IPR011006 CheY-like superfamily Acife_1592 759973977592f4cba94660c2d8409b72 389 Pfam PF00072 Response regulator receiver domain 32 143 6.5E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1592 759973977592f4cba94660c2d8409b72 389 SUPERFAMILY SSF109604 186 362 1.32E-45 T 12-10-2018 Acife_1592 759973977592f4cba94660c2d8409b72 389 Pfam PF01966 HD domain 199 321 9.0E-22 T 12-10-2018 IPR006674 HD domain Acife_1592 759973977592f4cba94660c2d8409b72 389 Gene3D G3DSA:3.40.50.2300 19 165 7.8E-28 T 12-10-2018 Acife_0444 b428ebe0f9b23efe4d6fbaff0e00d761 564 Pfam PF00361 Proton-conducting membrane transporter 143 362 3.3E-35 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_0444 b428ebe0f9b23efe4d6fbaff0e00d761 564 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 81 129 1.0E-10 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_0444 b428ebe0f9b23efe4d6fbaff0e00d761 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 233 254 1.8E-23 T 12-10-2018 Acife_0444 b428ebe0f9b23efe4d6fbaff0e00d761 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 255 281 1.8E-23 T 12-10-2018 Acife_0444 b428ebe0f9b23efe4d6fbaff0e00d761 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 116 1.8E-23 T 12-10-2018 Acife_0444 b428ebe0f9b23efe4d6fbaff0e00d761 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 166 187 1.8E-23 T 12-10-2018 Acife_0444 b428ebe0f9b23efe4d6fbaff0e00d761 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 322 334 1.8E-23 T 12-10-2018 Acife_0444 b428ebe0f9b23efe4d6fbaff0e00d761 564 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 119 139 1.8E-23 T 12-10-2018 Acife_1889 68a07e90bd6ee6bbf978553720bda148 376 Pfam PF00589 Phage integrase family 187 363 1.9E-17 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_1889 68a07e90bd6ee6bbf978553720bda148 376 Gene3D G3DSA:1.10.443.10 164 366 2.0E-23 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_1889 68a07e90bd6ee6bbf978553720bda148 376 SUPERFAMILY SSF56349 57 368 5.0E-37 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_1889 68a07e90bd6ee6bbf978553720bda148 376 Gene3D G3DSA:1.10.150.130 53 163 1.4E-5 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_1861 0f71a812ce4277dc8970530b07ff7b7d 397 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 155 4.7E-5 T 12-10-2018 Acife_1861 0f71a812ce4277dc8970530b07ff7b7d 397 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 4.7E-5 T 12-10-2018 Acife_1861 0f71a812ce4277dc8970530b07ff7b7d 397 Gene3D G3DSA:1.20.1250.20 1 379 1.2E-73 T 12-10-2018 Acife_1861 0f71a812ce4277dc8970530b07ff7b7d 397 SUPERFAMILY SSF103473 5 380 1.96E-60 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_1861 0f71a812ce4277dc8970530b07ff7b7d 397 Pfam PF07690 Major Facilitator Superfamily 13 309 1.1E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_1261 bb25b698668d6ef3c24308e1dc156f91 312 Pfam PF02470 MlaD protein 46 112 2.8E-13 T 12-10-2018 IPR003399 Mce/MlaD Acife_2072 f22222b794602c899042b9266c776bf4 255 SMART SM00100 43 161 4.5E-22 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Acife_2072 f22222b794602c899042b9266c776bf4 255 Pfam PF00027 Cyclic nucleotide-binding domain 63 148 1.6E-17 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Acife_2072 f22222b794602c899042b9266c776bf4 255 SMART SM00419 196 244 6.5E-10 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Acife_2072 f22222b794602c899042b9266c776bf4 255 SUPERFAMILY SSF51206 33 173 3.67E-31 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Acife_2072 f22222b794602c899042b9266c776bf4 255 Pfam PF13545 Crp-like helix-turn-helix domain 181 250 3.1E-16 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Acife_2072 f22222b794602c899042b9266c776bf4 255 Gene3D G3DSA:2.60.120.10 27 175 2.3E-36 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_2072 f22222b794602c899042b9266c776bf4 255 SUPERFAMILY SSF46785 178 253 1.12E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2072 f22222b794602c899042b9266c776bf4 255 Gene3D G3DSA:1.10.10.10 176 252 9.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2072 f22222b794602c899042b9266c776bf4 255 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 218 233 2.4E-5 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Acife_2072 f22222b794602c899042b9266c776bf4 255 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 202 218 2.4E-5 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Acife_1777 427653ac5ce4d1421b0ca88f595a85a5 286 SUPERFAMILY SSF89550 10 279 5.3E-49 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Acife_1777 427653ac5ce4d1421b0ca88f595a85a5 286 Gene3D G3DSA:1.10.150.650 103 174 3.0E-78 T 12-10-2018 Acife_1777 427653ac5ce4d1421b0ca88f595a85a5 286 Pfam PF02811 PHP domain 11 73 6.9E-8 T 12-10-2018 IPR004013 PHP domain GO:0003824 Acife_1777 427653ac5ce4d1421b0ca88f595a85a5 286 Gene3D G3DSA:3.20.20.140 10 255 3.0E-78 T 12-10-2018 Acife_1777 427653ac5ce4d1421b0ca88f595a85a5 286 SMART SM00481 10 75 5.8E-19 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Acife_0312 9b0fa05a2204d67f7c3e46573fe905b0 567 SUPERFAMILY SSF88713 7 456 8.9E-85 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Acife_0312 9b0fa05a2204d67f7c3e46573fe905b0 567 Gene3D G3DSA:3.20.110.20 189 488 6.2E-19 T 12-10-2018 Acife_0312 9b0fa05a2204d67f7c3e46573fe905b0 567 Pfam PF03065 Glycosyl hydrolase family 57 10 468 2.3E-74 T 12-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Acife_2863 01b9d6f268d2a3143df558d9c303a20b 393 SUPERFAMILY SSF53067 6 307 2.36E-11 T 12-10-2018 Acife_2863 01b9d6f268d2a3143df558d9c303a20b 393 Gene3D G3DSA:3.30.420.40 137 324 4.9E-103 T 12-10-2018 Acife_2863 01b9d6f268d2a3143df558d9c303a20b 393 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 364 33.964 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Acife_2863 01b9d6f268d2a3143df558d9c303a20b 393 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 4 363 5.2E-98 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Acife_2863 01b9d6f268d2a3143df558d9c303a20b 393 Gene3D G3DSA:3.30.420.40 8 359 4.9E-103 T 12-10-2018 Acife_0190 aab765832499ce6946bb1d84d23580a0 271 Pfam PF00459 Inositol monophosphatase family 33 255 3.4E-47 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_0190 aab765832499ce6946bb1d84d23580a0 271 SUPERFAMILY SSF56655 17 261 6.68E-62 T 12-10-2018 Acife_0190 aab765832499ce6946bb1d84d23580a0 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 5.0E-23 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_0190 aab765832499ce6946bb1d84d23580a0 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 5.0E-23 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_0190 aab765832499ce6946bb1d84d23580a0 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 5.0E-23 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_0190 aab765832499ce6946bb1d84d23580a0 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 5.0E-23 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_0190 aab765832499ce6946bb1d84d23580a0 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 5.0E-23 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_0190 aab765832499ce6946bb1d84d23580a0 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 5.0E-23 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Acife_0190 aab765832499ce6946bb1d84d23580a0 271 Gene3D G3DSA:3.40.190.80 149 265 1.4E-19 T 12-10-2018 Acife_0190 aab765832499ce6946bb1d84d23580a0 271 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Acife_0190 aab765832499ce6946bb1d84d23580a0 271 Gene3D G3DSA:3.30.540.10 10 142 1.3E-34 T 12-10-2018 Acife_3268 9e7bf89a580e354d2f39ba8370dcdaa4 404 Pfam PF00033 Cytochrome b/b6/petB 23 210 3.4E-51 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Acife_3268 9e7bf89a580e354d2f39ba8370dcdaa4 404 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 276 376 5.1E-33 T 12-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Acife_3268 9e7bf89a580e354d2f39ba8370dcdaa4 404 SUPERFAMILY SSF81342 8 264 8.48E-78 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Acife_3268 9e7bf89a580e354d2f39ba8370dcdaa4 404 SUPERFAMILY SSF81648 203 368 5.89E-41 T 12-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Acife_3268 9e7bf89a580e354d2f39ba8370dcdaa4 404 Gene3D G3DSA:1.20.810.10 1 404 2.4E-127 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 Gene3D G3DSA:3.40.1160.10 1 269 7.6E-92 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 263 35.975 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 Gene3D G3DSA:2.30.130.10 270 372 2.1E-27 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 PIRSF PIRSF000729 4 373 4.5E-126 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 2.3E-47 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 2.3E-47 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 2.3E-47 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 2.3E-47 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 2.3E-47 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 Pfam PF01472 PUA domain 281 349 1.8E-13 T 12-10-2018 IPR002478 PUA domain GO:0003723 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 SUPERFAMILY SSF53633 9 261 1.96E-70 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 Pfam PF00696 Amino acid kinase family 10 233 3.5E-46 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 SUPERFAMILY SSF88697 281 371 2.67E-18 T 12-10-2018 IPR015947 PUA-like superfamily Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 SMART SM00359 281 364 7.0E-7 T 12-10-2018 IPR002478 PUA domain GO:0003723 Acife_2748 c597ff4ec5dd093afbe6666aefe8d8b6 376 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 370 2.4E-122 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Acife_3149 9b253e77e220422a5038b15a03e92903 465 Gene3D G3DSA:3.30.70.100 398 462 9.0E-10 T 12-10-2018 Acife_3149 9b253e77e220422a5038b15a03e92903 465 Gene3D G3DSA:1.20.1250.20 7 397 4.1E-83 T 12-10-2018 Acife_3149 9b253e77e220422a5038b15a03e92903 465 Pfam PF07690 Major Facilitator Superfamily 27 360 1.1E-42 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_3149 9b253e77e220422a5038b15a03e92903 465 SUPERFAMILY SSF103473 11 398 3.66E-60 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_2401 624ead34ff1250dc13e016fbf23694a8 82 SUPERFAMILY SSF47598 2 67 1.33E-20 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_2401 624ead34ff1250dc13e016fbf23694a8 82 Gene3D G3DSA:1.10.1220.10 8 56 1.2E-22 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Acife_2401 624ead34ff1250dc13e016fbf23694a8 82 Pfam PF03869 Arc-like DNA binding domain 7 44 3.6E-6 T 12-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 Acife_1350 b09aab5d989599a3b50bbc2d1fee6268 56 Pfam PF05532 CsbD-like 4 56 1.4E-14 T 12-10-2018 IPR008462 CsbD-like domain Acife_1350 b09aab5d989599a3b50bbc2d1fee6268 56 Gene3D G3DSA:1.10.1470.10 1 56 1.3E-12 T 12-10-2018 IPR036629 YjbJ superfamily Acife_1350 b09aab5d989599a3b50bbc2d1fee6268 56 SUPERFAMILY SSF69047 1 56 1.83E-14 T 12-10-2018 IPR036629 YjbJ superfamily Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 Gene3D G3DSA:3.50.30.10 7 235 1.4E-66 T 12-10-2018 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 Gene3D G3DSA:3.20.20.60 236 562 5.7E-109 T 12-10-2018 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 PIRSF PIRSF000732 1 562 5.5E-195 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 451 469 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 504 516 7.6E-23 T 12-10-2018 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 451 466 7.6E-23 T 12-10-2018 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 7.6E-23 T 12-10-2018 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 468 483 7.6E-23 T 12-10-2018 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 Pfam PF00391 PEP-utilising enzyme, mobile domain 156 227 3.6E-22 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 SUPERFAMILY SSF47831 28 146 3.92E-27 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 Gene3D G3DSA:1.10.274.10 24 149 1.4E-66 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 255 544 9.4E-98 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 SUPERFAMILY SSF51621 250 545 4.97E-95 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 SUPERFAMILY SSF52009 130 248 2.09E-30 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 Pfam PF05524 PEP-utilising enzyme, N-terminal 7 128 4.9E-24 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Acife_2896 f6b8428321bef8e8ac69919489d25c38 570 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 558 3.9E-152 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Acife_1083 be178e4e549fb4cf81e1b3267d17dd71 332 Pfam PF01636 Phosphotransferase enzyme family 97 260 8.7E-15 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase Acife_1083 be178e4e549fb4cf81e1b3267d17dd71 332 SUPERFAMILY SSF56112 40 308 2.91E-27 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Acife_1083 be178e4e549fb4cf81e1b3267d17dd71 332 Gene3D G3DSA:3.90.1200.10 124 301 2.6E-13 T 12-10-2018 Acife_1093 e5bf19d28253d907895b2256be2e9d95 317 SUPERFAMILY SSF55174 17 68 2.35E-8 T 12-10-2018 Acife_1093 e5bf19d28253d907895b2256be2e9d95 317 Gene3D G3DSA:3.30.2350.10 90 315 2.0E-74 T 12-10-2018 Acife_1093 e5bf19d28253d907895b2256be2e9d95 317 Gene3D G3DSA:3.10.290.10 7 69 1.5E-14 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Acife_1093 e5bf19d28253d907895b2256be2e9d95 317 SMART SM00363 18 77 9.0E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_1093 e5bf19d28253d907895b2256be2e9d95 317 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 312 2.2E-77 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_1093 e5bf19d28253d907895b2256be2e9d95 317 Pfam PF00849 RNA pseudouridylate synthase 98 248 1.2E-26 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_1093 e5bf19d28253d907895b2256be2e9d95 317 SUPERFAMILY SSF55120 88 312 2.08E-61 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_1093 e5bf19d28253d907895b2256be2e9d95 317 Pfam PF01479 S4 domain 18 64 3.3E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_1093 e5bf19d28253d907895b2256be2e9d95 317 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_0366 1c9e98dbab2f158bbf431fa9b03757ec 1764 SUPERFAMILY SSF52540 91 278 3.74E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0366 1c9e98dbab2f158bbf431fa9b03757ec 1764 Gene3D G3DSA:3.40.50.300 79 292 2.6E-36 T 12-10-2018 Acife_0366 1c9e98dbab2f158bbf431fa9b03757ec 1764 Pfam PF00271 Helicase conserved C-terminal domain 959 1047 1.2E-6 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_0366 1c9e98dbab2f158bbf431fa9b03757ec 1764 SMART SM00490 943 1047 7.5E-8 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_0366 1c9e98dbab2f158bbf431fa9b03757ec 1764 Gene3D G3DSA:3.40.50.300 936 1089 5.5E-16 T 12-10-2018 Acife_0366 1c9e98dbab2f158bbf431fa9b03757ec 1764 SUPERFAMILY SSF52540 107 1089 1.77E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0366 1c9e98dbab2f158bbf431fa9b03757ec 1764 Pfam PF00270 DEAD/DEAH box helicase 95 278 3.4E-21 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Acife_0366 1c9e98dbab2f158bbf431fa9b03757ec 1764 SMART SM00487 88 301 1.0E-19 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_0366 1c9e98dbab2f158bbf431fa9b03757ec 1764 Pfam PF09369 Domain of unknown function (DUF1998) 1524 1622 4.4E-12 T 12-10-2018 IPR018973 DEAD/DEAH-box helicase, putative Acife_2474 545c69c05da90ee5b711366480eb32ff 351 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 332 1.5E-18 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_2474 545c69c05da90ee5b711366480eb32ff 351 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.8E-6 T 12-10-2018 Acife_2474 545c69c05da90ee5b711366480eb32ff 351 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 1.8E-6 T 12-10-2018 Acife_2474 545c69c05da90ee5b711366480eb32ff 351 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 6.1E-9 T 12-10-2018 Acife_2474 545c69c05da90ee5b711366480eb32ff 351 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.1E-9 T 12-10-2018 Acife_2474 545c69c05da90ee5b711366480eb32ff 351 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 6.1E-9 T 12-10-2018 Acife_2474 545c69c05da90ee5b711366480eb32ff 351 SUPERFAMILY SSF51971 7 343 2.47E-24 T 12-10-2018 Acife_2474 545c69c05da90ee5b711366480eb32ff 351 Gene3D G3DSA:3.50.50.60 2 153 9.2E-14 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2474 545c69c05da90ee5b711366480eb32ff 351 Gene3D G3DSA:3.50.50.60 196 343 3.9E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2510 de06762bdf4a60d0c80b0f3776108a5a 188 PRINTS PR00449 Transforming protein P21 ras signature 116 129 2.2E-8 T 12-10-2018 Acife_2510 de06762bdf4a60d0c80b0f3776108a5a 188 PRINTS PR00449 Transforming protein P21 ras signature 158 180 2.2E-8 T 12-10-2018 Acife_2510 de06762bdf4a60d0c80b0f3776108a5a 188 PRINTS PR00449 Transforming protein P21 ras signature 5 26 2.2E-8 T 12-10-2018 Acife_2510 de06762bdf4a60d0c80b0f3776108a5a 188 PRINTS PR00449 Transforming protein P21 ras signature 55 77 2.2E-8 T 12-10-2018 Acife_2510 de06762bdf4a60d0c80b0f3776108a5a 188 Gene3D G3DSA:3.40.50.300 4 181 1.3E-19 T 12-10-2018 Acife_2510 de06762bdf4a60d0c80b0f3776108a5a 188 Pfam PF03029 Conserved hypothetical ATP binding protein 30 132 6.9E-10 T 12-10-2018 IPR004130 GPN-loop GTPase Acife_2510 de06762bdf4a60d0c80b0f3776108a5a 188 SUPERFAMILY SSF52540 6 180 6.09E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0337 aea349717f275d946ada678a38a5d12f 814 PIRSF PIRSF017245 7 814 0.0 T 12-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Acife_0337 aea349717f275d946ada678a38a5d12f 814 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 423 600 9.3E-81 T 12-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Acife_0337 aea349717f275d946ada678a38a5d12f 814 Gene3D G3DSA:3.40.50.970 20 410 5.2E-165 T 12-10-2018 Acife_0337 aea349717f275d946ada678a38a5d12f 814 Pfam PF09363 XFP C-terminal domain 611 812 9.4E-84 T 12-10-2018 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 Acife_0337 aea349717f275d946ada678a38a5d12f 814 ProSitePatterns PS60002 Phosphoketolase signature 1. 168 174 - T 12-10-2018 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 Acife_0337 aea349717f275d946ada678a38a5d12f 814 Hamap MF_01403 Probable phosphoketolase. 29 814 38.793 T 12-10-2018 IPR023962 Probable phosphoketolase Acife_0337 aea349717f275d946ada678a38a5d12f 814 SUPERFAMILY SSF52518 401 613 1.94E-20 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_0337 aea349717f275d946ada678a38a5d12f 814 SUPERFAMILY SSF52518 29 393 9.82E-74 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_0337 aea349717f275d946ada678a38a5d12f 814 Pfam PF09364 XFP N-terminal domain 35 408 4.0E-181 T 12-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Acife_0337 aea349717f275d946ada678a38a5d12f 814 ProSitePatterns PS60003 Phosphoketolase signature 2. 181 199 - T 12-10-2018 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 Acife_0337 aea349717f275d946ada678a38a5d12f 814 Gene3D G3DSA:3.40.50.970 412 630 3.2E-95 T 12-10-2018 Acife_0337 aea349717f275d946ada678a38a5d12f 814 Gene3D G3DSA:3.40.50.920 631 814 3.6E-68 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Acife_2919 8b4f121ef518073db72e393a124d2a19 215 Pfam PF01634 ATP phosphoribosyltransferase 54 210 1.5E-51 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Acife_2919 8b4f121ef518073db72e393a124d2a19 215 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 149 170 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Acife_2919 8b4f121ef518073db72e393a124d2a19 215 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 214 54.562 T 12-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Acife_2919 8b4f121ef518073db72e393a124d2a19 215 Gene3D G3DSA:3.40.190.10 96 182 1.3E-72 T 12-10-2018 Acife_2919 8b4f121ef518073db72e393a124d2a19 215 Gene3D G3DSA:3.40.190.10 6 204 1.3E-72 T 12-10-2018 Acife_2919 8b4f121ef518073db72e393a124d2a19 215 SUPERFAMILY SSF53850 3 212 8.25E-66 T 12-10-2018 Acife_2919 8b4f121ef518073db72e393a124d2a19 215 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 190 2.6E-59 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 146 1.2E-73 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 Gene3D G3DSA:3.40.50.1480 148 202 2.8E-20 T 12-10-2018 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 Gene3D G3DSA:3.40.50.1480 378 468 1.6E-29 T 12-10-2018 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 196 380 1.4E-54 T 12-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 460 1.2E-155 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 SMART SM00996 10 467 4.6E-276 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 SMART SM00997 196 380 2.6E-78 T 12-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 Gene3D G3DSA:3.40.50.720 203 377 1.9E-67 T 12-10-2018 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 PIRSF PIRSF001109 2 468 7.4E-181 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 SUPERFAMILY SSF52283 9 468 7.94E-109 T 12-10-2018 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 SUPERFAMILY SSF51735 196 381 1.45E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 12-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 218 235 - T 12-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 460 44.527 T 12-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 Acife_0971 c9d4dc661bd7045c5a061b9a09a1ddef 468 Gene3D G3DSA:3.40.50.1480 2 147 1.1E-72 T 12-10-2018 Acife_3052 bdde0aa9673370caec596c0f36cbc911 92 Pfam PF07178 TraL protein 5 73 1.7E-14 T 12-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 Acife_3052 bdde0aa9673370caec596c0f36cbc911 92 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 83 1.5E-14 T 12-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 Acife_0708 c30046b2172cb4370f12ad70eb2795f7 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Acife_0708 c30046b2172cb4370f12ad70eb2795f7 369 Gene3D G3DSA:3.90.180.10 6 364 1.1E-144 T 12-10-2018 Acife_0708 c30046b2172cb4370f12ad70eb2795f7 369 Pfam PF00107 Zinc-binding dehydrogenase 197 322 1.2E-24 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Acife_0708 c30046b2172cb4370f12ad70eb2795f7 369 Gene3D G3DSA:3.40.50.720 174 312 1.1E-144 T 12-10-2018 Acife_0708 c30046b2172cb4370f12ad70eb2795f7 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 369 5.7E-181 T 12-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 Acife_0708 c30046b2172cb4370f12ad70eb2795f7 369 SUPERFAMILY SSF50129 1 184 4.11E-69 T 12-10-2018 IPR011032 GroES-like superfamily Acife_0708 c30046b2172cb4370f12ad70eb2795f7 369 SUPERFAMILY SSF51735 160 334 5.85E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0708 c30046b2172cb4370f12ad70eb2795f7 369 SUPERFAMILY SSF50129 318 369 1.27E-11 T 12-10-2018 IPR011032 GroES-like superfamily Acife_0708 c30046b2172cb4370f12ad70eb2795f7 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 149 4.3E-25 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Acife_2360 6843059c3747317c7a4fe79cc4cac879 481 PIRSF PIRSF002744 2 473 4.2E-92 T 12-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 Acife_2360 6843059c3747317c7a4fe79cc4cac879 481 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 26 447 1.1E-42 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Acife_2360 6843059c3747317c7a4fe79cc4cac879 481 Gene3D G3DSA:1.10.4160.10 6 450 2.9E-32 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily Acife_2165 199e0f6a4222d37ef359e7864d30f68d 279 Gene3D G3DSA:3.30.1360.170 25 267 1.4E-50 T 12-10-2018 Acife_2165 199e0f6a4222d37ef359e7864d30f68d 279 SUPERFAMILY SSF69796 28 262 1.07E-46 T 12-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Acife_2165 199e0f6a4222d37ef359e7864d30f68d 279 Pfam PF02511 Thymidylate synthase complementing protein 37 253 1.3E-48 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Acife_2165 199e0f6a4222d37ef359e7864d30f68d 279 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 41 258 8.0E-40 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Acife_0327 a811c41ac991eee94e3c57a81934f01d 92 PRINTS PR00974 Ribosomal protein S18 family signature 47 57 3.0E-15 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0327 a811c41ac991eee94e3c57a81934f01d 92 PRINTS PR00974 Ribosomal protein S18 family signature 65 79 3.0E-15 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0327 a811c41ac991eee94e3c57a81934f01d 92 PRINTS PR00974 Ribosomal protein S18 family signature 57 64 3.0E-15 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0327 a811c41ac991eee94e3c57a81934f01d 92 PRINTS PR00974 Ribosomal protein S18 family signature 79 89 3.0E-15 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0327 a811c41ac991eee94e3c57a81934f01d 92 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 40 89 2.0E-17 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0327 a811c41ac991eee94e3c57a81934f01d 92 Pfam PF01084 Ribosomal protein S18 38 87 1.2E-22 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0327 a811c41ac991eee94e3c57a81934f01d 92 TIGRFAM TIGR00165 S18: ribosomal protein bS18 24 91 7.9E-33 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0327 a811c41ac991eee94e3c57a81934f01d 92 SUPERFAMILY SSF46911 21 91 8.24E-27 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0327 a811c41ac991eee94e3c57a81934f01d 92 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 21 92 19.672 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0327 a811c41ac991eee94e3c57a81934f01d 92 ProSitePatterns PS00057 Ribosomal protein S18 signature. 40 63 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_0327 a811c41ac991eee94e3c57a81934f01d 92 Gene3D G3DSA:4.10.640.10 9 92 2.7E-24 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2407 403467e0db3698d92e8fece259857bc7 240 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_2407 403467e0db3698d92e8fece259857bc7 240 Gene3D G3DSA:3.30.200.20 7 231 1.2E-92 T 12-10-2018 Acife_2407 403467e0db3698d92e8fece259857bc7 240 SUPERFAMILY SSF56104 4 232 1.18E-79 T 12-10-2018 Acife_2407 403467e0db3698d92e8fece259857bc7 240 Pfam PF01259 SAICAR synthetase 7 231 2.3E-64 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_2407 403467e0db3698d92e8fece259857bc7 240 Gene3D G3DSA:3.30.470.20 85 220 1.2E-92 T 12-10-2018 Acife_2407 403467e0db3698d92e8fece259857bc7 240 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_2407 403467e0db3698d92e8fece259857bc7 240 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 30.983 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_2407 403467e0db3698d92e8fece259857bc7 240 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 233 2.1E-69 T 12-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Acife_3082 487f01bd1b73cec657b11f07ba9a920a 328 Pfam PF00676 Dehydrogenase E1 component 12 310 6.9E-76 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Acife_3082 487f01bd1b73cec657b11f07ba9a920a 328 Gene3D G3DSA:3.40.50.970 1 328 4.2E-117 T 12-10-2018 Acife_3082 487f01bd1b73cec657b11f07ba9a920a 328 SUPERFAMILY SSF52518 6 320 5.05E-93 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_3082 487f01bd1b73cec657b11f07ba9a920a 328 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 7 319 9.0E-125 T 12-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 182 188 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 21 469 9.7E-144 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 Gene3D G3DSA:3.30.360.10 182 460 2.2E-155 T 12-10-2018 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 224 241 4.1E-44 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 242 258 4.1E-44 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 148 161 4.1E-44 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 172 200 4.1E-44 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 319 345 4.1E-44 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 Gene3D G3DSA:3.40.50.720 23 424 2.2E-155 T 12-10-2018 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 24 192 3.3E-48 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 SUPERFAMILY SSF51735 14 195 4.66E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0694 07ce96f4adc5d3570993a278828e2675 477 SUPERFAMILY SSF55347 182 470 1.31E-94 T 12-10-2018 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 20 471 71.825 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 PIRSF PIRSF000110 8 474 5.3E-150 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_0694 07ce96f4adc5d3570993a278828e2675 477 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 195 469 5.9E-90 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 SMART SM00831 2 61 2.8E-4 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 677 698 7.4E-12 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 547 572 7.4E-12 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 399 417 7.4E-12 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 Pfam PF00690 Cation transporter/ATPase, N-terminus 7 50 7.6E-9 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 Pfam PF00122 E1-E2 ATPase 99 271 8.9E-43 T 12-10-2018 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 Gene3D G3DSA:3.40.1110.10 311 427 2.3E-20 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 296 302 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 145 159 1.1E-37 T 12-10-2018 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 450 460 1.1E-37 T 12-10-2018 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 1.1E-37 T 12-10-2018 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 428 439 1.1E-37 T 12-10-2018 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 294 308 1.1E-37 T 12-10-2018 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 1.1E-37 T 12-10-2018 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 68 474 1.4E-61 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 483 601 1.6E-26 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 Gene3D G3DSA:3.40.50.1000 428 578 9.9E-45 T 12-10-2018 IPR023214 HAD superfamily Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 SUPERFAMILY SSF81653 100 195 2.22E-27 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 Pfam PF00702 haloacid dehalogenase-like hydrolase 294 529 1.1E-25 T 12-10-2018 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 Gene3D G3DSA:1.20.1110.10 188 310 9.5E-20 T 12-10-2018 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 SUPERFAMILY SSF81665 5 758 2.62E-65 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 SUPERFAMILY SSF56784 293 612 7.28E-41 T 12-10-2018 IPR036412 HAD-like superfamily Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 Gene3D G3DSA:2.60.120.1500 97 187 7.4E-28 T 12-10-2018 Acife_3093 e2beb09eaab4b3540e6cb135479e7c8c 763 TIGRFAM TIGR01647 ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 8 712 3.2E-202 T 12-10-2018 IPR006534 P-type ATPase, subfamily IIIA GO:0008553|GO:0016021|GO:0120029 KEGG: 00190+3.6.3.6 Acife_1371 36e3c94a49c6560d1e62863d913b2e47 412 Pfam PF00155 Aminotransferase class I and II 52 406 2.4E-70 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Acife_1371 36e3c94a49c6560d1e62863d913b2e47 412 Gene3D G3DSA:3.90.1150.10 44 405 1.1E-128 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1371 36e3c94a49c6560d1e62863d913b2e47 412 Gene3D G3DSA:3.40.640.10 83 306 1.1E-128 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1371 36e3c94a49c6560d1e62863d913b2e47 412 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 256 269 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Acife_1371 36e3c94a49c6560d1e62863d913b2e47 412 SUPERFAMILY SSF53383 23 411 3.44E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 216 235 7.9E-20 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 241 250 7.9E-20 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 200 209 7.9E-20 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 307 315 7.9E-20 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 140 152 7.9E-20 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 157 164 7.9E-20 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 Gene3D G3DSA:3.40.50.80 205 342 5.9E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 Gene3D G3DSA:3.10.20.30 1 97 4.9E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 216 235 5.3E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 253 264 5.3E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 157 164 5.3E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 241 250 5.3E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 SUPERFAMILY SSF63380 107 210 6.99E-22 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 SUPERFAMILY SSF54292 3 98 3.01E-20 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 86 2.9E-12 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 SUPERFAMILY SSF52343 196 337 4.06E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 Pfam PF00970 Oxidoreductase FAD-binding domain 110 205 4.8E-15 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 Gene3D G3DSA:2.40.30.10 99 203 1.3E-23 T 12-10-2018 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Acife_0575 3fec15434d19ff9a82f57a1ba0a8f639 342 Pfam PF00175 Oxidoreductase NAD-binding domain 217 320 1.1E-16 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Acife_1374 c89c7f269b48dc91ecfbe020d49c25b4 325 SUPERFAMILY SSF117782 91 163 7.19E-9 T 12-10-2018 IPR035439 UPF0145 domain superfamily Acife_1374 c89c7f269b48dc91ecfbe020d49c25b4 325 Gene3D G3DSA:3.30.110.70 108 164 9.9E-6 T 12-10-2018 Acife_1374 c89c7f269b48dc91ecfbe020d49c25b4 325 Pfam PF01906 Putative heavy-metal-binding 112 161 2.6E-5 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 Acife_0094 6006a41a426c50be00c6113c395ad16d 218 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 11 215 1.7E-52 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Acife_0094 6006a41a426c50be00c6113c395ad16d 218 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 10 71 4.2E-12 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Acife_0094 6006a41a426c50be00c6113c395ad16d 218 SUPERFAMILY SSF52374 9 215 3.94E-55 T 12-10-2018 Acife_0094 6006a41a426c50be00c6113c395ad16d 218 Gene3D G3DSA:3.40.50.620 7 216 2.4E-65 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_0094 6006a41a426c50be00c6113c395ad16d 218 Pfam PF01467 Cytidylyltransferase-like 11 188 2.8E-31 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Acife_0094 6006a41a426c50be00c6113c395ad16d 218 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 7 216 30.663 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 SMART SM00869 1242 1507 3.5E-21 T 12-10-2018 IPR005546 Autotransporter beta-domain Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 SUPERFAMILY SSF51126 764 956 3.04E-10 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 819 844 1.6E-5 T 12-10-2018 IPR013425 Autotransporter-associated beta strand repeat Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 568 595 2.5E-6 T 12-10-2018 IPR013425 Autotransporter-associated beta strand repeat Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 SUPERFAMILY SSF51126 324 548 1.07E-5 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 Pfam PF03797 Autotransporter beta-domain 1245 1496 1.3E-32 T 12-10-2018 IPR005546 Autotransporter beta-domain Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 Pfam PF12951 Passenger-associated-transport-repeat 731 757 4.9E-6 T 12-10-2018 IPR013425 Autotransporter-associated beta strand repeat Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 Pfam PF12951 Passenger-associated-transport-repeat 568 592 1.4E-4 T 12-10-2018 IPR013425 Autotransporter-associated beta strand repeat Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 Pfam PF12951 Passenger-associated-transport-repeat 820 844 0.0011 T 12-10-2018 IPR013425 Autotransporter-associated beta strand repeat Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 Pfam PF12951 Passenger-associated-transport-repeat 500 520 0.1 T 12-10-2018 IPR013425 Autotransporter-associated beta strand repeat Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 Pfam PF12951 Passenger-associated-transport-repeat 892 916 3.5E-5 T 12-10-2018 IPR013425 Autotransporter-associated beta strand repeat Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 Gene3D G3DSA:2.40.128.130 1218 1516 3.5E-35 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 SUPERFAMILY SSF51126 540 798 1.16E-18 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 SUPERFAMILY SSF51126 926 1131 1.6E-12 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor Acife_1333 e6a9b2429688595ab8c861f92b6492dc 1517 SUPERFAMILY SSF103515 1206 1517 4.58E-34 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 Pfam PF00072 Response regulator receiver domain 5 114 1.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 Gene3D G3DSA:1.10.10.60 385 443 8.3E-12 T 12-10-2018 Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 Gene3D G3DSA:3.40.50.300 132 307 2.4E-61 T 12-10-2018 Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 Gene3D G3DSA:3.40.50.2300 2 131 3.8E-38 T 12-10-2018 Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 SUPERFAMILY SSF52540 137 381 5.6E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 Pfam PF00158 Sigma-54 interaction domain 137 303 3.3E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 444 1.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 407 424 1.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 SMART SM00448 3 114 1.3E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 SMART SM00382 157 300 8.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 SUPERFAMILY SSF52172 5 181 1.71E-44 T 12-10-2018 IPR011006 CheY-like superfamily Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 SUPERFAMILY SSF46689 351 443 1.58E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 Gene3D G3DSA:1.10.8.60 308 384 4.2E-23 T 12-10-2018 Acife_2488 dc4e8ccebeea4dc763852d508eed4781 456 Pfam PF02954 Bacterial regulatory protein, Fis family 401 439 7.7E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_0861 eb32ab4ac7ddcd23a10cb70ff2bf26de 233 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 19 222 8.0E-55 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Acife_0861 eb32ab4ac7ddcd23a10cb70ff2bf26de 233 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 146 161 - T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Acife_0861 eb32ab4ac7ddcd23a10cb70ff2bf26de 233 SUPERFAMILY SSF53335 27 188 3.0E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0861 eb32ab4ac7ddcd23a10cb70ff2bf26de 233 Gene3D G3DSA:3.40.50.150 12 225 2.0E-63 T 12-10-2018 Acife_0861 eb32ab4ac7ddcd23a10cb70ff2bf26de 233 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 22 220 6.4E-50 T 12-10-2018 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 SUPERFAMILY SSF81442 54 576 1.23E-151 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 Gene3D G3DSA:1.20.210.10 41 584 7.5E-161 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 167 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 116 139 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 449 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 58 83 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 318 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 197 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 402 420 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 235 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 367 388 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 246 265 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 343 358 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 PRINTS PR01165 Cytochrome c oxidase subunit I signature 479 500 1.8E-77 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 299 353 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1016 4aa09da80d75aefb3fe616883d3548f6 677 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 67 519 2.2E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0960 f8cb5a97f12ed4bea3c76df9984fba2e 258 Pfam PF13616 PPIC-type PPIASE domain 123 216 2.3E-23 T 12-10-2018 Acife_0960 f8cb5a97f12ed4bea3c76df9984fba2e 258 SUPERFAMILY SSF109998 23 156 3.3E-16 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Acife_0960 f8cb5a97f12ed4bea3c76df9984fba2e 258 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 155 176 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Acife_0960 f8cb5a97f12ed4bea3c76df9984fba2e 258 Gene3D G3DSA:3.10.50.40 121 244 6.9E-28 T 12-10-2018 Acife_0960 f8cb5a97f12ed4bea3c76df9984fba2e 258 SUPERFAMILY SSF54534 127 214 1.64E-23 T 12-10-2018 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 67 521 8.2E-115 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 299 353 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 235 4.2E-74 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 58 83 4.2E-74 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 246 265 4.2E-74 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 343 358 4.2E-74 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 318 4.2E-74 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 367 388 4.2E-74 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 116 139 4.2E-74 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 479 500 4.2E-74 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 402 420 4.2E-74 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 449 4.2E-74 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 167 4.2E-74 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 Gene3D G3DSA:1.20.210.10 40 583 5.0E-162 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1029 5f84c5b832a3701b34eb32251669d198 715 SUPERFAMILY SSF81442 54 576 5.49E-144 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1502 072a997438997373b637f91ee56730e5 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 97 21.029 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Acife_1502 072a997438997373b637f91ee56730e5 107 Gene3D G3DSA:3.30.1310.10 1 107 6.3E-40 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Acife_1502 072a997438997373b637f91ee56730e5 107 SUPERFAMILY SSF82607 9 103 4.71E-33 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Acife_1502 072a997438997373b637f91ee56730e5 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 103 2.4E-29 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Acife_1502 072a997438997373b637f91ee56730e5 107 PIRSF PIRSF004555 1 107 5.2E-37 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Acife_1502 072a997438997373b637f91ee56730e5 107 Pfam PF02575 YbaB/EbfC DNA-binding family 9 99 1.6E-33 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Acife_2774 51be7c99246a70b5927a08ffb92a07b2 103 Pfam PF12674 Putative zinc ribbon domain 20 98 7.7E-24 T 12-10-2018 IPR025868 Putative zinc ribbon domain Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 163 172 1.3E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 297 315 1.3E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 377 399 1.3E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 74 91 1.3E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 SUPERFAMILY SSF51419 26 281 3.63E-78 T 12-10-2018 IPR029066 PLP-binding barrel Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 367 3.1E-27 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 Gene3D G3DSA:2.40.37.10 14 404 1.7E-148 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 409 2.0E-155 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 189 202 6.1E-23 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 56 74 6.1E-23 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 367 380 6.1E-23 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 6.1E-23 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 76 88 6.1E-23 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 410 41.56 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 Gene3D G3DSA:3.20.20.10 34 274 1.7E-148 T 12-10-2018 IPR029066 PLP-binding barrel Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 278 1.2E-64 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Acife_0222 ff1b5c7cf85cc6d4d34d1e3445dd2efd 414 SUPERFAMILY SSF50621 252 411 1.32E-52 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Acife_2199 43e79c6109c90c17f7ee560e5a3d14d0 203 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 203 41.352 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Acife_2199 43e79c6109c90c17f7ee560e5a3d14d0 203 Gene3D G3DSA:3.20.20.70 1 203 1.7E-68 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2199 43e79c6109c90c17f7ee560e5a3d14d0 203 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 198 2.2E-44 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Acife_2199 43e79c6109c90c17f7ee560e5a3d14d0 203 SUPERFAMILY SSF51366 3 201 3.45E-60 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Acife_2683 75a58905e93373637395d40f65510d24 339 SMART SM00662 22 230 3.3E-76 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2683 75a58905e93373637395d40f65510d24 339 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 248 305 1.3E-23 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2683 75a58905e93373637395d40f65510d24 339 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 9.0E-28 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2683 75a58905e93373637395d40f65510d24 339 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 4 315 33.595 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2683 75a58905e93373637395d40f65510d24 339 SUPERFAMILY SSF55257 8 228 1.26E-23 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2683 75a58905e93373637395d40f65510d24 339 SUPERFAMILY SSF56553 52 174 3.14E-36 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2683 75a58905e93373637395d40f65510d24 339 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 153 3.8E-20 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2683 75a58905e93373637395d40f65510d24 339 Gene3D G3DSA:2.170.120.12 52 173 2.4E-74 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2683 75a58905e93373637395d40f65510d24 339 Gene3D G3DSA:1.10.150.20 243 325 9.4E-34 T 12-10-2018 Acife_2683 75a58905e93373637395d40f65510d24 339 SUPERFAMILY SSF47789 249 323 1.44E-25 T 12-10-2018 Acife_2683 75a58905e93373637395d40f65510d24 339 Gene3D G3DSA:3.30.1360.10 16 224 2.4E-74 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2683 75a58905e93373637395d40f65510d24 339 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 23 314 6.2E-101 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2683 75a58905e93373637395d40f65510d24 339 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 223 3.3E-17 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_0661 66a2af220eb65829951f1bdf8898bfe5 778 SUPERFAMILY SSF56935 82 777 4.68E-59 T 12-10-2018 Acife_0661 66a2af220eb65829951f1bdf8898bfe5 778 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 155 9.7E-8 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Acife_0661 66a2af220eb65829951f1bdf8898bfe5 778 Gene3D G3DSA:2.170.130.10 71 194 1.3E-7 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Acife_0661 66a2af220eb65829951f1bdf8898bfe5 778 Pfam PF00593 TonB dependent receptor 350 775 3.3E-29 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Acife_2533 c9a3146e57cdabb1133fbfe2677674a4 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 93 2.6E-39 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Acife_2533 c9a3146e57cdabb1133fbfe2677674a4 99 Pfam PF00216 Bacterial DNA-binding protein 3 92 5.4E-30 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2533 c9a3146e57cdabb1133fbfe2677674a4 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Acife_2533 c9a3146e57cdabb1133fbfe2677674a4 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 27.639 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Acife_2533 c9a3146e57cdabb1133fbfe2677674a4 99 SMART SM00411 3 92 4.2E-37 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2533 c9a3146e57cdabb1133fbfe2677674a4 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.1E-13 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2533 c9a3146e57cdabb1133fbfe2677674a4 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.1E-13 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2533 c9a3146e57cdabb1133fbfe2677674a4 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.1E-13 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2533 c9a3146e57cdabb1133fbfe2677674a4 99 SUPERFAMILY SSF47729 3 94 4.42E-31 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_2533 c9a3146e57cdabb1133fbfe2677674a4 99 Gene3D G3DSA:4.10.520.10 1 98 2.4E-34 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_2636 bd04b0371075436f50be038c7314afda 388 SUPERFAMILY SSF53383 4 384 1.41E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_2636 bd04b0371075436f50be038c7314afda 388 Gene3D G3DSA:3.40.640.10 46 293 4.1E-140 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_2636 bd04b0371075436f50be038c7314afda 388 Pfam PF00202 Aminotransferase class-III 10 381 1.7E-110 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Acife_2636 bd04b0371075436f50be038c7314afda 388 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 3 383 1.4E-138 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Acife_2636 bd04b0371075436f50be038c7314afda 388 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 2 387 69.796 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Acife_2636 bd04b0371075436f50be038c7314afda 388 PIRSF PIRSF000521 159 387 2.1E-37 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Acife_2636 bd04b0371075436f50be038c7314afda 388 PIRSF PIRSF000521 4 145 4.9E-12 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Acife_2636 bd04b0371075436f50be038c7314afda 388 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 210 248 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Acife_2636 bd04b0371075436f50be038c7314afda 388 Gene3D G3DSA:3.90.1150.10 11 376 4.1E-140 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1138 1e8197c815418be9a94da7826c50b2b3 290 SMART SM00382 78 200 3.8E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1138 1e8197c815418be9a94da7826c50b2b3 290 Gene3D G3DSA:3.40.50.300 49 192 2.3E-7 T 12-10-2018 Acife_1138 1e8197c815418be9a94da7826c50b2b3 290 SUPERFAMILY SSF52540 52 191 1.38E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1138 1e8197c815418be9a94da7826c50b2b3 290 Pfam PF05673 Protein of unknown function (DUF815) 29 281 2.6E-96 T 12-10-2018 IPR008533 Domain of unknown function DUF815 Acife_0518 db47df63ca07026ffbd078f4187fec4c 909 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 44 308 9.8E-65 T 12-10-2018 IPR014059 Conjugative relaxase, N-terminal Acife_0518 db47df63ca07026ffbd078f4187fec4c 909 SUPERFAMILY SSF52540 434 594 2.05E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0518 db47df63ca07026ffbd078f4187fec4c 909 Gene3D G3DSA:3.40.50.300 427 603 3.8E-41 T 12-10-2018 Acife_0518 db47df63ca07026ffbd078f4187fec4c 909 Gene3D G3DSA:2.30.30.940 689 793 3.8E-41 T 12-10-2018 Acife_0518 db47df63ca07026ffbd078f4187fec4c 909 Pfam PF08751 TrwC relaxase 33 304 1.5E-78 T 12-10-2018 IPR014862 TrwC relaxase Acife_0518 db47df63ca07026ffbd078f4187fec4c 909 SUPERFAMILY SSF52540 560 843 5.63E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0518 db47df63ca07026ffbd078f4187fec4c 909 Gene3D G3DSA:3.40.50.300 604 839 3.8E-41 T 12-10-2018 Acife_0518 db47df63ca07026ffbd078f4187fec4c 909 Pfam PF13604 AAA domain 438 641 3.4E-48 T 12-10-2018 Acife_0518 db47df63ca07026ffbd078f4187fec4c 909 SUPERFAMILY SSF55464 44 318 1.37E-71 T 12-10-2018 Acife_0606 b60735f93e1c47d3efb514914fc65a5f 1138 Gene3D G3DSA:3.20.20.80 26 476 4.5E-214 T 12-10-2018 Acife_0606 b60735f93e1c47d3efb514914fc65a5f 1138 Gene3D G3DSA:2.60.40.1180 481 575 4.2E-29 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Acife_0606 b60735f93e1c47d3efb514914fc65a5f 1138 Gene3D G3DSA:3.90.400.10 124 194 4.5E-214 T 12-10-2018 Acife_0606 b60735f93e1c47d3efb514914fc65a5f 1138 Pfam PF00128 Alpha amylase, catalytic domain 49 402 2.4E-71 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Acife_0606 b60735f93e1c47d3efb514914fc65a5f 1138 Gene3D G3DSA:3.90.1200.10 835 1098 5.7E-20 T 12-10-2018 Acife_0606 b60735f93e1c47d3efb514914fc65a5f 1138 Pfam PF16657 Maltogenic Amylase, C-terminal domain 481 556 7.6E-25 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal Acife_0606 b60735f93e1c47d3efb514914fc65a5f 1138 SMART SM00642 34 433 4.2E-100 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Acife_0606 b60735f93e1c47d3efb514914fc65a5f 1138 SUPERFAMILY SSF51445 25 478 7.55E-126 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Acife_0606 b60735f93e1c47d3efb514914fc65a5f 1138 SUPERFAMILY SSF51011 486 561 7.12E-13 T 12-10-2018 Acife_0606 b60735f93e1c47d3efb514914fc65a5f 1138 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 26 561 2.2E-278 T 12-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 Acife_2674 98a58cda174588aac4b935d43b7deace 125 Gene3D G3DSA:3.40.1260.10 1 123 3.2E-32 T 12-10-2018 IPR027396 DsrEFH-like Acife_2674 98a58cda174588aac4b935d43b7deace 125 SUPERFAMILY SSF75169 8 119 1.26E-15 T 12-10-2018 IPR027396 DsrEFH-like Acife_2674 98a58cda174588aac4b935d43b7deace 125 Pfam PF13686 DsrE/DsrF/DrsH-like family 65 120 2.9E-9 T 12-10-2018 IPR032836 DsrE2-like family Acife_1311 700a8fbb7e07d8ccfcaf81ae7103ee9f 375 Pfam PF02684 Lipid-A-disaccharide synthetase 5 337 5.5E-88 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Acife_1311 700a8fbb7e07d8ccfcaf81ae7103ee9f 375 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 339 1.6E-79 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Acife_1311 700a8fbb7e07d8ccfcaf81ae7103ee9f 375 SUPERFAMILY SSF53756 22 292 1.14E-25 T 12-10-2018 Acife_1909 6e368e13ffd8d1768968d0ca1f6d4faa 317 Gene3D G3DSA:3.30.450.90 20 122 5.8E-10 T 12-10-2018 Acife_1909 6e368e13ffd8d1768968d0ca1f6d4faa 317 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 12 313 2.3E-116 T 12-10-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 Acife_1909 6e368e13ffd8d1768968d0ca1f6d4faa 317 SUPERFAMILY SSF52540 14 294 7.08E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1909 6e368e13ffd8d1768968d0ca1f6d4faa 317 Pfam PF00437 Type II/IV secretion system protein 25 294 6.2E-70 T 12-10-2018 IPR001482 Type II/IV secretion system protein Acife_1909 6e368e13ffd8d1768968d0ca1f6d4faa 317 Gene3D G3DSA:3.40.50.300 123 317 3.6E-50 T 12-10-2018 Acife_1252 1a8a5561e0561c851b3c30c4059d4c27 202 Gene3D G3DSA:2.170.120.20 99 196 6.2E-22 T 12-10-2018 IPR037121 Ribosomal protein L25, C-terminal Acife_1252 1a8a5561e0561c851b3c30c4059d4c27 202 SUPERFAMILY SSF50715 4 195 4.19E-50 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Acife_1252 1a8a5561e0561c851b3c30c4059d4c27 202 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 26 96 1.0E-10 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Acife_1252 1a8a5561e0561c851b3c30c4059d4c27 202 Pfam PF01386 Ribosomal L25p family 6 93 7.9E-25 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Acife_1252 1a8a5561e0561c851b3c30c4059d4c27 202 Gene3D G3DSA:2.40.240.10 2 96 4.1E-26 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Acife_1252 1a8a5561e0561c851b3c30c4059d4c27 202 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 96 21.301 T 12-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Acife_1252 1a8a5561e0561c851b3c30c4059d4c27 202 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 186 27.984 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Acife_1252 1a8a5561e0561c851b3c30c4059d4c27 202 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 183 5.2E-39 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Acife_1252 1a8a5561e0561c851b3c30c4059d4c27 202 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 189 3.6E-24 T 12-10-2018 IPR020057 Ribosomal protein L25, beta domain Acife_2514 e832b61be2670ea7f1eab5b91c30c38e 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 9.0E-31 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2514 e832b61be2670ea7f1eab5b91c30c38e 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 9.0E-31 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2514 e832b61be2670ea7f1eab5b91c30c38e 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 51 63 9.0E-31 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2514 e832b61be2670ea7f1eab5b91c30c38e 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 9.0E-31 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2514 e832b61be2670ea7f1eab5b91c30c38e 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 9.0E-31 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2514 e832b61be2670ea7f1eab5b91c30c38e 694 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 5 692 7.3E-203 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2514 e832b61be2670ea7f1eab5b91c30c38e 694 SUPERFAMILY SSF109604 344 532 1.94E-15 T 12-10-2018 Acife_2514 e832b61be2670ea7f1eab5b91c30c38e 694 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 552 5.7E-188 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2514 e832b61be2670ea7f1eab5b91c30c38e 694 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 691 23.556 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2435 4e9b4f3b39a7ae987e2b9af7f911c725 224 Gene3D G3DSA:3.30.420.40 97 183 1.2E-64 T 12-10-2018 Acife_2435 4e9b4f3b39a7ae987e2b9af7f911c725 224 Gene3D G3DSA:3.30.420.40 7 216 1.2E-64 T 12-10-2018 Acife_2435 4e9b4f3b39a7ae987e2b9af7f911c725 224 SUPERFAMILY SSF53067 6 105 5.57E-28 T 12-10-2018 Acife_2435 4e9b4f3b39a7ae987e2b9af7f911c725 224 Pfam PF00814 Glycoprotease family 32 124 1.6E-27 T 12-10-2018 IPR000905 Gcp-like domain Acife_2435 4e9b4f3b39a7ae987e2b9af7f911c725 224 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 6 215 4.1E-57 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Acife_2435 4e9b4f3b39a7ae987e2b9af7f911c725 224 SUPERFAMILY SSF53067 108 213 1.09E-17 T 12-10-2018 Acife_0557 95456969d24fff760533ad9807318f00 223 SUPERFAMILY SSF52540 1 217 3.5E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0557 95456969d24fff760533ad9807318f00 223 SMART SM00382 27 214 5.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0557 95456969d24fff760533ad9807318f00 223 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_0557 95456969d24fff760533ad9807318f00 223 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.7E-86 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Acife_0557 95456969d24fff760533ad9807318f00 223 Gene3D G3DSA:3.40.50.300 1 222 4.1E-64 T 12-10-2018 Acife_0557 95456969d24fff760533ad9807318f00 223 Pfam PF00005 ABC transporter 18 165 3.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_0325 c47c2780606c48493276c21769626e0b 354 SUPERFAMILY SSF51445 13 297 2.53E-81 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Acife_0325 c47c2780606c48493276c21769626e0b 354 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 17 298 2.4E-70 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Acife_0325 c47c2780606c48493276c21769626e0b 354 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 248 265 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Acife_0325 c47c2780606c48493276c21769626e0b 354 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 14 351 45.798 T 12-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Acife_0325 c47c2780606c48493276c21769626e0b 354 Gene3D G3DSA:3.20.20.300 11 350 3.0E-110 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Acife_0647 c465e005437866fa1a909e7c6496da19 346 Gene3D G3DSA:3.20.20.140 9 343 2.7E-98 T 12-10-2018 Acife_0647 c465e005437866fa1a909e7c6496da19 346 Hamap MF_01962 Adenine deaminase. 14 325 74.951 T 12-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Acife_0647 c465e005437866fa1a909e7c6496da19 346 Pfam PF00962 Adenosine/AMP deaminase 18 333 1.2E-68 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Acife_0647 c465e005437866fa1a909e7c6496da19 346 SUPERFAMILY SSF51556 13 334 1.14E-78 T 12-10-2018 IPR032466 Metal-dependent hydrolase Acife_0647 c465e005437866fa1a909e7c6496da19 346 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 18 334 6.3E-103 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 Acife_1308 6fb91678f934d09ed9b0a0869420b11f 260 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 5 257 9.0E-104 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Acife_1308 6fb91678f934d09ed9b0a0869420b11f 260 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 2 259 45.46 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Acife_1308 6fb91678f934d09ed9b0a0869420b11f 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 49 2.4E-12 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_1308 6fb91678f934d09ed9b0a0869420b11f 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 139 1.1E-5 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_1308 6fb91678f934d09ed9b0a0869420b11f 260 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 177 257 5.1E-29 T 12-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Acife_1308 6fb91678f934d09ed9b0a0869420b11f 260 Gene3D G3DSA:2.160.10.10 1 192 5.8E-51 T 12-10-2018 Acife_1308 6fb91678f934d09ed9b0a0869420b11f 260 PIRSF PIRSF000456 1 260 3.6E-105 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Acife_1308 6fb91678f934d09ed9b0a0869420b11f 260 Gene3D G3DSA:1.20.1180.10 194 259 3.7E-22 T 12-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Acife_1308 6fb91678f934d09ed9b0a0869420b11f 260 SUPERFAMILY SSF51161 3 259 6.78E-77 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Acife_2780 8d5628ccf94f6b16e10c5af3afe7abc3 239 Gene3D G3DSA:3.40.630.70 66 238 2.5E-62 T 12-10-2018 Acife_2780 8d5628ccf94f6b16e10c5af3afe7abc3 239 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 239 87.301 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Acife_2780 8d5628ccf94f6b16e10c5af3afe7abc3 239 Gene3D G3DSA:2.30.210.20 10 65 1.6E-22 T 12-10-2018 Acife_2780 8d5628ccf94f6b16e10c5af3afe7abc3 239 SUPERFAMILY SSF55729 14 228 2.33E-84 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_2780 8d5628ccf94f6b16e10c5af3afe7abc3 239 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 219 2.1E-57 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Acife_2780 8d5628ccf94f6b16e10c5af3afe7abc3 239 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 40 208 3.5E-71 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Acife_0658 af1dab220d4b7e588071d60753bb7145 202 SUPERFAMILY SSF53448 3 138 2.48E-16 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0658 af1dab220d4b7e588071d60753bb7145 202 Gene3D G3DSA:3.90.550.10 3 195 2.5E-22 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0658 af1dab220d4b7e588071d60753bb7145 202 Pfam PF12804 MobA-like NTP transferase domain 4 162 4.9E-24 T 12-10-2018 IPR025877 MobA-like NTP transferase Acife_0255 28d2a5ef55c00cad9fa467e6d05c6b3e 248 Pfam PF00227 Proteasome subunit 8 189 1.2E-5 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Acife_0255 28d2a5ef55c00cad9fa467e6d05c6b3e 248 PIRSF PIRSF009120 1 247 1.4E-93 T 12-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 Acife_0255 28d2a5ef55c00cad9fa467e6d05c6b3e 248 Gene3D G3DSA:3.60.20.10 2 208 5.4E-24 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Acife_0255 28d2a5ef55c00cad9fa467e6d05c6b3e 248 SUPERFAMILY SSF56235 2 241 3.09E-30 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Acife_0022 237cd192efe46b112ae129afcbec5201 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 511 3.3E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Acife_0022 237cd192efe46b112ae129afcbec5201 547 Gene3D G3DSA:1.10.287.950 309 547 2.8E-48 T 12-10-2018 Acife_0022 237cd192efe46b112ae129afcbec5201 547 SUPERFAMILY SSF58104 238 547 7.32E-67 T 12-10-2018 Acife_0022 237cd192efe46b112ae129afcbec5201 547 Pfam PF00672 HAMP domain 218 266 1.1E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_0022 237cd192efe46b112ae129afcbec5201 547 SMART SM00304 218 270 4.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_0022 237cd192efe46b112ae129afcbec5201 547 SMART SM00304 312 365 58.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_0022 237cd192efe46b112ae129afcbec5201 547 Gene3D G3DSA:1.20.1480.50 179 274 2.6E-15 T 12-10-2018 Acife_0022 237cd192efe46b112ae129afcbec5201 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 194 214 3.9E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Acife_0022 237cd192efe46b112ae129afcbec5201 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 3.9E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Acife_0022 237cd192efe46b112ae129afcbec5201 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 3.9E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Acife_0022 237cd192efe46b112ae129afcbec5201 547 SMART SM00283 285 546 9.4E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Acife_3133 23207df9365bc23699545fd297d44570 267 Pfam PF07728 AAA domain (dynein-related subfamily) 36 169 1.8E-29 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Acife_3133 23207df9365bc23699545fd297d44570 267 SUPERFAMILY SSF52540 24 224 2.4E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3133 23207df9365bc23699545fd297d44570 267 Gene3D G3DSA:3.40.50.300 20 187 2.8E-28 T 12-10-2018 Acife_3133 23207df9365bc23699545fd297d44570 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 182 264 4.2E-31 T 12-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Acife_2652 64c02912e251982a7f934c1bd79122f6 153 Pfam PF17384 RimP C-terminal SH3 domain 88 153 5.4E-11 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Acife_2652 64c02912e251982a7f934c1bd79122f6 153 SUPERFAMILY SSF75420 3 85 1.27E-20 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily Acife_2652 64c02912e251982a7f934c1bd79122f6 153 Pfam PF02576 RimP N-terminal domain 13 85 3.7E-23 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Acife_2652 64c02912e251982a7f934c1bd79122f6 153 SUPERFAMILY SSF74942 86 153 9.42E-14 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Acife_2652 64c02912e251982a7f934c1bd79122f6 153 Gene3D G3DSA:3.30.300.70 2 82 7.1E-18 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily Acife_2652 64c02912e251982a7f934c1bd79122f6 153 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 153 21.964 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Acife_0733 c0fd9ba61911e71c56f2b8650fb0f7e5 182 Gene3D G3DSA:1.10.490.10 7 165 2.2E-28 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Acife_0733 c0fd9ba61911e71c56f2b8650fb0f7e5 182 SUPERFAMILY SSF46458 9 146 1.51E-20 T 12-10-2018 IPR009050 Globin-like superfamily Acife_0733 c0fd9ba61911e71c56f2b8650fb0f7e5 182 Pfam PF11563 Protoglobin 10 160 5.1E-20 T 12-10-2018 Acife_3253 6c8d20960b0cfedf504405427886a3eb 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 1.0E-144 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Acife_3253 6c8d20960b0cfedf504405427886a3eb 294 Gene3D G3DSA:3.90.550.10 1 293 6.7E-79 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3253 6c8d20960b0cfedf504405427886a3eb 294 SUPERFAMILY SSF53448 1 288 4.06E-86 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3253 6c8d20960b0cfedf504405427886a3eb 294 Pfam PF00483 Nucleotidyl transferase 4 239 1.6E-63 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Acife_2404 d476d5b82e41fbee2ecd59a996e00b40 912 SMART SM00487 150 328 1.3E-17 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_2404 d476d5b82e41fbee2ecd59a996e00b40 912 Gene3D G3DSA:3.40.50.300 323 546 7.6E-55 T 12-10-2018 Acife_2404 d476d5b82e41fbee2ecd59a996e00b40 912 Pfam PF04851 Type III restriction enzyme, res subunit 155 301 2.7E-31 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Acife_2404 d476d5b82e41fbee2ecd59a996e00b40 912 Pfam PF08463 EcoEI R protein C-terminal 752 907 8.3E-20 T 12-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 Acife_2404 d476d5b82e41fbee2ecd59a996e00b40 912 Gene3D G3DSA:3.40.50.300 137 314 1.5E-49 T 12-10-2018 Acife_2404 d476d5b82e41fbee2ecd59a996e00b40 912 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 25 116 3.8E-8 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Acife_2404 d476d5b82e41fbee2ecd59a996e00b40 912 Gene3D G3DSA:3.90.1570.30 2 136 1.2E-30 T 12-10-2018 Acife_2404 d476d5b82e41fbee2ecd59a996e00b40 912 SUPERFAMILY SSF52540 174 514 2.0E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2404 d476d5b82e41fbee2ecd59a996e00b40 912 Pfam PF00271 Helicase conserved C-terminal domain 411 510 1.2E-6 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_2679 3ebbaa82817dda775f7730299abb4b01 224 Gene3D G3DSA:1.10.150.20 28 87 4.0E-5 T 12-10-2018 Acife_2679 3ebbaa82817dda775f7730299abb4b01 224 Pfam PF04002 RadC-like JAB domain 104 222 4.9E-42 T 12-10-2018 IPR025657 RadC-like JAB domain Acife_2679 3ebbaa82817dda775f7730299abb4b01 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Acife_2679 3ebbaa82817dda775f7730299abb4b01 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 222 6.8E-72 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 Acife_2679 3ebbaa82817dda775f7730299abb4b01 224 SUPERFAMILY SSF102712 122 201 5.36E-6 T 12-10-2018 Acife_2679 3ebbaa82817dda775f7730299abb4b01 224 Gene3D G3DSA:3.40.140.10 101 223 4.2E-41 T 12-10-2018 Acife_2679 3ebbaa82817dda775f7730299abb4b01 224 SUPERFAMILY SSF47781 15 90 1.43E-10 T 12-10-2018 IPR010994 RuvA domain 2-like Acife_1251 a68882baac4ce49f4b2395f59136903a 189 Pfam PF01195 Peptidyl-tRNA hydrolase 4 185 8.2E-51 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Acife_1251 a68882baac4ce49f4b2395f59136903a 189 Gene3D G3DSA:3.40.50.1470 2 189 3.2E-61 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Acife_1251 a68882baac4ce49f4b2395f59136903a 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 180 32.241 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Acife_1251 a68882baac4ce49f4b2395f59136903a 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 176 2.3E-55 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Acife_1251 a68882baac4ce49f4b2395f59136903a 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Acife_1251 a68882baac4ce49f4b2395f59136903a 189 SUPERFAMILY SSF53178 3 187 7.19E-62 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Acife_0018 dcdd437448afe88924d02a8ddaedb54b 132 Pfam PF14334 Domain of unknown function (DUF4390) 61 125 8.1E-7 T 12-10-2018 IPR025500 Protein of unknown function DUF4390 Acife_1309 f79d9dd358cfbe252e1bd6e8e9d75ecb 313 Gene3D G3DSA:3.30.360.10 119 301 5.7E-64 T 12-10-2018 Acife_1309 f79d9dd358cfbe252e1bd6e8e9d75ecb 313 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 118 3.7E-28 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Acife_1309 f79d9dd358cfbe252e1bd6e8e9d75ecb 313 SUPERFAMILY SSF51735 4 131 4.66E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1309 f79d9dd358cfbe252e1bd6e8e9d75ecb 313 Gene3D G3DSA:3.40.50.720 5 288 5.7E-64 T 12-10-2018 Acife_1309 f79d9dd358cfbe252e1bd6e8e9d75ecb 313 SUPERFAMILY SSF55347 124 271 3.14E-13 T 12-10-2018 Acife_1271 75df29b3c09d5c8e11e80cbc99b4676b 235 TIGRFAM TIGR03468 HpnG: hopanoid-associated phosphorylase 19 225 1.6E-61 T 12-10-2018 IPR017831 Hopanoid-associated phosphorylase HpnG Acife_1271 75df29b3c09d5c8e11e80cbc99b4676b 235 Gene3D G3DSA:3.40.50.1580 2 184 1.4E-20 T 12-10-2018 Acife_1271 75df29b3c09d5c8e11e80cbc99b4676b 235 SUPERFAMILY SSF53167 5 177 1.7E-25 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Acife_1271 75df29b3c09d5c8e11e80cbc99b4676b 235 Pfam PF01048 Phosphorylase superfamily 35 173 1.1E-18 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 Gene3D G3DSA:2.130.10.10 342 498 4.2E-21 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 Gene3D G3DSA:2.130.10.10 116 341 7.7E-34 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 SMART SM00564 238 270 56.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 SMART SM00564 429 460 1.1 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 SMART SM00564 325 369 45.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 SMART SM00564 173 230 27.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 SMART SM00564 279 312 2.6 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 SMART SM00564 131 163 1.3 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 Pfam PF01011 PQQ enzyme repeat 137 167 7.8E-6 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 SUPERFAMILY SSF50998 124 186 4.97E-7 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 SUPERFAMILY SSF50998 172 489 2.69E-37 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 Pfam PF13360 PQQ-like domain 212 317 5.2E-13 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Acife_0037 c5e6bb54696b1ebf9ae480dcfe8f97e1 503 Pfam PF13360 PQQ-like domain 354 463 1.2E-10 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Acife_2050 b08a45a5d016fd64f6d7518f136d0d0c 133 SMART SM00463 19 96 1.1E-6 T 12-10-2018 IPR002625 Smr domain Acife_2050 b08a45a5d016fd64f6d7518f136d0d0c 133 Gene3D G3DSA:3.30.1370.110 14 95 7.7E-18 T 12-10-2018 Acife_2050 b08a45a5d016fd64f6d7518f136d0d0c 133 SUPERFAMILY SSF160443 20 74 2.75E-9 T 12-10-2018 IPR036063 Smr domain superfamily Acife_2050 b08a45a5d016fd64f6d7518f136d0d0c 133 Pfam PF01713 Smr domain 22 94 5.2E-15 T 12-10-2018 IPR002625 Smr domain Acife_0132 9dca331c8819b97681c3969eaead4197 192 Pfam PF00691 OmpA family 86 180 2.3E-17 T 12-10-2018 IPR006665 OmpA-like domain Acife_0132 9dca331c8819b97681c3969eaead4197 192 PRINTS PR01021 OMPA domain signature 116 131 5.6E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Acife_0132 9dca331c8819b97681c3969eaead4197 192 PRINTS PR01021 OMPA domain signature 131 147 5.6E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Acife_0132 9dca331c8819b97681c3969eaead4197 192 PRINTS PR01021 OMPA domain signature 86 108 5.6E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Acife_0132 9dca331c8819b97681c3969eaead4197 192 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 4 186 28.277 T 12-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 Acife_0132 9dca331c8819b97681c3969eaead4197 192 Gene3D G3DSA:3.30.1330.60 67 186 1.2E-35 T 12-10-2018 IPR036737 OmpA-like domain superfamily Acife_0132 9dca331c8819b97681c3969eaead4197 192 ProSitePatterns PS01068 OmpA-like domain. 118 162 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Acife_0132 9dca331c8819b97681c3969eaead4197 192 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 83 186 1.5E-41 T 12-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 Acife_0132 9dca331c8819b97681c3969eaead4197 192 SUPERFAMILY SSF103088 81 186 8.37E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily Acife_0313 95cce88d44ff1987eb06bb3cbbf2a729 435 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 20 428 50.263 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Acife_0313 95cce88d44ff1987eb06bb3cbbf2a729 435 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 115 123 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Acife_0313 95cce88d44ff1987eb06bb3cbbf2a729 435 Pfam PF00483 Nucleotidyl transferase 25 293 3.1E-62 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Acife_0313 95cce88d44ff1987eb06bb3cbbf2a729 435 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 213 223 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Acife_0313 95cce88d44ff1987eb06bb3cbbf2a729 435 Gene3D G3DSA:2.160.10.10 305 432 2.6E-35 T 12-10-2018 Acife_0313 95cce88d44ff1987eb06bb3cbbf2a729 435 SUPERFAMILY SSF51161 314 416 1.3E-16 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Acife_0313 95cce88d44ff1987eb06bb3cbbf2a729 435 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 29 48 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Acife_0313 95cce88d44ff1987eb06bb3cbbf2a729 435 Gene3D G3DSA:3.90.550.10 13 304 9.0E-84 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0313 95cce88d44ff1987eb06bb3cbbf2a729 435 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 23 402 6.1E-149 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Acife_0313 95cce88d44ff1987eb06bb3cbbf2a729 435 SUPERFAMILY SSF53448 20 382 1.24E-74 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2736 06e769d3eee5b8a2a1a650570e5e49af 414 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Acife_2736 06e769d3eee5b8a2a1a650570e5e49af 414 Pfam PF00464 Serine hydroxymethyltransferase 9 380 8.2E-174 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Acife_2736 06e769d3eee5b8a2a1a650570e5e49af 414 PIRSF PIRSF000412 1 414 7.7E-165 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Acife_2736 06e769d3eee5b8a2a1a650570e5e49af 414 SUPERFAMILY SSF53383 6 413 4.03E-174 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_2736 06e769d3eee5b8a2a1a650570e5e49af 414 Gene3D G3DSA:3.40.640.10 37 287 1.9E-181 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_2736 06e769d3eee5b8a2a1a650570e5e49af 414 Gene3D G3DSA:3.90.1150.10 10 391 1.9E-181 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_2736 06e769d3eee5b8a2a1a650570e5e49af 414 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 414 51.99 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Acife_2389 5c08be87266427a2b38a5ba11cbd9522 242 Pfam PF03725 3' exoribonuclease family, domain 2 160 225 1.8E-11 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_2389 5c08be87266427a2b38a5ba11cbd9522 242 SUPERFAMILY SSF54211 3 182 2.13E-44 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2389 5c08be87266427a2b38a5ba11cbd9522 242 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site Acife_2389 5c08be87266427a2b38a5ba11cbd9522 242 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 235 3.8E-116 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Acife_2389 5c08be87266427a2b38a5ba11cbd9522 242 SUPERFAMILY SSF55666 153 235 1.44E-25 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_2389 5c08be87266427a2b38a5ba11cbd9522 242 Hamap MF_00564 Ribonuclease PH [rph]. 12 238 44.804 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Acife_2389 5c08be87266427a2b38a5ba11cbd9522 242 Gene3D G3DSA:3.30.230.70 11 239 4.6E-64 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_2389 5c08be87266427a2b38a5ba11cbd9522 242 Pfam PF01138 3' exoribonuclease family, domain 1 12 141 9.6E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Acife_0692 e3b9abfd5ae8b7dbc71a8d707250de14 735 Pfam PF00665 Integrase core domain 292 431 8.4E-14 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_0692 e3b9abfd5ae8b7dbc71a8d707250de14 735 Pfam PF09299 Mu transposase, C-terminal 524 587 2.2E-9 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal Acife_0692 e3b9abfd5ae8b7dbc71a8d707250de14 735 Gene3D G3DSA:3.30.420.10 287 492 1.3E-14 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_2262 4d247837f11b2da6adfbd96601044e76 484 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 131 474 1.9E-114 T 12-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 Acife_2262 4d247837f11b2da6adfbd96601044e76 484 PRINTS PR00095 Anthranilate synthase component I signature 333 346 2.3E-15 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_2262 4d247837f11b2da6adfbd96601044e76 484 PRINTS PR00095 Anthranilate synthase component I signature 428 442 2.3E-15 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_2262 4d247837f11b2da6adfbd96601044e76 484 PRINTS PR00095 Anthranilate synthase component I signature 319 332 2.3E-15 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_2262 4d247837f11b2da6adfbd96601044e76 484 PRINTS PR00095 Anthranilate synthase component I signature 413 427 2.3E-15 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_2262 4d247837f11b2da6adfbd96601044e76 484 SUPERFAMILY SSF56322 27 479 1.7E-137 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Acife_2262 4d247837f11b2da6adfbd96601044e76 484 Gene3D G3DSA:3.60.120.10 28 480 5.5E-155 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Acife_2262 4d247837f11b2da6adfbd96601044e76 484 Pfam PF00425 chorismate binding enzyme 218 471 5.2E-99 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Acife_2262 4d247837f11b2da6adfbd96601044e76 484 Pfam PF04715 Anthranilate synthase component I, N terminal region 40 176 7.0E-22 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_2515 6e47e6fa00a11faecd1dfad2720969cf 179 PIRSF PIRSF004682 1 177 4.1E-56 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Acife_2515 6e47e6fa00a11faecd1dfad2720969cf 179 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 146 1.8E-33 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Acife_2515 6e47e6fa00a11faecd1dfad2720969cf 179 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 145 2.4E-44 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Acife_2515 6e47e6fa00a11faecd1dfad2720969cf 179 Gene3D G3DSA:3.40.50.1000 3 178 2.3E-54 T 12-10-2018 IPR023214 HAD superfamily Acife_2515 6e47e6fa00a11faecd1dfad2720969cf 179 Pfam PF13242 HAD-hyrolase-like 100 168 7.3E-13 T 12-10-2018 Acife_2515 6e47e6fa00a11faecd1dfad2720969cf 179 SUPERFAMILY SSF56784 3 175 3.66E-47 T 12-10-2018 IPR036412 HAD-like superfamily Acife_0936 cc4a0a851f92482dd917d285ecd85614 60 SUPERFAMILY SSF158997 1 57 1.03E-20 T 12-10-2018 Acife_0936 cc4a0a851f92482dd917d285ecd85614 60 Gene3D G3DSA:2.20.25.10 10 60 1.7E-19 T 12-10-2018 Acife_0936 cc4a0a851f92482dd917d285ecd85614 60 Pfam PF03966 Trm112p-like protein 4 42 5.5E-8 T 12-10-2018 IPR005651 Trm112-like Acife_0936 cc4a0a851f92482dd917d285ecd85614 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 56 25.355 T 12-10-2018 IPR038053 Uncharacterised protein family UPF0434 Acife_2798 847fe09fa5fa072850acdc9c9d6c14c7 358 Gene3D G3DSA:3.40.50.2000 14 162 4.8E-46 T 12-10-2018 Acife_2798 847fe09fa5fa072850acdc9c9d6c14c7 358 Gene3D G3DSA:3.40.50.2000 163 341 4.8E-46 T 12-10-2018 Acife_2798 847fe09fa5fa072850acdc9c9d6c14c7 358 Pfam PF13439 Glycosyltransferase Family 4 17 164 3.3E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Acife_2798 847fe09fa5fa072850acdc9c9d6c14c7 358 SUPERFAMILY SSF53756 7 354 4.71E-61 T 12-10-2018 Acife_2798 847fe09fa5fa072850acdc9c9d6c14c7 358 Pfam PF13692 Glycosyl transferases group 1 188 325 1.4E-17 T 12-10-2018 Acife_2907 199f8aeb27101c656e05226c2275f03a 184 SUPERFAMILY SSF56784 14 176 4.14E-36 T 12-10-2018 IPR036412 HAD-like superfamily Acife_2907 199f8aeb27101c656e05226c2275f03a 184 PIRSF PIRSF006118 6 180 3.9E-68 T 12-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Acife_2907 199f8aeb27101c656e05226c2275f03a 184 Gene3D G3DSA:3.40.50.1000 4 180 5.0E-48 T 12-10-2018 IPR023214 HAD superfamily Acife_2907 199f8aeb27101c656e05226c2275f03a 184 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 18 170 1.4E-50 T 12-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Acife_2448 673aab6fbf9cbcec66c97e8d91c4c489 247 Gene3D G3DSA:3.40.50.880 5 243 1.3E-65 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_2448 673aab6fbf9cbcec66c97e8d91c4c489 247 SUPERFAMILY SSF52317 26 233 5.5E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_2448 673aab6fbf9cbcec66c97e8d91c4c489 247 Pfam PF07722 Peptidase C26 20 212 2.8E-56 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 Acife_0544 300e5f69843899875a1a2260980ec217 315 Gene3D G3DSA:3.40.50.2020 9 302 5.8E-127 T 12-10-2018 Acife_0544 300e5f69843899875a1a2260980ec217 315 Gene3D G3DSA:3.40.50.2020 149 290 5.8E-127 T 12-10-2018 Acife_0544 300e5f69843899875a1a2260980ec217 315 SMART SM01400 6 122 3.3E-77 T 12-10-2018 Acife_0544 300e5f69843899875a1a2260980ec217 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 6 314 49.305 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Acife_0544 300e5f69843899875a1a2260980ec217 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 313 4.1E-31 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Acife_0544 300e5f69843899875a1a2260980ec217 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 122 2.5E-47 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Acife_0544 300e5f69843899875a1a2260980ec217 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 313 1.9E-122 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Acife_0544 300e5f69843899875a1a2260980ec217 315 SUPERFAMILY SSF53271 71 304 3.6E-64 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Acife_0544 300e5f69843899875a1a2260980ec217 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Acife_1137 9845c36ebc9adca6ba65d39e4da071d3 185 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 177 18.256 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Acife_1137 9845c36ebc9adca6ba65d39e4da071d3 185 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 1.5E-52 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Acife_1137 9845c36ebc9adca6ba65d39e4da071d3 185 Pfam PF04279 Intracellular septation protein A 1 176 9.2E-60 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 36.453 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 145 4.6E-24 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 1.2E-48 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 1.2E-48 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 1.2E-48 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 1.2E-48 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 1.2E-48 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 SUPERFAMILY SSF53187 182 495 1.1E-118 T 12-10-2018 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 Gene3D G3DSA:3.40.630.10 183 497 4.9E-133 T 12-10-2018 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 SUPERFAMILY SSF52949 2 183 6.47E-33 T 12-10-2018 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 188 489 6.7E-121 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 Gene3D G3DSA:3.40.220.10 1 161 4.4E-40 T 12-10-2018 Acife_1217 1f0196de86436e55081d096c71eed0a5 500 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Acife_3219 865775d1588c1c3e1a87eb06dd7d9e89 177 SUPERFAMILY SSF55729 53 169 1.95E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_3219 865775d1588c1c3e1a87eb06dd7d9e89 177 Gene3D G3DSA:3.40.630.30 14 175 5.0E-40 T 12-10-2018 Acife_3219 865775d1588c1c3e1a87eb06dd7d9e89 177 Pfam PF13673 Acetyltransferase (GNAT) domain 103 163 7.1E-9 T 12-10-2018 IPR000182 GNAT domain Acife_0482 dde42a6894b3b4e5d265c2adf3660601 172 SUPERFAMILY SSF53807 43 158 2.4E-15 T 12-10-2018 Acife_0482 dde42a6894b3b4e5d265c2adf3660601 172 Gene3D G3DSA:3.40.50.1980 53 163 6.8E-12 T 12-10-2018 Acife_0482 dde42a6894b3b4e5d265c2adf3660601 172 Pfam PF01297 Zinc-uptake complex component A periplasmic 58 120 3.6E-10 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Acife_2767 009c771c84ad9dc8baaeaf598f1a5f64 116 SMART SM01152 14 90 3.2E-32 T 12-10-2018 IPR003746 Protein of unknown function DUF167 Acife_2767 009c771c84ad9dc8baaeaf598f1a5f64 116 SUPERFAMILY SSF69786 7 96 8.24E-25 T 12-10-2018 IPR036591 YggU-like superfamily Acife_2767 009c771c84ad9dc8baaeaf598f1a5f64 116 Hamap MF_00634 UPF0235 protein YggU [yggU]. 14 101 18.207 T 12-10-2018 IPR003746 Protein of unknown function DUF167 Acife_2767 009c771c84ad9dc8baaeaf598f1a5f64 116 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 18 88 1.4E-22 T 12-10-2018 IPR003746 Protein of unknown function DUF167 Acife_2767 009c771c84ad9dc8baaeaf598f1a5f64 116 Gene3D G3DSA:3.30.1200.10 8 108 1.9E-28 T 12-10-2018 IPR036591 YggU-like superfamily Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 68 1.8E-8 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 Pfam PF00970 Oxidoreductase FAD-binding domain 107 191 6.4E-11 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 PRINTS PR00410 Phenol hydroxylase reductase family signature 291 299 5.3E-19 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 PRINTS PR00410 Phenol hydroxylase reductase family signature 202 221 5.3E-19 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 PRINTS PR00410 Phenol hydroxylase reductase family signature 186 195 5.3E-19 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 PRINTS PR00410 Phenol hydroxylase reductase family signature 124 136 5.3E-19 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 PRINTS PR00410 Phenol hydroxylase reductase family signature 227 236 5.3E-19 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 Pfam PF00175 Oxidoreductase NAD-binding domain 204 304 2.3E-16 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 Gene3D G3DSA:3.10.20.30 1 91 9.8E-18 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 Gene3D G3DSA:3.40.50.80 191 327 2.7E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 SUPERFAMILY SSF52343 196 324 7.46E-33 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 202 221 1.2E-9 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 291 299 1.2E-9 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 239 250 1.2E-9 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 227 236 1.2E-9 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 142 149 1.2E-9 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 Gene3D G3DSA:2.40.30.10 92 189 1.4E-23 T 12-10-2018 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 SUPERFAMILY SSF54292 3 88 1.84E-19 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Acife_2067 a47da553cbed4016aa3f9a7ee760015b 327 SUPERFAMILY SSF63380 97 191 2.15E-21 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Acife_1757 166072dfbf6b9b3ba0c71e79a73d4343 256 Pfam PF02565 Recombination protein O C terminal 85 233 6.3E-22 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Acife_1757 166072dfbf6b9b3ba0c71e79a73d4343 256 Pfam PF11967 Recombination protein O N terminal 7 75 5.8E-15 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Acife_1757 166072dfbf6b9b3ba0c71e79a73d4343 256 Gene3D G3DSA:2.40.50.140 4 77 1.2E-22 T 12-10-2018 Acife_1757 166072dfbf6b9b3ba0c71e79a73d4343 256 SUPERFAMILY SSF50249 6 77 1.22E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1757 166072dfbf6b9b3ba0c71e79a73d4343 256 Hamap MF_00201 DNA repair protein RecO [recO]. 3 239 21.69 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Acife_1757 166072dfbf6b9b3ba0c71e79a73d4343 256 TIGRFAM TIGR00613 reco: DNA repair protein RecO 10 183 1.1E-22 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Acife_1757 166072dfbf6b9b3ba0c71e79a73d4343 256 SUPERFAMILY SSF57863 88 219 5.23E-20 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Acife_1757 166072dfbf6b9b3ba0c71e79a73d4343 256 Gene3D G3DSA:1.20.1440.120 80 249 1.2E-32 T 12-10-2018 Acife_1636 613fa3302462bb883b2d8cc461e74e05 291 TIGRFAM TIGR02000 NifU_proper: Fe-S cluster assembly protein NifU 1 283 7.8E-137 T 12-10-2018 IPR010238 NIF system FeS cluster assembly, NifU GO:0005506|GO:0016226|GO:0051536 Acife_1636 613fa3302462bb883b2d8cc461e74e05 291 Gene3D G3DSA:1.10.10.1100 136 187 2.3E-5 T 12-10-2018 Acife_1636 613fa3302462bb883b2d8cc461e74e05 291 Pfam PF01592 NifU-like N terminal domain 4 125 4.1E-52 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Acife_1636 613fa3302462bb883b2d8cc461e74e05 291 Pfam PF01106 NifU-like domain 217 280 4.7E-18 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Acife_1636 613fa3302462bb883b2d8cc461e74e05 291 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 221 282 1.0E-14 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Acife_1636 613fa3302462bb883b2d8cc461e74e05 291 SUPERFAMILY SSF82649 2 131 1.99E-44 T 12-10-2018 Acife_1636 613fa3302462bb883b2d8cc461e74e05 291 Gene3D G3DSA:3.30.300.130 211 285 3.1E-17 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Acife_1636 613fa3302462bb883b2d8cc461e74e05 291 PIRSF PIRSF000375 1 284 7.7E-128 T 12-10-2018 IPR016217 Nitrogen fixation, NifU Acife_1636 613fa3302462bb883b2d8cc461e74e05 291 Pfam PF04324 BFD-like [2Fe-2S] binding domain 135 184 2.3E-16 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Acife_1636 613fa3302462bb883b2d8cc461e74e05 291 SUPERFAMILY SSF117916 207 283 4.14E-19 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Acife_1636 613fa3302462bb883b2d8cc461e74e05 291 Gene3D G3DSA:3.90.1010.10 1 135 2.2E-56 T 12-10-2018 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 468 58.669 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 Pfam PF00330 Aconitase family (aconitate hydratase) 8 459 2.8E-155 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 Gene3D G3DSA:3.30.499.10 326 470 1.8E-48 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 Gene3D G3DSA:3.30.499.20 5 287 2.8E-96 T 12-10-2018 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 466 1.0E-228 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 SUPERFAMILY SSF53732 3 467 1.18E-159 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 PRINTS PR00415 Aconitase family signature 196 209 1.2E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 PRINTS PR00415 Aconitase family signature 120 133 1.2E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 PRINTS PR00415 Aconitase family signature 134 149 1.2E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 PRINTS PR00415 Aconitase family signature 344 355 1.2E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 PRINTS PR00415 Aconitase family signature 109 117 1.2E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 PRINTS PR00415 Aconitase family signature 401 414 1.2E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 PRINTS PR00415 Aconitase family signature 210 223 1.2E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 PRINTS PR00415 Aconitase family signature 83 96 1.2E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 PRINTS PR00415 Aconitase family signature 287 301 1.2E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Acife_1009 e14874b13bdd04c393a7e7d8b39a2b02 470 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Acife_0554 1760369fcbc2bace7e4ab8264c7c3c14 174 Pfam PF01467 Cytidylyltransferase-like 11 139 2.2E-15 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Acife_0554 1760369fcbc2bace7e4ab8264c7c3c14 174 SUPERFAMILY SSF52374 8 162 1.13E-39 T 12-10-2018 Acife_0554 1760369fcbc2bace7e4ab8264c7c3c14 174 Gene3D G3DSA:3.40.50.620 5 167 3.2E-50 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_0554 1760369fcbc2bace7e4ab8264c7c3c14 174 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 10 162 1.8E-52 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Acife_0554 1760369fcbc2bace7e4ab8264c7c3c14 174 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 8 26 1.7E-46 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Acife_0554 1760369fcbc2bace7e4ab8264c7c3c14 174 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 55 79 1.7E-46 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Acife_0554 1760369fcbc2bace7e4ab8264c7c3c14 174 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 91 107 1.7E-46 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Acife_0554 1760369fcbc2bace7e4ab8264c7c3c14 174 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 118 140 1.7E-46 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Acife_0554 1760369fcbc2bace7e4ab8264c7c3c14 174 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 26 47 1.7E-46 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Acife_0554 1760369fcbc2bace7e4ab8264c7c3c14 174 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 8 164 32.31 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Acife_0554 1760369fcbc2bace7e4ab8264c7c3c14 174 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 62 9.6E-15 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Acife_1068 daf4b98b6b4af9b150093757fdb808d6 363 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 343 45.556 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Acife_1068 daf4b98b6b4af9b150093757fdb808d6 363 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 299 319 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Acife_1068 daf4b98b6b4af9b150093757fdb808d6 363 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 85 104 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Acife_1068 daf4b98b6b4af9b150093757fdb808d6 363 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 362 7.7E-121 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Acife_1068 daf4b98b6b4af9b150093757fdb808d6 363 Pfam PF01180 Dihydroorotate dehydrogenase 50 345 2.3E-84 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Acife_1068 daf4b98b6b4af9b150093757fdb808d6 363 Gene3D G3DSA:3.20.20.70 2 343 4.9E-124 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1068 daf4b98b6b4af9b150093757fdb808d6 363 SUPERFAMILY SSF51395 1 362 8.55E-95 T 12-10-2018 Acife_0168 1c5700913499726fae9b0f844fff9f09 313 SMART SM00382 34 219 2.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0168 1c5700913499726fae9b0f844fff9f09 313 Pfam PF00005 ABC transporter 25 168 2.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_0168 1c5700913499726fae9b0f844fff9f09 313 SUPERFAMILY SSF52540 5 229 1.96E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0168 1c5700913499726fae9b0f844fff9f09 313 Gene3D G3DSA:3.40.50.300 6 233 1.2E-71 T 12-10-2018 Acife_0168 1c5700913499726fae9b0f844fff9f09 313 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_0835 b9a8cedfe4779be016638e07519dc90a 616 Gene3D G3DSA:3.90.220.20 282 501 1.7E-25 T 12-10-2018 Acife_0835 b9a8cedfe4779be016638e07519dc90a 616 Gene3D G3DSA:3.90.220.20 1 208 6.6E-31 T 12-10-2018 Acife_0835 b9a8cedfe4779be016638e07519dc90a 616 Pfam PF01420 Type I restriction modification DNA specificity domain 5 178 3.7E-10 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Acife_0835 b9a8cedfe4779be016638e07519dc90a 616 SUPERFAMILY SSF116734 3 213 2.78E-32 T 12-10-2018 Acife_0835 b9a8cedfe4779be016638e07519dc90a 616 SUPERFAMILY SSF116734 286 510 3.76E-29 T 12-10-2018 Acife_0331 a123a899311477024872a27727a8b5fb 364 Pfam PF01168 Alanine racemase, N-terminal domain 9 225 2.7E-60 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 Gene3D G3DSA:3.20.20.10 11 223 4.1E-107 T 12-10-2018 IPR029066 PLP-binding barrel Acife_0331 a123a899311477024872a27727a8b5fb 364 SMART SM01005 239 363 4.4E-43 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 SUPERFAMILY SSF50621 233 363 5.58E-38 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Acife_0331 a123a899311477024872a27727a8b5fb 364 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 Pfam PF00842 Alanine racemase, C-terminal domain 239 361 7.8E-35 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 SUPERFAMILY SSF51419 9 240 7.59E-62 T 12-10-2018 IPR029066 PLP-binding barrel Acife_0331 a123a899311477024872a27727a8b5fb 364 PRINTS PR00992 Alanine racemase signature 272 287 5.7E-55 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 PRINTS PR00992 Alanine racemase signature 345 358 5.7E-55 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 PRINTS PR00992 Alanine racemase signature 63 81 5.7E-55 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 PRINTS PR00992 Alanine racemase signature 27 43 5.7E-55 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 PRINTS PR00992 Alanine racemase signature 198 225 5.7E-55 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 PRINTS PR00992 Alanine racemase signature 293 310 5.7E-55 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 PRINTS PR00992 Alanine racemase signature 157 168 5.7E-55 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 PRINTS PR00992 Alanine racemase signature 255 270 5.7E-55 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 PRINTS PR00992 Alanine racemase signature 123 135 5.7E-55 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 Gene3D G3DSA:2.40.37.10 9 358 4.1E-107 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Acife_0331 a123a899311477024872a27727a8b5fb 364 TIGRFAM TIGR00492 alr: alanine racemase 4 363 3.0E-95 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_0331 a123a899311477024872a27727a8b5fb 364 Hamap MF_01201 Alanine racemase. 2 363 30.527 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Pfam PF01103 Surface antigen 459 781 6.8E-60 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 35 781 1.6E-253 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Pfam PF07244 Surface antigen variable number repeat 187 274 8.0E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Pfam PF07244 Surface antigen variable number repeat 358 432 1.1E-10 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Pfam PF07244 Surface antigen variable number repeat 36 100 2.4E-5 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Pfam PF07244 Surface antigen variable number repeat 277 355 9.0E-13 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Pfam PF07244 Surface antigen variable number repeat 104 183 3.9E-8 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Gene3D G3DSA:2.40.160.50 436 781 2.3E-94 T 12-10-2018 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Gene3D G3DSA:3.10.20.310 359 435 1.5E-21 T 12-10-2018 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Gene3D G3DSA:3.10.20.310 280 354 5.9E-18 T 12-10-2018 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Gene3D G3DSA:3.10.20.310 31 102 1.2E-18 T 12-10-2018 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Gene3D G3DSA:3.10.20.310 103 183 4.1E-13 T 12-10-2018 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 781 23.308 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 PIRSF PIRSF006076 2 781 5.5E-235 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Acife_1304 a6a1cbc86df86beb4a169ed6a01113c9 781 Gene3D G3DSA:3.10.20.310 186 275 1.1E-19 T 12-10-2018 Acife_3085 7b9125f730d5656748249c42028c676c 344 Gene3D G3DSA:3.30.360.10 147 312 9.1E-128 T 12-10-2018 Acife_3085 7b9125f730d5656748249c42028c676c 344 Gene3D G3DSA:3.40.50.720 4 329 9.1E-128 T 12-10-2018 Acife_3085 7b9125f730d5656748249c42028c676c 344 SUPERFAMILY SSF55347 149 312 2.8E-51 T 12-10-2018 Acife_3085 7b9125f730d5656748249c42028c676c 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 159 315 3.7E-16 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Acife_3085 7b9125f730d5656748249c42028c676c 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Acife_3085 7b9125f730d5656748249c42028c676c 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 344 2.7E-127 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Acife_3085 7b9125f730d5656748249c42028c676c 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 338 42.421 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Acife_3085 7b9125f730d5656748249c42028c676c 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 140 5.0E-34 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Acife_3085 7b9125f730d5656748249c42028c676c 344 SUPERFAMILY SSF51735 2 173 1.52E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_3085 7b9125f730d5656748249c42028c676c 344 SMART SM00859 3 141 6.2E-53 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Acife_2197 099e3371e1e71b9e3eabaff7663ab44a 272 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_2197 099e3371e1e71b9e3eabaff7663ab44a 272 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 263 32.748 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_2197 099e3371e1e71b9e3eabaff7663ab44a 272 SUPERFAMILY SSF51366 1 250 9.42E-84 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Acife_2197 099e3371e1e71b9e3eabaff7663ab44a 272 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 258 2.0E-68 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_2197 099e3371e1e71b9e3eabaff7663ab44a 272 Gene3D G3DSA:3.20.20.70 1 269 2.6E-93 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2197 099e3371e1e71b9e3eabaff7663ab44a 272 Pfam PF00290 Tryptophan synthase alpha chain 8 256 9.6E-81 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_1319 5a62abd2a3d55efebb2dbad436056bd2 413 Pfam PF01270 Glycosyl hydrolases family 8 57 395 1.8E-58 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1319 5a62abd2a3d55efebb2dbad436056bd2 413 Gene3D G3DSA:1.50.10.10 64 412 8.8E-118 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Acife_1319 5a62abd2a3d55efebb2dbad436056bd2 413 SUPERFAMILY SSF48208 51 402 2.52E-81 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Acife_1319 5a62abd2a3d55efebb2dbad436056bd2 413 PRINTS PR00735 Glycosyl hydrolase family 8 signature 258 269 4.8E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1319 5a62abd2a3d55efebb2dbad436056bd2 413 PRINTS PR00735 Glycosyl hydrolase family 8 signature 282 291 4.8E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1319 5a62abd2a3d55efebb2dbad436056bd2 413 PRINTS PR00735 Glycosyl hydrolase family 8 signature 92 105 4.8E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1319 5a62abd2a3d55efebb2dbad436056bd2 413 PRINTS PR00735 Glycosyl hydrolase family 8 signature 220 237 4.8E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1319 5a62abd2a3d55efebb2dbad436056bd2 413 PRINTS PR00735 Glycosyl hydrolase family 8 signature 383 397 4.8E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1319 5a62abd2a3d55efebb2dbad436056bd2 413 PRINTS PR00735 Glycosyl hydrolase family 8 signature 154 172 4.8E-15 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1307 e50a5742261b34617672225e60cbc4fc 148 SUPERFAMILY SSF54637 3 140 4.3E-48 T 12-10-2018 IPR029069 HotDog domain superfamily Acife_1307 e50a5742261b34617672225e60cbc4fc 148 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 4 145 34.018 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Acife_1307 e50a5742261b34617672225e60cbc4fc 148 Pfam PF07977 FabA-like domain 13 137 7.1E-37 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Acife_1307 e50a5742261b34617672225e60cbc4fc 148 Gene3D G3DSA:3.10.129.10 1 145 7.3E-58 T 12-10-2018 Acife_1307 e50a5742261b34617672225e60cbc4fc 148 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 4 141 6.7E-56 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Acife_3041 10cb18f0d9ddedce6f5b3ffebadd71bd 174 Pfam PF10502 Signal peptidase, peptidase S26 85 173 3.7E-13 T 12-10-2018 IPR019533 Peptidase S26 Acife_3041 10cb18f0d9ddedce6f5b3ffebadd71bd 174 SUPERFAMILY SSF51306 57 173 1.62E-21 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Acife_3041 10cb18f0d9ddedce6f5b3ffebadd71bd 174 Gene3D G3DSA:2.10.109.10 64 174 3.5E-13 T 12-10-2018 Acife_3041 10cb18f0d9ddedce6f5b3ffebadd71bd 174 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 63 172 4.1E-14 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Acife_0967 7e68c1d93ff5624de7acd918428a042c 128 SMART SM00450 20 125 5.0E-20 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_0967 7e68c1d93ff5624de7acd918428a042c 128 Gene3D G3DSA:3.40.250.10 1 128 1.2E-30 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_0967 7e68c1d93ff5624de7acd918428a042c 128 Pfam PF00581 Rhodanese-like domain 30 121 7.4E-16 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_0967 7e68c1d93ff5624de7acd918428a042c 128 SUPERFAMILY SSF52821 10 128 1.31E-30 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_2539 c608804734baabe0ef684ec25286b146 644 SUPERFAMILY SSF81271 4 61 2.68E-13 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Acife_2539 c608804734baabe0ef684ec25286b146 644 Gene3D G3DSA:3.40.50.800 533 642 6.2E-30 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily Acife_2539 c608804734baabe0ef684ec25286b146 644 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 635 34.643 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Acife_2539 c608804734baabe0ef684ec25286b146 644 Gene3D G3DSA:3.30.54.20 130 186 1.6E-65 T 12-10-2018 Acife_2539 c608804734baabe0ef684ec25286b146 644 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 218 5.0E-16 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Acife_2539 c608804734baabe0ef684ec25286b146 644 Gene3D G3DSA:3.30.980.10 69 221 1.6E-65 T 12-10-2018 Acife_2539 c608804734baabe0ef684ec25286b146 644 Pfam PF02824 TGS domain 4 61 7.1E-7 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Acife_2539 c608804734baabe0ef684ec25286b146 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 6.5E-55 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Acife_2539 c608804734baabe0ef684ec25286b146 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 6.5E-55 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Acife_2539 c608804734baabe0ef684ec25286b146 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 6.5E-55 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Acife_2539 c608804734baabe0ef684ec25286b146 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 6.5E-55 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Acife_2539 c608804734baabe0ef684ec25286b146 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 6.5E-55 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Acife_2539 c608804734baabe0ef684ec25286b146 644 SUPERFAMILY SSF55681 242 527 1.13E-95 T 12-10-2018 Acife_2539 c608804734baabe0ef684ec25286b146 644 Gene3D G3DSA:3.30.930.10 222 532 1.3E-123 T 12-10-2018 Acife_2539 c608804734baabe0ef684ec25286b146 644 SUPERFAMILY SSF55186 64 240 4.32E-65 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Acife_2539 c608804734baabe0ef684ec25286b146 644 SUPERFAMILY SSF52954 531 632 7.25E-29 T 12-10-2018 Acife_2539 c608804734baabe0ef684ec25286b146 644 Pfam PF03129 Anticodon binding domain 542 627 2.6E-19 T 12-10-2018 IPR004154 Anticodon-binding Acife_2539 c608804734baabe0ef684ec25286b146 644 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 625 1.3E-221 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Acife_2539 c608804734baabe0ef684ec25286b146 644 SMART SM00863 169 218 1.8E-25 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Acife_2539 c608804734baabe0ef684ec25286b146 644 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 322 530 9.7E-41 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_2539 c608804734baabe0ef684ec25286b146 644 Gene3D G3DSA:3.10.20.30 3 62 3.1E-19 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_1153 346a3ca2d5a73384e963cefd085c3ceb 76 Gene3D G3DSA:2.10.260.10 1 76 1.6E-25 T 12-10-2018 Acife_1153 346a3ca2d5a73384e963cefd085c3ceb 76 SUPERFAMILY SSF89447 4 66 1.1E-9 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_1153 346a3ca2d5a73384e963cefd085c3ceb 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 42 1.8E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 SUPERFAMILY SSF54980 609 696 4.27E-28 T 12-10-2018 IPR035647 EF-G domain III/V-like Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 Pfam PF14492 Elongation Factor G, domain II 410 483 9.5E-35 T 12-10-2018 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.4E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.4E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.4E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.4E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 6.4E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 SUPERFAMILY SSF54211 485 605 1.06E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 Gene3D G3DSA:3.30.70.240 610 680 3.0E-89 T 12-10-2018 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 Pfam PF03764 Elongation factor G, domain IV 485 604 2.4E-46 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.6E-66 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 Gene3D G3DSA:2.40.30.10 300 411 7.0E-44 T 12-10-2018 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 SUPERFAMILY SSF52540 6 288 1.29E-104 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 SMART SM00838 606 693 1.7E-51 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 SUPERFAMILY SSF50447 254 408 6.36E-36 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 Pfam PF03144 Elongation factor Tu domain 2 330 397 5.0E-15 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 SMART SM00889 486 604 4.4E-73 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 Pfam PF00679 Elongation factor G C-terminus 606 692 3.5E-29 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 Gene3D G3DSA:3.30.70.870 412 489 7.3E-34 T 12-10-2018 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 Gene3D G3DSA:3.40.50.300 1 299 3.7E-117 T 12-10-2018 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 698 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 Gene3D G3DSA:3.30.230.10 490 693 3.0E-89 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 111.513 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 5.3E-35 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_2713 8d9f66f29e06e06370a143359cacbef4 699 SUPERFAMILY SSF54980 408 486 6.47E-26 T 12-10-2018 IPR035647 EF-G domain III/V-like Acife_2411 46a26ac83e980358cf92471ceacdf8db 217 Pfam PF03006 Haemolysin-III related 14 208 9.1E-34 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Acife_2411 46a26ac83e980358cf92471ceacdf8db 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 16 215 6.1E-53 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 Acife_1322 579d777fad2b67426726e1aa2a5e0993 695 Pfam PF03170 Bacterial cellulose synthase subunit 34 567 1.9E-45 T 12-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 Acife_1322 579d777fad2b67426726e1aa2a5e0993 695 Gene3D G3DSA:2.60.120.260 32 162 5.7E-9 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Acife_1322 579d777fad2b67426726e1aa2a5e0993 695 Gene3D G3DSA:2.60.120.260 333 455 2.8E-13 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Acife_0052 685b7a253eb41a5d247eca7e330a64d2 518 Pfam PF02321 Outer membrane efflux protein 87 281 1.4E-12 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_0052 685b7a253eb41a5d247eca7e330a64d2 518 Pfam PF02321 Outer membrane efflux protein 308 489 3.8E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_0052 685b7a253eb41a5d247eca7e330a64d2 518 Gene3D G3DSA:1.20.1600.10 77 492 3.6E-99 T 12-10-2018 Acife_0052 685b7a253eb41a5d247eca7e330a64d2 518 Gene3D G3DSA:2.20.200.10 124 380 3.6E-99 T 12-10-2018 Acife_0052 685b7a253eb41a5d247eca7e330a64d2 518 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 30 491 1.9E-102 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Acife_0052 685b7a253eb41a5d247eca7e330a64d2 518 SUPERFAMILY SSF56954 23 495 4.58E-82 T 12-10-2018 Acife_1064 39a47dcef259fba6107f24c33294a452 133 Gene3D G3DSA:3.30.420.270 60 127 1.8E-9 T 12-10-2018 Acife_1064 39a47dcef259fba6107f24c33294a452 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 130 6.9E-28 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Acife_3197 f065a7d6916c383f2c255fbf69ea16ca 123 Pfam PF03899 ATP synthase I chain 15 104 7.1E-6 T 12-10-2018 IPR005598 ATP synthase protein I Acife_1178 128c02dbe4c92e24dec7d86eb6923454 332 Gene3D G3DSA:3.90.25.10 178 311 2.2E-128 T 12-10-2018 Acife_1178 128c02dbe4c92e24dec7d86eb6923454 332 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 311 7.9E-59 T 12-10-2018 IPR016040 NAD(P)-binding domain Acife_1178 128c02dbe4c92e24dec7d86eb6923454 332 Gene3D G3DSA:3.40.50.720 9 257 2.2E-128 T 12-10-2018 Acife_1178 128c02dbe4c92e24dec7d86eb6923454 332 SUPERFAMILY SSF51735 6 330 3.25E-95 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1178 128c02dbe4c92e24dec7d86eb6923454 332 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 8 328 4.7E-136 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Acife_2018 384df61a7d58200589d82464043a583e 306 Pfam PF01791 DeoC/LacD family aldolase 35 272 6.6E-43 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Acife_2018 384df61a7d58200589d82464043a583e 306 Gene3D G3DSA:3.20.20.70 3 306 3.1E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2018 384df61a7d58200589d82464043a583e 306 SUPERFAMILY SSF51569 22 290 1.16E-56 T 12-10-2018 Acife_2018 384df61a7d58200589d82464043a583e 306 PIRSF PIRSF038992 13 305 2.6E-59 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Acife_2018 384df61a7d58200589d82464043a583e 306 SMART SM01133 33 273 1.7E-21 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Acife_1104 08644ac4b05fb70c1f60329a5ecdfe86 112 SUPERFAMILY SSF54292 7 105 8.96E-30 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Acife_1104 08644ac4b05fb70c1f60329a5ecdfe86 112 PRINTS PR00355 Adrenodoxin signature 60 74 1.1E-9 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Acife_1104 08644ac4b05fb70c1f60329a5ecdfe86 112 PRINTS PR00355 Adrenodoxin signature 83 91 1.1E-9 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Acife_1104 08644ac4b05fb70c1f60329a5ecdfe86 112 PRINTS PR00355 Adrenodoxin signature 42 52 1.1E-9 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Acife_1104 08644ac4b05fb70c1f60329a5ecdfe86 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 92 3.6E-14 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Acife_1104 08644ac4b05fb70c1f60329a5ecdfe86 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 12-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Acife_1104 08644ac4b05fb70c1f60329a5ecdfe86 112 Gene3D G3DSA:3.10.20.30 1 112 1.5E-33 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_1104 08644ac4b05fb70c1f60329a5ecdfe86 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 3 110 2.7E-51 T 12-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 Acife_1233 71cd6009083c578cb333290ef08097b1 237 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Acife_1233 71cd6009083c578cb333290ef08097b1 237 SUPERFAMILY SSF55120 64 232 2.64E-36 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_1233 71cd6009083c578cb333290ef08097b1 237 Pfam PF01479 S4 domain 6 47 2.3E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_1233 71cd6009083c578cb333290ef08097b1 237 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 228 5.7E-37 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Acife_1233 71cd6009083c578cb333290ef08097b1 237 SUPERFAMILY SSF55174 7 93 1.16E-11 T 12-10-2018 Acife_1233 71cd6009083c578cb333290ef08097b1 237 Gene3D G3DSA:3.30.70.580 66 230 1.3E-46 T 12-10-2018 Acife_1233 71cd6009083c578cb333290ef08097b1 237 Gene3D G3DSA:3.10.290.10 5 65 1.1E-12 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Acife_1233 71cd6009083c578cb333290ef08097b1 237 Gene3D G3DSA:3.30.70.1560 132 214 1.3E-46 T 12-10-2018 Acife_1233 71cd6009083c578cb333290ef08097b1 237 Pfam PF00849 RNA pseudouridylate synthase 65 195 1.1E-13 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_1233 71cd6009083c578cb333290ef08097b1 237 SMART SM00363 6 62 3.5E-4 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2124 2f1d476cd37722a93e4570e989c21e17 801 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 87 545 2.8E-123 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_2124 2f1d476cd37722a93e4570e989c21e17 801 SMART SM00434 66 540 1.1E-196 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Acife_2124 2f1d476cd37722a93e4570e989c21e17 801 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 68 798 2.4E-214 T 12-10-2018 Acife_2124 2f1d476cd37722a93e4570e989c21e17 801 Gene3D G3DSA:2.120.10.90 581 783 2.5E-12 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Acife_2124 2f1d476cd37722a93e4570e989c21e17 801 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 59 800 32.064 T 12-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Acife_2124 2f1d476cd37722a93e4570e989c21e17 801 Gene3D G3DSA:3.90.199.10 87 561 1.9E-174 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Acife_2124 2f1d476cd37722a93e4570e989c21e17 801 Gene3D G3DSA:3.30.1360.40 292 410 1.9E-174 T 12-10-2018 Acife_2124 2f1d476cd37722a93e4570e989c21e17 801 Gene3D G3DSA:1.10.268.10 448 533 1.9E-174 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Acife_2124 2f1d476cd37722a93e4570e989c21e17 801 SUPERFAMILY SSF101904 583 799 5.75E-37 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Acife_2124 2f1d476cd37722a93e4570e989c21e17 801 SUPERFAMILY SSF56719 86 561 7.06E-138 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Acife_2200 da8128b6d253fb88c9724bf25fd36a2d 271 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 13 246 8.7E-61 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2200 da8128b6d253fb88c9724bf25fd36a2d 271 Gene3D G3DSA:3.30.70.660 114 249 4.0E-47 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Acife_2200 da8128b6d253fb88c9724bf25fd36a2d 271 Pfam PF01416 tRNA pseudouridine synthase 151 253 6.1E-27 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2200 da8128b6d253fb88c9724bf25fd36a2d 271 Pfam PF01416 tRNA pseudouridine synthase 17 111 8.0E-10 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2200 da8128b6d253fb88c9724bf25fd36a2d 271 SUPERFAMILY SSF55120 10 258 1.58E-85 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2200 da8128b6d253fb88c9724bf25fd36a2d 271 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 252 33.655 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2200 da8128b6d253fb88c9724bf25fd36a2d 271 PIRSF PIRSF001430 9 264 2.7E-73 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2200 da8128b6d253fb88c9724bf25fd36a2d 271 Gene3D G3DSA:3.30.70.580 8 113 2.5E-35 T 12-10-2018 Acife_1286 638d589fea0e72e1171abae6faee2ad6 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 229 1.2E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_1286 638d589fea0e72e1171abae6faee2ad6 236 SMART SM00862 155 230 2.1E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_1286 638d589fea0e72e1171abae6faee2ad6 236 SUPERFAMILY SSF46894 132 229 2.63E-30 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Acife_1286 638d589fea0e72e1171abae6faee2ad6 236 SUPERFAMILY SSF52172 7 130 1.85E-39 T 12-10-2018 IPR011006 CheY-like superfamily Acife_1286 638d589fea0e72e1171abae6faee2ad6 236 Pfam PF00072 Response regulator receiver domain 10 122 3.0E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1286 638d589fea0e72e1171abae6faee2ad6 236 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 7 230 1.5E-91 T 12-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 Acife_1286 638d589fea0e72e1171abae6faee2ad6 236 Gene3D G3DSA:3.40.50.2300 2 130 5.7E-35 T 12-10-2018 Acife_1286 638d589fea0e72e1171abae6faee2ad6 236 SMART SM00448 8 121 3.1E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1286 638d589fea0e72e1171abae6faee2ad6 236 Gene3D G3DSA:1.10.10.10 132 232 5.8E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2901 0d5abf7c78d94f8e597f30e7857a7816 148 SUPERFAMILY SSF55804 6 145 1.07E-29 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Acife_2901 0d5abf7c78d94f8e597f30e7857a7816 148 Gene3D G3DSA:3.40.930.10 2 146 3.8E-38 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Acife_2901 0d5abf7c78d94f8e597f30e7857a7816 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 50 66 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain Acife_2901 0d5abf7c78d94f8e597f30e7857a7816 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 144 9.7E-30 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Acife_2816 f920c848713173353d5260e218216890 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 3.9E-134 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_2816 f920c848713173353d5260e218216890 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.114 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_2816 f920c848713173353d5260e218216890 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 6.6E-5 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_2816 f920c848713173353d5260e218216890 360 Pfam PF00953 Glycosyl transferase family 4 99 284 5.8E-38 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Acife_2816 f920c848713173353d5260e218216890 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_2816 f920c848713173353d5260e218216890 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 Gene3D G3DSA:3.40.50.720 1 202 2.7E-75 T 12-10-2018 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 4.6E-136 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 PIRSF PIRSF500134 1 440 5.3E-183 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 296 1.2E-36 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 SMART SM00984 320 424 2.2E-52 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 SUPERFAMILY SSF52413 305 434 7.59E-41 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 5.5E-60 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 SUPERFAMILY SSF51735 1 195 9.38E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1754 38d98826e14968da7524312e6a55d5b0 440 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 423 1.8E-32 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 Gene3D G3DSA:1.20.5.100 204 234 1.6E-15 T 12-10-2018 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 SUPERFAMILY SSF48179 204 301 5.37E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 Gene3D G3DSA:3.40.50.720 235 440 5.4E-83 T 12-10-2018 Acife_1754 38d98826e14968da7524312e6a55d5b0 440 PIRSF PIRSF000124 1 439 2.1E-149 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 1.0E-21 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 344 2.7E-25 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 245 2.1E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 181 201 2.1E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 Gene3D G3DSA:3.40.50.300 175 348 8.9E-50 T 12-10-2018 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 Gene3D G3DSA:3.40.50.300 2 162 9.4E-43 T 12-10-2018 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 434 9.7E-169 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 SUPERFAMILY SSF52540 5 166 2.46E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 Pfam PF01926 50S ribosome-binding GTPase 180 298 1.7E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 Pfam PF01926 50S ribosome-binding GTPase 5 120 4.9E-26 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 PIRSF PIRSF006485 1 442 1.9E-166 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 434 3.8E-25 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 Hamap MF_00195 GTPase Der [der]. 2 437 37.713 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 SUPERFAMILY SSF52540 138 440 2.5E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1519 6b723e60e5fc64aa5e242e41e41f4715 449 Gene3D G3DSA:3.30.300.20 354 436 6.3E-22 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Acife_2694 e580d2d51c67077764eba5e3a6f0ffac 117 SUPERFAMILY SSF53137 3 115 4.8E-50 T 12-10-2018 Acife_2694 e580d2d51c67077764eba5e3a6f0ffac 117 Gene3D G3DSA:3.30.420.100 1 117 6.7E-44 T 12-10-2018 Acife_2694 e580d2d51c67077764eba5e3a6f0ffac 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 2 117 3.3E-39 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2694 e580d2d51c67077764eba5e3a6f0ffac 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 117 1.4E-36 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2694 e580d2d51c67077764eba5e3a6f0ffac 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 27.336 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1535 32837b15d4a09a093e1ee95840c2a344 137 Gene3D G3DSA:3.40.50.1010 1 128 1.8E-33 T 12-10-2018 Acife_1535 32837b15d4a09a093e1ee95840c2a344 137 Pfam PF01850 PIN domain 2 122 2.9E-14 T 12-10-2018 IPR002716 PIN domain Acife_1535 32837b15d4a09a093e1ee95840c2a344 137 SUPERFAMILY SSF88723 2 121 2.3E-21 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_1535 32837b15d4a09a093e1ee95840c2a344 137 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 128 11.531 T 12-10-2018 IPR022907 VapC family GO:0004540 Acife_0069 dadc26aa4ca776c085d6fd7478c4e477 77 Pfam PF13187 4Fe-4S dicluster domain 24 67 2.1E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_0069 dadc26aa4ca776c085d6fd7478c4e477 77 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_0069 dadc26aa4ca776c085d6fd7478c4e477 77 SUPERFAMILY SSF54862 9 70 3.97E-14 T 12-10-2018 Acife_0069 dadc26aa4ca776c085d6fd7478c4e477 77 Gene3D G3DSA:3.30.70.20 11 72 7.7E-14 T 12-10-2018 Acife_0153 8aec83a91c782b97da7a04edfc3bfcdf 116 Pfam PF00825 Ribonuclease P 11 115 6.6E-27 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Acife_0153 8aec83a91c782b97da7a04edfc3bfcdf 116 Gene3D G3DSA:3.30.230.10 10 116 1.5E-29 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Acife_0153 8aec83a91c782b97da7a04edfc3bfcdf 116 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 116 2.0E-13 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Acife_0153 8aec83a91c782b97da7a04edfc3bfcdf 116 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 11 115 16.454 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Acife_0153 8aec83a91c782b97da7a04edfc3bfcdf 116 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 60 74 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 Acife_0153 8aec83a91c782b97da7a04edfc3bfcdf 116 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 14 115 9.1E-29 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Acife_0153 8aec83a91c782b97da7a04edfc3bfcdf 116 SUPERFAMILY SSF54211 10 115 1.87E-26 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2201 63501f71e9ac841b3c2036f416e5c70e 757 SUPERFAMILY SSF48452 480 538 7.37E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_2201 63501f71e9ac841b3c2036f416e5c70e 757 Gene3D G3DSA:1.25.40.10 474 537 1.0E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_2201 63501f71e9ac841b3c2036f416e5c70e 757 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 181 251 6.5E-17 T 12-10-2018 IPR020012 Motility protein FimV, N-terminal Acife_2201 63501f71e9ac841b3c2036f416e5c70e 757 Gene3D G3DSA:1.20.58.2200 698 757 1.7E-18 T 12-10-2018 IPR038440 FimV, C-terminal domain superfamily Acife_2201 63501f71e9ac841b3c2036f416e5c70e 757 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 714 757 2.0E-18 T 12-10-2018 IPR020011 Motility protein FimV, C-terminal Acife_1862 4b13167c0533a5f13acffa19ea5bc304 314 Pfam PF01040 UbiA prenyltransferase family 40 291 1.0E-52 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Acife_1862 4b13167c0533a5f13acffa19ea5bc304 314 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 78 100 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site Acife_1862 4b13167c0533a5f13acffa19ea5bc304 314 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 23 307 17.705 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Acife_1862 4b13167c0533a5f13acffa19ea5bc304 314 Gene3D G3DSA:1.10.357.140 33 199 7.5E-17 T 12-10-2018 Acife_1862 4b13167c0533a5f13acffa19ea5bc304 314 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 26 304 4.1E-83 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Acife_1020 4b13167c0533a5f13acffa19ea5bc304 314 Pfam PF01040 UbiA prenyltransferase family 40 291 1.0E-52 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Acife_1020 4b13167c0533a5f13acffa19ea5bc304 314 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 78 100 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site Acife_1020 4b13167c0533a5f13acffa19ea5bc304 314 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 23 307 17.705 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Acife_1020 4b13167c0533a5f13acffa19ea5bc304 314 Gene3D G3DSA:1.10.357.140 33 199 7.5E-17 T 12-10-2018 Acife_1020 4b13167c0533a5f13acffa19ea5bc304 314 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 26 304 4.1E-83 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Acife_2670 1d96a6ab7c6513af008a12ec3830d540 247 PRINTS PR00160 Glutaredoxin signature 217 230 2.1E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup Acife_2670 1d96a6ab7c6513af008a12ec3830d540 247 PRINTS PR00160 Glutaredoxin signature 174 192 2.1E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup Acife_2670 1d96a6ab7c6513af008a12ec3830d540 247 PRINTS PR00160 Glutaredoxin signature 231 244 2.1E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup Acife_2670 1d96a6ab7c6513af008a12ec3830d540 247 Pfam PF00462 Glutaredoxin 174 234 3.8E-17 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Acife_2670 1d96a6ab7c6513af008a12ec3830d540 247 ProSitePatterns PS00195 Glutaredoxin active site. 176 192 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Acife_2670 1d96a6ab7c6513af008a12ec3830d540 247 Gene3D G3DSA:3.40.30.10 173 245 1.7E-20 T 12-10-2018 Acife_2670 1d96a6ab7c6513af008a12ec3830d540 247 Gene3D G3DSA:3.40.30.10 6 166 1.6E-62 T 12-10-2018 Acife_2670 1d96a6ab7c6513af008a12ec3830d540 247 SUPERFAMILY SSF52833 6 243 4.55E-43 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2670 1d96a6ab7c6513af008a12ec3830d540 247 Pfam PF08534 Redoxin 7 161 4.6E-33 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Acife_2670 1d96a6ab7c6513af008a12ec3830d540 247 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 165 244 1.1E-32 T 12-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 PIRSF PIRSF000149 1 338 7.9E-132 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 3.7E-126 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 Gene3D G3DSA:3.30.360.10 155 318 2.5E-143 T 12-10-2018 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 Gene3D G3DSA:3.40.50.720 4 328 2.5E-143 T 12-10-2018 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 105 2.2E-36 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 3.5E-37 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 3.5E-37 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 273 288 3.5E-37 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 3.5E-37 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 3.5E-37 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 SUPERFAMILY SSF51735 1 174 1.4E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 SUPERFAMILY SSF55347 156 317 3.74E-67 T 12-10-2018 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 SMART SM00846 3 156 5.4E-93 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0805 bb769f5030f738a230eb1a0ae41e822d 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 316 5.7E-60 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_1678 a6c8e3c78c2e022cbc8f3d107e1b11bf 793 Pfam PF00862 Sucrose synthase 2 540 4.9E-200 T 12-10-2018 IPR000368 Sucrose synthase GO:0005985|GO:0016157 Acife_1678 a6c8e3c78c2e022cbc8f3d107e1b11bf 793 Gene3D G3DSA:3.40.50.2000 266 782 1.5E-233 T 12-10-2018 Acife_1678 a6c8e3c78c2e022cbc8f3d107e1b11bf 793 Pfam PF00534 Glycosyl transferases group 1 547 715 4.2E-27 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_1678 a6c8e3c78c2e022cbc8f3d107e1b11bf 793 SUPERFAMILY SSF53756 264 751 4.32E-48 T 12-10-2018 Acife_1678 a6c8e3c78c2e022cbc8f3d107e1b11bf 793 TIGRFAM TIGR02470 sucr_synth: sucrose synthase 19 789 0.0 T 12-10-2018 IPR012820 Sucrose synthase, plant/cyanobacteria GO:0005985|GO:0016157 KEGG: 00500+2.4.1.13|MetaCyc: PWY-3801 Acife_1678 a6c8e3c78c2e022cbc8f3d107e1b11bf 793 Gene3D G3DSA:3.40.50.2000 514 741 1.5E-233 T 12-10-2018 Acife_1678 a6c8e3c78c2e022cbc8f3d107e1b11bf 793 Gene3D G3DSA:3.10.450.330 1 133 3.8E-36 T 12-10-2018 Acife_1678 a6c8e3c78c2e022cbc8f3d107e1b11bf 793 Gene3D G3DSA:1.20.120.1230 135 261 1.4E-39 T 12-10-2018 Acife_3018 bbb8769e4a7ff8eb53bc0d5fd34d4c0f 317 SUPERFAMILY SSF51735 10 265 2.43E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_3018 bbb8769e4a7ff8eb53bc0d5fd34d4c0f 317 Gene3D G3DSA:3.40.50.720 4 264 4.8E-40 T 12-10-2018 Acife_3018 bbb8769e4a7ff8eb53bc0d5fd34d4c0f 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 12 216 2.4E-16 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Acife_1602 bbb80fa267b8d332a4ae94d069d3e872 141 SUPERFAMILY SSF55620 5 112 1.04E-24 T 12-10-2018 Acife_1602 bbb80fa267b8d332a4ae94d069d3e872 141 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 141 48.846 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Acife_1602 bbb80fa267b8d332a4ae94d069d3e872 141 Gene3D G3DSA:3.30.1130.10 3 130 5.3E-39 T 12-10-2018 Acife_1602 bbb80fa267b8d332a4ae94d069d3e872 141 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 7 117 6.9E-50 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Acife_1602 bbb80fa267b8d332a4ae94d069d3e872 141 PIRSF PIRSF027377 1 124 1.4E-50 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Acife_1602 bbb80fa267b8d332a4ae94d069d3e872 141 Pfam PF14489 QueF-like protein 40 118 8.3E-29 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Acife_1671 3e30db63c403f7d00bab858153d12e85 284 Gene3D G3DSA:3.20.20.70 121 272 1.8E-68 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1671 3e30db63c403f7d00bab858153d12e85 284 TIGRFAM TIGR01334 modD: modD protein 1 281 3.1E-71 T 12-10-2018 IPR006242 Putative pyrophosphorylase ModD GO:0016763 Acife_1671 3e30db63c403f7d00bab858153d12e85 284 SUPERFAMILY SSF54675 4 104 7.06E-19 T 12-10-2018 Acife_1671 3e30db63c403f7d00bab858153d12e85 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 103 1.7E-16 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Acife_1671 3e30db63c403f7d00bab858153d12e85 284 PIRSF PIRSF006250 1 283 1.6E-56 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Acife_1671 3e30db63c403f7d00bab858153d12e85 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 105 277 3.2E-33 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Acife_1671 3e30db63c403f7d00bab858153d12e85 284 SUPERFAMILY SSF51690 105 281 1.88E-38 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Acife_1671 3e30db63c403f7d00bab858153d12e85 284 Gene3D G3DSA:3.90.1170.20 8 276 1.8E-68 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Acife_1367 d230f33bd10de03218af23387df3de81 97 Pfam PF12840 Helix-turn-helix domain 16 72 1.1E-10 T 12-10-2018 Acife_1367 d230f33bd10de03218af23387df3de81 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 1.0E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1367 d230f33bd10de03218af23387df3de81 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 1.0E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1367 d230f33bd10de03218af23387df3de81 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.0E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1367 d230f33bd10de03218af23387df3de81 97 Gene3D G3DSA:1.10.10.10 1 96 3.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1367 d230f33bd10de03218af23387df3de81 97 SMART SM00418 16 94 2.9E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1367 d230f33bd10de03218af23387df3de81 97 SUPERFAMILY SSF46785 5 91 2.07E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2917 3916da6af9a7f604f9d3e6e82da01420 110 SUPERFAMILY SSF52833 3 105 7.04E-33 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2917 3916da6af9a7f604f9d3e6e82da01420 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 102 7.4E-45 T 12-10-2018 IPR004480 Monothiol glutaredoxin-related Acife_2917 3916da6af9a7f604f9d3e6e82da01420 110 Pfam PF00462 Glutaredoxin 17 82 4.1E-19 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Acife_2917 3916da6af9a7f604f9d3e6e82da01420 110 PIRSF PIRSF005894 1 109 4.8E-47 T 12-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 Acife_2917 3916da6af9a7f604f9d3e6e82da01420 110 Gene3D G3DSA:3.40.30.10 7 103 3.2E-33 T 12-10-2018 Acife_0969 139a6389b1f2950ae5884190066550fc 201 Gene3D G3DSA:2.40.160.20 22 184 4.3E-15 T 12-10-2018 Acife_0969 139a6389b1f2950ae5884190066550fc 201 SUPERFAMILY SSF56925 30 188 7.32E-11 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Acife_0969 139a6389b1f2950ae5884190066550fc 201 Pfam PF13505 Outer membrane protein beta-barrel domain 14 177 2.6E-7 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel Acife_1524 8be603b7aec584416c211a9b591f5de6 318 Gene3D G3DSA:1.10.3720.10 64 316 3.9E-32 T 12-10-2018 IPR035906 MetI-like superfamily Acife_1524 8be603b7aec584416c211a9b591f5de6 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 311 1.9E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Acife_1524 8be603b7aec584416c211a9b591f5de6 318 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 5 314 1.2E-75 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Acife_1524 8be603b7aec584416c211a9b591f5de6 318 SUPERFAMILY SSF161098 24 308 3.27E-32 T 12-10-2018 IPR035906 MetI-like superfamily Acife_0839 f9303c209e74e4580e0173d4f061e1af 562 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 314 395 5.0E-19 T 12-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Acife_0839 f9303c209e74e4580e0173d4f061e1af 562 Gene3D G3DSA:3.30.950.30 2 139 4.0E-18 T 12-10-2018 IPR038461 Schlafen, AAA domain superfamily Acife_0839 f9303c209e74e4580e0173d4f061e1af 562 Gene3D G3DSA:3.30.565.60 233 399 2.7E-41 T 12-10-2018 IPR038475 RecG, C-terminal domain superfamily Acife_0839 f9303c209e74e4580e0173d4f061e1af 562 Pfam PF04326 Putative DNA-binding domain 32 139 3.7E-8 T 12-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Acife_2332 cee2552bd0ceab1f9d3e559bc4abad27 325 Gene3D G3DSA:1.10.443.10 104 320 5.4E-30 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_2332 cee2552bd0ceab1f9d3e559bc4abad27 325 SUPERFAMILY SSF56349 51 303 7.65E-28 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_2332 cee2552bd0ceab1f9d3e559bc4abad27 325 Pfam PF00589 Phage integrase family 115 298 2.6E-15 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SUPERFAMILY SSF55874 369 534 1.2E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 Pfam PF13426 PAS domain 49 163 1.1E-8 T 12-10-2018 IPR000014 PAS domain Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 Pfam PF13426 PAS domain 189 292 6.0E-15 T 12-10-2018 IPR000014 PAS domain Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SUPERFAMILY SSF55785 49 173 1.4E-12 T 12-10-2018 IPR035965 PAS domain superfamily Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SMART SM00387 426 538 1.0E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SMART SM00388 313 380 2.9E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 Pfam PF00072 Response regulator receiver domain 567 678 7.0E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SMART SM00448 564 678 6.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SUPERFAMILY SSF47384 299 380 4.12E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 534 1.9E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 Gene3D G3DSA:3.30.450.20 26 180 8.1E-25 T 12-10-2018 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SUPERFAMILY SSF55785 161 287 2.97E-25 T 12-10-2018 IPR035965 PAS domain superfamily Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 Gene3D G3DSA:1.10.287.130 300 380 2.1E-21 T 12-10-2018 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 Pfam PF00512 His Kinase A (phospho-acceptor) domain 313 380 2.5E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 Gene3D G3DSA:3.30.450.20 186 299 9.8E-23 T 12-10-2018 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SUPERFAMILY SSF52172 565 693 1.02E-30 T 12-10-2018 IPR011006 CheY-like superfamily Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SMART SM00091 177 246 2.6E-5 T 12-10-2018 IPR000014 PAS domain Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SMART SM00091 35 100 0.047 T 12-10-2018 IPR000014 PAS domain Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SMART SM00086 123 165 9.1E-5 T 12-10-2018 IPR001610 PAC motif Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 SMART SM00086 251 293 35.0 T 12-10-2018 IPR001610 PAC motif Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 176 300 3.3E-18 T 12-10-2018 IPR000014 PAS domain Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 Gene3D G3DSA:3.40.50.12740 564 698 6.3E-34 T 12-10-2018 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 478 3.8E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 3.8E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 3.8E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_1338 b0a47cfa4026a976faae5f92e59f85a3 698 Gene3D G3DSA:3.30.565.10 381 540 2.7E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_0881 c41f989a5f231d5c77d16467b623b805 932 Gene3D G3DSA:3.40.50.150 279 628 5.3E-25 T 12-10-2018 Acife_0881 c41f989a5f231d5c77d16467b623b805 932 SUPERFAMILY SSF53335 166 626 2.99E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_3261 2229c600b0e748605721d8de122ae742 430 Gene3D G3DSA:3.90.1150.10 9 418 1.6E-176 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_3261 2229c600b0e748605721d8de122ae742 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 271 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Acife_3261 2229c600b0e748605721d8de122ae742 430 SUPERFAMILY SSF53383 3 424 5.54E-133 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_3261 2229c600b0e748605721d8de122ae742 430 Gene3D G3DSA:3.40.640.10 70 318 1.6E-176 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_3261 2229c600b0e748605721d8de122ae742 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 4 426 104.571 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Acife_3261 2229c600b0e748605721d8de122ae742 430 Pfam PF00202 Aminotransferase class-III 34 395 8.7E-77 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Acife_3261 2229c600b0e748605721d8de122ae742 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 425 2.8E-184 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Acife_0186 2125193b334c5734ad57420836af6b19 401 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 1.9E-84 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 PRINTS PR00477 Phosphoglycerate kinase family signature 347 358 1.9E-84 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 PRINTS PR00477 Phosphoglycerate kinase family signature 370 387 1.9E-84 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 1.9E-84 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 1.9E-84 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.9E-84 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 1.9E-84 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 1.9E-84 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 1.9E-84 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 394 40.205 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 Gene3D G3DSA:3.40.50.1260 8 392 1.2E-150 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 SUPERFAMILY SSF53748 2 394 5.65E-149 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 PIRSF PIRSF000724 1 401 4.9E-142 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 Gene3D G3DSA:3.40.50.1260 171 384 1.2E-150 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0186 2125193b334c5734ad57420836af6b19 401 Pfam PF00162 Phosphoglycerate kinase 6 384 1.2E-146 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_1904 b7ca3feeafdfe76b807cb37e2a0cc762 850 SMART SM00382 476 745 3.7E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1904 b7ca3feeafdfe76b807cb37e2a0cc762 850 Gene3D G3DSA:3.40.50.300 595 799 3.5E-24 T 12-10-2018 Acife_1904 b7ca3feeafdfe76b807cb37e2a0cc762 850 Gene3D G3DSA:3.40.50.300 451 568 3.8E-5 T 12-10-2018 Acife_1904 b7ca3feeafdfe76b807cb37e2a0cc762 850 SUPERFAMILY SSF52540 454 785 4.3E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1904 b7ca3feeafdfe76b807cb37e2a0cc762 850 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 188 402 2.2E-19 T 12-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 Acife_1294 461d85740d92707160ba5002393a7889 378 Gene3D G3DSA:3.40.50.2000 7 191 1.5E-25 T 12-10-2018 Acife_1294 461d85740d92707160ba5002393a7889 378 Pfam PF00534 Glycosyl transferases group 1 191 353 1.2E-26 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_1294 461d85740d92707160ba5002393a7889 378 SUPERFAMILY SSF53756 9 374 6.77E-72 T 12-10-2018 Acife_1294 461d85740d92707160ba5002393a7889 378 Pfam PF13439 Glycosyltransferase Family 4 19 180 1.6E-23 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Acife_1294 461d85740d92707160ba5002393a7889 378 Gene3D G3DSA:3.40.50.2000 192 355 8.5E-36 T 12-10-2018 Acife_2294 64f158c59dc7764393876fd29cd77689 279 SUPERFAMILY SSF53927 26 268 2.05E-63 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Acife_2294 64f158c59dc7764393876fd29cd77689 279 Pfam PF02634 FdhD/NarQ family 33 268 7.5E-65 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Acife_2294 64f158c59dc7764393876fd29cd77689 279 PIRSF PIRSF015626 11 271 3.0E-66 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Acife_2294 64f158c59dc7764393876fd29cd77689 279 Gene3D G3DSA:3.40.140.10 130 272 1.2E-43 T 12-10-2018 Acife_2294 64f158c59dc7764393876fd29cd77689 279 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 28 269 1.4E-54 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Acife_2294 64f158c59dc7764393876fd29cd77689 279 Gene3D G3DSA:3.10.20.10 34 119 4.4E-9 T 12-10-2018 Acife_2294 64f158c59dc7764393876fd29cd77689 279 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 13 269 30.165 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Acife_0009 64278003b370968b7fa725d18fb78f7e 243 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 20 241 1.2E-54 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Acife_0009 64278003b370968b7fa725d18fb78f7e 243 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 140 238 1.7E-30 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Acife_0009 64278003b370968b7fa725d18fb78f7e 243 Gene3D G3DSA:3.30.750.120 10 129 2.1E-16 T 12-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily Acife_0009 64278003b370968b7fa725d18fb78f7e 243 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 15 112 7.1E-11 T 12-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 Acife_0009 64278003b370968b7fa725d18fb78f7e 243 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 14 242 24.327 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Acife_0009 64278003b370968b7fa725d18fb78f7e 243 Gene3D G3DSA:2.160.20.70 136 243 1.5E-29 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Acife_0009 64278003b370968b7fa725d18fb78f7e 243 SUPERFAMILY SSF63848 138 241 6.15E-29 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PIRSF PIRSF001336 1 630 6.4E-237 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 330 349 2.3E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 120 132 2.3E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 236 249 2.3E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 97 115 2.3E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 537 550 2.3E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 TIGRFAM TIGR01273 speA: arginine decarboxylase 3 628 2.7E-238 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 SUPERFAMILY SSF51419 65 342 6.54E-65 T 12-10-2018 IPR029066 PLP-binding barrel Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 Gene3D G3DSA:1.20.58.930 362 455 1.5E-219 T 12-10-2018 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 Gene3D G3DSA:2.40.37.10 12 562 1.5E-219 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 1 629 40.288 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 274 287 - T 12-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 97 115 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 SUPERFAMILY SSF50621 421 560 1.05E-5 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01180 Arginine decarboxylase signature 320 337 5.3E-68 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01180 Arginine decarboxylase signature 193 215 5.3E-68 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01180 Arginine decarboxylase signature 484 509 5.3E-68 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01180 Arginine decarboxylase signature 169 190 5.3E-68 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01180 Arginine decarboxylase signature 65 80 5.3E-68 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01180 Arginine decarboxylase signature 143 158 5.3E-68 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01180 Arginine decarboxylase signature 89 103 5.3E-68 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01180 Arginine decarboxylase signature 537 558 5.3E-68 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 PRINTS PR01180 Arginine decarboxylase signature 459 480 5.3E-68 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 77 340 4.0E-47 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Acife_1612 b731a6c7b80ab0d9608728ef15d7d1a1 637 Gene3D G3DSA:3.20.20.10 66 345 1.5E-219 T 12-10-2018 IPR029066 PLP-binding barrel Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 PIRSF PIRSF000363 3 279 1.5E-120 T 12-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 Hamap MF_00533 Nitrogenase iron protein [nifH]. 4 277 52.378 T 12-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 SUPERFAMILY SSF52540 5 279 9.37E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 Gene3D G3DSA:3.40.50.300 3 278 3.8E-67 T 12-10-2018 Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 PRINTS PR00091 Nitrogenase component II signature 125 140 9.4E-38 T 12-10-2018 Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 PRINTS PR00091 Nitrogenase component II signature 10 23 9.4E-38 T 12-10-2018 Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 PRINTS PR00091 Nitrogenase component II signature 87 101 9.4E-38 T 12-10-2018 Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 PRINTS PR00091 Nitrogenase component II signature 32 47 9.4E-38 T 12-10-2018 Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 ProSitePatterns PS00746 NifH/frxC family signature 1. 89 101 - T 12-10-2018 IPR030655 NifH/chlL conserved site Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 5 276 7.2E-134 T 12-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 5 279 2.4E-139 T 12-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Acife_1650 3e8ed11090b2d15cbac3455e0934be49 295 ProSitePatterns PS00692 NifH/frxC family signature 2. 126 139 - T 12-10-2018 IPR030655 NifH/chlL conserved site Acife_2888 3386f265d77556f8f16aa938a13dbf6a 278 Gene3D G3DSA:3.40.50.150 60 277 1.4E-61 T 12-10-2018 Acife_2888 3386f265d77556f8f16aa938a13dbf6a 278 Pfam PF17284 Spermidine synthase tetramerisation domain 5 57 7.5E-18 T 12-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Acife_2888 3386f265d77556f8f16aa938a13dbf6a 278 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 5 267 35.24 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Acife_2888 3386f265d77556f8f16aa938a13dbf6a 278 TIGRFAM TIGR00417 speE: spermidine synthase 6 275 4.8E-81 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Acife_2888 3386f265d77556f8f16aa938a13dbf6a 278 Pfam PF01564 Spermine/spermidine synthase domain 62 239 4.7E-49 T 12-10-2018 Acife_2888 3386f265d77556f8f16aa938a13dbf6a 278 SUPERFAMILY SSF53335 4 276 1.6E-74 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2888 3386f265d77556f8f16aa938a13dbf6a 278 Gene3D G3DSA:2.30.140.10 3 55 3.9E-21 T 12-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Acife_2888 3386f265d77556f8f16aa938a13dbf6a 278 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 82 95 - T 12-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Acife_1742 1be1a60b32760e0ff287f74d664ed90f 1185 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 845 1185 6.4E-62 T 12-10-2018 IPR007452 Translocation and assembly module TamB Acife_2192 c69e26164275413fc92556c53c46c5d9 404 SUPERFAMILY SSF53383 37 399 8.51E-124 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_2192 c69e26164275413fc92556c53c46c5d9 404 PIRSF PIRSF001434 4 402 8.4E-131 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Acife_2192 c69e26164275413fc92556c53c46c5d9 404 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 17 397 1.0E-174 T 12-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Acife_2192 c69e26164275413fc92556c53c46c5d9 404 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 17 398 1.1E-136 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Acife_2192 c69e26164275413fc92556c53c46c5d9 404 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 208 222 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Acife_2192 c69e26164275413fc92556c53c46c5d9 404 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 18 399 54.788 T 12-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Acife_2192 c69e26164275413fc92556c53c46c5d9 404 Gene3D G3DSA:3.90.1150.10 268 403 5.0E-52 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_2192 c69e26164275413fc92556c53c46c5d9 404 Gene3D G3DSA:3.40.640.10 12 264 3.1E-88 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1732 632cdfb1807b83cc69107b8f4525ba05 203 SUPERFAMILY SSF48317 16 195 3.66E-29 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Acife_1732 632cdfb1807b83cc69107b8f4525ba05 203 SMART SM00014 76 190 3.0E-13 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Acife_1732 632cdfb1807b83cc69107b8f4525ba05 203 Pfam PF01569 PAP2 superfamily 90 194 2.9E-20 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Acife_1732 632cdfb1807b83cc69107b8f4525ba05 203 Gene3D G3DSA:1.20.144.10 110 202 4.4E-19 T 12-10-2018 Acife_1645 7ae47e3bba9c8b2748fa6836f7a0bdc0 463 Gene3D G3DSA:3.40.50.1980 29 179 5.7E-49 T 12-10-2018 Acife_1645 7ae47e3bba9c8b2748fa6836f7a0bdc0 463 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 43 441 7.7E-111 T 12-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Acife_1645 7ae47e3bba9c8b2748fa6836f7a0bdc0 463 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 3 456 2.8E-202 T 12-10-2018 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0009399|GO:0065003 Acife_1645 7ae47e3bba9c8b2748fa6836f7a0bdc0 463 SUPERFAMILY SSF53807 19 454 6.87E-143 T 12-10-2018 Acife_1645 7ae47e3bba9c8b2748fa6836f7a0bdc0 463 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 127 141 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Acife_1645 7ae47e3bba9c8b2748fa6836f7a0bdc0 463 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 61 68 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Acife_1645 7ae47e3bba9c8b2748fa6836f7a0bdc0 463 Gene3D G3DSA:3.40.50.12380 180 450 3.5E-111 T 12-10-2018 Acife_3205 ce5bf7128d2173640322f4188e0fb13b 309 SUPERFAMILY SSF144083 245 307 2.48E-11 T 12-10-2018 Acife_3205 ce5bf7128d2173640322f4188e0fb13b 309 Pfam PF01544 CorA-like Mg2+ transporter protein 23 305 5.8E-38 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Acife_3205 ce5bf7128d2173640322f4188e0fb13b 309 SUPERFAMILY SSF143865 9 242 8.76E-21 T 12-10-2018 Acife_3205 ce5bf7128d2173640322f4188e0fb13b 309 Gene3D G3DSA:1.20.58.340 253 309 2.1E-10 T 12-10-2018 Acife_3205 ce5bf7128d2173640322f4188e0fb13b 309 Gene3D G3DSA:1.20.58.340 127 251 4.8E-8 T 12-10-2018 Acife_2541 852e814566a8291a2cff3258096693ce 481 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 72 97 1.2E-6 T 12-10-2018 Acife_2541 852e814566a8291a2cff3258096693ce 481 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 412 431 1.2E-6 T 12-10-2018 Acife_2541 852e814566a8291a2cff3258096693ce 481 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 215 236 1.2E-6 T 12-10-2018 Acife_2541 852e814566a8291a2cff3258096693ce 481 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 469 9.7E-144 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Acife_2541 852e814566a8291a2cff3258096693ce 481 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 470 18.468 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Acife_2541 852e814566a8291a2cff3258096693ce 481 Pfam PF00361 Proton-conducting membrane transporter 126 418 3.0E-76 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2783 850eed846005fe220de735cf0be52819 292 Pfam PF08241 Methyltransferase domain 55 151 2.2E-23 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Acife_2783 850eed846005fe220de735cf0be52819 292 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 10 268 33.537 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Acife_2783 850eed846005fe220de735cf0be52819 292 Gene3D G3DSA:3.40.50.150 5 229 1.3E-36 T 12-10-2018 Acife_2783 850eed846005fe220de735cf0be52819 292 SUPERFAMILY SSF53335 15 256 8.13E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2783 850eed846005fe220de735cf0be52819 292 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 18 267 2.5E-72 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Acife_0041 ed497a0b58a743cb0f826f20f7890738 131 SUPERFAMILY SSF88723 1 124 1.01E-16 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_0041 ed497a0b58a743cb0f826f20f7890738 131 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 128 9.694 T 12-10-2018 IPR022907 VapC family GO:0004540 Acife_0041 ed497a0b58a743cb0f826f20f7890738 131 Pfam PF01850 PIN domain 2 119 1.1E-7 T 12-10-2018 IPR002716 PIN domain Acife_0041 ed497a0b58a743cb0f826f20f7890738 131 Gene3D G3DSA:3.40.50.1010 1 127 5.0E-24 T 12-10-2018 Acife_2925 5de92adf283c67830ee2db4e3a903888 253 SUPERFAMILY SSF51366 1 250 1.18E-83 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Acife_2925 5de92adf283c67830ee2db4e3a903888 253 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 250 48.322 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Acife_2925 5de92adf283c67830ee2db4e3a903888 253 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 250 1.6E-110 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Acife_2925 5de92adf283c67830ee2db4e3a903888 253 Gene3D G3DSA:3.20.20.70 1 253 2.5E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2925 5de92adf283c67830ee2db4e3a903888 253 Pfam PF00977 Histidine biosynthesis protein 5 233 1.1E-87 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Acife_0291 28a9d7fb796a05d89a473fa6e8c6a298 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 9 169 1.0E-42 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Acife_0291 28a9d7fb796a05d89a473fa6e8c6a298 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 9 170 22.431 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Acife_0291 28a9d7fb796a05d89a473fa6e8c6a298 170 SUPERFAMILY SSF50346 100 169 7.26E-16 T 12-10-2018 IPR011033 PRC-barrel-like superfamily Acife_0291 28a9d7fb796a05d89a473fa6e8c6a298 170 Pfam PF05239 PRC-barrel domain 98 165 1.5E-7 T 12-10-2018 IPR027275 PRC-barrel domain Acife_0291 28a9d7fb796a05d89a473fa6e8c6a298 170 SUPERFAMILY SSF50447 8 94 1.66E-20 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_0291 28a9d7fb796a05d89a473fa6e8c6a298 170 Pfam PF01782 RimM N-terminal domain 12 90 4.7E-21 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 Acife_0291 28a9d7fb796a05d89a473fa6e8c6a298 170 Gene3D G3DSA:2.30.30.240 100 170 3.8E-21 T 12-10-2018 Acife_0291 28a9d7fb796a05d89a473fa6e8c6a298 170 Gene3D G3DSA:2.40.30.60 8 94 6.8E-27 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 SUPERFAMILY SSF53448 147 447 3.89E-47 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 13 727 6.7E-230 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 PRINTS PR01439 Cellulose synthase subunit A signature 482 501 2.6E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 PRINTS PR01439 Cellulose synthase subunit A signature 71 91 2.6E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 PRINTS PR01439 Cellulose synthase subunit A signature 99 124 2.6E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 PRINTS PR01439 Cellulose synthase subunit A signature 154 173 2.6E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 PRINTS PR01439 Cellulose synthase subunit A signature 413 439 2.6E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 PRINTS PR01439 Cellulose synthase subunit A signature 554 575 2.6E-21 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 Gene3D G3DSA:2.40.10.220 577 694 1.6E-5 T 12-10-2018 Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 Gene3D G3DSA:3.90.550.10 134 373 4.8E-82 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 Pfam PF00535 Glycosyl transferase family 2 148 335 1.5E-32 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 SUPERFAMILY SSF141371 578 696 7.46E-7 T 12-10-2018 Acife_1323 bfcfcd38732d529160e3f90b98ba4d21 761 Pfam PF07238 PilZ domain 581 686 5.9E-10 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Acife_3218 fba970f2929dce9640e01442537d96a2 681 SUPERFAMILY SSF53448 6 271 1.42E-45 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3218 fba970f2929dce9640e01442537d96a2 681 Pfam PF13439 Glycosyltransferase Family 4 319 478 7.3E-8 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Acife_3218 fba970f2929dce9640e01442537d96a2 681 Pfam PF13641 Glycosyltransferase like family 2 6 224 5.9E-18 T 12-10-2018 Acife_3218 fba970f2929dce9640e01442537d96a2 681 Gene3D G3DSA:3.40.50.2000 318 674 1.3E-48 T 12-10-2018 Acife_3218 fba970f2929dce9640e01442537d96a2 681 SUPERFAMILY SSF53756 317 680 1.97E-65 T 12-10-2018 Acife_3218 fba970f2929dce9640e01442537d96a2 681 Gene3D G3DSA:3.40.50.2000 477 659 1.3E-48 T 12-10-2018 Acife_3218 fba970f2929dce9640e01442537d96a2 681 Pfam PF00534 Glycosyl transferases group 1 499 658 1.1E-24 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_3218 fba970f2929dce9640e01442537d96a2 681 Gene3D G3DSA:3.90.550.10 2 227 5.0E-39 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1313 d55cdee6d5f59b20bbe5a3a97020eb95 1166 SUPERFAMILY SSF89550 6 262 3.43E-25 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Acife_1313 d55cdee6d5f59b20bbe5a3a97020eb95 1166 Pfam PF14579 Helix-hairpin-helix motif 800 888 1.8E-23 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_1313 d55cdee6d5f59b20bbe5a3a97020eb95 1166 Gene3D G3DSA:3.20.20.140 1 268 1.9E-92 T 12-10-2018 Acife_1313 d55cdee6d5f59b20bbe5a3a97020eb95 1166 SMART SM00481 7 74 2.7E-28 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Acife_1313 d55cdee6d5f59b20bbe5a3a97020eb95 1166 Gene3D G3DSA:1.10.10.1600 429 506 9.0E-30 T 12-10-2018 Acife_1313 d55cdee6d5f59b20bbe5a3a97020eb95 1166 Pfam PF02811 PHP domain 8 171 1.1E-47 T 12-10-2018 IPR004013 PHP domain GO:0003824 Acife_1313 d55cdee6d5f59b20bbe5a3a97020eb95 1166 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 290 727 8.7E-174 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_1313 d55cdee6d5f59b20bbe5a3a97020eb95 1166 Gene3D G3DSA:2.40.50.140 967 1058 1.6E-6 T 12-10-2018 Acife_1313 d55cdee6d5f59b20bbe5a3a97020eb95 1166 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1016 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_1832 562cd529976fa339fe1be9eed592cdae 348 Gene3D G3DSA:3.30.250.10 269 327 2.4E-25 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Acife_1832 562cd529976fa339fe1be9eed592cdae 348 Gene3D G3DSA:3.40.50.300 27 268 1.1E-83 T 12-10-2018 Acife_1832 562cd529976fa339fe1be9eed592cdae 348 SMART SM00382 58 229 5.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1832 562cd529976fa339fe1be9eed592cdae 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 324 3.5E-172 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Acife_1832 562cd529976fa339fe1be9eed592cdae 348 SUPERFAMILY SSF54752 269 325 1.24E-20 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Acife_1832 562cd529976fa339fe1be9eed592cdae 348 Hamap MF_00268 Protein RecA [recA]. 5 330 51.401 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Acife_1832 562cd529976fa339fe1be9eed592cdae 348 SUPERFAMILY SSF52540 5 268 1.73E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1832 562cd529976fa339fe1be9eed592cdae 348 ProSitePatterns PS00321 recA signature. 214 222 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Acife_1832 562cd529976fa339fe1be9eed592cdae 348 Pfam PF00154 recA bacterial DNA recombination protein 7 269 5.1E-147 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Acife_1832 562cd529976fa339fe1be9eed592cdae 348 PRINTS PR00142 RecA protein signature 244 273 1.2E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Acife_1832 562cd529976fa339fe1be9eed592cdae 348 PRINTS PR00142 RecA protein signature 128 157 1.2E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Acife_1832 562cd529976fa339fe1be9eed592cdae 348 PRINTS PR00142 RecA protein signature 211 239 1.2E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Acife_1832 562cd529976fa339fe1be9eed592cdae 348 PRINTS PR00142 RecA protein signature 94 123 1.2E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Acife_1832 562cd529976fa339fe1be9eed592cdae 348 PRINTS PR00142 RecA protein signature 298 315 1.2E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Acife_1832 562cd529976fa339fe1be9eed592cdae 348 PRINTS PR00142 RecA protein signature 166 195 1.2E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Acife_1344 0b0e4c22fac3c4bbacee84d11f123fd1 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 1.6E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1344 0b0e4c22fac3c4bbacee84d11f123fd1 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 1.6E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1344 0b0e4c22fac3c4bbacee84d11f123fd1 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 1.6E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1344 0b0e4c22fac3c4bbacee84d11f123fd1 118 SMART SM00418 13 91 3.4E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1344 0b0e4c22fac3c4bbacee84d11f123fd1 118 SUPERFAMILY SSF46785 11 99 2.73E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1344 0b0e4c22fac3c4bbacee84d11f123fd1 118 Gene3D G3DSA:1.10.10.10 2 109 3.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1344 0b0e4c22fac3c4bbacee84d11f123fd1 118 Pfam PF12840 Helix-turn-helix domain 12 65 2.8E-13 T 12-10-2018 Acife_1176 b8c02ed9cdab4990ec50b8ae534751bd 360 SUPERFAMILY SSF51735 7 349 1.5E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1176 b8c02ed9cdab4990ec50b8ae534751bd 360 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 10 353 5.6E-150 T 12-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 Acife_1176 b8c02ed9cdab4990ec50b8ae534751bd 360 Pfam PF16363 GDP-mannose 4,6 dehydratase 18 324 3.1E-32 T 12-10-2018 IPR016040 NAD(P)-binding domain Acife_1176 b8c02ed9cdab4990ec50b8ae534751bd 360 Gene3D G3DSA:3.90.25.10 193 355 6.6E-63 T 12-10-2018 Acife_1176 b8c02ed9cdab4990ec50b8ae534751bd 360 Gene3D G3DSA:3.40.50.720 7 192 6.8E-50 T 12-10-2018 Acife_1490 cddc1a6ee43d1df76ddef26770b27eca 219 PIRSF PIRSF010372 1 210 1.5E-66 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type Acife_1490 cddc1a6ee43d1df76ddef26770b27eca 219 Pfam PF04299 Putative FMN-binding domain 1 168 4.9E-60 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type Acife_1490 cddc1a6ee43d1df76ddef26770b27eca 219 Gene3D G3DSA:2.30.110.10 1 209 1.0E-68 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Acife_1490 cddc1a6ee43d1df76ddef26770b27eca 219 SUPERFAMILY SSF50475 9 193 7.85E-34 T 12-10-2018 Acife_1154 27cd4688cc7d09030c3daf0028029a4d 413 Pfam PF13635 Domain of unknown function (DUF4143) 203 361 1.5E-30 T 12-10-2018 IPR025420 Domain of unknown function DUF4143 Acife_1154 27cd4688cc7d09030c3daf0028029a4d 413 SUPERFAMILY SSF52540 15 209 2.97E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1154 27cd4688cc7d09030c3daf0028029a4d 413 Gene3D G3DSA:3.40.50.300 14 112 2.2E-5 T 12-10-2018 Acife_1154 27cd4688cc7d09030c3daf0028029a4d 413 Pfam PF13173 AAA domain 23 140 7.0E-25 T 12-10-2018 Acife_2970 21bbb7bfcfe3e46e81a0b7e9bd013dc3 92 Pfam PF08681 Protein of unknown function (DUF1778) 11 87 1.4E-23 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Acife_2970 21bbb7bfcfe3e46e81a0b7e9bd013dc3 92 Gene3D G3DSA:1.20.5.780 6 88 6.5E-16 T 12-10-2018 Acife_2970 21bbb7bfcfe3e46e81a0b7e9bd013dc3 92 SUPERFAMILY SSF47598 8 85 6.0E-19 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_1534 bee21354203285135bd9b8c1a396c95c 311 SUPERFAMILY SSF46458 12 118 3.45E-7 T 12-10-2018 IPR009050 Globin-like superfamily Acife_1534 bee21354203285135bd9b8c1a396c95c 311 Gene3D G3DSA:1.10.490.10 8 141 5.5E-15 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Acife_1534 bee21354203285135bd9b8c1a396c95c 311 Gene3D G3DSA:3.30.450.40 142 307 5.1E-8 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_1534 bee21354203285135bd9b8c1a396c95c 311 Pfam PF11563 Protoglobin 12 122 6.8E-8 T 12-10-2018 Acife_1534 bee21354203285135bd9b8c1a396c95c 311 SUPERFAMILY SSF55781 144 286 7.85E-7 T 12-10-2018 Acife_0075 59764d6ab4d820fc35eceb92639c9618 376 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 112 357 1.1E-57 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Acife_0075 59764d6ab4d820fc35eceb92639c9618 376 SUPERFAMILY SSF53756 45 373 1.46E-89 T 12-10-2018 Acife_0075 59764d6ab4d820fc35eceb92639c9618 376 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 45 373 5.7E-117 T 12-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 Acife_0075 59764d6ab4d820fc35eceb92639c9618 376 Gene3D G3DSA:3.40.50.2000 44 189 9.1E-45 T 12-10-2018 Acife_0075 59764d6ab4d820fc35eceb92639c9618 376 Gene3D G3DSA:3.40.50.2000 203 374 4.8E-53 T 12-10-2018 Acife_3145 6afe9c1b0b1c45b4a4ec8d13f55f4932 473 Gene3D G3DSA:3.20.20.110 143 473 3.2E-153 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_3145 6afe9c1b0b1c45b4a4ec8d13f55f4932 473 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 147 455 2.7E-130 T 12-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_3145 6afe9c1b0b1c45b4a4ec8d13f55f4932 473 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 189 197 - T 12-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_3145 6afe9c1b0b1c45b4a4ec8d13f55f4932 473 SUPERFAMILY SSF54966 4 141 1.57E-56 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_3145 6afe9c1b0b1c45b4a4ec8d13f55f4932 473 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 17 137 1.1E-43 T 12-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_3145 6afe9c1b0b1c45b4a4ec8d13f55f4932 473 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 2 468 60.422 T 12-10-2018 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_3145 6afe9c1b0b1c45b4a4ec8d13f55f4932 473 SUPERFAMILY SSF51649 143 470 5.23E-143 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_3145 6afe9c1b0b1c45b4a4ec8d13f55f4932 473 Gene3D G3DSA:3.30.70.150 15 141 6.0E-49 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_1015 c6706a7d0146bd810f20c652bed3e875 321 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 158 232 3.5E-6 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1015 c6706a7d0146bd810f20c652bed3e875 321 Gene3D G3DSA:2.60.40.420 118 293 7.2E-41 T 12-10-2018 IPR008972 Cupredoxin Acife_1015 c6706a7d0146bd810f20c652bed3e875 321 SUPERFAMILY SSF49503 132 292 4.02E-37 T 12-10-2018 IPR008972 Cupredoxin Acife_1015 c6706a7d0146bd810f20c652bed3e875 321 Pfam PF06481 COX Aromatic Rich Motif 249 295 1.1E-11 T 12-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 Acife_1015 c6706a7d0146bd810f20c652bed3e875 321 SUPERFAMILY SSF81464 33 121 5.07E-14 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1015 c6706a7d0146bd810f20c652bed3e875 321 Gene3D G3DSA:1.10.287.90 33 117 4.9E-21 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 473 3.4E-154 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 PIRSF PIRSF000774 1 475 2.2E-150 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 454 461 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 Pfam PF04552 Sigma-54, DNA binding domain 316 474 6.4E-68 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 Gene3D G3DSA:1.10.10.1330 120 259 1.0E-25 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 49 3.7E-16 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 PRINTS PR00045 Sigma-54 factor signature 375 387 6.1E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 PRINTS PR00045 Sigma-54 factor signature 187 204 6.1E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 PRINTS PR00045 Sigma-54 factor signature 449 467 6.1E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 PRINTS PR00045 Sigma-54 factor signature 391 402 6.1E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 Pfam PF04963 Sigma-54 factor, core binding domain 114 304 1.4E-59 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 363 382 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Acife_2903 d94af6a2a616eb92f753dba00335f7bd 475 Gene3D G3DSA:1.10.10.60 416 473 1.3E-19 T 12-10-2018 Acife_3167 8089dcdbae6e87f785989116cf352f85 95 SUPERFAMILY SSF48295 4 64 1.05E-10 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Acife_3167 8089dcdbae6e87f785989116cf352f85 95 Pfam PF01527 Transposase 5 54 1.5E-6 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Acife_0763 8089dcdbae6e87f785989116cf352f85 95 SUPERFAMILY SSF48295 4 64 1.05E-10 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Acife_0763 8089dcdbae6e87f785989116cf352f85 95 Pfam PF01527 Transposase 5 54 1.5E-6 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Acife_0859 8089dcdbae6e87f785989116cf352f85 95 SUPERFAMILY SSF48295 4 64 1.05E-10 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Acife_0859 8089dcdbae6e87f785989116cf352f85 95 Pfam PF01527 Transposase 5 54 1.5E-6 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Acife_0395 8089dcdbae6e87f785989116cf352f85 95 SUPERFAMILY SSF48295 4 64 1.05E-10 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Acife_0395 8089dcdbae6e87f785989116cf352f85 95 Pfam PF01527 Transposase 5 54 1.5E-6 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Acife_3172 8089dcdbae6e87f785989116cf352f85 95 SUPERFAMILY SSF48295 4 64 1.05E-10 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Acife_3172 8089dcdbae6e87f785989116cf352f85 95 Pfam PF01527 Transposase 5 54 1.5E-6 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Acife_1449 3117eeb44635a25dcab39976faf7d722 333 Gene3D G3DSA:3.40.50.300 8 165 2.7E-37 T 12-10-2018 Acife_1449 3117eeb44635a25dcab39976faf7d722 333 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 225 319 1.6E-6 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Acife_1449 3117eeb44635a25dcab39976faf7d722 333 Pfam PF13177 DNA polymerase III, delta subunit 19 164 1.6E-34 T 12-10-2018 Acife_1449 3117eeb44635a25dcab39976faf7d722 333 SUPERFAMILY SSF52540 16 204 8.67E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3233 0d56bb31b675a387c05499b29b1e992f 234 Gene3D G3DSA:3.40.50.150 23 175 1.6E-13 T 12-10-2018 Acife_3233 0d56bb31b675a387c05499b29b1e992f 234 Pfam PF13578 Methyltransferase domain 46 163 1.1E-10 T 12-10-2018 Acife_1670 26d9a7b8424bfdbe033e66b3715d462b 149 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 50 68 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Acife_1670 26d9a7b8424bfdbe033e66b3715d462b 149 SUPERFAMILY SSF46785 4 134 2.18E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1670 26d9a7b8424bfdbe033e66b3715d462b 149 Gene3D G3DSA:1.10.10.10 1 140 2.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1670 26d9a7b8424bfdbe033e66b3715d462b 149 Pfam PF02082 Transcriptional regulator 1 83 1.9E-14 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Acife_1670 26d9a7b8424bfdbe033e66b3715d462b 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 1.3E-23 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SUPERFAMILY SSF50249 351 449 3.51E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 13 522 7.3E-200 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Gene3D G3DSA:2.40.50.140 455 533 1.3E-11 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Gene3D G3DSA:2.40.50.140 14 107 1.1E-17 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Gene3D G3DSA:2.40.50.140 196 277 1.1E-26 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Gene3D G3DSA:2.40.50.140 278 365 1.1E-27 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Gene3D G3DSA:2.40.50.140 366 454 4.3E-25 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 PIRSF PIRSF002111 1 541 6.8E-205 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SUPERFAMILY SSF50249 264 364 1.94E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Gene3D G3DSA:2.40.50.140 108 188 5.9E-6 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SMART SM00316 199 269 5.0E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SMART SM00316 284 356 2.1E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SMART SM00316 458 523 1.8E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SMART SM00316 28 96 1.8E-7 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SMART SM00316 112 180 3.2E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SMART SM00316 371 443 9.8E-24 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SUPERFAMILY SSF50249 13 120 1.34E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 PRINTS PR00681 Ribosomal protein S1 signature 339 357 1.7E-87 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 PRINTS PR00681 Ribosomal protein S1 signature 164 184 1.7E-87 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 PRINTS PR00681 Ribosomal protein S1 signature 135 152 1.7E-87 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 PRINTS PR00681 Ribosomal protein S1 signature 48 62 1.7E-87 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 PRINTS PR00681 Ribosomal protein S1 signature 93 112 1.7E-87 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 PRINTS PR00681 Ribosomal protein S1 signature 117 133 1.7E-87 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 PRINTS PR00681 Ribosomal protein S1 signature 221 242 1.7E-87 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 PRINTS PR00681 Ribosomal protein S1 signature 30 48 1.7E-87 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 PRINTS PR00681 Ribosomal protein S1 signature 299 318 1.7E-87 T 12-10-2018 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SUPERFAMILY SSF50249 199 284 4.75E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Pfam PF00575 S1 RNA binding domain 199 269 1.1E-20 T 12-10-2018 IPR003029 S1 domain GO:0003676 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Pfam PF00575 S1 RNA binding domain 370 443 1.7E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Pfam PF00575 S1 RNA binding domain 458 523 5.0E-11 T 12-10-2018 IPR003029 S1 domain GO:0003676 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Pfam PF00575 S1 RNA binding domain 28 95 2.5E-7 T 12-10-2018 IPR003029 S1 domain GO:0003676 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Pfam PF00575 S1 RNA binding domain 287 356 1.7E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 Pfam PF00575 S1 RNA binding domain 112 180 1.5E-9 T 12-10-2018 IPR003029 S1 domain GO:0003676 Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SUPERFAMILY SSF50249 114 190 2.11E-11 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1395 e53f383509fa43adf0cf0dc74f8f14f6 568 SUPERFAMILY SSF50249 443 529 1.14E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 Gene3D G3DSA:3.40.50.620 199 394 3.5E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 SUPERFAMILY SSF54810 394 514 1.83E-51 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 SUPERFAMILY SSF52317 2 227 1.17E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 Pfam PF00117 Glutamine amidotransferase class-I 7 188 2.2E-34 T 12-10-2018 IPR017926 Glutamine amidotransferase Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 Pfam PF00958 GMP synthase C terminal domain 422 513 9.0E-46 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 SUPERFAMILY SSF52402 187 407 2.87E-56 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 514 53.994 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 514 1.3E-148 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 1.3E-6 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 PRINTS PR00096 Glutamine amidotransferase superfamily signature 167 180 1.3E-6 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 1.3E-6 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 76 92 6.9E-6 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 5 19 6.9E-6 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 46 60 6.9E-6 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 Gene3D G3DSA:3.40.50.880 1 195 7.3E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 PRINTS PR00097 Anthranilate synthase component II signature 5 19 3.8E-6 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 PRINTS PR00097 Anthranilate synthase component II signature 49 58 3.8E-6 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 PRINTS PR00097 Anthranilate synthase component II signature 76 87 3.8E-6 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 PRINTS PR00097 Anthranilate synthase component II signature 167 180 3.8E-6 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 Pfam PF03054 tRNA methyl transferase 219 252 1.1E-4 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 Gene3D G3DSA:3.30.300.10 395 514 1.7E-52 T 12-10-2018 Acife_2039 df7ba5dc98ca8e534fb3d8578bda907b 514 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 194 1.6E-67 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Acife_2552 d82e0bbdd99ff68d06b3c11d8bc3d143 202 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 120 141 - T 12-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2552 d82e0bbdd99ff68d06b3c11d8bc3d143 202 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 31 157 1.1E-42 T 12-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2552 d82e0bbdd99ff68d06b3c11d8bc3d143 202 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 16 167 34.94 T 12-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2552 d82e0bbdd99ff68d06b3c11d8bc3d143 202 SUPERFAMILY SSF143243 11 180 1.28E-55 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2552 d82e0bbdd99ff68d06b3c11d8bc3d143 202 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 147 4.0E-21 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2552 d82e0bbdd99ff68d06b3c11d8bc3d143 202 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 159 4.0E-44 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2552 d82e0bbdd99ff68d06b3c11d8bc3d143 202 Gene3D G3DSA:3.30.460.80 1 139 1.4E-45 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1792 968259995047b8faee814fdc4bcce88c 333 Pfam PF01343 Peptidase family S49 153 302 2.5E-42 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Acife_1792 968259995047b8faee814fdc4bcce88c 333 Pfam PF08496 Peptidase family S49 N-terminal 4 149 4.8E-45 T 12-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 Acife_1792 968259995047b8faee814fdc4bcce88c 333 SUPERFAMILY SSF52096 94 291 1.37E-28 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Acife_1792 968259995047b8faee814fdc4bcce88c 333 Gene3D G3DSA:3.40.1750.20 194 258 3.1E-41 T 12-10-2018 Acife_1792 968259995047b8faee814fdc4bcce88c 333 Gene3D G3DSA:3.90.226.10 100 294 3.1E-41 T 12-10-2018 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 Pfam PF00690 Cation transporter/ATPase, N-terminus 11 61 3.0E-13 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 73 328 1.6E-44 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 540 663 1.4E-31 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 SMART SM00831 4 66 6.0E-11 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 Pfam PF00689 Cation transporting ATPase, C-terminus 659 820 4.6E-26 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 606 631 4.5E-14 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 574 590 4.5E-14 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 434 452 4.5E-14 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 546 562 4.5E-14 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 SUPERFAMILY SSF81653 104 206 3.92E-25 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 308 314 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 Pfam PF00702 haloacid dehalogenase-like hydrolase 303 587 6.6E-24 T 12-10-2018 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 Pfam PF00122 E1-E2 ATPase 102 286 1.4E-49 T 12-10-2018 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 SUPERFAMILY SSF56784 304 677 3.92E-56 T 12-10-2018 IPR036412 HAD-like superfamily Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 Gene3D G3DSA:2.70.150.10 12 187 3.4E-215 T 12-10-2018 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 SUPERFAMILY SSF81660 313 475 3.6E-28 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 Gene3D G3DSA:1.20.1110.10 41 728 3.4E-215 T 12-10-2018 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 3.7E-40 T 12-10-2018 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 574 593 3.7E-40 T 12-10-2018 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 493 503 3.7E-40 T 12-10-2018 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 610 3.7E-40 T 12-10-2018 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 471 482 3.7E-40 T 12-10-2018 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 306 320 3.7E-40 T 12-10-2018 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 Gene3D G3DSA:3.40.50.1000 303 619 3.4E-215 T 12-10-2018 IPR023214 HAD superfamily Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 Gene3D G3DSA:3.40.1110.10 316 478 3.4E-215 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_1690 80ff20edcf1c1b5bf9293f8f4981687c 827 SUPERFAMILY SSF81665 10 818 6.28E-96 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Acife_0737 d59d4abf604d8baf7e8b5a33d6a35de6 178 SUPERFAMILY SSF46458 2 147 1.01E-24 T 12-10-2018 IPR009050 Globin-like superfamily Acife_0737 d59d4abf604d8baf7e8b5a33d6a35de6 178 Gene3D G3DSA:1.10.490.10 9 162 1.1E-31 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Acife_0737 d59d4abf604d8baf7e8b5a33d6a35de6 178 Pfam PF11563 Protoglobin 17 158 5.0E-25 T 12-10-2018 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 754 775 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 Pfam PF03477 ATP cone domain 24 120 8.8E-18 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 SUPERFAMILY SSF51998 356 912 1.62E-177 T 12-10-2018 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 432 451 1.1E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 567 578 1.1E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 623 646 1.1E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 764 791 1.1E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 661 683 1.1E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 PRINTS PR01183 Ribonucleotide reductase large chain signature 689 712 1.1E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 283 912 2.6E-211 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 Gene3D G3DSA:3.20.70.20 211 919 8.4E-240 T 12-10-2018 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 280 351 1.6E-19 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 Pfam PF02867 Ribonucleotide reductase, barrel domain 357 909 1.4E-177 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2561 6757676b24e855e61e8823edcbaa4cb2 950 SUPERFAMILY SSF48168 144 355 6.15E-58 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2522 1229b5be98de918b0df11090b234634e 235 Pfam PF02677 Uncharacterized BCR, COG1636 18 192 1.8E-62 T 12-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 Acife_2522 1229b5be98de918b0df11090b234634e 235 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 18 194 32.679 T 12-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 Acife_2845 4eb191f82fb405ccf38f951536ef3663 269 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 42 197 7.3E-27 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Acife_2845 4eb191f82fb405ccf38f951536ef3663 269 Gene3D G3DSA:3.40.47.10 15 170 7.5E-7 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_2845 4eb191f82fb405ccf38f951536ef3663 269 SUPERFAMILY SSF53901 1 166 5.25E-13 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_1499 68b82c53281d28fde27cf16e4cb1e242 430 Pfam PF13657 HipA N-terminal domain 11 109 7.9E-25 T 12-10-2018 IPR017508 HipA, N-terminal subdomain 1 Acife_1499 68b82c53281d28fde27cf16e4cb1e242 430 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 11 109 1.6E-25 T 12-10-2018 IPR017508 HipA, N-terminal subdomain 1 Acife_1499 68b82c53281d28fde27cf16e4cb1e242 430 Pfam PF07804 HipA-like C-terminal domain 155 397 7.3E-50 T 12-10-2018 IPR012893 HipA-like, C-terminal Acife_0311 9712a8d97da490979a3f43236cda118a 672 SUPERFAMILY SSF88713 7 281 2.78E-56 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Acife_0311 9712a8d97da490979a3f43236cda118a 672 Pfam PF03065 Glycosyl hydrolase family 57 9 293 1.5E-37 T 12-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Acife_0311 9712a8d97da490979a3f43236cda118a 672 Pfam PF09094 Domain of unknown function (DUF1925) 313 391 1.7E-37 T 12-10-2018 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain Acife_0311 9712a8d97da490979a3f43236cda118a 672 Gene3D G3DSA:3.20.110.20 3 389 2.4E-143 T 12-10-2018 Acife_0311 9712a8d97da490979a3f43236cda118a 672 ProDom PD014405 HYDROLASE METABOLISM CARBOHYDRATE GLYCOSIDASE ALPHA-AMYLASE TRANSFERASE 4-ALPHA-GLUCANOTRANSFERASE GLYCOSYLTRANSFERASE FAMILY DIRECT 321 392 2.0E-24 T 12-10-2018 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain Acife_0311 9712a8d97da490979a3f43236cda118a 672 SUPERFAMILY SSF88688 313 391 4.9E-31 T 12-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily Acife_0311 9712a8d97da490979a3f43236cda118a 672 SUPERFAMILY SSF74650 398 664 1.57E-53 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Acife_0311 9712a8d97da490979a3f43236cda118a 672 Gene3D G3DSA:2.70.98.10 399 525 7.5E-21 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Acife_0311 9712a8d97da490979a3f43236cda118a 672 Pfam PF09095 Domain of unknown function (DUF1926) 405 515 2.2E-24 T 12-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 Acife_0311 9712a8d97da490979a3f43236cda118a 672 Pfam PF09095 Domain of unknown function (DUF1926) 530 659 1.4E-20 T 12-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 Acife_1501 667568b26e46c07fe8d40d2b97531e5f 562 SUPERFAMILY SSF52540 35 223 1.09E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1501 667568b26e46c07fe8d40d2b97531e5f 562 Gene3D G3DSA:1.20.272.10 243 360 4.0E-21 T 12-10-2018 Acife_1501 667568b26e46c07fe8d40d2b97531e5f 562 SUPERFAMILY SSF48019 247 362 9.35E-16 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Acife_1501 667568b26e46c07fe8d40d2b97531e5f 562 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 4 354 7.4E-122 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Acife_1501 667568b26e46c07fe8d40d2b97531e5f 562 Pfam PF13177 DNA polymerase III, delta subunit 21 179 8.1E-42 T 12-10-2018 Acife_1501 667568b26e46c07fe8d40d2b97531e5f 562 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 363 1.4E-18 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Acife_1501 667568b26e46c07fe8d40d2b97531e5f 562 Gene3D G3DSA:3.40.50.300 14 178 1.4E-99 T 12-10-2018 Acife_1501 667568b26e46c07fe8d40d2b97531e5f 562 SMART SM00382 38 179 9.9E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1501 667568b26e46c07fe8d40d2b97531e5f 562 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 125 143 1.8E-6 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_1501 667568b26e46c07fe8d40d2b97531e5f 562 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 42 60 1.8E-6 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Acife_1501 667568b26e46c07fe8d40d2b97531e5f 562 Gene3D G3DSA:1.10.8.60 9 239 1.4E-99 T 12-10-2018 Acife_2684 69de17c26f769bdc6156044849c4d376 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 2.4E-32 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Acife_2684 69de17c26f769bdc6156044849c4d376 208 Pfam PF01479 S4 domain 99 145 2.7E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2684 69de17c26f769bdc6156044849c4d376 208 Gene3D G3DSA:1.10.1050.10 6 208 9.2E-84 T 12-10-2018 Acife_2684 69de17c26f769bdc6156044849c4d376 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 5.6E-71 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Acife_2684 69de17c26f769bdc6156044849c4d376 208 Gene3D G3DSA:3.10.290.10 97 193 9.2E-84 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Acife_2684 69de17c26f769bdc6156044849c4d376 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.254 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Acife_2684 69de17c26f769bdc6156044849c4d376 208 SUPERFAMILY SSF55174 4 208 9.29E-67 T 12-10-2018 Acife_2684 69de17c26f769bdc6156044849c4d376 208 SMART SM00363 98 163 1.0E-16 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2684 69de17c26f769bdc6156044849c4d376 208 SMART SM01390 3 97 1.2E-49 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Acife_0372 9d7dd7909f3b862fb4775eb57866a93a 920 Gene3D G3DSA:3.40.50.300 142 397 4.5E-18 T 12-10-2018 Acife_0372 9d7dd7909f3b862fb4775eb57866a93a 920 SUPERFAMILY SSF52540 143 342 8.64E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1189 96c236227be21aac25c2baa8bc01b4c0 141 SUPERFAMILY SSF88723 2 138 1.74E-16 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_1189 96c236227be21aac25c2baa8bc01b4c0 141 Pfam PF01850 PIN domain 4 130 7.0E-9 T 12-10-2018 IPR002716 PIN domain Acife_1189 96c236227be21aac25c2baa8bc01b4c0 141 Gene3D G3DSA:3.40.50.1010 1 135 1.7E-25 T 12-10-2018 Acife_2385 a7b91e50a486054237d27fa094cc129a 148 SUPERFAMILY SSF89095 1 147 7.85E-38 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Acife_2385 a7b91e50a486054237d27fa094cc129a 148 Gene3D G3DSA:1.10.1510.10 1 90 6.4E-30 T 12-10-2018 Acife_2385 a7b91e50a486054237d27fa094cc129a 148 Gene3D G3DSA:1.10.10.410 91 147 7.6E-15 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Acife_2385 a7b91e50a486054237d27fa094cc129a 148 Pfam PF09424 Yqey-like protein 4 146 8.8E-50 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Acife_2388 9455f643556b68675901b49d59f81be2 207 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 194 4.1E-48 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Acife_2388 9455f643556b68675901b49d59f81be2 207 Gene3D G3DSA:3.90.950.10 1 198 3.4E-65 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Acife_2388 9455f643556b68675901b49d59f81be2 207 Pfam PF01725 Ham1 family 4 192 1.5E-46 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Acife_2388 9455f643556b68675901b49d59f81be2 207 SUPERFAMILY SSF52972 1 195 1.33E-60 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Acife_2388 9455f643556b68675901b49d59f81be2 207 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 42.438 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Acife_0088 5b82aeeb6f7b3481609998974dc2dbd9 496 Gene3D G3DSA:2.40.50.140 32 133 2.2E-29 T 12-10-2018 Acife_0088 5b82aeeb6f7b3481609998974dc2dbd9 496 SUPERFAMILY SSF50249 39 133 7.76E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_0088 5b82aeeb6f7b3481609998974dc2dbd9 496 Gene3D G3DSA:3.40.1260.20 409 496 3.1E-7 T 12-10-2018 Acife_0088 5b82aeeb6f7b3481609998974dc2dbd9 496 SMART SM00316 37 127 5.6E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_0088 5b82aeeb6f7b3481609998974dc2dbd9 496 Pfam PF10150 Ribonuclease E/G family 129 400 8.3E-100 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Acife_0088 5b82aeeb6f7b3481609998974dc2dbd9 496 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 433 2.2E-155 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Acife_0088 5b82aeeb6f7b3481609998974dc2dbd9 496 Pfam PF00575 S1 RNA binding domain 38 126 6.0E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 Acife_0669 3a17015a7c744638a8d8072426caace8 400 Gene3D G3DSA:1.10.287.1120 146 395 4.6E-73 T 12-10-2018 Acife_0669 3a17015a7c744638a8d8072426caace8 400 Gene3D G3DSA:3.90.220.20 210 352 4.6E-73 T 12-10-2018 Acife_0669 3a17015a7c744638a8d8072426caace8 400 Gene3D G3DSA:3.90.220.20 3 398 4.6E-73 T 12-10-2018 Acife_0669 3a17015a7c744638a8d8072426caace8 400 SUPERFAMILY SSF116734 200 398 3.43E-35 T 12-10-2018 Acife_0669 3a17015a7c744638a8d8072426caace8 400 Pfam PF01420 Type I restriction modification DNA specificity domain 3 178 1.7E-16 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Acife_0669 3a17015a7c744638a8d8072426caace8 400 Pfam PF01420 Type I restriction modification DNA specificity domain 206 355 1.1E-20 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Acife_0669 3a17015a7c744638a8d8072426caace8 400 SUPERFAMILY SSF116734 2 188 6.21E-37 T 12-10-2018 Acife_2788 50a2c6fbae98080283af70419e4afdc7 702 Pfam PF13489 Methyltransferase domain 496 662 1.4E-9 T 12-10-2018 Acife_2788 50a2c6fbae98080283af70419e4afdc7 702 SUPERFAMILY SSF56436 197 449 2.83E-52 T 12-10-2018 IPR016187 C-type lectin fold Acife_2788 50a2c6fbae98080283af70419e4afdc7 702 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 459 701 5.5E-98 T 12-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain Acife_2788 50a2c6fbae98080283af70419e4afdc7 702 Pfam PF03781 Sulfatase-modifying factor enzyme 1 198 447 1.4E-26 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Acife_2788 50a2c6fbae98080283af70419e4afdc7 702 Gene3D G3DSA:3.90.1580.10 187 455 8.4E-22 T 12-10-2018 Acife_2788 50a2c6fbae98080283af70419e4afdc7 702 SUPERFAMILY SSF53335 467 664 2.15E-24 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2788 50a2c6fbae98080283af70419e4afdc7 702 Pfam PF12867 DinB superfamily 27 162 1.3E-8 T 12-10-2018 IPR024775 DinB-like domain Acife_2788 50a2c6fbae98080283af70419e4afdc7 702 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 9 447 5.5E-210 T 12-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase Acife_2788 50a2c6fbae98080283af70419e4afdc7 702 Gene3D G3DSA:3.40.50.150 466 643 1.4E-24 T 12-10-2018 Acife_2738 fe5f161e0c02efff38965d47b2640279 383 PIRSF PIRSF000443 1 382 3.1E-139 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Acife_2738 fe5f161e0c02efff38965d47b2640279 383 SUPERFAMILY SSF53474 14 376 7.24E-103 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_2738 fe5f161e0c02efff38965d47b2640279 383 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 10 375 30.169 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Acife_2738 fe5f161e0c02efff38965d47b2640279 383 Pfam PF00561 alpha/beta hydrolase fold 51 360 9.3E-32 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Acife_2738 fe5f161e0c02efff38965d47b2640279 383 Gene3D G3DSA:1.10.1740.110 187 293 1.9E-142 T 12-10-2018 Acife_2738 fe5f161e0c02efff38965d47b2640279 383 Gene3D G3DSA:3.40.50.1820 26 363 1.9E-142 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_2738 fe5f161e0c02efff38965d47b2640279 383 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 22 373 5.1E-144 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Acife_0070 1555f60c5a938da02db7c11ce42b5688 576 SUPERFAMILY SSF46977 427 553 9.81E-36 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Acife_0070 1555f60c5a938da02db7c11ce42b5688 576 Pfam PF00890 FAD binding domain 11 381 4.8E-38 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Acife_0070 1555f60c5a938da02db7c11ce42b5688 576 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 4.6E-6 T 12-10-2018 Acife_0070 1555f60c5a938da02db7c11ce42b5688 576 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 379 4.6E-6 T 12-10-2018 Acife_0070 1555f60c5a938da02db7c11ce42b5688 576 Gene3D G3DSA:3.50.50.90 1 282 5.0E-71 T 12-10-2018 Acife_0070 1555f60c5a938da02db7c11ce42b5688 576 Gene3D G3DSA:3.50.50.90 333 556 1.3E-46 T 12-10-2018 Acife_0070 1555f60c5a938da02db7c11ce42b5688 576 Pfam PF02910 Fumarate reductase flavoprotein C-term 445 551 2.6E-11 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Acife_0070 1555f60c5a938da02db7c11ce42b5688 576 PIRSF PIRSF000171 1 559 5.8E-219 T 12-10-2018 Acife_0070 1555f60c5a938da02db7c11ce42b5688 576 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 379 4.0E-12 T 12-10-2018 Acife_0070 1555f60c5a938da02db7c11ce42b5688 576 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 4.0E-12 T 12-10-2018 Acife_0070 1555f60c5a938da02db7c11ce42b5688 576 SUPERFAMILY SSF51905 6 412 2.02E-63 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2765 d0d09de9e8e049abe53f02b56b7722a3 275 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 100 3.6E-11 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Acife_2765 d0d09de9e8e049abe53f02b56b7722a3 275 PIRSF PIRSF000193 3 270 6.1E-68 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Acife_2765 d0d09de9e8e049abe53f02b56b7722a3 275 Gene3D G3DSA:3.40.50.720 2 165 4.3E-41 T 12-10-2018 Acife_2765 d0d09de9e8e049abe53f02b56b7722a3 275 SUPERFAMILY SSF51735 5 161 2.42E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2765 d0d09de9e8e049abe53f02b56b7722a3 275 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 267 2.7E-35 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Acife_2765 d0d09de9e8e049abe53f02b56b7722a3 275 Gene3D G3DSA:1.10.3730.10 166 270 1.1E-36 T 12-10-2018 Acife_2765 d0d09de9e8e049abe53f02b56b7722a3 275 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 267 7.6E-74 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Acife_2765 d0d09de9e8e049abe53f02b56b7722a3 275 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 267 25.797 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Acife_2765 d0d09de9e8e049abe53f02b56b7722a3 275 SUPERFAMILY SSF48179 163 268 8.16E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Acife_0167 a327ca2e96943e8f7cc37dc6041be61f 258 Pfam PF01061 ABC-2 type transporter 14 221 1.4E-24 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Acife_0167 a327ca2e96943e8f7cc37dc6041be61f 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 106 131 2.7E-41 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Acife_0167 a327ca2e96943e8f7cc37dc6041be61f 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 61 83 2.7E-41 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Acife_0167 a327ca2e96943e8f7cc37dc6041be61f 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 31 52 2.7E-41 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Acife_0167 a327ca2e96943e8f7cc37dc6041be61f 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 200 219 2.7E-41 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Acife_0167 a327ca2e96943e8f7cc37dc6041be61f 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 143 167 2.7E-41 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Acife_0167 a327ca2e96943e8f7cc37dc6041be61f 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 180 199 2.7E-41 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Acife_0167 a327ca2e96943e8f7cc37dc6041be61f 258 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 13 256 4.5E-69 T 12-10-2018 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 Acife_0167 a327ca2e96943e8f7cc37dc6041be61f 258 PIRSF PIRSF006648 3 257 2.4E-24 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Acife_3250 962ba0ef6d87d94b961811c42ce9cd50 380 Gene3D G3DSA:3.40.50.720 12 346 1.1E-122 T 12-10-2018 Acife_3250 962ba0ef6d87d94b961811c42ce9cd50 380 Gene3D G3DSA:3.90.25.10 211 354 1.1E-122 T 12-10-2018 Acife_3250 962ba0ef6d87d94b961811c42ce9cd50 380 SUPERFAMILY SSF51735 10 371 9.93E-90 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_3250 962ba0ef6d87d94b961811c42ce9cd50 380 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Acife_3250 962ba0ef6d87d94b961811c42ce9cd50 380 Pfam PF16363 GDP-mannose 4,6 dehydratase 14 347 1.6E-93 T 12-10-2018 IPR016040 NAD(P)-binding domain Acife_3250 962ba0ef6d87d94b961811c42ce9cd50 380 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 12 361 1.3E-141 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Acife_0038 812be191a46a3b9435b1629b81065904 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 56 1.2E-14 T 12-10-2018 Acife_0038 812be191a46a3b9435b1629b81065904 83 Gene3D G3DSA:3.40.1620.10 1 40 2.8E-17 T 12-10-2018 Acife_0038 812be191a46a3b9435b1629b81065904 83 Gene3D G3DSA:1.10.1220.170 41 83 2.8E-15 T 12-10-2018 Acife_0038 812be191a46a3b9435b1629b81065904 83 SUPERFAMILY SSF143120 1 80 6.67E-26 T 12-10-2018 IPR036165 YefM-like superfamily Acife_0038 812be191a46a3b9435b1629b81065904 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 4.4E-24 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Acife_1930 f0f255785b0ca0cdeff48a2774bbc852 332 SUPERFAMILY SSF52402 9 217 7.28E-29 T 12-10-2018 Acife_1930 f0f255785b0ca0cdeff48a2774bbc852 332 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 9 228 1.9E-24 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Acife_3076 d6facf4bc7ce5cbc0e1ea4612d420898 312 SUPERFAMILY SSF56059 122 309 2.1E-51 T 12-10-2018 Acife_3076 d6facf4bc7ce5cbc0e1ea4612d420898 312 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 119 3.7E-38 T 12-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Acife_3076 d6facf4bc7ce5cbc0e1ea4612d420898 312 Gene3D G3DSA:3.30.470.20 114 294 2.7E-107 T 12-10-2018 Acife_3076 d6facf4bc7ce5cbc0e1ea4612d420898 312 TIGRFAM TIGR01380 glut_syn: glutathione synthase 4 310 1.9E-117 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Acife_3076 d6facf4bc7ce5cbc0e1ea4612d420898 312 Gene3D G3DSA:3.30.1490.20 136 200 2.7E-107 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Acife_3076 d6facf4bc7ce5cbc0e1ea4612d420898 312 Gene3D G3DSA:3.40.50.20 9 113 2.7E-107 T 12-10-2018 Acife_3076 d6facf4bc7ce5cbc0e1ea4612d420898 312 SUPERFAMILY SSF52440 4 121 1.29E-37 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Acife_3076 d6facf4bc7ce5cbc0e1ea4612d420898 312 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 295 1.1E-67 T 12-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Acife_3076 d6facf4bc7ce5cbc0e1ea4612d420898 312 Hamap MF_00162 Glutathione synthetase [gshB]. 1 312 143.93 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Acife_0206 a908a3d7307687e97a9aa07aff3daac7 135 Pfam PF10861 Protein of Unknown function (DUF2784) 8 125 1.4E-29 T 12-10-2018 IPR021218 Protein of unknown function DUF2784 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 Gene3D G3DSA:3.40.120.10 176 361 8.8E-61 T 12-10-2018 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 SUPERFAMILY SSF53738 259 364 5.49E-28 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 392 437 3.3E-12 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 6.6E-15 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 SUPERFAMILY SSF53738 156 257 3.83E-27 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 Gene3D G3DSA:3.40.120.10 258 338 8.8E-61 T 12-10-2018 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 438 6.1E-181 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 Gene3D G3DSA:3.40.120.10 2 155 2.1E-49 T 12-10-2018 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 SUPERFAMILY SSF55957 358 438 4.32E-19 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 SUPERFAMILY SSF53738 3 182 7.46E-50 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 443 45.17 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 362 6.5E-30 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 4.2E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 4.2E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 4.2E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 Gene3D G3DSA:3.30.310.50 369 444 1.9E-19 T 12-10-2018 Acife_2557 cb108c82e659c74d4f8360bc97f951ed 454 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 1.4E-44 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1931 0abf22fdd8ea0c68022ec92ca932ad70 549 Pfam PF11843 Protein of unknown function (DUF3363) 307 434 1.2E-14 T 12-10-2018 IPR021795 Protein of unknown function DUF3363 Acife_2026 3ac929489db998d5d5e79279500e9f84 233 PIRSF PIRSF001435 4 225 3.9E-67 T 12-10-2018 Acife_2026 3ac929489db998d5d5e79279500e9f84 233 SMART SM00478 38 200 1.3E-24 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Acife_2026 3ac929489db998d5d5e79279500e9f84 233 Gene3D G3DSA:1.10.1670.10 139 224 2.7E-11 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Acife_2026 3ac929489db998d5d5e79279500e9f84 233 Gene3D G3DSA:1.10.340.30 21 138 1.6E-35 T 12-10-2018 Acife_2026 3ac929489db998d5d5e79279500e9f84 233 SUPERFAMILY SSF48150 9 219 5.97E-50 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Acife_2026 3ac929489db998d5d5e79279500e9f84 233 Pfam PF00633 Helix-hairpin-helix motif 114 139 1.9E-5 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Acife_2026 3ac929489db998d5d5e79279500e9f84 233 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 177 6.1E-15 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Acife_1357 be22e4109749b7e443a5d91420bd9690 546 Pfam PF00117 Glutamine amidotransferase class-I 300 533 4.9E-53 T 12-10-2018 IPR017926 Glutamine amidotransferase Acife_1357 be22e4109749b7e443a5d91420bd9690 546 Gene3D G3DSA:3.40.50.880 285 544 5.4E-98 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_1357 be22e4109749b7e443a5d91420bd9690 546 SUPERFAMILY SSF52540 1 268 1.12E-118 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1357 be22e4109749b7e443a5d91420bd9690 546 Hamap MF_01227 CTP synthase [pyrG]. 2 539 50.522 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Acife_1357 be22e4109749b7e443a5d91420bd9690 546 Pfam PF06418 CTP synthase N-terminus 3 265 7.3E-121 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Acife_1357 be22e4109749b7e443a5d91420bd9690 546 Gene3D G3DSA:3.40.50.300 1 283 5.5E-126 T 12-10-2018 Acife_1357 be22e4109749b7e443a5d91420bd9690 546 SUPERFAMILY SSF52317 288 541 5.38E-81 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_1357 be22e4109749b7e443a5d91420bd9690 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 1.6E-236 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Acife_1640 2e7a99bd0cacba0d4e4039023c4ccff9 102 Gene3D G3DSA:3.30.70.20 19 101 1.0E-13 T 12-10-2018 Acife_1640 2e7a99bd0cacba0d4e4039023c4ccff9 102 TIGRFAM TIGR02936 fdxN_nitrog: ferredoxin III, nif-specific 5 93 8.1E-43 T 12-10-2018 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific Acife_1640 2e7a99bd0cacba0d4e4039023c4ccff9 102 SUPERFAMILY SSF54862 8 94 1.55E-17 T 12-10-2018 Acife_1640 2e7a99bd0cacba0d4e4039023c4ccff9 102 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 74 85 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_1640 2e7a99bd0cacba0d4e4039023c4ccff9 102 Pfam PF14697 4Fe-4S dicluster domain 21 89 9.6E-12 T 12-10-2018 Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 SUPERFAMILY SSF52540 147 398 1.37E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 Pfam PF01434 Peptidase family M41 388 595 5.4E-80 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 Gene3D G3DSA:3.40.50.300 142 328 4.0E-70 T 12-10-2018 Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 608 37.519 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 Pfam PF06480 FtsH Extracellular 9 97 2.4E-12 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 Gene3D G3DSA:2.40.50.920 27 102 2.6E-15 T 12-10-2018 Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 596 2.3E-237 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 Gene3D G3DSA:1.20.58.760 408 604 3.9E-72 T 12-10-2018 Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 Gene3D G3DSA:1.10.8.60 329 405 1.0E-30 T 12-10-2018 Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 326 6.7E-44 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 SMART SM00382 190 329 4.9E-24 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2559 10ad90c430efc525f13729276ed3a2a1 640 SUPERFAMILY SSF140990 408 603 6.02E-70 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Acife_0828 1295969b36112800c1aa1ca5ee6bd755 559 Pfam PF13401 AAA domain 129 278 6.6E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0828 1295969b36112800c1aa1ca5ee6bd755 559 Gene3D G3DSA:3.40.50.300 121 291 7.7E-9 T 12-10-2018 Acife_0828 1295969b36112800c1aa1ca5ee6bd755 559 SUPERFAMILY SSF52540 129 370 8.9E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2878 61edc612f1bb04c95d9de143c51cf3a5 184 Pfam PF14279 HNH endonuclease 90 144 5.7E-17 T 12-10-2018 IPR029471 HNH endonuclease 5 Acife_2878 61edc612f1bb04c95d9de143c51cf3a5 184 Gene3D G3DSA:3.30.40.60 64 162 1.0E-24 T 12-10-2018 Acife_2878 61edc612f1bb04c95d9de143c51cf3a5 184 SMART SM00507 77 130 4.1E-13 T 12-10-2018 IPR003615 HNH nuclease Acife_1092 9a032a5833438b18f88423d0c5a3d998 769 Hamap MF_00970 Ribonuclease E [rne]. 1 764 28.789 T 12-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 Acife_1092 9a032a5833438b18f88423d0c5a3d998 769 Pfam PF10150 Ribonuclease E/G family 119 388 1.4E-95 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Acife_1092 9a032a5833438b18f88423d0c5a3d998 769 Gene3D G3DSA:3.40.1260.20 398 501 1.5E-30 T 12-10-2018 Acife_1092 9a032a5833438b18f88423d0c5a3d998 769 SMART SM00316 37 117 1.6E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 Acife_1092 9a032a5833438b18f88423d0c5a3d998 769 SUPERFAMILY SSF50249 40 123 1.03E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1092 9a032a5833438b18f88423d0c5a3d998 769 Pfam PF00575 S1 RNA binding domain 36 116 7.3E-13 T 12-10-2018 IPR003029 S1 domain GO:0003676 Acife_1092 9a032a5833438b18f88423d0c5a3d998 769 Gene3D G3DSA:2.40.50.140 31 123 1.5E-32 T 12-10-2018 Acife_1092 9a032a5833438b18f88423d0c5a3d998 769 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 8.4E-161 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 Pfam PF00490 Delta-aminolevulinic acid dehydratase 11 328 3.1E-138 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 SUPERFAMILY SSF51569 8 329 4.4E-133 T 12-10-2018 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 248 260 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 Gene3D G3DSA:3.20.20.70 1 330 3.5E-139 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 SMART SM01004 7 329 4.0E-203 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 PIRSF PIRSF001415 2 330 1.7E-139 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 273 288 6.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 248 264 6.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 196 215 6.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 158 177 6.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 303 322 6.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Acife_3256 e9adee62e6e25a712ef71d49abc96df8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 127 141 6.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 Pfam PF13180 PDZ domain 297 387 1.2E-13 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 61 499 7.7E-134 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 Pfam PF13365 Trypsin-like peptidase domain 125 258 3.5E-31 T 12-10-2018 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 SUPERFAMILY SSF50494 60 288 4.71E-61 T 12-10-2018 IPR009003 Peptidase S1, PA clan Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 PRINTS PR00834 HtrA/DegQ protease family signature 251 268 1.5E-39 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 1.5E-39 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 PRINTS PR00834 HtrA/DegQ protease family signature 155 175 1.5E-39 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 PRINTS PR00834 HtrA/DegQ protease family signature 195 219 1.5E-39 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 PRINTS PR00834 HtrA/DegQ protease family signature 134 146 1.5E-39 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 PRINTS PR00834 HtrA/DegQ protease family signature 337 349 1.5E-39 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 SMART SM00228 414 493 8.7E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 SMART SM00228 297 379 2.1E-10 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 Gene3D G3DSA:2.40.10.120 60 290 4.2E-75 T 12-10-2018 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 SUPERFAMILY SSF50156 255 378 9.07E-22 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 Gene3D G3DSA:2.30.42.10 414 505 4.5E-16 T 12-10-2018 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 Gene3D G3DSA:2.30.42.10 297 395 3.9E-23 T 12-10-2018 Acife_0296 a2ad455963d584ae817aefee7cf7c4ce 505 SUPERFAMILY SSF50156 415 503 4.34E-13 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Acife_2622 650112aecc6fb85dcb111100ecb78892 736 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 310 626 9.0E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_2622 650112aecc6fb85dcb111100ecb78892 736 SUPERFAMILY SSF51905 310 640 5.64E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2622 650112aecc6fb85dcb111100ecb78892 736 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 598 605 2.0E-7 T 12-10-2018 Acife_2622 650112aecc6fb85dcb111100ecb78892 736 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 332 2.0E-7 T 12-10-2018 Acife_2622 650112aecc6fb85dcb111100ecb78892 736 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 462 487 2.0E-7 T 12-10-2018 Acife_2622 650112aecc6fb85dcb111100ecb78892 736 Gene3D G3DSA:3.50.50.100 307 705 8.5E-118 T 12-10-2018 Acife_2622 650112aecc6fb85dcb111100ecb78892 736 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 583 605 7.0E-12 T 12-10-2018 Acife_2622 650112aecc6fb85dcb111100ecb78892 736 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 311 330 7.0E-12 T 12-10-2018 Acife_2622 650112aecc6fb85dcb111100ecb78892 736 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 462 480 7.0E-12 T 12-10-2018 Acife_2622 650112aecc6fb85dcb111100ecb78892 736 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 402 420 7.0E-12 T 12-10-2018 Acife_2622 650112aecc6fb85dcb111100ecb78892 736 Pfam PF07681 DoxX 44 123 1.2E-10 T 12-10-2018 IPR032808 DoxX family Acife_1515 6697001d6a629534750269fc0dddf537 366 SUPERFAMILY SSF51604 21 138 9.18E-10 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Acife_1515 6697001d6a629534750269fc0dddf537 366 Gene3D G3DSA:3.30.413.10 262 362 2.3E-28 T 12-10-2018 Acife_1515 6697001d6a629534750269fc0dddf537 366 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 8.2E-132 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Acife_1515 6697001d6a629534750269fc0dddf537 366 Pfam PF04551 GcpE protein 12 353 1.7E-136 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Acife_1515 6697001d6a629534750269fc0dddf537 366 PIRSF PIRSF004640 1 363 3.3E-152 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Acife_1515 6697001d6a629534750269fc0dddf537 366 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 360 35.665 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Acife_1515 6697001d6a629534750269fc0dddf537 366 SUPERFAMILY SSF56014 266 353 1.41E-11 T 12-10-2018 Acife_1515 6697001d6a629534750269fc0dddf537 366 Gene3D G3DSA:3.20.20.20 1 261 2.6E-109 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Acife_2256 d27324871aa98f96ff0f10fab28b60ca 84 SUPERFAMILY SSF143120 12 71 1.57E-5 T 12-10-2018 IPR036165 YefM-like superfamily Acife_2256 d27324871aa98f96ff0f10fab28b60ca 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 12 78 1.5E-6 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Acife_3141 50349e7538a921144b37bd97fb1cbb8d 82 Gene3D G3DSA:2.40.50.220 1 82 7.6E-32 T 12-10-2018 IPR036677 EutN/Ccml superfamily Acife_3141 50349e7538a921144b37bd97fb1cbb8d 82 TIGRFAM TIGR02703 carboxysome_A: carboxysome peptide A 1 80 9.5E-51 T 12-10-2018 IPR014076 Carboxysome peptide A Acife_3141 50349e7538a921144b37bd97fb1cbb8d 82 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 82 1.0E-35 T 12-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Acife_3141 50349e7538a921144b37bd97fb1cbb8d 82 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 77 2.0E-21 T 12-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Acife_3141 50349e7538a921144b37bd97fb1cbb8d 82 SUPERFAMILY SSF159133 1 81 1.7E-24 T 12-10-2018 IPR036677 EutN/Ccml superfamily Acife_1657 be5a2c288ed049855e7995c4f8f6b0cf 111 SUPERFAMILY SSF89360 1 97 1.2E-23 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Acife_1657 be5a2c288ed049855e7995c4f8f6b0cf 111 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 104 4.0E-21 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Acife_1657 be5a2c288ed049855e7995c4f8f6b0cf 111 Gene3D G3DSA:2.60.300.12 2 110 3.7E-28 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Acife_1657 be5a2c288ed049855e7995c4f8f6b0cf 111 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 4 108 1.5E-27 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Acife_1010 12c26274f987bc0299aeb7888e641fd0 215 SUPERFAMILY SSF52016 1 199 2.35E-58 T 12-10-2018 Acife_1010 12c26274f987bc0299aeb7888e641fd0 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 190 3.2E-77 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Acife_1010 12c26274f987bc0299aeb7888e641fd0 215 Gene3D G3DSA:3.20.19.10 1 182 2.6E-72 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Acife_1010 12c26274f987bc0299aeb7888e641fd0 215 Pfam PF00694 Aconitase C-terminal domain 1 125 1.2E-36 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Acife_1010 12c26274f987bc0299aeb7888e641fd0 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 204 41.162 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Acife_2609 69b092da89953e071beb8ecef62adf71 95 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 7 75 3.2E-10 T 12-10-2018 IPR003746 Protein of unknown function DUF167 Acife_2609 69b092da89953e071beb8ecef62adf71 95 SUPERFAMILY SSF69786 3 83 5.49E-13 T 12-10-2018 IPR036591 YggU-like superfamily Acife_2609 69b092da89953e071beb8ecef62adf71 95 SMART SM01152 3 79 3.8E-6 T 12-10-2018 IPR003746 Protein of unknown function DUF167 Acife_2609 69b092da89953e071beb8ecef62adf71 95 Gene3D G3DSA:3.30.1200.10 1 93 1.8E-11 T 12-10-2018 IPR036591 YggU-like superfamily Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 Pfam PF00391 PEP-utilising enzyme, mobile domain 390 461 1.6E-26 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 SUPERFAMILY SSF52009 355 473 9.16E-33 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 420 431 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 SUPERFAMILY SSF56059 3 389 1.29E-104 T 12-10-2018 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 349 1.1E-115 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 Gene3D G3DSA:3.20.20.60 484 795 3.8E-96 T 12-10-2018 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 Gene3D G3DSA:3.50.30.10 363 471 1.3E-38 T 12-10-2018 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 PIRSF PIRSF000854 1 800 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 Gene3D G3DSA:3.30.1490.20 1 194 2.0E-69 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 701 719 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 797 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 Gene3D G3DSA:3.30.470.20 195 362 6.5E-55 T 12-10-2018 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 485 793 1.8E-58 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Acife_2009 f14a721d56dfea60d4c3ec80fe3b108f 803 SUPERFAMILY SSF51621 468 798 4.45E-94 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Acife_2224 45ee8003bef562237e155903fe48d8e3 91 SUPERFAMILY SSF63562 1 66 2.35E-23 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Acife_2224 45ee8003bef562237e155903fe48d8e3 91 SMART SM01409 8 60 1.4E-17 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Acife_2224 45ee8003bef562237e155903fe48d8e3 91 Gene3D G3DSA:3.90.940.10 1 86 2.1E-24 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Acife_2224 45ee8003bef562237e155903fe48d8e3 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.978 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2224 45ee8003bef562237e155903fe48d8e3 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 3.0E-20 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Acife_2224 45ee8003bef562237e155903fe48d8e3 91 Pfam PF01192 RNA polymerase Rpb6 8 58 1.8E-16 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Acife_3217 486bdf96a4e5626a81892de152521f0b 110 Pfam PF10387 Protein of unknown function (DUF2442) 27 101 9.3E-13 T 12-10-2018 IPR018841 Protein of unknown function DUF2442 Acife_3217 486bdf96a4e5626a81892de152521f0b 110 Gene3D G3DSA:3.30.2020.10 22 103 1.7E-5 T 12-10-2018 IPR036782 NE0471-like, N-terminal Acife_3217 486bdf96a4e5626a81892de152521f0b 110 SUPERFAMILY SSF143880 24 103 3.53E-17 T 12-10-2018 IPR036782 NE0471-like, N-terminal Acife_2374 4bc63f2822a46a1533d693025a177d64 388 Gene3D G3DSA:3.40.50.300 206 367 8.4E-13 T 12-10-2018 Acife_2374 4bc63f2822a46a1533d693025a177d64 388 PIRSF PIRSF029347 1 373 5.2E-56 T 12-10-2018 IPR014555 RecF-like Acife_2374 4bc63f2822a46a1533d693025a177d64 388 Gene3D G3DSA:3.40.50.300 1 164 1.3E-11 T 12-10-2018 Acife_2374 4bc63f2822a46a1533d693025a177d64 388 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 26 336 7.1E-37 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_2374 4bc63f2822a46a1533d693025a177d64 388 SUPERFAMILY SSF52540 1 377 2.71E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1461 ba3b1d8f9a4875127f7c2cc61d09830d 394 Pfam PF07690 Major Facilitator Superfamily 12 241 1.3E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_1461 ba3b1d8f9a4875127f7c2cc61d09830d 394 Gene3D G3DSA:1.20.1250.20 9 157 1.3E-16 T 12-10-2018 Acife_1461 ba3b1d8f9a4875127f7c2cc61d09830d 394 Gene3D G3DSA:1.20.1250.20 191 392 2.1E-42 T 12-10-2018 Acife_1461 ba3b1d8f9a4875127f7c2cc61d09830d 394 SUPERFAMILY SSF103473 18 380 4.05E-39 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_1784 4c7e197fd9e7668b35159874d1bcff28 302 Gene3D G3DSA:1.10.8.300 195 294 6.8E-21 T 12-10-2018 Acife_1784 4c7e197fd9e7668b35159874d1bcff28 302 SUPERFAMILY SSF52540 21 278 1.05E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1784 4c7e197fd9e7668b35159874d1bcff28 302 Gene3D G3DSA:3.40.50.300 17 181 1.0E-40 T 12-10-2018 Acife_1784 4c7e197fd9e7668b35159874d1bcff28 302 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 4.3E-56 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Acife_1784 4c7e197fd9e7668b35159874d1bcff28 302 PIRSF PIRSF002849 3 297 7.2E-107 T 12-10-2018 Acife_1784 4c7e197fd9e7668b35159874d1bcff28 302 SMART SM00382 32 173 4.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0231 d3b74cd16ac62c375676c7a1b64adb83 131 Gene3D G3DSA:3.30.310.70 6 129 2.5E-44 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_0231 d3b74cd16ac62c375676c7a1b64adb83 131 PIRSF PIRSF021774 1 131 1.9E-42 T 12-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 Acife_0231 d3b74cd16ac62c375676c7a1b64adb83 131 Pfam PF03625 Domain of unknown function DUF302 36 99 1.8E-27 T 12-10-2018 IPR005180 Domain of unknown function DUF302 Acife_0231 d3b74cd16ac62c375676c7a1b64adb83 131 SUPERFAMILY SSF103247 5 129 6.54E-36 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_2323 0fc837cd99fc74b69480678101ac0543 441 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 38 404 2.0E-104 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase Acife_2323 0fc837cd99fc74b69480678101ac0543 441 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 96 317 2.4E-40 T 12-10-2018 IPR000477 Reverse transcriptase domain Acife_2323 0fc837cd99fc74b69480678101ac0543 441 Pfam PF08388 Group II intron, maturase-specific domain 340 409 1.3E-13 T 12-10-2018 IPR013597 Group II intron, maturase-specific Acife_2323 0fc837cd99fc74b69480678101ac0543 441 SUPERFAMILY SSF56672 44 401 3.08E-50 T 12-10-2018 Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 308 2.7E-49 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 SMART SM01086 315 410 4.7E-37 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 Pfam PF06689 ClpX C4-type zinc finger 13 49 4.9E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 SUPERFAMILY SSF57716 13 48 1.05E-11 T 12-10-2018 Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 Gene3D G3DSA:1.10.8.60 314 421 6.1E-42 T 12-10-2018 Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 Gene3D G3DSA:3.30.50.30 3 52 7.6E-24 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 409 2.3E-202 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 Gene3D G3DSA:3.40.50.300 57 313 2.1E-106 T 12-10-2018 Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 SMART SM00994 12 51 3.3E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 SUPERFAMILY SSF52540 61 398 6.38E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 315 391 1.1E-16 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 SMART SM00382 110 265 3.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1402 7d4124084ce09dba5f8f5d6b13282eb3 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 3 413 53.0 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Acife_2648 8064a85df7b73c0133513287b343e755 294 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 5 212 1.0E-79 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2648 8064a85df7b73c0133513287b343e755 294 SUPERFAMILY SSF88697 233 292 1.04E-9 T 12-10-2018 IPR015947 PUA-like superfamily Acife_2648 8064a85df7b73c0133513287b343e755 294 Gene3D G3DSA:2.30.130.10 235 293 8.8E-18 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 Acife_2648 8064a85df7b73c0133513287b343e755 294 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 26 173 5.8E-55 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Acife_2648 8064a85df7b73c0133513287b343e755 294 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 234 290 2.0E-15 T 12-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2648 8064a85df7b73c0133513287b343e755 294 Gene3D G3DSA:3.30.2350.10 2 234 5.6E-90 T 12-10-2018 Acife_2648 8064a85df7b73c0133513287b343e755 294 SUPERFAMILY SSF55120 5 217 2.88E-79 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2648 8064a85df7b73c0133513287b343e755 294 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 4 291 19.135 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Acife_2648 8064a85df7b73c0133513287b343e755 294 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 174 219 5.8E-15 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Acife_0261 3e30ff37816bbe341b6beb99b57efb37 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 248 544 1.1E-62 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Acife_0261 3e30ff37816bbe341b6beb99b57efb37 584 Gene3D G3DSA:3.30.450.330 227 546 7.2E-86 T 12-10-2018 Acife_0261 3e30ff37816bbe341b6beb99b57efb37 584 SUPERFAMILY SSF56601 174 559 3.24E-78 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Acife_0261 3e30ff37816bbe341b6beb99b57efb37 584 Gene3D G3DSA:3.90.1310.30 53 222 7.5E-36 T 12-10-2018 Acife_0261 3e30ff37816bbe341b6beb99b57efb37 584 SUPERFAMILY SSF56519 54 223 3.92E-34 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Acife_0261 3e30ff37816bbe341b6beb99b57efb37 584 Gene3D G3DSA:3.40.710.10 285 465 7.2E-86 T 12-10-2018 Acife_0261 3e30ff37816bbe341b6beb99b57efb37 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 206 2.7E-13 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Acife_1227 1007228abb50bd03ac83b4be77351727 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 245 4.1E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Acife_1227 1007228abb50bd03ac83b4be77351727 267 SUPERFAMILY SSF161098 15 255 5.89E-42 T 12-10-2018 IPR035906 MetI-like superfamily Acife_1227 1007228abb50bd03ac83b4be77351727 267 Gene3D G3DSA:1.10.3720.10 17 265 4.0E-51 T 12-10-2018 IPR035906 MetI-like superfamily Acife_2341 61ca58411d90b00defe9e37e7d8da9bf 453 TIGRFAM TIGR03105 gln_synth_III: glutamine synthetase, type III 14 449 2.9E-188 T 12-10-2018 IPR017536 Glutamine synthetase, type III Acife_2341 61ca58411d90b00defe9e37e7d8da9bf 453 SUPERFAMILY SSF54368 10 93 1.28E-10 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Acife_2341 61ca58411d90b00defe9e37e7d8da9bf 453 Pfam PF00120 Glutamine synthetase, catalytic domain 105 449 3.4E-92 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Acife_2341 61ca58411d90b00defe9e37e7d8da9bf 453 SUPERFAMILY SSF55931 105 449 4.32E-93 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Acife_2341 61ca58411d90b00defe9e37e7d8da9bf 453 Gene3D G3DSA:3.10.20.70 6 102 4.6E-5 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Acife_2341 61ca58411d90b00defe9e37e7d8da9bf 453 SMART SM01230 103 363 6.2E-89 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Acife_2341 61ca58411d90b00defe9e37e7d8da9bf 453 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Acife_2341 61ca58411d90b00defe9e37e7d8da9bf 453 Gene3D G3DSA:3.30.590.10 107 453 4.1E-103 T 12-10-2018 Acife_0161 188f7d71177782dc716f0d6b664916f0 1080 SMART SM00487 309 507 6.5E-6 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_0161 188f7d71177782dc716f0d6b664916f0 1080 Gene3D G3DSA:3.40.50.300 313 495 4.0E-47 T 12-10-2018 Acife_0161 188f7d71177782dc716f0d6b664916f0 1080 Pfam PF11867 Domain of unknown function (DUF3387) 783 964 8.4E-7 T 12-10-2018 IPR021810 Protein of unknown function DUF3387 Acife_0161 188f7d71177782dc716f0d6b664916f0 1080 Pfam PF04851 Type III restriction enzyme, res subunit 314 476 4.5E-13 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Acife_0161 188f7d71177782dc716f0d6b664916f0 1080 Gene3D G3DSA:3.40.50.300 496 740 4.8E-32 T 12-10-2018 Acife_0161 188f7d71177782dc716f0d6b664916f0 1080 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 15 225 1.4E-35 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Acife_0161 188f7d71177782dc716f0d6b664916f0 1080 SUPERFAMILY SSF52540 280 532 3.8E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0161 188f7d71177782dc716f0d6b664916f0 1080 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 25 739 1.5E-143 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 Acife_0161 188f7d71177782dc716f0d6b664916f0 1080 Gene3D G3DSA:3.90.1570.50 91 246 8.1E-23 T 12-10-2018 Acife_1239 d2c079a1dcd723664b287968a22b0e49 303 Gene3D G3DSA:1.10.10.10 4 92 2.9E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1239 d2c079a1dcd723664b287968a22b0e49 303 SUPERFAMILY SSF53850 95 297 8.4E-53 T 12-10-2018 Acife_1239 d2c079a1dcd723664b287968a22b0e49 303 Gene3D G3DSA:3.40.190.290 95 300 8.4E-48 T 12-10-2018 Acife_1239 d2c079a1dcd723664b287968a22b0e49 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_1239 d2c079a1dcd723664b287968a22b0e49 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_1239 d2c079a1dcd723664b287968a22b0e49 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_1239 d2c079a1dcd723664b287968a22b0e49 303 Pfam PF03466 LysR substrate binding domain 93 295 5.5E-59 T 12-10-2018 IPR005119 LysR, substrate-binding Acife_1239 d2c079a1dcd723664b287968a22b0e49 303 SUPERFAMILY SSF46785 2 87 1.21E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1239 d2c079a1dcd723664b287968a22b0e49 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.0E-23 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0641 1e274944d216772cf280a1f1d5d17735 167 PRINTS PR01576 Peptide deformylase signature 106 124 1.3E-26 T 12-10-2018 IPR023635 Peptide deformylase Acife_0641 1e274944d216772cf280a1f1d5d17735 167 PRINTS PR01576 Peptide deformylase signature 34 63 1.3E-26 T 12-10-2018 IPR023635 Peptide deformylase Acife_0641 1e274944d216772cf280a1f1d5d17735 167 PRINTS PR01576 Peptide deformylase signature 94 105 1.3E-26 T 12-10-2018 IPR023635 Peptide deformylase Acife_0641 1e274944d216772cf280a1f1d5d17735 167 PRINTS PR01576 Peptide deformylase signature 125 154 1.3E-26 T 12-10-2018 IPR023635 Peptide deformylase Acife_0641 1e274944d216772cf280a1f1d5d17735 167 Hamap MF_00163 Peptide deformylase [def]. 2 167 27.385 T 12-10-2018 IPR023635 Peptide deformylase Acife_0641 1e274944d216772cf280a1f1d5d17735 167 PIRSF PIRSF004749 1 167 1.5E-52 T 12-10-2018 IPR023635 Peptide deformylase Acife_0641 1e274944d216772cf280a1f1d5d17735 167 SUPERFAMILY SSF56420 2 165 3.01E-52 T 12-10-2018 IPR036821 Peptide deformylase superfamily Acife_0641 1e274944d216772cf280a1f1d5d17735 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 163 8.6E-44 T 12-10-2018 IPR023635 Peptide deformylase Acife_0641 1e274944d216772cf280a1f1d5d17735 167 Gene3D G3DSA:3.90.45.10 1 167 1.5E-51 T 12-10-2018 IPR036821 Peptide deformylase superfamily Acife_0641 1e274944d216772cf280a1f1d5d17735 167 Pfam PF01327 Polypeptide deformylase 4 155 6.2E-47 T 12-10-2018 IPR023635 Peptide deformylase Acife_0782 88e80696fa1e62832b680a7c23d6ea32 173 Gene3D G3DSA:3.40.30.10 40 172 3.5E-30 T 12-10-2018 Acife_0782 88e80696fa1e62832b680a7c23d6ea32 173 Pfam PF00578 AhpC/TSA family 39 150 3.6E-17 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Acife_0782 88e80696fa1e62832b680a7c23d6ea32 173 SUPERFAMILY SSF52833 12 162 1.35E-27 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1358 5468388cd672b27fcb383a4e565dbca2 281 Gene3D G3DSA:3.20.20.70 3 274 1.7E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1358 5468388cd672b27fcb383a4e565dbca2 281 SUPERFAMILY SSF51569 2 270 6.23E-109 T 12-10-2018 Acife_1358 5468388cd672b27fcb383a4e565dbca2 281 Pfam PF00793 DAHP synthetase I family 8 268 1.2E-70 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Acife_1358 5468388cd672b27fcb383a4e565dbca2 281 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 268 1.7E-126 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Acife_1358 5468388cd672b27fcb383a4e565dbca2 281 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 52.762 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Acife_2772 311f4315d4cc313fe2f271c1f4d24f98 215 Gene3D G3DSA:1.10.357.10 68 209 5.4E-24 T 12-10-2018 Acife_2772 311f4315d4cc313fe2f271c1f4d24f98 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.9E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Acife_2772 311f4315d4cc313fe2f271c1f4d24f98 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.9E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Acife_2772 311f4315d4cc313fe2f271c1f4d24f98 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 5.9E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Acife_2772 311f4315d4cc313fe2f271c1f4d24f98 215 SUPERFAMILY SSF48498 87 202 5.24E-17 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Acife_2772 311f4315d4cc313fe2f271c1f4d24f98 215 SUPERFAMILY SSF46689 11 86 1.05E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_2772 311f4315d4cc313fe2f271c1f4d24f98 215 Gene3D G3DSA:1.10.10.60 11 62 1.9E-19 T 12-10-2018 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 Gene3D G3DSA:1.10.730.10 567 804 1.4E-68 T 12-10-2018 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 Gene3D G3DSA:3.40.50.620 8 197 8.0E-60 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_1214 2dc4a731ad265952afd891a099df30a5 938 SUPERFAMILY SSF46589 871 935 1.94E-11 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 Gene3D G3DSA:1.10.287.380 864 936 5.4E-17 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 SUPERFAMILY SSF50677 192 355 4.71E-56 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 PRINTS PR00986 Valyl-tRNA synthetase signature 461 482 4.0E-36 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 PRINTS PR00986 Valyl-tRNA synthetase signature 37 48 4.0E-36 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 PRINTS PR00986 Valyl-tRNA synthetase signature 492 510 4.0E-36 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 4.0E-36 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 PRINTS PR00986 Valyl-tRNA synthetase signature 359 372 4.0E-36 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 617 1.5E-203 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 918 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 55 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 871 935 1.1E-11 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 SUPERFAMILY SSF47323 628 886 1.23E-60 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 Pfam PF08264 Anticodon-binding domain of tRNA 658 809 2.3E-41 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 SUPERFAMILY SSF52374 9 627 1.1E-130 T 12-10-2018 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 936 15.611 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 Gene3D G3DSA:3.90.740.10 198 345 1.2E-47 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Acife_1214 2dc4a731ad265952afd891a099df30a5 938 Gene3D G3DSA:3.40.50.620 346 564 4.9E-64 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2638 95063e2ae4ac86b1dd205e18d27f06af 399 Gene3D G3DSA:3.40.50.620 3 174 1.7E-70 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2638 95063e2ae4ac86b1dd205e18d27f06af 399 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 116 127 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Acife_2638 95063e2ae4ac86b1dd205e18d27f06af 399 TIGRFAM TIGR00032 argG: argininosuccinate synthase 4 394 2.8E-145 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Acife_2638 95063e2ae4ac86b1dd205e18d27f06af 399 Hamap MF_00005 Argininosuccinate synthase [argG]. 2 399 53.755 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Acife_2638 95063e2ae4ac86b1dd205e18d27f06af 399 SUPERFAMILY SSF52402 3 206 6.84E-52 T 12-10-2018 Acife_2638 95063e2ae4ac86b1dd205e18d27f06af 399 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 8 16 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Acife_2638 95063e2ae4ac86b1dd205e18d27f06af 399 Pfam PF00764 Arginosuccinate synthase 6 393 9.3E-160 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Acife_2638 95063e2ae4ac86b1dd205e18d27f06af 399 Gene3D G3DSA:3.90.1260.10 175 399 4.2E-101 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Acife_2638 95063e2ae4ac86b1dd205e18d27f06af 399 SUPERFAMILY SSF69864 174 397 3.66E-94 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PIRSF PIRSF000350 1 446 9.4E-87 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 448 1.7E-30 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 4.4E-30 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 4.4E-30 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 4.4E-30 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 4.4E-30 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.4E-30 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 SUPERFAMILY SSF51905 1 364 1.56E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 1.8E-68 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 1.8E-68 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.8E-68 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 1.8E-68 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 1.8E-68 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.8E-68 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.8E-68 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.8E-68 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 1.8E-68 T 12-10-2018 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 449 2.3E-186 T 12-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 2.2E-63 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 Gene3D G3DSA:3.30.390.30 337 449 4.2E-42 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 SUPERFAMILY SSF55424 337 449 3.78E-31 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 Gene3D G3DSA:3.50.50.60 5 321 3.6E-112 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 Gene3D G3DSA:3.50.50.60 143 260 3.6E-112 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2671 c186c2e3338534840aa3a235cc6a7ca6 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Acife_0897 adde6cfd78f53c0689d6a2bb73e93add 248 Pfam PF01292 Prokaryotic cytochrome b561 14 199 1.3E-22 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Acife_0897 adde6cfd78f53c0689d6a2bb73e93add 248 Gene3D G3DSA:1.20.950.20 4 188 5.0E-33 T 12-10-2018 Acife_0897 adde6cfd78f53c0689d6a2bb73e93add 248 SUPERFAMILY SSF81342 13 205 2.82E-28 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Acife_0501 adde6cfd78f53c0689d6a2bb73e93add 248 Pfam PF01292 Prokaryotic cytochrome b561 14 199 1.3E-22 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Acife_0501 adde6cfd78f53c0689d6a2bb73e93add 248 Gene3D G3DSA:1.20.950.20 4 188 5.0E-33 T 12-10-2018 Acife_0501 adde6cfd78f53c0689d6a2bb73e93add 248 SUPERFAMILY SSF81342 13 205 2.82E-28 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Acife_1232 9a8a778d451d9bd4c8de0b8c70fe7f59 343 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 7 342 3.8E-112 T 12-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 Acife_1232 9a8a778d451d9bd4c8de0b8c70fe7f59 343 SUPERFAMILY SSF55909 3 343 7.85E-118 T 12-10-2018 Acife_1232 9a8a778d451d9bd4c8de0b8c70fe7f59 343 Gene3D G3DSA:3.75.10.10 2 343 2.0E-119 T 12-10-2018 Acife_2898 cdf7b47264045153b58bf42e2f47f26d 140 Pfam PF03610 PTS system fructose IIA component 4 105 6.9E-12 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Acife_2898 cdf7b47264045153b58bf42e2f47f26d 140 SUPERFAMILY SSF53062 1 126 3.66E-23 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Acife_2898 cdf7b47264045153b58bf42e2f47f26d 140 Gene3D G3DSA:3.40.50.510 1 133 3.3E-24 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Acife_2949 672cee79a0e506adb8dbe1ce56114fea 440 SUPERFAMILY SSF46689 45 134 2.15E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_2949 672cee79a0e506adb8dbe1ce56114fea 440 Pfam PF00665 Integrase core domain 156 272 1.1E-23 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_2949 672cee79a0e506adb8dbe1ce56114fea 440 SUPERFAMILY SSF53098 159 322 9.74E-30 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_2949 672cee79a0e506adb8dbe1ce56114fea 440 Pfam PF13565 Homeodomain-like domain 54 130 6.5E-12 T 12-10-2018 Acife_2949 672cee79a0e506adb8dbe1ce56114fea 440 Gene3D G3DSA:3.30.420.10 144 332 5.7E-24 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_0757 cabf92377b3f4f530b79029bbf9e2a6e 219 Gene3D G3DSA:3.10.290.30 2 198 9.0E-42 T 12-10-2018 IPR024047 MM3350-like superfamily Acife_0757 cabf92377b3f4f530b79029bbf9e2a6e 219 SUPERFAMILY SSF159941 8 142 7.85E-43 T 12-10-2018 IPR024047 MM3350-like superfamily Acife_0757 cabf92377b3f4f530b79029bbf9e2a6e 219 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 9 197 1.3E-41 T 12-10-2018 IPR012912 Plasmid pRiA4b, Orf3 Acife_1812 6652aff8bd249db52b070e015e122f23 530 Pfam PF00005 ABC transporter 336 467 4.9E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_1812 6652aff8bd249db52b070e015e122f23 530 SUPERFAMILY SSF52540 296 523 2.98E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1812 6652aff8bd249db52b070e015e122f23 530 Pfam PF00005 ABC transporter 18 184 5.5E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_1812 6652aff8bd249db52b070e015e122f23 530 SMART SM00382 344 512 9.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1812 6652aff8bd249db52b070e015e122f23 530 SMART SM00382 26 245 8.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1812 6652aff8bd249db52b070e015e122f23 530 Gene3D G3DSA:3.40.50.300 286 529 3.3E-54 T 12-10-2018 Acife_1812 6652aff8bd249db52b070e015e122f23 530 SUPERFAMILY SSF52540 6 238 3.84E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1812 6652aff8bd249db52b070e015e122f23 530 Gene3D G3DSA:3.40.50.300 4 285 1.9E-59 T 12-10-2018 Acife_1812 6652aff8bd249db52b070e015e122f23 530 Pfam PF12848 ABC transporter 224 306 3.9E-21 T 12-10-2018 IPR032781 ABC-transporter extension domain Acife_2928 00fa47e312aff25234f8a695f5ee0179 123 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 71 5.7E-17 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Acife_2928 00fa47e312aff25234f8a695f5ee0179 123 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 116 13.598 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Acife_2928 00fa47e312aff25234f8a695f5ee0179 123 Pfam PF02416 mttA/Hcf106 family 5 52 6.4E-9 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Acife_2928 00fa47e312aff25234f8a695f5ee0179 123 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.8E-15 T 12-10-2018 Acife_2928 00fa47e312aff25234f8a695f5ee0179 123 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.8E-15 T 12-10-2018 Acife_2928 00fa47e312aff25234f8a695f5ee0179 123 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.8E-15 T 12-10-2018 Acife_0121 83ff2e851aafdcba6758b26096bf2522 104 SUPERFAMILY SSF54913 5 100 9.64E-26 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Acife_0121 83ff2e851aafdcba6758b26096bf2522 104 Gene3D G3DSA:3.30.70.120 1 103 6.5E-28 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Acife_0121 83ff2e851aafdcba6758b26096bf2522 104 Pfam PF02641 Uncharacterized ACR, COG1993 6 98 1.2E-25 T 12-10-2018 IPR003793 Domain of unknown function DUF190 Acife_2258 7b4dd3c9ef20ed618f9944c73d21b12c 1025 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 16 694 8.2E-165 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 Acife_2258 7b4dd3c9ef20ed618f9944c73d21b12c 1025 Gene3D G3DSA:3.40.50.300 438 698 3.6E-39 T 12-10-2018 Acife_2258 7b4dd3c9ef20ed618f9944c73d21b12c 1025 SMART SM00487 245 453 3.0E-11 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_2258 7b4dd3c9ef20ed618f9944c73d21b12c 1025 Gene3D G3DSA:3.40.50.300 249 436 1.4E-51 T 12-10-2018 Acife_2258 7b4dd3c9ef20ed618f9944c73d21b12c 1025 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 12 197 2.1E-34 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Acife_2258 7b4dd3c9ef20ed618f9944c73d21b12c 1025 Gene3D G3DSA:3.90.1570.50 94 245 3.9E-20 T 12-10-2018 Acife_2258 7b4dd3c9ef20ed618f9944c73d21b12c 1025 Pfam PF04851 Type III restriction enzyme, res subunit 248 416 6.5E-16 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Acife_2258 7b4dd3c9ef20ed618f9944c73d21b12c 1025 SUPERFAMILY SSF52540 213 423 1.07E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2330 669720968ead1115e225897f12b74acf 507 Pfam PF13701 Transposase DDE domain group 1 76 461 4.9E-27 T 12-10-2018 IPR025668 Transposase DDE domain Acife_0202 ef9d8de92602b481d8ae27df2b181a6e 132 SUPERFAMILY SSF54593 4 125 1.33E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_0202 ef9d8de92602b481d8ae27df2b181a6e 132 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Acife_0202 ef9d8de92602b481d8ae27df2b181a6e 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 122 8.7E-10 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Acife_0202 ef9d8de92602b481d8ae27df2b181a6e 132 Gene3D G3DSA:3.10.180.10 7 131 2.1E-37 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_1517 e287096aa0240eae5352cc83b2cefad6 203 Pfam PF09976 Tetratricopeptide repeat-like domain 9 200 1.6E-40 T 12-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 Acife_1517 e287096aa0240eae5352cc83b2cefad6 203 PIRSF PIRSF006170 3 203 4.8E-47 T 12-10-2018 IPR026039 Uncharacterised protein family UPF0070 Acife_1517 e287096aa0240eae5352cc83b2cefad6 203 Gene3D G3DSA:1.25.40.10 32 156 2.6E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1517 e287096aa0240eae5352cc83b2cefad6 203 SUPERFAMILY SSF48452 37 193 3.52E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0571 0811d597f33f41d3604c3772165a9bdc 94 Gene3D G3DSA:3.30.110.60 1 94 1.8E-30 T 12-10-2018 IPR035920 YhbY-like superfamily Acife_0571 0811d597f33f41d3604c3772165a9bdc 94 SUPERFAMILY SSF75471 1 90 3.27E-26 T 12-10-2018 IPR035920 YhbY-like superfamily Acife_0571 0811d597f33f41d3604c3772165a9bdc 94 SMART SM01103 2 85 4.0E-34 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Acife_0571 0811d597f33f41d3604c3772165a9bdc 94 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 85 9.0E-14 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Acife_0571 0811d597f33f41d3604c3772165a9bdc 94 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 85 4.6E-21 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Acife_0571 0811d597f33f41d3604c3772165a9bdc 94 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 87 5.4E-23 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 Acife_3070 901ecd4d453ad678aae9c6e7f8aa2750 421 Pfam PF13730 Helix-turn-helix domain 67 119 3.5E-10 T 12-10-2018 Acife_3070 901ecd4d453ad678aae9c6e7f8aa2750 421 SUPERFAMILY SSF46785 91 129 1.25E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_3070 901ecd4d453ad678aae9c6e7f8aa2750 421 Gene3D G3DSA:1.10.10.10 66 145 6.1E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2261 5b8c55548c41bd7866eef10ca1aaf329 328 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 15 292 2.3E-17 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Acife_2261 5b8c55548c41bd7866eef10ca1aaf329 328 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 15 304 5.7E-44 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Acife_1666 fe68b7eeb431c97ede42984ce90e361f 380 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 366 9.1E-87 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Acife_1666 fe68b7eeb431c97ede42984ce90e361f 380 Gene3D G3DSA:3.40.640.10 2 245 9.5E-67 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1666 fe68b7eeb431c97ede42984ce90e361f 380 SUPERFAMILY SSF53383 6 369 1.58E-82 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_1666 fe68b7eeb431c97ede42984ce90e361f 380 Gene3D G3DSA:3.90.1150.10 246 372 5.2E-24 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1666 fe68b7eeb431c97ede42984ce90e361f 380 PIRSF PIRSF000390 1 373 2.5E-84 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Acife_2371 2bb1b76477aafea71843259b1a3ca84d 607 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 463 469 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Acife_2371 2bb1b76477aafea71843259b1a3ca84d 607 Pfam PF07669 Eco57I restriction-modification methylase 461 547 1.1E-6 T 12-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 Acife_2371 2bb1b76477aafea71843259b1a3ca84d 607 SUPERFAMILY SSF53335 52 585 4.88E-60 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2371 2bb1b76477aafea71843259b1a3ca84d 607 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 290 304 4.1E-10 T 12-10-2018 Acife_2371 2bb1b76477aafea71843259b1a3ca84d 607 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 493 517 4.1E-10 T 12-10-2018 Acife_2371 2bb1b76477aafea71843259b1a3ca84d 607 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 232 248 4.1E-10 T 12-10-2018 Acife_2371 2bb1b76477aafea71843259b1a3ca84d 607 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 460 472 4.1E-10 T 12-10-2018 Acife_1664 0246a19c4e5b51223badc9bac4c0702c 69 Gene3D G3DSA:2.40.50.240 1 67 2.0E-31 T 12-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily Acife_1664 0246a19c4e5b51223badc9bac4c0702c 69 Pfam PF06988 NifT/FixU protein 1 64 1.9E-31 T 12-10-2018 IPR009727 NifT/FixU GO:0009399 Acife_1664 0246a19c4e5b51223badc9bac4c0702c 69 SUPERFAMILY SSF159203 1 67 3.14E-26 T 12-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily Acife_1664 0246a19c4e5b51223badc9bac4c0702c 69 TIGRFAM TIGR02934 nifT_nitrog: probable nitrogen fixation protein FixT 1 67 4.0E-35 T 12-10-2018 IPR009727 NifT/FixU GO:0009399 Acife_0768 6aae7b0871a6d9e435acc70db13ba853 292 Gene3D G3DSA:3.20.20.150 19 292 2.2E-91 T 12-10-2018 Acife_0768 6aae7b0871a6d9e435acc70db13ba853 292 Pfam PF05114 Protein of unknown function (DUF692) 22 287 3.9E-103 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 Acife_1160 7f965ca75ee582cfc52d747bf304c724 141 Gene3D G3DSA:3.40.50.1010 1 130 2.9E-15 T 12-10-2018 Acife_1160 7f965ca75ee582cfc52d747bf304c724 141 Pfam PF01850 PIN domain 4 125 3.3E-9 T 12-10-2018 IPR002716 PIN domain Acife_1160 7f965ca75ee582cfc52d747bf304c724 141 SUPERFAMILY SSF88723 3 137 3.07E-14 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_0460 19fbfe4c6f4a94d287bfd1155b53e27a 354 Pfam PF01548 Transposase 14 154 4.7E-18 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Acife_0460 19fbfe4c6f4a94d287bfd1155b53e27a 354 Pfam PF02371 Transposase IS116/IS110/IS902 family 220 297 3.7E-26 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Acife_1526 3c96243eef910feb5a14f642f8e1584e 326 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 89 155 7.6E-7 T 12-10-2018 IPR018720 Domain of unknown function DUF2249 Acife_1526 3c96243eef910feb5a14f642f8e1584e 326 Pfam PF01814 Hemerythrin HHE cation binding domain 165 284 1.4E-6 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Acife_1526 3c96243eef910feb5a14f642f8e1584e 326 Gene3D G3DSA:1.20.120.520 152 296 4.9E-7 T 12-10-2018 Acife_1624 3ecbe05870e72f49a7d8f2d7b2732ff5 307 Gene3D G3DSA:3.40.190.10 110 264 2.1E-50 T 12-10-2018 Acife_1624 3ecbe05870e72f49a7d8f2d7b2732ff5 307 Gene3D G3DSA:3.40.190.10 30 293 2.1E-50 T 12-10-2018 Acife_1624 3ecbe05870e72f49a7d8f2d7b2732ff5 307 SUPERFAMILY SSF53850 28 301 1.18E-42 T 12-10-2018 Acife_1624 3ecbe05870e72f49a7d8f2d7b2732ff5 307 Pfam PF13531 Bacterial extracellular solute-binding protein 30 298 7.1E-48 T 12-10-2018 Acife_3269 75b10a95cf43dca30d4d76668a3f4cfe 206 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 15 195 2.0E-60 T 12-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Acife_3269 75b10a95cf43dca30d4d76668a3f4cfe 206 SUPERFAMILY SSF50022 36 192 1.6E-31 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_3269 75b10a95cf43dca30d4d76668a3f4cfe 206 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 9 45 1.3E-5 T 12-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Acife_3269 75b10a95cf43dca30d4d76668a3f4cfe 206 Pfam PF00355 Rieske [2Fe-2S] domain 121 182 5.3E-8 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Acife_3269 75b10a95cf43dca30d4d76668a3f4cfe 206 Gene3D G3DSA:2.102.10.10 47 195 1.6E-40 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_3269 75b10a95cf43dca30d4d76668a3f4cfe 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 5.7E-6 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Acife_3269 75b10a95cf43dca30d4d76668a3f4cfe 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 155 167 5.7E-6 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Acife_3269 75b10a95cf43dca30d4d76668a3f4cfe 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 168 180 5.7E-6 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Acife_2948 6c3842f93470f1abdb67fcbac1a16d9c 264 Pfam PF13401 AAA domain 39 168 7.3E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2948 6c3842f93470f1abdb67fcbac1a16d9c 264 SUPERFAMILY SSF52540 29 262 2.91E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2948 6c3842f93470f1abdb67fcbac1a16d9c 264 Gene3D G3DSA:3.40.50.300 24 182 5.1E-9 T 12-10-2018 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 SMART SM00928 329 374 2.7E-25 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 Gene3D G3DSA:3.40.50.11540 53 230 3.1E-82 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 SUPERFAMILY SSF142984 241 324 7.72E-23 T 12-10-2018 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 Gene3D G3DSA:1.20.1440.230 327 424 5.0E-32 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 48 219 1.3E-49 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 Gene3D G3DSA:3.10.20.600 232 326 9.1E-32 T 12-10-2018 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 342 353 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 SUPERFAMILY SSF142019 5 240 1.19E-87 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 Pfam PF10531 SLBB domain 243 289 8.9E-15 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 332 414 2.7E-28 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 SUPERFAMILY SSF140490 325 423 1.05E-35 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2549 ef93134fb31c25ac8738fbfb049556af 427 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 14 415 2.2E-195 T 12-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1434 c89ea7de043c739f28a9936699669890 205 SUPERFAMILY SSF46609 10 84 7.07E-12 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Acife_1434 c89ea7de043c739f28a9936699669890 205 Gene3D G3DSA:1.10.287.990 23 83 7.2E-5 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Acife_1434 c89ea7de043c739f28a9936699669890 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 192 1.3E-16 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Acife_1434 c89ea7de043c739f28a9936699669890 205 Gene3D G3DSA:2.40.500.20 85 203 1.1E-23 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Acife_1434 c89ea7de043c739f28a9936699669890 205 SUPERFAMILY SSF54719 92 198 6.42E-24 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Acife_1124 ea095ff8c7b38d401af75f03c850e214 380 Pfam PF07143 CrtC N-terminal lipocalin domain 70 239 2.8E-53 T 12-10-2018 IPR010791 AttH domain Acife_1124 ea095ff8c7b38d401af75f03c850e214 380 Gene3D G3DSA:2.40.370.10 245 377 3.5E-44 T 12-10-2018 IPR023374 AttH-like domain superfamily Acife_1124 ea095ff8c7b38d401af75f03c850e214 380 SUPERFAMILY SSF159245 50 372 5.1E-107 T 12-10-2018 Acife_1124 ea095ff8c7b38d401af75f03c850e214 380 Gene3D G3DSA:2.40.370.10 58 243 1.5E-64 T 12-10-2018 IPR023374 AttH-like domain superfamily Acife_1124 ea095ff8c7b38d401af75f03c850e214 380 Pfam PF17186 Lipocalin-like domain 244 372 1.5E-38 T 12-10-2018 Acife_1078 87bacac1745e06b2d0b803059542438f 30 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 9.1E-8 T 12-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 Acife_1078 87bacac1745e06b2d0b803059542438f 30 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 2.9E-5 T 12-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 Acife_1977 7e70f270df417b13a7b2cf3ef92498e1 149 SUPERFAMILY SSF81901 63 136 1.44E-9 T 12-10-2018 Acife_1977 7e70f270df417b13a7b2cf3ef92498e1 149 Gene3D G3DSA:1.25.40.10 54 149 5.4E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_3091 b8f430e1deb3fa924c06db93c016160f 388 SUPERFAMILY SSF160996 184 334 9.55E-39 T 12-10-2018 Acife_3091 b8f430e1deb3fa924c06db93c016160f 388 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 1 386 6.4E-125 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Acife_3091 b8f430e1deb3fa924c06db93c016160f 388 Gene3D G3DSA:3.50.50.60 3 381 8.0E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3091 b8f430e1deb3fa924c06db93c016160f 388 Gene3D G3DSA:2.40.30.10 183 333 8.0E-123 T 12-10-2018 Acife_3091 b8f430e1deb3fa924c06db93c016160f 388 Pfam PF03486 HI0933-like protein 1 386 5.0E-143 T 12-10-2018 Acife_3091 b8f430e1deb3fa924c06db93c016160f 388 Gene3D G3DSA:1.10.8.260 257 316 8.0E-123 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily Acife_3091 b8f430e1deb3fa924c06db93c016160f 388 SUPERFAMILY SSF51905 1 387 2.6E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3091 b8f430e1deb3fa924c06db93c016160f 388 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 5.9E-7 T 12-10-2018 Acife_3091 b8f430e1deb3fa924c06db93c016160f 388 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 1 19 5.9E-7 T 12-10-2018 Acife_3091 b8f430e1deb3fa924c06db93c016160f 388 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 341 363 5.9E-7 T 12-10-2018 Acife_2422 3bd01f09b663fd30fa2b47243463942b 490 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 2.0E-160 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Acife_2422 3bd01f09b663fd30fa2b47243463942b 490 Gene3D G3DSA:1.20.5.570 455 487 2.3E-8 T 12-10-2018 Acife_2422 3bd01f09b663fd30fa2b47243463942b 490 SUPERFAMILY SSF143968 323 483 3.66E-63 T 12-10-2018 Acife_2422 3bd01f09b663fd30fa2b47243463942b 490 SUPERFAMILY SSF50475 3 322 7.85E-114 T 12-10-2018 Acife_2422 3bd01f09b663fd30fa2b47243463942b 490 Gene3D G3DSA:3.40.1670.10 337 454 3.5E-48 T 12-10-2018 Acife_2422 3bd01f09b663fd30fa2b47243463942b 490 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 1.4E-157 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Acife_0665 245ebedc65d7e379648f8f79978b7bff 787 Gene3D G3DSA:2.170.130.10 76 200 1.2E-11 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Acife_0665 245ebedc65d7e379648f8f79978b7bff 787 Pfam PF00593 TonB dependent receptor 313 764 3.2E-26 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Acife_0665 245ebedc65d7e379648f8f79978b7bff 787 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 190 5.6E-9 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain Acife_0665 245ebedc65d7e379648f8f79978b7bff 787 SUPERFAMILY SSF56935 78 786 6.59E-60 T 12-10-2018 Acife_0665 245ebedc65d7e379648f8f79978b7bff 787 Gene3D G3DSA:2.40.170.20 212 786 9.8E-54 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Acife_1619 0545db1250499feb395c21932edb2065 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.5E-6 T 12-10-2018 Acife_1619 0545db1250499feb395c21932edb2065 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 1.5E-6 T 12-10-2018 Acife_1619 0545db1250499feb395c21932edb2065 432 Pfam PF01494 FAD binding domain 5 191 4.1E-7 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 Acife_1619 0545db1250499feb395c21932edb2065 432 SUPERFAMILY SSF54373 181 284 2.86E-22 T 12-10-2018 Acife_1619 0545db1250499feb395c21932edb2065 432 SUPERFAMILY SSF51905 1 373 4.41E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1619 0545db1250499feb395c21932edb2065 432 Gene3D G3DSA:3.50.50.60 5 364 1.1E-64 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1619 0545db1250499feb395c21932edb2065 432 Gene3D G3DSA:3.30.9.90 69 398 1.1E-64 T 12-10-2018 Acife_2908 f5e970d2b91d0ae00a639d838eefa122 310 Gene3D G3DSA:3.10.580.10 182 307 3.6E-42 T 12-10-2018 Acife_2908 f5e970d2b91d0ae00a639d838eefa122 310 Pfam PF00571 CBS domain 187 243 1.6E-6 T 12-10-2018 IPR000644 CBS domain Acife_2908 f5e970d2b91d0ae00a639d838eefa122 310 Pfam PF00571 CBS domain 258 307 4.8E-6 T 12-10-2018 IPR000644 CBS domain Acife_2908 f5e970d2b91d0ae00a639d838eefa122 310 SMART SM00116 196 244 0.021 T 12-10-2018 IPR000644 CBS domain Acife_2908 f5e970d2b91d0ae00a639d838eefa122 310 SMART SM00116 261 309 0.048 T 12-10-2018 IPR000644 CBS domain Acife_2908 f5e970d2b91d0ae00a639d838eefa122 310 SUPERFAMILY SSF53697 3 308 4.67E-63 T 12-10-2018 Acife_2908 f5e970d2b91d0ae00a639d838eefa122 310 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 31 300 4.0E-104 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Acife_2908 f5e970d2b91d0ae00a639d838eefa122 310 Gene3D G3DSA:3.40.50.10490 1 181 3.7E-59 T 12-10-2018 Acife_2908 f5e970d2b91d0ae00a639d838eefa122 310 PIRSF PIRSF004692 1 310 2.2E-128 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Acife_2908 f5e970d2b91d0ae00a639d838eefa122 310 Pfam PF01380 SIS domain 27 157 1.4E-27 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Acife_1729 171659912d13f06dfcbf151400de5cbb 83 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 82 1.4E-8 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Acife_1729 171659912d13f06dfcbf151400de5cbb 83 SUPERFAMILY SSF50475 2 79 6.29E-11 T 12-10-2018 Acife_1729 171659912d13f06dfcbf151400de5cbb 83 Gene3D G3DSA:2.30.110.10 3 83 2.5E-16 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Acife_2653 635585b4514404f43ca310e2af846299 347 Gene3D G3DSA:2.40.440.10 21 303 2.6E-88 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Acife_2653 635585b4514404f43ca310e2af846299 347 Pfam PF03734 L,D-transpeptidase catalytic domain 98 228 1.5E-18 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Acife_2653 635585b4514404f43ca310e2af846299 347 SUPERFAMILY SSF141523 96 229 3.53E-27 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Acife_2631 79857deb336d3240aa58204e6f6c7c89 147 Gene3D G3DSA:3.30.300.20 3 132 5.9E-7 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Acife_2631 79857deb336d3240aa58204e6f6c7c89 147 SUPERFAMILY SSF82784 34 129 1.57E-9 T 12-10-2018 IPR036102 OsmC/Ohr superfamily Acife_2532 423dd24883b4d6de4cc9ec1fc1b5c9bf 150 SMART SM00422 28 98 2.4E-4 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2532 423dd24883b4d6de4cc9ec1fc1b5c9bf 150 Pfam PF13411 MerR HTH family regulatory protein 28 97 1.9E-20 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2532 423dd24883b4d6de4cc9ec1fc1b5c9bf 150 SUPERFAMILY SSF46955 28 146 8.79E-16 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Acife_2532 423dd24883b4d6de4cc9ec1fc1b5c9bf 150 Gene3D G3DSA:1.10.1660.10 22 97 1.6E-18 T 12-10-2018 Acife_2576 6eabcce61a89ed483fa6add770b559ba 320 Gene3D G3DSA:3.40.50.300 7 202 9.6E-19 T 12-10-2018 Acife_2576 6eabcce61a89ed483fa6add770b559ba 320 SUPERFAMILY SSF52540 31 284 2.1E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2576 6eabcce61a89ed483fa6add770b559ba 320 Pfam PF05621 Bacterial TniB protein 16 275 2.7E-29 T 12-10-2018 IPR008868 Bacterial TniB Acife_2576 6eabcce61a89ed483fa6add770b559ba 320 SMART SM00382 42 205 3.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0498 c6969d08f5bf4a3964d32cdb7349020c 436 SUPERFAMILY SSF56954 29 429 1.83E-64 T 12-10-2018 Acife_0498 c6969d08f5bf4a3964d32cdb7349020c 436 Gene3D G3DSA:1.20.1600.10 41 433 4.9E-58 T 12-10-2018 Acife_0498 c6969d08f5bf4a3964d32cdb7349020c 436 Pfam PF02321 Outer membrane efflux protein 257 429 4.9E-28 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_0498 c6969d08f5bf4a3964d32cdb7349020c 436 Pfam PF02321 Outer membrane efflux protein 48 230 4.0E-10 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_1606 28f52d6081372fba5eafb422196b1a5e 171 Gene3D G3DSA:2.60.15.10 1 133 2.0E-28 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_1606 28f52d6081372fba5eafb422196b1a5e 171 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 6 135 4.7E-28 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_1606 28f52d6081372fba5eafb422196b1a5e 171 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 85 1.8E-22 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_1606 28f52d6081372fba5eafb422196b1a5e 171 SUPERFAMILY SSF51344 6 85 1.15E-18 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_1606 28f52d6081372fba5eafb422196b1a5e 171 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 5 134 18.811 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_1606 28f52d6081372fba5eafb422196b1a5e 171 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 18 92 1.0E-17 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_1342 f024c407bf08076758b743ae9fc993a2 325 Gene3D G3DSA:1.20.1510.10 38 230 6.8E-40 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Acife_1342 f024c407bf08076758b743ae9fc993a2 325 SUPERFAMILY SSF160240 238 309 3.14E-7 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Acife_1342 f024c407bf08076758b743ae9fc993a2 325 SUPERFAMILY SSF161111 38 230 4.45E-50 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Acife_1342 f024c407bf08076758b743ae9fc993a2 325 Pfam PF01545 Cation efflux family 43 228 3.5E-41 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Acife_1342 f024c407bf08076758b743ae9fc993a2 325 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 39 310 2.5E-74 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Acife_1785 7253f184855c3ba96acb61fbd1e5d1e9 476 Gene3D G3DSA:3.90.1150.10 328 461 7.0E-43 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1785 7253f184855c3ba96acb61fbd1e5d1e9 476 Gene3D G3DSA:3.40.640.10 71 311 1.6E-54 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1785 7253f184855c3ba96acb61fbd1e5d1e9 476 Pfam PF02347 Glycine cleavage system P-protein 19 282 3.0E-10 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Acife_1785 7253f184855c3ba96acb61fbd1e5d1e9 476 SUPERFAMILY SSF53383 14 470 1.16E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_0529 f8b014b65e0cc544c76b2b82b9a3b9af 388 SUPERFAMILY SSF55073 235 386 1.57E-38 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_0529 f8b014b65e0cc544c76b2b82b9a3b9af 388 Pfam PF00990 Diguanylate cyclase, GGDEF domain 231 383 1.1E-41 T 12-10-2018 IPR000160 GGDEF domain Acife_0529 f8b014b65e0cc544c76b2b82b9a3b9af 388 SMART SM00267 219 388 3.1E-50 T 12-10-2018 IPR000160 GGDEF domain Acife_0529 f8b014b65e0cc544c76b2b82b9a3b9af 388 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 228 386 1.7E-42 T 12-10-2018 IPR000160 GGDEF domain Acife_0529 f8b014b65e0cc544c76b2b82b9a3b9af 388 Gene3D G3DSA:3.30.70.270 218 387 2.9E-47 T 12-10-2018 Acife_0549 32ab5d5f166a878622d474a675a02beb 365 Gene3D G3DSA:3.30.70.1660 116 347 8.0E-94 T 12-10-2018 Acife_0549 32ab5d5f166a878622d474a675a02beb 365 Gene3D G3DSA:1.20.58.410 5 99 3.8E-6 T 12-10-2018 Acife_0549 32ab5d5f166a878622d474a675a02beb 365 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 8 361 2.3E-154 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Acife_0549 32ab5d5f166a878622d474a675a02beb 365 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 233 249 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Acife_0549 32ab5d5f166a878622d474a675a02beb 365 SMART SM00937 68 183 1.6E-56 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 Acife_0549 32ab5d5f166a878622d474a675a02beb 365 SUPERFAMILY SSF75620 15 358 1.1E-131 T 12-10-2018 Acife_0549 32ab5d5f166a878622d474a675a02beb 365 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 7 362 39.685 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Acife_0549 32ab5d5f166a878622d474a675a02beb 365 Pfam PF00472 RF-1 domain 219 326 1.1E-41 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Acife_0549 32ab5d5f166a878622d474a675a02beb 365 Gene3D G3DSA:3.30.160.20 215 297 8.0E-94 T 12-10-2018 Acife_0549 32ab5d5f166a878622d474a675a02beb 365 Pfam PF03462 PCRF domain 17 208 1.4E-67 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 Acife_2711 a9d6d93b00db5faec74bdcea6e864d97 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.0E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2711 a9d6d93b00db5faec74bdcea6e864d97 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.0E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2711 a9d6d93b00db5faec74bdcea6e864d97 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.0E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2711 a9d6d93b00db5faec74bdcea6e864d97 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.947 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2711 a9d6d93b00db5faec74bdcea6e864d97 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 5 101 1.6E-44 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2711 a9d6d93b00db5faec74bdcea6e864d97 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.9E-36 T 12-10-2018 IPR027486 Ribosomal protein S10 domain Acife_2711 a9d6d93b00db5faec74bdcea6e864d97 102 Gene3D G3DSA:3.30.70.600 1 102 6.3E-38 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Acife_2711 a9d6d93b00db5faec74bdcea6e864d97 102 SUPERFAMILY SSF54999 5 102 1.57E-38 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Acife_2711 a9d6d93b00db5faec74bdcea6e864d97 102 SMART SM01403 7 101 1.6E-56 T 12-10-2018 IPR027486 Ribosomal protein S10 domain Acife_2711 a9d6d93b00db5faec74bdcea6e864d97 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_3230 7bca30f45156d2953d994598beea35d4 314 SUPERFAMILY SSF51735 1 306 8.61E-86 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_3230 7bca30f45156d2953d994598beea35d4 314 Gene3D G3DSA:3.40.50.720 4 237 3.8E-84 T 12-10-2018 Acife_3230 7bca30f45156d2953d994598beea35d4 314 Gene3D G3DSA:3.90.25.10 174 300 3.8E-84 T 12-10-2018 Acife_3230 7bca30f45156d2953d994598beea35d4 314 PRINTS PR01713 Nucleotide sugar epimerase signature 270 287 8.4E-5 T 12-10-2018 Acife_3230 7bca30f45156d2953d994598beea35d4 314 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 8.4E-5 T 12-10-2018 Acife_3230 7bca30f45156d2953d994598beea35d4 314 PRINTS PR01713 Nucleotide sugar epimerase signature 209 224 8.4E-5 T 12-10-2018 Acife_3230 7bca30f45156d2953d994598beea35d4 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 237 7.2E-48 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 384 621 3.7E-121 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 Pfam PF04539 Sigma-70 region 3 467 543 5.5E-31 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 582 608 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 PRINTS PR00046 Major sigma-70 factor signature 582 597 7.1E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 PRINTS PR00046 Major sigma-70 factor signature 561 573 7.1E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 PRINTS PR00046 Major sigma-70 factor signature 412 425 7.1E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 PRINTS PR00046 Major sigma-70 factor signature 436 444 7.1E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 PRINTS PR00046 Major sigma-70 factor signature 597 608 7.1E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 Pfam PF00140 Sigma-70 factor, region 1.2 107 138 8.1E-14 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 Pfam PF03979 Sigma-70 factor, region 1.1 12 92 1.6E-28 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 SUPERFAMILY SSF88659 518 621 3.71E-25 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Acife_2382 c2303058895620e75bb8585d2167f6e9 629 Gene3D G3DSA:1.10.10.10 461 536 1.3E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2382 c2303058895620e75bb8585d2167f6e9 629 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 384 610 3.2E-38 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 2 622 43.784 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 Gene3D G3DSA:1.10.601.10 122 457 6.4E-122 T 12-10-2018 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 Pfam PF04546 Sigma-70, non-essential region 148 357 9.3E-53 T 12-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 412 425 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 SUPERFAMILY SSF88946 124 455 1.7E-95 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 Pfam PF04542 Sigma-70 region 2 388 457 1.8E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 Gene3D G3DSA:1.10.220.120 9 72 4.7E-28 T 12-10-2018 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 SUPERFAMILY SSF88659 461 534 8.07E-22 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Acife_2382 c2303058895620e75bb8585d2167f6e9 629 Pfam PF04545 Sigma-70, region 4 560 610 1.1E-17 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Acife_2382 c2303058895620e75bb8585d2167f6e9 629 Gene3D G3DSA:1.10.10.10 537 623 3.8E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_3188 85540647fa68ffa5b4ac937aa893ab4e 455 Pfam PF12804 MobA-like NTP transferase domain 6 123 5.6E-24 T 12-10-2018 IPR025877 MobA-like NTP transferase Acife_3188 85540647fa68ffa5b4ac937aa893ab4e 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 2.6E-176 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Acife_3188 85540647fa68ffa5b4ac937aa893ab4e 455 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 401 429 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Acife_3188 85540647fa68ffa5b4ac937aa893ab4e 455 Gene3D G3DSA:3.90.550.10 3 225 1.6E-55 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3188 85540647fa68ffa5b4ac937aa893ab4e 455 SUPERFAMILY SSF53448 5 244 1.54E-54 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3188 85540647fa68ffa5b4ac937aa893ab4e 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 295 5.3E-4 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_3188 85540647fa68ffa5b4ac937aa893ab4e 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 393 427 6.5E-10 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_3188 85540647fa68ffa5b4ac937aa893ab4e 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 316 349 4.9E-6 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_3188 85540647fa68ffa5b4ac937aa893ab4e 455 Gene3D G3DSA:2.160.10.10 227 454 4.5E-70 T 12-10-2018 Acife_3188 85540647fa68ffa5b4ac937aa893ab4e 455 SUPERFAMILY SSF51161 252 434 5.15E-53 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Acife_3188 85540647fa68ffa5b4ac937aa893ab4e 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 450 39.325 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 Gene3D G3DSA:3.40.50.720 2 253 4.4E-89 T 12-10-2018 Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.4E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.4E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.4E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.4E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.4E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 251 2.8E-69 T 12-10-2018 Acife_3156 500e1b9fe77c964324cd26533da96ad1 261 SUPERFAMILY SSF51735 7 253 1.59E-89 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2551 b68174f47ab6f0a5e83435e7a78a5f2f 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 12-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2551 b68174f47ab6f0a5e83435e7a78a5f2f 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 2.1E-184 T 12-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2551 b68174f47ab6f0a5e83435e7a78a5f2f 417 Gene3D G3DSA:1.10.645.20 4 417 2.3E-175 T 12-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2551 b68174f47ab6f0a5e83435e7a78a5f2f 417 SUPERFAMILY SSF56762 16 417 2.09E-138 T 12-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2551 b68174f47ab6f0a5e83435e7a78a5f2f 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 7.3E-124 T 12-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2551 b68174f47ab6f0a5e83435e7a78a5f2f 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 49.982 T 12-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_0374 884f5e86d78ea964271f7940128de88e 91 SUPERFAMILY SSF143011 4 90 7.85E-7 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_0374 884f5e86d78ea964271f7940128de88e 91 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 89 1.3E-16 T 12-10-2018 IPR007711 Toxin HigB-1 Acife_0374 884f5e86d78ea964271f7940128de88e 91 Gene3D G3DSA:3.30.2310.20 1 91 2.9E-27 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_1008 3a31ee2f87f098ecf65ad7785d11255e 266 Pfam PF08241 Methyltransferase domain 46 142 2.2E-24 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Acife_1008 3a31ee2f87f098ecf65ad7785d11255e 266 Gene3D G3DSA:3.40.50.150 22 250 4.8E-58 T 12-10-2018 Acife_1008 3a31ee2f87f098ecf65ad7785d11255e 266 SUPERFAMILY SSF53335 30 210 3.04E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_3222 a941d13730f9d158c9856814c42c4e4a 396 Pfam PF03050 Transposase IS66 family 175 344 2.1E-58 T 12-10-2018 IPR004291 Transposase, IS66 Acife_3222 a941d13730f9d158c9856814c42c4e4a 396 Pfam PF05717 IS66 Orf2 like protein 115 176 4.1E-24 T 12-10-2018 IPR008878 Transposase IS66, Orf2 Acife_3222 a941d13730f9d158c9856814c42c4e4a 396 Pfam PF13817 IS66 C-terminal element 351 388 3.3E-19 T 12-10-2018 IPR039552 Transposase IS66, C-terminal Acife_1097 53cfcc1f62521eaaa512933d736dd165 264 PIRSF PIRSF000441 14 240 2.7E-87 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Acife_1097 53cfcc1f62521eaaa512933d736dd165 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 86 123 1.2E-5 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_1097 53cfcc1f62521eaaa512933d736dd165 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 165 3.2E-7 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_1097 53cfcc1f62521eaaa512933d736dd165 264 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 22 181 4.0E-76 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Acife_1097 53cfcc1f62521eaaa512933d736dd165 264 Gene3D G3DSA:1.10.3130.10 16 81 6.5E-22 T 12-10-2018 Acife_1097 53cfcc1f62521eaaa512933d736dd165 264 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 141 169 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Acife_1097 53cfcc1f62521eaaa512933d736dd165 264 SUPERFAMILY SSF51161 17 185 2.77E-55 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Acife_1097 53cfcc1f62521eaaa512933d736dd165 264 Gene3D G3DSA:2.160.10.10 82 198 4.0E-37 T 12-10-2018 Acife_1097 53cfcc1f62521eaaa512933d736dd165 264 Pfam PF06426 Serine acetyltransferase, N-terminal 19 50 3.2E-4 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Acife_2698 b43984b555f23ec5501ddd59c6a83ba1 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 42.771 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2698 b43984b555f23ec5501ddd59c6a83ba1 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 2.9E-38 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2698 b43984b555f23ec5501ddd59c6a83ba1 180 PIRSF PIRSF002161 1 180 3.3E-60 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2698 b43984b555f23ec5501ddd59c6a83ba1 180 Gene3D G3DSA:3.30.1440.10 1 180 1.1E-74 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2698 b43984b555f23ec5501ddd59c6a83ba1 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2698 b43984b555f23ec5501ddd59c6a83ba1 180 Pfam PF00281 Ribosomal protein L5 25 81 2.2E-27 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2698 b43984b555f23ec5501ddd59c6a83ba1 180 SUPERFAMILY SSF55282 4 179 9.18E-74 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2597 35ff1abcc2c2259ae2c1716b86cfd9b1 323 Pfam PF06481 COX Aromatic Rich Motif 251 297 3.1E-10 T 12-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 Acife_2597 35ff1abcc2c2259ae2c1716b86cfd9b1 323 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 160 232 9.4E-7 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2597 35ff1abcc2c2259ae2c1716b86cfd9b1 323 Gene3D G3DSA:2.60.40.420 122 295 8.2E-44 T 12-10-2018 IPR008972 Cupredoxin Acife_2597 35ff1abcc2c2259ae2c1716b86cfd9b1 323 SUPERFAMILY SSF81464 33 111 2.45E-13 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2597 35ff1abcc2c2259ae2c1716b86cfd9b1 323 SUPERFAMILY SSF49503 134 292 7.97E-39 T 12-10-2018 IPR008972 Cupredoxin Acife_2597 35ff1abcc2c2259ae2c1716b86cfd9b1 323 Gene3D G3DSA:1.10.287.90 34 116 3.6E-19 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0615 394de327e068e24ae31b411592d9fc2c 206 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 34 4.5E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Acife_0615 394de327e068e24ae31b411592d9fc2c 206 Gene3D G3DSA:1.20.5.510 6 46 3.3E-7 T 12-10-2018 Acife_0615 394de327e068e24ae31b411592d9fc2c 206 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 8 45 1.5E-14 T 12-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Acife_0615 394de327e068e24ae31b411592d9fc2c 206 Gene3D G3DSA:2.102.10.10 47 193 1.6E-41 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_0615 394de327e068e24ae31b411592d9fc2c 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 168 180 1.8E-5 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Acife_0615 394de327e068e24ae31b411592d9fc2c 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 155 167 1.8E-5 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Acife_0615 394de327e068e24ae31b411592d9fc2c 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 1.8E-5 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Acife_0615 394de327e068e24ae31b411592d9fc2c 206 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 15 193 3.4E-65 T 12-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Acife_0615 394de327e068e24ae31b411592d9fc2c 206 Pfam PF00355 Rieske [2Fe-2S] domain 116 182 2.2E-9 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Acife_0615 394de327e068e24ae31b411592d9fc2c 206 SUPERFAMILY SSF50022 37 188 2.79E-31 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_1817 44a1182dabcd839b9416f363ae38e41e 658 Gene3D G3DSA:1.10.530.10 486 651 3.0E-37 T 12-10-2018 Acife_1817 44a1182dabcd839b9416f363ae38e41e 658 SUPERFAMILY SSF53955 491 648 4.39E-34 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Acife_1817 44a1182dabcd839b9416f363ae38e41e 658 Pfam PF01464 Transglycosylase SLT domain 496 600 5.6E-20 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Acife_1817 44a1182dabcd839b9416f363ae38e41e 658 SUPERFAMILY SSF48435 42 478 1.96E-56 T 12-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 Acife_1817 44a1182dabcd839b9416f363ae38e41e 658 Gene3D G3DSA:1.25.20.10 39 398 2.1E-40 T 12-10-2018 Acife_0632 ce40e572ac22c9e565528fb46b40017d 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.8E-42 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0632 ce40e572ac22c9e565528fb46b40017d 112 Gene3D G3DSA:3.30.70.120 1 112 1.3E-46 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Acife_0632 ce40e572ac22c9e565528fb46b40017d 112 PRINTS PR00340 P-II protein signature 83 103 2.2E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0632 ce40e572ac22c9e565528fb46b40017d 112 PRINTS PR00340 P-II protein signature 2 17 2.2E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0632 ce40e572ac22c9e565528fb46b40017d 112 PRINTS PR00340 P-II protein signature 23 41 2.2E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0632 ce40e572ac22c9e565528fb46b40017d 112 PRINTS PR00340 P-II protein signature 52 75 2.2E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0632 ce40e572ac22c9e565528fb46b40017d 112 PIRSF PIRSF039144 1 112 8.3E-56 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0632 ce40e572ac22c9e565528fb46b40017d 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Acife_0632 ce40e572ac22c9e565528fb46b40017d 112 SUPERFAMILY SSF54913 1 112 2.83E-45 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Acife_0632 ce40e572ac22c9e565528fb46b40017d 112 SMART SM00938 4 105 2.9E-65 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0632 ce40e572ac22c9e565528fb46b40017d 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Acife_0772 770aa44a594ad8e5cc93113d50aa7e3d 94 Pfam PF10048 Predicted integral membrane protein (DUF2282) 41 89 7.3E-20 T 12-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane Acife_0003 627c72cf64d637f99329d1b8aea5e837 352 Gene3D G3DSA:3.40.50.300 6 323 5.6E-59 T 12-10-2018 Acife_0003 627c72cf64d637f99329d1b8aea5e837 352 Gene3D G3DSA:1.20.1050.90 114 289 5.6E-59 T 12-10-2018 Acife_0003 627c72cf64d637f99329d1b8aea5e837 352 Pfam PF13476 AAA domain 6 61 3.4E-6 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain Acife_0003 627c72cf64d637f99329d1b8aea5e837 352 SUPERFAMILY SSF52540 1 321 2.42E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0003 627c72cf64d637f99329d1b8aea5e837 352 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 352 59.265 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Acife_0003 627c72cf64d637f99329d1b8aea5e837 352 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 331 1.3E-63 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Acife_2002 ce52f5ac8718fe5c7ab827894520c93e 231 SUPERFAMILY SSF56784 12 220 5.89E-51 T 12-10-2018 IPR036412 HAD-like superfamily Acife_2002 ce52f5ac8718fe5c7ab827894520c93e 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 120 4.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_2002 ce52f5ac8718fe5c7ab827894520c93e 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 4.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_2002 ce52f5ac8718fe5c7ab827894520c93e 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 4.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_2002 ce52f5ac8718fe5c7ab827894520c93e 231 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 14 220 1.3E-52 T 12-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Acife_2002 ce52f5ac8718fe5c7ab827894520c93e 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 110 188 8.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_2002 ce52f5ac8718fe5c7ab827894520c93e 231 Gene3D G3DSA:3.40.50.1000 14 214 1.8E-50 T 12-10-2018 IPR023214 HAD superfamily Acife_2002 ce52f5ac8718fe5c7ab827894520c93e 231 Gene3D G3DSA:1.10.150.240 26 92 1.8E-50 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Acife_2002 ce52f5ac8718fe5c7ab827894520c93e 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 190 5.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Acife_2002 ce52f5ac8718fe5c7ab827894520c93e 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 193 1.5E-28 T 12-10-2018 Acife_0793 86f977518c3c15702c459b72f995d006 431 PIRSF PIRSF001400 1 426 8.8E-175 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 Pfam PF03952 Enolase, N-terminal domain 5 135 4.6E-58 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 SMART SM01192 140 427 3.3E-175 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 ProSitePatterns PS00164 Enolase signature. 336 349 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0793 86f977518c3c15702c459b72f995d006 431 Gene3D G3DSA:3.30.390.10 3 127 8.4E-55 T 12-10-2018 IPR029017 Enolase-like, N-terminal Acife_0793 86f977518c3c15702c459b72f995d006 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 5 426 2.1E-181 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 424 2.5E-109 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 SUPERFAMILY SSF54826 5 137 1.84E-53 T 12-10-2018 Acife_0793 86f977518c3c15702c459b72f995d006 431 Gene3D G3DSA:3.20.20.120 130 430 4.0E-117 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Acife_0793 86f977518c3c15702c459b72f995d006 431 PRINTS PR00148 Enolase signature 313 324 1.3E-41 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 PRINTS PR00148 Enolase signature 365 382 1.3E-41 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 PRINTS PR00148 Enolase signature 163 176 1.3E-41 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 PRINTS PR00148 Enolase signature 38 52 1.3E-41 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 PRINTS PR00148 Enolase signature 108 124 1.3E-41 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 PRINTS PR00148 Enolase signature 336 350 1.3E-41 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 Hamap MF_00318 Enolase [eno]. 3 413 41.894 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_0793 86f977518c3c15702c459b72f995d006 431 SUPERFAMILY SSF51604 140 426 1.7E-106 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Acife_0793 86f977518c3c15702c459b72f995d006 431 SMART SM01193 5 135 1.4E-87 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Acife_2128 89cfd191f1754da92e0046019785cd2d 345 Gene3D G3DSA:2.40.50.100 59 189 5.5E-55 T 12-10-2018 Acife_2128 89cfd191f1754da92e0046019785cd2d 345 Gene3D G3DSA:2.40.420.20 33 326 5.5E-55 T 12-10-2018 Acife_2128 89cfd191f1754da92e0046019785cd2d 345 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 250 1.1E-21 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_2128 89cfd191f1754da92e0046019785cd2d 345 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 341 2.6E-50 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Acife_2128 89cfd191f1754da92e0046019785cd2d 345 Gene3D G3DSA:2.40.30.170 45 268 5.5E-55 T 12-10-2018 Acife_2128 89cfd191f1754da92e0046019785cd2d 345 SUPERFAMILY SSF111369 66 268 2.48E-17 T 12-10-2018 Acife_2128 89cfd191f1754da92e0046019785cd2d 345 Gene3D G3DSA:1.10.287.470 93 157 5.5E-55 T 12-10-2018 Acife_2477 d22acd04680fdbe06ebfd73fe4ee84b7 156 SUPERFAMILY SSF75169 4 155 5.3E-20 T 12-10-2018 IPR027396 DsrEFH-like Acife_2477 d22acd04680fdbe06ebfd73fe4ee84b7 156 Gene3D G3DSA:3.40.1260.10 1 156 4.4E-42 T 12-10-2018 IPR027396 DsrEFH-like Acife_2477 d22acd04680fdbe06ebfd73fe4ee84b7 156 Pfam PF13686 DsrE/DsrF/DrsH-like family 3 155 3.7E-56 T 12-10-2018 IPR032836 DsrE2-like family Acife_0719 db4b7ebcf18e86c63b40244c5941ef37 755 SUPERFAMILY SSF52540 157 632 6.37E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0719 db4b7ebcf18e86c63b40244c5941ef37 755 Gene3D G3DSA:3.40.50.300 368 627 1.4E-42 T 12-10-2018 Acife_0719 db4b7ebcf18e86c63b40244c5941ef37 755 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 142 636 1.6E-101 T 12-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Acife_2381 1e40f91d31165a9c7999b5638483ebdb 350 Pfam PF00589 Phage integrase family 219 342 7.9E-20 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_2381 1e40f91d31165a9c7999b5638483ebdb 350 Gene3D G3DSA:1.10.443.10 171 350 8.6E-36 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_2381 1e40f91d31165a9c7999b5638483ebdb 350 Gene3D G3DSA:1.10.150.130 60 170 3.4E-9 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_2381 1e40f91d31165a9c7999b5638483ebdb 350 SUPERFAMILY SSF56349 65 345 4.41E-56 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_3277 b9a621147882d90a4f20942187f19ba8 509 SUPERFAMILY SSF55681 1 216 6.09E-30 T 12-10-2018 Acife_3277 b9a621147882d90a4f20942187f19ba8 509 Gene3D G3DSA:3.30.930.10 8 230 3.7E-25 T 12-10-2018 Acife_3277 b9a621147882d90a4f20942187f19ba8 509 Gene3D G3DSA:3.30.390.50 243 331 4.2E-6 T 12-10-2018 Acife_3277 b9a621147882d90a4f20942187f19ba8 509 Pfam PF01976 Protein of unknown function DUF116 366 472 3.9E-8 T 12-10-2018 IPR002829 Protein of unknown function DUF116 Acife_0233 e36e94a1d9dee5bc4fa50695aff54a26 415 Pfam PF07885 Ion channel 169 242 4.7E-15 T 12-10-2018 IPR013099 Potassium channel domain Acife_0233 e36e94a1d9dee5bc4fa50695aff54a26 415 SUPERFAMILY SSF51735 263 394 2.76E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0233 e36e94a1d9dee5bc4fa50695aff54a26 415 Gene3D G3DSA:1.10.287.70 143 253 1.3E-16 T 12-10-2018 Acife_0233 e36e94a1d9dee5bc4fa50695aff54a26 415 Pfam PF02254 TrkA-N domain 266 379 3.8E-14 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Acife_0233 e36e94a1d9dee5bc4fa50695aff54a26 415 Gene3D G3DSA:3.40.50.720 262 407 2.9E-23 T 12-10-2018 Acife_0233 e36e94a1d9dee5bc4fa50695aff54a26 415 SUPERFAMILY SSF81324 142 286 3.4E-21 T 12-10-2018 Acife_1641 dc9ff5958d28c1d60d0ed8d6121f9c7d 87 PIRSF PIRSF037676 10 85 2.4E-25 T 12-10-2018 IPR007774 Putative nitrogen fixation protein Acife_1641 dc9ff5958d28c1d60d0ed8d6121f9c7d 87 Pfam PF05082 Rop-like 24 83 2.4E-27 T 12-10-2018 IPR007774 Putative nitrogen fixation protein Acife_1641 dc9ff5958d28c1d60d0ed8d6121f9c7d 87 Gene3D G3DSA:1.10.287.660 21 85 9.6E-28 T 12-10-2018 IPR029012 Helix hairpin bin domain superfamily Acife_2156 ca2b335cda26895938c39d6862bbf9b9 143 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 14 138 4.0E-37 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 Acife_2156 ca2b335cda26895938c39d6862bbf9b9 143 PIRSF PIRSF004681 1 139 1.8E-43 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 Acife_2156 ca2b335cda26895938c39d6862bbf9b9 143 Pfam PF01894 Uncharacterised protein family UPF0047 20 135 1.4E-34 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 Acife_2156 ca2b335cda26895938c39d6862bbf9b9 143 Gene3D G3DSA:2.60.120.460 2 139 6.3E-37 T 12-10-2018 IPR035917 YjbQ-like superfamily Acife_2156 ca2b335cda26895938c39d6862bbf9b9 143 SUPERFAMILY SSF111038 5 138 1.26E-41 T 12-10-2018 IPR035917 YjbQ-like superfamily Acife_1272 7214f74c78059fe16cc170186514bef5 329 TIGRFAM TIGR03466 HpnA: hopanoid-associated sugar epimerase 1 329 1.2E-149 T 12-10-2018 IPR017829 Hopanoid-associated sugar epimerase KEGG: 00941+1.1.1.219|MetaCyc: PWY-5152 Acife_1272 7214f74c78059fe16cc170186514bef5 329 SUPERFAMILY SSF51735 1 327 3.8E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1272 7214f74c78059fe16cc170186514bef5 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 230 5.0E-31 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Acife_1272 7214f74c78059fe16cc170186514bef5 329 Gene3D G3DSA:3.40.50.720 1 329 1.7E-108 T 12-10-2018 Acife_2122 5746bce3554ab9f39c8708c496568404 181 Pfam PF01464 Transglycosylase SLT domain 72 161 2.8E-15 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Acife_2122 5746bce3554ab9f39c8708c496568404 181 Gene3D G3DSA:1.10.530.10 40 181 4.8E-27 T 12-10-2018 Acife_2122 5746bce3554ab9f39c8708c496568404 181 SUPERFAMILY SSF53955 45 179 1.69E-26 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Acife_2686 b084573c7b54b51292445700cefe65d7 118 Gene3D G3DSA:1.10.8.50 1 71 6.1E-29 T 12-10-2018 Acife_2686 b084573c7b54b51292445700cefe65d7 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2686 b084573c7b54b51292445700cefe65d7 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.349 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2686 b084573c7b54b51292445700cefe65d7 118 PIRSF PIRSF002134 1 118 1.6E-43 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2686 b084573c7b54b51292445700cefe65d7 118 SUPERFAMILY SSF46946 2 113 2.94E-46 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Acife_2686 b084573c7b54b51292445700cefe65d7 118 Gene3D G3DSA:4.10.910.10 72 118 8.2E-26 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2686 b084573c7b54b51292445700cefe65d7 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 8.8E-55 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2686 b084573c7b54b51292445700cefe65d7 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.1E-33 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2288 aa6ea59222528562cb06954b68b75f99 509 Pfam PF05670 Domain of unknown function (DUF814) 402 486 1.6E-17 T 12-10-2018 IPR008532 Domain of unknown function DUF814 Acife_2288 aa6ea59222528562cb06954b68b75f99 509 Gene3D G3DSA:2.30.310.10 1 157 1.0E-8 T 12-10-2018 Acife_2288 aa6ea59222528562cb06954b68b75f99 509 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 65 161 7.7E-8 T 12-10-2018 Acife_2288 aa6ea59222528562cb06954b68b75f99 509 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 251 360 1.7E-8 T 12-10-2018 Acife_1765 d9a71793b35b96cb78486f8bedbc510a 208 Pfam PF08281 Sigma-70, region 4 145 193 1.9E-19 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_1765 d9a71793b35b96cb78486f8bedbc510a 208 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 198 1.2E-32 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Acife_1765 d9a71793b35b96cb78486f8bedbc510a 208 Gene3D G3DSA:1.10.1740.10 13 134 9.2E-39 T 12-10-2018 Acife_1765 d9a71793b35b96cb78486f8bedbc510a 208 SUPERFAMILY SSF88659 136 199 2.8E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Acife_1765 d9a71793b35b96cb78486f8bedbc510a 208 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 18 203 1.4E-102 T 12-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_1765 d9a71793b35b96cb78486f8bedbc510a 208 Pfam PF04542 Sigma-70 region 2 38 105 6.3E-19 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Acife_1765 d9a71793b35b96cb78486f8bedbc510a 208 Gene3D G3DSA:1.10.10.10 135 204 1.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1765 d9a71793b35b96cb78486f8bedbc510a 208 SUPERFAMILY SSF88946 17 121 3.45E-30 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Acife_1765 d9a71793b35b96cb78486f8bedbc510a 208 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 60 91 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_2305 d233169f51d7dd1692a8e0bdb4e3c7c2 1319 Gene3D G3DSA:3.40.50.300 1021 1264 3.4E-35 T 12-10-2018 Acife_2305 d233169f51d7dd1692a8e0bdb4e3c7c2 1319 Gene3D G3DSA:3.40.50.300 749 1020 1.0E-20 T 12-10-2018 Acife_2305 d233169f51d7dd1692a8e0bdb4e3c7c2 1319 Pfam PF13087 AAA domain 999 1237 1.2E-32 T 12-10-2018 Acife_2305 d233169f51d7dd1692a8e0bdb4e3c7c2 1319 SUPERFAMILY SSF52540 379 1234 1.55E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2305 d233169f51d7dd1692a8e0bdb4e3c7c2 1319 Pfam PF13086 AAA domain 383 551 2.5E-17 T 12-10-2018 Acife_2305 d233169f51d7dd1692a8e0bdb4e3c7c2 1319 Pfam PF13086 AAA domain 785 948 1.1E-17 T 12-10-2018 Acife_3273 25a1c3833f25d62aabdfb29ef73096f7 393 Pfam PF03060 Nitronate monooxygenase 15 376 6.4E-34 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Acife_3273 25a1c3833f25d62aabdfb29ef73096f7 393 Gene3D G3DSA:3.20.20.70 12 388 4.7E-48 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_3273 25a1c3833f25d62aabdfb29ef73096f7 393 SUPERFAMILY SSF51412 14 306 3.21E-31 T 12-10-2018 Acife_1993 5166a2e1df64e19afd8a558ffe982193 225 Pfam PF02195 ParB-like nuclease domain 70 163 2.1E-11 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Acife_1993 5166a2e1df64e19afd8a558ffe982193 225 SUPERFAMILY SSF110849 67 196 7.32E-17 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Acife_1993 5166a2e1df64e19afd8a558ffe982193 225 SMART SM00470 68 164 0.0053 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Acife_0272 81d74236f9b4447d10890730d50db07c 571 SUPERFAMILY SSF52540 194 525 2.23E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0272 81d74236f9b4447d10890730d50db07c 571 SUPERFAMILY SSF49879 6 93 1.64E-11 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Acife_0272 81d74236f9b4447d10890730d50db07c 571 Pfam PF00437 Type II/IV secretion system protein 209 485 3.4E-84 T 12-10-2018 IPR001482 Type II/IV secretion system protein Acife_0272 81d74236f9b4447d10890730d50db07c 571 Gene3D G3DSA:3.40.50.300 306 545 5.1E-73 T 12-10-2018 Acife_0272 81d74236f9b4447d10890730d50db07c 571 Gene3D G3DSA:3.30.450.380 122 304 3.9E-36 T 12-10-2018 Acife_0272 81d74236f9b4447d10890730d50db07c 571 Gene3D G3DSA:2.60.200.20 1 96 3.0E-8 T 12-10-2018 Acife_1107 229dcd1d2b50f0cdc68c87e02c0aa2dd 299 Gene3D G3DSA:3.40.1090.10 1 110 6.8E-21 T 12-10-2018 Acife_1107 229dcd1d2b50f0cdc68c87e02c0aa2dd 299 Pfam PF01734 Patatin-like phospholipase 5 165 6.9E-21 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Acife_1107 229dcd1d2b50f0cdc68c87e02c0aa2dd 299 SUPERFAMILY SSF52151 2 290 4.45E-50 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Acife_2887 bb15622f85df809f48491ab36934f601 133 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 117 31.245 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Acife_2887 bb15622f85df809f48491ab36934f601 133 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 113 2.2E-46 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Acife_2887 bb15622f85df809f48491ab36934f601 133 SUPERFAMILY SSF56276 3 115 7.85E-43 T 12-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Acife_2887 bb15622f85df809f48491ab36934f601 133 Gene3D G3DSA:3.30.360.110 1 62 8.3E-25 T 12-10-2018 Acife_2887 bb15622f85df809f48491ab36934f601 133 Gene3D G3DSA:3.30.160.750 63 130 9.9E-28 T 12-10-2018 Acife_2887 bb15622f85df809f48491ab36934f601 133 Pfam PF02675 S-adenosylmethionine decarboxylase 8 113 1.1E-39 T 12-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 274 286 - T 12-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 SUPERFAMILY SSF56655 5 332 1.25E-111 T 12-10-2018 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 180 203 5.7E-69 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 5.7E-69 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 206 233 5.7E-69 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 149 172 5.7E-69 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 5.7E-69 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 308 333 5.7E-69 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 194 2.3E-60 T 12-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 334 45.613 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 Gene3D G3DSA:3.30.540.10 2 196 5.8E-67 T 12-10-2018 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 PIRSF PIRSF000904 1 335 3.8E-118 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 PIRSF PIRSF500210 1 335 1.2E-120 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Acife_2855 c2d79b980e5e5547e221cdc797445628 336 Gene3D G3DSA:3.40.190.80 197 334 4.2E-54 T 12-10-2018 Acife_0751 dfc0212e7ba07e06a598db1337da3f14 268 Gene3D G3DSA:1.10.3210.10 2 173 1.7E-59 T 12-10-2018 Acife_0751 dfc0212e7ba07e06a598db1337da3f14 268 SUPERFAMILY SSF109604 2 169 1.65E-40 T 12-10-2018 Acife_2133 212aa9d9e5f20efce58ca468cdd7c29a 787 Gene3D G3DSA:2.40.170.20 204 787 2.0E-48 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Acife_2133 212aa9d9e5f20efce58ca468cdd7c29a 787 Pfam PF00593 TonB dependent receptor 310 764 3.0E-31 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Acife_2133 212aa9d9e5f20efce58ca468cdd7c29a 787 SUPERFAMILY SSF56935 68 787 8.06E-60 T 12-10-2018 Acife_2133 212aa9d9e5f20efce58ca468cdd7c29a 787 Gene3D G3DSA:2.170.130.10 63 197 1.7E-5 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Acife_0545 a2a30eb3b1db1b199f81329a1c977ec9 281 Pfam PF08544 GHMP kinases C terminal 207 261 2.9E-6 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain Acife_0545 a2a30eb3b1db1b199f81329a1c977ec9 281 SUPERFAMILY SSF54211 5 155 2.96E-39 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_0545 a2a30eb3b1db1b199f81329a1c977ec9 281 Gene3D G3DSA:3.30.230.10 1 157 9.5E-53 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Acife_0545 a2a30eb3b1db1b199f81329a1c977ec9 281 Gene3D G3DSA:3.30.70.890 160 279 2.0E-29 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Acife_0545 a2a30eb3b1db1b199f81329a1c977ec9 281 Pfam PF00288 GHMP kinases N terminal domain 85 142 9.3E-10 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Acife_0545 a2a30eb3b1db1b199f81329a1c977ec9 281 PIRSF PIRSF010376 1 279 2.5E-83 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Acife_0545 a2a30eb3b1db1b199f81329a1c977ec9 281 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 276 2.1E-73 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Acife_0545 a2a30eb3b1db1b199f81329a1c977ec9 281 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 267 31.579 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Acife_0545 a2a30eb3b1db1b199f81329a1c977ec9 281 SUPERFAMILY SSF55060 160 277 3.6E-29 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Acife_2426 ff76856753b05f06d4d20aabf033b7ab 256 Gene3D G3DSA:3.20.20.140 1 253 1.4E-77 T 12-10-2018 Acife_2426 ff76856753b05f06d4d20aabf033b7ab 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Acife_2426 ff76856753b05f06d4d20aabf033b7ab 256 Pfam PF01026 TatD related DNase 5 251 6.5E-65 T 12-10-2018 IPR001130 TatD family GO:0016788 Acife_2426 ff76856753b05f06d4d20aabf033b7ab 256 SUPERFAMILY SSF51556 4 252 4.72E-76 T 12-10-2018 IPR032466 Metal-dependent hydrolase Acife_2426 ff76856753b05f06d4d20aabf033b7ab 256 PIRSF PIRSF005902 2 255 4.8E-65 T 12-10-2018 IPR001130 TatD family GO:0016788 Acife_1577 c49355d170e4b5a30f2d69dccd911ffc 290 SUPERFAMILY SSF140931 57 219 5.89E-31 T 12-10-2018 IPR036597 Fido-like domain superfamily Acife_1577 c49355d170e4b5a30f2d69dccd911ffc 290 Gene3D G3DSA:1.10.3290.10 4 228 1.1E-52 T 12-10-2018 IPR036597 Fido-like domain superfamily Acife_1577 c49355d170e4b5a30f2d69dccd911ffc 290 Pfam PF02661 Fic/DOC family 82 191 1.1E-15 T 12-10-2018 IPR003812 Fido domain Acife_0279 9648e21c0a271a10665155acabe4b26a 543 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 21 66 1.1E-10 T 12-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal Acife_2673 39482a4bc7314c591ed1ec08080ec4be 182 Pfam PF00156 Phosphoribosyl transferase domain 12 162 1.3E-19 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Acife_2673 39482a4bc7314c591ed1ec08080ec4be 182 SUPERFAMILY SSF53271 12 178 8.39E-40 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Acife_2673 39482a4bc7314c591ed1ec08080ec4be 182 Gene3D G3DSA:3.40.50.2020 4 182 1.4E-51 T 12-10-2018 Acife_1219 771aab0e28c07eef1e2c199003140e07 357 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 354 1.4E-53 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Acife_1219 771aab0e28c07eef1e2c199003140e07 357 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 353 5.6E-90 T 12-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 863 240.775 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 SUPERFAMILY SSF55021 676 743 1.64E-10 T 12-10-2018 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 SMART SM00471 438 584 3.6E-7 T 12-10-2018 IPR003607 HD/PDEase domain Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 SUPERFAMILY SSF81593 193 304 1.49E-8 T 12-10-2018 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 SUPERFAMILY SSF55021 786 848 5.24E-8 T 12-10-2018 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 PIRSF PIRSF006288 2 863 5.2E-256 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 SUPERFAMILY SSF81301 37 163 2.26E-17 T 12-10-2018 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 SUPERFAMILY SSF81891 391 584 1.53E-16 T 12-10-2018 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 Pfam PF08335 GlnD PII-uridylyltransferase 173 309 1.3E-28 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 26 856 8.3E-236 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 Gene3D G3DSA:3.30.70.260 680 753 5.2E-7 T 12-10-2018 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 Pfam PF01966 HD domain 462 570 9.1E-13 T 12-10-2018 IPR006674 HD domain Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 Gene3D G3DSA:1.10.3210.10 426 563 1.8E-10 T 12-10-2018 Acife_1839 4fb245608c43f208c93790f3bd6d0e13 863 Pfam PF01909 Nucleotidyltransferase domain 68 99 5.0E-6 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Acife_2152 7404d6ccb8eb87ebd083ef4cfbf8e568 161 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 3.8E-63 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Acife_2152 7404d6ccb8eb87ebd083ef4cfbf8e568 161 Gene3D G3DSA:3.30.70.1150 83 161 8.0E-29 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Acife_2152 7404d6ccb8eb87ebd083ef4cfbf8e568 161 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 5.0E-30 T 12-10-2018 Acife_2152 7404d6ccb8eb87ebd083ef4cfbf8e568 161 Pfam PF10369 Small subunit of acetolactate synthase 84 157 4.4E-27 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Acife_2152 7404d6ccb8eb87ebd083ef4cfbf8e568 161 Gene3D G3DSA:3.30.70.260 1 78 1.8E-33 T 12-10-2018 Acife_2152 7404d6ccb8eb87ebd083ef4cfbf8e568 161 SUPERFAMILY SSF55021 1 76 6.87E-23 T 12-10-2018 Acife_2152 7404d6ccb8eb87ebd083ef4cfbf8e568 161 SUPERFAMILY SSF55021 79 160 3.2E-25 T 12-10-2018 Acife_2152 7404d6ccb8eb87ebd083ef4cfbf8e568 161 Pfam PF13710 ACT domain 13 73 1.8E-14 T 12-10-2018 Acife_0120 8931615402060705ed43bb55b0780f86 419 SUPERFAMILY SSF53335 119 387 7.06E-76 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0120 8931615402060705ed43bb55b0780f86 419 PIRSF PIRSF003085 7 405 1.9E-127 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Acife_0120 8931615402060705ed43bb55b0780f86 419 Pfam PF02353 Mycolic acid cyclopropane synthetase 109 383 8.1E-97 T 12-10-2018 Acife_0120 8931615402060705ed43bb55b0780f86 419 Gene3D G3DSA:3.40.50.150 118 392 3.1E-100 T 12-10-2018 Acife_1953 82cb95733e6bf8197bd68ba2d5b2618c 975 Pfam PF00176 SNF2 family N-terminal domain 54 305 1.3E-31 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Acife_1953 82cb95733e6bf8197bd68ba2d5b2618c 975 SMART SM00490 474 554 1.5E-20 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1953 82cb95733e6bf8197bd68ba2d5b2618c 975 SUPERFAMILY SSF52540 35 246 2.47E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1953 82cb95733e6bf8197bd68ba2d5b2618c 975 SUPERFAMILY SSF52540 155 598 2.31E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1953 82cb95733e6bf8197bd68ba2d5b2618c 975 SMART SM00487 34 223 1.3E-22 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_1953 82cb95733e6bf8197bd68ba2d5b2618c 975 Gene3D G3DSA:3.40.50.10810 34 304 1.3E-58 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Acife_1953 82cb95733e6bf8197bd68ba2d5b2618c 975 Pfam PF00271 Helicase conserved C-terminal domain 446 554 2.7E-18 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1953 82cb95733e6bf8197bd68ba2d5b2618c 975 Gene3D G3DSA:3.40.50.300 383 587 1.4E-35 T 12-10-2018 Acife_2006 8e1b03b2bfe022b06c623debcf7b2904 382 Gene3D G3DSA:3.30.70.360 181 294 6.1E-127 T 12-10-2018 Acife_2006 8e1b03b2bfe022b06c623debcf7b2904 382 Pfam PF07687 Peptidase dimerisation domain 177 282 2.2E-23 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Acife_2006 8e1b03b2bfe022b06c623debcf7b2904 382 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.472 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Acife_2006 8e1b03b2bfe022b06c623debcf7b2904 382 SUPERFAMILY SSF53187 4 376 8.05E-66 T 12-10-2018 Acife_2006 8e1b03b2bfe022b06c623debcf7b2904 382 Pfam PF01546 Peptidase family M20/M25/M40 64 373 5.7E-41 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Acife_2006 8e1b03b2bfe022b06c623debcf7b2904 382 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Acife_2006 8e1b03b2bfe022b06c623debcf7b2904 382 SUPERFAMILY SSF55031 181 290 4.49E-27 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Acife_2006 8e1b03b2bfe022b06c623debcf7b2904 382 Gene3D G3DSA:3.40.630.10 9 364 6.1E-127 T 12-10-2018 Acife_2006 8e1b03b2bfe022b06c623debcf7b2904 382 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 6.1E-165 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Acife_1559 8337e8bc4341c11c920c7df1499d7d4f 116 Gene3D G3DSA:2.102.10.10 1 116 3.8E-25 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_1559 8337e8bc4341c11c920c7df1499d7d4f 116 Pfam PF00355 Rieske [2Fe-2S] domain 5 81 1.1E-14 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Acife_1559 8337e8bc4341c11c920c7df1499d7d4f 116 SUPERFAMILY SSF50022 3 115 1.57E-24 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_0525 c805cdfefa54e417cb4bcaa2e005bd95 661 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Acife_0525 c805cdfefa54e417cb4bcaa2e005bd95 661 PIRSF PIRSF015855 1 660 3.4E-177 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_0525 c805cdfefa54e417cb4bcaa2e005bd95 661 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 434 448 2.3E-15 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_0525 c805cdfefa54e417cb4bcaa2e005bd95 661 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 121 133 2.3E-15 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_0525 c805cdfefa54e417cb4bcaa2e005bd95 661 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 411 433 2.3E-15 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_0525 c805cdfefa54e417cb4bcaa2e005bd95 661 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 183 202 2.3E-15 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_0525 c805cdfefa54e417cb4bcaa2e005bd95 661 Pfam PF01555 DNA methylase 121 452 9.3E-38 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Acife_0525 c805cdfefa54e417cb4bcaa2e005bd95 661 SUPERFAMILY SSF53335 90 468 8.32E-56 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2820 408b89567c78a24451afc7f829d130d4 464 Gene3D G3DSA:3.40.1190.10 94 311 7.4E-75 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_2820 408b89567c78a24451afc7f829d130d4 464 Pfam PF08245 Mur ligase middle domain 110 294 1.2E-26 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Acife_2820 408b89567c78a24451afc7f829d130d4 464 SUPERFAMILY SSF53623 91 312 1.31E-68 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_2820 408b89567c78a24451afc7f829d130d4 464 Gene3D G3DSA:3.90.190.20 312 460 6.0E-51 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_2820 408b89567c78a24451afc7f829d130d4 464 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 461 42.666 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2820 408b89567c78a24451afc7f829d130d4 464 Pfam PF01225 Mur ligase family, catalytic domain 7 105 2.2E-27 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Acife_2820 408b89567c78a24451afc7f829d130d4 464 SUPERFAMILY SSF51984 6 92 5.89E-27 T 12-10-2018 Acife_2820 408b89567c78a24451afc7f829d130d4 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 397 2.1E-22 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Acife_2820 408b89567c78a24451afc7f829d130d4 464 Gene3D G3DSA:3.40.50.720 6 93 2.3E-30 T 12-10-2018 Acife_2820 408b89567c78a24451afc7f829d130d4 464 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 453 4.7E-162 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2820 408b89567c78a24451afc7f829d130d4 464 SUPERFAMILY SSF53244 313 454 8.61E-43 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_1720 f354f82a53c022beed4086a4b7b5324b 399 Hamap MF_01113 DNA polymerase IV [dinB]. 33 391 38.794 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Acife_1720 f354f82a53c022beed4086a4b7b5324b 399 SUPERFAMILY SSF100879 270 375 1.82E-23 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Acife_1720 f354f82a53c022beed4086a4b7b5324b 399 Gene3D G3DSA:1.10.150.20 206 267 1.3E-18 T 12-10-2018 Acife_1720 f354f82a53c022beed4086a4b7b5324b 399 Pfam PF00817 impB/mucB/samB family 39 186 1.5E-51 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Acife_1720 f354f82a53c022beed4086a4b7b5324b 399 Gene3D G3DSA:3.30.1490.100 272 381 1.0E-23 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Acife_1720 f354f82a53c022beed4086a4b7b5324b 399 Gene3D G3DSA:3.30.70.270 148 205 2.2E-22 T 12-10-2018 Acife_1720 f354f82a53c022beed4086a4b7b5324b 399 Pfam PF11798 IMS family HHH motif 198 229 2.0E-7 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Acife_1720 f354f82a53c022beed4086a4b7b5324b 399 Gene3D G3DSA:3.30.70.270 105 147 2.2E-8 T 12-10-2018 Acife_1720 f354f82a53c022beed4086a4b7b5324b 399 SUPERFAMILY SSF56672 33 266 8.36E-92 T 12-10-2018 Acife_1720 f354f82a53c022beed4086a4b7b5324b 399 Pfam PF11799 impB/mucB/samB family C-terminal domain 265 377 8.9E-15 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Acife_1720 f354f82a53c022beed4086a4b7b5324b 399 Gene3D G3DSA:2.30.40.20 44 104 9.5E-29 T 12-10-2018 Acife_1099 d8cef21cad0bb9d8febf376248fff975 421 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 21 421 7.1E-214 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Acife_1099 d8cef21cad0bb9d8febf376248fff975 421 SUPERFAMILY SSF53383 20 408 7.85E-108 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_1099 d8cef21cad0bb9d8febf376248fff975 421 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 19 412 53.676 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Acife_1099 d8cef21cad0bb9d8febf376248fff975 421 Gene3D G3DSA:3.90.1150.10 23 391 5.2E-157 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1099 d8cef21cad0bb9d8febf376248fff975 421 PIRSF PIRSF005572 20 401 1.4E-130 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Acife_1099 d8cef21cad0bb9d8febf376248fff975 421 Gene3D G3DSA:3.40.640.10 34 278 5.2E-157 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1099 d8cef21cad0bb9d8febf376248fff975 421 Pfam PF00266 Aminotransferase class-V 23 385 6.7E-88 T 12-10-2018 IPR000192 Aminotransferase class V domain Acife_0732 0e4134226d1fc92f403a20199bc3d60d 120 Pfam PF03259 Roadblock/LC7 domain 17 95 4.7E-15 T 12-10-2018 IPR004942 Roadblock/LAMTOR2 domain Acife_0732 0e4134226d1fc92f403a20199bc3d60d 120 Gene3D G3DSA:3.30.450.30 2 120 2.3E-27 T 12-10-2018 Acife_0732 0e4134226d1fc92f403a20199bc3d60d 120 SUPERFAMILY SSF103196 5 120 7.32E-27 T 12-10-2018 Acife_0732 0e4134226d1fc92f403a20199bc3d60d 120 SMART SM00960 6 96 6.2E-21 T 12-10-2018 IPR004942 Roadblock/LAMTOR2 domain Acife_1183 99d493dc3da2c64bd3ed71701fd2575f 91 Gene3D G3DSA:1.10.10.10 5 90 3.5E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1183 99d493dc3da2c64bd3ed71701fd2575f 91 SUPERFAMILY SSF46785 9 80 2.0E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0739 b453cfe84e6085a948a7e28e586bb6bf 130 Pfam PF09722 Protein of unknown function (DUF2384) 78 129 1.3E-10 T 12-10-2018 IPR024467 Domain of unknown function DUF2384 Acife_0739 b453cfe84e6085a948a7e28e586bb6bf 130 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 19 125 5.0E-37 T 12-10-2018 IPR020358 Uncharacterised protein family Y4oB Acife_1788 21b2ac966a0866e40fc72cee0c169d3e 375 Gene3D G3DSA:3.30.70.1400 55 143 4.3E-71 T 12-10-2018 Acife_1788 21b2ac966a0866e40fc72cee0c169d3e 375 Gene3D G3DSA:2.40.30.110 284 366 1.1E-19 T 12-10-2018 Acife_1788 21b2ac966a0866e40fc72cee0c169d3e 375 Gene3D G3DSA:4.10.1250.10 236 279 7.8E-17 T 12-10-2018 Acife_1788 21b2ac966a0866e40fc72cee0c169d3e 375 SUPERFAMILY SSF103025 7 281 6.28E-81 T 12-10-2018 Acife_1788 21b2ac966a0866e40fc72cee0c169d3e 375 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 356 3.2E-16 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Acife_1788 21b2ac966a0866e40fc72cee0c169d3e 375 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 257 9.0E-77 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Acife_1788 21b2ac966a0866e40fc72cee0c169d3e 375 Gene3D G3DSA:3.30.1360.120 11 235 4.3E-71 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Acife_1788 21b2ac966a0866e40fc72cee0c169d3e 375 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 361 5.6E-104 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Acife_1788 21b2ac966a0866e40fc72cee0c169d3e 375 PIRSF PIRSF006487 1 368 3.5E-73 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Acife_1788 21b2ac966a0866e40fc72cee0c169d3e 375 SUPERFAMILY SSF101790 274 363 3.92E-18 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Acife_2214 2842cc4b925f5abcb640324dd1a3f6a6 150 Pfam PF12840 Helix-turn-helix domain 14 69 3.8E-11 T 12-10-2018 Acife_2214 2842cc4b925f5abcb640324dd1a3f6a6 150 Gene3D G3DSA:1.10.10.10 3 92 5.5E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2214 2842cc4b925f5abcb640324dd1a3f6a6 150 SMART SM00418 12 91 0.0048 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_2214 2842cc4b925f5abcb640324dd1a3f6a6 150 SUPERFAMILY SSF46785 8 72 1.51E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1735 594bc0e5fd6f8d52d89c696788c7a4c0 109 Pfam PF00816 H-NS histone family 12 99 7.0E-13 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 Acife_1735 594bc0e5fd6f8d52d89c696788c7a4c0 109 Gene3D G3DSA:4.10.430.10 60 103 4.6E-5 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 Acife_1735 594bc0e5fd6f8d52d89c696788c7a4c0 109 SUPERFAMILY SSF81273 67 97 3.18E-6 T 12-10-2018 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 Gene3D G3DSA:1.10.290.10 274 396 1.6E-123 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 SUPERFAMILY SSF56712 1 544 5.62E-148 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 302 316 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 Gene3D G3DSA:2.70.20.10 204 473 1.6E-123 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 Pfam PF01131 DNA topoisomerase 146 522 2.7E-94 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 SMART SM00493 1 120 1.3E-15 T 12-10-2018 IPR006171 TOPRIM domain Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 Gene3D G3DSA:3.40.50.140 1 148 4.7E-46 T 12-10-2018 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 SMART SM00437 265 547 4.8E-52 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 Gene3D G3DSA:1.10.460.10 154 519 1.6E-123 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 Pfam PF01751 Toprim domain 2 128 7.5E-14 T 12-10-2018 IPR006171 TOPRIM domain Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 SMART SM00436 120 210 1.3E-31 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 506 520 7.0E-24 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 180 198 7.0E-24 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 382 398 7.0E-24 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 94 107 7.0E-24 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_1912 d4c2df1637be4fc1fcadc9d19101c2c3 616 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 307 316 7.0E-24 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Acife_0623 793a72dd32ffde0466f9f616d3a63a4e 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 4.2E-82 T 12-10-2018 Acife_0623 793a72dd32ffde0466f9f616d3a63a4e 257 Gene3D G3DSA:1.10.8.400 204 257 2.3E-20 T 12-10-2018 Acife_0623 793a72dd32ffde0466f9f616d3a63a4e 257 Gene3D G3DSA:3.40.50.720 7 202 9.8E-33 T 12-10-2018 Acife_0623 793a72dd32ffde0466f9f616d3a63a4e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0623 793a72dd32ffde0466f9f616d3a63a4e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0623 793a72dd32ffde0466f9f616d3a63a4e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0623 793a72dd32ffde0466f9f616d3a63a4e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0623 793a72dd32ffde0466f9f616d3a63a4e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0623 793a72dd32ffde0466f9f616d3a63a4e 257 SUPERFAMILY SSF51735 6 254 4.87E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0623 793a72dd32ffde0466f9f616d3a63a4e 257 PIRSF PIRSF000094 1 257 1.0E-105 T 12-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Acife_1100 ad7275137ec963ffcd6fd1f55571cf6d 143 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 3.1E-69 T 12-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Acife_1100 ad7275137ec963ffcd6fd1f55571cf6d 143 Gene3D G3DSA:3.90.1010.10 1 131 4.0E-59 T 12-10-2018 Acife_1100 ad7275137ec963ffcd6fd1f55571cf6d 143 Pfam PF01592 NifU-like N terminal domain 2 125 2.1E-56 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Acife_1100 ad7275137ec963ffcd6fd1f55571cf6d 143 SUPERFAMILY SSF82649 1 125 2.88E-49 T 12-10-2018 Acife_0114 9efe1d6de1966c2cffc93dbc3b765067 271 Gene3D G3DSA:1.10.150.690 45 135 8.6E-22 T 12-10-2018 Acife_0114 9efe1d6de1966c2cffc93dbc3b765067 271 Pfam PF09836 Putative DNA-binding domain 21 105 6.8E-15 T 12-10-2018 IPR018640 Putative DNA-binding domain, bacteria Acife_0985 127faf5681f8830f7194f9e9170b655d 294 Pfam PF03471 Transporter associated domain 202 277 3.0E-18 T 12-10-2018 IPR005170 Transporter-associated domain Acife_0985 127faf5681f8830f7194f9e9170b655d 294 Gene3D G3DSA:3.10.580.10 43 195 7.1E-52 T 12-10-2018 Acife_0985 127faf5681f8830f7194f9e9170b655d 294 SUPERFAMILY SSF54631 59 199 5.81E-33 T 12-10-2018 Acife_0985 127faf5681f8830f7194f9e9170b655d 294 Pfam PF00571 CBS domain 64 119 2.6E-6 T 12-10-2018 IPR000644 CBS domain Acife_0985 127faf5681f8830f7194f9e9170b655d 294 Pfam PF00571 CBS domain 136 184 1.4E-5 T 12-10-2018 IPR000644 CBS domain Acife_0985 127faf5681f8830f7194f9e9170b655d 294 Gene3D G3DSA:3.30.465.10 197 277 1.3E-24 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Acife_0985 127faf5681f8830f7194f9e9170b655d 294 SMART SM00116 136 184 1.5 T 12-10-2018 IPR000644 CBS domain Acife_0985 127faf5681f8830f7194f9e9170b655d 294 SMART SM00116 73 122 0.87 T 12-10-2018 IPR000644 CBS domain Acife_0985 127faf5681f8830f7194f9e9170b655d 294 SUPERFAMILY SSF56176 199 284 9.0E-21 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Acife_0985 127faf5681f8830f7194f9e9170b655d 294 SMART SM01091 200 278 3.0E-25 T 12-10-2018 IPR005170 Transporter-associated domain Acife_0129 13be573d5faf30860e8053af6c3695fe 275 Pfam PF13489 Methyltransferase domain 96 202 2.0E-13 T 12-10-2018 Acife_0129 13be573d5faf30860e8053af6c3695fe 275 Gene3D G3DSA:3.40.50.150 57 273 3.2E-34 T 12-10-2018 Acife_0129 13be573d5faf30860e8053af6c3695fe 275 SUPERFAMILY SSF53335 73 248 2.21E-23 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0143 065cbdf5827c42cd847f46586a352564 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 18 165 2.3E-54 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Acife_0143 065cbdf5827c42cd847f46586a352564 181 SUPERFAMILY SSF53098 17 170 5.56E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0143 065cbdf5827c42cd847f46586a352564 181 Gene3D G3DSA:3.30.420.10 18 173 6.8E-48 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_0143 065cbdf5827c42cd847f46586a352564 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 18 169 5.1E-55 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Acife_0143 065cbdf5827c42cd847f46586a352564 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 128 162 - T 12-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 Acife_0143 065cbdf5827c42cd847f46586a352564 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 16 168 45.203 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Acife_0143 065cbdf5827c42cd847f46586a352564 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 98 114 2.6E-36 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Acife_0143 065cbdf5827c42cd847f46586a352564 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 19 32 2.6E-36 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Acife_0143 065cbdf5827c42cd847f46586a352564 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 122 141 2.6E-36 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Acife_0143 065cbdf5827c42cd847f46586a352564 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 76 92 2.6E-36 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Acife_0143 065cbdf5827c42cd847f46586a352564 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 153 165 2.6E-36 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Acife_2045 5280cf01dc72cbf10a998dc36cc00c22 204 SUPERFAMILY SSF52540 1 195 9.9E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2045 5280cf01dc72cbf10a998dc36cc00c22 204 Pfam PF01712 Deoxynucleoside kinase 7 193 1.7E-26 T 12-10-2018 IPR031314 Deoxynucleoside kinase domain Acife_2045 5280cf01dc72cbf10a998dc36cc00c22 204 PIRSF PIRSF000705 1 203 2.0E-35 T 12-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 Acife_2045 5280cf01dc72cbf10a998dc36cc00c22 204 Gene3D G3DSA:3.40.50.300 4 198 5.1E-33 T 12-10-2018 Acife_1779 a31490d89417d7295652c50ba680e901 200 SUPERFAMILY SSF52833 3 198 1.12E-64 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1779 a31490d89417d7295652c50ba680e901 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 2.1E-11 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Acife_1779 a31490d89417d7295652c50ba680e901 200 Pfam PF00578 AhpC/TSA family 5 139 2.5E-33 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Acife_1779 a31490d89417d7295652c50ba680e901 200 Gene3D G3DSA:3.40.30.10 1 196 8.5E-74 T 12-10-2018 Acife_1779 a31490d89417d7295652c50ba680e901 200 PIRSF PIRSF000239 1 199 2.5E-64 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Acife_0961 4cfc0a42ab42be0e935c0f477b80ff75 188 SUPERFAMILY SSF52317 7 182 6.62E-49 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_0961 4cfc0a42ab42be0e935c0f477b80ff75 188 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 7 179 2.2E-50 T 12-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 Acife_0961 4cfc0a42ab42be0e935c0f477b80ff75 188 Pfam PF01965 DJ-1/PfpI family 7 168 2.6E-44 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Acife_0961 4cfc0a42ab42be0e935c0f477b80ff75 188 Gene3D G3DSA:3.40.50.880 4 186 3.3E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_2031 11d3e37f9e4a23c2bc2c396e478e50e6 403 Pfam PF00579 tRNA synthetases class I (W and Y) 236 343 1.0E-9 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_2031 11d3e37f9e4a23c2bc2c396e478e50e6 403 Pfam PF00579 tRNA synthetases class I (W and Y) 5 179 5.0E-47 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_2031 11d3e37f9e4a23c2bc2c396e478e50e6 403 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_2031 11d3e37f9e4a23c2bc2c396e478e50e6 403 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 3.7E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Acife_2031 11d3e37f9e4a23c2bc2c396e478e50e6 403 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 3.7E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Acife_2031 11d3e37f9e4a23c2bc2c396e478e50e6 403 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.7E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Acife_2031 11d3e37f9e4a23c2bc2c396e478e50e6 403 Gene3D G3DSA:1.10.240.10 259 363 2.8E-36 T 12-10-2018 Acife_2031 11d3e37f9e4a23c2bc2c396e478e50e6 403 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 172 3.0E-53 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Acife_2031 11d3e37f9e4a23c2bc2c396e478e50e6 403 Gene3D G3DSA:3.40.50.620 3 219 2.7E-70 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2031 11d3e37f9e4a23c2bc2c396e478e50e6 403 SUPERFAMILY SSF52374 4 396 5.09E-80 T 12-10-2018 Acife_1456 6ed84b7b1a5d52fea3c6abbe16201b4e 141 Gene3D G3DSA:3.30.310.70 20 140 5.5E-10 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_1456 6ed84b7b1a5d52fea3c6abbe16201b4e 141 Pfam PF03625 Domain of unknown function DUF302 50 107 9.0E-12 T 12-10-2018 IPR005180 Domain of unknown function DUF302 Acife_1456 6ed84b7b1a5d52fea3c6abbe16201b4e 141 SUPERFAMILY SSF103247 25 138 2.35E-22 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_0598 5e0f921a69c43aa8b5c6745318d91690 358 SUPERFAMILY SSF51395 2 350 1.04E-86 T 12-10-2018 Acife_0598 5e0f921a69c43aa8b5c6745318d91690 358 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 339 3.6E-69 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Acife_0598 5e0f921a69c43aa8b5c6745318d91690 358 Gene3D G3DSA:3.20.20.70 2 357 5.8E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_0468 9354d775d559db3efe459b12fc982f65 131 Pfam PF01850 PIN domain 6 121 7.0E-11 T 12-10-2018 IPR002716 PIN domain Acife_0468 9354d775d559db3efe459b12fc982f65 131 Gene3D G3DSA:3.40.50.1010 3 124 6.6E-8 T 12-10-2018 Acife_0468 9354d775d559db3efe459b12fc982f65 131 SUPERFAMILY SSF88723 6 124 2.3E-15 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 SUPERFAMILY SSF51735 5 160 1.58E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 158 1.5E-42 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 63 92 7.2E-39 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 238 265 7.2E-39 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 116 141 7.2E-39 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 7.2E-39 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 162 190 7.2E-39 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 SMART SM01350 173 305 2.0E-6 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 Gene3D G3DSA:3.40.50.720 1 171 5.6E-54 T 12-10-2018 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 Gene3D G3DSA:1.10.1040.10 172 304 1.0E-49 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 173 284 1.3E-24 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 6 306 3.4E-107 T 12-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 Acife_1369 ebd48b593d3790632b1e77298fd44d92 306 SUPERFAMILY SSF48179 171 305 3.67E-40 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Acife_0727 769aba539d1c9f339070ce1ea227eebd 227 Pfam PF02586 SOS response associated peptidase (SRAP) 1 209 8.2E-53 T 12-10-2018 IPR003738 SOS response associated peptidase (SRAP) Acife_0727 769aba539d1c9f339070ce1ea227eebd 227 Gene3D G3DSA:3.90.1680.10 1 220 4.8E-57 T 12-10-2018 IPR036590 SOS response associated peptidase-like Acife_0727 769aba539d1c9f339070ce1ea227eebd 227 SUPERFAMILY SSF143081 2 216 9.16E-57 T 12-10-2018 IPR036590 SOS response associated peptidase-like Acife_2922 8cb83ec1886b68620fbe549fadf9da5e 199 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Acife_2922 8cb83ec1886b68620fbe549fadf9da5e 199 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 1.7E-63 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Acife_2922 8cb83ec1886b68620fbe549fadf9da5e 199 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Acife_2922 8cb83ec1886b68620fbe549fadf9da5e 199 Gene3D G3DSA:3.30.230.40 1 91 6.3E-37 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Acife_2922 8cb83ec1886b68620fbe549fadf9da5e 199 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 43.001 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Acife_2922 8cb83ec1886b68620fbe549fadf9da5e 199 SUPERFAMILY SSF54211 90 180 2.53E-35 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2922 8cb83ec1886b68620fbe549fadf9da5e 199 SUPERFAMILY SSF54211 4 87 1.26E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Acife_2922 8cb83ec1886b68620fbe549fadf9da5e 199 Gene3D G3DSA:3.30.230.40 92 198 1.4E-40 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Acife_0794 a411ad575f95dc879a034c61b6139093 475 Gene3D G3DSA:3.20.20.60 8 335 1.0E-145 T 12-10-2018 Acife_0794 a411ad575f95dc879a034c61b6139093 475 SUPERFAMILY SSF50800 75 166 2.97E-19 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Acife_0794 a411ad575f95dc879a034c61b6139093 475 Gene3D G3DSA:2.40.33.10 75 169 1.0E-145 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 Pfam PF00224 Pyruvate kinase, barrel domain 7 338 3.6E-109 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 Gene3D G3DSA:3.40.1380.20 336 464 1.0E-145 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.9E-62 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 PRINTS PR01050 Pyruvate kinase family signature 64 80 2.9E-62 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.9E-62 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.9E-62 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.9E-62 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.9E-62 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 PRINTS PR01050 Pyruvate kinase family signature 187 201 2.9E-62 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 8 467 3.5E-142 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 Pfam PF02887 Pyruvate kinase, alpha/beta domain 361 467 3.6E-15 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 SUPERFAMILY SSF52935 323 469 9.81E-25 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_0794 a411ad575f95dc879a034c61b6139093 475 SUPERFAMILY SSF51621 5 338 5.23E-92 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Acife_2266 2fe8541afb19ab355f31d24a2f51ed22 312 Pfam PF01687 Riboflavin kinase 182 304 9.8E-33 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Acife_2266 2fe8541afb19ab355f31d24a2f51ed22 312 Pfam PF06574 FAD synthetase 16 164 2.1E-44 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Acife_2266 2fe8541afb19ab355f31d24a2f51ed22 312 Gene3D G3DSA:3.40.50.620 7 183 8.6E-53 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2266 2fe8541afb19ab355f31d24a2f51ed22 312 SMART SM00904 181 305 6.6E-49 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Acife_2266 2fe8541afb19ab355f31d24a2f51ed22 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 304 1.3E-83 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Acife_2266 2fe8541afb19ab355f31d24a2f51ed22 312 SUPERFAMILY SSF82114 172 307 8.28E-41 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Acife_2266 2fe8541afb19ab355f31d24a2f51ed22 312 SUPERFAMILY SSF52374 20 173 3.44E-28 T 12-10-2018 Acife_2266 2fe8541afb19ab355f31d24a2f51ed22 312 Gene3D G3DSA:2.40.30.30 184 312 9.7E-35 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Acife_2266 2fe8541afb19ab355f31d24a2f51ed22 312 PIRSF PIRSF004491 6 312 5.6E-95 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Acife_2915 2465ac00d7ce5c163c758f12af10165c 265 PIRSF PIRSF006648 2 262 2.0E-25 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Acife_2915 2465ac00d7ce5c163c758f12af10165c 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 205 224 1.3E-5 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Acife_2915 2465ac00d7ce5c163c758f12af10165c 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 33 54 1.3E-5 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Acife_2915 2465ac00d7ce5c163c758f12af10165c 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 185 204 1.3E-5 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Acife_2915 2465ac00d7ce5c163c758f12af10165c 265 Pfam PF01061 ABC-2 type transporter 19 228 2.0E-35 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Acife_1821 f7a9bdb6f6e92debb63a245b148f525e 432 Gene3D G3DSA:1.10.645.10 5 423 5.1E-105 T 12-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1821 f7a9bdb6f6e92debb63a245b148f525e 432 Pfam PF00374 Nickel-dependent hydrogenase 44 129 5.7E-11 T 12-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Acife_1821 f7a9bdb6f6e92debb63a245b148f525e 432 Pfam PF00374 Nickel-dependent hydrogenase 285 423 5.6E-9 T 12-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Acife_1821 f7a9bdb6f6e92debb63a245b148f525e 432 SUPERFAMILY SSF56762 14 423 1.57E-91 T 12-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1821 f7a9bdb6f6e92debb63a245b148f525e 432 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 414 423 - T 12-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Acife_2246 930e290ae66a42a95192fa683e44c341 134 Pfam PF01850 PIN domain 4 119 7.0E-14 T 12-10-2018 IPR002716 PIN domain Acife_2246 930e290ae66a42a95192fa683e44c341 134 Gene3D G3DSA:3.40.50.1010 1 130 7.0E-31 T 12-10-2018 Acife_2246 930e290ae66a42a95192fa683e44c341 134 SUPERFAMILY SSF88723 1 132 7.85E-27 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_2246 930e290ae66a42a95192fa683e44c341 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 127 10.141 T 12-10-2018 IPR022907 VapC family GO:0004540 Acife_2252 e2810c67544518fedd7cf13c0216e840 783 Gene3D G3DSA:1.20.1260.30 55 152 7.5E-9 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Acife_2252 e2810c67544518fedd7cf13c0216e840 783 Gene3D G3DSA:1.20.1260.30 2 54 1.1E-16 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Acife_2252 e2810c67544518fedd7cf13c0216e840 783 Gene3D G3DSA:3.40.50.150 156 438 3.3E-79 T 12-10-2018 Acife_2252 e2810c67544518fedd7cf13c0216e840 783 Pfam PF02384 N-6 DNA Methylase 135 444 2.4E-104 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Acife_2252 e2810c67544518fedd7cf13c0216e840 783 SUPERFAMILY SSF53335 6 490 7.41E-126 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2252 e2810c67544518fedd7cf13c0216e840 783 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 200 3.6E-22 T 12-10-2018 Acife_2252 e2810c67544518fedd7cf13c0216e840 783 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 319 3.6E-22 T 12-10-2018 Acife_2252 e2810c67544518fedd7cf13c0216e840 783 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 258 270 3.6E-22 T 12-10-2018 Acife_2252 e2810c67544518fedd7cf13c0216e840 783 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 158 174 3.6E-22 T 12-10-2018 Acife_2252 e2810c67544518fedd7cf13c0216e840 783 Pfam PF12161 HsdM N-terminal domain 9 121 4.0E-15 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Acife_2252 e2810c67544518fedd7cf13c0216e840 783 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 88 450 1.5E-75 T 12-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 Acife_2252 e2810c67544518fedd7cf13c0216e840 783 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 261 267 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Acife_1102 89b276d04333d48fa1343c4d9af4e881 205 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 44 202 3.5E-25 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Acife_1102 89b276d04333d48fa1343c4d9af4e881 205 Gene3D G3DSA:1.10.287.110 1 104 2.6E-24 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Acife_1102 89b276d04333d48fa1343c4d9af4e881 205 SUPERFAMILY SSF46565 33 104 1.02E-12 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Acife_1102 89b276d04333d48fa1343c4d9af4e881 205 Pfam PF07743 HSCB C-terminal oligomerisation domain 119 196 4.0E-12 T 12-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Acife_1102 89b276d04333d48fa1343c4d9af4e881 205 Gene3D G3DSA:1.20.1280.20 112 203 6.3E-18 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Acife_1102 89b276d04333d48fa1343c4d9af4e881 205 SUPERFAMILY SSF47144 108 203 4.32E-16 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Acife_1102 89b276d04333d48fa1343c4d9af4e881 205 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 32 203 19.038 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Acife_2819 6d6aff04070762ccc7b2c5fa09eec484 360 SUPERFAMILY SSF53756 4 355 3.14E-112 T 12-10-2018 Acife_2819 6d6aff04070762ccc7b2c5fa09eec484 360 Gene3D G3DSA:3.40.50.2000 160 339 4.6E-113 T 12-10-2018 Acife_2819 6d6aff04070762ccc7b2c5fa09eec484 360 Gene3D G3DSA:3.40.50.2000 6 345 4.6E-113 T 12-10-2018 Acife_2819 6d6aff04070762ccc7b2c5fa09eec484 360 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 355 35.448 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_2819 6d6aff04070762ccc7b2c5fa09eec484 360 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 327 7.6E-35 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Acife_2819 6d6aff04070762ccc7b2c5fa09eec484 360 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 142 1.5E-40 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_2819 6d6aff04070762ccc7b2c5fa09eec484 360 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 350 2.6E-104 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_2862 68c4bf3a07b9b2ac8a62abdef5222f0e 299 Gene3D G3DSA:3.40.50.720 118 258 3.8E-81 T 12-10-2018 Acife_2862 68c4bf3a07b9b2ac8a62abdef5222f0e 299 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 19 290 32.492 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Acife_2862 68c4bf3a07b9b2ac8a62abdef5222f0e 299 SUPERFAMILY SSF53223 16 118 1.32E-30 T 12-10-2018 Acife_2862 68c4bf3a07b9b2ac8a62abdef5222f0e 299 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 24 106 3.7E-26 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Acife_2862 68c4bf3a07b9b2ac8a62abdef5222f0e 299 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 135 193 6.6E-7 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Acife_2862 68c4bf3a07b9b2ac8a62abdef5222f0e 299 SUPERFAMILY SSF51735 119 292 3.43E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2862 68c4bf3a07b9b2ac8a62abdef5222f0e 299 Gene3D G3DSA:3.40.50.10860 22 277 3.8E-81 T 12-10-2018 Acife_2862 68c4bf3a07b9b2ac8a62abdef5222f0e 299 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 21 291 8.2E-67 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Acife_2505 9d68facb1e52c28214dc153fbf5e2497 362 SUPERFAMILY SSF141523 96 231 2.35E-23 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Acife_2505 9d68facb1e52c28214dc153fbf5e2497 362 Pfam PF03734 L,D-transpeptidase catalytic domain 98 231 1.2E-15 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Acife_2505 9d68facb1e52c28214dc153fbf5e2497 362 Gene3D G3DSA:2.40.440.10 24 304 5.0E-68 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Acife_2466 baa1b1fd0c93c23ee943e493e140a7ee 356 Gene3D G3DSA:3.30.390.50 262 352 3.2E-17 T 12-10-2018 Acife_2466 baa1b1fd0c93c23ee943e493e140a7ee 356 Gene3D G3DSA:3.30.930.10 8 256 3.0E-49 T 12-10-2018 Acife_2466 baa1b1fd0c93c23ee943e493e140a7ee 356 SUPERFAMILY SSF55681 9 252 5.26E-54 T 12-10-2018 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 Gene3D G3DSA:2.60.34.10 383 523 2.6E-63 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 SUPERFAMILY SSF100920 384 540 2.09E-60 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 Gene3D G3DSA:3.90.640.10 229 316 4.4E-163 T 12-10-2018 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 Gene3D G3DSA:3.30.420.40 5 379 4.4E-163 T 12-10-2018 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 Gene3D G3DSA:3.30.420.40 180 366 4.4E-163 T 12-10-2018 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.9E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 PRINTS PR00301 70kDa heat shock protein signature 138 158 6.9E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 PRINTS PR00301 70kDa heat shock protein signature 365 385 6.9E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 PRINTS PR00301 70kDa heat shock protein signature 388 407 6.9E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 PRINTS PR00301 70kDa heat shock protein signature 334 350 6.9E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.9E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 PRINTS PR00301 70kDa heat shock protein signature 198 208 6.9E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 PRINTS PR00301 70kDa heat shock protein signature 469 485 6.9E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.9E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 SUPERFAMILY SSF53067 187 382 5.01E-64 T 12-10-2018 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 Pfam PF00012 Hsp70 protein 4 600 9.0E-254 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 Gene3D G3DSA:1.20.1270.10 524 602 3.7E-14 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 SUPERFAMILY SSF53067 4 183 4.17E-68 T 12-10-2018 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 5.2E-283 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Acife_0592 9f6527013d7bf0ff27af4d23437709cf 634 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 35.821 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Acife_1182 fef94da1de2684de70ee7db22078d9d5 342 Pfam PF01569 PAP2 superfamily 199 321 1.2E-13 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Acife_1182 fef94da1de2684de70ee7db22078d9d5 342 SMART SM00014 194 319 2.0E-4 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Acife_1182 fef94da1de2684de70ee7db22078d9d5 342 Gene3D G3DSA:1.20.144.10 149 326 2.1E-10 T 12-10-2018 Acife_1182 fef94da1de2684de70ee7db22078d9d5 342 SUPERFAMILY SSF48317 131 324 2.62E-21 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Acife_3150 de30cf459cb7b914e295b06cbe4697f7 297 PRINTS PR00762 Chloride channel signature 93 110 4.1E-5 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_3150 de30cf459cb7b914e295b06cbe4697f7 297 PRINTS PR00762 Chloride channel signature 173 192 4.1E-5 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_3150 de30cf459cb7b914e295b06cbe4697f7 297 Gene3D G3DSA:1.10.3080.10 7 244 1.1E-47 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Acife_3150 de30cf459cb7b914e295b06cbe4697f7 297 Pfam PF00654 Voltage gated chloride channel 79 259 7.2E-39 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_3150 de30cf459cb7b914e295b06cbe4697f7 297 SUPERFAMILY SSF81340 20 242 6.02E-46 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Acife_2981 d0573a86222369a0f0a7aa3357164647 445 SUPERFAMILY SSF53098 126 409 5.06E-5 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_1148 d0573a86222369a0f0a7aa3357164647 445 SUPERFAMILY SSF53098 126 409 5.06E-5 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0585 3255b06b77f8477f0b7831894482e44a 459 Gene3D G3DSA:1.10.275.10 2 135 2.4E-53 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal Acife_0585 3255b06b77f8477f0b7831894482e44a 459 Pfam PF10415 Fumarase C C-terminus 405 457 2.5E-22 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Acife_0585 3255b06b77f8477f0b7831894482e44a 459 PRINTS PR00149 Fumarate lyase superfamily signature 131 149 1.4E-31 T 12-10-2018 IPR000362 Fumarate lyase family Acife_0585 3255b06b77f8477f0b7831894482e44a 459 PRINTS PR00149 Fumarate lyase superfamily signature 177 195 1.4E-31 T 12-10-2018 IPR000362 Fumarate lyase family Acife_0585 3255b06b77f8477f0b7831894482e44a 459 PRINTS PR00149 Fumarate lyase superfamily signature 268 295 1.4E-31 T 12-10-2018 IPR000362 Fumarate lyase family Acife_0585 3255b06b77f8477f0b7831894482e44a 459 PRINTS PR00149 Fumarate lyase superfamily signature 314 330 1.4E-31 T 12-10-2018 IPR000362 Fumarate lyase family Acife_0585 3255b06b77f8477f0b7831894482e44a 459 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 1 458 9.0E-217 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Acife_0585 3255b06b77f8477f0b7831894482e44a 459 Gene3D G3DSA:1.20.200.10 136 403 2.2E-113 T 12-10-2018 Acife_0585 3255b06b77f8477f0b7831894482e44a 459 ProSitePatterns PS00163 Fumarate lyases signature. 314 323 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Acife_0585 3255b06b77f8477f0b7831894482e44a 459 Hamap MF_00743 Fumarate hydratase class II [fumC]. 1 459 85.305 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Acife_0585 3255b06b77f8477f0b7831894482e44a 459 Gene3D G3DSA:1.10.40.30 405 459 4.6E-24 T 12-10-2018 Acife_0585 3255b06b77f8477f0b7831894482e44a 459 SUPERFAMILY SSF48557 1 457 2.2E-148 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 Acife_0585 3255b06b77f8477f0b7831894482e44a 459 Pfam PF00206 Lyase 11 339 1.6E-98 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal Acife_3236 6584adbd3f4cf381542efbaf26b99646 339 Gene3D G3DSA:3.90.550.10 3 241 7.0E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3236 6584adbd3f4cf381542efbaf26b99646 339 Pfam PF00535 Glycosyl transferase family 2 20 168 7.7E-16 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_3236 6584adbd3f4cf381542efbaf26b99646 339 SUPERFAMILY SSF53448 17 266 3.38E-31 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0681 3a7eafce109f5f93eecc33b7bfe9082e 231 Pfam PF04367 Protein of unknown function (DUF502) 68 171 1.0E-21 T 12-10-2018 IPR007462 Protein of unknown function DUF502 Acife_2642 5b4f417bef2fcdb247302c84c68e9ddb 158 Pfam PF00075 RNase H 6 137 3.6E-40 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Acife_2642 5b4f417bef2fcdb247302c84c68e9ddb 158 SUPERFAMILY SSF53098 4 144 9.61E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_2642 5b4f417bef2fcdb247302c84c68e9ddb 158 Gene3D G3DSA:3.30.420.10 2 151 1.3E-49 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_2642 5b4f417bef2fcdb247302c84c68e9ddb 158 Hamap MF_00042 Ribonuclease H [rnhA]. 3 151 30.645 T 12-10-2018 IPR022892 Ribonuclease HI GO:0004523 Acife_1682 3c1aa5773ab231ca6fe347162cacdc4b 174 SUPERFAMILY SSF53155 11 95 8.63E-7 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Acife_1682 3c1aa5773ab231ca6fe347162cacdc4b 174 SUPERFAMILY SSF46767 90 171 3.92E-30 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Acife_1682 3c1aa5773ab231ca6fe347162cacdc4b 174 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 14 88 2.6E-4 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Acife_1682 3c1aa5773ab231ca6fe347162cacdc4b 174 Gene3D G3DSA:1.10.10.10 90 173 1.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1682 3c1aa5773ab231ca6fe347162cacdc4b 174 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 92 171 2.2E-30 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Acife_1682 3c1aa5773ab231ca6fe347162cacdc4b 174 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 91 170 1.4E-33 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Acife_1682 3c1aa5773ab231ca6fe347162cacdc4b 174 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 141 147 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Acife_2217 17abd22bdee201f8410318898c903198 347 Pfam PF01594 AI-2E family transporter 6 331 2.9E-58 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like Acife_1968 1ca7b47d520cb58bbd8f773b0639f2d7 152 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1968 1ca7b47d520cb58bbd8f773b0639f2d7 152 SUPERFAMILY SSF54523 16 117 1.41E-13 T 12-10-2018 Acife_1968 1ca7b47d520cb58bbd8f773b0639f2d7 152 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 2.3E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1968 1ca7b47d520cb58bbd8f773b0639f2d7 152 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 34 1.2E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1968 1ca7b47d520cb58bbd8f773b0639f2d7 152 Gene3D G3DSA:3.30.700.10 16 148 5.0E-11 T 12-10-2018 Acife_2412 575293af64cd5da3e466b44655701372 443 Gene3D G3DSA:3.40.630.40 150 387 8.5E-67 T 12-10-2018 Acife_2412 575293af64cd5da3e466b44655701372 443 Gene3D G3DSA:3.10.350.10 388 443 3.6E-6 T 12-10-2018 IPR036779 LysM domain superfamily Acife_2412 575293af64cd5da3e466b44655701372 443 SMART SM00646 223 379 1.4E-43 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Acife_2412 575293af64cd5da3e466b44655701372 443 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 163 379 2.8E-43 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Acife_2412 575293af64cd5da3e466b44655701372 443 SUPERFAMILY SSF53187 161 382 2.26E-47 T 12-10-2018 Acife_0283 4b59c9ddc74894009e5ec939e172e7a9 283 Pfam PF00482 Type II secretion system (T2SS), protein F 116 241 2.5E-16 T 12-10-2018 IPR018076 Type II secretion system F domain Acife_0283 4b59c9ddc74894009e5ec939e172e7a9 283 Gene3D G3DSA:1.20.81.30 108 218 2.0E-10 T 12-10-2018 Acife_0241 0eb004af104d65b813dafe03c9e3a067 376 Gene3D G3DSA:3.30.750.24 6 109 1.2E-11 T 12-10-2018 IPR036513 STAS domain superfamily Acife_0241 0eb004af104d65b813dafe03c9e3a067 376 SUPERFAMILY SSF53850 152 305 7.29E-5 T 12-10-2018 Acife_0241 0eb004af104d65b813dafe03c9e3a067 376 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 143 357 1.4E-13 T 12-10-2018 Acife_0241 0eb004af104d65b813dafe03c9e3a067 376 SUPERFAMILY SSF52091 8 105 4.32E-12 T 12-10-2018 IPR036513 STAS domain superfamily Acife_1249 35b7b1c336c2b329c56c8f6bbbbd09eb 181 SUPERFAMILY SSF47413 2 66 1.01E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_1249 35b7b1c336c2b329c56c8f6bbbbd09eb 181 SMART SM00530 7 62 8.0E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_1249 35b7b1c336c2b329c56c8f6bbbbd09eb 181 Pfam PF01381 Helix-turn-helix 8 59 3.1E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_1249 35b7b1c336c2b329c56c8f6bbbbd09eb 181 Gene3D G3DSA:2.60.120.10 75 179 9.1E-19 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_1249 35b7b1c336c2b329c56c8f6bbbbd09eb 181 SUPERFAMILY SSF51182 47 178 1.94E-21 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Acife_1249 35b7b1c336c2b329c56c8f6bbbbd09eb 181 Pfam PF07883 Cupin domain 108 178 2.8E-12 T 12-10-2018 IPR013096 Cupin 2, conserved barrel Acife_1249 35b7b1c336c2b329c56c8f6bbbbd09eb 181 Gene3D G3DSA:1.10.260.40 1 71 2.2E-18 T 12-10-2018 Acife_0919 ee533fa10fbbfb047008910dc07fc3fd 342 Pfam PF01548 Transposase 8 145 1.0E-11 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Acife_0919 ee533fa10fbbfb047008910dc07fc3fd 342 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 6.0E-23 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Acife_0838 9aa5b27235f60df401c6c2c57b084df0 929 Pfam PF04851 Type III restriction enzyme, res subunit 157 344 1.8E-35 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Acife_0838 9aa5b27235f60df401c6c2c57b084df0 929 SMART SM00487 154 376 9.7E-19 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_0838 9aa5b27235f60df401c6c2c57b084df0 929 SUPERFAMILY SSF52540 141 380 8.42E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0838 9aa5b27235f60df401c6c2c57b084df0 929 Pfam PF08463 EcoEI R protein C-terminal 746 927 1.2E-49 T 12-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 Acife_0838 9aa5b27235f60df401c6c2c57b084df0 929 Gene3D G3DSA:3.40.50.300 138 357 2.8E-40 T 12-10-2018 Acife_0838 9aa5b27235f60df401c6c2c57b084df0 929 SUPERFAMILY SSF52540 180 563 1.05E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0838 9aa5b27235f60df401c6c2c57b084df0 929 Gene3D G3DSA:3.40.50.300 359 593 8.6E-48 T 12-10-2018 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 13 725 27.492 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 SUPERFAMILY SSF52540 192 491 2.14E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0728 97f8a63783a9112debb493129a75f3dc 727 SUPERFAMILY SSF47781 98 169 8.06E-11 T 12-10-2018 IPR010994 RuvA domain 2-like Acife_0728 97f8a63783a9112debb493129a75f3dc 727 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 17 722 7.2E-213 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 Gene3D G3DSA:3.40.50.300 491 716 1.1E-150 T 12-10-2018 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 Pfam PF14490 Helix-hairpin-helix containing domain 153 241 1.3E-30 T 12-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain Acife_0728 97f8a63783a9112debb493129a75f3dc 727 Gene3D G3DSA:2.30.30.940 582 653 1.1E-150 T 12-10-2018 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 Gene3D G3DSA:3.40.50.300 323 721 1.1E-150 T 12-10-2018 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 Pfam PF14520 Helix-hairpin-helix domain 101 152 9.7E-8 T 12-10-2018 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 SUPERFAMILY SSF52540 442 712 5.49E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0728 97f8a63783a9112debb493129a75f3dc 727 SMART SM00278 130 149 3.3 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 SMART SM00278 194 213 220.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 Gene3D G3DSA:1.10.10.2220 193 290 1.6E-20 T 12-10-2018 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 Pfam PF13604 AAA domain 333 511 3.1E-45 T 12-10-2018 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 Gene3D G3DSA:1.10.150.20 85 155 7.9E-11 T 12-10-2018 Acife_0728 97f8a63783a9112debb493129a75f3dc 727 SMART SM00382 346 521 2.8E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0728 97f8a63783a9112debb493129a75f3dc 727 Pfam PF13538 UvrD-like helicase C-terminal domain 653 700 1.6E-19 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain Acife_1002 0696d1c4e001fad0e579a1c7f57d632c 609 Pfam PF00664 ABC transporter transmembrane region 39 312 5.8E-46 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Acife_1002 0696d1c4e001fad0e579a1c7f57d632c 609 Gene3D G3DSA:1.20.1560.10 14 343 3.1E-84 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Acife_1002 0696d1c4e001fad0e579a1c7f57d632c 609 SMART SM00382 386 572 4.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1002 0696d1c4e001fad0e579a1c7f57d632c 609 Pfam PF00005 ABC transporter 377 526 3.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_1002 0696d1c4e001fad0e579a1c7f57d632c 609 Gene3D G3DSA:3.40.50.300 354 607 2.1E-89 T 12-10-2018 Acife_1002 0696d1c4e001fad0e579a1c7f57d632c 609 SUPERFAMILY SSF52540 351 595 1.44E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1002 0696d1c4e001fad0e579a1c7f57d632c 609 SUPERFAMILY SSF90123 17 344 6.67E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Acife_1002 0696d1c4e001fad0e579a1c7f57d632c 609 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_1033 f6cd666512b1cc94b7bbdf6976571580 194 Pfam PF13098 Thioredoxin-like domain 51 184 7.1E-11 T 12-10-2018 IPR012336 Thioredoxin-like fold Acife_1033 f6cd666512b1cc94b7bbdf6976571580 194 SUPERFAMILY SSF52833 34 183 2.4E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1033 f6cd666512b1cc94b7bbdf6976571580 194 Gene3D G3DSA:3.40.30.10 46 191 1.7E-24 T 12-10-2018 Acife_0552 68b2ae12d631893e5ab0202b440f02c2 659 SUPERFAMILY SSF52540 53 330 6.0E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0552 68b2ae12d631893e5ab0202b440f02c2 659 Gene3D G3DSA:3.40.50.300 206 368 2.0E-15 T 12-10-2018 Acife_0552 68b2ae12d631893e5ab0202b440f02c2 659 Gene3D G3DSA:3.40.50.300 47 174 1.0E-5 T 12-10-2018 Acife_0552 68b2ae12d631893e5ab0202b440f02c2 659 Pfam PF00350 Dynamin family 65 285 1.6E-15 T 12-10-2018 IPR022812 Dynamin superfamily Acife_2815 3391babf5a82f91817c2a6fb4eae717e 450 Pfam PF08245 Mur ligase middle domain 106 293 4.8E-44 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Acife_2815 3391babf5a82f91817c2a6fb4eae717e 450 SUPERFAMILY SSF53244 314 445 1.63E-35 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_2815 3391babf5a82f91817c2a6fb4eae717e 450 SUPERFAMILY SSF53623 101 310 1.2E-51 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_2815 3391babf5a82f91817c2a6fb4eae717e 450 Pfam PF01225 Mur ligase family, catalytic domain 28 74 6.7E-6 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Acife_2815 3391babf5a82f91817c2a6fb4eae717e 450 Gene3D G3DSA:3.40.1190.10 82 311 2.3E-69 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_2815 3391babf5a82f91817c2a6fb4eae717e 450 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 446 32.734 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2815 3391babf5a82f91817c2a6fb4eae717e 450 Gene3D G3DSA:3.90.190.20 312 449 6.2E-40 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_2815 3391babf5a82f91817c2a6fb4eae717e 450 Gene3D G3DSA:3.40.1390.10 1 81 2.9E-18 T 12-10-2018 Acife_2815 3391babf5a82f91817c2a6fb4eae717e 450 SUPERFAMILY SSF63418 1 98 3.01E-20 T 12-10-2018 IPR035911 MurE/MurF, N-terminal Acife_2815 3391babf5a82f91817c2a6fb4eae717e 450 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 445 8.4E-123 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2815 3391babf5a82f91817c2a6fb4eae717e 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 390 6.3E-11 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Acife_3007 b67305918448e141c3ce2f9c0e7f753d 116 SMART SM00411 26 115 2.3E-22 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_3007 b67305918448e141c3ce2f9c0e7f753d 116 Pfam PF00216 Bacterial DNA-binding protein 27 115 1.3E-25 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_3007 b67305918448e141c3ce2f9c0e7f753d 116 Gene3D G3DSA:4.10.520.10 26 115 7.5E-26 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_3007 b67305918448e141c3ce2f9c0e7f753d 116 SUPERFAMILY SSF47729 26 115 1.62E-22 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_3007 b67305918448e141c3ce2f9c0e7f753d 116 PRINTS PR01727 Prokaryotic integration host factor signature 83 96 7.0E-9 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_3007 b67305918448e141c3ce2f9c0e7f753d 116 PRINTS PR01727 Prokaryotic integration host factor signature 65 80 7.0E-9 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_3007 b67305918448e141c3ce2f9c0e7f753d 116 PRINTS PR01727 Prokaryotic integration host factor signature 99 113 7.0E-9 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0403 2135892bb188c1c7647b5f16f6d4b4a6 335 Pfam PF00589 Phage integrase family 178 314 2.3E-8 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_0403 2135892bb188c1c7647b5f16f6d4b4a6 335 Gene3D G3DSA:1.10.443.10 160 319 3.2E-18 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_0403 2135892bb188c1c7647b5f16f6d4b4a6 335 Gene3D G3DSA:1.10.150.130 58 156 3.6E-13 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_0403 2135892bb188c1c7647b5f16f6d4b4a6 335 SUPERFAMILY SSF56349 59 314 1.47E-44 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_1553 822ef0f84abe38cfd42f0c7bca7c9e6f 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 396 415 5.9E-17 T 12-10-2018 IPR003004 GspF/PilC family Acife_1553 822ef0f84abe38cfd42f0c7bca7c9e6f 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 77 89 5.9E-17 T 12-10-2018 IPR003004 GspF/PilC family Acife_1553 822ef0f84abe38cfd42f0c7bca7c9e6f 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 380 394 5.9E-17 T 12-10-2018 IPR003004 GspF/PilC family Acife_1553 822ef0f84abe38cfd42f0c7bca7c9e6f 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 176 204 5.9E-17 T 12-10-2018 IPR003004 GspF/PilC family Acife_1553 822ef0f84abe38cfd42f0c7bca7c9e6f 419 Gene3D G3DSA:1.20.81.30 68 183 6.8E-29 T 12-10-2018 Acife_1553 822ef0f84abe38cfd42f0c7bca7c9e6f 419 Gene3D G3DSA:1.20.81.30 268 378 9.4E-24 T 12-10-2018 Acife_1553 822ef0f84abe38cfd42f0c7bca7c9e6f 419 Pfam PF00482 Type II secretion system (T2SS), protein F 285 407 9.1E-24 T 12-10-2018 IPR018076 Type II secretion system F domain Acife_1553 822ef0f84abe38cfd42f0c7bca7c9e6f 419 Pfam PF00482 Type II secretion system (T2SS), protein F 82 204 3.7E-31 T 12-10-2018 IPR018076 Type II secretion system F domain Acife_3116 ae8fedf5424d0cefd016cc67328d519e 109 SUPERFAMILY SSF103481 4 104 6.67E-19 T 12-10-2018 Acife_3116 ae8fedf5424d0cefd016cc67328d519e 109 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.1E-30 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Acife_3116 ae8fedf5424d0cefd016cc67328d519e 109 Gene3D G3DSA:1.10.3730.20 1 109 4.1E-37 T 12-10-2018 Acife_0295 cbaa78da627d8006a2bf84f27daa26e8 304 Gene3D G3DSA:1.10.443.10 118 298 2.2E-63 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_0295 cbaa78da627d8006a2bf84f27daa26e8 304 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 6.6E-13 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Acife_0295 cbaa78da627d8006a2bf84f27daa26e8 304 Pfam PF00589 Phage integrase family 119 290 4.8E-45 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_0295 cbaa78da627d8006a2bf84f27daa26e8 304 Gene3D G3DSA:1.10.150.130 11 106 9.2E-16 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_0295 cbaa78da627d8006a2bf84f27daa26e8 304 SUPERFAMILY SSF56349 116 302 5.0E-52 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_0295 cbaa78da627d8006a2bf84f27daa26e8 304 SUPERFAMILY SSF47823 12 106 1.1E-24 T 12-10-2018 Acife_0295 cbaa78da627d8006a2bf84f27daa26e8 304 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 304 53.575 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Acife_0295 cbaa78da627d8006a2bf84f27daa26e8 304 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 17 303 3.1E-106 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Acife_0295 cbaa78da627d8006a2bf84f27daa26e8 304 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 304 56.259 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Acife_1045 df31030da0faf21ff08c9990987c5401 554 Gene3D G3DSA:3.30.420.10 155 361 5.2E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_1045 df31030da0faf21ff08c9990987c5401 554 Pfam PF00665 Integrase core domain 159 299 1.3E-11 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_1045 df31030da0faf21ff08c9990987c5401 554 SUPERFAMILY SSF53098 155 334 1.52E-16 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 381 3.7E-12 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 Gene3D G3DSA:3.40.120.10 1 143 4.8E-37 T 12-10-2018 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 171 257 6.9E-11 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 Gene3D G3DSA:3.40.120.10 258 377 2.4E-41 T 12-10-2018 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 SUPERFAMILY SSF53738 245 379 5.49E-8 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 Gene3D G3DSA:3.30.310.50 379 482 1.2E-24 T 12-10-2018 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 SUPERFAMILY SSF53738 161 259 3.92E-13 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 410 470 1.4E-7 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 Gene3D G3DSA:3.40.120.10 177 257 2.8E-28 T 12-10-2018 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 126 1.7E-20 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 SUPERFAMILY SSF55957 420 477 1.7E-11 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1814 135f33b02dfd18ae385e900bcb560d29 483 SUPERFAMILY SSF53738 2 129 1.02E-24 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Acife_1880 e1ede90b80fc4fa49e150ef61783557c 345 Gene3D G3DSA:3.20.20.140 4 344 2.6E-111 T 12-10-2018 Acife_1880 e1ede90b80fc4fa49e150ef61783557c 345 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 47.257 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1880 e1ede90b80fc4fa49e150ef61783557c 345 SUPERFAMILY SSF51556 3 343 6.35E-147 T 12-10-2018 IPR032466 Metal-dependent hydrolase Acife_1880 e1ede90b80fc4fa49e150ef61783557c 345 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 343 6.8E-142 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1880 e1ede90b80fc4fa49e150ef61783557c 345 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1880 e1ede90b80fc4fa49e150ef61783557c 345 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1880 e1ede90b80fc4fa49e150ef61783557c 345 PIRSF PIRSF001237 1 345 1.7E-143 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_1880 e1ede90b80fc4fa49e150ef61783557c 345 Pfam PF01979 Amidohydrolase family 12 306 5.5E-17 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Acife_0650 73871b5317e5ff638dc03bf3bc777702 153 Gene3D G3DSA:3.10.20.30 1 77 1.6E-27 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_0650 73871b5317e5ff638dc03bf3bc777702 153 Gene3D G3DSA:1.10.150.120 79 152 7.3E-25 T 12-10-2018 Acife_0650 73871b5317e5ff638dc03bf3bc777702 153 SUPERFAMILY SSF54292 2 79 2.1E-22 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Acife_0650 73871b5317e5ff638dc03bf3bc777702 153 Pfam PF01799 [2Fe-2S] binding domain 74 143 3.7E-24 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Acife_0650 73871b5317e5ff638dc03bf3bc777702 153 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Acife_0650 73871b5317e5ff638dc03bf3bc777702 153 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 54 8.3E-6 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Acife_0650 73871b5317e5ff638dc03bf3bc777702 153 SUPERFAMILY SSF47741 74 148 2.49E-27 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Acife_1179 8708a2f399f8f4d711dea16a123b9fb8 254 Gene3D G3DSA:3.20.20.140 28 253 1.1E-54 T 12-10-2018 Acife_1179 8708a2f399f8f4d711dea16a123b9fb8 254 SUPERFAMILY SSF89550 27 230 1.55E-9 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Acife_2640 8271b94054eb8f54e3b5f620dc29dd45 135 SUPERFAMILY SSF54593 1 129 3.09E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_2640 8271b94054eb8f54e3b5f620dc29dd45 135 Gene3D G3DSA:3.10.180.10 1 133 2.9E-47 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_2640 8271b94054eb8f54e3b5f620dc29dd45 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 3.4E-63 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Acife_2640 8271b94054eb8f54e3b5f620dc29dd45 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Acife_2640 8271b94054eb8f54e3b5f620dc29dd45 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 9.1E-26 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Acife_2493 ab501e7bd2c963c874f788e5b5aac2b3 177 Gene3D G3DSA:3.30.310.70 55 171 4.3E-19 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_2493 ab501e7bd2c963c874f788e5b5aac2b3 177 SUPERFAMILY SSF103247 47 172 5.36E-26 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_2493 ab501e7bd2c963c874f788e5b5aac2b3 177 Pfam PF03625 Domain of unknown function DUF302 79 137 3.9E-16 T 12-10-2018 IPR005180 Domain of unknown function DUF302 Acife_2493 ab501e7bd2c963c874f788e5b5aac2b3 177 PIRSF PIRSF021774 47 174 6.9E-23 T 12-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 Acife_1802 c60acdda768580233f2abe6131a8abac 160 Pfam PF05425 Copper resistance protein D 52 153 9.1E-11 T 12-10-2018 IPR008457 Copper resistance protein D GO:0016021 Acife_1810 303b702b0bd3c48b1ff6d3daf5239130 278 SMART SM01252 12 138 1.8E-56 T 12-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding Acife_1810 303b702b0bd3c48b1ff6d3daf5239130 278 Pfam PF04383 KilA-N domain 9 137 1.6E-28 T 12-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding Acife_3182 9e7ff453ade49b16d43d3cb942efa619 1516 Pfam PF13087 AAA domain 1149 1331 1.1E-12 T 12-10-2018 Acife_3182 9e7ff453ade49b16d43d3cb942efa619 1516 SUPERFAMILY SSF52980 1371 1470 1.37E-9 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Acife_3182 9e7ff453ade49b16d43d3cb942efa619 1516 Gene3D G3DSA:3.40.50.300 1170 1358 2.6E-23 T 12-10-2018 Acife_3182 9e7ff453ade49b16d43d3cb942efa619 1516 Gene3D G3DSA:3.40.960.10 1371 1470 6.9E-17 T 12-10-2018 Acife_3182 9e7ff453ade49b16d43d3cb942efa619 1516 Pfam PF13086 AAA domain 380 502 4.4E-7 T 12-10-2018 Acife_3182 9e7ff453ade49b16d43d3cb942efa619 1516 Gene3D G3DSA:3.40.50.300 357 643 7.2E-15 T 12-10-2018 Acife_3182 9e7ff453ade49b16d43d3cb942efa619 1516 SUPERFAMILY SSF52540 378 1331 9.46E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 SUPERFAMILY SSF56014 420 549 2.88E-31 T 12-10-2018 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 165 320 1.6E-47 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 345 409 7.8E-12 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 72 131 2.2E-16 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 SUPERFAMILY SSF55124 8 140 1.42E-31 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 PRINTS PR00397 Sirohaem Fe-binding site signature 422 440 8.5E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 PRINTS PR00397 Sirohaem Fe-binding site signature 470 488 8.5E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 3 562 54.828 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 470 486 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 SUPERFAMILY SSF56014 141 336 1.44E-56 T 12-10-2018 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 12 550 5.7E-233 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 Gene3D G3DSA:3.90.480.10 330 414 1.2E-21 T 12-10-2018 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 Gene3D G3DSA:3.30.413.10 418 552 7.7E-33 T 12-10-2018 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 SUPERFAMILY SSF55124 338 412 3.27E-16 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2626 7712a780f6e91cc2ac5a2bc584c34882 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 425 500 2.9 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Acife_2496 baed7e9e31305b9c7cb5cf89e8567acd 279 Gene3D G3DSA:2.40.10.340 119 265 1.5E-30 T 12-10-2018 Acife_2496 baed7e9e31305b9c7cb5cf89e8567acd 279 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 7 269 2.7E-42 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Acife_2496 baed7e9e31305b9c7cb5cf89e8567acd 279 PIRSF PIRSF038471 5 278 4.9E-54 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Acife_2496 baed7e9e31305b9c7cb5cf89e8567acd 279 Gene3D G3DSA:2.40.10.350 178 255 1.5E-30 T 12-10-2018 Acife_2496 baed7e9e31305b9c7cb5cf89e8567acd 279 Pfam PF04085 rod shape-determining protein MreC 121 267 1.1E-30 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Acife_1241 148b7179fed33a86b6738b33f26e67df 272 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 186 269 7.0E-31 T 12-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Acife_1241 148b7179fed33a86b6738b33f26e67df 272 Pfam PF07728 AAA domain (dynein-related subfamily) 39 173 1.4E-30 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Acife_1241 148b7179fed33a86b6738b33f26e67df 272 Gene3D G3DSA:3.40.50.300 22 191 2.8E-29 T 12-10-2018 Acife_1241 148b7179fed33a86b6738b33f26e67df 272 SUPERFAMILY SSF52540 8 208 3.73E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1279 4230b0e099de64105d7c6b19088c0444 222 TIGRFAM TIGR03481 HpnM: hopanoid biosynthesis associated membrane protein HpnM 28 219 1.4E-72 T 12-10-2018 IPR017842 Hopanoid biosynthesis-associated membrane protein HpnM Acife_1279 4230b0e099de64105d7c6b19088c0444 222 Gene3D G3DSA:1.10.10.640 87 210 8.1E-29 T 12-10-2018 Acife_1279 4230b0e099de64105d7c6b19088c0444 222 Gene3D G3DSA:3.10.450.50 73 185 8.1E-29 T 12-10-2018 Acife_1279 4230b0e099de64105d7c6b19088c0444 222 Pfam PF05494 MlaC protein 71 211 3.9E-34 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Acife_0882 98d4c522588068adadfd1fe8387b6422 353 Pfam PF06250 Protein of unknown function (DUF1016) 20 331 4.1E-124 T 12-10-2018 IPR009362 Protein of unknown function DUF1016 Acife_2656 4ad72c26e5a491b69c387f416dfe7773 443 Gene3D G3DSA:1.20.272.10 236 340 1.7E-43 T 12-10-2018 Acife_2656 4ad72c26e5a491b69c387f416dfe7773 443 Pfam PF16193 AAA C-terminal domain 184 262 1.4E-21 T 12-10-2018 IPR032423 AAA C-terminal domain Acife_2656 4ad72c26e5a491b69c387f416dfe7773 443 SMART SM00382 45 161 6.8E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2656 4ad72c26e5a491b69c387f416dfe7773 443 Pfam PF12002 MgsA AAA+ ATPase C terminal 263 429 1.9E-68 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Acife_2656 4ad72c26e5a491b69c387f416dfe7773 443 Gene3D G3DSA:1.10.8.60 161 234 1.5E-14 T 12-10-2018 Acife_2656 4ad72c26e5a491b69c387f416dfe7773 443 Gene3D G3DSA:1.10.3710.10 341 440 4.4E-34 T 12-10-2018 Acife_2656 4ad72c26e5a491b69c387f416dfe7773 443 SUPERFAMILY SSF48019 247 429 5.5E-74 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Acife_2656 4ad72c26e5a491b69c387f416dfe7773 443 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 134 2.0E-16 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Acife_2656 4ad72c26e5a491b69c387f416dfe7773 443 Gene3D G3DSA:3.40.50.300 6 160 1.9E-42 T 12-10-2018 Acife_2656 4ad72c26e5a491b69c387f416dfe7773 443 SUPERFAMILY SSF52540 7 230 4.53E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1142 345d198e1180ec70f86cd08a10a71f86 104 SUPERFAMILY SSF81301 10 94 1.2E-16 T 12-10-2018 Acife_1142 345d198e1180ec70f86cd08a10a71f86 104 Gene3D G3DSA:3.30.460.10 1 98 6.3E-25 T 12-10-2018 Acife_1142 345d198e1180ec70f86cd08a10a71f86 104 Pfam PF01909 Nucleotidyltransferase domain 11 86 2.7E-9 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Acife_1441 451b45d3c034470d3cb4848c77272631 314 SUPERFAMILY SSF53901 6 313 1.03E-74 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_1441 451b45d3c034470d3cb4848c77272631 314 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 186 3.9E-33 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Acife_1441 451b45d3c034470d3cb4848c77272631 314 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 224 313 1.0E-36 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Acife_1441 451b45d3c034470d3cb4848c77272631 314 Gene3D G3DSA:3.40.47.10 2 314 6.6E-131 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Acife_1441 451b45d3c034470d3cb4848c77272631 314 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 313 1.2E-132 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Acife_1441 451b45d3c034470d3cb4848c77272631 314 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 313 71.581 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Acife_3061 b56e7011260084cf54cfcf0d96232e97 556 Gene3D G3DSA:3.40.50.300 38 254 3.8E-15 T 12-10-2018 Acife_3061 b56e7011260084cf54cfcf0d96232e97 556 Gene3D G3DSA:3.40.140.10 272 485 5.6E-44 T 12-10-2018 Acife_3061 b56e7011260084cf54cfcf0d96232e97 556 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 400 436 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Acife_3061 b56e7011260084cf54cfcf0d96232e97 556 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 273 447 4.2E-14 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Acife_3061 b56e7011260084cf54cfcf0d96232e97 556 SUPERFAMILY SSF53927 276 457 2.44E-24 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Acife_0336 303bf51ec68f4646e2e843f77ac01528 101 Pfam PF11839 Alanine-zipper, major outer membrane lipoprotein 34 101 4.7E-16 T 12-10-2018 IPR021793 Major outer membrane lipoprotein Oprl Acife_1760 10cd74a3bebb34c2c5983757e10e0f58 144 Pfam PF16137 Domain of unknown function (DUF4845) 56 139 5.1E-20 T 12-10-2018 IPR032314 Protein of unknown function DUF4845 Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 SMART SM00267 157 329 1.0E-53 T 12-10-2018 IPR000160 GGDEF domain Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 Pfam PF00563 EAL domain 345 580 3.5E-63 T 12-10-2018 IPR001633 EAL domain Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 164 326 2.8E-41 T 12-10-2018 IPR000160 GGDEF domain Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 Gene3D G3DSA:3.30.70.270 165 337 3.9E-53 T 12-10-2018 Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 Gene3D G3DSA:3.20.20.450 341 594 1.1E-80 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 324 1.5E-45 T 12-10-2018 IPR000160 GGDEF domain Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 SUPERFAMILY SSF55781 8 154 1.96E-14 T 12-10-2018 Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 Gene3D G3DSA:3.30.450.40 7 164 7.2E-13 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 SUPERFAMILY SSF55073 173 330 1.57E-47 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 Pfam PF13185 GAF domain 20 154 3.5E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 SUPERFAMILY SSF141868 345 593 4.18E-74 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 SMART SM00065 18 165 0.0037 T 12-10-2018 IPR003018 GAF domain GO:0005515 Acife_0239 6e2e3a35055d913df245c03c3508dd0f 601 SMART SM00052 339 585 3.7E-83 T 12-10-2018 IPR001633 EAL domain Acife_2655 f6653930298f9c6141904b0d71e267de 421 PRINTS PR00981 Seryl-tRNA synthetase signature 261 273 1.8E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Acife_2655 f6653930298f9c6141904b0d71e267de 421 PRINTS PR00981 Seryl-tRNA synthetase signature 330 346 1.8E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Acife_2655 f6653930298f9c6141904b0d71e267de 421 PRINTS PR00981 Seryl-tRNA synthetase signature 348 364 1.8E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Acife_2655 f6653930298f9c6141904b0d71e267de 421 PRINTS PR00981 Seryl-tRNA synthetase signature 273 286 1.8E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Acife_2655 f6653930298f9c6141904b0d71e267de 421 PRINTS PR00981 Seryl-tRNA synthetase signature 313 326 1.8E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Acife_2655 f6653930298f9c6141904b0d71e267de 421 SUPERFAMILY SSF55681 116 414 7.35E-98 T 12-10-2018 Acife_2655 f6653930298f9c6141904b0d71e267de 421 Gene3D G3DSA:1.10.287.40 1 104 2.7E-20 T 12-10-2018 Acife_2655 f6653930298f9c6141904b0d71e267de 421 SUPERFAMILY SSF46589 1 112 9.42E-25 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Acife_2655 f6653930298f9c6141904b0d71e267de 421 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 413 5.9E-159 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Acife_2655 f6653930298f9c6141904b0d71e267de 421 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 418 40.864 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Acife_2655 f6653930298f9c6141904b0d71e267de 421 Gene3D G3DSA:3.30.930.10 105 421 4.6E-114 T 12-10-2018 Acife_2655 f6653930298f9c6141904b0d71e267de 421 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 396 2.0E-28 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Acife_2655 f6653930298f9c6141904b0d71e267de 421 PIRSF PIRSF001529 1 421 9.4E-169 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Acife_2655 f6653930298f9c6141904b0d71e267de 421 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 9.5E-25 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Acife_3019 d57a872dea7e7168c41a692f3b3df497 428 SUPERFAMILY SSF51905 5 428 1.52E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3019 d57a872dea7e7168c41a692f3b3df497 428 PRINTS PR00419 Adrenodoxin reductase family signature 6 28 3.4E-8 T 12-10-2018 Acife_3019 d57a872dea7e7168c41a692f3b3df497 428 PRINTS PR00419 Adrenodoxin reductase family signature 29 42 3.4E-8 T 12-10-2018 Acife_3019 d57a872dea7e7168c41a692f3b3df497 428 Pfam PF01593 Flavin containing amine oxidoreductase 16 402 2.1E-35 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Acife_3019 d57a872dea7e7168c41a692f3b3df497 428 Gene3D G3DSA:3.50.50.60 9 401 1.2E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_3019 d57a872dea7e7168c41a692f3b3df497 428 Gene3D G3DSA:3.90.660.50 85 382 1.2E-39 T 12-10-2018 Acife_0608 9bd65d8fd2438987b9552b9d4991ccac 611 SMART SM00642 119 477 1.4E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Acife_0608 9bd65d8fd2438987b9552b9d4991ccac 611 Pfam PF00128 Alpha amylase, catalytic domain 135 218 2.6E-11 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Acife_0608 9bd65d8fd2438987b9552b9d4991ccac 611 Gene3D G3DSA:3.20.20.80 107 518 4.7E-181 T 12-10-2018 Acife_0608 9bd65d8fd2438987b9552b9d4991ccac 611 SUPERFAMILY SSF51445 94 519 2.0E-111 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Acife_0608 9bd65d8fd2438987b9552b9d4991ccac 611 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 20 553 4.7E-211 T 12-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Acife_0608 9bd65d8fd2438987b9552b9d4991ccac 611 Gene3D G3DSA:2.60.40.10 7 103 1.5E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold Acife_0608 9bd65d8fd2438987b9552b9d4991ccac 611 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 8 70 8.9E-7 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Acife_0608 9bd65d8fd2438987b9552b9d4991ccac 611 Gene3D G3DSA:1.10.10.760 446 490 4.7E-181 T 12-10-2018 Acife_0608 9bd65d8fd2438987b9552b9d4991ccac 611 SUPERFAMILY SSF81296 9 98 2.0E-16 T 12-10-2018 IPR014756 Immunoglobulin E-set Acife_0608 9bd65d8fd2438987b9552b9d4991ccac 611 Pfam PF11941 Domain of unknown function (DUF3459) 509 600 1.4E-10 T 12-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Acife_0608 9bd65d8fd2438987b9552b9d4991ccac 611 PIRSF PIRSF006337 4 579 2.0E-220 T 12-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Acife_2222 51c29bc75239f90eb4811215431a1ebb 129 SUPERFAMILY SSF55298 3 126 1.73E-40 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Acife_2222 51c29bc75239f90eb4811215431a1ebb 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Acife_2222 51c29bc75239f90eb4811215431a1ebb 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 5 123 9.2E-43 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Acife_2222 51c29bc75239f90eb4811215431a1ebb 129 Pfam PF01042 Endoribonuclease L-PSP 8 124 1.2E-36 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Acife_2222 51c29bc75239f90eb4811215431a1ebb 129 Gene3D G3DSA:3.30.1330.40 3 128 6.5E-45 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Acife_2821 6fcc49f336847150d1a5ce0c5bee8ea8 295 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 15 290 9.3E-62 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2821 6fcc49f336847150d1a5ce0c5bee8ea8 295 SUPERFAMILY SSF56194 188 291 4.97E-35 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2821 6fcc49f336847150d1a5ce0c5bee8ea8 295 Gene3D G3DSA:3.30.43.10 3 77 2.6E-19 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Acife_2821 6fcc49f336847150d1a5ce0c5bee8ea8 295 Gene3D G3DSA:3.30.465.10 84 206 8.0E-29 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Acife_2821 6fcc49f336847150d1a5ce0c5bee8ea8 295 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 295 83.962 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2821 6fcc49f336847150d1a5ce0c5bee8ea8 295 Gene3D G3DSA:3.90.78.10 207 295 2.1E-33 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2821 6fcc49f336847150d1a5ce0c5bee8ea8 295 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 191 289 1.8E-29 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Acife_2821 6fcc49f336847150d1a5ce0c5bee8ea8 295 Pfam PF01565 FAD binding domain 30 156 7.4E-17 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Acife_2821 6fcc49f336847150d1a5ce0c5bee8ea8 295 SUPERFAMILY SSF56176 15 198 4.58E-36 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Acife_1288 42bd8ca32be4c0413a8fbdc3b1b4a59d 334 Pfam PF12849 PBP superfamily domain 16 300 6.0E-58 T 12-10-2018 IPR024370 PBP domain Acife_1288 42bd8ca32be4c0413a8fbdc3b1b4a59d 334 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 21 329 3.8E-108 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Acife_1288 42bd8ca32be4c0413a8fbdc3b1b4a59d 334 PIRSF PIRSF002756 6 332 4.0E-99 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Acife_1288 42bd8ca32be4c0413a8fbdc3b1b4a59d 334 Gene3D G3DSA:3.40.190.10 24 319 9.8E-113 T 12-10-2018 Acife_1288 42bd8ca32be4c0413a8fbdc3b1b4a59d 334 SUPERFAMILY SSF53850 20 330 4.43E-91 T 12-10-2018 Acife_1288 42bd8ca32be4c0413a8fbdc3b1b4a59d 334 Gene3D G3DSA:3.40.190.10 95 271 9.8E-113 T 12-10-2018 Acife_2221 5f0fd7b7b08917eb82daa70051577cfb 71 Gene3D G3DSA:1.10.3910.10 8 68 1.6E-10 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Acife_2221 5f0fd7b7b08917eb82daa70051577cfb 71 SUPERFAMILY SSF140683 10 60 4.32E-8 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Acife_2221 5f0fd7b7b08917eb82daa70051577cfb 71 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 10 60 1.1E-12 T 12-10-2018 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide Acife_2221 5f0fd7b7b08917eb82daa70051577cfb 71 Pfam PF08984 Domain of unknown function (DUF1858) 12 58 3.5E-8 T 12-10-2018 IPR015077 Domain of unknown function DUF1858 Acife_2864 2bb9647c5192f8900f22a22deb1372dc 162 Gene3D G3DSA:2.40.10.330 71 121 2.8E-57 T 12-10-2018 Acife_2864 2bb9647c5192f8900f22a22deb1372dc 162 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 7.6E-14 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Acife_2864 2bb9647c5192f8900f22a22deb1372dc 162 Gene3D G3DSA:3.10.50.40 3 154 2.8E-57 T 12-10-2018 Acife_2864 2bb9647c5192f8900f22a22deb1372dc 162 SUPERFAMILY SSF54534 3 140 2.36E-36 T 12-10-2018 Acife_2770 23f9221a2f35c99f5f2f65a008ff9590 338 Gene3D G3DSA:1.10.287.470 100 172 1.2E-5 T 12-10-2018 Acife_2770 23f9221a2f35c99f5f2f65a008ff9590 338 Gene3D G3DSA:1.10.287.470 76 99 1.2E-11 T 12-10-2018 Acife_2770 23f9221a2f35c99f5f2f65a008ff9590 338 Gene3D G3DSA:2.40.30.170 209 327 4.6E-36 T 12-10-2018 Acife_2770 23f9221a2f35c99f5f2f65a008ff9590 338 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 268 2.1E-19 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_2770 23f9221a2f35c99f5f2f65a008ff9590 338 Gene3D G3DSA:2.40.50.100 42 75 1.2E-11 T 12-10-2018 Acife_2770 23f9221a2f35c99f5f2f65a008ff9590 338 SUPERFAMILY SSF111369 106 307 5.23E-6 T 12-10-2018 Acife_2770 23f9221a2f35c99f5f2f65a008ff9590 338 SUPERFAMILY SSF111369 40 117 2.22E-11 T 12-10-2018 Acife_0034 39acadb1b48541145f512b6a24f7ac52 198 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 8 196 19.433 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Acife_0034 39acadb1b48541145f512b6a24f7ac52 198 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 6 193 7.8E-56 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Acife_0034 39acadb1b48541145f512b6a24f7ac52 198 SMART SM01207 11 188 1.5E-70 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Acife_0034 39acadb1b48541145f512b6a24f7ac52 198 Pfam PF02660 Glycerol-3-phosphate acyltransferase 13 187 8.8E-49 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Acife_1700 6c063de57f7e7740371748ad86e8ee87 306 SUPERFAMILY SSF48576 12 298 1.97E-78 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Acife_1700 6c063de57f7e7740371748ad86e8ee87 306 Gene3D G3DSA:1.10.600.10 6 306 6.9E-87 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Acife_1700 6c063de57f7e7740371748ad86e8ee87 306 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 224 236 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site Acife_1700 6c063de57f7e7740371748ad86e8ee87 306 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 90 106 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site Acife_1700 6c063de57f7e7740371748ad86e8ee87 306 Pfam PF00348 Polyprenyl synthetase 40 285 1.9E-53 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Acife_3213 ea16974ad37064f90c95f8b4df010ea5 443 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 268 428 5.8E-36 T 12-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain Acife_3213 ea16974ad37064f90c95f8b4df010ea5 443 SUPERFAMILY SSF142764 6 437 8.11E-85 T 12-10-2018 Acife_3213 ea16974ad37064f90c95f8b4df010ea5 443 Pfam PF07005 Putative sugar-binding N-terminal domain 6 244 1.1E-59 T 12-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain Acife_3213 ea16974ad37064f90c95f8b4df010ea5 443 Gene3D G3DSA:3.40.980.20 254 439 2.6E-11 T 12-10-2018 Acife_3213 ea16974ad37064f90c95f8b4df010ea5 443 Gene3D G3DSA:3.40.50.10840 6 248 1.4E-20 T 12-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily Acife_1529 a3ce9ed7cfb26aebc3438c863b6606ba 230 Gene3D G3DSA:1.20.1080.10 1 223 2.0E-60 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Acife_1529 a3ce9ed7cfb26aebc3438c863b6606ba 230 PRINTS PR00783 Major intrinsic protein family signature 39 63 2.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_1529 a3ce9ed7cfb26aebc3438c863b6606ba 230 PRINTS PR00783 Major intrinsic protein family signature 191 211 2.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_1529 a3ce9ed7cfb26aebc3438c863b6606ba 230 PRINTS PR00783 Major intrinsic protein family signature 124 142 2.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_1529 a3ce9ed7cfb26aebc3438c863b6606ba 230 PRINTS PR00783 Major intrinsic protein family signature 76 95 2.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_1529 a3ce9ed7cfb26aebc3438c863b6606ba 230 PRINTS PR00783 Major intrinsic protein family signature 6 25 2.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_1529 a3ce9ed7cfb26aebc3438c863b6606ba 230 PRINTS PR00783 Major intrinsic protein family signature 154 176 2.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_1529 a3ce9ed7cfb26aebc3438c863b6606ba 230 SUPERFAMILY SSF81338 3 216 6.41E-56 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Acife_1529 a3ce9ed7cfb26aebc3438c863b6606ba 230 Pfam PF00230 Major intrinsic protein 4 208 2.0E-42 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Acife_0922 77cb9797b88523398f5f835c2213fa67 136 Pfam PF12112 Protein of unknown function (DUF3579) 3 85 1.1E-17 T 12-10-2018 IPR021969 Protein of unknown function DUF3579 Acife_0922 77cb9797b88523398f5f835c2213fa67 136 Gene3D G3DSA:3.30.70.2340 1 99 2.0E-23 T 12-10-2018 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 279 7.1E-145 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 SUPERFAMILY SSF55681 1 279 6.78E-130 T 12-10-2018 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.9E-66 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 2.9E-66 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.9E-66 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.9E-66 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.9E-66 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.9E-66 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 Gene3D G3DSA:3.30.930.10 1 204 2.5E-109 T 12-10-2018 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 287 3.5E-148 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 Gene3D G3DSA:1.20.58.180 205 285 8.2E-31 T 12-10-2018 Acife_2513 a4df7dbfac04e702baa7aed302080de3 294 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 58.385 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Acife_3002 158cc91906f79cf08617858209014572 269 Pfam PF13708 Domain of unknown function (DUF4942) 77 257 8.3E-48 T 12-10-2018 IPR031339 Domain of unknown function DUF4942 Acife_1823 967a328fee13aa188061c541d91c07f9 350 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 326 4.2E-29 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Acife_1823 967a328fee13aa188061c541d91c07f9 350 Gene3D G3DSA:3.30.1330.10 21 169 3.2E-49 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Acife_1823 967a328fee13aa188061c541d91c07f9 350 PIRSF PIRSF005644 16 350 1.2E-126 T 12-10-2018 IPR011854 Carbamoyl dehydratase HypE Acife_1823 967a328fee13aa188061c541d91c07f9 350 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 164 3.5E-16 T 12-10-2018 IPR016188 PurM-like, N-terminal domain Acife_1823 967a328fee13aa188061c541d91c07f9 350 SUPERFAMILY SSF56042 172 346 8.67E-49 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Acife_1823 967a328fee13aa188061c541d91c07f9 350 Gene3D G3DSA:3.90.650.10 170 350 2.0E-57 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Acife_1823 967a328fee13aa188061c541d91c07f9 350 SUPERFAMILY SSF55326 21 169 5.41E-33 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Acife_1823 967a328fee13aa188061c541d91c07f9 350 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 19 350 2.0E-142 T 12-10-2018 IPR011854 Carbamoyl dehydratase HypE Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 Gene3D G3DSA:3.40.50.2300 7 125 4.5E-37 T 12-10-2018 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 Pfam PF00158 Sigma-54 interaction domain 145 304 6.0E-44 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 Pfam PF02954 Bacterial regulatory protein, Fis family 409 447 3.4E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 Gene3D G3DSA:1.10.10.60 402 455 1.7E-15 T 12-10-2018 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 Pfam PF00072 Response regulator receiver domain 8 113 1.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 SUPERFAMILY SSF52172 5 187 3.13E-42 T 12-10-2018 IPR011006 CheY-like superfamily Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 SUPERFAMILY SSF46689 351 451 2.2E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 Gene3D G3DSA:1.10.8.60 310 385 1.8E-21 T 12-10-2018 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 Gene3D G3DSA:3.40.50.300 130 309 3.7E-46 T 12-10-2018 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 PRINTS PR00819 CbxX/CfqX superfamily signature 221 240 2.9E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 PRINTS PR00819 CbxX/CfqX superfamily signature 166 181 2.9E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 PRINTS PR00819 CbxX/CfqX superfamily signature 354 366 2.9E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 SMART SM00448 6 117 5.1E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Acife_0020 c77452491d97bbfc8fbe6bbf7f049b34 466 SUPERFAMILY SSF52540 145 381 3.33E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1698 4fdc9b8fcb21dfc900e5e4ba7fc83058 405 Gene3D G3DSA:1.20.1250.20 16 205 3.8E-23 T 12-10-2018 Acife_1698 4fdc9b8fcb21dfc900e5e4ba7fc83058 405 SUPERFAMILY SSF103473 17 396 8.24E-60 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_1698 4fdc9b8fcb21dfc900e5e4ba7fc83058 405 Gene3D G3DSA:1.20.1250.20 219 403 7.9E-22 T 12-10-2018 Acife_1698 4fdc9b8fcb21dfc900e5e4ba7fc83058 405 Pfam PF07690 Major Facilitator Superfamily 27 362 4.0E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_0080 f31806e0b01c8898ff2b60aa10acc065 614 Gene3D G3DSA:1.25.40.650 179 271 3.2E-8 T 12-10-2018 Acife_0080 f31806e0b01c8898ff2b60aa10acc065 614 Gene3D G3DSA:3.40.50.2300 391 595 4.0E-41 T 12-10-2018 Acife_0080 f31806e0b01c8898ff2b60aa10acc065 614 SUPERFAMILY SSF53822 288 606 2.32E-47 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Acife_0080 f31806e0b01c8898ff2b60aa10acc065 614 Pfam PF04348 LppC putative lipoprotein 69 601 9.3E-54 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA Acife_0080 f31806e0b01c8898ff2b60aa10acc065 614 Gene3D G3DSA:3.40.50.2300 291 594 4.0E-41 T 12-10-2018 Acife_3211 f331ba695063ff7bb31bb95e933654d2 354 Gene3D G3DSA:3.30.465.40 2 184 6.2E-35 T 12-10-2018 Acife_3211 f331ba695063ff7bb31bb95e933654d2 354 Gene3D G3DSA:1.10.45.10 321 350 1.8E-5 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Acife_3211 f331ba695063ff7bb31bb95e933654d2 354 Pfam PF01565 FAD binding domain 4 133 1.8E-23 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Acife_3211 f331ba695063ff7bb31bb95e933654d2 354 SUPERFAMILY SSF56176 7 171 4.67E-36 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Acife_3211 f331ba695063ff7bb31bb95e933654d2 354 SUPERFAMILY SSF55103 178 352 2.22E-19 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Acife_2396 4ae664b7992827669ef6627ca3b1ecda 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 82 93 5.8E-14 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Acife_2396 4ae664b7992827669ef6627ca3b1ecda 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 152 5.8E-14 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Acife_2396 4ae664b7992827669ef6627ca3b1ecda 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 162 175 5.8E-14 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Acife_2396 4ae664b7992827669ef6627ca3b1ecda 317 Gene3D G3DSA:3.40.710.10 41 300 6.1E-73 T 12-10-2018 Acife_2396 4ae664b7992827669ef6627ca3b1ecda 317 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 52 274 3.5E-59 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Acife_2396 4ae664b7992827669ef6627ca3b1ecda 317 SUPERFAMILY SSF56601 27 299 6.25E-65 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Acife_0292 8cf813fe2124e12e42ed06101b473173 247 SUPERFAMILY SSF75217 1 242 3.1E-91 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Acife_0292 8cf813fe2124e12e42ed06101b473173 247 PIRSF PIRSF000386 1 245 2.8E-92 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Acife_0292 8cf813fe2124e12e42ed06101b473173 247 Gene3D G3DSA:1.10.1270.20 164 247 2.8E-31 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Acife_0292 8cf813fe2124e12e42ed06101b473173 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 103.572 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Acife_0292 8cf813fe2124e12e42ed06101b473173 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 226 2.8E-86 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Acife_0292 8cf813fe2124e12e42ed06101b473173 247 Gene3D G3DSA:3.40.1280.10 1 163 2.3E-60 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Acife_0292 8cf813fe2124e12e42ed06101b473173 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 220 2.0E-56 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Acife_2134 bb0a6d222a0d172cf77822cfd91c15e8 200 Pfam PF01292 Prokaryotic cytochrome b561 12 196 8.7E-22 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Acife_2134 bb0a6d222a0d172cf77822cfd91c15e8 200 Gene3D G3DSA:1.20.950.20 2 189 1.2E-10 T 12-10-2018 Acife_2134 bb0a6d222a0d172cf77822cfd91c15e8 200 SUPERFAMILY SSF81342 6 196 2.98E-16 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Acife_1383 0a47d4acf4bdd8856817118ff4fb9f11 337 SUPERFAMILY SSF53850 83 330 1.48E-34 T 12-10-2018 Acife_1383 0a47d4acf4bdd8856817118ff4fb9f11 337 Pfam PF13531 Bacterial extracellular solute-binding protein 84 330 1.6E-49 T 12-10-2018 Acife_1383 0a47d4acf4bdd8856817118ff4fb9f11 337 Gene3D G3DSA:3.40.190.10 174 293 2.7E-19 T 12-10-2018 Acife_1383 0a47d4acf4bdd8856817118ff4fb9f11 337 Gene3D G3DSA:3.40.190.10 86 330 2.7E-19 T 12-10-2018 Acife_0824 e963a2a0ec02bc3ea40308ff48c309cb 486 SUPERFAMILY SSF56954 22 465 2.09E-65 T 12-10-2018 Acife_0824 e963a2a0ec02bc3ea40308ff48c309cb 486 Gene3D G3DSA:1.20.1600.10 69 468 6.3E-61 T 12-10-2018 Acife_0824 e963a2a0ec02bc3ea40308ff48c309cb 486 Pfam PF02321 Outer membrane efflux protein 85 263 1.3E-23 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_0824 e963a2a0ec02bc3ea40308ff48c309cb 486 Pfam PF02321 Outer membrane efflux protein 290 462 9.4E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_1914 4f0921cb6af54fd7edb417b392bd2687 579 SUPERFAMILY SSF88659 484 564 5.23E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Acife_1914 4f0921cb6af54fd7edb417b392bd2687 579 Gene3D G3DSA:1.20.140.160 458 568 3.9E-5 T 12-10-2018 Acife_1914 4f0921cb6af54fd7edb417b392bd2687 579 Pfam PF04545 Sigma-70, region 4 522 564 1.1E-6 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Acife_1300 85daebde452b3b954f1f9b4248e5ad4b 253 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.867 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Acife_1300 85daebde452b3b954f1f9b4248e5ad4b 253 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Acife_1300 85daebde452b3b954f1f9b4248e5ad4b 253 SUPERFAMILY SSF64005 10 233 2.75E-85 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Acife_1300 85daebde452b3b954f1f9b4248e5ad4b 253 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.1E-78 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Acife_1300 85daebde452b3b954f1f9b4248e5ad4b 253 Gene3D G3DSA:3.40.1180.10 5 239 6.7E-92 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Acife_1300 85daebde452b3b954f1f9b4248e5ad4b 253 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 8.5E-85 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Acife_0795 1b8d69c7bf53b01e03e37bd0370a22a2 306 Pfam PF01791 DeoC/LacD family aldolase 35 272 1.9E-43 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Acife_0795 1b8d69c7bf53b01e03e37bd0370a22a2 306 PIRSF PIRSF038992 13 305 4.3E-59 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Acife_0795 1b8d69c7bf53b01e03e37bd0370a22a2 306 SMART SM01133 33 273 1.6E-20 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Acife_0795 1b8d69c7bf53b01e03e37bd0370a22a2 306 Gene3D G3DSA:3.20.20.70 3 306 4.0E-83 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_0795 1b8d69c7bf53b01e03e37bd0370a22a2 306 SUPERFAMILY SSF51569 22 290 1.36E-56 T 12-10-2018 Acife_1694 6401d9bc33a513138759cb9514a7b68a 151 Pfam PF13767 Domain of unknown function (DUF4168) 68 142 9.5E-13 T 12-10-2018 IPR025433 Domain of unknown function DUF4168 Acife_0574 0a32a5975d421fa6d37c683df0e79e4d 556 PIRSF PIRSF000076 1 554 4.2E-228 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Acife_0574 0a32a5975d421fa6d37c683df0e79e4d 556 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 553 21.575 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Acife_0574 0a32a5975d421fa6d37c683df0e79e4d 556 Gene3D G3DSA:3.40.50.2030 237 381 4.9E-63 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Acife_0574 0a32a5975d421fa6d37c683df0e79e4d 556 Gene3D G3DSA:1.20.1270.20 153 235 6.8E-28 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Acife_0574 0a32a5975d421fa6d37c683df0e79e4d 556 Gene3D G3DSA:1.20.1270.20 1 143 4.0E-37 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Acife_0574 0a32a5975d421fa6d37c683df0e79e4d 556 Gene3D G3DSA:3.40.50.2030 382 552 3.9E-58 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Acife_0574 0a32a5975d421fa6d37c683df0e79e4d 556 SUPERFAMILY SSF56821 1 551 6.15E-183 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Acife_0574 0a32a5975d421fa6d37c683df0e79e4d 556 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 4.6E-245 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Acife_0574 0a32a5975d421fa6d37c683df0e79e4d 556 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 7.7E-154 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Acife_1496 d6d79fab8182bcafa90f6d78a7cf5573 86 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 53 2.4E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_1496 d6d79fab8182bcafa90f6d78a7cf5573 86 SUPERFAMILY SSF89447 5 56 1.05E-5 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_1496 d6d79fab8182bcafa90f6d78a7cf5573 86 Gene3D G3DSA:2.10.260.10 2 82 3.7E-24 T 12-10-2018 Acife_2740 b46792dca85c27b77ca6f501aa475035 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 75 1.0E-17 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Acife_2740 b46792dca85c27b77ca6f501aa475035 218 Gene3D G3DSA:3.40.30.10 1 79 2.7E-24 T 12-10-2018 Acife_2740 b46792dca85c27b77ca6f501aa475035 218 SUPERFAMILY SSF52833 2 101 8.31E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2740 b46792dca85c27b77ca6f501aa475035 218 Pfam PF13410 Glutathione S-transferase, C-terminal domain 122 181 3.1E-9 T 12-10-2018 Acife_2740 b46792dca85c27b77ca6f501aa475035 218 Gene3D G3DSA:1.20.1050.10 80 207 2.7E-23 T 12-10-2018 Acife_2740 b46792dca85c27b77ca6f501aa475035 218 SUPERFAMILY SSF47616 78 195 3.48E-22 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Acife_2166 723fc0ca6e398d8057acc272d24f42cd 390 Gene3D G3DSA:1.10.3210.10 5 385 3.7E-134 T 12-10-2018 Acife_2166 723fc0ca6e398d8057acc272d24f42cd 390 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 36 170 4.7E-58 T 12-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Acife_2166 723fc0ca6e398d8057acc272d24f42cd 390 Pfam PF13286 Phosphohydrolase-associated domain 291 382 5.1E-29 T 12-10-2018 IPR026875 Phosphohydrolase-associated domain Acife_2166 723fc0ca6e398d8057acc272d24f42cd 390 SUPERFAMILY SSF109604 27 387 5.16E-88 T 12-10-2018 Acife_2166 723fc0ca6e398d8057acc272d24f42cd 390 SMART SM00471 69 213 5.0E-10 T 12-10-2018 IPR003607 HD/PDEase domain Acife_2166 723fc0ca6e398d8057acc272d24f42cd 390 Pfam PF01966 HD domain 73 203 3.6E-15 T 12-10-2018 IPR006674 HD domain Acife_2166 723fc0ca6e398d8057acc272d24f42cd 390 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 13 384 38.682 T 12-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 Acife_0060 0e219b69b092c805a42213e76fc92605 162 Pfam PF06146 Phosphate-starvation-inducible E 80 147 3.2E-13 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like Acife_1388 fd9e1459570d35d448df7456d656d266 362 PIRSF PIRSF000525 1 362 7.6E-146 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Acife_1388 fd9e1459570d35d448df7456d656d266 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 360 2.7E-152 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Acife_1388 fd9e1459570d35d448df7456d656d266 362 Gene3D G3DSA:3.40.640.10 18 257 5.8E-86 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1388 fd9e1459570d35d448df7456d656d266 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Acife_1388 fd9e1459570d35d448df7456d656d266 362 SUPERFAMILY SSF53383 5 359 1.98E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_1388 fd9e1459570d35d448df7456d656d266 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 361 49.825 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Acife_1388 fd9e1459570d35d448df7456d656d266 362 Gene3D G3DSA:3.90.1150.10 259 362 6.6E-38 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1388 fd9e1459570d35d448df7456d656d266 362 Pfam PF00266 Aminotransferase class-V 5 349 1.6E-58 T 12-10-2018 IPR000192 Aminotransferase class V domain Acife_1255 ca31804050ea01a7aebc0d97d42ee280 104 Gene3D G3DSA:1.10.20.30 8 54 3.7E-9 T 12-10-2018 Acife_1255 ca31804050ea01a7aebc0d97d42ee280 104 Pfam PF05164 Cell division protein ZapA 13 96 1.7E-17 T 12-10-2018 IPR007838 Cell division protein ZapA-like Acife_1255 ca31804050ea01a7aebc0d97d42ee280 104 SUPERFAMILY SSF102829 13 96 2.48E-16 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily Acife_2893 4fe8a32d57ae08727ab12401d7a5b90a 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.234 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Acife_2893 4fe8a32d57ae08727ab12401d7a5b90a 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 4.0E-30 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Acife_2893 4fe8a32d57ae08727ab12401d7a5b90a 90 PIRSF PIRSF029827 1 90 2.0E-39 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Acife_2893 4fe8a32d57ae08727ab12401d7a5b90a 90 SUPERFAMILY SSF111148 1 88 2.75E-39 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Acife_2893 4fe8a32d57ae08727ab12401d7a5b90a 90 Gene3D G3DSA:1.10.3880.10 1 90 7.3E-42 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Acife_2893 4fe8a32d57ae08727ab12401d7a5b90a 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.9E-43 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Acife_1012 8c46102f5b55e3dd4c0082e5bb20f7ac 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 175 218 5.6E-20 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Acife_1012 8c46102f5b55e3dd4c0082e5bb20f7ac 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 185 198 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Acife_1012 8c46102f5b55e3dd4c0082e5bb20f7ac 218 PIRSF PIRSF000190 2 218 2.4E-72 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Acife_1012 8c46102f5b55e3dd4c0082e5bb20f7ac 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 5 218 6.7E-73 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Acife_1012 8c46102f5b55e3dd4c0082e5bb20f7ac 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 13 218 35.618 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Acife_1012 8c46102f5b55e3dd4c0082e5bb20f7ac 218 Gene3D G3DSA:2.30.110.10 4 218 3.4E-77 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Acife_1012 8c46102f5b55e3dd4c0082e5bb20f7ac 218 SUPERFAMILY SSF50475 19 218 1.32E-59 T 12-10-2018 Acife_1012 8c46102f5b55e3dd4c0082e5bb20f7ac 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 44 122 4.5E-23 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Acife_2485 a4be172ce1f1b3632e33ac31c94f25fa 169 Pfam PF01967 MoaC family 18 153 8.6E-51 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2485 a4be172ce1f1b3632e33ac31c94f25fa 169 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 5 161 32.429 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2485 a4be172ce1f1b3632e33ac31c94f25fa 169 Gene3D G3DSA:3.30.70.640 4 164 5.3E-61 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2485 a4be172ce1f1b3632e33ac31c94f25fa 169 SUPERFAMILY SSF55040 14 158 6.67E-56 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_2485 a4be172ce1f1b3632e33ac31c94f25fa 169 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 8 154 3.8E-57 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 Pfam PF00226 DnaJ domain 5 66 5.5E-24 T 12-10-2018 IPR001623 DnaJ domain Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 SUPERFAMILY SSF46565 2 122 2.22E-32 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 SUPERFAMILY SSF49493 124 217 1.83E-19 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 PRINTS PR00625 DnaJ domain signature 7 25 3.5E-23 T 12-10-2018 IPR001623 DnaJ domain Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 PRINTS PR00625 DnaJ domain signature 25 40 3.5E-23 T 12-10-2018 IPR001623 DnaJ domain Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 PRINTS PR00625 DnaJ domain signature 61 80 3.5E-23 T 12-10-2018 IPR001623 DnaJ domain Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 PRINTS PR00625 DnaJ domain signature 41 61 3.5E-23 T 12-10-2018 IPR001623 DnaJ domain Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 Gene3D G3DSA:2.60.260.20 126 208 1.7E-21 T 12-10-2018 Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 SUPERFAMILY SSF49493 213 299 8.37E-23 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 SMART SM00271 4 61 9.6E-26 T 12-10-2018 IPR001623 DnaJ domain Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 Pfam PF01556 DnaJ C terminal domain 132 288 1.6E-39 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 Gene3D G3DSA:2.60.260.20 209 310 3.1E-30 T 12-10-2018 Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 12-10-2018 IPR018253 DnaJ domain, conserved site Acife_3105 fdb0d43f4b331c9105e0323bb828fd22 312 Gene3D G3DSA:1.10.287.110 2 121 2.1E-35 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Acife_2562 85cf58aee0bc86e64f3a77636bb6bfdc 374 SUPERFAMILY SSF47240 43 371 2.23E-94 T 12-10-2018 IPR009078 Ferritin-like superfamily Acife_2562 85cf58aee0bc86e64f3a77636bb6bfdc 374 Gene3D G3DSA:1.10.620.20 28 367 9.6E-112 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Acife_2562 85cf58aee0bc86e64f3a77636bb6bfdc 374 Pfam PF00268 Ribonucleotide reductase, small chain 54 341 2.9E-81 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2562 85cf58aee0bc86e64f3a77636bb6bfdc 374 PIRSF PIRSF000355 25 374 2.4E-132 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Acife_2677 20e5f84dc5fe38936bfd589ce2104493 236 SUPERFAMILY SSF48317 18 199 2.62E-23 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Acife_2677 20e5f84dc5fe38936bfd589ce2104493 236 Gene3D G3DSA:1.20.144.10 110 213 4.7E-17 T 12-10-2018 Acife_2677 20e5f84dc5fe38936bfd589ce2104493 236 Pfam PF01569 PAP2 superfamily 97 197 2.7E-14 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Acife_2677 20e5f84dc5fe38936bfd589ce2104493 236 SMART SM00014 80 192 3.7E-12 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Acife_1797 001e4b393c64525befb108a0552719cf 697 Pfam PF00535 Glycosyl transferase family 2 103 281 5.3E-15 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_1797 001e4b393c64525befb108a0552719cf 697 SUPERFAMILY SSF53448 95 383 1.13E-25 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1797 001e4b393c64525befb108a0552719cf 697 Gene3D G3DSA:3.90.550.10 91 325 1.3E-17 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2944 cad18cf39cc8379a9b9c0448391152c9 306 Pfam PF11348 Protein of unknown function (DUF3150) 3 248 5.3E-35 T 12-10-2018 IPR021496 Protein of unknown function DUF3150 Acife_2729 443fca37eb3341910882065470340c0d 106 Pfam PF11154 Protein of unknown function (DUF2934) 66 101 3.7E-11 T 12-10-2018 IPR021327 Protein of unknown function DUF2934 Acife_2812 0be4a31ee747b40e79a7ee45d43cb25f 87 Pfam PF04999 Cell division protein FtsL 4 85 1.8E-17 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Acife_2812 0be4a31ee747b40e79a7ee45d43cb25f 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 6 85 1.3E-20 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Acife_2812 0be4a31ee747b40e79a7ee45d43cb25f 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 15.097 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Acife_0546 47fdecfb90d092e190dd63c883acf8e2 218 SUPERFAMILY SSF89392 32 211 5.89E-33 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Acife_0546 47fdecfb90d092e190dd63c883acf8e2 218 Pfam PF03550 Outer membrane lipoprotein LolB 62 210 1.2E-35 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Acife_0546 47fdecfb90d092e190dd63c883acf8e2 218 Gene3D G3DSA:2.50.20.10 46 212 1.1E-37 T 12-10-2018 Acife_0546 47fdecfb90d092e190dd63c883acf8e2 218 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 19 211 4.6E-23 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Acife_0067 1d696d41871e22cb5c5950fcea0f1822 109 Gene3D G3DSA:3.30.70.20 2 103 3.4E-29 T 12-10-2018 Acife_0067 1d696d41871e22cb5c5950fcea0f1822 109 Pfam PF11953 Domain of unknown function (DUF3470) 67 105 2.6E-13 T 12-10-2018 IPR022569 Ferredoxin, C-terminal Acife_0067 1d696d41871e22cb5c5950fcea0f1822 109 Pfam PF00037 4Fe-4S binding domain 34 56 3.7E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_0067 1d696d41871e22cb5c5950fcea0f1822 109 PRINTS PR00354 7Fe ferredoxin signature 35 52 4.3E-15 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Acife_0067 1d696d41871e22cb5c5950fcea0f1822 109 PRINTS PR00354 7Fe ferredoxin signature 9 19 4.3E-15 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Acife_0067 1d696d41871e22cb5c5950fcea0f1822 109 PRINTS PR00354 7Fe ferredoxin signature 19 29 4.3E-15 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Acife_0067 1d696d41871e22cb5c5950fcea0f1822 109 SUPERFAMILY SSF54862 3 100 9.9E-23 T 12-10-2018 Acife_0067 1d696d41871e22cb5c5950fcea0f1822 109 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_0640 5dcb94dad165c5cdb1938c4f4d7e6bc9 173 SUPERFAMILY SSF55021 90 169 5.5E-12 T 12-10-2018 Acife_0640 5dcb94dad165c5cdb1938c4f4d7e6bc9 173 SUPERFAMILY SSF55021 4 79 1.21E-13 T 12-10-2018 Acife_0640 5dcb94dad165c5cdb1938c4f4d7e6bc9 173 Gene3D G3DSA:3.30.70.260 1 79 5.7E-17 T 12-10-2018 Acife_0640 5dcb94dad165c5cdb1938c4f4d7e6bc9 173 Gene3D G3DSA:3.30.70.260 89 169 9.2E-12 T 12-10-2018 Acife_0640 5dcb94dad165c5cdb1938c4f4d7e6bc9 173 Pfam PF13740 ACT domain 92 165 6.3E-7 T 12-10-2018 Acife_0640 5dcb94dad165c5cdb1938c4f4d7e6bc9 173 Pfam PF13740 ACT domain 4 74 4.5E-12 T 12-10-2018 Acife_0499 a762e677e2b1766a7c5a1cf95f7ac372 478 SUPERFAMILY SSF111369 133 334 2.88E-20 T 12-10-2018 Acife_0499 a762e677e2b1766a7c5a1cf95f7ac372 478 Gene3D G3DSA:2.40.50.100 135 169 2.0E-13 T 12-10-2018 Acife_0499 a762e677e2b1766a7c5a1cf95f7ac372 478 Gene3D G3DSA:2.40.50.100 215 256 2.1E-49 T 12-10-2018 Acife_0499 a762e677e2b1766a7c5a1cf95f7ac372 478 Gene3D G3DSA:1.10.287.470 194 214 2.1E-49 T 12-10-2018 Acife_0499 a762e677e2b1766a7c5a1cf95f7ac372 478 Gene3D G3DSA:1.10.287.470 170 185 2.0E-13 T 12-10-2018 Acife_0499 a762e677e2b1766a7c5a1cf95f7ac372 478 Gene3D G3DSA:2.40.30.170 257 336 2.1E-49 T 12-10-2018 Acife_0499 a762e677e2b1766a7c5a1cf95f7ac372 478 Gene3D G3DSA:2.40.30.170 121 134 2.0E-13 T 12-10-2018 Acife_0499 a762e677e2b1766a7c5a1cf95f7ac372 478 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 213 400 2.5E-35 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Acife_0499 a762e677e2b1766a7c5a1cf95f7ac372 478 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 118 329 3.8E-78 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_0499 a762e677e2b1766a7c5a1cf95f7ac372 478 Gene3D G3DSA:2.40.420.20 337 395 2.1E-49 T 12-10-2018 Acife_0499 a762e677e2b1766a7c5a1cf95f7ac372 478 Gene3D G3DSA:2.40.420.20 110 120 2.0E-13 T 12-10-2018 Acife_0636 d502882ed1da9c59bb2946f40fa3ed12 182 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 176 28.07 T 12-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 Acife_0636 d502882ed1da9c59bb2946f40fa3ed12 182 Gene3D G3DSA:2.60.120.10 1 171 5.8E-46 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_0636 d502882ed1da9c59bb2946f40fa3ed12 182 SUPERFAMILY SSF51182 12 174 1.72E-29 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Acife_0636 d502882ed1da9c59bb2946f40fa3ed12 182 Pfam PF03079 ARD/ARD' family 67 169 1.1E-22 T 12-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Acife_3074 2f794385bbc9667493b98be01287dffd 89 SUPERFAMILY SSF46955 32 83 1.21E-6 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Acife_3074 2f794385bbc9667493b98be01287dffd 89 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 30 80 9.5E-23 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA Acife_3174 fbf073e0a64216446f69e0bfbc2efe16 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 270 1.0E-33 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Acife_3174 fbf073e0a64216446f69e0bfbc2efe16 286 SUPERFAMILY SSF53850 12 270 4.63E-37 T 12-10-2018 Acife_3174 fbf073e0a64216446f69e0bfbc2efe16 286 SMART SM00062 43 274 2.9E-21 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Acife_3174 fbf073e0a64216446f69e0bfbc2efe16 286 Gene3D G3DSA:3.40.190.10 52 270 2.7E-38 T 12-10-2018 Acife_3174 fbf073e0a64216446f69e0bfbc2efe16 286 Gene3D G3DSA:3.40.190.10 132 231 2.7E-38 T 12-10-2018 Acife_0382 066f04da47349752ab92c0bb61f6033c 398 Gene3D G3DSA:1.20.1250.20 10 198 9.1E-17 T 12-10-2018 Acife_0382 066f04da47349752ab92c0bb61f6033c 398 SUPERFAMILY SSF103473 17 393 7.32E-36 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_0382 066f04da47349752ab92c0bb61f6033c 398 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 25 385 3.0E-58 T 12-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB Acife_0382 066f04da47349752ab92c0bb61f6033c 398 Gene3D G3DSA:1.20.1250.20 214 395 2.0E-9 T 12-10-2018 Acife_0095 5e9c88fd774984076cf2f44fb190e4b1 304 Pfam PF13098 Thioredoxin-like domain 141 259 1.5E-12 T 12-10-2018 IPR012336 Thioredoxin-like fold Acife_0095 5e9c88fd774984076cf2f44fb190e4b1 304 SUPERFAMILY SSF52833 141 258 3.31E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0095 5e9c88fd774984076cf2f44fb190e4b1 304 Gene3D G3DSA:3.40.30.10 141 278 7.6E-27 T 12-10-2018 Acife_3111 8d57f86dc698eab98f49dc172e1c6524 219 Pfam PF04299 Putative FMN-binding domain 1 168 1.7E-59 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type Acife_3111 8d57f86dc698eab98f49dc172e1c6524 219 SUPERFAMILY SSF50475 9 194 2.92E-34 T 12-10-2018 Acife_3111 8d57f86dc698eab98f49dc172e1c6524 219 Gene3D G3DSA:2.30.110.10 1 209 3.1E-68 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Acife_3111 8d57f86dc698eab98f49dc172e1c6524 219 PIRSF PIRSF010372 1 212 8.6E-66 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type Acife_1768 f87f6e8d47cf06c4cfbd3796a06990ec 321 Gene3D G3DSA:3.30.70.1400 15 102 1.9E-26 T 12-10-2018 Acife_1768 f87f6e8d47cf06c4cfbd3796a06990ec 321 PIRSF PIRSF006487 6 307 1.9E-14 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Acife_1768 f87f6e8d47cf06c4cfbd3796a06990ec 321 Pfam PF01571 Aminomethyltransferase folate-binding domain 14 176 1.4E-13 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Acife_1768 f87f6e8d47cf06c4cfbd3796a06990ec 321 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 219 287 2.2E-4 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Acife_1768 f87f6e8d47cf06c4cfbd3796a06990ec 321 Gene3D G3DSA:3.30.70.1630 14 184 1.9E-26 T 12-10-2018 Acife_1768 f87f6e8d47cf06c4cfbd3796a06990ec 321 Gene3D G3DSA:2.40.30.160 189 301 8.0E-29 T 12-10-2018 Acife_1768 f87f6e8d47cf06c4cfbd3796a06990ec 321 SUPERFAMILY SSF103025 13 235 3.92E-53 T 12-10-2018 Acife_1768 f87f6e8d47cf06c4cfbd3796a06990ec 321 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 179 244 9.7E-25 T 12-10-2018 IPR017703 YgfZ/GcvT conserved site Acife_2268 08bdbe170cdd62cc2e132606698db93a 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 46 54 2.7E-19 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_2268 08bdbe170cdd62cc2e132606698db93a 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 94 109 2.7E-19 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_2268 08bdbe170cdd62cc2e132606698db93a 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 130 146 2.7E-19 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_2268 08bdbe170cdd62cc2e132606698db93a 152 TIGRFAM TIGR00077 lspA: signal peptidase II 4 149 1.4E-35 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_2268 08bdbe170cdd62cc2e132606698db93a 152 ProSitePatterns PS00855 Signal peptidases II signature. 97 109 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_2268 08bdbe170cdd62cc2e132606698db93a 152 Pfam PF01252 Signal peptidase (SPase) II 9 149 2.8E-38 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_2268 08bdbe170cdd62cc2e132606698db93a 152 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 152 16.43 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Acife_0033 ab8c4b76b593467c2f8e39ce32a44ca2 119 SMART SM00905 4 114 1.4E-42 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Acife_0033 ab8c4b76b593467c2f8e39ce32a44ca2 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 4.8E-32 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Acife_0033 ab8c4b76b593467c2f8e39ce32a44ca2 119 Gene3D G3DSA:3.30.1130.10 1 118 1.3E-39 T 12-10-2018 Acife_0033 ab8c4b76b593467c2f8e39ce32a44ca2 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 7.1E-31 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Acife_0033 ab8c4b76b593467c2f8e39ce32a44ca2 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 5.7E-26 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Acife_0033 ab8c4b76b593467c2f8e39ce32a44ca2 119 SUPERFAMILY SSF55620 1 115 8.15E-35 T 12-10-2018 Acife_2596 b7c53e79300f374586095361c5e86449 711 SUPERFAMILY SSF81442 54 576 1.7E-153 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 449 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 167 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 116 139 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 58 83 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 343 358 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 402 420 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 235 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 479 500 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 197 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 246 265 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 367 388 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 318 1.5E-76 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 299 353 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 Gene3D G3DSA:1.20.210.10 41 585 2.8E-164 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2596 b7c53e79300f374586095361c5e86449 711 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 67 520 9.0E-120 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0988 90a2add7812784dbd1d568aa406efeee 349 SUPERFAMILY SSF53807 80 339 4.22E-53 T 12-10-2018 Acife_0988 90a2add7812784dbd1d568aa406efeee 349 Pfam PF01297 Zinc-uptake complex component A periplasmic 86 338 5.7E-39 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Acife_0988 90a2add7812784dbd1d568aa406efeee 349 Gene3D G3DSA:3.40.50.1980 79 223 1.5E-29 T 12-10-2018 Acife_1190 27acda9b4b3178a8e4036af49f360277 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 65 5.7E-6 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Acife_1190 27acda9b4b3178a8e4036af49f360277 81 SUPERFAMILY SSF143120 5 44 6.8E-6 T 12-10-2018 IPR036165 YefM-like superfamily Acife_1808 c4e9b9da13d12d278cfe26cfd8cf6ad9 96 Gene3D G3DSA:3.30.460.10 4 96 9.6E-22 T 12-10-2018 Acife_1808 c4e9b9da13d12d278cfe26cfd8cf6ad9 96 SUPERFAMILY SSF81301 6 93 3.05E-21 T 12-10-2018 Acife_1808 c4e9b9da13d12d278cfe26cfd8cf6ad9 96 Pfam PF01909 Nucleotidyltransferase domain 13 89 7.0E-13 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Acife_2932 db6d9c747906e64078d966f825f76832 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.9E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_2932 db6d9c747906e64078d966f825f76832 67 Gene3D G3DSA:2.40.50.140 1 67 5.2E-30 T 12-10-2018 Acife_2932 db6d9c747906e64078d966f825f76832 67 PRINTS PR00050 Cold shock protein signature 40 58 3.9E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_2932 db6d9c747906e64078d966f825f76832 67 PRINTS PR00050 Cold shock protein signature 25 34 3.9E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_2932 db6d9c747906e64078d966f825f76832 67 PRINTS PR00050 Cold shock protein signature 4 19 3.9E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_2932 db6d9c747906e64078d966f825f76832 67 SUPERFAMILY SSF50249 1 65 1.29E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_2932 db6d9c747906e64078d966f825f76832 67 PIRSF PIRSF002599 1 67 4.4E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 Acife_2932 db6d9c747906e64078d966f825f76832 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 12-10-2018 IPR019844 Cold-shock conserved site Acife_2932 db6d9c747906e64078d966f825f76832 67 SMART SM00357 3 67 5.1E-29 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Acife_2425 2372f4d19d00ac1aa1561a6198eeb137 249 Gene3D G3DSA:3.40.50.720 1 248 2.5E-71 T 12-10-2018 Acife_2425 2372f4d19d00ac1aa1561a6198eeb137 249 Pfam PF00899 ThiF family 12 241 1.9E-35 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Acife_2425 2372f4d19d00ac1aa1561a6198eeb137 249 SUPERFAMILY SSF69572 6 244 1.19E-52 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Acife_0956 0d8e5e0c2520105e32fbde1a845ae8c9 202 Gene3D G3DSA:3.40.470.10 8 200 6.5E-68 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Acife_0956 0d8e5e0c2520105e32fbde1a845ae8c9 202 SUPERFAMILY SSF52141 11 198 3.6E-51 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Acife_0956 0d8e5e0c2520105e32fbde1a845ae8c9 202 SMART SM00987 35 191 1.6E-27 T 12-10-2018 Acife_0956 0d8e5e0c2520105e32fbde1a845ae8c9 202 Pfam PF03167 Uracil DNA glycosylase superfamily 39 187 3.2E-22 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Acife_0956 0d8e5e0c2520105e32fbde1a845ae8c9 202 SMART SM00986 35 191 1.6E-27 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Acife_0031 9e66438e81013de9ebc2780c28137e21 129 Gene3D G3DSA:3.30.300.130 56 129 2.7E-18 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Acife_0031 9e66438e81013de9ebc2780c28137e21 129 SUPERFAMILY SSF117916 57 125 6.32E-14 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Acife_0031 9e66438e81013de9ebc2780c28137e21 129 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 69 128 2.0E-8 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Acife_0031 9e66438e81013de9ebc2780c28137e21 129 Pfam PF01106 NifU-like domain 62 124 3.4E-17 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Acife_1274 5ae9317926e27d59de66a66ecb588446 476 TIGRFAM TIGR03471 HpnJ: hopanoid biosynthesis associated radical SAM protein HpnJ 3 475 2.2E-262 T 12-10-2018 IPR017834 Hopanoid biosynthesis associated radical SAM protein HpnJ Acife_1274 5ae9317926e27d59de66a66ecb588446 476 Pfam PF04055 Radical SAM superfamily 205 364 5.6E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_1274 5ae9317926e27d59de66a66ecb588446 476 Gene3D G3DSA:3.80.30.20 199 406 5.8E-27 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Acife_1274 5ae9317926e27d59de66a66ecb588446 476 SMART SM00729 199 407 3.1E-30 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Acife_1274 5ae9317926e27d59de66a66ecb588446 476 SUPERFAMILY SSF102114 163 411 7.32E-49 T 12-10-2018 Acife_1168 4af401c199a458eab957439f3f598f8c 349 Pfam PF00534 Glycosyl transferases group 1 163 324 1.6E-28 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_1168 4af401c199a458eab957439f3f598f8c 349 SUPERFAMILY SSF53756 15 346 1.66E-63 T 12-10-2018 Acife_1168 4af401c199a458eab957439f3f598f8c 349 Gene3D G3DSA:3.40.50.2000 80 341 6.1E-55 T 12-10-2018 Acife_1168 4af401c199a458eab957439f3f598f8c 349 Pfam PF13439 Glycosyltransferase Family 4 81 149 8.4E-9 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Acife_1168 4af401c199a458eab957439f3f598f8c 349 Gene3D G3DSA:3.40.50.2000 147 327 6.1E-55 T 12-10-2018 Acife_1770 0c75bd64b0c222bcff1dfbe0d16e6e1b 379 SMART SM00897 35 219 3.7E-28 T 12-10-2018 IPR013702 FIST domain, N-terminal Acife_1770 0c75bd64b0c222bcff1dfbe0d16e6e1b 379 SMART SM01204 220 361 1.1E-34 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Acife_1770 0c75bd64b0c222bcff1dfbe0d16e6e1b 379 Pfam PF10442 FIST C domain 220 360 1.7E-28 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Acife_1770 0c75bd64b0c222bcff1dfbe0d16e6e1b 379 PIRSF PIRSF018953 12 379 3.3E-54 T 12-10-2018 IPR016741 Uncharacterised conserved protein UCP018953 Acife_1770 0c75bd64b0c222bcff1dfbe0d16e6e1b 379 Pfam PF08495 FIST N domain 37 218 8.7E-24 T 12-10-2018 IPR013702 FIST domain, N-terminal Acife_2418 440e7cb35992b72cc182ce7159cef5ae 360 Gene3D G3DSA:2.40.50.100 64 204 1.4E-64 T 12-10-2018 Acife_2418 440e7cb35992b72cc182ce7159cef5ae 360 SUPERFAMILY SSF111369 54 278 2.09E-28 T 12-10-2018 Acife_2418 440e7cb35992b72cc182ce7159cef5ae 360 Gene3D G3DSA:2.40.420.20 41 339 1.4E-64 T 12-10-2018 Acife_2418 440e7cb35992b72cc182ce7159cef5ae 360 Gene3D G3DSA:2.40.30.170 52 280 1.4E-64 T 12-10-2018 Acife_2418 440e7cb35992b72cc182ce7159cef5ae 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 263 1.0E-15 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_2418 440e7cb35992b72cc182ce7159cef5ae 360 Gene3D G3DSA:1.10.287.470 98 168 1.4E-64 T 12-10-2018 Acife_2418 440e7cb35992b72cc182ce7159cef5ae 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 353 7.6E-67 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Acife_3274 1a5a1180e57e109a7f012682244fc558 169 SUPERFAMILY SSF55718 28 127 2.06E-14 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Acife_3274 1a5a1180e57e109a7f012682244fc558 169 Pfam PF02036 SCP-2 sterol transfer family 33 121 5.6E-13 T 12-10-2018 IPR003033 SCP2 sterol-binding domain Acife_3274 1a5a1180e57e109a7f012682244fc558 169 Gene3D G3DSA:3.30.1050.10 31 128 1.4E-5 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Acife_1248 80ffdbac5889b71814d6da9db4be546e 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 222 243 1.7E-9 T 12-10-2018 Acife_1248 80ffdbac5889b71814d6da9db4be546e 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 80 105 1.7E-9 T 12-10-2018 Acife_1248 80ffdbac5889b71814d6da9db4be546e 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 439 458 1.7E-9 T 12-10-2018 Acife_1248 80ffdbac5889b71814d6da9db4be546e 660 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 314 326 1.7E-9 T 12-10-2018 Acife_1248 80ffdbac5889b71814d6da9db4be546e 660 Pfam PF00361 Proton-conducting membrane transporter 133 418 3.0E-53 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2376 636cdd484d56b1980673ea82b5e28a91 835 TIGRFAM TIGR02687 TIGR02687: TIGR02687 family protein 5 818 3.6E-275 T 12-10-2018 IPR014060 Conserved hypothetical protein CHP02687 Acife_2376 636cdd484d56b1980673ea82b5e28a91 835 Pfam PF08665 PglZ domain 443 618 2.2E-59 T 12-10-2018 IPR013973 PglZ domain Acife_2376 636cdd484d56b1980673ea82b5e28a91 835 SUPERFAMILY SSF53649 549 646 1.36E-6 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Acife_2376 636cdd484d56b1980673ea82b5e28a91 835 Gene3D G3DSA:3.40.720.10 441 653 2.1E-5 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Acife_1281 82bb114529279d31a61fd821f4779b46 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.3E-16 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Acife_1281 82bb114529279d31a61fd821f4779b46 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.48 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Acife_1281 82bb114529279d31a61fd821f4779b46 95 Gene3D G3DSA:1.10.20.60 1 93 4.3E-21 T 12-10-2018 Acife_1281 82bb114529279d31a61fd821f4779b46 95 SUPERFAMILY SSF141000 3 93 2.48E-25 T 12-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Acife_1281 82bb114529279d31a61fd821f4779b46 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 1.6E-24 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Acife_0947 6d83d262448a1ce33a7689a82273129c 166 Pfam PF01527 Transposase 61 135 4.4E-6 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Acife_0947 6d83d262448a1ce33a7689a82273129c 166 Pfam PF01527 Transposase 2 55 6.9E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Acife_0947 6d83d262448a1ce33a7689a82273129c 166 SUPERFAMILY SSF46689 1 52 1.11E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_1270 0b9d016b2bfef044233695e1b0376e32 643 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 23 636 9.3E-185 T 12-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 Acife_1270 0b9d016b2bfef044233695e1b0376e32 643 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 23 310 1.9E-114 T 12-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 Acife_1270 0b9d016b2bfef044233695e1b0376e32 643 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 21 637 4.9E-238 T 12-10-2018 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072 Acife_1270 0b9d016b2bfef044233695e1b0376e32 643 Gene3D G3DSA:1.50.10.20 26 634 1.7E-215 T 12-10-2018 Acife_1270 0b9d016b2bfef044233695e1b0376e32 643 Gene3D G3DSA:1.50.10.20 44 319 1.7E-215 T 12-10-2018 Acife_1270 0b9d016b2bfef044233695e1b0376e32 643 SUPERFAMILY SSF48239 48 312 3.03E-69 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Acife_1270 0b9d016b2bfef044233695e1b0376e32 643 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 320 636 1.9E-136 T 12-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 Acife_1270 0b9d016b2bfef044233695e1b0376e32 643 SUPERFAMILY SSF48239 300 636 2.59E-91 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Acife_1425 511c51954f500ff7f8cc802016db8c8d 400 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 22 375 28.291 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Acife_1425 511c51954f500ff7f8cc802016db8c8d 400 Pfam PF13393 Histidyl-tRNA synthetase 15 325 1.1E-102 T 12-10-2018 Acife_1425 511c51954f500ff7f8cc802016db8c8d 400 SUPERFAMILY SSF55681 10 327 6.4E-49 T 12-10-2018 Acife_1425 511c51954f500ff7f8cc802016db8c8d 400 Gene3D G3DSA:3.30.930.10 9 337 4.4E-62 T 12-10-2018 Acife_1425 511c51954f500ff7f8cc802016db8c8d 400 PIRSF PIRSF001549 10 379 5.4E-42 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Acife_0977 4c061e1129c9211a4b4c277b2df0fe8b 720 Pfam PF00270 DEAD/DEAH box helicase 207 354 6.0E-12 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Acife_0977 4c061e1129c9211a4b4c277b2df0fe8b 720 SUPERFAMILY SSF52540 187 366 1.29E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0977 4c061e1129c9211a4b4c277b2df0fe8b 720 Pfam PF11331 Probable zinc-ribbon domain 422 460 1.5E-5 T 12-10-2018 IPR021480 Probable zinc-ribbon domain, plant Acife_0977 4c061e1129c9211a4b4c277b2df0fe8b 720 SUPERFAMILY SSF52540 452 602 7.86E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0977 4c061e1129c9211a4b4c277b2df0fe8b 720 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 719 23.548 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Acife_0977 4c061e1129c9211a4b4c277b2df0fe8b 720 SMART SM00490 484 581 0.0056 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_0977 4c061e1129c9211a4b4c277b2df0fe8b 720 SMART SM00487 187 384 7.9E-16 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_0977 4c061e1129c9211a4b4c277b2df0fe8b 720 Gene3D G3DSA:1.10.8.630 7 113 1.1E-28 T 12-10-2018 Acife_0977 4c061e1129c9211a4b4c277b2df0fe8b 720 TIGRFAM TIGR00595 priA: primosomal protein N' 212 717 3.8E-180 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Acife_0977 4c061e1129c9211a4b4c277b2df0fe8b 720 Gene3D G3DSA:3.40.50.300 182 367 6.6E-72 T 12-10-2018 Acife_2077 eb0cd38f90772fddb31803887be3fe70 106 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 100 1.4E-28 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Acife_2077 eb0cd38f90772fddb31803887be3fe70 106 SUPERFAMILY SSF50022 1 103 4.84E-34 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_2077 eb0cd38f90772fddb31803887be3fe70 106 Pfam PF13806 Rieske-like [2Fe-2S] domain 2 99 4.6E-17 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Acife_2077 eb0cd38f90772fddb31803887be3fe70 106 Gene3D G3DSA:2.102.10.10 3 106 8.7E-29 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_2461 e31024f684a3402f7e1580cf442e39c4 335 SUPERFAMILY SSF55681 2 243 1.49E-32 T 12-10-2018 Acife_2461 e31024f684a3402f7e1580cf442e39c4 335 Gene3D G3DSA:3.30.930.10 13 243 2.8E-26 T 12-10-2018 Acife_2329 52ba296928d5ab722b47c7cdd34d5f07 340 SUPERFAMILY SSF53098 129 298 5.82E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_2329 52ba296928d5ab722b47c7cdd34d5f07 340 Pfam PF13565 Homeodomain-like domain 27 102 2.7E-10 T 12-10-2018 Acife_2329 52ba296928d5ab722b47c7cdd34d5f07 340 Pfam PF00665 Integrase core domain 129 244 5.3E-22 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_2329 52ba296928d5ab722b47c7cdd34d5f07 340 Gene3D G3DSA:3.30.420.10 125 295 2.4E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_2329 52ba296928d5ab722b47c7cdd34d5f07 340 SUPERFAMILY SSF46689 5 106 2.6E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_3096 d1a3680dffa4f33e27bf5ccc73b1889c 407 SUPERFAMILY SSF103473 7 401 8.24E-34 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_3096 d1a3680dffa4f33e27bf5ccc73b1889c 407 Gene3D G3DSA:1.20.1250.20 6 208 4.2E-13 T 12-10-2018 Acife_3096 d1a3680dffa4f33e27bf5ccc73b1889c 407 Gene3D G3DSA:1.20.1250.20 219 406 1.6E-11 T 12-10-2018 Acife_3096 d1a3680dffa4f33e27bf5ccc73b1889c 407 Pfam PF07690 Major Facilitator Superfamily 23 365 3.1E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_2189 25c4f497a8f35cf70c5ec293b72a8731 345 Pfam PF02547 Queuosine biosynthesis protein 4 338 2.5E-129 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Acife_2189 25c4f497a8f35cf70c5ec293b72a8731 345 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 339 45.32 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Acife_2189 25c4f497a8f35cf70c5ec293b72a8731 345 SUPERFAMILY SSF111337 1 338 5.1E-129 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Acife_2189 25c4f497a8f35cf70c5ec293b72a8731 345 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 338 1.2E-125 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Acife_2189 25c4f497a8f35cf70c5ec293b72a8731 345 Gene3D G3DSA:3.40.1780.10 14 338 2.2E-115 T 12-10-2018 Acife_2189 25c4f497a8f35cf70c5ec293b72a8731 345 Gene3D G3DSA:2.40.10.240 64 161 2.2E-115 T 12-10-2018 Acife_1633 f0560feb4a5a46a2f7984be4171b6732 269 Gene3D G3DSA:1.10.3130.10 2 81 2.4E-22 T 12-10-2018 Acife_1633 f0560feb4a5a46a2f7984be4171b6732 269 Pfam PF06426 Serine acetyltransferase, N-terminal 14 50 3.2E-4 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Acife_1633 f0560feb4a5a46a2f7984be4171b6732 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 123 3.5E-5 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_1633 f0560feb4a5a46a2f7984be4171b6732 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 166 3.1E-6 T 12-10-2018 IPR001451 Hexapeptide repeat Acife_1633 f0560feb4a5a46a2f7984be4171b6732 269 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 141 169 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Acife_1633 f0560feb4a5a46a2f7984be4171b6732 269 Gene3D G3DSA:2.160.10.10 82 199 2.2E-34 T 12-10-2018 Acife_1633 f0560feb4a5a46a2f7984be4171b6732 269 SUPERFAMILY SSF51161 17 183 2.23E-54 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Acife_1633 f0560feb4a5a46a2f7984be4171b6732 269 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 21 181 8.0E-74 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Acife_0954 e7f2bc36606dc178b3d11f5c35cb1874 93 Gene3D G3DSA:1.20.5.780 4 89 8.0E-25 T 12-10-2018 Acife_0954 e7f2bc36606dc178b3d11f5c35cb1874 93 SUPERFAMILY SSF47598 6 83 6.35E-22 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_0954 e7f2bc36606dc178b3d11f5c35cb1874 93 Pfam PF08681 Protein of unknown function (DUF1778) 9 86 5.9E-26 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Acife_2955 83a814d778a3d69aeab7493cd5b26735 322 Gene3D G3DSA:3.30.420.40 3 166 2.9E-8 T 12-10-2018 Acife_2955 83a814d778a3d69aeab7493cd5b26735 322 SUPERFAMILY SSF53067 164 311 2.46E-14 T 12-10-2018 Acife_2955 83a814d778a3d69aeab7493cd5b26735 322 Gene3D G3DSA:3.30.420.40 167 294 1.4E-20 T 12-10-2018 Acife_2955 83a814d778a3d69aeab7493cd5b26735 322 SUPERFAMILY SSF53067 1 152 7.12E-13 T 12-10-2018 Acife_0675 0a1947becea80cbe69a8061957f8a1dc 1078 Pfam PF04851 Type III restriction enzyme, res subunit 274 429 1.4E-17 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Acife_0675 0a1947becea80cbe69a8061957f8a1dc 1078 SUPERFAMILY SSF52540 230 464 7.44E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0675 0a1947becea80cbe69a8061957f8a1dc 1078 Gene3D G3DSA:3.90.1570.50 76 259 5.0E-22 T 12-10-2018 Acife_0675 0a1947becea80cbe69a8061957f8a1dc 1078 Pfam PF11867 Domain of unknown function (DUF3387) 734 1033 4.7E-24 T 12-10-2018 IPR021810 Protein of unknown function DUF3387 Acife_0675 0a1947becea80cbe69a8061957f8a1dc 1078 Gene3D G3DSA:3.40.50.300 265 448 9.7E-48 T 12-10-2018 Acife_0675 0a1947becea80cbe69a8061957f8a1dc 1078 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 9 725 1.1E-144 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 Acife_0675 0a1947becea80cbe69a8061957f8a1dc 1078 SMART SM00487 262 463 0.0062 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_0675 0a1947becea80cbe69a8061957f8a1dc 1078 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 2 211 3.8E-31 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Acife_1432 98a3443b570bf7caae0328b857787fd9 221 Gene3D G3DSA:3.40.50.170 2 209 1.8E-77 T 12-10-2018 Acife_1432 98a3443b570bf7caae0328b857787fd9 221 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 190 31.057 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Acife_1432 98a3443b570bf7caae0328b857787fd9 221 Pfam PF00551 Formyl transferase 3 184 3.8E-58 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Acife_1432 98a3443b570bf7caae0328b857787fd9 221 SUPERFAMILY SSF53328 3 200 4.97E-63 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Acife_1432 98a3443b570bf7caae0328b857787fd9 221 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 5.2E-71 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Acife_1432 98a3443b570bf7caae0328b857787fd9 221 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Acife_1362 1f2d41e87edd9f1c01ff597b99bae91e 100 Pfam PF06155 Protein of unknown function (DUF971) 17 95 7.3E-30 T 12-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 Acife_1362 1f2d41e87edd9f1c01ff597b99bae91e 100 Gene3D G3DSA:3.30.2020.30 1 100 3.1E-38 T 12-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 Acife_0562 075fa3bfe8193f2ba92e283b24f8d225 179 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 10 179 9.9E-82 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Acife_0562 075fa3bfe8193f2ba92e283b24f8d225 179 Pfam PF00227 Proteasome subunit 8 177 6.8E-23 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Acife_0562 075fa3bfe8193f2ba92e283b24f8d225 179 SUPERFAMILY SSF56235 6 178 1.22E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Acife_0562 075fa3bfe8193f2ba92e283b24f8d225 179 PIRSF PIRSF039093 3 179 1.9E-83 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Acife_0562 075fa3bfe8193f2ba92e283b24f8d225 179 Gene3D G3DSA:3.60.20.10 5 179 2.3E-66 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Acife_0562 075fa3bfe8193f2ba92e283b24f8d225 179 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 9 179 39.586 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Acife_1684 2696ebe76cf2f1c6d3de6933e222d7dc 142 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 138 11.409 T 12-10-2018 IPR022907 VapC family GO:0004540 Acife_1684 2696ebe76cf2f1c6d3de6933e222d7dc 142 TIGRFAM TIGR00028 Mtu_PIN_fam: toxin-antitoxin system PIN domain toxin 1 127 3.1E-30 T 12-10-2018 IPR006226 PIN domain toxin GO:0016788 Acife_1684 2696ebe76cf2f1c6d3de6933e222d7dc 142 SUPERFAMILY SSF88723 1 128 3.92E-13 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_2310 01357ec9796e1e01248eb50f03670825 342 Gene3D G3DSA:3.20.20.70 6 161 2.3E-11 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2310 01357ec9796e1e01248eb50f03670825 342 SUPERFAMILY SSF102114 2 110 2.75E-12 T 12-10-2018 Acife_2575 3386be51095632e220129186aa83a1bd 678 Pfam PF09299 Mu transposase, C-terminal 460 519 9.4E-5 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal Acife_2575 3386be51095632e220129186aa83a1bd 678 SUPERFAMILY SSF53098 250 441 5.69E-20 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_2575 3386be51095632e220129186aa83a1bd 678 Pfam PF00665 Integrase core domain 252 378 1.4E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_2575 3386be51095632e220129186aa83a1bd 678 Gene3D G3DSA:3.30.420.10 246 449 2.1E-33 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_1386 856ae65dcb5bddee4b6db6bf7bec737f 350 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 8 333 1.3E-135 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Acife_1386 856ae65dcb5bddee4b6db6bf7bec737f 350 Gene3D G3DSA:3.40.50.10470 151 345 1.8E-67 T 12-10-2018 Acife_1386 856ae65dcb5bddee4b6db6bf7bec737f 350 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 35 333 2.9E-115 T 12-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Acife_1386 856ae65dcb5bddee4b6db6bf7bec737f 350 Pfam PF01008 Initiation factor 2 subunit family 49 334 9.6E-82 T 12-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 Acife_1386 856ae65dcb5bddee4b6db6bf7bec737f 350 Gene3D G3DSA:1.20.120.420 3 145 1.5E-43 T 12-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Acife_1386 856ae65dcb5bddee4b6db6bf7bec737f 350 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 6 344 40.358 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Acife_1386 856ae65dcb5bddee4b6db6bf7bec737f 350 SUPERFAMILY SSF100950 5 336 1.17E-119 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Acife_1486 37652a5188afc9f6c95ad2ddcb1b3b34 181 SUPERFAMILY SSF52218 1 161 6.29E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Acife_1486 37652a5188afc9f6c95ad2ddcb1b3b34 181 Pfam PF03358 NADPH-dependent FMN reductase 1 136 1.8E-25 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Acife_1486 37652a5188afc9f6c95ad2ddcb1b3b34 181 Gene3D G3DSA:3.40.50.360 1 181 7.6E-38 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Acife_1560 65f671bee31577f02ffcbe599b77b628 243 Pfam PF13671 AAA domain 82 225 2.7E-9 T 12-10-2018 Acife_1560 65f671bee31577f02ffcbe599b77b628 243 Gene3D G3DSA:3.40.50.300 80 230 1.9E-18 T 12-10-2018 Acife_1560 65f671bee31577f02ffcbe599b77b628 243 SUPERFAMILY SSF52540 78 234 2.44E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1971 8cd288f3e5aa13540c6082533c57873c 387 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 260 345 3.3E-8 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Acife_1971 8cd288f3e5aa13540c6082533c57873c 387 Pfam PF12323 Helix-turn-helix domain 1 42 2.6E-15 T 12-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain Acife_1971 8cd288f3e5aa13540c6082533c57873c 387 Pfam PF01385 Probable transposase 202 289 1.9E-12 T 12-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Acife_0933 d6ef053fde8e38689b9465bae173f350 219 Pfam PF04028 Domain of unknown function (DUF374) 57 122 9.8E-25 T 12-10-2018 IPR007172 Domain of unknown function DUF374 Acife_0933 d6ef053fde8e38689b9465bae173f350 219 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 35 122 7.0E-14 T 12-10-2018 IPR007172 Domain of unknown function DUF374 Acife_1187 b0c10b888e45aef4854e5ef5cce25b12 112 SUPERFAMILY SSF50118 4 111 1.2E-28 T 12-10-2018 Acife_1187 b0c10b888e45aef4854e5ef5cce25b12 112 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 110 7.9E-22 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Acife_1187 b0c10b888e45aef4854e5ef5cce25b12 112 Gene3D G3DSA:2.30.30.110 5 112 2.0E-36 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Acife_2866 8f66f2b7ad815b6f86b9c1a5874aa487 257 SUPERFAMILY SSF56219 2 254 1.01E-78 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Acife_2866 8f66f2b7ad815b6f86b9c1a5874aa487 257 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Acife_2866 8f66f2b7ad815b6f86b9c1a5874aa487 257 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 210 221 - T 12-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 Acife_2866 8f66f2b7ad815b6f86b9c1a5874aa487 257 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 253 5.3E-78 T 12-10-2018 Acife_2866 8f66f2b7ad815b6f86b9c1a5874aa487 257 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 246 9.5E-23 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Acife_2866 8f66f2b7ad815b6f86b9c1a5874aa487 257 Gene3D G3DSA:3.60.10.10 1 254 3.8E-75 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Acife_2866 8f66f2b7ad815b6f86b9c1a5874aa487 257 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 8.2E-77 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Acife_2478 ded91f8d84bf84a70583f4852835fb98 76 Pfam PF01206 Sulfurtransferase TusA 6 75 1.7E-22 T 12-10-2018 IPR001455 TusA-like domain Acife_2478 ded91f8d84bf84a70583f4852835fb98 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 8 32 - T 12-10-2018 IPR001455 TusA-like domain Acife_2478 ded91f8d84bf84a70583f4852835fb98 76 Gene3D G3DSA:3.30.110.40 1 76 2.5E-28 T 12-10-2018 IPR036868 TusA-like domain superfamily Acife_2478 ded91f8d84bf84a70583f4852835fb98 76 SUPERFAMILY SSF64307 2 75 1.15E-23 T 12-10-2018 IPR036868 TusA-like domain superfamily Acife_0639 ea73f29c18397217b5c0ed60aeb92228 206 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 205 86.354 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Acife_0639 ea73f29c18397217b5c0ed60aeb92228 206 SUPERFAMILY SSF53639 2 202 2.75E-44 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Acife_0639 ea73f29c18397217b5c0ed60aeb92228 206 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 195 3.7E-40 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal Acife_0639 ea73f29c18397217b5c0ed60aeb92228 206 SMART SM01007 7 197 2.9E-45 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal Acife_0639 ea73f29c18397217b5c0ed60aeb92228 206 Gene3D G3DSA:3.40.225.10 2 206 4.8E-52 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Acife_0639 ea73f29c18397217b5c0ed60aeb92228 206 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 9 201 1.4E-62 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 Acife_0521 e70e1c36048e1a61210eac8099c87639 421 Pfam PF00149 Calcineurin-like phosphoesterase 1 195 1.3E-12 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Acife_0521 e70e1c36048e1a61210eac8099c87639 421 Gene3D G3DSA:3.60.21.10 1 241 1.8E-50 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Acife_0521 e70e1c36048e1a61210eac8099c87639 421 PIRSF PIRSF033091 1 420 2.7E-103 T 12-10-2018 IPR014576 Predicted phosphoesterase, YhaO type Acife_0521 e70e1c36048e1a61210eac8099c87639 421 SUPERFAMILY SSF56300 1 270 1.75E-54 T 12-10-2018 Acife_0074 815934598a1f5c750e273e2604359e8c 500 Pfam PF03573 outer membrane porin, OprD family 68 225 2.1E-8 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 Acife_0074 815934598a1f5c750e273e2604359e8c 500 Gene3D G3DSA:2.40.160.10 72 500 5.2E-22 T 12-10-2018 IPR023614 Porin domain superfamily Acife_0898 ee61e17d102790bc6c223dc4ca523b12 120 Pfam PF11604 Copper binding periplasmic protein CusF 50 117 2.6E-22 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF Acife_0898 ee61e17d102790bc6c223dc4ca523b12 120 Gene3D G3DSA:2.40.50.320 44 118 1.6E-19 T 12-10-2018 Acife_2827 b29c7f8567fe52cb9464aacbd3606b29 285 Gene3D G3DSA:1.10.620.20 8 232 5.2E-10 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Acife_2827 b29c7f8567fe52cb9464aacbd3606b29 285 SUPERFAMILY SSF47240 6 268 3.08E-41 T 12-10-2018 IPR009078 Ferritin-like superfamily Acife_2827 b29c7f8567fe52cb9464aacbd3606b29 285 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 64 218 1.6E-7 T 12-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF Acife_0165 a209105b71415266e5a1c2905f4b12b4 519 Gene3D G3DSA:3.40.50.150 193 479 5.3E-81 T 12-10-2018 Acife_0165 a209105b71415266e5a1c2905f4b12b4 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 195 211 4.2E-15 T 12-10-2018 Acife_0165 a209105b71415266e5a1c2905f4b12b4 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 294 306 4.2E-15 T 12-10-2018 Acife_0165 a209105b71415266e5a1c2905f4b12b4 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 219 233 4.2E-15 T 12-10-2018 Acife_0165 a209105b71415266e5a1c2905f4b12b4 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 331 355 4.2E-15 T 12-10-2018 Acife_0165 a209105b71415266e5a1c2905f4b12b4 519 SUPERFAMILY SSF53335 8 518 1.09E-133 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0165 a209105b71415266e5a1c2905f4b12b4 519 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 499 2.7E-84 T 12-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 Acife_0165 a209105b71415266e5a1c2905f4b12b4 519 Pfam PF12161 HsdM N-terminal domain 11 157 2.8E-24 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Acife_0165 a209105b71415266e5a1c2905f4b12b4 519 Pfam PF02384 N-6 DNA Methylase 171 485 1.6E-102 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Acife_0165 a209105b71415266e5a1c2905f4b12b4 519 Gene3D G3DSA:1.20.1260.30 2 189 3.9E-34 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Acife_0355 dff29c10dd268653af65e1d424f19224 187 Pfam PF00924 Mechanosensitive ion channel 70 175 4.7E-13 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Acife_0355 dff29c10dd268653af65e1d424f19224 187 Gene3D G3DSA:2.30.30.60 128 177 1.5E-5 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Acife_0355 dff29c10dd268653af65e1d424f19224 187 SUPERFAMILY SSF50182 113 177 1.47E-11 T 12-10-2018 IPR010920 LSM domain superfamily Acife_2756 f45673965c5ac234b5c1ad214cecc751 170 Pfam PF02600 Disulfide bond formation protein DsbB 9 159 1.2E-20 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 Acife_2756 f45673965c5ac234b5c1ad214cecc751 170 SUPERFAMILY SSF158442 12 160 6.28E-20 T 12-10-2018 IPR023380 DsbB-like superfamily Acife_2756 f45673965c5ac234b5c1ad214cecc751 170 Gene3D G3DSA:1.20.1550.10 3 167 2.0E-19 T 12-10-2018 IPR023380 DsbB-like superfamily Acife_0761 4f1c1ed1eb7f6216f5eb04aea11c4305 210 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 50 81 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_0761 4f1c1ed1eb7f6216f5eb04aea11c4305 210 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 200 5.0E-20 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Acife_0761 4f1c1ed1eb7f6216f5eb04aea11c4305 210 Gene3D G3DSA:1.10.10.10 125 202 9.9E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0761 4f1c1ed1eb7f6216f5eb04aea11c4305 210 SUPERFAMILY SSF88659 136 200 6.76E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Acife_0761 4f1c1ed1eb7f6216f5eb04aea11c4305 210 Pfam PF04542 Sigma-70 region 2 29 95 9.5E-12 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Acife_0761 4f1c1ed1eb7f6216f5eb04aea11c4305 210 Gene3D G3DSA:1.10.1740.10 17 91 1.4E-16 T 12-10-2018 Acife_0761 4f1c1ed1eb7f6216f5eb04aea11c4305 210 Pfam PF08281 Sigma-70, region 4 144 195 4.9E-8 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Acife_0761 4f1c1ed1eb7f6216f5eb04aea11c4305 210 SUPERFAMILY SSF88946 26 111 2.86E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Acife_0318 57d57c419edc017b0b19a996f0a48adf 312 SUPERFAMILY SSF53686 18 307 5.5E-93 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Acife_0318 57d57c419edc017b0b19a996f0a48adf 312 Gene3D G3DSA:3.40.50.1100 53 158 2.2E-105 T 12-10-2018 Acife_0318 57d57c419edc017b0b19a996f0a48adf 312 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 299 9.6E-68 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Acife_0318 57d57c419edc017b0b19a996f0a48adf 312 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 48 66 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Acife_0318 57d57c419edc017b0b19a996f0a48adf 312 TIGRFAM TIGR01136 cysKM: cysteine synthase 23 310 3.0E-118 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Acife_0318 57d57c419edc017b0b19a996f0a48adf 312 TIGRFAM TIGR01138 cysM: cysteine synthase B 22 310 2.0E-131 T 12-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Acife_0318 57d57c419edc017b0b19a996f0a48adf 312 Gene3D G3DSA:3.40.50.1100 26 306 2.2E-105 T 12-10-2018 Acife_3248 37c3e66566fcb24fb80ac9654db5811c 173 Pfam PF13508 Acetyltransferase (GNAT) domain 57 142 2.1E-9 T 12-10-2018 IPR000182 GNAT domain Acife_3248 37c3e66566fcb24fb80ac9654db5811c 173 SUPERFAMILY SSF55729 17 143 1.24E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_3248 37c3e66566fcb24fb80ac9654db5811c 173 Gene3D G3DSA:3.40.630.30 1 158 9.0E-45 T 12-10-2018 Acife_0959 1a9926ab2557796f5df5e333087913be 102 Gene3D G3DSA:3.30.1390.10 2 102 2.9E-39 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Acife_0959 1a9926ab2557796f5df5e333087913be 102 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 20 97 2.1E-31 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Acife_0959 1a9926ab2557796f5df5e333087913be 102 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 97 25.737 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Acife_0959 1a9926ab2557796f5df5e333087913be 102 SUPERFAMILY SSF54736 17 101 3.19E-29 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Acife_1140 f6003cbb16cac77b42d52d93a0dd4f89 97 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 6 93 8.8E-38 T 12-10-2018 IPR014057 Uncharacterized protein HI1420 Acife_1140 f6003cbb16cac77b42d52d93a0dd4f89 97 SUPERFAMILY SSF47413 31 90 2.77E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_2011 6dcd0c4f840f7cb1262fad522e60d652 324 Gene3D G3DSA:3.30.559.10 99 319 9.7E-42 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Acife_2011 6dcd0c4f840f7cb1262fad522e60d652 324 Gene3D G3DSA:2.40.50.100 1 98 3.0E-23 T 12-10-2018 Acife_2011 6dcd0c4f840f7cb1262fad522e60d652 324 SUPERFAMILY SSF51230 1 86 1.96E-19 T 12-10-2018 IPR011053 Single hybrid motif Acife_2011 6dcd0c4f840f7cb1262fad522e60d652 324 Pfam PF00364 Biotin-requiring enzyme 4 69 1.0E-11 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Acife_2011 6dcd0c4f840f7cb1262fad522e60d652 324 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Acife_2011 6dcd0c4f840f7cb1262fad522e60d652 324 SUPERFAMILY SSF52777 112 316 6.23E-40 T 12-10-2018 Acife_2011 6dcd0c4f840f7cb1262fad522e60d652 324 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 119 314 9.8E-36 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Acife_2939 2b3c49e4cce5c866b0ddea49fc9406dc 424 SUPERFAMILY SSF51338 2 423 7.81E-25 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Acife_2939 2b3c49e4cce5c866b0ddea49fc9406dc 424 Gene3D G3DSA:3.20.20.140 57 368 4.4E-106 T 12-10-2018 Acife_2939 2b3c49e4cce5c866b0ddea49fc9406dc 424 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 422 8.6E-85 T 12-10-2018 Acife_2939 2b3c49e4cce5c866b0ddea49fc9406dc 424 SUPERFAMILY SSF51556 56 365 3.28E-79 T 12-10-2018 IPR032466 Metal-dependent hydrolase Acife_2939 2b3c49e4cce5c866b0ddea49fc9406dc 424 Pfam PF01979 Amidohydrolase family 108 421 1.5E-15 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Acife_2939 2b3c49e4cce5c866b0ddea49fc9406dc 424 Gene3D G3DSA:2.30.40.10 9 421 4.4E-106 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Acife_3036 c688baef94997f07676bb15815bab5c2 1019 Gene3D G3DSA:2.60.120.260 431 594 1.4E-6 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Acife_3036 c688baef94997f07676bb15815bab5c2 1019 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 591 681 1.1E-5 T 12-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN Acife_3036 c688baef94997f07676bb15815bab5c2 1019 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 859 938 4.5E-20 T 12-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN Acife_1721 be1e5bb9a81753fe1223a06dca0b3bee 79 SMART SM00966 10 50 0.0056 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_1721 be1e5bb9a81753fe1223a06dca0b3bee 79 SUPERFAMILY SSF89447 7 72 9.94E-12 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_1721 be1e5bb9a81753fe1223a06dca0b3bee 79 Gene3D G3DSA:2.10.260.10 5 76 3.0E-12 T 12-10-2018 Acife_1721 be1e5bb9a81753fe1223a06dca0b3bee 79 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 10 56 2.5E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_0864 6e33b38e2c111d30cf13c7e9df5ed46d 393 Pfam PF00155 Aminotransferase class I and II 32 371 1.6E-57 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Acife_0864 6e33b38e2c111d30cf13c7e9df5ed46d 393 SUPERFAMILY SSF53383 2 390 9.52E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_0864 6e33b38e2c111d30cf13c7e9df5ed46d 393 Gene3D G3DSA:3.90.1150.10 289 386 5.6E-130 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_0864 6e33b38e2c111d30cf13c7e9df5ed46d 393 Gene3D G3DSA:3.40.640.10 64 288 5.6E-130 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_0491 aa92b4a0e681cead31a1517c3eb62ac6 215 SUPERFAMILY SSF161111 18 198 6.15E-37 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Acife_0491 aa92b4a0e681cead31a1517c3eb62ac6 215 Pfam PF01545 Cation efflux family 23 199 4.8E-18 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Acife_0491 aa92b4a0e681cead31a1517c3eb62ac6 215 Gene3D G3DSA:1.20.1510.10 19 200 1.8E-13 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Acife_1155 743b3d5739b19806b324c93e5f1aaa20 480 SUPERFAMILY SSF53448 5 286 4.33E-67 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1155 743b3d5739b19806b324c93e5f1aaa20 480 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 477 1.4E-172 T 12-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Acife_1155 743b3d5739b19806b324c93e5f1aaa20 480 Pfam PF00483 Nucleotidyl transferase 6 287 1.6E-54 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Acife_1155 743b3d5739b19806b324c93e5f1aaa20 480 Pfam PF01050 Mannose-6-phosphate isomerase 323 473 1.5E-66 T 12-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Acife_1155 743b3d5739b19806b324c93e5f1aaa20 480 SUPERFAMILY SSF51182 194 477 4.35E-76 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Acife_1155 743b3d5739b19806b324c93e5f1aaa20 480 Gene3D G3DSA:2.60.120.10 357 463 7.7E-18 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_1155 743b3d5739b19806b324c93e5f1aaa20 480 Gene3D G3DSA:3.90.550.10 4 356 2.5E-114 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1758 3f3005fe75b596a1fe10c872385934e5 304 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 18 38 3.3E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1758 3f3005fe75b596a1fe10c872385934e5 304 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 67 82 3.3E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1758 3f3005fe75b596a1fe10c872385934e5 304 Gene3D G3DSA:3.40.50.300 11 190 5.0E-42 T 12-10-2018 Acife_1758 3f3005fe75b596a1fe10c872385934e5 304 SUPERFAMILY SSF54814 188 303 1.24E-35 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Acife_1758 3f3005fe75b596a1fe10c872385934e5 304 Gene3D G3DSA:3.30.300.20 192 304 3.8E-35 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Acife_1758 3f3005fe75b596a1fe10c872385934e5 304 Pfam PF07650 KH domain 216 290 8.9E-10 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_1758 3f3005fe75b596a1fe10c872385934e5 304 Pfam PF01926 50S ribosome-binding GTPase 18 131 7.3E-22 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1758 3f3005fe75b596a1fe10c872385934e5 304 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 18 174 2.7E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Acife_1758 3f3005fe75b596a1fe10c872385934e5 304 Hamap MF_00367 GTPase Era [era]. 13 302 32.585 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_1758 3f3005fe75b596a1fe10c872385934e5 304 SUPERFAMILY SSF52540 18 211 5.29E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1758 3f3005fe75b596a1fe10c872385934e5 304 TIGRFAM TIGR00436 era: GTP-binding protein Era 16 285 7.4E-72 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2831 91e66580cc0171e2788e5fcc5dc703d0 292 Gene3D G3DSA:3.40.50.150 101 290 5.6E-47 T 12-10-2018 Acife_2831 91e66580cc0171e2788e5fcc5dc703d0 292 SUPERFAMILY SSF53335 77 268 1.17E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2831 91e66580cc0171e2788e5fcc5dc703d0 292 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 5 288 5.3E-73 T 12-10-2018 Acife_2831 91e66580cc0171e2788e5fcc5dc703d0 292 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 5 288 27.691 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Acife_2831 91e66580cc0171e2788e5fcc5dc703d0 292 PIRSF PIRSF000401 3 290 9.5E-71 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Acife_2831 91e66580cc0171e2788e5fcc5dc703d0 292 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 5 281 4.5E-58 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Acife_2857 458744b3a5ffc1f05c70381e19dcab8f 200 SUPERFAMILY SSF52540 1 192 1.01E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2857 458744b3a5ffc1f05c70381e19dcab8f 200 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 190 2.2E-52 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Acife_2857 458744b3a5ffc1f05c70381e19dcab8f 200 Pfam PF01121 Dephospho-CoA kinase 5 184 1.3E-56 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Acife_2857 458744b3a5ffc1f05c70381e19dcab8f 200 Gene3D G3DSA:3.40.50.300 1 200 6.2E-63 T 12-10-2018 Acife_2857 458744b3a5ffc1f05c70381e19dcab8f 200 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 200 25.94 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Acife_1134 b35a62350238bba44c11cd3af8d4028a 437 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 6 433 3.8E-157 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Acife_1134 b35a62350238bba44c11cd3af8d4028a 437 PIRSF PIRSF000423 1 435 1.6E-170 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Acife_1134 b35a62350238bba44c11cd3af8d4028a 437 Gene3D G3DSA:3.40.630.30 288 435 7.0E-39 T 12-10-2018 Acife_1134 b35a62350238bba44c11cd3af8d4028a 437 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 435 185.999 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Acife_1134 b35a62350238bba44c11cd3af8d4028a 437 SUPERFAMILY SSF53633 4 286 6.55E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_1134 b35a62350238bba44c11cd3af8d4028a 437 Gene3D G3DSA:3.40.1160.10 5 287 5.5E-89 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_1134 b35a62350238bba44c11cd3af8d4028a 437 Pfam PF00583 Acetyltransferase (GNAT) family 320 395 1.4E-13 T 12-10-2018 IPR000182 GNAT domain Acife_1134 b35a62350238bba44c11cd3af8d4028a 437 Pfam PF00696 Amino acid kinase family 24 261 9.3E-29 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Acife_1134 b35a62350238bba44c11cd3af8d4028a 437 SUPERFAMILY SSF55729 260 395 1.11E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_1693 29eabacee3d2f07dfb70cf90f0917f7a 539 Pfam PF13520 Amino acid permease 20 429 1.1E-42 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Acife_1693 29eabacee3d2f07dfb70cf90f0917f7a 539 Gene3D G3DSA:1.20.1740.10 13 466 7.0E-59 T 12-10-2018 Acife_1693 29eabacee3d2f07dfb70cf90f0917f7a 539 PIRSF PIRSF006060 3 462 5.9E-66 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Acife_1693 29eabacee3d2f07dfb70cf90f0917f7a 539 PIRSF PIRSF006060 452 528 3100.0 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Acife_1113 dad6de0fec5ef13745c3759b9737fb02 260 SUPERFAMILY SSF110399 4 245 6.67E-88 T 12-10-2018 Acife_1113 dad6de0fec5ef13745c3759b9737fb02 260 Pfam PF05690 Thiazole biosynthesis protein ThiG 8 253 1.5E-109 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Acife_1113 dad6de0fec5ef13745c3759b9737fb02 260 Gene3D G3DSA:3.20.20.70 1 259 1.5E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1113 dad6de0fec5ef13745c3759b9737fb02 260 Hamap MF_00443 Thiazole synthase [thiG]. 5 259 42.38 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Acife_2844 2beebba0014d7c062d690df5e6a0b1d2 152 SUPERFAMILY SSF54637 6 147 7.7E-7 T 12-10-2018 IPR029069 HotDog domain superfamily Acife_2844 2beebba0014d7c062d690df5e6a0b1d2 152 Gene3D G3DSA:3.10.129.10 1 150 2.1E-5 T 12-10-2018 Acife_2858 5ad89c4d4c3f8057b159a7a8b25a00d7 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 112 129 2.0E-18 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Acife_2858 5ad89c4d4c3f8057b159a7a8b25a00d7 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 175 185 2.0E-18 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Acife_2858 5ad89c4d4c3f8057b159a7a8b25a00d7 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 198 213 2.0E-18 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Acife_2858 5ad89c4d4c3f8057b159a7a8b25a00d7 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 186 197 2.0E-18 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Acife_2858 5ad89c4d4c3f8057b159a7a8b25a00d7 261 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 10 90 1.4E-35 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal Acife_2858 5ad89c4d4c3f8057b159a7a8b25a00d7 261 Pfam PF01478 Type IV leader peptidase family 103 217 3.0E-23 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Acife_2028 f97a2ecdcc57ade262797295107a3a57 434 SUPERFAMILY SSF51905 139 304 2.59E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2028 f97a2ecdcc57ade262797295107a3a57 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 301 1.5E-19 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_2028 f97a2ecdcc57ade262797295107a3a57 434 SUPERFAMILY SSF51905 3 342 2.54E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2028 f97a2ecdcc57ade262797295107a3a57 434 Gene3D G3DSA:3.50.50.100 1 418 5.2E-179 T 12-10-2018 Acife_3195 58e24757d06a091a29c3f2b51026f662 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 22 79 4.4E-18 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Acife_3195 58e24757d06a091a29c3f2b51026f662 84 Gene3D G3DSA:1.20.20.10 1 84 3.4E-25 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3195 58e24757d06a091a29c3f2b51026f662 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 42 63 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3195 58e24757d06a091a29c3f2b51026f662 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 77 12.925 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3195 58e24757d06a091a29c3f2b51026f662 84 SUPERFAMILY SSF81333 5 81 2.75E-17 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Acife_3195 58e24757d06a091a29c3f2b51026f662 84 Pfam PF00137 ATP synthase subunit C 13 74 7.8E-10 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 Gene3D G3DSA:3.40.50.300 202 370 1.1E-39 T 12-10-2018 Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 Pfam PF13167 GTP-binding GTPase N-terminal 33 117 7.9E-27 T 12-10-2018 IPR025121 GTPase HflX, N-terminal Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 PIRSF PIRSF006809 7 425 7.8E-138 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 Gene3D G3DSA:3.40.50.11060 26 143 4.5E-33 T 12-10-2018 Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 15 364 6.8E-141 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 SUPERFAMILY SSF52540 203 372 5.31E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 Pfam PF01926 50S ribosome-binding GTPase 205 323 1.7E-19 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 Pfam PF16360 GTP-binding GTPase Middle Region 119 197 2.0E-27 T 12-10-2018 IPR032305 GTP-binding protein, middle domain Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 Hamap MF_00900 GTPase HflX [hflX]. 32 394 46.821 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 205 225 2.6E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 272 290 2.6E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1422 43b1e250e6e2a8390aac1497efcb4426 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 226 244 2.6E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Acife_1057 630f0f9b28ad2bf65e395bac2685ee1b 361 Gene3D G3DSA:3.20.20.30 5 358 8.7E-93 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Acife_1057 630f0f9b28ad2bf65e395bac2685ee1b 361 Pfam PF00296 Luciferase-like monooxygenase 19 325 8.3E-56 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Acife_1057 630f0f9b28ad2bf65e395bac2685ee1b 361 SUPERFAMILY SSF51679 10 356 9.42E-78 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Acife_2540 f02973b197ae397bb3d98e00407e9ca6 104 PIRSF PIRSF019883 1 102 1.8E-25 T 12-10-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane Acife_2540 f02973b197ae397bb3d98e00407e9ca6 104 Pfam PF10993 Protein of unknown function (DUF2818) 9 98 1.5E-33 T 12-10-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane Acife_2148 5f4846d847d0268e8e07a5eef74880b7 670 Gene3D G3DSA:2.40.33.10 208 223 4.2E-18 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_2148 5f4846d847d0268e8e07a5eef74880b7 670 Pfam PF00224 Pyruvate kinase, barrel domain 355 596 2.8E-35 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_2148 5f4846d847d0268e8e07a5eef74880b7 670 Pfam PF00224 Pyruvate kinase, barrel domain 138 215 3.8E-9 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_2148 5f4846d847d0268e8e07a5eef74880b7 670 Gene3D G3DSA:3.20.20.60 428 589 6.5E-60 T 12-10-2018 Acife_2148 5f4846d847d0268e8e07a5eef74880b7 670 SUPERFAMILY SSF51621 119 599 8.37E-62 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Acife_2148 5f4846d847d0268e8e07a5eef74880b7 670 SUPERFAMILY SSF50800 336 427 2.27E-7 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Acife_2148 5f4846d847d0268e8e07a5eef74880b7 670 Gene3D G3DSA:2.40.33.10 334 427 6.5E-60 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Acife_2148 5f4846d847d0268e8e07a5eef74880b7 670 Gene3D G3DSA:3.20.20.60 140 207 4.2E-18 T 12-10-2018 Acife_0730 f154a1d0804320d739e44430144de76d 106 SMART SM00411 17 105 0.0079 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0730 f154a1d0804320d739e44430144de76d 106 PRINTS PR01727 Prokaryotic integration host factor signature 55 70 9.9E-7 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0730 f154a1d0804320d739e44430144de76d 106 PRINTS PR01727 Prokaryotic integration host factor signature 73 86 9.9E-7 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0730 f154a1d0804320d739e44430144de76d 106 PRINTS PR01727 Prokaryotic integration host factor signature 89 103 9.9E-7 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0730 f154a1d0804320d739e44430144de76d 106 Gene3D G3DSA:4.10.520.10 44 106 1.0E-13 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_0730 f154a1d0804320d739e44430144de76d 106 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 61 80 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Acife_0730 f154a1d0804320d739e44430144de76d 106 Pfam PF00216 Bacterial DNA-binding protein 50 104 7.8E-12 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0730 f154a1d0804320d739e44430144de76d 106 SUPERFAMILY SSF47729 48 105 1.35E-13 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_1740 f622aeeacf32aaf9fed579cf91a935e2 141 SUPERFAMILY SSF46785 10 128 3.08E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1740 f622aeeacf32aaf9fed579cf91a935e2 141 Gene3D G3DSA:1.10.10.10 5 88 5.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1740 f622aeeacf32aaf9fed579cf91a935e2 141 Pfam PF01475 Ferric uptake regulator family 18 109 3.0E-16 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Acife_1748 6321e593512b743a0ad0b73a2af5a685 147 SUPERFAMILY SSF52499 4 145 2.62E-10 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Acife_1748 6321e593512b743a0ad0b73a2af5a685 147 Gene3D G3DSA:3.40.50.850 1 146 5.7E-6 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Acife_1267 47ea27fa0a2b487fb9ab29b3d8116fc8 149 Gene3D G3DSA:3.10.420.10 1 149 2.3E-54 T 12-10-2018 IPR035958 SecB-like superfamily Acife_1267 47ea27fa0a2b487fb9ab29b3d8116fc8 149 SUPERFAMILY SSF54611 7 139 6.1E-46 T 12-10-2018 IPR035958 SecB-like superfamily Acife_1267 47ea27fa0a2b487fb9ab29b3d8116fc8 149 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 3 140 1.0E-50 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Acife_1267 47ea27fa0a2b487fb9ab29b3d8116fc8 149 Pfam PF02556 Preprotein translocase subunit SecB 3 142 2.8E-52 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Acife_1267 47ea27fa0a2b487fb9ab29b3d8116fc8 149 Hamap MF_00821 Protein-export protein SecB [secB]. 1 144 30.929 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Acife_1267 47ea27fa0a2b487fb9ab29b3d8116fc8 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 96 118 1.3E-32 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Acife_1267 47ea27fa0a2b487fb9ab29b3d8116fc8 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 122 140 1.3E-32 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Acife_1267 47ea27fa0a2b487fb9ab29b3d8116fc8 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 72 92 1.3E-32 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Acife_1267 47ea27fa0a2b487fb9ab29b3d8116fc8 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 10 27 1.3E-32 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Acife_2195 44f991938cdb3fdbb3eef7ebfd4fcd84 429 SUPERFAMILY SSF53244 285 419 1.5E-22 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_2195 44f991938cdb3fdbb3eef7ebfd4fcd84 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 419 4.5E-89 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Acife_2195 44f991938cdb3fdbb3eef7ebfd4fcd84 429 PIRSF PIRSF001563 12 426 2.0E-91 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Acife_2195 44f991938cdb3fdbb3eef7ebfd4fcd84 429 Pfam PF08245 Mur ligase middle domain 49 191 3.6E-7 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Acife_2195 44f991938cdb3fdbb3eef7ebfd4fcd84 429 Gene3D G3DSA:3.90.190.20 287 425 1.6E-21 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_2195 44f991938cdb3fdbb3eef7ebfd4fcd84 429 Gene3D G3DSA:3.40.1190.10 10 286 8.2E-74 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_2195 44f991938cdb3fdbb3eef7ebfd4fcd84 429 SUPERFAMILY SSF53623 21 270 5.68E-72 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_1127 b5c9a0721e3726529e23d9b0731dcba8 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 106 5.0E-38 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Acife_1127 b5c9a0721e3726529e23d9b0731dcba8 108 Gene3D G3DSA:3.40.30.10 1 107 2.9E-35 T 12-10-2018 Acife_1127 b5c9a0721e3726529e23d9b0731dcba8 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Acife_1127 b5c9a0721e3726529e23d9b0731dcba8 108 PIRSF PIRSF000077 2 108 1.2E-43 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Acife_1127 b5c9a0721e3726529e23d9b0731dcba8 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 12-10-2018 Acife_1127 b5c9a0721e3726529e23d9b0731dcba8 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 12-10-2018 Acife_1127 b5c9a0721e3726529e23d9b0731dcba8 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 12-10-2018 Acife_1127 b5c9a0721e3726529e23d9b0731dcba8 108 Pfam PF00085 Thioredoxin 6 106 4.4E-33 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 Acife_1127 b5c9a0721e3726529e23d9b0731dcba8 108 SUPERFAMILY SSF52833 3 108 3.72E-39 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0160 6dcadac16c4333c3f6145e2f7ad1ed31 233 Gene3D G3DSA:3.30.2010.10 141 232 3.9E-14 T 12-10-2018 Acife_0160 6dcadac16c4333c3f6145e2f7ad1ed31 233 Pfam PF01863 Protein of unknown function DUF45 24 230 9.4E-55 T 12-10-2018 IPR002725 Protein of unknown function DUF45 Acife_1436 f07e9de5adf9c61560bd7a8defad4888 238 Pfam PF00308 Bacterial dnaA protein 45 206 1.2E-6 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Acife_1436 f07e9de5adf9c61560bd7a8defad4888 238 Gene3D G3DSA:1.10.8.60 168 233 9.4E-19 T 12-10-2018 Acife_1436 f07e9de5adf9c61560bd7a8defad4888 238 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 6 232 3.0E-62 T 12-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 Acife_1436 f07e9de5adf9c61560bd7a8defad4888 238 SUPERFAMILY SSF52540 17 206 5.12E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1436 f07e9de5adf9c61560bd7a8defad4888 238 Gene3D G3DSA:3.40.50.300 1 164 3.5E-20 T 12-10-2018 Acife_0013 c5276f40f18750704673aa5def4a580b 365 SUPERFAMILY SSF47781 8 53 9.53E-5 T 12-10-2018 IPR010994 RuvA domain 2-like Acife_0013 c5276f40f18750704673aa5def4a580b 365 Gene3D G3DSA:3.40.50.450 1 287 3.7E-102 T 12-10-2018 Acife_0013 c5276f40f18750704673aa5def4a580b 365 Gene3D G3DSA:1.10.10.10 289 360 3.8E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0013 c5276f40f18750704673aa5def4a580b 365 SUPERFAMILY SSF102405 80 283 4.03E-44 T 12-10-2018 Acife_0013 c5276f40f18750704673aa5def4a580b 365 Pfam PF02481 DNA recombination-mediator protein A 73 274 5.9E-71 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Acife_0013 c5276f40f18750704673aa5def4a580b 365 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 69 283 9.6E-70 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Acife_1745 250933273b158d72b772f9307daf7661 410 SUPERFAMILY SSF103473 6 391 3.4E-27 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_1745 250933273b158d72b772f9307daf7661 410 Pfam PF07690 Major Facilitator Superfamily 31 333 1.7E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_1745 250933273b158d72b772f9307daf7661 410 Gene3D G3DSA:1.20.1250.20 4 391 2.2E-19 T 12-10-2018 Acife_2587 593713087ace29fb8d7236b182617c29 136 SUPERFAMILY SSF69118 4 120 2.26E-16 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Acife_2587 593713087ace29fb8d7236b182617c29 136 Gene3D G3DSA:1.20.1290.10 2 125 1.1E-25 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Acife_2587 593713087ace29fb8d7236b182617c29 136 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 116 1.4E-10 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Acife_1825 39bf4a2ac140e6e0f5aca05fb25c4200 81 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 3.3E-21 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Acife_1825 39bf4a2ac140e6e0f5aca05fb25c4200 81 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 57 69 3.3E-21 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Acife_1825 39bf4a2ac140e6e0f5aca05fb25c4200 81 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 3.3E-21 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Acife_1825 39bf4a2ac140e6e0f5aca05fb25c4200 81 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 39 55 3.3E-21 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Acife_1825 39bf4a2ac140e6e0f5aca05fb25c4200 81 Gene3D G3DSA:2.40.50.970 1 75 1.1E-24 T 12-10-2018 IPR037254 HupF/HypC superfamily Acife_1825 39bf4a2ac140e6e0f5aca05fb25c4200 81 SUPERFAMILY SSF159127 1 75 8.11E-23 T 12-10-2018 IPR037254 HupF/HypC superfamily Acife_1825 39bf4a2ac140e6e0f5aca05fb25c4200 81 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 12-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site Acife_1825 39bf4a2ac140e6e0f5aca05fb25c4200 81 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 76 2.0E-22 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Acife_1825 39bf4a2ac140e6e0f5aca05fb25c4200 81 Pfam PF01455 HupF/HypC family 1 66 8.3E-25 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Acife_2968 2cd069ff3ea06f562949ed5ecb62df96 76 SUPERFAMILY SSF89447 4 64 5.02E-6 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_2968 2cd069ff3ea06f562949ed5ecb62df96 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 33 5.8E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_2968 2cd069ff3ea06f562949ed5ecb62df96 76 Gene3D G3DSA:2.10.260.10 1 76 2.1E-37 T 12-10-2018 Acife_1177 57821a898dbc6e19511eb394d17cbc1e 256 Pfam PF00483 Nucleotidyl transferase 2 204 9.2E-18 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Acife_1177 57821a898dbc6e19511eb394d17cbc1e 256 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 255 4.3E-143 T 12-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 Acife_1177 57821a898dbc6e19511eb394d17cbc1e 256 Gene3D G3DSA:3.90.550.10 1 256 2.1E-74 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1177 57821a898dbc6e19511eb394d17cbc1e 256 SUPERFAMILY SSF53448 1 255 1.17E-70 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2282 5730bf304d3ada0d6b36e979ab94584f 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.956 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Acife_2282 5730bf304d3ada0d6b36e979ab94584f 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 2.5E-35 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Acife_2282 5730bf304d3ada0d6b36e979ab94584f 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.2E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Acife_2282 5730bf304d3ada0d6b36e979ab94584f 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.2E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Acife_2282 5730bf304d3ada0d6b36e979ab94584f 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.2E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Acife_2282 5730bf304d3ada0d6b36e979ab94584f 96 PRINTS PR00297 10kDa chaperonin signature 81 94 3.2E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Acife_2282 5730bf304d3ada0d6b36e979ab94584f 96 Gene3D G3DSA:2.30.33.40 1 96 9.6E-40 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Acife_2282 5730bf304d3ada0d6b36e979ab94584f 96 SUPERFAMILY SSF50129 1 95 6.12E-36 T 12-10-2018 IPR011032 GroES-like superfamily Acife_2282 5730bf304d3ada0d6b36e979ab94584f 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Acife_2282 5730bf304d3ada0d6b36e979ab94584f 96 SMART SM00883 2 94 1.5E-59 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.3E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.3E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.3E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.3E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.3E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 Pfam PF00106 short chain dehydrogenase 7 190 8.9E-56 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 Gene3D G3DSA:3.40.50.720 1 241 1.2E-71 T 12-10-2018 Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.9E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.9E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.9E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 0.0036 T 12-10-2018 Acife_0357 ab69d563ebf9895988f1c9506c6c68e1 242 SUPERFAMILY SSF51735 1 227 2.01E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1473 c94420d00e304a77778c32bba45bc1a2 119 SUPERFAMILY SSF54427 8 117 4.96E-16 T 12-10-2018 IPR032710 NTF2-like domain superfamily Acife_1473 c94420d00e304a77778c32bba45bc1a2 119 Pfam PF12680 SnoaL-like domain 12 82 1.4E-9 T 12-10-2018 IPR037401 SnoaL-like domain Acife_1473 c94420d00e304a77778c32bba45bc1a2 119 Gene3D G3DSA:3.10.450.50 1 119 3.3E-38 T 12-10-2018 Acife_1836 c351025954c70c3f0d0e3c3e60e42759 291 PRINTS PR00987 Glutamyl-tRNA synthetase signature 10 22 3.9E-12 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_1836 c351025954c70c3f0d0e3c3e60e42759 291 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 3.9E-12 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_1836 c351025954c70c3f0d0e3c3e60e42759 291 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 52 3.9E-12 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_1836 c351025954c70c3f0d0e3c3e60e42759 291 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 35 3.9E-12 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_1836 c351025954c70c3f0d0e3c3e60e42759 291 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 3.9E-12 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Acife_1836 c351025954c70c3f0d0e3c3e60e42759 291 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 8 265 3.9E-96 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 Acife_1836 c351025954c70c3f0d0e3c3e60e42759 291 Gene3D G3DSA:3.40.50.620 82 218 2.1E-84 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_1836 c351025954c70c3f0d0e3c3e60e42759 291 Gene3D G3DSA:3.40.50.620 9 273 2.1E-84 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_1836 c351025954c70c3f0d0e3c3e60e42759 291 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 159 237 4.1E-10 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Acife_1836 c351025954c70c3f0d0e3c3e60e42759 291 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 110 1.6E-22 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Acife_1836 c351025954c70c3f0d0e3c3e60e42759 291 SUPERFAMILY SSF52374 7 243 5.63E-70 T 12-10-2018 Acife_1310 830e1671a05036e31cb07408b745e2b5 369 Gene3D G3DSA:3.40.640.10 1 247 1.3E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1310 830e1671a05036e31cb07408b745e2b5 369 SUPERFAMILY SSF53383 19 367 5.51E-110 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_1310 830e1671a05036e31cb07408b745e2b5 369 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 22 363 9.5E-123 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Acife_1310 830e1671a05036e31cb07408b745e2b5 369 PIRSF PIRSF000390 6 369 5.9E-109 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Acife_1310 830e1671a05036e31cb07408b745e2b5 369 Gene3D G3DSA:3.90.1150.10 251 368 5.5E-37 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1898 f9afae2ab3197304d46e91bcd991bd10 571 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 31 362 2.0E-64 T 12-10-2018 IPR014150 Conjugal transfer, TrbL Acife_1898 f9afae2ab3197304d46e91bcd991bd10 571 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 66 305 6.1E-22 T 12-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Acife_0259 bba1053b494f0112f6ca9d05916f400d 322 Gene3D G3DSA:1.10.600.10 1 322 6.4E-102 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Acife_0259 bba1053b494f0112f6ca9d05916f400d 322 Pfam PF00348 Polyprenyl synthetase 32 260 6.7E-67 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Acife_0259 bba1053b494f0112f6ca9d05916f400d 322 SUPERFAMILY SSF48576 5 321 3.36E-88 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Acife_1455 bb8136723b858dfedb74c8a2442978a9 71 SUPERFAMILY SSF54786 4 70 2.55E-15 T 12-10-2018 Acife_1455 bb8136723b858dfedb74c8a2442978a9 71 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 12 65 4.2E-15 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Acife_1455 bb8136723b858dfedb74c8a2442978a9 71 Gene3D G3DSA:3.30.920.30 4 71 1.2E-11 T 12-10-2018 IPR038570 HicA superfamily Acife_0889 56cc8284cae146d2e1d8758acb975629 380 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 199 300 3.5E-8 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_0889 56cc8284cae146d2e1d8758acb975629 380 Gene3D G3DSA:3.50.50.100 15 379 7.4E-60 T 12-10-2018 Acife_0889 56cc8284cae146d2e1d8758acb975629 380 SUPERFAMILY SSF51905 17 317 2.16E-19 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_0944 d74da4b6d50faa211da462d023a79720 68 SUPERFAMILY SSF143100 1 54 3.27E-11 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like Acife_0944 d74da4b6d50faa211da462d023a79720 68 Gene3D G3DSA:3.30.160.250 1 51 3.0E-8 T 12-10-2018 Acife_1561 1f7004110734e7ab153e6d7b2b288094 69 Pfam PF16277 Domain of unknown function (DUF4926) 4 57 2.3E-18 T 12-10-2018 IPR032568 Protein of unknown function DUF4926 Acife_0873 e1cae55f7cdb5ce86d21fae6f6d0f93b 605 Gene3D G3DSA:3.90.1640.30 56 339 1.1E-61 T 12-10-2018 Acife_0873 e1cae55f7cdb5ce86d21fae6f6d0f93b 605 SUPERFAMILY SSF64182 58 468 1.29E-78 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily Acife_0873 e1cae55f7cdb5ce86d21fae6f6d0f93b 605 Gene3D G3DSA:3.10.310.30 340 468 1.9E-21 T 12-10-2018 Acife_0873 e1cae55f7cdb5ce86d21fae6f6d0f93b 605 Pfam PF02272 DHHA1 domain 335 463 1.5E-10 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Acife_0802 21ecc4cf7aa527c9b3c139d366076460 116 SUPERFAMILY SSF69118 10 108 2.09E-23 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Acife_0802 21ecc4cf7aa527c9b3c139d366076460 116 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 104 8.8E-17 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Acife_0802 21ecc4cf7aa527c9b3c139d366076460 116 Gene3D G3DSA:1.20.1290.10 1 116 3.0E-26 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Acife_0802 21ecc4cf7aa527c9b3c139d366076460 116 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 83 1.4E-12 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Acife_2184 492eaf6c1ab6755d0778a79dd9a5f703 1017 Pfam PF04851 Type III restriction enzyme, res subunit 152 372 4.5E-12 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Acife_2184 492eaf6c1ab6755d0778a79dd9a5f703 1017 Gene3D G3DSA:3.40.50.300 454 670 3.1E-10 T 12-10-2018 Acife_2184 492eaf6c1ab6755d0778a79dd9a5f703 1017 SUPERFAMILY SSF52540 172 650 1.41E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3198 96e15db929013f10e742fd5683e320ac 282 Pfam PF02195 ParB-like nuclease domain 26 115 7.9E-27 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Acife_3198 96e15db929013f10e742fd5683e320ac 282 Gene3D G3DSA:1.10.10.2830 102 215 1.2E-35 T 12-10-2018 Acife_3198 96e15db929013f10e742fd5683e320ac 282 Gene3D G3DSA:3.90.1530.30 38 101 3.3E-25 T 12-10-2018 Acife_3198 96e15db929013f10e742fd5683e320ac 282 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 23 198 4.2E-56 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Acife_3198 96e15db929013f10e742fd5683e320ac 282 SMART SM00470 25 115 2.9E-35 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Acife_3198 96e15db929013f10e742fd5683e320ac 282 SUPERFAMILY SSF110849 24 156 5.75E-32 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Acife_0566 1e75a067d75f7defc0b3eb15fad61be8 288 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 14 283 6.0E-84 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Acife_0566 1e75a067d75f7defc0b3eb15fad61be8 288 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 13 286 37.433 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Acife_0566 1e75a067d75f7defc0b3eb15fad61be8 288 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 76 90 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Acife_0566 1e75a067d75f7defc0b3eb15fad61be8 288 Gene3D G3DSA:3.10.310.10 15 282 2.5E-97 T 12-10-2018 Acife_0566 1e75a067d75f7defc0b3eb15fad61be8 288 Pfam PF01678 Diaminopimelate epimerase 15 134 2.5E-30 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Acife_0566 1e75a067d75f7defc0b3eb15fad61be8 288 Pfam PF01678 Diaminopimelate epimerase 164 278 5.0E-24 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Acife_0566 1e75a067d75f7defc0b3eb15fad61be8 288 Gene3D G3DSA:3.10.310.10 127 273 2.5E-97 T 12-10-2018 Acife_0566 1e75a067d75f7defc0b3eb15fad61be8 288 SUPERFAMILY SSF54506 12 286 4.8E-49 T 12-10-2018 Acife_0210 f614203f9aafb1401f551d1ca0f4ff7e 143 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 5 124 3.6E-16 T 12-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component Acife_0210 f614203f9aafb1401f551d1ca0f4ff7e 143 Pfam PF13470 PIN domain 5 119 1.4E-16 T 12-10-2018 IPR002716 PIN domain Acife_0210 f614203f9aafb1401f551d1ca0f4ff7e 143 SUPERFAMILY SSF88723 5 128 3.64E-9 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_0614 e213049ff9a4685d10edd1860ce2229d 402 Gene3D G3DSA:1.20.810.10 1 402 7.1E-130 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 Acife_0614 e213049ff9a4685d10edd1860ce2229d 402 Pfam PF00033 Cytochrome b/b6/petB 23 211 6.4E-59 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Acife_0614 e213049ff9a4685d10edd1860ce2229d 402 PIRSF PIRSF038885 1 402 5.5E-134 T 12-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 Acife_0614 e213049ff9a4685d10edd1860ce2229d 402 SUPERFAMILY SSF81648 204 369 5.49E-41 T 12-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Acife_0614 e213049ff9a4685d10edd1860ce2229d 402 SUPERFAMILY SSF81342 14 267 2.88E-80 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Acife_0614 e213049ff9a4685d10edd1860ce2229d 402 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 278 377 8.9E-30 T 12-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Acife_2171 269f6dd88cabf29e866196efdf3e8d79 258 Gene3D G3DSA:3.40.630.30 23 161 2.1E-23 T 12-10-2018 Acife_2171 269f6dd88cabf29e866196efdf3e8d79 258 SUPERFAMILY SSF55729 22 226 2.88E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_2171 269f6dd88cabf29e866196efdf3e8d79 258 Pfam PF13444 Acetyltransferase (GNAT) domain 38 138 4.7E-32 T 12-10-2018 Acife_0184 5817dfc38af5003a16f276b1a125d16a 356 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Acife_0184 5817dfc38af5003a16f276b1a125d16a 356 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 7.8E-98 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Acife_0184 5817dfc38af5003a16f276b1a125d16a 356 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 328 5.6E-94 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Acife_0184 5817dfc38af5003a16f276b1a125d16a 356 Gene3D G3DSA:3.20.20.70 1 354 9.8E-152 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_0184 5817dfc38af5003a16f276b1a125d16a 356 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Acife_0184 5817dfc38af5003a16f276b1a125d16a 356 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 1.3E-195 T 12-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Acife_0184 5817dfc38af5003a16f276b1a125d16a 356 SUPERFAMILY SSF51569 1 329 1.39E-107 T 12-10-2018 Acife_0184 5817dfc38af5003a16f276b1a125d16a 356 PIRSF PIRSF001359 1 329 9.1E-85 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Acife_1448 bef867fbe4e98eb84227033eeb62c3c6 216 ProSitePatterns PS01331 Thymidylate kinase signature. 100 112 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Acife_1448 bef867fbe4e98eb84227033eeb62c3c6 216 Gene3D G3DSA:3.40.50.300 8 211 3.7E-55 T 12-10-2018 Acife_1448 bef867fbe4e98eb84227033eeb62c3c6 216 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 9 201 2.7E-44 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Acife_1448 bef867fbe4e98eb84227033eeb62c3c6 216 Hamap MF_00165 Thymidylate kinase [tmk]. 12 211 26.087 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Acife_1448 bef867fbe4e98eb84227033eeb62c3c6 216 SUPERFAMILY SSF52540 9 197 8.33E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1448 bef867fbe4e98eb84227033eeb62c3c6 216 Pfam PF02223 Thymidylate kinase 16 201 3.7E-41 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Acife_1552 df9060ec61230a143cc181e10e594080 158 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 36 1.2E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1552 df9060ec61230a143cc181e10e594080 158 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 36 5.8E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_0846 c6da11272ace971f30dcf7f55c21c460 88 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 24 87 4.5E-9 T 12-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Acife_0846 c6da11272ace971f30dcf7f55c21c460 88 SUPERFAMILY SSF143011 4 88 6.02E-19 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_0846 c6da11272ace971f30dcf7f55c21c460 88 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 8 87 4.8E-26 T 12-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Acife_0846 c6da11272ace971f30dcf7f55c21c460 88 Gene3D G3DSA:3.30.2310.20 5 87 1.1E-11 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_1652 ca92db389d77c68e004dfe45c157addd 275 Pfam PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) 23 271 8.6E-101 T 12-10-2018 IPR009953 Dinitrogenase reductase ADP-ribosyltransferase GO:0009399|GO:0030701 Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 Pfam PF09179 TilS substrate binding domain 256 313 8.2E-7 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 30 205 2.8E-43 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 Pfam PF01171 PP-loop family 30 201 1.7E-41 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 SMART SM00977 377 448 2.3E-11 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 SUPERFAMILY SSF56037 343 447 9.68E-15 T 12-10-2018 Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 SUPERFAMILY SSF52402 29 230 1.26E-52 T 12-10-2018 Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 Gene3D G3DSA:1.20.59.20 246 315 2.8E-7 T 12-10-2018 Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 Gene3D G3DSA:3.40.50.620 22 235 1.1E-61 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 SUPERFAMILY SSF82829 253 315 9.02E-10 T 12-10-2018 Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 13 315 20.881 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 378 420 4.0E-10 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Acife_1315 d851860d1504236c0d472ce4ebf5abc0 464 Pfam PF11734 TilS substrate C-terminal domain 381 433 9.7E-11 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Acife_2465 be296fe9e596f385da24745339b5f622 353 Pfam PF00890 FAD binding domain 7 79 2.0E-7 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Acife_2465 be296fe9e596f385da24745339b5f622 353 Pfam PF01494 FAD binding domain 92 158 1.6E-6 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 Acife_2465 be296fe9e596f385da24745339b5f622 353 Pfam PF05834 Lycopene cyclase protein 213 294 2.0E-5 T 12-10-2018 Acife_2465 be296fe9e596f385da24745339b5f622 353 SUPERFAMILY SSF51905 6 328 4.14E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2465 be296fe9e596f385da24745339b5f622 353 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 137 152 3.5E-15 T 12-10-2018 Acife_2465 be296fe9e596f385da24745339b5f622 353 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.5E-15 T 12-10-2018 Acife_2465 be296fe9e596f385da24745339b5f622 353 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 254 269 3.5E-15 T 12-10-2018 Acife_2465 be296fe9e596f385da24745339b5f622 353 Gene3D G3DSA:3.50.50.60 3 344 3.7E-65 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2465 be296fe9e596f385da24745339b5f622 353 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 7 286 2.6E-54 T 12-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 Acife_0523 223f67570153dd2bf7caafc11164ef17 1064 SUPERFAMILY SSF52540 277 826 3.27E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0523 223f67570153dd2bf7caafc11164ef17 1064 SMART SM00487 225 415 3.8E-8 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_0523 223f67570153dd2bf7caafc11164ef17 1064 Pfam PF00176 SNF2 family N-terminal domain 241 291 2.7E-6 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Acife_0523 223f67570153dd2bf7caafc11164ef17 1064 Gene3D G3DSA:3.40.50.10810 227 472 7.3E-25 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Acife_0523 223f67570153dd2bf7caafc11164ef17 1064 SMART SM00490 699 801 7.6E-8 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_0523 223f67570153dd2bf7caafc11164ef17 1064 Gene3D G3DSA:3.40.50.300 630 828 7.1E-29 T 12-10-2018 Acife_0523 223f67570153dd2bf7caafc11164ef17 1064 Pfam PF00271 Helicase conserved C-terminal domain 678 801 4.6E-12 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1209 a3727a650ed53c6f4f7b65e2bf8889a9 242 Gene3D G3DSA:3.40.50.1820 12 237 3.6E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_1209 a3727a650ed53c6f4f7b65e2bf8889a9 242 Pfam PF01738 Dienelactone hydrolase family 17 236 6.1E-50 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Acife_1209 a3727a650ed53c6f4f7b65e2bf8889a9 242 SUPERFAMILY SSF53474 16 238 3.98E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_2080 4f8a00adcac3b5c067dc9cb78dab1923 261 Gene3D G3DSA:3.30.950.10 123 260 6.0E-39 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Acife_2080 4f8a00adcac3b5c067dc9cb78dab1923 261 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 9 241 3.4E-85 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Acife_2080 4f8a00adcac3b5c067dc9cb78dab1923 261 SUPERFAMILY SSF53790 5 245 3.14E-68 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Acife_2080 4f8a00adcac3b5c067dc9cb78dab1923 261 Gene3D G3DSA:3.40.1010.10 8 122 7.1E-40 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Acife_2080 4f8a00adcac3b5c067dc9cb78dab1923 261 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 12 26 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Acife_2080 4f8a00adcac3b5c067dc9cb78dab1923 261 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 215 2.5E-47 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Acife_2837 bae107fbfa720f9765d25f8bacacc7b4 440 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 169 184 1.4E-7 T 12-10-2018 Acife_2837 bae107fbfa720f9765d25f8bacacc7b4 440 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 18 40 1.4E-7 T 12-10-2018 Acife_2837 bae107fbfa720f9765d25f8bacacc7b4 440 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 314 1.4E-7 T 12-10-2018 Acife_2837 bae107fbfa720f9765d25f8bacacc7b4 440 Pfam PF01494 FAD binding domain 16 328 3.1E-20 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 Acife_2837 bae107fbfa720f9765d25f8bacacc7b4 440 Gene3D G3DSA:3.50.50.60 10 426 5.1E-116 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2837 bae107fbfa720f9765d25f8bacacc7b4 440 SUPERFAMILY SSF51905 16 395 2.84E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_0322 7e01eb1ca24c1dfdb4f7f7dc7e5eee61 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 14 440 68.329 T 12-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 Acife_0322 7e01eb1ca24c1dfdb4f7f7dc7e5eee61 440 SUPERFAMILY SSF53335 72 439 5.44E-75 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0322 7e01eb1ca24c1dfdb4f7f7dc7e5eee61 440 Gene3D G3DSA:3.40.1350.30 131 272 2.1E-99 T 12-10-2018 Acife_0322 7e01eb1ca24c1dfdb4f7f7dc7e5eee61 440 Gene3D G3DSA:3.40.50.150 84 435 2.1E-99 T 12-10-2018 Acife_0322 7e01eb1ca24c1dfdb4f7f7dc7e5eee61 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 423 433 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Acife_0322 7e01eb1ca24c1dfdb4f7f7dc7e5eee61 440 SUPERFAMILY SSF50249 14 69 1.09E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_0322 7e01eb1ca24c1dfdb4f7f7dc7e5eee61 440 Pfam PF01938 TRAM domain 15 61 9.7E-6 T 12-10-2018 IPR002792 TRAM domain Acife_0322 7e01eb1ca24c1dfdb4f7f7dc7e5eee61 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 260 437 4.0E-21 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Acife_0322 7e01eb1ca24c1dfdb4f7f7dc7e5eee61 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 372 401 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site Acife_0322 7e01eb1ca24c1dfdb4f7f7dc7e5eee61 440 Gene3D G3DSA:2.40.50.140 2 83 5.2E-26 T 12-10-2018 Acife_0322 7e01eb1ca24c1dfdb4f7f7dc7e5eee61 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 433 1.6E-88 T 12-10-2018 Acife_1005 e8a535db3b1a451ba8445228956f8097 212 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 190 8.5E-64 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Acife_1005 e8a535db3b1a451ba8445228956f8097 212 Gene3D G3DSA:3.40.50.1240 3 201 3.3E-66 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Acife_1005 e8a535db3b1a451ba8445228956f8097 212 SMART SM00855 4 156 1.1E-22 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Acife_1005 e8a535db3b1a451ba8445228956f8097 212 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Acife_1005 e8a535db3b1a451ba8445228956f8097 212 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 5 181 2.0E-49 T 12-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Acife_1005 e8a535db3b1a451ba8445228956f8097 212 SUPERFAMILY SSF53254 4 191 2.06E-60 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Acife_1005 e8a535db3b1a451ba8445228956f8097 212 PIRSF PIRSF000709 1 185 9.1E-14 T 12-10-2018 Acife_2306 85cb6fb29d8f35f1763ea378d4a1d652 802 SMART SM00670 649 759 1.6E-7 T 12-10-2018 IPR002716 PIN domain Acife_2306 85cb6fb29d8f35f1763ea378d4a1d652 802 SUPERFAMILY SSF88723 650 770 2.65E-8 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_2306 85cb6fb29d8f35f1763ea378d4a1d652 802 Gene3D G3DSA:3.40.50.1010 643 776 1.2E-20 T 12-10-2018 Acife_2306 85cb6fb29d8f35f1763ea378d4a1d652 802 Pfam PF13638 PIN domain 651 771 6.6E-24 T 12-10-2018 IPR002716 PIN domain Acife_1001 1038140e755ef46cff630aed98e55e41 414 Gene3D G3DSA:3.40.50.2000 16 222 4.7E-28 T 12-10-2018 Acife_1001 1038140e755ef46cff630aed98e55e41 414 Pfam PF13439 Glycosyltransferase Family 4 19 209 9.9E-21 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Acife_1001 1038140e755ef46cff630aed98e55e41 414 Pfam PF13692 Glycosyl transferases group 1 228 372 1.0E-27 T 12-10-2018 Acife_1001 1038140e755ef46cff630aed98e55e41 414 Gene3D G3DSA:3.40.50.2000 223 389 7.1E-38 T 12-10-2018 Acife_1001 1038140e755ef46cff630aed98e55e41 414 SUPERFAMILY SSF53756 17 406 5.34E-69 T 12-10-2018 Acife_1956 b137e053c4dafd67fb242f8793037ad9 95 SUPERFAMILY SSF47729 3 92 1.06E-22 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_1956 b137e053c4dafd67fb242f8793037ad9 95 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 2.8E-8 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1956 b137e053c4dafd67fb242f8793037ad9 95 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 2.8E-8 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1956 b137e053c4dafd67fb242f8793037ad9 95 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 2.8E-8 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1956 b137e053c4dafd67fb242f8793037ad9 95 SMART SM00411 3 92 1.9E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1956 b137e053c4dafd67fb242f8793037ad9 95 Gene3D G3DSA:4.10.520.10 1 93 2.1E-25 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_1956 b137e053c4dafd67fb242f8793037ad9 95 Pfam PF00216 Bacterial DNA-binding protein 3 89 3.2E-22 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0717 1beb3495ce893abe2e2a28dbdc5dc953 320 Pfam PF08346 AntA/AntB antirepressor 128 202 1.3E-26 T 12-10-2018 IPR013557 AntA/AntB antirepressor Acife_0621 db06de19ab6f8fb220cbf21896dd361c 320 Gene3D G3DSA:3.40.190.10 91 303 2.5E-93 T 12-10-2018 Acife_0621 db06de19ab6f8fb220cbf21896dd361c 320 Gene3D G3DSA:3.40.190.10 167 267 2.5E-93 T 12-10-2018 Acife_0621 db06de19ab6f8fb220cbf21896dd361c 320 Gene3D G3DSA:1.10.10.10 1 86 1.0E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0621 db06de19ab6f8fb220cbf21896dd361c 320 SUPERFAMILY SSF46785 1 87 3.02E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0621 db06de19ab6f8fb220cbf21896dd361c 320 Pfam PF03466 LysR substrate binding domain 90 294 4.1E-42 T 12-10-2018 IPR005119 LysR, substrate-binding Acife_0621 db06de19ab6f8fb220cbf21896dd361c 320 SUPERFAMILY SSF53850 93 301 9.37E-42 T 12-10-2018 Acife_0621 db06de19ab6f8fb220cbf21896dd361c 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0621 db06de19ab6f8fb220cbf21896dd361c 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0621 db06de19ab6f8fb220cbf21896dd361c 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0621 db06de19ab6f8fb220cbf21896dd361c 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.7E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 Gene3D G3DSA:2.40.50.140 87 163 1.5E-33 T 12-10-2018 Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 SUPERFAMILY SSF68912 41 86 9.81E-11 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 Hamap MF_01884 Transcription termination factor Rho [rho]. 41 458 238.221 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 SUPERFAMILY SSF50249 89 165 3.26E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 SMART SM00959 45 87 1.2E-14 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 SMART SM00357 92 158 9.2E-20 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 Pfam PF07497 Rho termination factor, RNA-binding domain 92 165 3.3E-31 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 Gene3D G3DSA:3.40.50.300 170 457 2.8E-129 T 12-10-2018 Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 Gene3D G3DSA:1.10.720.10 39 86 4.1E-18 T 12-10-2018 Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 TIGRFAM TIGR00767 rho: transcription termination factor Rho 42 457 7.1E-211 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 SUPERFAMILY SSF52540 130 411 5.96E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 SMART SM00382 210 396 2.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 Pfam PF07498 Rho termination factor, N-terminal domain 45 86 6.9E-15 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Acife_1128 391e21a2e905502047c3a6b6036c2ee9 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 200 403 2.5E-23 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Acife_0015 26c2eb9ab6c927a85c1618e8983b78d8 174 Gene3D G3DSA:3.90.45.10 6 172 5.3E-58 T 12-10-2018 IPR036821 Peptide deformylase superfamily Acife_0015 26c2eb9ab6c927a85c1618e8983b78d8 174 PRINTS PR01576 Peptide deformylase signature 127 156 2.3E-35 T 12-10-2018 IPR023635 Peptide deformylase Acife_0015 26c2eb9ab6c927a85c1618e8983b78d8 174 PRINTS PR01576 Peptide deformylase signature 96 107 2.3E-35 T 12-10-2018 IPR023635 Peptide deformylase Acife_0015 26c2eb9ab6c927a85c1618e8983b78d8 174 PRINTS PR01576 Peptide deformylase signature 108 126 2.3E-35 T 12-10-2018 IPR023635 Peptide deformylase Acife_0015 26c2eb9ab6c927a85c1618e8983b78d8 174 PRINTS PR01576 Peptide deformylase signature 40 69 2.3E-35 T 12-10-2018 IPR023635 Peptide deformylase Acife_0015 26c2eb9ab6c927a85c1618e8983b78d8 174 SUPERFAMILY SSF56420 10 169 2.09E-56 T 12-10-2018 IPR036821 Peptide deformylase superfamily Acife_0015 26c2eb9ab6c927a85c1618e8983b78d8 174 PIRSF PIRSF004749 3 172 5.7E-54 T 12-10-2018 IPR023635 Peptide deformylase Acife_0015 26c2eb9ab6c927a85c1618e8983b78d8 174 Pfam PF01327 Polypeptide deformylase 12 159 3.3E-48 T 12-10-2018 IPR023635 Peptide deformylase Acife_0015 26c2eb9ab6c927a85c1618e8983b78d8 174 Hamap MF_00163 Peptide deformylase [def]. 9 169 28.809 T 12-10-2018 IPR023635 Peptide deformylase Acife_0015 26c2eb9ab6c927a85c1618e8983b78d8 174 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 11 165 1.6E-53 T 12-10-2018 IPR023635 Peptide deformylase Acife_2771 73ce2a41ee40a75b44fcedffea41f6ed 287 Hamap MF_00082 Acetylglutamate kinase [argB]. 27 280 50.356 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Acife_2771 73ce2a41ee40a75b44fcedffea41f6ed 287 PRINTS PR00474 Glutamate 5-kinase family signature 237 257 4.2E-7 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2771 73ce2a41ee40a75b44fcedffea41f6ed 287 PRINTS PR00474 Glutamate 5-kinase family signature 187 214 4.2E-7 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2771 73ce2a41ee40a75b44fcedffea41f6ed 287 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 4.2E-7 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Acife_2771 73ce2a41ee40a75b44fcedffea41f6ed 287 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 262 4.3E-75 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Acife_2771 73ce2a41ee40a75b44fcedffea41f6ed 287 PIRSF PIRSF000728 13 287 3.3E-108 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Acife_2771 73ce2a41ee40a75b44fcedffea41f6ed 287 Pfam PF00696 Amino acid kinase family 29 264 2.0E-47 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Acife_2771 73ce2a41ee40a75b44fcedffea41f6ed 287 SUPERFAMILY SSF53633 5 286 3.93E-94 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_2771 73ce2a41ee40a75b44fcedffea41f6ed 287 Gene3D G3DSA:3.40.1160.10 4 287 2.2E-100 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_1126 a8c458c5d1fda01f988dc41ddbb02c6c 238 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_1126 a8c458c5d1fda01f988dc41ddbb02c6c 238 Gene3D G3DSA:3.40.50.300 8 235 3.8E-59 T 12-10-2018 Acife_1126 a8c458c5d1fda01f988dc41ddbb02c6c 238 SMART SM00382 46 234 7.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1126 a8c458c5d1fda01f988dc41ddbb02c6c 238 SUPERFAMILY SSF52540 19 228 4.54E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1126 a8c458c5d1fda01f988dc41ddbb02c6c 238 Pfam PF00005 ABC transporter 38 185 8.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_1679 f4dd5e25cc8692af6cff551094a60042 168 Pfam PF08808 RES domain 16 157 3.9E-27 T 12-10-2018 IPR014914 RES domain Acife_1679 f4dd5e25cc8692af6cff551094a60042 168 SMART SM00953 24 150 2.0E-31 T 12-10-2018 IPR014914 RES domain Acife_1618 dd4dddc9414d6d0e430a337c6b61c375 95 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 14 89 1.4E-6 T 12-10-2018 Acife_1618 dd4dddc9414d6d0e430a337c6b61c375 95 SUPERFAMILY SSF54862 22 93 5.44E-12 T 12-10-2018 Acife_1618 dd4dddc9414d6d0e430a337c6b61c375 95 PIRSF PIRSF036548 1 95 4.1E-39 T 12-10-2018 IPR012206 Ferredoxin-like, FixX GO:0005506 Acife_1618 dd4dddc9414d6d0e430a337c6b61c375 95 Gene3D G3DSA:3.30.70.20 6 89 5.9E-12 T 12-10-2018 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 SUPERFAMILY SSF51735 1 155 7.99E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 Gene3D G3DSA:3.30.360.10 155 318 2.5E-144 T 12-10-2018 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 PIRSF PIRSF000149 1 338 2.3E-134 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 105 1.6E-35 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 3.7E-129 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 Gene3D G3DSA:3.40.50.720 4 328 2.5E-144 T 12-10-2018 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 SMART SM00846 3 156 4.5E-95 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 273 288 3.9E-39 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 3.9E-39 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 3.9E-39 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 3.9E-39 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 3.9E-39 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 316 2.4E-62 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0187 872182e2c2791c0bcbb16aa32aa4937e 338 SUPERFAMILY SSF55347 156 317 5.92E-69 T 12-10-2018 Acife_3144 e8381901d61cb46cf94bb529bc328da7 110 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 13 108 3.4E-38 T 12-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_3144 e8381901d61cb46cf94bb529bc328da7 110 SMART SM00961 12 109 9.9E-51 T 12-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_3144 e8381901d61cb46cf94bb529bc328da7 110 Gene3D G3DSA:3.30.190.10 1 110 2.4E-43 T 12-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_3144 e8381901d61cb46cf94bb529bc328da7 110 SUPERFAMILY SSF55239 5 108 7.72E-42 T 12-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_0368 b9d00b33d0074afa7f0d84b2d7948e34 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 51 6.6E-8 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Acife_0368 b9d00b33d0074afa7f0d84b2d7948e34 73 SUPERFAMILY SSF143120 1 41 2.35E-6 T 12-10-2018 IPR036165 YefM-like superfamily Acife_2782 76f65d574fc652ffa376466fb8e78ad9 234 PIRSF PIRSF006755 15 231 1.2E-60 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Acife_2782 76f65d574fc652ffa376466fb8e78ad9 234 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 15 218 27.824 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Acife_2782 76f65d574fc652ffa376466fb8e78ad9 234 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 19 186 5.8E-46 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Acife_2782 76f65d574fc652ffa376466fb8e78ad9 234 SUPERFAMILY SSF52540 17 220 2.9E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2782 76f65d574fc652ffa376466fb8e78ad9 234 Gene3D G3DSA:3.40.50.300 16 231 2.1E-60 T 12-10-2018 Acife_2782 76f65d574fc652ffa376466fb8e78ad9 234 Pfam PF13500 AAA domain 16 218 1.2E-41 T 12-10-2018 Acife_1017 87dac7b5946fb1a271a2e4e02440b6d8 211 Pfam PF00510 Cytochrome c oxidase subunit III 23 209 6.6E-11 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1017 87dac7b5946fb1a271a2e4e02440b6d8 211 SUPERFAMILY SSF81452 23 208 8.37E-34 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1017 87dac7b5946fb1a271a2e4e02440b6d8 211 Gene3D G3DSA:1.20.120.80 23 210 1.7E-34 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2523 b57709a47495cacfbaa70145b5d82844 190 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 170 6.5E-21 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Acife_2523 b57709a47495cacfbaa70145b5d82844 190 SMART SM00644 18 169 2.7E-33 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Acife_2523 b57709a47495cacfbaa70145b5d82844 190 SUPERFAMILY SSF55846 8 179 1.7E-53 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Acife_2523 b57709a47495cacfbaa70145b5d82844 190 Gene3D G3DSA:3.40.80.10 5 186 1.5E-49 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Acife_1437 59710a39ffda87708011ec25666d8feb 293 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 39 286 1.5E-41 T 12-10-2018 IPR017039 Virulence factor BrkB Acife_1437 59710a39ffda87708011ec25666d8feb 293 Pfam PF03631 Virulence factor BrkB 46 286 2.0E-45 T 12-10-2018 IPR017039 Virulence factor BrkB Acife_1437 59710a39ffda87708011ec25666d8feb 293 PIRSF PIRSF035875 19 291 6.7E-43 T 12-10-2018 IPR017039 Virulence factor BrkB Acife_2424 0abd02ba3c15a23bdf33a9999e0f8641 130 SUPERFAMILY SSF55718 2 129 3.53E-32 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Acife_2424 0abd02ba3c15a23bdf33a9999e0f8641 130 Gene3D G3DSA:3.30.1050.10 3 124 1.3E-23 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Acife_2424 0abd02ba3c15a23bdf33a9999e0f8641 130 Pfam PF02036 SCP-2 sterol transfer family 16 114 3.9E-15 T 12-10-2018 IPR003033 SCP2 sterol-binding domain Acife_2150 859f63ee35684c8c0654853c15a4f851 220 Pfam PF02666 Phosphatidylserine decarboxylase 46 211 3.7E-33 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Acife_2150 859f63ee35684c8c0654853c15a4f851 220 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 9 216 35.851 T 12-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Acife_2150 859f63ee35684c8c0654853c15a4f851 220 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 10 214 1.3E-61 T 12-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Acife_1794 f17941deba65d8fc95969adec171c11d 138 Pfam PF04241 Protein of unknown function (DUF423) 31 118 3.4E-22 T 12-10-2018 IPR006696 Protein of unknown function DUF423 Acife_2183 4243eb9a484367b019ef7ccab2fe9014 81 Pfam PF09720 Putative addiction module component 23 73 1.6E-9 T 12-10-2018 IPR013406 Conserved hypothetical protein CHP02574, addiction module Acife_0012 056c438afe336e4c792c7d9c5ae8a912 145 Pfam PF04361 Protein of unknown function (DUF494) 4 145 2.7E-35 T 12-10-2018 IPR007456 Smg Acife_0012 056c438afe336e4c792c7d9c5ae8a912 145 Hamap MF_00598 Protein Smg [smg]. 4 145 16.14 T 12-10-2018 IPR007456 Smg Acife_0376 4bd7873cd9eaf010b70583c836074b2a 260 Pfam PF13391 HNH endonuclease 154 207 2.2E-7 T 12-10-2018 IPR003615 HNH nuclease Acife_0697 5b4627125d43990dbd083dc453a04658 68 Gene3D G3DSA:3.30.70.100 4 67 8.1E-24 T 12-10-2018 Acife_0697 5b4627125d43990dbd083dc453a04658 68 SUPERFAMILY SSF55008 3 66 9.42E-19 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Acife_0697 5b4627125d43990dbd083dc453a04658 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Acife_0697 5b4627125d43990dbd083dc453a04658 68 Pfam PF00403 Heavy-metal-associated domain 7 63 5.8E-14 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Acife_2230 870248ddf57e755ec68e5e469e52aa92 267 SUPERFAMILY SSF52540 25 224 1.88E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2230 870248ddf57e755ec68e5e469e52aa92 267 Pfam PF07728 AAA domain (dynein-related subfamily) 36 169 1.1E-32 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Acife_2230 870248ddf57e755ec68e5e469e52aa92 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 182 265 5.5E-32 T 12-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Acife_2230 870248ddf57e755ec68e5e469e52aa92 267 Gene3D G3DSA:3.40.50.300 19 187 1.1E-29 T 12-10-2018 Acife_1479 8fe86256b43466d5891cdd96824c510a 261 Pfam PF13280 WYL domain 170 258 7.2E-15 T 12-10-2018 IPR026881 WYL domain Acife_1479 8fe86256b43466d5891cdd96824c510a 261 SUPERFAMILY SSF46785 32 94 2.54E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1479 8fe86256b43466d5891cdd96824c510a 261 Gene3D G3DSA:1.10.10.10 25 96 6.3E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1479 8fe86256b43466d5891cdd96824c510a 261 Pfam PF08279 HTH domain 38 91 3.7E-17 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Acife_0870 5f6a33d5938fca3d7f82f1b24f3f9d4f 661 Gene3D G3DSA:1.10.443.10 324 521 1.3E-5 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_0870 5f6a33d5938fca3d7f82f1b24f3f9d4f 661 SUPERFAMILY SSF56349 331 512 4.41E-8 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_1408 abe7f4b0d413bd09537e652f90e0caac 283 Pfam PF13098 Thioredoxin-like domain 134 260 2.8E-12 T 12-10-2018 IPR012336 Thioredoxin-like fold Acife_1408 abe7f4b0d413bd09537e652f90e0caac 283 SUPERFAMILY SSF52833 127 262 4.17E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1408 abe7f4b0d413bd09537e652f90e0caac 283 Gene3D G3DSA:3.40.30.10 134 276 1.6E-28 T 12-10-2018 Acife_1408 abe7f4b0d413bd09537e652f90e0caac 283 Gene3D G3DSA:3.10.450.70 44 108 3.3E-9 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Acife_0422 c0b54b6fe4e49da35170a8ff976f0369 155 Gene3D G3DSA:1.10.530.10 15 150 1.0E-6 T 12-10-2018 Acife_0422 c0b54b6fe4e49da35170a8ff976f0369 155 Pfam PF01464 Transglycosylase SLT domain 17 121 2.3E-6 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Acife_0422 c0b54b6fe4e49da35170a8ff976f0369 155 SUPERFAMILY SSF53955 13 133 9.78E-22 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Acife_0127 f2e38807662e4897e4fc37c2a69fb1c7 99 Gene3D G3DSA:1.10.260.40 35 99 8.3E-19 T 12-10-2018 Acife_0127 f2e38807662e4897e4fc37c2a69fb1c7 99 Pfam PF01381 Helix-turn-helix 37 72 2.8E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_0127 f2e38807662e4897e4fc37c2a69fb1c7 99 SUPERFAMILY SSF47413 37 80 4.02E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_2040 692aba57dabda986694a343776e9dcc9 486 SUPERFAMILY SSF51412 4 476 1.13E-122 T 12-10-2018 Acife_2040 692aba57dabda986694a343776e9dcc9 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 485 83.64 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Acife_2040 692aba57dabda986694a343776e9dcc9 486 PIRSF PIRSF000130 1 486 9.5E-201 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Acife_2040 692aba57dabda986694a343776e9dcc9 486 SMART SM00116 156 204 6.3E-6 T 12-10-2018 IPR000644 CBS domain Acife_2040 692aba57dabda986694a343776e9dcc9 486 SMART SM00116 95 142 3.9E-12 T 12-10-2018 IPR000644 CBS domain Acife_2040 692aba57dabda986694a343776e9dcc9 486 Gene3D G3DSA:3.20.20.70 1 485 2.3E-211 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2040 692aba57dabda986694a343776e9dcc9 486 SUPERFAMILY SSF54631 93 203 4.55E-28 T 12-10-2018 Acife_2040 692aba57dabda986694a343776e9dcc9 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Acife_2040 692aba57dabda986694a343776e9dcc9 486 SMART SM01240 6 472 0.0 T 12-10-2018 Acife_2040 692aba57dabda986694a343776e9dcc9 486 Pfam PF00571 CBS domain 147 204 5.6E-6 T 12-10-2018 IPR000644 CBS domain Acife_2040 692aba57dabda986694a343776e9dcc9 486 Pfam PF00571 CBS domain 94 138 1.8E-10 T 12-10-2018 IPR000644 CBS domain Acife_2040 692aba57dabda986694a343776e9dcc9 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 472 1.8E-161 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Acife_2040 692aba57dabda986694a343776e9dcc9 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 453 2.6E-190 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Acife_0117 57da0f833cebed311e6f472e7bf4cd87 305 PIRSF PIRSF026649 1 305 9.3E-83 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Acife_0117 57da0f833cebed311e6f472e7bf4cd87 305 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 17 295 4.1E-54 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Acife_0949 0adc06128ac33ece44454b486d5ca9e6 446 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 103 310 1.8E-39 T 12-10-2018 IPR000477 Reverse transcriptase domain Acife_0949 0adc06128ac33ece44454b486d5ca9e6 446 Pfam PF08388 Group II intron, maturase-specific domain 325 400 4.9E-14 T 12-10-2018 IPR013597 Group II intron, maturase-specific Acife_0949 0adc06128ac33ece44454b486d5ca9e6 446 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 47 389 2.1E-120 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase Acife_0949 0adc06128ac33ece44454b486d5ca9e6 446 SUPERFAMILY SSF56672 54 399 1.21E-50 T 12-10-2018 Acife_0813 a79d5a3fd59eab04579566cb20c3170c 248 Pfam PF01292 Prokaryotic cytochrome b561 14 199 1.3E-22 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Acife_0813 a79d5a3fd59eab04579566cb20c3170c 248 SUPERFAMILY SSF81342 13 205 2.43E-28 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Acife_0813 a79d5a3fd59eab04579566cb20c3170c 248 Gene3D G3DSA:1.20.950.20 4 188 5.0E-33 T 12-10-2018 Acife_1085 2b7ee78c2ec66fc379a20a8e12b109d9 532 Gene3D G3DSA:1.20.1740.10 6 461 1.1E-58 T 12-10-2018 Acife_1085 2b7ee78c2ec66fc379a20a8e12b109d9 532 Pfam PF13520 Amino acid permease 12 460 3.7E-32 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Acife_1085 2b7ee78c2ec66fc379a20a8e12b109d9 532 PIRSF PIRSF006060 1 455 1.9E-60 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Acife_1085 2b7ee78c2ec66fc379a20a8e12b109d9 532 PIRSF PIRSF006060 424 514 57.0 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Acife_2413 ba96666dff212a1592248dc754fb3188 141 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Acife_2413 ba96666dff212a1592248dc754fb3188 141 Pfam PF00085 Thioredoxin 39 137 1.4E-28 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 Acife_2413 ba96666dff212a1592248dc754fb3188 141 PRINTS PR00421 Thioredoxin family signature 64 73 4.3E-9 T 12-10-2018 Acife_2413 ba96666dff212a1592248dc754fb3188 141 PRINTS PR00421 Thioredoxin family signature 104 115 4.3E-9 T 12-10-2018 Acife_2413 ba96666dff212a1592248dc754fb3188 141 PRINTS PR00421 Thioredoxin family signature 56 64 4.3E-9 T 12-10-2018 Acife_2413 ba96666dff212a1592248dc754fb3188 141 PIRSF PIRSF000077 35 139 2.8E-31 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Acife_2413 ba96666dff212a1592248dc754fb3188 141 Gene3D G3DSA:3.40.30.10 32 138 2.5E-30 T 12-10-2018 Acife_2413 ba96666dff212a1592248dc754fb3188 141 SUPERFAMILY SSF52833 24 138 1.98E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2413 ba96666dff212a1592248dc754fb3188 141 TIGRFAM TIGR01068 thioredoxin: thioredoxin 42 137 5.0E-32 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Acife_2413 ba96666dff212a1592248dc754fb3188 141 Gene3D G3DSA:2.20.28.140 1 31 1.1E-13 T 12-10-2018 Acife_1637 b6bd20a1744929b67513bc4ae9dbe4c6 122 SUPERFAMILY SSF89360 1 95 9.61E-30 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Acife_1637 b6bd20a1744929b67513bc4ae9dbe4c6 122 Gene3D G3DSA:2.60.300.12 1 107 3.4E-35 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Acife_1637 b6bd20a1744929b67513bc4ae9dbe4c6 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 105 2.5E-36 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Acife_1637 b6bd20a1744929b67513bc4ae9dbe4c6 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 101 1.2E-21 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Acife_1637 b6bd20a1744929b67513bc4ae9dbe4c6 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 87 104 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Acife_2309 f42f0ab90c90d36bf58e88e93597c3d3 194 Pfam PF04055 Radical SAM superfamily 27 89 2.9E-7 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_2309 f42f0ab90c90d36bf58e88e93597c3d3 194 Gene3D G3DSA:3.20.20.70 5 173 2.7E-26 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2309 f42f0ab90c90d36bf58e88e93597c3d3 194 PIRSF PIRSF000368 2 169 2.8E-37 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 Acife_2309 f42f0ab90c90d36bf58e88e93597c3d3 194 SUPERFAMILY SSF102114 27 102 1.09E-8 T 12-10-2018 Acife_2309 f42f0ab90c90d36bf58e88e93597c3d3 194 Pfam PF13353 4Fe-4S single cluster domain 16 152 2.6E-27 T 12-10-2018 Acife_2029 f4deaff8e3e7337cbe277ee24e222f68 167 PIRSF PIRSF019345 1 167 1.2E-44 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Acife_2029 f4deaff8e3e7337cbe277ee24e222f68 167 Gene3D G3DSA:1.10.10.10 1 76 2.8E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2029 f4deaff8e3e7337cbe277ee24e222f68 167 SUPERFAMILY SSF46785 78 152 2.39E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2029 f4deaff8e3e7337cbe277ee24e222f68 167 Gene3D G3DSA:1.10.10.10 77 166 1.0E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2029 f4deaff8e3e7337cbe277ee24e222f68 167 Pfam PF04079 Segregation and condensation complex subunit ScpB 5 160 8.2E-40 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Acife_2029 f4deaff8e3e7337cbe277ee24e222f68 167 SUPERFAMILY SSF46785 5 74 5.98E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2029 f4deaff8e3e7337cbe277ee24e222f68 167 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 5 165 4.6E-28 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Acife_2743 46e068c20d29614a4701801f5b098e7c 209 SUPERFAMILY SSF53056 4 208 1.96E-61 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Acife_2743 46e068c20d29614a4701801f5b098e7c 209 SMART SM00947 33 199 1.8E-56 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Acife_2743 46e068c20d29614a4701801f5b098e7c 209 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 45 52 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Acife_2743 46e068c20d29614a4701801f5b098e7c 209 Pfam PF00484 Carbonic anhydrase 41 194 2.0E-46 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Acife_2743 46e068c20d29614a4701801f5b098e7c 209 Gene3D G3DSA:3.40.1050.10 1 208 3.6E-69 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Acife_0181 dcd66319fc1a351822fdc4e6993181d1 505 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 27 486 2.2E-175 T 12-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_0181 dcd66319fc1a351822fdc4e6993181d1 505 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 171 9.1E-32 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_0181 dcd66319fc1a351822fdc4e6993181d1 505 Gene3D G3DSA:3.60.120.10 2 495 6.0E-185 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Acife_0181 dcd66319fc1a351822fdc4e6993181d1 505 PRINTS PR00095 Anthranilate synthase component I signature 340 353 3.1E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_0181 dcd66319fc1a351822fdc4e6993181d1 505 PRINTS PR00095 Anthranilate synthase component I signature 420 434 3.1E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_0181 dcd66319fc1a351822fdc4e6993181d1 505 PRINTS PR00095 Anthranilate synthase component I signature 326 339 3.1E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_0181 dcd66319fc1a351822fdc4e6993181d1 505 PRINTS PR00095 Anthranilate synthase component I signature 435 449 3.1E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_0181 dcd66319fc1a351822fdc4e6993181d1 505 SUPERFAMILY SSF56322 15 488 6.15E-162 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Acife_0181 dcd66319fc1a351822fdc4e6993181d1 505 Pfam PF00425 chorismate binding enzyme 224 478 5.9E-102 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Acife_1831 b67ad208466f3df4e205c90850d600ec 152 Gene3D G3DSA:1.10.10.10 95 143 1.3E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1831 b67ad208466f3df4e205c90850d600ec 152 Gene3D G3DSA:1.10.10.10 54 94 2.2E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1831 b67ad208466f3df4e205c90850d600ec 152 Gene3D G3DSA:1.10.10.10 6 53 1.0E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1831 b67ad208466f3df4e205c90850d600ec 152 Hamap MF_01114 Regulatory protein RecX [recX]. 3 147 12.902 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Acife_1831 b67ad208466f3df4e205c90850d600ec 152 Pfam PF02631 RecX family 32 142 9.2E-25 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Acife_1571 a980fd315ad0513fb393cc48345f2a6f 131 SUPERFAMILY SSF88723 1 116 7.57E-14 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_1571 a980fd315ad0513fb393cc48345f2a6f 131 Pfam PF01850 PIN domain 4 116 2.5E-5 T 12-10-2018 IPR002716 PIN domain Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SUPERFAMILY SSF48452 369 544 1.4E-31 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SUPERFAMILY SSF48452 57 330 2.98E-30 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SMART SM00028 406 439 0.49 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SMART SM00028 440 474 19.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SMART SM00028 509 542 0.18 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SMART SM00028 101 134 150.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SMART SM00028 305 340 44.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SMART SM00028 169 202 16.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SMART SM00028 237 270 28.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SMART SM00028 271 304 18.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SMART SM00028 372 405 220.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 SMART SM00028 475 508 9.1 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 Pfam PF14559 Tetratricopeptide repeat 488 547 1.3E-8 T 12-10-2018 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 Pfam PF14559 Tetratricopeptide repeat 114 175 6.4E-10 T 12-10-2018 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 Pfam PF13432 Tetratricopeptide repeat 282 330 1.6E-6 T 12-10-2018 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 Pfam PF13432 Tetratricopeptide repeat 410 475 3.7E-8 T 12-10-2018 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 Gene3D G3DSA:1.25.40.10 30 332 1.4E-44 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0547 6a993d56ebddb5a8af4bf2744769c955 553 Gene3D G3DSA:1.25.40.10 333 552 7.0E-41 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1713 ab22af7e30026a55e738db139c0e16bd 238 Pfam PF01988 VIT family 23 230 1.2E-53 T 12-10-2018 IPR008217 Ccc1 family Acife_2974 e717267a3b2614d1be55eebe51135451 170 Gene3D G3DSA:1.10.530.10 24 146 5.2E-12 T 12-10-2018 Acife_2974 e717267a3b2614d1be55eebe51135451 170 SUPERFAMILY SSF53955 24 127 4.44E-18 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Acife_2974 e717267a3b2614d1be55eebe51135451 170 Pfam PF01464 Transglycosylase SLT domain 26 126 1.3E-11 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Acife_1873 b3926a54fe2918a0b79c8491594acdce 127 Pfam PF04241 Protein of unknown function (DUF423) 22 109 3.1E-30 T 12-10-2018 IPR006696 Protein of unknown function DUF423 Acife_3275 b4228e0d5ea176b9e7577849503a172a 337 Pfam PF01136 Peptidase family U32 82 336 5.0E-58 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Acife_3275 b4228e0d5ea176b9e7577849503a172a 337 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Acife_1741 8ffe29f025bdba9a49f76053fa07bf7f 363 SUPERFAMILY SSF54373 215 300 4.32E-19 T 12-10-2018 Acife_1741 8ffe29f025bdba9a49f76053fa07bf7f 363 SUPERFAMILY SSF51905 9 357 7.64E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1741 8ffe29f025bdba9a49f76053fa07bf7f 363 Gene3D G3DSA:3.50.50.60 10 341 2.7E-84 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1741 8ffe29f025bdba9a49f76053fa07bf7f 363 Pfam PF01266 FAD dependent oxidoreductase 10 340 2.9E-65 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Acife_1741 8ffe29f025bdba9a49f76053fa07bf7f 363 Gene3D G3DSA:3.30.9.10 96 301 2.7E-84 T 12-10-2018 Acife_0415 92507ffcc6ce1a045aed0203b5822d5f 100 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 99 1.2E-26 T 12-10-2018 IPR031451 mRNA interferase toxin MqsR GO:0009372|GO:0017148|GO:0044010 Acife_0415 92507ffcc6ce1a045aed0203b5822d5f 100 Gene3D G3DSA:3.30.2310.40 1 100 7.4E-29 T 12-10-2018 IPR038493 Toxin MqsR superfamily Acife_0407 5fa3bbd013065b7763005d97619b9ed3 495 SUPERFAMILY SSF110849 60 120 1.41E-8 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Acife_0407 5fa3bbd013065b7763005d97619b9ed3 495 Pfam PF02195 ParB-like nuclease domain 61 120 5.7E-5 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Acife_0390 c5a06d9f37d248d0e76c7bc361da55ab 226 SUPERFAMILY SSF46785 3 84 3.71E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0390 c5a06d9f37d248d0e76c7bc361da55ab 226 Gene3D G3DSA:1.10.10.10 1 85 2.9E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0390 c5a06d9f37d248d0e76c7bc361da55ab 226 Pfam PF12840 Helix-turn-helix domain 9 61 7.9E-10 T 12-10-2018 Acife_0390 c5a06d9f37d248d0e76c7bc361da55ab 226 SMART SM00418 5 84 4.6E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 4 520 44.607 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 Gene3D G3DSA:3.40.50.1380 1 198 2.5E-85 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 Gene3D G3DSA:3.40.140.20 211 363 1.4E-58 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 SUPERFAMILY SSF53927 214 520 2.31E-125 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 Pfam PF02142 MGS-like domain 16 131 2.3E-24 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 Pfam PF01808 AICARFT/IMPCHase bienzyme 136 450 3.4E-116 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 PIRSF PIRSF000414 2 520 9.0E-209 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 SMART SM00851 16 131 9.6E-54 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 SMART SM00798 136 452 2.0E-191 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 Gene3D G3DSA:3.40.140.20 383 520 4.1E-56 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 6 520 1.3E-212 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Acife_1072 92c686c2ace07a7b83ffcf9d8274de4c 521 SUPERFAMILY SSF52335 4 195 4.58E-68 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Acife_2889 8fffc897fd8985de1e72be0d68b30181 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 188 4.7E-45 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Acife_2889 8fffc897fd8985de1e72be0d68b30181 201 PIRSF PIRSF000709 1 178 1.0E-8 T 12-10-2018 Acife_2889 8fffc897fd8985de1e72be0d68b30181 201 SUPERFAMILY SSF53254 6 191 7.07E-45 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Acife_2889 8fffc897fd8985de1e72be0d68b30181 201 Gene3D G3DSA:3.40.50.1240 1 193 7.6E-48 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Acife_2889 8fffc897fd8985de1e72be0d68b30181 201 SMART SM00855 5 150 8.2E-16 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Acife_0164 a6341f5223c88e5b6132afa03f3a4172 356 Pfam PF13310 Virulence protein RhuM family 73 324 1.1E-108 T 12-10-2018 IPR011204 Virulence protein RhuM-like Acife_0164 a6341f5223c88e5b6132afa03f3a4172 356 PIRSF PIRSF015268 7 348 3.0E-137 T 12-10-2018 IPR011204 Virulence protein RhuM-like Acife_2871 672615f165920c1d95d2d2e8ae34b424 303 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 14 295 1.2E-112 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Acife_2871 672615f165920c1d95d2d2e8ae34b424 303 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 45 272 5.6E-60 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Acife_2871 672615f165920c1d95d2d2e8ae34b424 303 SUPERFAMILY SSF53335 18 269 9.58E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2871 672615f165920c1d95d2d2e8ae34b424 303 PIRSF PIRSF037167 1 300 2.6E-106 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Acife_2871 672615f165920c1d95d2d2e8ae34b424 303 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Acife_2871 672615f165920c1d95d2d2e8ae34b424 303 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 278 8.6E-69 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Acife_2871 672615f165920c1d95d2d2e8ae34b424 303 Gene3D G3DSA:3.40.50.150 107 277 6.4E-50 T 12-10-2018 Acife_2871 672615f165920c1d95d2d2e8ae34b424 303 Pfam PF05175 Methyltransferase small domain 134 217 1.8E-17 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Acife_2871 672615f165920c1d95d2d2e8ae34b424 303 Gene3D G3DSA:1.10.8.10 17 106 8.2E-9 T 12-10-2018 Acife_1818 24f06969723597711c9da102a4fe8363 404 SUPERFAMILY SSF46548 285 391 5.23E-13 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Acife_1818 24f06969723597711c9da102a4fe8363 404 Pfam PF17179 4Fe-4S dicluster domain 295 389 4.9E-29 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_1818 24f06969723597711c9da102a4fe8363 404 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 375 386 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_1818 24f06969723597711c9da102a4fe8363 404 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 296 307 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_2746 2576f3b3c7af4c7935258c56f403dd5b 86 SUPERFAMILY SSF110324 2 81 1.12E-33 T 12-10-2018 Acife_2746 2576f3b3c7af4c7935258c56f403dd5b 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 5.1E-40 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2746 2576f3b3c7af4c7935258c56f403dd5b 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.8E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2746 2576f3b3c7af4c7935258c56f403dd5b 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.8E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2746 2576f3b3c7af4c7935258c56f403dd5b 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.8E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2746 2576f3b3c7af4c7935258c56f403dd5b 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2746 2576f3b3c7af4c7935258c56f403dd5b 86 Gene3D G3DSA:2.40.50.100 20 86 1.5E-29 T 12-10-2018 Acife_2746 2576f3b3c7af4c7935258c56f403dd5b 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 27.946 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2746 2576f3b3c7af4c7935258c56f403dd5b 86 Pfam PF01016 Ribosomal L27 protein 2 77 6.0E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2746 2576f3b3c7af4c7935258c56f403dd5b 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 70 5.0E-14 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2500 79bf994afd5e3584a39fdbaa6daa8e21 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 46 263 5.1E-68 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Acife_2500 79bf994afd5e3584a39fdbaa6daa8e21 388 Gene3D G3DSA:2.60.410.10 283 373 1.7E-18 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Acife_2500 79bf994afd5e3584a39fdbaa6daa8e21 388 SUPERFAMILY SSF69189 306 375 1.18E-14 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Acife_2500 79bf994afd5e3584a39fdbaa6daa8e21 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 286 373 7.7E-16 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Acife_2500 79bf994afd5e3584a39fdbaa6daa8e21 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 4.9E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Acife_2500 79bf994afd5e3584a39fdbaa6daa8e21 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 4.9E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Acife_2500 79bf994afd5e3584a39fdbaa6daa8e21 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 4.9E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Acife_2500 79bf994afd5e3584a39fdbaa6daa8e21 388 SMART SM00936 283 373 1.8E-15 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Acife_2500 79bf994afd5e3584a39fdbaa6daa8e21 388 SUPERFAMILY SSF56601 2 283 2.2E-71 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Acife_2500 79bf994afd5e3584a39fdbaa6daa8e21 388 Gene3D G3DSA:3.40.710.10 31 281 3.3E-79 T 12-10-2018 Acife_0700 613bacfd15d661700250d95416368e8b 325 Pfam PF13384 Homeodomain-like domain 105 131 1.3E-6 T 12-10-2018 Acife_0700 613bacfd15d661700250d95416368e8b 325 SMART SM01126 142 296 9.5E-41 T 12-10-2018 IPR024445 ISXO2-like transposase domain Acife_0700 613bacfd15d661700250d95416368e8b 325 SUPERFAMILY SSF144020 44 81 7.32E-5 T 12-10-2018 IPR024064 FdhE-like superfamily Acife_0700 613bacfd15d661700250d95416368e8b 325 Pfam PF12762 ISXO2-like transposase domain 142 291 2.5E-16 T 12-10-2018 IPR024445 ISXO2-like transposase domain Acife_1886 2b04642a89b1989a1b9babc73b62c7db 159 Gene3D G3DSA:1.20.1290.10 9 154 9.8E-43 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Acife_1886 2b04642a89b1989a1b9babc73b62c7db 159 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 34 83 2.5E-14 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Acife_1886 2b04642a89b1989a1b9babc73b62c7db 159 SUPERFAMILY SSF69118 12 152 1.7E-40 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Acife_1886 2b04642a89b1989a1b9babc73b62c7db 159 Pfam PF02627 Carboxymuconolactone decarboxylase family 18 99 8.2E-19 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Acife_1370 8e4374b37ab2cd00487731f406271a75 393 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.176 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Acife_1370 8e4374b37ab2cd00487731f406271a75 393 Gene3D G3DSA:3.30.1490.20 123 195 6.0E-32 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Acife_1370 8e4374b37ab2cd00487731f406271a75 393 Pfam PF02222 ATP-grasp domain 122 294 4.3E-53 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Acife_1370 8e4374b37ab2cd00487731f406271a75 393 Gene3D G3DSA:3.40.50.20 1 122 8.6E-50 T 12-10-2018 Acife_1370 8e4374b37ab2cd00487731f406271a75 393 Gene3D G3DSA:3.30.470.20 196 389 4.6E-60 T 12-10-2018 Acife_1370 8e4374b37ab2cd00487731f406271a75 393 SUPERFAMILY SSF56059 112 312 8.66E-56 T 12-10-2018 Acife_1370 8e4374b37ab2cd00487731f406271a75 393 SUPERFAMILY SSF52440 1 111 8.63E-32 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Acife_1370 8e4374b37ab2cd00487731f406271a75 393 SUPERFAMILY SSF51246 318 389 8.16E-18 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Acife_1370 8e4374b37ab2cd00487731f406271a75 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 390 2.0E-171 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Acife_2215 d2d41ea14b6ebd37954514b7a65af1f0 380 Pfam PF14827 Double sensory domain of two-component sensor kinase 40 287 5.6E-6 T 12-10-2018 IPR029150 Double Cache domain 3 Acife_2215 d2d41ea14b6ebd37954514b7a65af1f0 380 Gene3D G3DSA:1.20.1480.50 286 378 7.8E-9 T 12-10-2018 Acife_2215 d2d41ea14b6ebd37954514b7a65af1f0 380 SUPERFAMILY SSF103190 54 190 2.47E-11 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Acife_1282 7d9aa591e834e2d3a120f0ec35e7549c 490 ProSitePatterns PS00571 Amidases signature. 151 182 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Acife_1282 7d9aa591e834e2d3a120f0ec35e7549c 490 Pfam PF01425 Amidase 24 466 5.7E-164 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Acife_1282 7d9aa591e834e2d3a120f0ec35e7549c 490 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 477 3.8E-176 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Acife_1282 7d9aa591e834e2d3a120f0ec35e7549c 490 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 91.046 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Acife_1282 7d9aa591e834e2d3a120f0ec35e7549c 490 Gene3D G3DSA:3.90.1300.10 2 485 3.5E-206 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Acife_1282 7d9aa591e834e2d3a120f0ec35e7549c 490 SUPERFAMILY SSF75304 2 483 1.19E-168 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Acife_0170 07b4ee14257487260f5939d05c43b5ad 105 SUPERFAMILY SSF52833 6 104 4.25E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0170 07b4ee14257487260f5939d05c43b5ad 105 Gene3D G3DSA:3.40.30.10 6 105 2.1E-27 T 12-10-2018 Acife_0834 cc057679c9fcac97f2ffd1b315768a63 576 Gene3D G3DSA:3.40.50.300 15 121 5.8E-9 T 12-10-2018 Acife_0834 cc057679c9fcac97f2ffd1b315768a63 576 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 267 417 1.1E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_0834 cc057679c9fcac97f2ffd1b315768a63 576 SUPERFAMILY SSF52540 17 421 2.03E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0834 cc057679c9fcac97f2ffd1b315768a63 576 Gene3D G3DSA:3.40.50.300 284 441 1.4E-13 T 12-10-2018 Acife_0834 cc057679c9fcac97f2ffd1b315768a63 576 Pfam PF13175 AAA ATPase domain 19 72 4.6E-9 T 12-10-2018 Acife_0321 99db0bbe0cc0cfa924be85ed0d4dd779 277 Gene3D G3DSA:3.30.420.10 12 222 2.3E-19 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_0321 99db0bbe0cc0cfa924be85ed0d4dd779 277 SUPERFAMILY SSF53098 50 227 3.29E-32 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0321 99db0bbe0cc0cfa924be85ed0d4dd779 277 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 57 265 4.4E-80 T 12-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like Acife_3122 21c4d97e3ecb9a8495a78edea7dfccf3 86 SUPERFAMILY SSF47598 6 83 2.0E-20 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_3122 21c4d97e3ecb9a8495a78edea7dfccf3 86 Gene3D G3DSA:1.20.5.780 1 86 2.6E-21 T 12-10-2018 Acife_3122 21c4d97e3ecb9a8495a78edea7dfccf3 86 Pfam PF08681 Protein of unknown function (DUF1778) 9 85 7.2E-25 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Acife_0701 69d12a30f0d07e5995ac83b72d1cffcb 285 Pfam PF07690 Major Facilitator Superfamily 46 212 6.6E-10 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_0701 69d12a30f0d07e5995ac83b72d1cffcb 285 Gene3D G3DSA:1.20.1250.20 61 271 1.4E-21 T 12-10-2018 Acife_0701 69d12a30f0d07e5995ac83b72d1cffcb 285 SUPERFAMILY SSF103473 51 270 2.09E-24 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_2704 102d8abb603e209eeb656106ba1d3a09 220 SMART SM00322 59 124 3.9E-10 T 12-10-2018 IPR004087 K Homology domain GO:0003676 Acife_2704 102d8abb603e209eeb656106ba1d3a09 220 Gene3D G3DSA:3.30.1140.32 107 207 1.4E-43 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2704 102d8abb603e209eeb656106ba1d3a09 220 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 2.0E-91 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Acife_2704 102d8abb603e209eeb656106ba1d3a09 220 SUPERFAMILY SSF54814 2 105 1.36E-35 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Acife_2704 102d8abb603e209eeb656106ba1d3a09 220 SUPERFAMILY SSF54821 107 205 1.29E-39 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2704 102d8abb603e209eeb656106ba1d3a09 220 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2704 102d8abb603e209eeb656106ba1d3a09 220 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.093 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Acife_2704 102d8abb603e209eeb656106ba1d3a09 220 Pfam PF07650 KH domain 37 110 1.3E-19 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2704 102d8abb603e209eeb656106ba1d3a09 220 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 5.8E-39 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2704 102d8abb603e209eeb656106ba1d3a09 220 Gene3D G3DSA:3.30.300.20 17 106 1.6E-26 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Acife_1263 83a28be99326d04ac7a55999db124e17 158 PRINTS PR01438 Universal stress protein signature 132 154 1.5E-17 T 12-10-2018 IPR006015 Universal stress protein A Acife_1263 83a28be99326d04ac7a55999db124e17 158 PRINTS PR01438 Universal stress protein signature 10 28 1.5E-17 T 12-10-2018 IPR006015 Universal stress protein A Acife_1263 83a28be99326d04ac7a55999db124e17 158 PRINTS PR01438 Universal stress protein signature 114 126 1.5E-17 T 12-10-2018 IPR006015 Universal stress protein A Acife_1263 83a28be99326d04ac7a55999db124e17 158 Gene3D G3DSA:3.40.50.620 8 156 2.5E-35 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_1263 83a28be99326d04ac7a55999db124e17 158 Pfam PF00582 Universal stress protein family 10 154 4.6E-29 T 12-10-2018 IPR006016 UspA Acife_1263 83a28be99326d04ac7a55999db124e17 158 SUPERFAMILY SSF52402 10 156 2.93E-35 T 12-10-2018 Acife_1263 83a28be99326d04ac7a55999db124e17 158 PIRSF PIRSF006276 9 157 4.3E-17 T 12-10-2018 IPR006015 Universal stress protein A Acife_0667 5c1d244ff7d565696f42d2bdd279650a 937 Gene3D G3DSA:3.40.720.10 610 823 1.6E-7 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Acife_0667 5c1d244ff7d565696f42d2bdd279650a 937 Gene3D G3DSA:2.130.10.10 71 296 5.4E-12 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Acife_0667 5c1d244ff7d565696f42d2bdd279650a 937 Gene3D G3DSA:2.130.10.10 297 417 1.3E-9 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Acife_0667 5c1d244ff7d565696f42d2bdd279650a 937 SUPERFAMILY SSF50974 98 399 1.26E-25 T 12-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 Acife_0667 5c1d244ff7d565696f42d2bdd279650a 937 SUPERFAMILY SSF53649 512 798 7.33E-5 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Acife_2710 39b2385334f85dfabc9a1deabbe723a9 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site Acife_2710 39b2385334f85dfabc9a1deabbe723a9 210 SUPERFAMILY SSF50447 1 209 3.97E-78 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Acife_2710 39b2385334f85dfabc9a1deabbe723a9 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 38.619 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2710 39b2385334f85dfabc9a1deabbe723a9 210 Pfam PF00297 Ribosomal protein L3 78 183 5.6E-15 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2710 39b2385334f85dfabc9a1deabbe723a9 210 Gene3D G3DSA:2.40.30.10 130 210 3.0E-13 T 12-10-2018 Acife_2710 39b2385334f85dfabc9a1deabbe723a9 210 Gene3D G3DSA:2.40.50.620 33 96 1.5E-14 T 12-10-2018 Acife_2710 39b2385334f85dfabc9a1deabbe723a9 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 3.0E-86 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_1752 a0ca6358e26afeef32f7a0f5259fdd10 256 PIRSF PIRSF004976 8 247 6.6E-58 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Acife_1752 a0ca6358e26afeef32f7a0f5259fdd10 256 SUPERFAMILY SSF52402 12 218 4.63E-49 T 12-10-2018 Acife_1752 a0ca6358e26afeef32f7a0f5259fdd10 256 Gene3D G3DSA:3.40.50.620 10 247 2.7E-47 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_1752 a0ca6358e26afeef32f7a0f5259fdd10 256 Pfam PF01171 PP-loop family 34 198 1.2E-16 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Acife_2064 e59382f0396ff6d5abc11907cf88cb86 477 Pfam PF02321 Outer membrane efflux protein 288 467 1.4E-17 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_2064 e59382f0396ff6d5abc11907cf88cb86 477 Pfam PF02321 Outer membrane efflux protein 67 254 7.5E-11 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_2064 e59382f0396ff6d5abc11907cf88cb86 477 Gene3D G3DSA:2.20.200.10 103 354 2.1E-89 T 12-10-2018 Acife_2064 e59382f0396ff6d5abc11907cf88cb86 477 Gene3D G3DSA:1.20.1600.10 58 469 2.1E-89 T 12-10-2018 Acife_2064 e59382f0396ff6d5abc11907cf88cb86 477 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 469 6.0E-94 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Acife_2064 e59382f0396ff6d5abc11907cf88cb86 477 SUPERFAMILY SSF56954 1 471 1.96E-73 T 12-10-2018 Acife_2289 23f3d3b27e9b1763d6b2419e059c1a2a 150 Pfam PF09278 MerR, DNA binding 53 116 2.1E-16 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding Acife_2289 23f3d3b27e9b1763d6b2419e059c1a2a 150 Gene3D G3DSA:1.10.1660.10 2 137 4.3E-30 T 12-10-2018 Acife_2289 23f3d3b27e9b1763d6b2419e059c1a2a 150 SUPERFAMILY SSF46955 10 128 2.42E-28 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Acife_2289 23f3d3b27e9b1763d6b2419e059c1a2a 150 SMART SM00422 10 79 2.7E-23 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2289 23f3d3b27e9b1763d6b2419e059c1a2a 150 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 1.9E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2289 23f3d3b27e9b1763d6b2419e059c1a2a 150 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 1.9E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2289 23f3d3b27e9b1763d6b2419e059c1a2a 150 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 66 1.9E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2289 23f3d3b27e9b1763d6b2419e059c1a2a 150 Pfam PF00376 MerR family regulatory protein 11 48 1.9E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_2289 23f3d3b27e9b1763d6b2419e059c1a2a 150 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Acife_3262 b0cec87548d06b08d1ef694c245f19d4 217 SUPERFAMILY SSF51391 9 212 5.23E-56 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Acife_3262 b0cec87548d06b08d1ef694c245f19d4 217 Gene3D G3DSA:3.20.20.70 2 214 1.4E-54 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_3262 b0cec87548d06b08d1ef694c245f19d4 217 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 9 213 24.453 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Acife_3262 b0cec87548d06b08d1ef694c245f19d4 217 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 11 207 1.8E-53 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Acife_3262 b0cec87548d06b08d1ef694c245f19d4 217 Pfam PF02581 Thiamine monophosphate synthase 11 195 7.4E-49 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Acife_1581 dceeb0669f30fc60f82feef3656f9b80 57 Gene3D G3DSA:1.10.8.550 6 57 2.3E-17 T 12-10-2018 Acife_1581 dceeb0669f30fc60f82feef3656f9b80 57 Pfam PF08369 Proto-chlorophyllide reductase 57 kD subunit 8 51 1.7E-16 T 12-10-2018 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Acife_0309 911ad0fca4f6de6c79e86f55d51bc0a3 282 Hamap MF_00258 Glutamate racemase [murI]. 1 258 28.789 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Acife_0309 911ad0fca4f6de6c79e86f55d51bc0a3 282 SUPERFAMILY SSF53681 107 253 2.83E-20 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Acife_0309 911ad0fca4f6de6c79e86f55d51bc0a3 282 TIGRFAM TIGR00067 glut_race: glutamate racemase 3 215 2.4E-51 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Acife_0309 911ad0fca4f6de6c79e86f55d51bc0a3 282 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 213 2.2E-23 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Acife_0309 911ad0fca4f6de6c79e86f55d51bc0a3 282 Gene3D G3DSA:3.40.50.1860 92 205 4.3E-62 T 12-10-2018 Acife_0309 911ad0fca4f6de6c79e86f55d51bc0a3 282 Gene3D G3DSA:3.40.50.1860 3 217 4.3E-62 T 12-10-2018 Acife_0309 911ad0fca4f6de6c79e86f55d51bc0a3 282 SUPERFAMILY SSF53681 1 100 1.63E-29 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Acife_0309 911ad0fca4f6de6c79e86f55d51bc0a3 282 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 67 75 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Acife_1867 329314f0f1be94de9a067149d7a4298a 184 SUPERFAMILY SSF81452 25 183 6.15E-7 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1867 329314f0f1be94de9a067149d7a4298a 184 Gene3D G3DSA:1.20.120.80 18 184 6.2E-12 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1076 4876b8b477846df296baae2b281796ba 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 473 483 1.7E-24 T 12-10-2018 Acife_1076 4876b8b477846df296baae2b281796ba 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 526 545 1.7E-24 T 12-10-2018 Acife_1076 4876b8b477846df296baae2b281796ba 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 158 172 1.7E-24 T 12-10-2018 Acife_1076 4876b8b477846df296baae2b281796ba 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 549 561 1.7E-24 T 12-10-2018 Acife_1076 4876b8b477846df296baae2b281796ba 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 316 330 1.7E-24 T 12-10-2018 Acife_1076 4876b8b477846df296baae2b281796ba 689 Gene3D G3DSA:3.40.1110.10 327 456 3.7E-43 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Acife_1076 4876b8b477846df296baae2b281796ba 689 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 382 611 6.1E-44 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_1076 4876b8b477846df296baae2b281796ba 689 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 77 337 2.8E-28 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Acife_1076 4876b8b477846df296baae2b281796ba 689 SUPERFAMILY SSF81665 33 310 3.01E-10 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Acife_1076 4876b8b477846df296baae2b281796ba 689 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 318 324 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Acife_1076 4876b8b477846df296baae2b281796ba 689 SUPERFAMILY SSF56784 304 569 6.07E-35 T 12-10-2018 IPR036412 HAD-like superfamily Acife_1076 4876b8b477846df296baae2b281796ba 689 Pfam PF00702 haloacid dehalogenase-like hydrolase 313 540 1.8E-32 T 12-10-2018 Acife_1076 4876b8b477846df296baae2b281796ba 689 Gene3D G3DSA:3.40.50.1000 457 576 7.1E-24 T 12-10-2018 IPR023214 HAD superfamily Acife_1076 4876b8b477846df296baae2b281796ba 689 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 20 686 1.4E-296 T 12-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Acife_1076 4876b8b477846df296baae2b281796ba 689 Gene3D G3DSA:2.70.150.20 109 215 1.7E-24 T 12-10-2018 Acife_1076 4876b8b477846df296baae2b281796ba 689 SUPERFAMILY SSF81653 117 211 2.62E-20 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Acife_1076 4876b8b477846df296baae2b281796ba 689 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 13 689 38.14 T 12-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Acife_1076 4876b8b477846df296baae2b281796ba 689 Pfam PF00122 E1-E2 ATPase 113 294 1.8E-32 T 12-10-2018 Acife_1961 aa02430fccb90120cb8e3d6df2b6369b 40 Gene3D G3DSA:4.10.520.10 1 40 9.7E-14 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_1961 aa02430fccb90120cb8e3d6df2b6369b 40 PRINTS PR01727 Prokaryotic integration host factor signature 7 20 5.0E-6 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1961 aa02430fccb90120cb8e3d6df2b6369b 40 PRINTS PR01727 Prokaryotic integration host factor signature 23 37 5.0E-6 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1961 aa02430fccb90120cb8e3d6df2b6369b 40 Pfam PF00216 Bacterial DNA-binding protein 2 39 6.3E-12 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_1961 aa02430fccb90120cb8e3d6df2b6369b 40 SUPERFAMILY SSF47729 2 39 1.62E-10 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_0869 6c1b01a6f3e7c297e97b15f350cc2302 410 Gene3D G3DSA:1.10.150.130 33 134 8.5E-7 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_0869 6c1b01a6f3e7c297e97b15f350cc2302 410 SUPERFAMILY SSF56349 45 392 3.24E-18 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_0869 6c1b01a6f3e7c297e97b15f350cc2302 410 Pfam PF00589 Phage integrase family 197 390 9.9E-8 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_0869 6c1b01a6f3e7c297e97b15f350cc2302 410 Gene3D G3DSA:1.10.443.10 161 394 6.3E-22 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_2302 da2e06b33f71eea9154a4b3b999d299a 302 Pfam PF13276 HTH-like domain 47 104 8.1E-16 T 12-10-2018 IPR025948 HTH-like domain Acife_2302 da2e06b33f71eea9154a4b3b999d299a 302 Pfam PF00665 Integrase core domain 128 244 9.1E-29 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_2302 da2e06b33f71eea9154a4b3b999d299a 302 Gene3D G3DSA:3.30.420.10 125 276 1.3E-12 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_2302 da2e06b33f71eea9154a4b3b999d299a 302 SUPERFAMILY SSF53098 122 286 1.97E-38 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_2138 038961e5903356fc09eb450b1f0d532a 434 SUPERFAMILY SSF56954 2 429 6.15E-55 T 12-10-2018 Acife_2138 038961e5903356fc09eb450b1f0d532a 434 Pfam PF02321 Outer membrane efflux protein 243 422 1.1E-20 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_2138 038961e5903356fc09eb450b1f0d532a 434 Pfam PF02321 Outer membrane efflux protein 34 213 2.7E-17 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_2138 038961e5903356fc09eb450b1f0d532a 434 Gene3D G3DSA:1.20.1600.10 24 431 7.0E-50 T 12-10-2018 Acife_0635 89e6298361914c37fb13fd4b5ebb2d4e 253 SUPERFAMILY SSF64438 11 251 2.2E-80 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Acife_0635 89e6298361914c37fb13fd4b5ebb2d4e 253 Gene3D G3DSA:3.60.140.10 1 252 7.2E-89 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Acife_0635 89e6298361914c37fb13fd4b5ebb2d4e 253 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 27 249 1.6E-74 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Acife_0635 89e6298361914c37fb13fd4b5ebb2d4e 253 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 32 249 9.9E-58 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Acife_1275 32a936f6e665564426acd4793d7efe76 291 Pfam PF04794 YdjC-like protein 8 276 2.4E-59 T 12-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like Acife_1275 32a936f6e665564426acd4793d7efe76 291 SUPERFAMILY SSF88713 7 288 2.89E-69 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Acife_1275 32a936f6e665564426acd4793d7efe76 291 Gene3D G3DSA:3.20.20.370 6 289 8.9E-55 T 12-10-2018 Acife_1275 32a936f6e665564426acd4793d7efe76 291 TIGRFAM TIGR03473 HpnK: hopanoid biosynthesis associated protein HpnK 7 288 4.9E-132 T 12-10-2018 IPR017836 Hopanoid biosynthesis associated protein HpnK Acife_2482 6ce1fc5c7898c4ee0730231c1cea30f3 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 105 116 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_2482 6ce1fc5c7898c4ee0730231c1cea30f3 230 Gene3D G3DSA:3.30.70.20 1 230 2.8E-68 T 12-10-2018 Acife_2482 6ce1fc5c7898c4ee0730231c1cea30f3 230 Pfam PF13247 4Fe-4S dicluster domain 67 166 1.2E-23 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_2482 6ce1fc5c7898c4ee0730231c1cea30f3 230 SUPERFAMILY SSF54862 1 202 4.81E-67 T 12-10-2018 Acife_2836 0b9796c8e990402518ec3a3e680d0d9f 260 Gene3D G3DSA:3.20.20.370 35 238 1.9E-47 T 12-10-2018 Acife_2836 0b9796c8e990402518ec3a3e680d0d9f 260 Pfam PF01522 Polysaccharide deacetylase 46 165 4.8E-26 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Acife_2836 0b9796c8e990402518ec3a3e680d0d9f 260 SUPERFAMILY SSF88713 44 237 1.5E-47 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Acife_0570 737392dc0d1e313df69f53b76a551de3 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 32.398 T 12-10-2018 IPR023065 Uncharacterised protein family ApaG Acife_0570 737392dc0d1e313df69f53b76a551de3 127 Gene3D G3DSA:2.60.40.1470 2 127 8.7E-50 T 12-10-2018 IPR036767 ApaG domain superfamily Acife_0570 737392dc0d1e313df69f53b76a551de3 127 Pfam PF04379 ApaG domain 19 104 7.4E-36 T 12-10-2018 IPR007474 ApaG domain Acife_0570 737392dc0d1e313df69f53b76a551de3 127 SUPERFAMILY SSF110069 7 127 2.49E-47 T 12-10-2018 IPR036767 ApaG domain superfamily Acife_0698 998b4c20bbc6ae089095c1fc6e5f328d 81 SUPERFAMILY SSF52833 4 67 8.39E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0698 998b4c20bbc6ae089095c1fc6e5f328d 81 Pfam PF00462 Glutaredoxin 5 61 1.8E-13 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Acife_0698 998b4c20bbc6ae089095c1fc6e5f328d 81 Gene3D G3DSA:3.40.30.10 4 77 3.4E-14 T 12-10-2018 Acife_0945 6dd692dc1f69666fcd7b07393079654e 71 Gene3D G3DSA:3.30.920.30 7 69 4.5E-18 T 12-10-2018 IPR038570 HicA superfamily Acife_0945 6dd692dc1f69666fcd7b07393079654e 71 SUPERFAMILY SSF54786 5 69 1.49E-16 T 12-10-2018 Acife_0945 6dd692dc1f69666fcd7b07393079654e 71 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 11 62 2.4E-18 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Acife_1887 ab2c4a034d65855a6708e45dc342bc35 155 Pfam PF01047 MarR family 48 100 6.0E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Acife_1887 ab2c4a034d65855a6708e45dc342bc35 155 SUPERFAMILY SSF46785 23 152 9.97E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1887 ab2c4a034d65855a6708e45dc342bc35 155 Gene3D G3DSA:1.10.10.10 12 155 3.4E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1887 ab2c4a034d65855a6708e45dc342bc35 155 SMART SM00347 41 141 1.2E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Acife_2884 99cee9d85602ddab86746d6f77eda22e 153 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 146 5.1E-56 T 12-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 Acife_2884 99cee9d85602ddab86746d6f77eda22e 153 Pfam PF02470 MlaD protein 38 116 1.7E-20 T 12-10-2018 IPR003399 Mce/MlaD Acife_1835 1e1f47c22c89e1953ba53efa094230b5 340 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 142 2.4E-23 T 12-10-2018 IPR016188 PurM-like, N-terminal domain Acife_1835 1e1f47c22c89e1953ba53efa094230b5 340 PIRSF PIRSF005303 1 328 1.0E-82 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Acife_1835 1e1f47c22c89e1953ba53efa094230b5 340 Gene3D G3DSA:3.30.1330.10 2 145 3.7E-42 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Acife_1835 1e1f47c22c89e1953ba53efa094230b5 340 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 312 1.9E-88 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Acife_1835 1e1f47c22c89e1953ba53efa094230b5 340 Gene3D G3DSA:3.90.650.10 149 337 1.7E-39 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Acife_1835 1e1f47c22c89e1953ba53efa094230b5 340 Pfam PF02769 AIR synthase related protein, C-terminal domain 153 309 7.6E-11 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Acife_1835 1e1f47c22c89e1953ba53efa094230b5 340 SUPERFAMILY SSF55326 7 143 6.58E-33 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Acife_1835 1e1f47c22c89e1953ba53efa094230b5 340 SUPERFAMILY SSF56042 147 311 1.27E-28 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Acife_1835 1e1f47c22c89e1953ba53efa094230b5 340 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 339 26.06 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Acife_3264 42f5e0d641b565323909a8fd861882eb 151 Pfam PF03703 Bacterial PH domain 72 127 4.0E-6 T 12-10-2018 IPR005182 Domain of unknown function DUF304 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 SUPERFAMILY SSF55424 347 460 5.84E-25 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 4.1E-51 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PIRSF PIRSF000350 2 461 6.6E-65 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 Gene3D G3DSA:3.50.50.60 149 274 3.2E-86 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 3.7E-23 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 3.7E-23 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.7E-23 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 3.7E-23 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 3.7E-23 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 2.7E-52 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 2.7E-52 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 2.7E-52 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.7E-52 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 2.7E-52 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 2.7E-52 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 2.7E-52 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.7E-52 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 2.7E-52 T 12-10-2018 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 Gene3D G3DSA:3.50.50.60 7 325 3.2E-86 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1430 4258346669bccb7cfc9c0728e823321e 462 Gene3D G3DSA:3.30.390.30 347 462 1.7E-26 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Acife_1430 4258346669bccb7cfc9c0728e823321e 462 SUPERFAMILY SSF51905 4 372 2.66E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_1430 4258346669bccb7cfc9c0728e823321e 462 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 457 3.3E-17 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Acife_2037 6b3a87eaed2214c72212ed86772c5f86 783 SUPERFAMILY SSF82689 663 765 6.54E-13 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Acife_2037 6b3a87eaed2214c72212ed86772c5f86 783 Pfam PF00924 Mechanosensitive ion channel 553 753 1.2E-45 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Acife_2037 6b3a87eaed2214c72212ed86772c5f86 783 SUPERFAMILY SSF50182 594 659 4.58E-18 T 12-10-2018 IPR010920 LSM domain superfamily Acife_2037 6b3a87eaed2214c72212ed86772c5f86 783 SUPERFAMILY SSF82861 510 593 2.88E-10 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Acife_2037 6b3a87eaed2214c72212ed86772c5f86 783 Gene3D G3DSA:2.30.30.60 610 659 4.3E-14 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Acife_2037 6b3a87eaed2214c72212ed86772c5f86 783 Gene3D G3DSA:3.30.70.100 662 759 3.3E-8 T 12-10-2018 Acife_0476 7e1700ae2746ee2d1627aa601def458e 567 SUPERFAMILY SSF53098 367 509 1.52E-10 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0476 7e1700ae2746ee2d1627aa601def458e 567 Pfam PF01609 Transposase DDE domain 224 496 9.2E-13 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Acife_1327 b24701b13b4493f11531f24e89de9322 498 SUPERFAMILY SSF52540 8 231 1.46E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1327 b24701b13b4493f11531f24e89de9322 498 SMART SM00382 269 430 1.2 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1327 b24701b13b4493f11531f24e89de9322 498 SMART SM00382 27 194 1.3 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1327 b24701b13b4493f11531f24e89de9322 498 Gene3D G3DSA:3.40.50.300 244 484 1.8E-50 T 12-10-2018 Acife_1327 b24701b13b4493f11531f24e89de9322 498 Gene3D G3DSA:3.40.50.300 1 243 6.0E-43 T 12-10-2018 Acife_1327 b24701b13b4493f11531f24e89de9322 498 PIRSF PIRSF039117 1 486 9.4E-140 T 12-10-2018 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Acife_1327 b24701b13b4493f11531f24e89de9322 498 SUPERFAMILY SSF52540 250 469 2.26E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1327 b24701b13b4493f11531f24e89de9322 498 Pfam PF06745 KaiC 254 468 4.8E-41 T 12-10-2018 IPR014774 KaiC-like domain Acife_1327 b24701b13b4493f11531f24e89de9322 498 Pfam PF06745 KaiC 11 232 7.3E-33 T 12-10-2018 IPR014774 KaiC-like domain Acife_1629 cd79aeabd5941b761e9a0aeb43009bbd 76 Pfam PF09723 Zinc ribbon domain 1 38 4.0E-12 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Acife_1629 cd79aeabd5941b761e9a0aeb43009bbd 76 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 46 1.4E-14 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Acife_1629 cd79aeabd5941b761e9a0aeb43009bbd 76 SMART SM00834 1 40 1.5E-13 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Acife_0884 18a179cf10f9f41505c6daf7bccc3c15 397 SMART SM00974 280 374 1.7E-23 T 12-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding Acife_0884 18a179cf10f9f41505c6daf7bccc3c15 397 Pfam PF10544 T5orf172 domain 264 375 3.0E-12 T 12-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding Acife_0978 2aba6ef7523d2ba227ff0feb2e1ee2b8 300 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 13 288 1.6E-95 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Acife_0978 2aba6ef7523d2ba227ff0feb2e1ee2b8 300 Pfam PF01040 UbiA prenyltransferase family 30 274 8.6E-59 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Acife_0978 2aba6ef7523d2ba227ff0feb2e1ee2b8 300 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 69 91 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site Acife_0978 2aba6ef7523d2ba227ff0feb2e1ee2b8 300 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 7 289 27.475 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Acife_0978 2aba6ef7523d2ba227ff0feb2e1ee2b8 300 Gene3D G3DSA:1.20.120.1780 171 290 1.1E-14 T 12-10-2018 Acife_0978 2aba6ef7523d2ba227ff0feb2e1ee2b8 300 Gene3D G3DSA:1.10.357.140 25 170 8.6E-37 T 12-10-2018 Acife_2469 af121a4a596874169616f86331a0d006 131 Gene3D G3DSA:3.40.1260.10 3 131 1.2E-30 T 12-10-2018 IPR027396 DsrEFH-like Acife_2469 af121a4a596874169616f86331a0d006 131 Pfam PF02635 DsrE/DsrF-like family 12 131 1.0E-16 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Acife_2469 af121a4a596874169616f86331a0d006 131 SUPERFAMILY SSF75169 12 131 1.85E-18 T 12-10-2018 IPR027396 DsrEFH-like Acife_0624 18bd8cbb37059580ab965b885cd57821 603 Gene3D G3DSA:3.10.350.10 369 421 1.2E-11 T 12-10-2018 IPR036779 LysM domain superfamily Acife_0624 18bd8cbb37059580ab965b885cd57821 603 Pfam PF01476 LysM domain 493 535 2.0E-11 T 12-10-2018 IPR018392 LysM domain Acife_0624 18bd8cbb37059580ab965b885cd57821 603 Pfam PF01476 LysM domain 432 473 8.4E-10 T 12-10-2018 IPR018392 LysM domain Acife_0624 18bd8cbb37059580ab965b885cd57821 603 Pfam PF01476 LysM domain 372 413 1.5E-9 T 12-10-2018 IPR018392 LysM domain Acife_0624 18bd8cbb37059580ab965b885cd57821 603 Pfam PF01476 LysM domain 558 600 1.1E-12 T 12-10-2018 IPR018392 LysM domain Acife_0624 18bd8cbb37059580ab965b885cd57821 603 SUPERFAMILY SSF53955 130 285 3.71E-37 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Acife_0624 18bd8cbb37059580ab965b885cd57821 603 Pfam PF01464 Transglycosylase SLT domain 144 242 4.0E-23 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Acife_0624 18bd8cbb37059580ab965b885cd57821 603 SUPERFAMILY SSF54106 371 414 1.12E-7 T 12-10-2018 Acife_0624 18bd8cbb37059580ab965b885cd57821 603 Gene3D G3DSA:3.10.350.10 480 541 3.8E-13 T 12-10-2018 IPR036779 LysM domain superfamily Acife_0624 18bd8cbb37059580ab965b885cd57821 603 Gene3D G3DSA:3.10.350.10 424 479 1.0E-10 T 12-10-2018 IPR036779 LysM domain superfamily Acife_0624 18bd8cbb37059580ab965b885cd57821 603 Gene3D G3DSA:3.10.350.10 543 603 8.4E-16 T 12-10-2018 IPR036779 LysM domain superfamily Acife_0624 18bd8cbb37059580ab965b885cd57821 603 SUPERFAMILY SSF54106 493 535 8.76E-9 T 12-10-2018 Acife_0624 18bd8cbb37059580ab965b885cd57821 603 SUPERFAMILY SSF54106 432 473 3.14E-7 T 12-10-2018 Acife_0624 18bd8cbb37059580ab965b885cd57821 603 SMART SM00257 491 535 3.1E-10 T 12-10-2018 IPR018392 LysM domain Acife_0624 18bd8cbb37059580ab965b885cd57821 603 SMART SM00257 430 474 1.7E-7 T 12-10-2018 IPR018392 LysM domain Acife_0624 18bd8cbb37059580ab965b885cd57821 603 SMART SM00257 370 414 6.1E-9 T 12-10-2018 IPR018392 LysM domain Acife_0624 18bd8cbb37059580ab965b885cd57821 603 SMART SM00257 557 601 7.2E-13 T 12-10-2018 IPR018392 LysM domain Acife_0624 18bd8cbb37059580ab965b885cd57821 603 SUPERFAMILY SSF54106 556 601 1.44E-10 T 12-10-2018 Acife_0624 18bd8cbb37059580ab965b885cd57821 603 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 151 179 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Acife_0624 18bd8cbb37059580ab965b885cd57821 603 Gene3D G3DSA:1.10.530.10 128 280 9.6E-32 T 12-10-2018 Acife_1218 3086455a4ab477414954e9a19132ec02 368 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 3 351 1.5E-75 T 12-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 Acife_1218 3086455a4ab477414954e9a19132ec02 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 4 351 2.8E-54 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Acife_1805 e880f8617842781e96eac612786112fa 627 Gene3D G3DSA:3.20.20.540 213 525 1.5E-151 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Acife_1805 e880f8617842781e96eac612786112fa 627 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 139 592 2.1E-216 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Acife_1805 e880f8617842781e96eac612786112fa 627 Pfam PF13667 ThiC-associated domain 21 94 7.0E-24 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Acife_1805 e880f8617842781e96eac612786112fa 627 Pfam PF01964 Radical SAM ThiC family 141 589 3.7E-199 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Acife_1805 e880f8617842781e96eac612786112fa 627 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 139 594 99.816 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Acife_3008 e00985bfea7553e4fbcf3f0c8e6976d3 93 SUPERFAMILY SSF47729 3 92 8.83E-22 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_3008 e00985bfea7553e4fbcf3f0c8e6976d3 93 SMART SM00411 3 92 2.0E-22 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_3008 e00985bfea7553e4fbcf3f0c8e6976d3 93 Gene3D G3DSA:4.10.520.10 1 93 2.4E-24 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_3008 e00985bfea7553e4fbcf3f0c8e6976d3 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Acife_3008 e00985bfea7553e4fbcf3f0c8e6976d3 93 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 4.4E-7 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_3008 e00985bfea7553e4fbcf3f0c8e6976d3 93 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 4.4E-7 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_3008 e00985bfea7553e4fbcf3f0c8e6976d3 93 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 4.4E-7 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_3008 e00985bfea7553e4fbcf3f0c8e6976d3 93 Pfam PF00216 Bacterial DNA-binding protein 3 90 8.4E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0194 616d65215d912e782a42084ca81bc68c 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 284 38.227 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Acife_0194 616d65215d912e782a42084ca81bc68c 317 Gene3D G3DSA:3.40.1010.20 97 194 7.0E-110 T 12-10-2018 Acife_0194 616d65215d912e782a42084ca81bc68c 317 Pfam PF02401 LytB protein 3 280 4.9E-91 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Acife_0194 616d65215d912e782a42084ca81bc68c 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 281 9.8E-98 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Acife_0194 616d65215d912e782a42084ca81bc68c 317 Gene3D G3DSA:3.40.1010.20 6 280 7.0E-110 T 12-10-2018 Acife_0194 616d65215d912e782a42084ca81bc68c 317 Gene3D G3DSA:3.40.50.11270 12 96 7.0E-110 T 12-10-2018 Acife_0854 cd74ccb83ed7de5982a03fa1fdfb1e2f 149 SUPERFAMILY SSF52821 15 147 1.57E-21 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_0854 cd74ccb83ed7de5982a03fa1fdfb1e2f 149 Pfam PF00581 Rhodanese-like domain 27 125 1.9E-9 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_0854 cd74ccb83ed7de5982a03fa1fdfb1e2f 149 SMART SM00450 26 132 6.6E-10 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_0854 cd74ccb83ed7de5982a03fa1fdfb1e2f 149 Gene3D G3DSA:3.40.250.10 20 149 4.9E-33 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_2468 69506364d40a0ead19b755219a994691 145 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 10 135 29.883 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Acife_2468 69506364d40a0ead19b755219a994691 145 Gene3D G3DSA:2.40.50.100 7 135 7.7E-34 T 12-10-2018 Acife_2468 69506364d40a0ead19b755219a994691 145 SUPERFAMILY SSF51230 12 117 2.75E-27 T 12-10-2018 IPR011053 Single hybrid motif Acife_2468 69506364d40a0ead19b755219a994691 145 Pfam PF01597 Glycine cleavage H-protein 15 125 7.8E-36 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Acife_2468 69506364d40a0ead19b755219a994691 145 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 55 84 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Acife_2178 3567accc138e3d202ede930174e47445 617 SUPERFAMILY SSF52540 17 497 1.81E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2178 3567accc138e3d202ede930174e47445 617 Pfam PF13476 AAA domain 21 275 5.2E-7 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain Acife_2659 0897f012f3ca6c9ffae8cc510a0b1e2b 771 Pfam PF09397 Ftsk gamma domain 704 763 1.5E-24 T 12-10-2018 IPR018541 FtsK gamma domain Acife_2659 0897f012f3ca6c9ffae8cc510a0b1e2b 771 Pfam PF01580 FtsK/SpoIIIE family 390 600 1.6E-64 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Acife_2659 0897f012f3ca6c9ffae8cc510a0b1e2b 771 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 188 1.1E-35 T 12-10-2018 IPR025199 DNA translocase FtsK, 4TM region Acife_2659 0897f012f3ca6c9ffae8cc510a0b1e2b 771 Gene3D G3DSA:3.40.50.300 388 686 7.3E-115 T 12-10-2018 Acife_2659 0897f012f3ca6c9ffae8cc510a0b1e2b 771 Gene3D G3DSA:1.10.10.10 698 763 2.5E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2659 0897f012f3ca6c9ffae8cc510a0b1e2b 771 Gene3D G3DSA:3.30.980.40 282 387 2.4E-31 T 12-10-2018 Acife_2659 0897f012f3ca6c9ffae8cc510a0b1e2b 771 SUPERFAMILY SSF46785 702 764 7.89E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2659 0897f012f3ca6c9ffae8cc510a0b1e2b 771 SUPERFAMILY SSF52540 366 671 2.39E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2659 0897f012f3ca6c9ffae8cc510a0b1e2b 771 SMART SM00843 702 767 4.5E-33 T 12-10-2018 IPR018541 FtsK gamma domain Acife_1329 850f2cce3631b598b80456eb78b84994 204 Gene3D G3DSA:3.40.1180.10 1 135 5.2E-22 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Acife_1329 850f2cce3631b598b80456eb78b84994 204 Pfam PF01255 Putative undecaprenyl diphosphate synthase 13 203 3.6E-32 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Acife_1329 850f2cce3631b598b80456eb78b84994 204 SUPERFAMILY SSF64005 6 198 1.44E-40 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Acife_1329 850f2cce3631b598b80456eb78b84994 204 Gene3D G3DSA:3.40.1180.10 136 204 8.0E-17 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Acife_2762 e2021b1dcce275ed09bfa3920f526258 376 Pfam PF00437 Type II/IV secretion system protein 38 247 3.0E-34 T 12-10-2018 IPR001482 Type II/IV secretion system protein Acife_2762 e2021b1dcce275ed09bfa3920f526258 376 SUPERFAMILY SSF52540 3 338 4.4E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2762 e2021b1dcce275ed09bfa3920f526258 376 Gene3D G3DSA:3.40.50.300 102 357 2.6E-86 T 12-10-2018 Acife_2762 e2021b1dcce275ed09bfa3920f526258 376 Gene3D G3DSA:3.30.450.90 1 101 8.7E-29 T 12-10-2018 Acife_2762 e2021b1dcce275ed09bfa3920f526258 376 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 4 345 2.1E-131 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Acife_0139 fdaabe461e0f31571c50c7bdd06c5513 233 Pfam PF01618 MotA/TolQ/ExbB proton channel family 89 214 5.2E-37 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Acife_0139 fdaabe461e0f31571c50c7bdd06c5513 233 TIGRFAM TIGR02796 tolQ: protein TolQ 14 226 2.4E-84 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Acife_0139 fdaabe461e0f31571c50c7bdd06c5513 233 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 13 231 39.972 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Acife_0957 f644e186e0da6ceb61890becf49b7da6 491 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 460 3.9E-123 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 Acife_0957 f644e186e0da6ceb61890becf49b7da6 491 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 4 477 45.648 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 Acife_2213 d68ba9390b0bd8d554d397ed73bc7e16 435 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 1 432 1.4E-178 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Acife_2213 d68ba9390b0bd8d554d397ed73bc7e16 435 PRINTS PR00758 Arsenical pump membrane protein signature 371 396 1.9E-80 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Acife_2213 d68ba9390b0bd8d554d397ed73bc7e16 435 PRINTS PR00758 Arsenical pump membrane protein signature 100 124 1.9E-80 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Acife_2213 d68ba9390b0bd8d554d397ed73bc7e16 435 PRINTS PR00758 Arsenical pump membrane protein signature 176 199 1.9E-80 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Acife_2213 d68ba9390b0bd8d554d397ed73bc7e16 435 PRINTS PR00758 Arsenical pump membrane protein signature 143 167 1.9E-80 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Acife_2213 d68ba9390b0bd8d554d397ed73bc7e16 435 PRINTS PR00758 Arsenical pump membrane protein signature 283 307 1.9E-80 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Acife_2213 d68ba9390b0bd8d554d397ed73bc7e16 435 PRINTS PR00758 Arsenical pump membrane protein signature 404 428 1.9E-80 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Acife_2213 d68ba9390b0bd8d554d397ed73bc7e16 435 Pfam PF02040 Arsenical pump membrane protein 2 432 6.2E-137 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Acife_2084 ad4aabe027fdffbe038c6be8e3c05487 164 Pfam PF13673 Acetyltransferase (GNAT) domain 32 148 1.7E-8 T 12-10-2018 IPR000182 GNAT domain Acife_2084 ad4aabe027fdffbe038c6be8e3c05487 164 SUPERFAMILY SSF55729 15 152 2.7E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_2084 ad4aabe027fdffbe038c6be8e3c05487 164 Gene3D G3DSA:3.40.630.30 2 161 2.1E-46 T 12-10-2018 Acife_1590 739e8c027cd35e83fa81bfb5dbe9ac8b 291 Pfam PF00378 Enoyl-CoA hydratase/isomerase 121 239 6.4E-20 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Acife_1590 739e8c027cd35e83fa81bfb5dbe9ac8b 291 SUPERFAMILY SSF52096 82 261 7.29E-30 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Acife_1590 739e8c027cd35e83fa81bfb5dbe9ac8b 291 Gene3D G3DSA:3.90.226.10 5 232 4.3E-74 T 12-10-2018 Acife_0310 fba2b006c0d01164cd656922418df106 315 SUPERFAMILY SSF53067 4 312 1.83E-52 T 12-10-2018 Acife_0310 fba2b006c0d01164cd656922418df106 315 Gene3D G3DSA:3.30.420.40 2 141 4.9E-26 T 12-10-2018 Acife_0310 fba2b006c0d01164cd656922418df106 315 Gene3D G3DSA:3.30.420.40 142 294 1.0E-40 T 12-10-2018 Acife_0310 fba2b006c0d01164cd656922418df106 315 Pfam PF00480 ROK family 6 310 6.4E-55 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Acife_1112 4ba8fe476c96f50c2c9c96b194537f41 66 Gene3D G3DSA:3.10.20.30 1 66 1.8E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_1112 4ba8fe476c96f50c2c9c96b194537f41 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 4.1E-22 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis Acife_1112 4ba8fe476c96f50c2c9c96b194537f41 66 Pfam PF02597 ThiS family 3 66 9.1E-14 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Acife_1112 4ba8fe476c96f50c2c9c96b194537f41 66 SUPERFAMILY SSF54285 1 66 1.55E-18 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Acife_0688 c6e2f13affc26ba75820d47662bd37f5 313 SUPERFAMILY SSF55681 79 259 8.2E-39 T 12-10-2018 Acife_0688 c6e2f13affc26ba75820d47662bd37f5 313 Gene3D G3DSA:3.30.930.10 72 261 1.3E-44 T 12-10-2018 Acife_0688 c6e2f13affc26ba75820d47662bd37f5 313 Pfam PF03099 Biotin/lipoate A/B protein ligase family 101 203 1.2E-9 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Acife_0688 c6e2f13affc26ba75820d47662bd37f5 313 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 83 308 3.0E-38 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Acife_2850 200dd6daadd5f01f0484acd7945fb310 319 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 20 303 1.1E-14 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Acife_2850 200dd6daadd5f01f0484acd7945fb310 319 PIRSF PIRSF028561 11 317 3.5E-94 T 12-10-2018 IPR014548 Predicted acyltransferase Acife_2632 b5ca981bc2d51c88121188bf8fb99801 77 Gene3D G3DSA:3.30.110.40 1 77 2.5E-25 T 12-10-2018 IPR036868 TusA-like domain superfamily Acife_2632 b5ca981bc2d51c88121188bf8fb99801 77 SUPERFAMILY SSF64307 5 75 7.59E-21 T 12-10-2018 IPR036868 TusA-like domain superfamily Acife_2632 b5ca981bc2d51c88121188bf8fb99801 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 12-10-2018 IPR001455 TusA-like domain Acife_2632 b5ca981bc2d51c88121188bf8fb99801 77 Pfam PF01206 Sulfurtransferase TusA 6 75 8.7E-20 T 12-10-2018 IPR001455 TusA-like domain Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 SUPERFAMILY SSF81442 107 597 4.45E-125 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 112 550 1.7E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 PRINTS PR01165 Cytochrome c oxidase subunit I signature 248 266 6.1E-53 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 296 6.1E-53 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 PRINTS PR01165 Cytochrome c oxidase subunit I signature 509 530 6.1E-53 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 PRINTS PR01165 Cytochrome c oxidase subunit I signature 327 348 6.1E-53 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 PRINTS PR01165 Cytochrome c oxidase subunit I signature 150 173 6.1E-53 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 PRINTS PR01165 Cytochrome c oxidase subunit I signature 459 478 6.1E-53 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 PRINTS PR01165 Cytochrome c oxidase subunit I signature 219 231 6.1E-53 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 PRINTS PR01165 Cytochrome c oxidase subunit I signature 373 388 6.1E-53 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 PRINTS PR01165 Cytochrome c oxidase subunit I signature 396 417 6.1E-53 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 PRINTS PR01165 Cytochrome c oxidase subunit I signature 178 202 6.1E-53 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 PRINTS PR01165 Cytochrome c oxidase subunit I signature 431 449 6.1E-53 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1868 f163ff43bedca642dbf79afe6fe4e680 627 Gene3D G3DSA:1.20.210.10 94 604 1.3E-138 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0200 ffbd745a18f9a7b7a617ec628ac3e539 476 Pfam PF02321 Outer membrane efflux protein 76 261 1.1E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_0200 ffbd745a18f9a7b7a617ec628ac3e539 476 Pfam PF02321 Outer membrane efflux protein 288 468 4.4E-31 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_0200 ffbd745a18f9a7b7a617ec628ac3e539 476 Gene3D G3DSA:1.20.1600.10 41 473 3.6E-84 T 12-10-2018 Acife_0200 ffbd745a18f9a7b7a617ec628ac3e539 476 PIRSF PIRSF001892 3 474 4.7E-81 T 12-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 Acife_0200 ffbd745a18f9a7b7a617ec628ac3e539 476 SUPERFAMILY SSF56954 65 470 7.59E-79 T 12-10-2018 Acife_2521 711e7b3503cbcf538bd575e08a734dcd 109 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 17 108 20.886 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Acife_2521 711e7b3503cbcf538bd575e08a734dcd 109 SUPERFAMILY SSF55248 20 108 3.92E-30 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Acife_2521 711e7b3503cbcf538bd575e08a734dcd 109 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 20 106 4.3E-28 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Acife_2521 711e7b3503cbcf538bd575e08a734dcd 109 Gene3D G3DSA:3.30.1360.20 19 109 3.7E-31 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Acife_0082 65523fbff79f6bbe88ef4c02ac73b0ab 377 SUPERFAMILY SSF46626 193 361 2.69E-28 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_0082 65523fbff79f6bbe88ef4c02ac73b0ab 377 SUPERFAMILY SSF46626 40 194 4.52E-50 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_0082 65523fbff79f6bbe88ef4c02ac73b0ab 377 Gene3D G3DSA:1.10.760.10 193 343 1.8E-106 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_0082 65523fbff79f6bbe88ef4c02ac73b0ab 377 PIRSF PIRSF000294 32 363 1.3E-104 T 12-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 Acife_0082 65523fbff79f6bbe88ef4c02ac73b0ab 377 Pfam PF03150 Di-haem cytochrome c peroxidase 56 206 2.5E-52 T 12-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 Acife_0082 65523fbff79f6bbe88ef4c02ac73b0ab 377 Gene3D G3DSA:1.10.760.10 52 344 1.8E-106 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_1440 1ccff43bdcad232957dc3754125e58e8 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 337 141.275 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Acife_1440 1ccff43bdcad232957dc3754125e58e8 341 SUPERFAMILY SSF53659 1 331 2.06E-101 T 12-10-2018 Acife_1440 1ccff43bdcad232957dc3754125e58e8 341 Gene3D G3DSA:3.40.718.10 2 339 2.0E-126 T 12-10-2018 Acife_1440 1ccff43bdcad232957dc3754125e58e8 341 PIRSF PIRSF002465 1 335 7.2E-123 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Acife_1440 1ccff43bdcad232957dc3754125e58e8 341 Pfam PF02504 Fatty acid synthesis protein 4 316 1.8E-101 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Acife_1440 1ccff43bdcad232957dc3754125e58e8 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 331 7.1E-108 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Acife_1699 53f6984de42d7892e5f9eda567a0a0f1 82 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 9 53 3.0E-5 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Acife_1699 53f6984de42d7892e5f9eda567a0a0f1 82 Pfam PF02609 Exonuclease VII small subunit 14 65 1.3E-15 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Acife_1699 53f6984de42d7892e5f9eda567a0a0f1 82 PIRSF PIRSF006488 2 82 6.2E-17 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Acife_1699 53f6984de42d7892e5f9eda567a0a0f1 82 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 14 68 2.5E-18 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Acife_1699 53f6984de42d7892e5f9eda567a0a0f1 82 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 13 73 12.839 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Acife_1699 53f6984de42d7892e5f9eda567a0a0f1 82 SUPERFAMILY SSF116842 11 74 4.58E-16 T 12-10-2018 Acife_1699 53f6984de42d7892e5f9eda567a0a0f1 82 Gene3D G3DSA:1.10.287.1040 8 81 1.2E-18 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Acife_2272 195ff5cf15dcb3e79814574f39e6b625 587 Pfam PF06472 ABC transporter transmembrane region 2 3 298 2.5E-65 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Acife_2272 195ff5cf15dcb3e79814574f39e6b625 587 SMART SM00382 395 573 6.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2272 195ff5cf15dcb3e79814574f39e6b625 587 Gene3D G3DSA:3.40.50.300 340 572 5.4E-37 T 12-10-2018 Acife_2272 195ff5cf15dcb3e79814574f39e6b625 587 SUPERFAMILY SSF52540 365 567 1.2E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2272 195ff5cf15dcb3e79814574f39e6b625 587 Pfam PF00005 ABC transporter 387 520 1.7E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_2272 195ff5cf15dcb3e79814574f39e6b625 587 SUPERFAMILY SSF90123 11 342 2.22E-20 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Acife_2272 195ff5cf15dcb3e79814574f39e6b625 587 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_1891 ebc821a5fa1e80f863676cc472f22ce1 272 Pfam PF13614 AAA domain 4 170 1.8E-26 T 12-10-2018 IPR025669 AAA domain Acife_1891 ebc821a5fa1e80f863676cc472f22ce1 272 SUPERFAMILY SSF52540 4 247 1.06E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1891 ebc821a5fa1e80f863676cc472f22ce1 272 Gene3D G3DSA:3.40.50.300 2 248 1.6E-46 T 12-10-2018 Acife_2649 54fd1fea0c198a8a97cb4d8391c4a629 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 9 116 22.395 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Acife_2649 54fd1fea0c198a8a97cb4d8391c4a629 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 82 103 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Acife_2649 54fd1fea0c198a8a97cb4d8391c4a629 131 SUPERFAMILY SSF89919 9 118 1.83E-22 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Acife_2649 54fd1fea0c198a8a97cb4d8391c4a629 131 Pfam PF02033 Ribosome-binding factor A 10 116 5.0E-19 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Acife_2649 54fd1fea0c198a8a97cb4d8391c4a629 131 Gene3D G3DSA:3.30.300.20 5 111 1.2E-20 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Acife_0079 4eb751a0a5c2c0d4230dd1c0a97d8616 121 Gene3D G3DSA:3.40.1350.10 11 120 3.0E-34 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Acife_0079 4eb751a0a5c2c0d4230dd1c0a97d8616 121 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 117 1.4E-29 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 Acife_0079 4eb751a0a5c2c0d4230dd1c0a97d8616 121 SUPERFAMILY SSF52980 8 114 3.08E-19 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Acife_0079 4eb751a0a5c2c0d4230dd1c0a97d8616 121 Pfam PF02021 Uncharacterised protein family UPF0102 12 102 9.9E-27 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 Acife_0079 4eb751a0a5c2c0d4230dd1c0a97d8616 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 116 22.668 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 Acife_1545 0eeb66c80f1b2d3a504a6d59be1b4815 96 Pfam PF08681 Protein of unknown function (DUF1778) 14 90 4.9E-21 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Acife_1545 0eeb66c80f1b2d3a504a6d59be1b4815 96 SUPERFAMILY SSF47598 11 88 1.13E-16 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_1545 0eeb66c80f1b2d3a504a6d59be1b4815 96 Gene3D G3DSA:1.20.5.780 8 92 9.8E-12 T 12-10-2018 Acife_0679 7ea4acabd0779b67afe33b4fc50217cd 110 Pfam PF12112 Protein of unknown function (DUF3579) 2 85 6.9E-23 T 12-10-2018 IPR021969 Protein of unknown function DUF3579 Acife_0679 7ea4acabd0779b67afe33b4fc50217cd 110 Gene3D G3DSA:3.30.70.2340 1 97 7.0E-29 T 12-10-2018 Acife_2340 a2177666d7c1eaaf2b735c8d59288ea0 246 Pfam PF02633 Creatinine amidohydrolase 5 233 1.3E-49 T 12-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 Acife_2340 a2177666d7c1eaaf2b735c8d59288ea0 246 Gene3D G3DSA:3.40.50.10310 1 240 3.8E-55 T 12-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 Acife_2340 a2177666d7c1eaaf2b735c8d59288ea0 246 SUPERFAMILY SSF102215 1 236 5.89E-54 T 12-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 Acife_2490 57cc20200b72de317d7bdc585d1eae0d 170 Gene3D G3DSA:2.60.40.2470 39 170 2.8E-39 T 12-10-2018 IPR038162 Ig-like SoxY domain superfamily Acife_2490 57cc20200b72de317d7bdc585d1eae0d 170 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 5 27 2.0E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Acife_2490 57cc20200b72de317d7bdc585d1eae0d 170 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 34 4.7E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Acife_2490 57cc20200b72de317d7bdc585d1eae0d 170 PIRSF PIRSF010312 2 170 1.5E-41 T 12-10-2018 IPR016568 Sulphur oxidation, SoxY Acife_2490 57cc20200b72de317d7bdc585d1eae0d 170 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 7 170 4.5E-43 T 12-10-2018 IPR016568 Sulphur oxidation, SoxY Acife_2490 57cc20200b72de317d7bdc585d1eae0d 170 Pfam PF13501 Sulfur oxidation protein SoxY 58 168 5.5E-35 T 12-10-2018 IPR032711 Ig-like SoxY domain Acife_2556 000101fbc452a3a118ac5c24e6276464 257 Gene3D G3DSA:3.20.20.70 1 255 5.1E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2556 000101fbc452a3a118ac5c24e6276464 257 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 55.657 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_2556 000101fbc452a3a118ac5c24e6276464 257 SUPERFAMILY SSF51351 1 249 2.88E-86 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_2556 000101fbc452a3a118ac5c24e6276464 257 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.7E-57 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_2556 000101fbc452a3a118ac5c24e6276464 257 Pfam PF00121 Triosephosphate isomerase 5 247 1.2E-85 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_2556 000101fbc452a3a118ac5c24e6276464 257 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0747 13b24d6c5a47491e8b46ef917240b932 1229 SUPERFAMILY SSF52540 47 295 5.16E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1075 b5bad89342e59458b01698e17db19266 206 Pfam PF02669 K+-transporting ATPase, c chain 6 187 2.6E-74 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Acife_1075 b5bad89342e59458b01698e17db19266 206 PIRSF PIRSF001296 1 192 2.0E-75 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Acife_1075 b5bad89342e59458b01698e17db19266 206 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 188 6.5E-72 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Acife_1075 b5bad89342e59458b01698e17db19266 206 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 189 35.198 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Acife_1565 e33627c276d1e6e863924b4daff331ea 79 Gene3D G3DSA:1.10.1220.10 1 51 2.4E-30 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Acife_1565 e33627c276d1e6e863924b4daff331ea 79 Pfam PF16762 Ribbon-helix-helix domain 2 78 6.2E-38 T 12-10-2018 IPR031914 XACb0070, ribbon-helix-helix domain Acife_2151 06cad7aef94977edd60a25e7d2c5d9af 338 PIRSF PIRSF000116 3 207 1.8E-47 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Acife_2151 06cad7aef94977edd60a25e7d2c5d9af 338 PIRSF PIRSF000116 202 332 2.4E-14 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Acife_2151 06cad7aef94977edd60a25e7d2c5d9af 338 SUPERFAMILY SSF51735 1 182 3.41E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2151 06cad7aef94977edd60a25e7d2c5d9af 338 SUPERFAMILY SSF48179 183 332 4.25E-71 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Acife_2151 06cad7aef94977edd60a25e7d2c5d9af 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 4.6E-68 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Acife_2151 06cad7aef94977edd60a25e7d2c5d9af 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 2.2E-139 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Acife_2151 06cad7aef94977edd60a25e7d2c5d9af 338 Gene3D G3DSA:3.40.50.720 1 181 8.1E-78 T 12-10-2018 Acife_2151 06cad7aef94977edd60a25e7d2c5d9af 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 45.639 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Acife_2151 06cad7aef94977edd60a25e7d2c5d9af 338 Gene3D G3DSA:1.10.3730.40 182 338 4.3E-76 T 12-10-2018 Acife_2151 06cad7aef94977edd60a25e7d2c5d9af 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 6.3E-75 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Acife_1828 0bb6fe55b9ee85e1ed9c9523a2728b6c 113 Gene3D G3DSA:3.30.2320.80 1 113 1.9E-30 T 12-10-2018 Acife_1828 0bb6fe55b9ee85e1ed9c9523a2728b6c 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 1.1E-32 T 12-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Acife_1828 0bb6fe55b9ee85e1ed9c9523a2728b6c 113 PIRSF PIRSF004761 1 113 6.0E-36 T 12-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Acife_1828 0bb6fe55b9ee85e1ed9c9523a2728b6c 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 21.902 T 12-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Acife_1828 0bb6fe55b9ee85e1ed9c9523a2728b6c 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.5E-33 T 12-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Acife_0166 941854f5a2396741160d1be64a02f63a 193 Pfam PF01420 Type I restriction modification DNA specificity domain 3 153 1.4E-4 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Acife_0166 941854f5a2396741160d1be64a02f63a 193 SUPERFAMILY SSF116734 3 177 9.97E-22 T 12-10-2018 Acife_0166 941854f5a2396741160d1be64a02f63a 193 Gene3D G3DSA:3.90.220.20 1 184 9.6E-23 T 12-10-2018 Acife_2137 76b152f118097fce7969960516ee982a 480 SMART SM00388 250 316 1.0E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2137 76b152f118097fce7969960516ee982a 480 SMART SM00304 196 249 3.1E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Acife_2137 76b152f118097fce7969960516ee982a 480 SUPERFAMILY SSF55874 306 470 4.32E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_2137 76b152f118097fce7969960516ee982a 480 Gene3D G3DSA:3.30.565.10 326 474 3.4E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Acife_2137 76b152f118097fce7969960516ee982a 480 Gene3D G3DSA:1.10.287.130 200 318 2.8E-24 T 12-10-2018 Acife_2137 76b152f118097fce7969960516ee982a 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 315 6.4E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Acife_2137 76b152f118097fce7969960516ee982a 480 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 16 468 9.1E-117 T 12-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 Acife_2137 76b152f118097fce7969960516ee982a 480 SUPERFAMILY SSF47384 233 316 1.26E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Acife_2137 76b152f118097fce7969960516ee982a 480 SUPERFAMILY SSF158472 196 247 4.84E-5 T 12-10-2018 Acife_2137 76b152f118097fce7969960516ee982a 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 2.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2137 76b152f118097fce7969960516ee982a 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 2.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2137 76b152f118097fce7969960516ee982a 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 2.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2137 76b152f118097fce7969960516ee982a 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 2.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Acife_2137 76b152f118097fce7969960516ee982a 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 468 7.9E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_2137 76b152f118097fce7969960516ee982a 480 SMART SM00387 359 471 4.7E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Acife_0691 e89bd0e6748dd159794503645c8f7db8 281 Pfam PF08721 TnsA endonuclease C terminal 173 255 8.7E-7 T 12-10-2018 IPR014832 TnsA endonuclease C-terminal Acife_0691 e89bd0e6748dd159794503645c8f7db8 281 SUPERFAMILY SSF52980 13 174 2.52E-54 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Acife_0691 e89bd0e6748dd159794503645c8f7db8 281 Pfam PF08722 TnsA endonuclease N terminal 77 171 3.4E-27 T 12-10-2018 IPR014833 TnsA endonuclease, N-terminal Acife_0691 e89bd0e6748dd159794503645c8f7db8 281 Gene3D G3DSA:3.40.1350.10 9 174 2.1E-61 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Acife_0414 d8360170891c10dfea7c37b66c8768ca 137 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 7 134 3.6E-35 T 12-10-2018 IPR032758 Antitoxin MqsA/HigA-2 Acife_0414 d8360170891c10dfea7c37b66c8768ca 137 SUPERFAMILY SSF47413 63 119 8.04E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_0414 d8360170891c10dfea7c37b66c8768ca 137 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 7 134 2.5E-36 T 12-10-2018 IPR022452 Antitoxin MqsA Acife_0414 d8360170891c10dfea7c37b66c8768ca 137 SMART SM00530 76 130 9.3E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_0414 d8360170891c10dfea7c37b66c8768ca 137 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 7 52 4.2E-11 T 12-10-2018 IPR022453 Zinc finger, MqsA-type Acife_0414 d8360170891c10dfea7c37b66c8768ca 137 Gene3D G3DSA:1.10.260.40 19 134 2.8E-27 T 12-10-2018 Acife_2377 968b7473d7b5617979e9e3dce16b1a01 702 TIGRFAM TIGR02688 TIGR02688: TIGR02688 family protein 8 455 2.6E-194 T 12-10-2018 IPR014061 Conserved hypothetical protein CHP02688 Acife_2377 968b7473d7b5617979e9e3dce16b1a01 702 Pfam PF13337 Putative ATP-dependent Lon protease 10 463 7.5E-185 T 12-10-2018 IPR014061 Conserved hypothetical protein CHP02688 Acife_2377 968b7473d7b5617979e9e3dce16b1a01 702 Gene3D G3DSA:3.30.870.30 536 699 5.8E-40 T 12-10-2018 IPR038113 MIT, C-terminal domain superfamily Acife_2377 968b7473d7b5617979e9e3dce16b1a01 702 Pfam PF16565 Phospholipase D-like domain at C-terminus of MIT 547 693 7.4E-42 T 12-10-2018 IPR032341 MIT, C-terminal phospholipase D-like domain Acife_0886 9fea08c5a7bd30688e28250e51fc8b24 362 SUPERFAMILY SSF53383 6 353 3.99E-91 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_0886 9fea08c5a7bd30688e28250e51fc8b24 362 Gene3D G3DSA:3.90.1150.10 6 277 2.9E-113 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_0886 9fea08c5a7bd30688e28250e51fc8b24 362 PIRSF PIRSF005572 279 359 5.9E-15 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Acife_0886 9fea08c5a7bd30688e28250e51fc8b24 362 PIRSF PIRSF005572 3 286 6.9E-103 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Acife_0886 9fea08c5a7bd30688e28250e51fc8b24 362 Gene3D G3DSA:3.90.1150.10 279 360 8.9E-23 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_0886 9fea08c5a7bd30688e28250e51fc8b24 362 Pfam PF00266 Aminotransferase class-V 6 277 1.0E-62 T 12-10-2018 IPR000192 Aminotransferase class V domain Acife_0886 9fea08c5a7bd30688e28250e51fc8b24 362 Gene3D G3DSA:3.40.640.10 17 258 2.9E-113 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1627 cc2dda3e1d14f130a8a56e210d7c60f1 109 SUPERFAMILY SSF50022 4 105 3.01E-22 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_1627 cc2dda3e1d14f130a8a56e210d7c60f1 109 Pfam PF00355 Rieske [2Fe-2S] domain 6 84 1.0E-11 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Acife_1627 cc2dda3e1d14f130a8a56e210d7c60f1 109 Gene3D G3DSA:2.102.10.10 1 107 4.1E-25 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Acife_0832 e515f7ab5e709040f1dacd008334c2f3 432 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 146 162 2.1E-21 T 12-10-2018 Acife_0832 e515f7ab5e709040f1dacd008334c2f3 432 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 253 265 2.1E-21 T 12-10-2018 Acife_0832 e515f7ab5e709040f1dacd008334c2f3 432 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 319 2.1E-21 T 12-10-2018 Acife_0832 e515f7ab5e709040f1dacd008334c2f3 432 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 170 184 2.1E-21 T 12-10-2018 Acife_0832 e515f7ab5e709040f1dacd008334c2f3 432 Gene3D G3DSA:1.20.1260.30 1 122 7.6E-40 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Acife_0832 e515f7ab5e709040f1dacd008334c2f3 432 Gene3D G3DSA:3.40.50.150 123 432 2.4E-76 T 12-10-2018 Acife_0832 e515f7ab5e709040f1dacd008334c2f3 432 Pfam PF02384 N-6 DNA Methylase 123 414 1.3E-68 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Acife_0832 e515f7ab5e709040f1dacd008334c2f3 432 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 256 262 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Acife_0832 e515f7ab5e709040f1dacd008334c2f3 432 Pfam PF12161 HsdM N-terminal domain 6 113 3.4E-12 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Acife_0832 e515f7ab5e709040f1dacd008334c2f3 432 SUPERFAMILY SSF53335 5 414 1.91E-111 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0710 cb711cf051be6d4960aee657da21fc98 728 Gene3D G3DSA:3.30.450.40 77 281 4.3E-25 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_0710 cb711cf051be6d4960aee657da21fc98 728 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 503 518 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Acife_0710 cb711cf051be6d4960aee657da21fc98 728 SMART SM00382 436 580 3.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0710 cb711cf051be6d4960aee657da21fc98 728 SUPERFAMILY SSF46689 681 723 1.04E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_0710 cb711cf051be6d4960aee657da21fc98 728 Pfam PF02954 Bacterial regulatory protein, Fis family 682 719 6.5E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Acife_0710 cb711cf051be6d4960aee657da21fc98 728 Gene3D G3DSA:1.10.8.60 589 665 7.6E-14 T 12-10-2018 Acife_0710 cb711cf051be6d4960aee657da21fc98 728 Pfam PF00158 Sigma-54 interaction domain 418 582 3.2E-62 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Acife_0710 cb711cf051be6d4960aee657da21fc98 728 Gene3D G3DSA:3.40.50.300 404 588 4.2E-58 T 12-10-2018 Acife_0710 cb711cf051be6d4960aee657da21fc98 728 Gene3D G3DSA:1.10.10.60 679 725 9.0E-11 T 12-10-2018 Acife_0710 cb711cf051be6d4960aee657da21fc98 728 SUPERFAMILY SSF52540 418 656 1.51E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0710 cb711cf051be6d4960aee657da21fc98 728 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 440 453 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Acife_0234 25d71b704a6672edfa088a168a7920b5 102 Pfam PF14373 Superinfection immunity protein 39 80 1.7E-16 T 12-10-2018 IPR016410 Bacteriophage-associated immunity protein Acife_0234 25d71b704a6672edfa088a168a7920b5 102 ProDom PD028561 MEMBRANE IMMUNITY SUPERINFECTION GP66 PROTEIN IMM GP75 IMM RB69 INTEGRAL 39 68 0.003 T 12-10-2018 IPR016410 Bacteriophage-associated immunity protein Acife_3006 560c8427470c565d0063e53e6b33fffc 219 Gene3D G3DSA:1.10.1710.10 92 196 3.7E-7 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily Acife_3006 560c8427470c565d0063e53e6b33fffc 219 SUPERFAMILY SSF48657 99 196 1.57E-8 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily Acife_3006 560c8427470c565d0063e53e6b33fffc 219 Pfam PF04352 ProQ/FINO family 128 196 1.1E-6 T 12-10-2018 IPR016103 ProQ/FinO domain Acife_0443 357abb33a0b806736a53158eab658202 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 3.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0443 357abb33a0b806736a53158eab658202 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 59 3.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0443 357abb33a0b806736a53158eab658202 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 59 70 3.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0443 357abb33a0b806736a53158eab658202 332 Gene3D G3DSA:1.10.10.10 16 104 9.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0443 357abb33a0b806736a53158eab658202 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 82 7.3E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0443 357abb33a0b806736a53158eab658202 332 Gene3D G3DSA:3.40.190.10 184 286 1.1E-43 T 12-10-2018 Acife_0443 357abb33a0b806736a53158eab658202 332 Pfam PF03466 LysR substrate binding domain 109 310 4.2E-46 T 12-10-2018 IPR005119 LysR, substrate-binding Acife_0443 357abb33a0b806736a53158eab658202 332 SUPERFAMILY SSF46785 19 101 1.96E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0443 357abb33a0b806736a53158eab658202 332 SUPERFAMILY SSF53850 110 312 1.6E-40 T 12-10-2018 Acife_0443 357abb33a0b806736a53158eab658202 332 Gene3D G3DSA:3.40.190.10 111 308 1.1E-43 T 12-10-2018 Acife_1542 09e51220cf50aa22acfa7bac6a97bc2e 85 Gene3D G3DSA:2.10.260.10 1 84 4.1E-11 T 12-10-2018 Acife_1542 09e51220cf50aa22acfa7bac6a97bc2e 85 SUPERFAMILY SSF89447 2 74 1.64E-12 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_2900 2617f2bf35dbd35b75314f2564eb897f 310 Gene3D G3DSA:3.40.50.300 133 310 1.1E-57 T 12-10-2018 Acife_2900 2617f2bf35dbd35b75314f2564eb897f 310 SUPERFAMILY SSF53795 134 300 5.19E-29 T 12-10-2018 Acife_2900 2617f2bf35dbd35b75314f2564eb897f 310 Pfam PF02603 HPr Serine kinase N terminus 44 129 2.2E-10 T 12-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 Acife_2900 2617f2bf35dbd35b75314f2564eb897f 310 Gene3D G3DSA:3.40.1390.20 39 132 1.0E-10 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Acife_2900 2617f2bf35dbd35b75314f2564eb897f 310 Pfam PF07475 HPr Serine kinase C-terminal domain 131 302 1.2E-55 T 12-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 Acife_2900 2617f2bf35dbd35b75314f2564eb897f 310 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 44 304 3.9E-84 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 Acife_2900 2617f2bf35dbd35b75314f2564eb897f 310 SUPERFAMILY SSF75138 44 133 1.44E-12 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Acife_2560 37c913a99377cd072fe4da68c258e625 481 PIRSF PIRSF004919 19 480 1.1E-137 T 12-10-2018 IPR025502 TldD Acife_2560 37c913a99377cd072fe4da68c258e625 481 SUPERFAMILY SSF111283 24 479 2.88E-132 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Acife_2560 37c913a99377cd072fe4da68c258e625 481 Gene3D G3DSA:3.30.2290.10 15 239 7.1E-22 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Acife_2560 37c913a99377cd072fe4da68c258e625 481 Pfam PF01523 Putative modulator of DNA gyrase 38 331 1.4E-70 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Acife_2257 88ad55d2c4ef74726e3eb81d9eef21ef 93 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 82 9.6E-10 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Acife_2257 88ad55d2c4ef74726e3eb81d9eef21ef 93 Gene3D G3DSA:3.30.2310.20 1 93 1.6E-22 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_2257 88ad55d2c4ef74726e3eb81d9eef21ef 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 81 2.1E-8 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Acife_2257 88ad55d2c4ef74726e3eb81d9eef21ef 93 SUPERFAMILY SSF143011 1 82 4.05E-20 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_1247 348320b63a41edd0098beaf5256713c2 313 Pfam PF00146 NADH dehydrogenase 10 301 2.1E-33 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_0555 d1f60dba35671afc28fda3abb61aef96 189 SUPERFAMILY SSF53335 3 180 1.29E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0555 d1f60dba35671afc28fda3abb61aef96 189 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 182 9.3E-42 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Acife_0555 d1f60dba35671afc28fda3abb61aef96 189 PIRSF PIRSF004553 2 183 3.4E-43 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Acife_0555 d1f60dba35671afc28fda3abb61aef96 189 Pfam PF03602 Conserved hypothetical protein 95 4 180 1.7E-45 T 12-10-2018 Acife_0555 d1f60dba35671afc28fda3abb61aef96 189 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 115 121 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Acife_0555 d1f60dba35671afc28fda3abb61aef96 189 Gene3D G3DSA:3.40.50.150 1 183 1.2E-52 T 12-10-2018 Acife_0792 1c8d6bcf75b2b6db3773463828427a85 334 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 327 5.4E-28 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Acife_0792 1c8d6bcf75b2b6db3773463828427a85 334 Gene3D G3DSA:3.40.50.720 7 318 1.8E-124 T 12-10-2018 Acife_0792 1c8d6bcf75b2b6db3773463828427a85 334 SUPERFAMILY SSF51735 101 297 1.25E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0792 1c8d6bcf75b2b6db3773463828427a85 334 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Acife_0792 1c8d6bcf75b2b6db3773463828427a85 334 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 296 1.2E-56 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Acife_0792 1c8d6bcf75b2b6db3773463828427a85 334 SUPERFAMILY SSF52283 2 133 6.8E-35 T 12-10-2018 Acife_0792 1c8d6bcf75b2b6db3773463828427a85 334 Gene3D G3DSA:3.40.50.720 101 296 1.8E-124 T 12-10-2018 Acife_0792 1c8d6bcf75b2b6db3773463828427a85 334 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Acife_0928 5c691fb8bd1ea08ef8a0f6530c3e9169 231 Gene3D G3DSA:3.40.50.300 4 228 3.3E-62 T 12-10-2018 Acife_0928 5c691fb8bd1ea08ef8a0f6530c3e9169 231 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_0928 5c691fb8bd1ea08ef8a0f6530c3e9169 231 SMART SM00382 35 227 1.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0928 5c691fb8bd1ea08ef8a0f6530c3e9169 231 SUPERFAMILY SSF52540 6 226 8.11E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0928 5c691fb8bd1ea08ef8a0f6530c3e9169 231 Pfam PF00005 ABC transporter 27 174 4.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_1200 a457460949a17ffca4568a359513b26e 88 SUPERFAMILY SSF47598 3 43 4.17E-10 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_1200 a457460949a17ffca4568a359513b26e 88 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 3.6E-8 T 12-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Acife_3154 66f475979981becc11ac4e29b61e3263 379 Gene3D G3DSA:1.20.1250.20 194 376 3.8E-17 T 12-10-2018 Acife_3154 66f475979981becc11ac4e29b61e3263 379 SUPERFAMILY SSF103473 7 377 1.57E-22 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_1771 95c0e3ed6b3185978ed68a2870e5a745 252 SUPERFAMILY SSF56281 1 252 5.63E-51 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_1771 95c0e3ed6b3185978ed68a2870e5a745 252 Gene3D G3DSA:3.60.15.10 1 252 1.5E-77 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_1771 95c0e3ed6b3185978ed68a2870e5a745 252 Pfam PF12706 Beta-lactamase superfamily domain 45 224 4.0E-39 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_1771 95c0e3ed6b3185978ed68a2870e5a745 252 SMART SM00849 34 223 3.7E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_2516 61c2a6e301ac6693872670ac028493df 242 SMART SM00563 72 186 7.7E-32 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Acife_2516 61c2a6e301ac6693872670ac028493df 242 Pfam PF01553 Acyltransferase 60 183 4.3E-22 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Acife_2516 61c2a6e301ac6693872670ac028493df 242 SUPERFAMILY SSF69593 14 233 2.48E-38 T 12-10-2018 Acife_0373 3cd83a95d82a72c744ef15b8a39a30ec 207 Gene3D G3DSA:3.30.470.30 24 199 4.9E-33 T 12-10-2018 Acife_0373 3cd83a95d82a72c744ef15b8a39a30ec 207 SUPERFAMILY SSF56091 6 191 2.47E-35 T 12-10-2018 Acife_0373 3cd83a95d82a72c744ef15b8a39a30ec 207 Pfam PF09414 RNA ligase 38 200 1.6E-28 T 12-10-2018 IPR021122 RNA ligase domain, REL/Rln2 Acife_2119 060826f3eac33c76f35a97a9bc09160d 93 SMART SM00530 12 67 3.6E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_2119 060826f3eac33c76f35a97a9bc09160d 93 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 4 82 6.7E-29 T 12-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 Acife_2119 060826f3eac33c76f35a97a9bc09160d 93 SUPERFAMILY SSF47413 9 82 2.35E-23 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_2119 060826f3eac33c76f35a97a9bc09160d 93 Pfam PF01381 Helix-turn-helix 15 65 1.3E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_2119 060826f3eac33c76f35a97a9bc09160d 93 Gene3D G3DSA:1.10.260.40 1 91 1.6E-29 T 12-10-2018 Acife_2801 1f99d75e41f3030e5d73b72c2714c975 329 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.6E-10 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Acife_2801 1f99d75e41f3030e5d73b72c2714c975 329 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.6E-10 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Acife_2801 1f99d75e41f3030e5d73b72c2714c975 329 Gene3D G3DSA:3.90.79.10 1 126 1.3E-37 T 12-10-2018 Acife_2801 1f99d75e41f3030e5d73b72c2714c975 329 Pfam PF00293 NUDIX domain 6 110 9.9E-20 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Acife_2801 1f99d75e41f3030e5d73b72c2714c975 329 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 124 2.2E-31 T 12-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 Acife_2801 1f99d75e41f3030e5d73b72c2714c975 329 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Acife_2801 1f99d75e41f3030e5d73b72c2714c975 329 SUPERFAMILY SSF51391 131 327 3.01E-38 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Acife_2801 1f99d75e41f3030e5d73b72c2714c975 329 Gene3D G3DSA:3.20.20.70 128 328 6.5E-40 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2801 1f99d75e41f3030e5d73b72c2714c975 329 Pfam PF02581 Thiamine monophosphate synthase 136 310 9.4E-24 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Acife_2801 1f99d75e41f3030e5d73b72c2714c975 329 SUPERFAMILY SSF55811 2 129 7.72E-35 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Acife_3151 ab49de8bb13a8d39b1d10e0bbdce6147 615 Pfam PF00654 Voltage gated chloride channel 94 446 5.7E-86 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_3151 ab49de8bb13a8d39b1d10e0bbdce6147 615 SUPERFAMILY SSF81340 16 464 1.7E-98 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Acife_3151 ab49de8bb13a8d39b1d10e0bbdce6147 615 Gene3D G3DSA:3.10.580.10 478 604 2.2E-6 T 12-10-2018 Acife_3151 ab49de8bb13a8d39b1d10e0bbdce6147 615 PRINTS PR00762 Chloride channel signature 107 124 3.1E-19 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_3151 ab49de8bb13a8d39b1d10e0bbdce6147 615 PRINTS PR00762 Chloride channel signature 362 382 3.1E-19 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_3151 ab49de8bb13a8d39b1d10e0bbdce6147 615 PRINTS PR00762 Chloride channel signature 415 434 3.1E-19 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_3151 ab49de8bb13a8d39b1d10e0bbdce6147 615 PRINTS PR00762 Chloride channel signature 187 206 3.1E-19 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Acife_3151 ab49de8bb13a8d39b1d10e0bbdce6147 615 SUPERFAMILY SSF54631 477 601 5.31E-7 T 12-10-2018 Acife_3151 ab49de8bb13a8d39b1d10e0bbdce6147 615 Gene3D G3DSA:1.10.3080.10 21 465 3.9E-107 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Acife_0564 3079b3fbf6eb2f561e1a782c34e17ac1 227 Gene3D G3DSA:3.30.450.40 44 225 3.0E-31 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_0564 3079b3fbf6eb2f561e1a782c34e17ac1 227 Pfam PF04340 Protein of unknown function, DUF484 11 222 4.1E-29 T 12-10-2018 IPR007435 Protein of unknown function DUF484 Acife_0146 d65862fe8265876cd9c2cd72613625d3 365 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 19 365 8.0E-89 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Acife_0146 d65862fe8265876cd9c2cd72613625d3 365 Pfam PF02445 Quinolinate synthetase A protein 22 363 8.1E-105 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Acife_0146 d65862fe8265876cd9c2cd72613625d3 365 Hamap MF_00569 Quinolinate synthase A [nadA]. 15 364 47.724 T 12-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Acife_0146 d65862fe8265876cd9c2cd72613625d3 365 Gene3D G3DSA:3.40.50.10800 225 315 1.2E-82 T 12-10-2018 Acife_0146 d65862fe8265876cd9c2cd72613625d3 365 Gene3D G3DSA:3.40.50.10800 104 362 1.2E-82 T 12-10-2018 Acife_0146 d65862fe8265876cd9c2cd72613625d3 365 Gene3D G3DSA:3.40.50.10800 23 345 1.2E-82 T 12-10-2018 Acife_0146 d65862fe8265876cd9c2cd72613625d3 365 SUPERFAMILY SSF142754 27 363 4.58E-94 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Acife_2886 7654a46695c7ab566f27c2a9f9e20be3 274 SUPERFAMILY SSF52540 6 234 3.55E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2886 7654a46695c7ab566f27c2a9f9e20be3 274 Gene3D G3DSA:3.40.50.300 4 261 1.5E-61 T 12-10-2018 Acife_2886 7654a46695c7ab566f27c2a9f9e20be3 274 SMART SM00382 31 247 5.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2886 7654a46695c7ab566f27c2a9f9e20be3 274 Pfam PF00005 ABC transporter 23 170 5.4E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_2044 b38c563ec49c91e77fbef7a3b2580800 189 SUPERFAMILY SSF55083 15 161 4.45E-46 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Acife_2044 b38c563ec49c91e77fbef7a3b2580800 189 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 17 147 7.0E-36 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Acife_2044 b38c563ec49c91e77fbef7a3b2580800 189 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 17 147 1.2E-33 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Acife_2044 b38c563ec49c91e77fbef7a3b2580800 189 Gene3D G3DSA:3.30.70.560 14 171 4.3E-48 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Acife_0937 9c47c21afb45e4eb6d5e3e8ee2c53a30 253 SUPERFAMILY SSF53448 3 252 2.35E-53 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0937 9c47c21afb45e4eb6d5e3e8ee2c53a30 253 Pfam PF02348 Cytidylyltransferase 5 226 1.3E-46 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Acife_0937 9c47c21afb45e4eb6d5e3e8ee2c53a30 253 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 2 246 2.3E-75 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Acife_0937 9c47c21afb45e4eb6d5e3e8ee2c53a30 253 Gene3D G3DSA:3.90.550.10 1 252 3.6E-79 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0937 9c47c21afb45e4eb6d5e3e8ee2c53a30 253 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 253 37.652 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Acife_0991 b1d53a2e053a398eee6a8138d1fab5ce 269 SUPERFAMILY SSF81345 3 251 6.67E-28 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Acife_0991 b1d53a2e053a398eee6a8138d1fab5ce 269 Pfam PF00950 ABC 3 transport family 4 253 2.2E-36 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Acife_1105 d368d7a4fa46b5c4249909b76a98e57d 64 Pfam PF04384 Iron-sulphur cluster assembly 1 62 5.2E-30 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Acife_1105 d368d7a4fa46b5c4249909b76a98e57d 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 2.6E-30 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Acife_1105 d368d7a4fa46b5c4249909b76a98e57d 64 Gene3D G3DSA:1.10.10.600 1 64 5.3E-26 T 12-10-2018 IPR036762 IscX-like superfamily Acife_1105 d368d7a4fa46b5c4249909b76a98e57d 64 SUPERFAMILY SSF140319 1 62 3.01E-23 T 12-10-2018 IPR036762 IscX-like superfamily Acife_1105 d368d7a4fa46b5c4249909b76a98e57d 64 PIRSF PIRSF039003 1 64 1.6E-30 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Acife_0005 7ffbd1362856de16dd73f14634a359e0 270 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 15 236 2.5E-11 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Acife_0005 7ffbd1362856de16dd73f14634a359e0 270 SUPERFAMILY SSF56300 12 261 1.9E-28 T 12-10-2018 Acife_0955 e17ef0d4d7fe44966c6a09675b6c1bd2 176 SUPERFAMILY SSF55729 16 147 3.37E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_0955 e17ef0d4d7fe44966c6a09675b6c1bd2 176 Gene3D G3DSA:3.40.630.30 4 161 5.0E-38 T 12-10-2018 Acife_0955 e17ef0d4d7fe44966c6a09675b6c1bd2 176 Pfam PF00583 Acetyltransferase (GNAT) family 33 145 9.6E-11 T 12-10-2018 IPR000182 GNAT domain Acife_1119 802370b481892baf84541e8e6ef87236 168 Gene3D G3DSA:2.60.40.1820 30 162 5.1E-12 T 12-10-2018 Acife_1119 802370b481892baf84541e8e6ef87236 168 Pfam PF03168 Late embryogenesis abundant protein 61 153 6.5E-11 T 12-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup Acife_1119 802370b481892baf84541e8e6ef87236 168 SUPERFAMILY SSF117070 20 158 1.7E-25 T 12-10-2018 Acife_1119 802370b481892baf84541e8e6ef87236 168 SMART SM00769 40 164 4.8E-8 T 12-10-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 Acife_1557 ef453e78caeaf3a077628edb470c38df 165 Gene3D G3DSA:3.30.700.10 16 165 2.1E-18 T 12-10-2018 Acife_1557 ef453e78caeaf3a077628edb470c38df 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 5.5E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1557 ef453e78caeaf3a077628edb470c38df 165 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 35 3.2E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1557 ef453e78caeaf3a077628edb470c38df 165 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1557 ef453e78caeaf3a077628edb470c38df 165 SUPERFAMILY SSF54523 16 101 5.34E-16 T 12-10-2018 Acife_1648 0afedbaf72477332c23ad95fbd572574 519 Gene3D G3DSA:3.40.50.1980 368 480 2.3E-85 T 12-10-2018 Acife_1648 0afedbaf72477332c23ad95fbd572574 519 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 519 5.6E-260 T 12-10-2018 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Acife_1648 0afedbaf72477332c23ad95fbd572574 519 SUPERFAMILY SSF53807 3 518 9.48E-172 T 12-10-2018 Acife_1648 0afedbaf72477332c23ad95fbd572574 519 Pfam PF11844 Domain of unknown function (DUF3364) 1 56 1.2E-26 T 12-10-2018 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Acife_1648 0afedbaf72477332c23ad95fbd572574 519 Gene3D G3DSA:3.40.50.1980 70 211 1.0E-43 T 12-10-2018 Acife_1648 0afedbaf72477332c23ad95fbd572574 519 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 88 95 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Acife_1648 0afedbaf72477332c23ad95fbd572574 519 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 151 165 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Acife_1648 0afedbaf72477332c23ad95fbd572574 519 Gene3D G3DSA:3.40.50.1980 222 323 1.1E-30 T 12-10-2018 Acife_1648 0afedbaf72477332c23ad95fbd572574 519 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 70 496 3.8E-114 T 12-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Acife_1648 0afedbaf72477332c23ad95fbd572574 519 Gene3D G3DSA:1.20.89.10 324 519 2.3E-85 T 12-10-2018 Acife_0975 9596eebeed8dda20483219f68f2d5fcd 612 Pfam PF00271 Helicase conserved C-terminal domain 233 341 2.8E-28 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_0975 9596eebeed8dda20483219f68f2d5fcd 612 Gene3D G3DSA:3.30.70.330 494 567 3.7E-8 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Acife_0975 9596eebeed8dda20483219f68f2d5fcd 612 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 566 43.754 T 12-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 Acife_0975 9596eebeed8dda20483219f68f2d5fcd 612 SMART SM00490 260 341 3.3E-31 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_0975 9596eebeed8dda20483219f68f2d5fcd 612 SMART SM00487 26 224 1.3E-60 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_0975 9596eebeed8dda20483219f68f2d5fcd 612 Gene3D G3DSA:3.40.50.300 217 450 3.2E-50 T 12-10-2018 Acife_0975 9596eebeed8dda20483219f68f2d5fcd 612 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Acife_0975 9596eebeed8dda20483219f68f2d5fcd 612 SUPERFAMILY SSF52540 77 362 2.52E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0975 9596eebeed8dda20483219f68f2d5fcd 612 Pfam PF03880 DbpA RNA binding domain 494 563 5.9E-18 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Acife_0975 9596eebeed8dda20483219f68f2d5fcd 612 Pfam PF00270 DEAD/DEAH box helicase 32 196 3.6E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Acife_0975 9596eebeed8dda20483219f68f2d5fcd 612 Gene3D G3DSA:3.40.50.300 7 213 1.5E-70 T 12-10-2018 Acife_1380 73413147d3b024efca3d50183a6fddf2 165 SUPERFAMILY SSF75169 52 165 1.41E-20 T 12-10-2018 IPR027396 DsrEFH-like Acife_1380 73413147d3b024efca3d50183a6fddf2 165 Gene3D G3DSA:3.40.1260.10 49 165 1.4E-29 T 12-10-2018 IPR027396 DsrEFH-like Acife_1380 73413147d3b024efca3d50183a6fddf2 165 Pfam PF02635 DsrE/DsrF-like family 53 164 1.1E-4 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Acife_1822 dbbbad23a9aa63d1b5f34649e2bdd481 164 Gene3D G3DSA:3.40.50.1450 4 158 3.1E-26 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily Acife_1822 dbbbad23a9aa63d1b5f34649e2bdd481 164 SUPERFAMILY SSF53163 3 151 4.71E-20 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily Acife_1822 dbbbad23a9aa63d1b5f34649e2bdd481 164 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 6 149 1.5E-24 T 12-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Acife_1822 dbbbad23a9aa63d1b5f34649e2bdd481 164 Pfam PF01750 Hydrogenase maturation protease 51 145 7.6E-6 T 12-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Acife_0281 25cbf3f066dad7bca62d1aa22d3fa448 405 PRINTS PR01021 OMPA domain signature 263 279 7.6E-14 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Acife_0281 25cbf3f066dad7bca62d1aa22d3fa448 405 PRINTS PR01021 OMPA domain signature 218 240 7.6E-14 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Acife_0281 25cbf3f066dad7bca62d1aa22d3fa448 405 PRINTS PR01021 OMPA domain signature 248 263 7.6E-14 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Acife_0281 25cbf3f066dad7bca62d1aa22d3fa448 405 Pfam PF00691 OmpA family 218 312 9.1E-25 T 12-10-2018 IPR006665 OmpA-like domain Acife_0281 25cbf3f066dad7bca62d1aa22d3fa448 405 SUPERFAMILY SSF103088 211 317 8.63E-36 T 12-10-2018 IPR036737 OmpA-like domain superfamily Acife_0281 25cbf3f066dad7bca62d1aa22d3fa448 405 Gene3D G3DSA:3.30.1330.60 180 320 1.8E-40 T 12-10-2018 IPR036737 OmpA-like domain superfamily Acife_0876 544d03991773577f11ca47ca90ced95b 198 Pfam PF03692 Putative zinc- or iron-chelating domain 70 143 4.7E-12 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Acife_1276 a6b12a0b7607358094696dee7eff3f00 900 SUPERFAMILY SSF82866 253 442 1.23E-24 T 12-10-2018 Acife_1276 a6b12a0b7607358094696dee7eff3f00 900 Pfam PF03176 MMPL family 722 888 2.4E-8 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Acife_1276 a6b12a0b7607358094696dee7eff3f00 900 Pfam PF03176 MMPL family 248 441 8.1E-19 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Acife_1276 a6b12a0b7607358094696dee7eff3f00 900 SUPERFAMILY SSF82866 710 886 5.23E-26 T 12-10-2018 Acife_1276 a6b12a0b7607358094696dee7eff3f00 900 Gene3D G3DSA:1.20.1640.10 705 898 2.7E-10 T 12-10-2018 Acife_1276 a6b12a0b7607358094696dee7eff3f00 900 TIGRFAM TIGR03480 HpnN: hopanoid biosynthesis associated RND transporter like protein HpnN 21 882 0.0 T 12-10-2018 IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 Gene3D G3DSA:3.40.50.1000 474 705 6.8E-71 T 12-10-2018 IPR023214 HAD superfamily Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 Gene3D G3DSA:3.40.50.2000 28 437 9.3E-136 T 12-10-2018 Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 Pfam PF00534 Glycosyl transferases group 1 251 420 6.3E-22 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 SUPERFAMILY SSF53756 21 447 3.73E-63 T 12-10-2018 Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 Pfam PF13439 Glycosyltransferase Family 4 31 228 1.3E-12 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 Gene3D G3DSA:3.90.1070.10 559 628 6.8E-71 T 12-10-2018 Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 SUPERFAMILY SSF56784 474 680 1.27E-25 T 12-10-2018 IPR036412 HAD-like superfamily Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 Gene3D G3DSA:3.40.50.2000 224 431 9.3E-136 T 12-10-2018 Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 474 664 1.0E-16 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 TIGRFAM TIGR02471 sucr_syn_bact_C: sucrose-phosphate synthase, sucrose phosphatase-like domain 474 708 2.6E-87 T 12-10-2018 IPR012821 Sucrose phosphate synthase, sucrose phosphatase-like domain Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 TIGRFAM TIGR02472 sucr_P_syn_N: sucrose-phosphate synthase, putative, glycosyltransferase domain 7 443 1.1E-177 T 12-10-2018 IPR012822 Sucrose-phosphate synthase, glycosyltransferase domain Acife_1677 3602c485ed50946ba2c7989645c2c67f 710 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 473 708 2.5E-77 T 12-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal Acife_2281 1ffeee2aeb76e42662dce48015dc9e06 260 Gene3D G3DSA:3.40.50.1820 11 242 1.1E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_2281 1ffeee2aeb76e42662dce48015dc9e06 260 SUPERFAMILY SSF53474 7 235 3.22E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_2281 1ffeee2aeb76e42662dce48015dc9e06 260 Pfam PF12146 Serine aminopeptidase, S33 33 233 3.3E-13 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 Acife_0883 44af660f8407db7cb92ba385fa9ec5ac 699 SMART SM00487 27 232 0.0098 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_0883 44af660f8407db7cb92ba385fa9ec5ac 699 Gene3D G3DSA:3.40.50.300 258 420 3.4E-8 T 12-10-2018 Acife_0883 44af660f8407db7cb92ba385fa9ec5ac 699 Gene3D G3DSA:3.40.50.300 24 220 3.7E-8 T 12-10-2018 Acife_0883 44af660f8407db7cb92ba385fa9ec5ac 699 SUPERFAMILY SSF52540 41 395 1.69E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0809 f4e0cb8c228bf1f2b985b78746b6aec1 271 Pfam PF02353 Mycolic acid cyclopropane synthetase 215 257 1.4E-4 T 12-10-2018 Acife_2504 6b2db1f205b9b8d4c936ad4e48353f57 265 Pfam PF02698 DUF218 domain 86 250 1.3E-26 T 12-10-2018 IPR003848 Domain of unknown function DUF218 Acife_2504 6b2db1f205b9b8d4c936ad4e48353f57 265 Gene3D G3DSA:3.40.50.620 86 216 4.3E-6 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2700 66ccc30cb5e702e785649435be51b189 122 Gene3D G3DSA:2.40.150.20 1 122 1.2E-53 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Acife_2700 66ccc30cb5e702e785649435be51b189 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.1E-57 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Acife_2700 66ccc30cb5e702e785649435be51b189 122 SUPERFAMILY SSF50193 1 122 3.92E-52 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Acife_2700 66ccc30cb5e702e785649435be51b189 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_2700 66ccc30cb5e702e785649435be51b189 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.6E-54 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Acife_2700 66ccc30cb5e702e785649435be51b189 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.046 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Acife_2700 66ccc30cb5e702e785649435be51b189 122 SMART SM01374 1 122 2.2E-86 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Acife_1111 246110e230d7dd8d7ff9cb382096324f 284 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 9 280 3.6E-125 T 12-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 Acife_1111 246110e230d7dd8d7ff9cb382096324f 284 SUPERFAMILY SSF53474 4 281 5.9E-80 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_1111 246110e230d7dd8d7ff9cb382096324f 284 Gene3D G3DSA:3.40.50.1820 5 282 5.8E-87 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_1111 246110e230d7dd8d7ff9cb382096324f 284 Pfam PF00756 Putative esterase 24 274 1.1E-55 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Acife_1915 248ab13959f6d036fb733b95f543a007 266 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 37 57 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1915 248ab13959f6d036fb733b95f543a007 266 Gene3D G3DSA:3.30.700.10 39 169 9.5E-19 T 12-10-2018 Acife_1915 248ab13959f6d036fb733b95f543a007 266 Pfam PF07963 Prokaryotic N-terminal methylation motif 34 58 1.2E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1915 248ab13959f6d036fb733b95f543a007 266 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 36 59 6.2E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1915 248ab13959f6d036fb733b95f543a007 266 SUPERFAMILY SSF54523 39 138 7.32E-17 T 12-10-2018 Acife_1478 d79b7b7bbc7020877bd6253050792465 115 SUPERFAMILY SSF46785 2 93 1.03E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1478 d79b7b7bbc7020877bd6253050792465 115 Gene3D G3DSA:1.10.10.10 5 98 2.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1478 d79b7b7bbc7020877bd6253050792465 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.4E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1478 d79b7b7bbc7020877bd6253050792465 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.4E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1478 d79b7b7bbc7020877bd6253050792465 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.4E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_1478 d79b7b7bbc7020877bd6253050792465 115 Pfam PF12840 Helix-turn-helix domain 16 72 1.8E-12 T 12-10-2018 Acife_1478 d79b7b7bbc7020877bd6253050792465 115 SMART SM00418 16 93 9.7E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_2834 2c5b1a838400ffe31d4c86cfd631652e 221 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 91 119 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Acife_2834 2c5b1a838400ffe31d4c86cfd631652e 221 Gene3D G3DSA:1.10.530.10 39 197 5.8E-44 T 12-10-2018 Acife_2834 2c5b1a838400ffe31d4c86cfd631652e 221 Pfam PF13511 Domain of unknown function (DUF4124) 10 60 8.0E-8 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 Acife_2834 2c5b1a838400ffe31d4c86cfd631652e 221 Pfam PF01464 Transglycosylase SLT domain 73 169 1.9E-25 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Acife_2834 2c5b1a838400ffe31d4c86cfd631652e 221 SUPERFAMILY SSF53955 53 195 3.03E-43 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Acife_3090 242a02b70410db1da8730512cb8d9758 199 Gene3D G3DSA:3.40.109.10 1 195 1.7E-47 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Acife_3090 242a02b70410db1da8730512cb8d9758 199 Pfam PF00881 Nitroreductase family 7 177 6.6E-30 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Acife_3090 242a02b70410db1da8730512cb8d9758 199 SUPERFAMILY SSF55469 1 195 3.66E-51 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Acife_1568 fd7395f771ef1e5bc469b8819dfc95f5 149 Pfam PF11663 Toxin with endonuclease activity, of toxin-antitoxin system 8 145 1.0E-55 T 12-10-2018 IPR021679 Toxin endonuclease, YhaV GO:0004540|GO:0110001 Acife_0654 260854879c984444d9a580e99421d35f 313 Pfam PF13478 XdhC Rossmann domain 165 303 1.1E-31 T 12-10-2018 IPR027051 XdhC Rossmann domain Acife_0654 260854879c984444d9a580e99421d35f 313 Gene3D G3DSA:3.40.50.720 164 313 3.3E-35 T 12-10-2018 Acife_0654 260854879c984444d9a580e99421d35f 313 Pfam PF02625 XdhC and CoxI family 16 71 1.9E-9 T 12-10-2018 IPR003777 XdhC- CoxI Acife_2414 2a5c71d42a59de21a5035b9ee693e90a 94 Gene3D G3DSA:3.40.30.10 1 86 5.1E-25 T 12-10-2018 Acife_2414 2a5c71d42a59de21a5035b9ee693e90a 94 SUPERFAMILY SSF52833 3 88 7.4E-25 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2414 2a5c71d42a59de21a5035b9ee693e90a 94 PRINTS PR00160 Glutaredoxin signature 48 61 4.4E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup Acife_2414 2a5c71d42a59de21a5035b9ee693e90a 94 PRINTS PR00160 Glutaredoxin signature 62 75 4.4E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup Acife_2414 2a5c71d42a59de21a5035b9ee693e90a 94 PRINTS PR00160 Glutaredoxin signature 5 23 4.4E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup Acife_2414 2a5c71d42a59de21a5035b9ee693e90a 94 ProSitePatterns PS00195 Glutaredoxin active site. 7 23 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Acife_2414 2a5c71d42a59de21a5035b9ee693e90a 94 Pfam PF00462 Glutaredoxin 6 65 4.1E-18 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Acife_2414 2a5c71d42a59de21a5035b9ee693e90a 94 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 5 84 1.4E-30 T 12-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 Acife_0699 68db178d2e0573147df5811ff258949a 285 Pfam PF14342 Domain of unknown function (DUF4396) 71 208 1.2E-35 T 12-10-2018 IPR025509 Domain of unknown function DUF4396 Acife_0660 1e57796b2992c951518549d0e9296d97 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.0E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0660 1e57796b2992c951518549d0e9296d97 306 Pfam PF03466 LysR substrate binding domain 89 295 2.3E-32 T 12-10-2018 IPR005119 LysR, substrate-binding Acife_0660 1e57796b2992c951518549d0e9296d97 306 Gene3D G3DSA:3.40.190.290 91 302 4.5E-34 T 12-10-2018 Acife_0660 1e57796b2992c951518549d0e9296d97 306 SUPERFAMILY SSF53850 91 298 7.96E-31 T 12-10-2018 Acife_0660 1e57796b2992c951518549d0e9296d97 306 Gene3D G3DSA:1.10.10.10 1 89 8.8E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0660 1e57796b2992c951518549d0e9296d97 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0660 1e57796b2992c951518549d0e9296d97 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0660 1e57796b2992c951518549d0e9296d97 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_0660 1e57796b2992c951518549d0e9296d97 306 SUPERFAMILY SSF46785 3 112 9.25E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0343 de8694f694235045036875f971b1d333 209 Pfam PF00589 Phage integrase family 42 193 6.8E-20 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_0343 de8694f694235045036875f971b1d333 209 Gene3D G3DSA:1.10.443.10 23 195 1.3E-24 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_0343 de8694f694235045036875f971b1d333 209 SUPERFAMILY SSF56349 23 207 1.8E-36 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_2455 8010a047ff7be22a2fc4cc52fd2d0519 404 SUPERFAMILY SSF52768 35 348 1.2E-82 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily Acife_2455 8010a047ff7be22a2fc4cc52fd2d0519 404 Pfam PF00850 Histone deacetylase domain 51 331 5.3E-60 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Acife_2455 8010a047ff7be22a2fc4cc52fd2d0519 404 PRINTS PR01270 Histone deacetylase superfamily signature 152 175 7.4E-19 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Acife_2455 8010a047ff7be22a2fc4cc52fd2d0519 404 PRINTS PR01270 Histone deacetylase superfamily signature 266 276 7.4E-19 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Acife_2455 8010a047ff7be22a2fc4cc52fd2d0519 404 PRINTS PR01270 Histone deacetylase superfamily signature 184 199 7.4E-19 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Acife_2455 8010a047ff7be22a2fc4cc52fd2d0519 404 Gene3D G3DSA:3.40.800.20 26 393 3.5E-99 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Acife_1546 565a58d05a781a768f3acf141f425c76 92 Gene3D G3DSA:1.10.1220.10 10 51 5.5E-6 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Acife_1546 565a58d05a781a768f3acf141f425c76 92 SUPERFAMILY SSF47598 3 44 1.26E-11 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_1546 565a58d05a781a768f3acf141f425c76 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 3.1E-11 T 12-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Acife_1394 381a646ed2fb4b6eab9f289db2cb7724 226 Gene3D G3DSA:3.40.50.300 2 224 1.2E-71 T 12-10-2018 Acife_1394 381a646ed2fb4b6eab9f289db2cb7724 226 Pfam PF02224 Cytidylate kinase 7 211 6.9E-66 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Acife_1394 381a646ed2fb4b6eab9f289db2cb7724 226 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 31.252 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Acife_1394 381a646ed2fb4b6eab9f289db2cb7724 226 SUPERFAMILY SSF52540 5 221 1.33E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1394 381a646ed2fb4b6eab9f289db2cb7724 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 210 2.3E-67 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Acife_1647 eb9146d17ba6d0898ccb15f6fb58cbc5 114 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Acife_1647 eb9146d17ba6d0898ccb15f6fb58cbc5 114 SUPERFAMILY SSF54292 1 113 4.59E-12 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Acife_1647 eb9146d17ba6d0898ccb15f6fb58cbc5 114 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 16 105 7.9E-10 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Acife_1647 eb9146d17ba6d0898ccb15f6fb58cbc5 114 Gene3D G3DSA:3.10.20.30 1 114 1.2E-32 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_1229 e787637793b0105c985b646ab85283ea 96 SUPERFAMILY SSF46992 8 91 1.7E-28 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1229 e787637793b0105c985b646ab85283ea 96 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 6 90 17.297 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1229 e787637793b0105c985b646ab85283ea 96 TIGRFAM TIGR00029 S20: ribosomal protein bS20 6 90 1.4E-24 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1229 e787637793b0105c985b646ab85283ea 96 Gene3D G3DSA:1.20.58.110 6 92 4.7E-27 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1229 e787637793b0105c985b646ab85283ea 96 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 18 92 7.0E-17 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_1229 e787637793b0105c985b646ab85283ea 96 Pfam PF01649 Ribosomal protein S20 7 89 4.1E-26 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2579 14bdba86f61fda6209ede4ffa7d644ba 96 Gene3D G3DSA:3.30.460.10 2 96 5.0E-20 T 12-10-2018 Acife_2579 14bdba86f61fda6209ede4ffa7d644ba 96 SUPERFAMILY SSF81301 3 95 2.77E-16 T 12-10-2018 Acife_2579 14bdba86f61fda6209ede4ffa7d644ba 96 Pfam PF01909 Nucleotidyltransferase domain 26 87 9.8E-8 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Acife_2913 edd7b2916ccf6f57e19e95ee220a2aad 731 Pfam PF04453 Organic solvent tolerance protein 290 651 4.8E-58 T 12-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 Acife_2913 edd7b2916ccf6f57e19e95ee220a2aad 731 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 28 711 17.214 T 12-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 Acife_2913 edd7b2916ccf6f57e19e95ee220a2aad 731 Pfam PF03968 OstA-like protein 67 185 4.1E-5 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Acife_2658 2c602aa339fe11ebf67a216150d66392 230 Gene3D G3DSA:2.50.20.10 44 230 9.4E-56 T 12-10-2018 Acife_2658 2c602aa339fe11ebf67a216150d66392 230 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 31 230 29.624 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Acife_2658 2c602aa339fe11ebf67a216150d66392 230 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 56 220 3.6E-47 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Acife_2658 2c602aa339fe11ebf67a216150d66392 230 SUPERFAMILY SSF89392 49 229 2.08E-48 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Acife_2658 2c602aa339fe11ebf67a216150d66392 230 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 37 228 6.6E-30 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Acife_2079 daee660086b4f034131069c811a511c3 343 SUPERFAMILY SSF47648 19 75 3.66E-12 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Acife_2079 daee660086b4f034131069c811a511c3 343 Gene3D G3DSA:1.20.970.10 6 75 7.5E-23 T 12-10-2018 Acife_2079 daee660086b4f034131069c811a511c3 343 Gene3D G3DSA:3.40.1030.10 80 343 1.8E-92 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Acife_2079 daee660086b4f034131069c811a511c3 343 SUPERFAMILY SSF52418 87 343 4.97E-38 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Acife_2079 daee660086b4f034131069c811a511c3 343 Pfam PF02885 Glycosyl transferase family, helical bundle domain 21 70 7.7E-9 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Acife_2079 daee660086b4f034131069c811a511c3 343 Pfam PF00591 Glycosyl transferase family, a/b domain 104 340 8.7E-5 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Acife_0301 ea7021375acc2b8231852b88924acc37 539 Gene3D G3DSA:1.20.1260.30 7 151 1.0E-20 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Acife_0301 ea7021375acc2b8231852b88924acc37 539 Pfam PF12161 HsdM N-terminal domain 16 142 2.2E-19 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Acife_0301 ea7021375acc2b8231852b88924acc37 539 Gene3D G3DSA:3.40.50.150 157 456 1.4E-83 T 12-10-2018 Acife_0301 ea7021375acc2b8231852b88924acc37 539 SUPERFAMILY SSF53335 16 533 9.05E-110 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0301 ea7021375acc2b8231852b88924acc37 539 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 283 289 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Acife_0301 ea7021375acc2b8231852b88924acc37 539 Pfam PF02384 N-6 DNA Methylase 156 494 9.1E-78 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Acife_0301 ea7021375acc2b8231852b88924acc37 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 203 217 3.1E-18 T 12-10-2018 Acife_0301 ea7021375acc2b8231852b88924acc37 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 318 342 3.1E-18 T 12-10-2018 Acife_0301 ea7021375acc2b8231852b88924acc37 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 180 196 3.1E-18 T 12-10-2018 Acife_0301 ea7021375acc2b8231852b88924acc37 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 280 292 3.1E-18 T 12-10-2018 Acife_2255 ec35e28f64bdcc6b3738c920de9039f9 104 Gene3D G3DSA:1.10.260.40 21 83 1.6E-18 T 12-10-2018 Acife_2255 ec35e28f64bdcc6b3738c920de9039f9 104 SUPERFAMILY SSF47413 21 96 3.31E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_2255 ec35e28f64bdcc6b3738c920de9039f9 104 Pfam PF13744 Helix-turn-helix domain 13 91 8.7E-22 T 12-10-2018 IPR039554 HigA2-like, helix-turn-helix domain Acife_0599 5eb9034f3302ababc9b8b53b081852c6 473 Pfam PF13520 Amino acid permease 46 449 4.8E-27 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Acife_0599 5eb9034f3302ababc9b8b53b081852c6 473 PIRSF PIRSF006060 21 471 4.0E-53 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Acife_0599 5eb9034f3302ababc9b8b53b081852c6 473 Gene3D G3DSA:1.20.1740.10 23 468 7.3E-37 T 12-10-2018 Acife_3189 0fc45c937ad72b61d21e22e37e6643bf 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 83 9.7E-29 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3189 0fc45c937ad72b61d21e22e37e6643bf 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 130 3.8E-8 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Acife_3189 0fc45c937ad72b61d21e22e37e6643bf 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 85 8.0E-35 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3189 0fc45c937ad72b61d21e22e37e6643bf 141 SUPERFAMILY SSF46604 88 135 1.07E-10 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3189 0fc45c937ad72b61d21e22e37e6643bf 141 Gene3D G3DSA:2.60.15.10 2 89 6.5E-30 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3189 0fc45c937ad72b61d21e22e37e6643bf 141 SUPERFAMILY SSF51344 3 85 6.28E-24 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3189 0fc45c937ad72b61d21e22e37e6643bf 141 Gene3D G3DSA:1.20.5.440 90 132 7.2E-12 T 12-10-2018 Acife_3189 0fc45c937ad72b61d21e22e37e6643bf 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 131 2.2E-37 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3189 0fc45c937ad72b61d21e22e37e6643bf 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 130 21.694 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_0789 31d295f6f4c259fddcf1921fce630d0d 139 Pfam PF02411 MerT mercuric transport protein 33 135 8.6E-21 T 12-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 Acife_1062 ad7a82b6b3b58b619287ecc5b46829f9 171 Pfam PF12092 Protein of unknown function (DUF3568) 13 128 6.0E-14 T 12-10-2018 IPR021952 Protein of unknown function DUF3568 Acife_1324 cbbf1bc8e95dd95edacdebc45d54b4c1 325 SUPERFAMILY SSF53448 17 289 9.24E-59 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1324 cbbf1bc8e95dd95edacdebc45d54b4c1 325 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 16 277 1.5E-109 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Acife_1324 cbbf1bc8e95dd95edacdebc45d54b4c1 325 Gene3D G3DSA:3.90.550.10 6 302 4.6E-83 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1324 cbbf1bc8e95dd95edacdebc45d54b4c1 325 Pfam PF00483 Nucleotidyl transferase 24 275 1.1E-25 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Acife_1312 50397ab046af95ed3266fe432700794b 197 Hamap MF_00052_B Ribonuclease HII [rnhB]. 13 189 32.673 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 Acife_1312 50397ab046af95ed3266fe432700794b 197 Gene3D G3DSA:3.30.420.10 5 197 1.8E-64 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_1312 50397ab046af95ed3266fe432700794b 197 SUPERFAMILY SSF53098 12 193 7.13E-62 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_1312 50397ab046af95ed3266fe432700794b 197 Pfam PF01351 Ribonuclease HII 15 184 3.0E-30 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain Acife_1175 3e339624332e5ad702cf03cf19b0a307 437 PIRSF PIRSF000390 14 437 1.4E-115 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Acife_1175 3e339624332e5ad702cf03cf19b0a307 437 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 45 429 3.3E-109 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Acife_1175 3e339624332e5ad702cf03cf19b0a307 437 Gene3D G3DSA:3.90.1150.10 306 437 1.0E-50 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1175 3e339624332e5ad702cf03cf19b0a307 437 Gene3D G3DSA:3.40.640.10 1 305 5.7E-103 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1175 3e339624332e5ad702cf03cf19b0a307 437 SUPERFAMILY SSF53383 34 433 1.33E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_0572 bc58790b67683dd476ca3b352b744c5a 219 Gene3D G3DSA:3.40.50.150 24 210 4.9E-53 T 12-10-2018 Acife_0572 bc58790b67683dd476ca3b352b744c5a 219 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 204 27.887 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Acife_0572 bc58790b67683dd476ca3b352b744c5a 219 SUPERFAMILY SSF53335 27 204 4.09E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0572 bc58790b67683dd476ca3b352b744c5a 219 PIRSF PIRSF005461 1 214 2.0E-70 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Acife_0572 bc58790b67683dd476ca3b352b744c5a 219 Pfam PF01728 FtsJ-like methyltransferase 28 203 1.2E-47 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Acife_1702 1f2a553d6e982c15afeb5569b6b88f89 264 Gene3D G3DSA:3.10.270.10 6 263 6.4E-97 T 12-10-2018 Acife_1702 1f2a553d6e982c15afeb5569b6b88f89 264 Pfam PF02649 Type I GTP cyclohydrolase folE2 9 258 2.6E-94 T 12-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Acife_1702 1f2a553d6e982c15afeb5569b6b88f89 264 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 9 263 36.473 T 12-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Acife_1260 4358734f89ec4bcee2ba07b9b4bc4d4c 217 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Acife_1260 4358734f89ec4bcee2ba07b9b4bc4d4c 217 Gene3D G3DSA:3.40.50.150 1 209 1.2E-50 T 12-10-2018 Acife_1260 4358734f89ec4bcee2ba07b9b4bc4d4c 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 183 3.5E-40 T 12-10-2018 Acife_1260 4358734f89ec4bcee2ba07b9b4bc4d4c 217 SUPERFAMILY SSF53335 1 208 6.53E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0320 b5cf822c4d7c94d79f3d8b6eb58515a1 227 Pfam PF07027 Protein of unknown function (DUF1318) 130 227 7.0E-17 T 12-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 Acife_1460 e7e7ff0efec8446450a407646a49c66d 1254 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 12-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Acife_1460 e7e7ff0efec8446450a407646a49c66d 1254 Pfam PF00384 Molybdopterin oxidoreductase 108 829 7.4E-141 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1460 e7e7ff0efec8446450a407646a49c66d 1254 SMART SM00926 43 105 1.1E-8 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1460 e7e7ff0efec8446450a407646a49c66d 1254 SUPERFAMILY SSF53706 4 1065 0.0 T 12-10-2018 Acife_1460 e7e7ff0efec8446450a407646a49c66d 1254 Gene3D G3DSA:3.40.50.12440 44 1245 0.0 T 12-10-2018 Acife_1460 e7e7ff0efec8446450a407646a49c66d 1254 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 5.6E-15 T 12-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Acife_1460 e7e7ff0efec8446450a407646a49c66d 1254 SUPERFAMILY SSF50692 1084 1233 3.39E-39 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Acife_1460 e7e7ff0efec8446450a407646a49c66d 1254 Pfam PF01568 Molydopterin dinucleotide binding domain 1085 1197 6.1E-17 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Acife_1460 e7e7ff0efec8446450a407646a49c66d 1254 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Acife_2471 cfc3c7e7795f86a0f0d79ab864889df7 303 Pfam PF02754 Cysteine-rich domain 153 246 3.2E-10 T 12-10-2018 IPR004017 Cysteine-rich domain Acife_2471 cfc3c7e7795f86a0f0d79ab864889df7 303 Pfam PF02754 Cysteine-rich domain 4 87 8.9E-15 T 12-10-2018 IPR004017 Cysteine-rich domain Acife_0849 e4ae7ef3b5ce0f876b426cc3392dfe58 126 Pfam PF12802 MarR family 46 96 5.2E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Acife_0849 e4ae7ef3b5ce0f876b426cc3392dfe58 126 Gene3D G3DSA:1.10.10.10 35 101 6.3E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0849 e4ae7ef3b5ce0f876b426cc3392dfe58 126 SUPERFAMILY SSF46785 33 99 1.35E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0553 c22325d9c976b1f56ed6b4043527f900 83 Gene3D G3DSA:3.30.70.20 2 81 6.8E-33 T 12-10-2018 Acife_0553 c22325d9c976b1f56ed6b4043527f900 83 Pfam PF00037 4Fe-4S binding domain 5 25 2.9E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_0553 c22325d9c976b1f56ed6b4043527f900 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_0553 c22325d9c976b1f56ed6b4043527f900 83 SUPERFAMILY SSF54862 5 67 6.88E-20 T 12-10-2018 Acife_3161 357a1db284aa26626a69f5555b6eca23 502 Gene3D G3DSA:1.20.1720.10 31 268 1.7E-50 T 12-10-2018 Acife_3161 357a1db284aa26626a69f5555b6eca23 502 SUPERFAMILY SSF103473 18 482 2.22E-63 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_3161 357a1db284aa26626a69f5555b6eca23 502 Pfam PF07690 Major Facilitator Superfamily 36 427 3.8E-52 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_3161 357a1db284aa26626a69f5555b6eca23 502 Gene3D G3DSA:1.20.1250.20 276 487 1.3E-18 T 12-10-2018 Acife_3161 357a1db284aa26626a69f5555b6eca23 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 154 178 4.5E-7 T 12-10-2018 Acife_3161 357a1db284aa26626a69f5555b6eca23 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 34 58 4.5E-7 T 12-10-2018 Acife_3161 357a1db284aa26626a69f5555b6eca23 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 93 115 4.5E-7 T 12-10-2018 Acife_3161 357a1db284aa26626a69f5555b6eca23 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 219 237 4.5E-7 T 12-10-2018 Acife_3161 357a1db284aa26626a69f5555b6eca23 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 376 396 4.5E-7 T 12-10-2018 Acife_0141 7d821b603e6907c3745ae05e30bfb804 341 Gene3D G3DSA:1.10.10.10 258 335 4.8E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0141 7d821b603e6907c3745ae05e30bfb804 341 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 11 236 2.0E-113 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Acife_0141 7d821b603e6907c3745ae05e30bfb804 341 SMART SM00382 52 183 5.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0141 7d821b603e6907c3745ae05e30bfb804 341 SUPERFAMILY SSF46785 258 331 2.8E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0141 7d821b603e6907c3745ae05e30bfb804 341 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 329 6.0E-26 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Acife_0141 7d821b603e6907c3745ae05e30bfb804 341 Gene3D G3DSA:1.10.8.60 183 256 1.8E-30 T 12-10-2018 Acife_0141 7d821b603e6907c3745ae05e30bfb804 341 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 3.9E-29 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Acife_0141 7d821b603e6907c3745ae05e30bfb804 341 Gene3D G3DSA:3.40.50.300 19 182 1.9E-36 T 12-10-2018 Acife_0141 7d821b603e6907c3745ae05e30bfb804 341 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 341 167.34 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Acife_0141 7d821b603e6907c3745ae05e30bfb804 341 SUPERFAMILY SSF52540 21 252 1.69E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0141 7d821b603e6907c3745ae05e30bfb804 341 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 327 2.4E-138 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Acife_1815 90c1d2f4d966b82f946ba20b15e55e69 1112 Pfam PF00176 SNF2 family N-terminal domain 658 927 1.8E-57 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Acife_1815 90c1d2f4d966b82f946ba20b15e55e69 1112 Gene3D G3DSA:3.40.50.300 862 1064 1.9E-79 T 12-10-2018 Acife_1815 90c1d2f4d966b82f946ba20b15e55e69 1112 SUPERFAMILY SSF52540 606 855 2.94E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1815 90c1d2f4d966b82f946ba20b15e55e69 1112 SMART SM00490 970 1050 3.0E-20 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1815 90c1d2f4d966b82f946ba20b15e55e69 1112 Pfam PF00271 Helicase conserved C-terminal domain 941 1050 8.9E-17 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1815 90c1d2f4d966b82f946ba20b15e55e69 1112 Gene3D G3DSA:1.20.120.850 877 1093 1.9E-79 T 12-10-2018 Acife_1815 90c1d2f4d966b82f946ba20b15e55e69 1112 SUPERFAMILY SSF52540 857 1104 1.36E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1815 90c1d2f4d966b82f946ba20b15e55e69 1112 Gene3D G3DSA:3.40.50.10810 645 856 2.2E-62 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Acife_1815 90c1d2f4d966b82f946ba20b15e55e69 1112 SMART SM00487 640 827 7.8E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_2719 8a3729104d666b5e06e128bb7ded8678 173 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 12-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2719 8a3729104d666b5e06e128bb7ded8678 173 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 24.712 T 12-10-2018 IPR022973 Ribosomal protein L10 Acife_2719 8a3729104d666b5e06e128bb7ded8678 173 Gene3D G3DSA:3.30.70.1730 4 133 6.2E-34 T 12-10-2018 Acife_2719 8a3729104d666b5e06e128bb7ded8678 173 SUPERFAMILY SSF160369 4 170 7.59E-49 T 12-10-2018 Acife_2719 8a3729104d666b5e06e128bb7ded8678 173 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 26 164 7.0E-4 T 12-10-2018 Acife_2719 8a3729104d666b5e06e128bb7ded8678 173 Pfam PF00466 Ribosomal protein L10 6 100 1.1E-21 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Acife_2778 2c8c58116755452d294b1d3c139a3b59 259 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 22 242 2.5E-56 T 12-10-2018 IPR005226 UPF0014 family Acife_2778 2c8c58116755452d294b1d3c139a3b59 259 Pfam PF03649 Uncharacterised protein family (UPF0014) 17 247 5.4E-65 T 12-10-2018 IPR005226 UPF0014 family Acife_3046 6777b49688714883c41fdd386ae4bd4e 275 SUPERFAMILY SSF52833 121 264 7.78E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_3046 6777b49688714883c41fdd386ae4bd4e 275 Pfam PF13098 Thioredoxin-like domain 141 259 2.7E-9 T 12-10-2018 IPR012336 Thioredoxin-like fold Acife_3046 6777b49688714883c41fdd386ae4bd4e 275 Gene3D G3DSA:3.10.450.70 39 105 1.5E-8 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Acife_3046 6777b49688714883c41fdd386ae4bd4e 275 Gene3D G3DSA:3.40.30.10 130 272 4.1E-32 T 12-10-2018 Acife_2000 7e6ba906f0a046956c185dbef16c19f6 448 SUPERFAMILY SSF51556 69 368 4.54E-96 T 12-10-2018 IPR032466 Metal-dependent hydrolase Acife_2000 7e6ba906f0a046956c185dbef16c19f6 448 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 12 442 39.34 T 12-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 Acife_2000 7e6ba906f0a046956c185dbef16c19f6 448 Gene3D G3DSA:3.20.20.140 70 360 1.5E-158 T 12-10-2018 Acife_2000 7e6ba906f0a046956c185dbef16c19f6 448 Gene3D G3DSA:2.30.40.10 25 435 1.5E-158 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Acife_2000 7e6ba906f0a046956c185dbef16c19f6 448 Pfam PF01979 Amidohydrolase family 66 415 3.2E-66 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Acife_2000 7e6ba906f0a046956c185dbef16c19f6 448 SUPERFAMILY SSF51338 12 442 1.73E-27 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Acife_0173 eb354f04c8f7949ac51001944d75ae91 141 Gene3D G3DSA:2.20.25.10 1 32 1.1E-6 T 12-10-2018 Acife_0173 eb354f04c8f7949ac51001944d75ae91 141 Gene3D G3DSA:3.30.300.20 41 138 2.8E-30 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Acife_0173 eb354f04c8f7949ac51001944d75ae91 141 Pfam PF02566 OsmC-like protein 36 131 2.9E-18 T 12-10-2018 IPR003718 OsmC/Ohr family Acife_0173 eb354f04c8f7949ac51001944d75ae91 141 SUPERFAMILY SSF82784 2 137 4.32E-38 T 12-10-2018 IPR036102 OsmC/Ohr superfamily Acife_1869 4167cc4c1e65eadae0740131b6231617 254 Gene3D G3DSA:2.60.40.2600 132 253 1.1E-39 T 12-10-2018 Acife_1869 4167cc4c1e65eadae0740131b6231617 254 SUPERFAMILY SSF49503 133 251 4.99E-34 T 12-10-2018 IPR008972 Cupredoxin Acife_1869 4167cc4c1e65eadae0740131b6231617 254 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 160 238 1.2E-8 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1869 4167cc4c1e65eadae0740131b6231617 254 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 179 233 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2544 c0de12395f8771c0da11e52d355130ba 105 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 6 105 21.018 T 12-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Acife_2544 c0de12395f8771c0da11e52d355130ba 105 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 11 100 4.9E-23 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Acife_0875 385bfceb0d4eaf6a7d680634521f6667 1783 SUPERFAMILY SSF52540 276 455 9.02E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2198 42d8d4b2d1f7ea554648ef36a46444f4 399 PIRSF PIRSF001413 3 399 3.3E-167 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_2198 42d8d4b2d1f7ea554648ef36a46444f4 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 57 382 1.6E-46 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Acife_2198 42d8d4b2d1f7ea554648ef36a46444f4 399 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 393 4.8E-190 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_2198 42d8d4b2d1f7ea554648ef36a46444f4 399 Gene3D G3DSA:3.40.50.1100 14 210 7.6E-189 T 12-10-2018 Acife_2198 42d8d4b2d1f7ea554648ef36a46444f4 399 SUPERFAMILY SSF53686 7 392 5.37E-147 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Acife_2198 42d8d4b2d1f7ea554648ef36a46444f4 399 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_2198 42d8d4b2d1f7ea554648ef36a46444f4 399 Gene3D G3DSA:3.40.50.1100 58 388 7.6E-189 T 12-10-2018 Acife_2198 42d8d4b2d1f7ea554648ef36a46444f4 399 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 395 53.296 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Acife_2998 c18b85384bf148fc9678286cefeac8be 186 Pfam PF02163 Peptidase family M50 109 158 3.8E-8 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Acife_2998 c18b85384bf148fc9678286cefeac8be 186 Pfam PF02163 Peptidase family M50 15 101 1.3E-6 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Acife_1204 f3430e8c457d7ccd303d2cc9f6fdc6b2 98 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 56 1.0E-14 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Acife_1204 f3430e8c457d7ccd303d2cc9f6fdc6b2 98 Gene3D G3DSA:1.10.1220.10 2 51 4.4E-12 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Acife_1204 f3430e8c457d7ccd303d2cc9f6fdc6b2 98 Pfam PF04221 RelB antitoxin 4 51 6.4E-14 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Acife_0709 a145e6fc088dab5468c7d10b8a12fbfe 194 Gene3D G3DSA:3.90.1590.10 1 193 3.4E-89 T 12-10-2018 Acife_0709 a145e6fc088dab5468c7d10b8a12fbfe 194 TIGRFAM TIGR02820 formald_GSH: S-(hydroxymethyl)glutathione synthase 7 188 1.2E-96 T 12-10-2018 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Acife_0709 a145e6fc088dab5468c7d10b8a12fbfe 194 Hamap MF_00723 Glutathione-dependent formaldehyde-activating enzyme [gfa]. 1 194 122.66 T 12-10-2018 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Acife_0709 a145e6fc088dab5468c7d10b8a12fbfe 194 SUPERFAMILY SSF51316 4 191 1.15E-49 T 12-10-2018 IPR011057 Mss4-like superfamily Acife_0709 a145e6fc088dab5468c7d10b8a12fbfe 194 PIRSF PIRSF033318 4 192 1.9E-98 T 12-10-2018 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Acife_0709 a145e6fc088dab5468c7d10b8a12fbfe 194 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 49 115 1.1E-9 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Acife_0800 ed2534e6f4429927fdec84becc35ee6b 330 SUPERFAMILY SSF52518 2 203 2.36E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_0800 ed2534e6f4429927fdec84becc35ee6b 330 SMART SM00861 4 179 6.8E-55 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Acife_0800 ed2534e6f4429927fdec84becc35ee6b 330 Pfam PF02780 Transketolase, C-terminal domain 194 315 3.6E-36 T 12-10-2018 IPR033248 Transketolase, C-terminal domain Acife_0800 ed2534e6f4429927fdec84becc35ee6b 330 SUPERFAMILY SSF52922 190 323 1.7E-35 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Acife_0800 ed2534e6f4429927fdec84becc35ee6b 330 Gene3D G3DSA:3.40.50.970 3 190 2.4E-73 T 12-10-2018 Acife_0800 ed2534e6f4429927fdec84becc35ee6b 330 Gene3D G3DSA:3.40.50.920 191 324 3.0E-40 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Acife_0800 ed2534e6f4429927fdec84becc35ee6b 330 Pfam PF02779 Transketolase, pyrimidine binding domain 4 177 4.2E-40 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Acife_1986 952b5eef7f20931394a90d8d3928f3eb 151 Pfam PF01553 Acyltransferase 25 131 1.9E-6 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Acife_1986 952b5eef7f20931394a90d8d3928f3eb 151 SMART SM00563 20 138 0.0076 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Acife_1986 952b5eef7f20931394a90d8d3928f3eb 151 SUPERFAMILY SSF69593 22 130 8.89E-8 T 12-10-2018 Acife_0637 0947d74f16dfc9ab09397575f8e71375 390 Gene3D G3DSA:3.30.70.150 2 108 9.7E-18 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_0637 0947d74f16dfc9ab09397575f8e71375 390 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 114 264 3.3E-22 T 12-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_0637 0947d74f16dfc9ab09397575f8e71375 390 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 307 387 4.2E-10 T 12-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_0637 0947d74f16dfc9ab09397575f8e71375 390 SUPERFAMILY SSF51649 109 388 1.96E-67 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_0637 0947d74f16dfc9ab09397575f8e71375 390 Gene3D G3DSA:3.20.20.110 109 390 1.0E-74 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_0637 0947d74f16dfc9ab09397575f8e71375 390 SUPERFAMILY SSF54966 4 106 2.75E-18 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Acife_0866 ff74a4b70fb3d560b18b5693bf336e9e 376 Gene3D G3DSA:3.40.50.1100 62 158 2.6E-115 T 12-10-2018 Acife_0866 ff74a4b70fb3d560b18b5693bf336e9e 376 PIRSF PIRSF038945 1 375 2.4E-153 T 12-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Acife_0866 ff74a4b70fb3d560b18b5693bf336e9e 376 TIGRFAM TIGR00260 thrC: threonine synthase 9 350 1.2E-87 T 12-10-2018 IPR004450 Threonine synthase-like Acife_0866 ff74a4b70fb3d560b18b5693bf336e9e 376 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 343 1.7E-66 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Acife_0866 ff74a4b70fb3d560b18b5693bf336e9e 376 SUPERFAMILY SSF53686 6 375 3.76E-97 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Acife_0866 ff74a4b70fb3d560b18b5693bf336e9e 376 Gene3D G3DSA:3.40.50.1100 14 350 2.6E-115 T 12-10-2018 Acife_0866 ff74a4b70fb3d560b18b5693bf336e9e 376 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Acife_0558 a903bf65783efce72ca20c9091904079 301 Gene3D G3DSA:3.30.70.3040 47 157 2.3E-9 T 12-10-2018 Acife_0558 a903bf65783efce72ca20c9091904079 301 PIRSF PIRSF003097 5 298 1.2E-67 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Acife_1290 751a6bd96d8bf33bb0955142194bc4f6 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 278 4.1E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Acife_1290 751a6bd96d8bf33bb0955142194bc4f6 284 Gene3D G3DSA:1.10.3720.10 65 282 5.8E-24 T 12-10-2018 IPR035906 MetI-like superfamily Acife_1290 751a6bd96d8bf33bb0955142194bc4f6 284 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 21 280 1.2E-82 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Acife_1290 751a6bd96d8bf33bb0955142194bc4f6 284 SUPERFAMILY SSF161098 26 273 7.48E-28 T 12-10-2018 IPR035906 MetI-like superfamily Acife_0189 26ddf72d835856f690b3d4a7dd748587 314 PIRSF PIRSF004532 4 314 1.8E-113 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Acife_0189 26ddf72d835856f690b3d4a7dd748587 314 SUPERFAMILY SSF56655 4 312 6.71E-81 T 12-10-2018 Acife_0189 26ddf72d835856f690b3d4a7dd748587 314 Gene3D G3DSA:3.40.190.90 112 266 3.0E-113 T 12-10-2018 Acife_0189 26ddf72d835856f690b3d4a7dd748587 314 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 6 311 1.1E-93 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Acife_0189 26ddf72d835856f690b3d4a7dd748587 314 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 6 310 3.0E-115 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Acife_0189 26ddf72d835856f690b3d4a7dd748587 314 Gene3D G3DSA:3.30.540.10 9 309 3.0E-113 T 12-10-2018 Acife_0485 b7c4acfa1148da073e79cccc88abc0a3 374 Pfam PF04966 Carbohydrate-selective porin, OprB family 67 368 8.7E-14 T 12-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 Acife_0485 b7c4acfa1148da073e79cccc88abc0a3 374 Gene3D G3DSA:2.40.160.180 30 368 2.4E-46 T 12-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily Acife_0229 1d0d557af2c942ef9876dd7dae4f71ff 81 SUPERFAMILY SSF52833 4 80 1.11E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0229 1d0d557af2c942ef9876dd7dae4f71ff 81 Gene3D G3DSA:3.40.30.10 4 80 8.3E-15 T 12-10-2018 Acife_0229 1d0d557af2c942ef9876dd7dae4f71ff 81 Pfam PF00462 Glutaredoxin 5 61 1.2E-12 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Acife_1170 27bcc7423a69362ba0ac9f631a6c13a3 402 Pfam PF13579 Glycosyl transferase 4-like domain 16 193 1.6E-14 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Acife_1170 27bcc7423a69362ba0ac9f631a6c13a3 402 Pfam PF00534 Glycosyl transferases group 1 228 374 6.1E-28 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_1170 27bcc7423a69362ba0ac9f631a6c13a3 402 Gene3D G3DSA:3.40.50.2000 1 212 1.0E-21 T 12-10-2018 Acife_1170 27bcc7423a69362ba0ac9f631a6c13a3 402 SUPERFAMILY SSF53756 1 395 2.88E-62 T 12-10-2018 Acife_1170 27bcc7423a69362ba0ac9f631a6c13a3 402 Gene3D G3DSA:3.40.50.2000 218 378 1.0E-35 T 12-10-2018 Acife_2555 e7b244eb4615fc98d5d7bee3bc928fe7 130 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.9E-30 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Acife_2555 e7b244eb4615fc98d5d7bee3bc928fe7 130 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 1.9E-30 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Acife_2555 e7b244eb4615fc98d5d7bee3bc928fe7 130 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 1.9E-30 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Acife_2555 e7b244eb4615fc98d5d7bee3bc928fe7 130 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.9E-30 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Acife_2555 e7b244eb4615fc98d5d7bee3bc928fe7 130 Pfam PF03840 Preprotein translocase SecG subunit 4 73 3.6E-20 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Acife_2555 e7b244eb4615fc98d5d7bee3bc928fe7 130 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 74 1.8E-25 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Acife_2497 c5cbea907d4e6761dc494c2e37ea3758 158 PIRSF PIRSF018472 1 156 9.7E-30 T 12-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type Acife_2497 c5cbea907d4e6761dc494c2e37ea3758 158 Pfam PF04093 rod shape-determining protein MreD 6 146 8.4E-11 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Acife_2497 c5cbea907d4e6761dc494c2e37ea3758 158 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 3 146 2.1E-23 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Acife_1691 e1c02324a8f0c1a2ae54a39fb489dc37 255 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 11 237 1.4E-59 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Acife_1691 e1c02324a8f0c1a2ae54a39fb489dc37 255 Pfam PF00149 Calcineurin-like phosphoesterase 10 216 1.6E-9 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Acife_1691 e1c02324a8f0c1a2ae54a39fb489dc37 255 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 255 80.051 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Acife_1691 e1c02324a8f0c1a2ae54a39fb489dc37 255 SUPERFAMILY SSF56300 11 234 9.35E-23 T 12-10-2018 Acife_1695 bd1e8140e749d2ed621a16415a3ac4f1 446 Pfam PF13742 OB-fold nucleic acid binding domain 11 103 3.4E-27 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Acife_1695 bd1e8140e749d2ed621a16415a3ac4f1 446 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 441 4.9E-134 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Acife_1695 bd1e8140e749d2ed621a16415a3ac4f1 446 Pfam PF02601 Exonuclease VII, large subunit 127 438 5.5E-93 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Acife_1695 bd1e8140e749d2ed621a16415a3ac4f1 446 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 8 442 26.631 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Acife_2687 b30c4f9118711a16f7648495f066516d 37 SUPERFAMILY SSF57840 1 37 1.18E-16 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2687 b30c4f9118711a16f7648495f066516d 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.393 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2687 b30c4f9118711a16f7648495f066516d 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-8 T 12-10-2018 Acife_2687 b30c4f9118711a16f7648495f066516d 37 Pfam PF00444 Ribosomal protein L36 1 37 4.3E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2687 b30c4f9118711a16f7648495f066516d 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2687 b30c4f9118711a16f7648495f066516d 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 9.3E-22 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_1531 d3ef969726b1d381c604c788daeac655 120 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 120 2.4E-47 T 12-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 Acife_1531 d3ef969726b1d381c604c788daeac655 120 Gene3D G3DSA:3.40.30.10 1 110 1.4E-44 T 12-10-2018 Acife_2066 8b718fb058ee87e1988c58d9eb5ec456 153 Pfam PF00042 Globin 5 97 9.6E-10 T 12-10-2018 IPR000971 Globin GO:0020037 Acife_2066 8b718fb058ee87e1988c58d9eb5ec456 153 Gene3D G3DSA:1.10.490.10 2 138 1.5E-38 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Acife_2066 8b718fb058ee87e1988c58d9eb5ec456 153 SUPERFAMILY SSF46458 5 131 1.01E-32 T 12-10-2018 IPR009050 Globin-like superfamily Acife_0580 5d2d9c0f66785fd9f469c32a3e17f1ff 487 Pfam PF08323 Starch synthase catalytic domain 4 239 6.3E-69 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Acife_0580 5d2d9c0f66785fd9f469c32a3e17f1ff 487 SUPERFAMILY SSF53756 6 482 1.12E-120 T 12-10-2018 Acife_0580 5d2d9c0f66785fd9f469c32a3e17f1ff 487 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 3 478 1.9E-164 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Acife_0580 5d2d9c0f66785fd9f469c32a3e17f1ff 487 Hamap MF_00484 Glycogen synthase [glgA]. 2 479 42.591 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Acife_0580 5d2d9c0f66785fd9f469c32a3e17f1ff 487 Pfam PF00534 Glycosyl transferases group 1 297 441 7.0E-14 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_0580 5d2d9c0f66785fd9f469c32a3e17f1ff 487 Gene3D G3DSA:3.40.50.2000 253 463 3.9E-175 T 12-10-2018 Acife_0580 5d2d9c0f66785fd9f469c32a3e17f1ff 487 Gene3D G3DSA:3.40.50.2000 5 477 3.9E-175 T 12-10-2018 Acife_1416 dbca08ddf8a030ffca824067bf5a8fcf 363 SUPERFAMILY SSF111369 60 273 2.48E-43 T 12-10-2018 Acife_1416 dbca08ddf8a030ffca824067bf5a8fcf 363 Gene3D G3DSA:2.40.30.170 58 279 2.9E-72 T 12-10-2018 Acife_1416 dbca08ddf8a030ffca824067bf5a8fcf 363 Gene3D G3DSA:2.40.50.100 68 196 2.9E-72 T 12-10-2018 Acife_1416 dbca08ddf8a030ffca824067bf5a8fcf 363 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 357 6.8E-80 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Acife_1416 dbca08ddf8a030ffca824067bf5a8fcf 363 Gene3D G3DSA:2.40.420.20 280 354 2.9E-72 T 12-10-2018 Acife_1416 dbca08ddf8a030ffca824067bf5a8fcf 363 Gene3D G3DSA:1.10.287.470 103 162 2.9E-72 T 12-10-2018 Acife_1416 dbca08ddf8a030ffca824067bf5a8fcf 363 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 268 5.6E-26 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_0122 2a207affa3e52084685611967ee0ace3 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 123 18.434 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Acife_0122 2a207affa3e52084685611967ee0ace3 125 TIGRFAM TIGR00494 crcB: protein CrcB 8 121 7.4E-25 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Acife_0122 2a207affa3e52084685611967ee0ace3 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 118 6.1E-23 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Acife_3054 e1a1054407561429ce240b1b42509544 456 Pfam PF14239 RRXRR protein 3 190 2.3E-63 T 12-10-2018 IPR025938 RRXRR domain Acife_3054 e1a1054407561429ce240b1b42509544 456 SMART SM00507 196 247 1.6E-12 T 12-10-2018 IPR003615 HNH nuclease Acife_3054 e1a1054407561429ce240b1b42509544 456 Gene3D G3DSA:3.30.40.60 174 302 1.7E-16 T 12-10-2018 Acife_3054 e1a1054407561429ce240b1b42509544 456 Pfam PF14279 HNH endonuclease 209 252 1.5E-11 T 12-10-2018 IPR029471 HNH endonuclease 5 Acife_2088 4e6202e4f9395e8c9bfc63440121f4c9 556 Pfam PF00990 Diguanylate cyclase, GGDEF domain 128 284 8.9E-54 T 12-10-2018 IPR000160 GGDEF domain Acife_2088 4e6202e4f9395e8c9bfc63440121f4c9 556 Gene3D G3DSA:3.20.20.450 303 555 2.8E-100 T 12-10-2018 IPR035919 EAL domain superfamily Acife_2088 4e6202e4f9395e8c9bfc63440121f4c9 556 Gene3D G3DSA:3.30.70.270 122 302 8.6E-65 T 12-10-2018 Acife_2088 4e6202e4f9395e8c9bfc63440121f4c9 556 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 125 288 5.0E-45 T 12-10-2018 IPR000160 GGDEF domain Acife_2088 4e6202e4f9395e8c9bfc63440121f4c9 556 SUPERFAMILY SSF55073 133 291 8.37E-55 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_2088 4e6202e4f9395e8c9bfc63440121f4c9 556 SMART SM00267 117 289 9.5E-69 T 12-10-2018 IPR000160 GGDEF domain Acife_2088 4e6202e4f9395e8c9bfc63440121f4c9 556 SMART SM00052 299 545 3.5E-113 T 12-10-2018 IPR001633 EAL domain Acife_2088 4e6202e4f9395e8c9bfc63440121f4c9 556 Pfam PF00563 EAL domain 306 540 8.0E-72 T 12-10-2018 IPR001633 EAL domain Acife_2088 4e6202e4f9395e8c9bfc63440121f4c9 556 SUPERFAMILY SSF141868 306 551 1.7E-88 T 12-10-2018 IPR035919 EAL domain superfamily Acife_0437 12d130711cd04964db1a25995055bc73 998 Gene3D G3DSA:3.40.50.300 726 884 1.7E-9 T 12-10-2018 Acife_0437 12d130711cd04964db1a25995055bc73 998 SUPERFAMILY SSF52540 425 871 5.84E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1464 040998746dc134e8dbec1dcccacdec9d 216 SUPERFAMILY SSF52833 2 89 8.08E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1464 040998746dc134e8dbec1dcccacdec9d 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 79 3.0E-12 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Acife_1464 040998746dc134e8dbec1dcccacdec9d 216 Gene3D G3DSA:3.40.30.10 8 200 2.7E-48 T 12-10-2018 Acife_1464 040998746dc134e8dbec1dcccacdec9d 216 SUPERFAMILY SSF47616 77 202 6.82E-16 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Acife_1464 040998746dc134e8dbec1dcccacdec9d 216 Gene3D G3DSA:1.20.1050.10 81 198 2.7E-48 T 12-10-2018 Acife_1464 040998746dc134e8dbec1dcccacdec9d 216 Pfam PF00043 Glutathione S-transferase, C-terminal domain 148 199 5.6E-5 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal Acife_0244 93e7c46df0e55a1b5c0881e308b9e211 112 PIRSF PIRSF039144 1 112 3.6E-54 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0244 93e7c46df0e55a1b5c0881e308b9e211 112 SUPERFAMILY SSF54913 1 112 3.5E-45 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Acife_0244 93e7c46df0e55a1b5c0881e308b9e211 112 SMART SM00938 4 105 2.2E-66 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0244 93e7c46df0e55a1b5c0881e308b9e211 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.5E-42 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0244 93e7c46df0e55a1b5c0881e308b9e211 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Acife_0244 93e7c46df0e55a1b5c0881e308b9e211 112 PRINTS PR00340 P-II protein signature 2 17 1.0E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0244 93e7c46df0e55a1b5c0881e308b9e211 112 PRINTS PR00340 P-II protein signature 83 103 1.0E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0244 93e7c46df0e55a1b5c0881e308b9e211 112 PRINTS PR00340 P-II protein signature 23 41 1.0E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0244 93e7c46df0e55a1b5c0881e308b9e211 112 PRINTS PR00340 P-II protein signature 52 75 1.0E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Acife_0244 93e7c46df0e55a1b5c0881e308b9e211 112 Gene3D G3DSA:3.30.70.120 1 112 4.3E-46 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Acife_0244 93e7c46df0e55a1b5c0881e308b9e211 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Acife_0617 67021640fb05b1413c74647adffc83db 270 PIRSF PIRSF000005 29 266 4.4E-66 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Acife_0617 67021640fb05b1413c74647adffc83db 270 Pfam PF00034 Cytochrome c 93 160 2.0E-5 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0617 67021640fb05b1413c74647adffc83db 270 Pfam PF00034 Cytochrome c 177 264 1.1E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0617 67021640fb05b1413c74647adffc83db 270 Gene3D G3DSA:1.10.760.10 86 165 2.8E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_0617 67021640fb05b1413c74647adffc83db 270 SUPERFAMILY SSF46626 174 264 1.6E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_0617 67021640fb05b1413c74647adffc83db 270 Gene3D G3DSA:1.10.760.10 170 264 3.0E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_0617 67021640fb05b1413c74647adffc83db 270 SUPERFAMILY SSF46626 92 164 1.6E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_0785 4135433114ac750100128888e1f6b754 359 Hamap MF_00493 Transaldolase [tal]. 1 359 106.87 T 12-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Acife_0785 4135433114ac750100128888e1f6b754 359 Gene3D G3DSA:3.20.20.70 3 353 2.8E-127 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_0785 4135433114ac750100128888e1f6b754 359 TIGRFAM TIGR00876 tal_mycobact: transaldolase 13 350 1.1E-76 T 12-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Acife_0785 4135433114ac750100128888e1f6b754 359 SUPERFAMILY SSF51569 10 355 1.71E-63 T 12-10-2018 Acife_0785 4135433114ac750100128888e1f6b754 359 PIRSF PIRSF036915 1 359 2.0E-111 T 12-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Acife_0785 4135433114ac750100128888e1f6b754 359 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 16 352 3.6E-68 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Acife_0096 e7baef5df5016498e8d0e429ad6cbf08 195 Gene3D G3DSA:3.30.1060.10 7 183 2.0E-61 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Acife_0096 e7baef5df5016498e8d0e429ad6cbf08 195 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 18 178 34.536 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Acife_0096 e7baef5df5016498e8d0e429ad6cbf08 195 Pfam PF01625 Peptide methionine sulfoxide reductase 21 173 7.1E-58 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Acife_0096 e7baef5df5016498e8d0e429ad6cbf08 195 SUPERFAMILY SSF55068 20 184 5.89E-67 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Acife_0096 e7baef5df5016498e8d0e429ad6cbf08 195 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 21 170 1.2E-51 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Acife_3101 64ce70b6e8806a63e03928904c272f28 111 Pfam PF11191 Protein of unknown function (DUF2782) 36 111 2.5E-23 T 12-10-2018 IPR021357 Protein of unknown function DUF2782 Acife_3101 64ce70b6e8806a63e03928904c272f28 111 Gene3D G3DSA:2.20.130.30 37 111 3.2E-16 T 12-10-2018 Acife_1030 ce194d6a86a9a8f3276b33caa207a51e 212 Pfam PF00510 Cytochrome c oxidase subunit III 31 209 3.6E-11 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1030 ce194d6a86a9a8f3276b33caa207a51e 212 Gene3D G3DSA:1.20.120.80 24 211 4.9E-36 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1030 ce194d6a86a9a8f3276b33caa207a51e 212 SUPERFAMILY SSF81452 26 209 1.09E-36 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_3069 9ed25aea58b6a5494784973fdc92e93f 121 Pfam PF13730 Helix-turn-helix domain 51 82 4.2E-7 T 12-10-2018 Acife_3069 9ed25aea58b6a5494784973fdc92e93f 121 Gene3D G3DSA:1.10.10.10 26 111 2.1E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_3069 9ed25aea58b6a5494784973fdc92e93f 121 SUPERFAMILY SSF46785 55 97 1.13E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1692 d520aa0b5fb81621919aca7659bc0838 170 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 159 3.3E-48 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Acife_1692 d520aa0b5fb81621919aca7659bc0838 170 SUPERFAMILY SSF50891 2 162 5.84E-58 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Acife_1692 d520aa0b5fb81621919aca7659bc0838 170 Gene3D G3DSA:2.40.100.10 2 165 3.5E-66 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Acife_1692 d520aa0b5fb81621919aca7659bc0838 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 1.8E-14 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Acife_1692 d520aa0b5fb81621919aca7659bc0838 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 1.8E-14 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Acife_1692 d520aa0b5fb81621919aca7659bc0838 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 1.8E-14 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Acife_1692 d520aa0b5fb81621919aca7659bc0838 170 PIRSF PIRSF001467 1 166 3.0E-29 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Acife_1692 d520aa0b5fb81621919aca7659bc0838 170 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Acife_0766 7e2b5329ca82858f075d95df887ab98d 125 Pfam PF02635 DsrE/DsrF-like family 10 100 2.0E-9 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Acife_0766 7e2b5329ca82858f075d95df887ab98d 125 SUPERFAMILY SSF75169 8 125 3.53E-16 T 12-10-2018 IPR027396 DsrEFH-like Acife_0766 7e2b5329ca82858f075d95df887ab98d 125 Gene3D G3DSA:3.40.1260.10 1 125 1.2E-26 T 12-10-2018 IPR027396 DsrEFH-like Acife_0174 91020ddb554b115efac3550f9d7baae0 263 SUPERFAMILY SSF51366 12 261 1.29E-84 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Acife_0174 91020ddb554b115efac3550f9d7baae0 263 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 259 1.2E-90 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Acife_0174 91020ddb554b115efac3550f9d7baae0 263 Gene3D G3DSA:3.20.20.70 1 263 6.8E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_0174 91020ddb554b115efac3550f9d7baae0 263 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Acife_0174 91020ddb554b115efac3550f9d7baae0 263 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 35.571 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Acife_1417 cae763ef9551f93fa5cbbd68ae0130f9 514 SUPERFAMILY SSF56954 7 486 6.67E-95 T 12-10-2018 Acife_1417 cae763ef9551f93fa5cbbd68ae0130f9 514 Gene3D G3DSA:2.20.200.10 120 372 1.0E-112 T 12-10-2018 Acife_1417 cae763ef9551f93fa5cbbd68ae0130f9 514 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 17 483 3.1E-120 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Acife_1417 cae763ef9551f93fa5cbbd68ae0130f9 514 Gene3D G3DSA:1.20.1600.10 73 484 1.0E-112 T 12-10-2018 Acife_1417 cae763ef9551f93fa5cbbd68ae0130f9 514 Pfam PF02321 Outer membrane efflux protein 298 481 1.9E-29 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_1417 cae763ef9551f93fa5cbbd68ae0130f9 514 Pfam PF02321 Outer membrane efflux protein 83 272 4.2E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_2416 8e50c84c9cb7e06c7a8ab4c5f1483d8a 73 Pfam PF11127 Protein of unknown function (DUF2892) 2 60 4.3E-13 T 12-10-2018 IPR021309 Protein of unknown function DUF2892 Acife_1528 9cb82a073f1963c8e11d715d0ce2baaa 376 Gene3D G3DSA:2.40.160.180 35 375 1.6E-46 T 12-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily Acife_1528 9cb82a073f1963c8e11d715d0ce2baaa 376 Pfam PF04966 Carbohydrate-selective porin, OprB family 75 208 5.1E-11 T 12-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 Acife_1528 9cb82a073f1963c8e11d715d0ce2baaa 376 Pfam PF04966 Carbohydrate-selective porin, OprB family 253 375 8.4E-14 T 12-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 Acife_1332 3c4cea46bea188d59a637ccdeef13557 240 SUPERFAMILY SSF46785 149 223 8.33E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1332 3c4cea46bea188d59a637ccdeef13557 240 Pfam PF13545 Crp-like helix-turn-helix domain 154 217 1.7E-13 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Acife_1332 3c4cea46bea188d59a637ccdeef13557 240 SMART SM00419 164 211 1.5E-6 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Acife_1332 3c4cea46bea188d59a637ccdeef13557 240 Gene3D G3DSA:1.10.10.10 145 218 1.7E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1332 3c4cea46bea188d59a637ccdeef13557 240 SUPERFAMILY SSF51206 8 138 3.73E-7 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Acife_2463 ff4aac84036b5db4a86b1f2dc7be58ac 435 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 25 402 3.4E-35 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Acife_2463 ff4aac84036b5db4a86b1f2dc7be58ac 435 SUPERFAMILY SSF56935 27 435 2.47E-46 T 12-10-2018 Acife_2463 ff4aac84036b5db4a86b1f2dc7be58ac 435 Gene3D G3DSA:2.40.160.60 26 435 6.8E-79 T 12-10-2018 Acife_3072 4418e1777185d39ba8fe59f827601a4a 81 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 16 67 4.0E-10 T 12-10-2018 IPR031856 Putative bacterial antitoxin YdaS Acife_3072 4418e1777185d39ba8fe59f827601a4a 81 SUPERFAMILY SSF47413 13 54 1.83E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_3072 4418e1777185d39ba8fe59f827601a4a 81 Gene3D G3DSA:1.10.260.40 3 80 2.0E-10 T 12-10-2018 Acife_3010 210b49bf70a288e6224842b9c22f0728 297 Gene3D G3DSA:1.10.443.10 126 297 5.0E-41 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_3010 210b49bf70a288e6224842b9c22f0728 297 Gene3D G3DSA:1.10.150.130 6 112 3.0E-8 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_3010 210b49bf70a288e6224842b9c22f0728 297 Pfam PF00589 Phage integrase family 131 296 4.0E-27 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_3010 210b49bf70a288e6224842b9c22f0728 297 SUPERFAMILY SSF56349 123 296 2.56E-38 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_3020 ed359aaa21408cab36f2bf100d765216 138 Pfam PF04138 GtrA-like protein 12 131 1.6E-13 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 Acife_0916 baa33143d0253367fef310fa2069aa7e 719 Pfam PF03552 Cellulose synthase 252 378 5.1E-9 T 12-10-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 Acife_0916 baa33143d0253367fef310fa2069aa7e 719 Pfam PF07238 PilZ domain 496 597 4.3E-10 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Acife_0916 baa33143d0253367fef310fa2069aa7e 719 Gene3D G3DSA:3.90.550.10 76 288 1.7E-76 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0916 baa33143d0253367fef310fa2069aa7e 719 PRINTS PR01439 Cellulose synthase subunit A signature 14 34 6.1E-5 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_0916 baa33143d0253367fef310fa2069aa7e 719 PRINTS PR01439 Cellulose synthase subunit A signature 328 354 6.1E-5 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_0916 baa33143d0253367fef310fa2069aa7e 719 PRINTS PR01439 Cellulose synthase subunit A signature 468 489 6.1E-5 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_0916 baa33143d0253367fef310fa2069aa7e 719 PRINTS PR01439 Cellulose synthase subunit A signature 167 191 6.1E-5 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Acife_0916 baa33143d0253367fef310fa2069aa7e 719 SUPERFAMILY SSF53448 82 345 9.21E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0916 baa33143d0253367fef310fa2069aa7e 719 Pfam PF00535 Glycosyl transferase family 2 84 250 3.3E-28 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_2987 ed184235096750dad5ecd4205891661a 609 Pfam PF12696 TraM recognition site of TraD and TraG 388 486 1.1E-5 T 12-10-2018 IPR032689 TraD/TraG, TraM recognition site Acife_2987 ed184235096750dad5ecd4205891661a 609 SUPERFAMILY SSF52540 75 543 1.16E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2987 ed184235096750dad5ecd4205891661a 609 Gene3D G3DSA:3.40.50.300 91 239 1.3E-6 T 12-10-2018 Acife_2987 ed184235096750dad5ecd4205891661a 609 Gene3D G3DSA:3.40.50.300 317 550 1.6E-20 T 12-10-2018 Acife_2024 28473cfbf201522d7d27bf4375f4d6f3 117 Pfam PF01738 Dienelactone hydrolase family 3 99 2.3E-6 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Acife_2024 28473cfbf201522d7d27bf4375f4d6f3 117 SUPERFAMILY SSF53474 2 108 5.0E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_2024 28473cfbf201522d7d27bf4375f4d6f3 117 Gene3D G3DSA:3.40.50.1820 1 107 2.9E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_2692 0adcccbdfdb30d29e07a3a9743c27196 61 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 8.0E-16 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Acife_2692 0adcccbdfdb30d29e07a3a9743c27196 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 18.795 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2692 0adcccbdfdb30d29e07a3a9743c27196 61 Gene3D G3DSA:3.30.1390.20 1 59 2.5E-23 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Acife_2692 0adcccbdfdb30d29e07a3a9743c27196 61 SUPERFAMILY SSF55129 3 60 1.57E-18 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Acife_2692 0adcccbdfdb30d29e07a3a9743c27196 61 PIRSF PIRSF002211 1 61 3.7E-24 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_2692 0adcccbdfdb30d29e07a3a9743c27196 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 58 3.4E-21 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_1222 06c3ae20ade341a0852769fdfb60bf8e 150 Gene3D G3DSA:3.10.590.10 1 149 8.0E-57 T 12-10-2018 Acife_1222 06c3ae20ade341a0852769fdfb60bf8e 150 SUPERFAMILY SSF88697 1 149 1.57E-56 T 12-10-2018 IPR015947 PUA-like superfamily Acife_1222 06c3ae20ade341a0852769fdfb60bf8e 150 Pfam PF01878 EVE domain 2 148 1.4E-48 T 12-10-2018 IPR002740 EVE domain Acife_0169 7afe6b1cff776084a32c195ca5066511 242 Gene3D G3DSA:3.40.50.1820 23 233 4.1E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_0169 7afe6b1cff776084a32c195ca5066511 242 SUPERFAMILY SSF53474 23 221 2.53E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_0169 7afe6b1cff776084a32c195ca5066511 242 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 41 158 7.7E-5 T 12-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 Acife_1614 9cd0684871471c91c75864b346b121bf 227 Gene3D G3DSA:3.90.850.10 5 227 3.5E-78 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Acife_1614 9cd0684871471c91c75864b346b121bf 227 SUPERFAMILY SSF56529 19 226 5.1E-65 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Acife_1614 9cd0684871471c91c75864b346b121bf 227 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 25 220 1.3E-44 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Acife_0595 9294db8f9fde8869d9c7871bc39d67c6 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 2.2E-20 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Acife_0595 9294db8f9fde8869d9c7871bc39d67c6 104 SUPERFAMILY SSF54909 1 97 1.61E-27 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Acife_0595 9294db8f9fde8869d9c7871bc39d67c6 104 Gene3D G3DSA:3.30.70.100 2 103 1.9E-30 T 12-10-2018 Acife_0952 ce36b54b436c3054fb35bd71c3325e08 74 Gene3D G3DSA:3.30.920.30 4 72 9.5E-22 T 12-10-2018 IPR038570 HicA superfamily Acife_0952 ce36b54b436c3054fb35bd71c3325e08 74 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 10 65 4.9E-18 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Acife_0952 ce36b54b436c3054fb35bd71c3325e08 74 SUPERFAMILY SSF54786 4 71 2.47E-18 T 12-10-2018 Acife_0930 228d10e9e77f1706b75de65e1a7a2728 704 Pfam PF03772 Competence protein 205 473 1.8E-53 T 12-10-2018 IPR004477 ComEC/Rec2-related protein Acife_0930 228d10e9e77f1706b75de65e1a7a2728 704 Pfam PF13567 Domain of unknown function (DUF4131) 20 131 1.4E-6 T 12-10-2018 IPR025405 Domain of unknown function DUF4131 Acife_0930 228d10e9e77f1706b75de65e1a7a2728 704 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 226 401 2.7E-23 T 12-10-2018 IPR004477 ComEC/Rec2-related protein Acife_0434 c0b29dca23bb7c6c152920a4b40251bc 505 SUPERFAMILY SSF52540 1 389 3.48E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0434 c0b29dca23bb7c6c152920a4b40251bc 505 Gene3D G3DSA:3.40.50.300 1 401 8.3E-27 T 12-10-2018 Acife_0434 c0b29dca23bb7c6c152920a4b40251bc 505 Pfam PF13175 AAA ATPase domain 1 379 6.0E-68 T 12-10-2018 Acife_3015 1a24e191aeb69b9b11617c1a7fae9561 435 SUPERFAMILY SSF56176 7 177 1.07E-34 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Acife_3015 1a24e191aeb69b9b11617c1a7fae9561 435 Pfam PF01565 FAD binding domain 34 136 1.6E-18 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Acife_3015 1a24e191aeb69b9b11617c1a7fae9561 435 Gene3D G3DSA:3.30.465.40 33 189 1.3E-19 T 12-10-2018 Acife_1897 807cc66a2590ac769d8b476933bfd225 221 Pfam PF04335 VirB8 protein 12 219 6.3E-41 T 12-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 Acife_1897 807cc66a2590ac769d8b476933bfd225 221 Gene3D G3DSA:3.10.450.230 126 221 3.3E-5 T 12-10-2018 Acife_1897 807cc66a2590ac769d8b476933bfd225 221 SUPERFAMILY SSF54427 83 219 1.05E-14 T 12-10-2018 IPR032710 NTF2-like domain superfamily Acife_1184 885fe4d21251666022277c6ce5248273 157 TIGRFAM TIGR03698 clan_AA_DTGF: clan AA aspartic protease, AF_0612 family 7 110 8.9E-19 T 12-10-2018 IPR022274 Peptidase aspartic, AF0612 Acife_1184 885fe4d21251666022277c6ce5248273 157 Gene3D G3DSA:2.40.70.10 17 111 1.6E-6 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Acife_1336 a477963138a4ee6753d5753484a5497f 244 SUPERFAMILY SSF46785 152 225 1.04E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1336 a477963138a4ee6753d5753484a5497f 244 Gene3D G3DSA:1.10.10.10 148 221 4.8E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1336 a477963138a4ee6753d5753484a5497f 244 Pfam PF13545 Crp-like helix-turn-helix domain 154 220 3.2E-13 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Acife_0524 a06b7ab9d1f9bc9e0b84e2327ce8979f 261 Pfam PF14335 Domain of unknown function (DUF4391) 10 254 1.3E-78 T 12-10-2018 IPR025503 Protein of unknown function DUF4391 Acife_0118 4e14d69bcff6be66af4f2794a6a6d151 287 Gene3D G3DSA:2.60.40.2250 10 254 3.2E-94 T 12-10-2018 Acife_0118 4e14d69bcff6be66af4f2794a6a6d151 287 Gene3D G3DSA:3.10.620.30 81 246 3.2E-94 T 12-10-2018 Acife_0118 4e14d69bcff6be66af4f2794a6a6d151 287 SUPERFAMILY SSF54001 55 255 1.33E-34 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Acife_0118 4e14d69bcff6be66af4f2794a6a6d151 287 Pfam PF01841 Transglutaminase-like superfamily 126 224 6.1E-23 T 12-10-2018 IPR002931 Transglutaminase-like Acife_0118 4e14d69bcff6be66af4f2794a6a6d151 287 SMART SM00460 162 226 2.0E-15 T 12-10-2018 IPR002931 Transglutaminase-like Acife_2278 cbf9b06a84686c7bd114b41ef511e06a 70 Pfam PF10276 Zinc-finger domain 33 57 3.4E-10 T 12-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2278 cbf9b06a84686c7bd114b41ef511e06a 70 Gene3D G3DSA:2.60.260.40 2 60 6.6E-12 T 12-10-2018 Acife_0856 2915722d7eb4ac45aa2c45cc8aab9bd3 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Acife_0856 2915722d7eb4ac45aa2c45cc8aab9bd3 471 Pfam PF00120 Glutamine synthetase, catalytic domain 104 468 4.4E-137 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Acife_0856 2915722d7eb4ac45aa2c45cc8aab9bd3 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Acife_0856 2915722d7eb4ac45aa2c45cc8aab9bd3 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 2.8E-28 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Acife_0856 2915722d7eb4ac45aa2c45cc8aab9bd3 471 SUPERFAMILY SSF55931 104 470 2.06E-137 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Acife_0856 2915722d7eb4ac45aa2c45cc8aab9bd3 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 2.0E-201 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Acife_0856 2915722d7eb4ac45aa2c45cc8aab9bd3 471 SMART SM01230 104 381 1.6E-150 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Acife_0856 2915722d7eb4ac45aa2c45cc8aab9bd3 471 SUPERFAMILY SSF54368 5 102 4.19E-33 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Acife_0856 2915722d7eb4ac45aa2c45cc8aab9bd3 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Acife_0856 2915722d7eb4ac45aa2c45cc8aab9bd3 471 Gene3D G3DSA:3.30.590.10 107 459 9.8E-146 T 12-10-2018 Acife_0856 2915722d7eb4ac45aa2c45cc8aab9bd3 471 Gene3D G3DSA:3.10.20.70 4 106 1.4E-36 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Acife_2243 0cd25d6eaf2da4dab4c4b39899d340ee 170 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 11 98 3.9E-7 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Acife_2243 0cd25d6eaf2da4dab4c4b39899d340ee 170 Gene3D G3DSA:2.30.110.10 3 168 1.3E-42 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Acife_2243 0cd25d6eaf2da4dab4c4b39899d340ee 170 SUPERFAMILY SSF50475 2 157 4.15E-23 T 12-10-2018 Acife_2243 0cd25d6eaf2da4dab4c4b39899d340ee 170 PIRSF PIRSF004633 1 166 1.5E-36 T 12-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain Acife_1548 3705d094d388419062bcbf1f0b022644 81 Gene3D G3DSA:1.20.5.780 3 74 3.4E-9 T 12-10-2018 Acife_1548 3705d094d388419062bcbf1f0b022644 81 Pfam PF08681 Protein of unknown function (DUF1778) 9 67 3.2E-17 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Acife_1548 3705d094d388419062bcbf1f0b022644 81 SUPERFAMILY SSF47598 6 68 4.67E-14 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_0251 4045dd108521388fc141182b82d32329 314 SUPERFAMILY SSF103190 38 136 3.92E-17 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Acife_0251 4045dd108521388fc141182b82d32329 314 Gene3D G3DSA:3.30.450.20 5 136 1.4E-16 T 12-10-2018 Acife_1646 68d06de17e8f1b670f0b53911c431fa1 114 SUPERFAMILY SSF54292 16 107 8.49E-12 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Acife_1646 68d06de17e8f1b670f0b53911c431fa1 114 Gene3D G3DSA:3.10.20.30 1 114 1.6E-18 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_1646 68d06de17e8f1b670f0b53911c431fa1 114 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 27 104 5.8E-10 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Acife_0756 bfebf5a0679b0e0dc1440ed1b0331b0c 192 SMART SM00857 3 144 7.2E-53 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Acife_0756 bfebf5a0679b0e0dc1440ed1b0331b0c 192 Pfam PF00239 Resolvase, N terminal domain 3 143 2.8E-43 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Acife_0756 bfebf5a0679b0e0dc1440ed1b0331b0c 192 Gene3D G3DSA:3.40.50.1390 1 150 3.6E-40 T 12-10-2018 Acife_0756 bfebf5a0679b0e0dc1440ed1b0331b0c 192 SUPERFAMILY SSF53041 1 144 1.83E-38 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Acife_1726 5389ec1cf6366d1179bf516447fae44b 146 Gene3D G3DSA:3.10.180.10 2 139 4.9E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_1726 5389ec1cf6366d1179bf516447fae44b 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 129 1.2E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Acife_1726 5389ec1cf6366d1179bf516447fae44b 146 SUPERFAMILY SSF54593 4 135 1.1E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_0722 7c1b19226907f410645c93a80bfe9d0d 281 SUPERFAMILY SSF52309 181 243 6.1E-5 T 12-10-2018 Acife_0722 7c1b19226907f410645c93a80bfe9d0d 281 Gene3D G3DSA:3.40.50.450 163 276 9.4E-8 T 12-10-2018 Acife_1743 b497bc2b75fff48328824aca17281f7b 585 Gene3D G3DSA:3.10.20.310 103 190 1.7E-7 T 12-10-2018 Acife_1743 b497bc2b75fff48328824aca17281f7b 585 Gene3D G3DSA:3.10.20.310 191 267 9.8E-15 T 12-10-2018 Acife_1743 b497bc2b75fff48328824aca17281f7b 585 Gene3D G3DSA:2.40.160.50 268 585 2.1E-75 T 12-10-2018 Acife_1743 b497bc2b75fff48328824aca17281f7b 585 Pfam PF07244 Surface antigen variable number repeat 192 263 2.7E-8 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Acife_1743 b497bc2b75fff48328824aca17281f7b 585 Pfam PF01103 Surface antigen 292 583 6.9E-29 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Acife_1570 259597de55e5cc33fc355b59e7b1cc66 83 Gene3D G3DSA:2.10.260.10 2 44 1.4E-5 T 12-10-2018 Acife_1570 259597de55e5cc33fc355b59e7b1cc66 83 SMART SM00966 4 50 3.2E-4 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_1570 259597de55e5cc33fc355b59e7b1cc66 83 SUPERFAMILY SSF89447 1 41 1.92E-5 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_1469 00aa222ad804c181ad3078605f316fc5 442 Gene3D G3DSA:2.40.160.10 25 317 8.2E-14 T 12-10-2018 IPR023614 Porin domain superfamily Acife_2697 e5e5acfcf705263bdbc45218bd6414cf 61 SUPERFAMILY SSF57716 4 61 2.35E-20 T 12-10-2018 Acife_2697 e5e5acfcf705263bdbc45218bd6414cf 61 Gene3D G3DSA:4.10.830.10 1 61 9.5E-29 T 12-10-2018 Acife_2697 e5e5acfcf705263bdbc45218bd6414cf 61 Pfam PF00253 Ribosomal protein S14p/S29e 11 60 2.7E-23 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Acife_2697 e5e5acfcf705263bdbc45218bd6414cf 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 24.519 T 12-10-2018 IPR023053 Ribosomal protein S14, type Z Acife_2697 e5e5acfcf705263bdbc45218bd6414cf 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Acife_3113 fcc9e9f4abe2d7cfd63018fb52e5de51 156 SUPERFAMILY SSF55961 3 143 6.79E-21 T 12-10-2018 Acife_3113 fcc9e9f4abe2d7cfd63018fb52e5de51 156 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 4 142 3.6E-8 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase Acife_3113 fcc9e9f4abe2d7cfd63018fb52e5de51 156 Gene3D G3DSA:3.30.530.20 1 143 2.3E-25 T 12-10-2018 IPR023393 START-like domain superfamily Acife_1516 4907529cab975ab4e6d32793832c5b20 439 Gene3D G3DSA:3.30.930.10 4 322 8.2E-106 T 12-10-2018 Acife_1516 4907529cab975ab4e6d32793832c5b20 439 SUPERFAMILY SSF52954 332 399 6.54E-7 T 12-10-2018 Acife_1516 4907529cab975ab4e6d32793832c5b20 439 SUPERFAMILY SSF55681 7 315 8.96E-91 T 12-10-2018 Acife_1516 4907529cab975ab4e6d32793832c5b20 439 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 416 28.837 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Acife_1516 4907529cab975ab4e6d32793832c5b20 439 PIRSF PIRSF001549 4 411 2.5E-102 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Acife_1516 4907529cab975ab4e6d32793832c5b20 439 Gene3D G3DSA:3.40.50.800 328 404 1.9E-8 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily Acife_1516 4907529cab975ab4e6d32793832c5b20 439 Pfam PF13393 Histidyl-tRNA synthetase 11 311 3.0E-44 T 12-10-2018 Acife_1516 4907529cab975ab4e6d32793832c5b20 439 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 396 1.1E-133 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Acife_0863 0a0c76277c0ecaf609d26c6c1df13dac 124 SUPERFAMILY SSF64076 1 122 7.98E-31 T 12-10-2018 IPR036748 MTH938-like superfamily Acife_0863 0a0c76277c0ecaf609d26c6c1df13dac 124 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 120 6.3E-27 T 12-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein Acife_0863 0a0c76277c0ecaf609d26c6c1df13dac 124 Gene3D G3DSA:3.40.1230.10 1 124 2.9E-37 T 12-10-2018 IPR036748 MTH938-like superfamily Acife_2016 e0c505255e5484dcf64ae8ecf0a54973 149 Gene3D G3DSA:1.25.40.10 24 141 9.3E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0258 e4badbd8eb179d4a0446727e6e3f3720 321 Gene3D G3DSA:1.25.40.10 84 154 1.4E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0258 e4badbd8eb179d4a0446727e6e3f3720 321 SUPERFAMILY SSF48452 88 249 1.64E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_3194 06a4f99e6be83e7775b711a76ddc125b 159 Gene3D G3DSA:1.20.5.620 65 125 2.4E-15 T 12-10-2018 Acife_3194 06a4f99e6be83e7775b711a76ddc125b 159 SUPERFAMILY SSF81573 66 124 3.01E-13 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Acife_3194 06a4f99e6be83e7775b711a76ddc125b 159 Pfam PF00430 ATP synthase B/B' CF(0) 9 139 1.5E-40 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Acife_3194 06a4f99e6be83e7775b711a76ddc125b 159 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 13 159 6.1E-57 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Acife_3194 06a4f99e6be83e7775b711a76ddc125b 159 Hamap MF_01398 ATP synthase subunit b [atpF]. 5 141 12.817 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Acife_2209 62e11da850c9298fae8acf34b893f90c 249 Gene3D G3DSA:3.60.15.10 1 237 1.8E-72 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_2209 62e11da850c9298fae8acf34b893f90c 249 Pfam PF00753 Metallo-beta-lactamase superfamily 12 175 4.8E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_2209 62e11da850c9298fae8acf34b893f90c 249 SUPERFAMILY SSF56281 1 229 5.46E-48 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_2209 62e11da850c9298fae8acf34b893f90c 249 SMART SM00849 12 175 9.9E-22 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_0597 009f93f01afd26a2cac41817ccf14f5f 188 SUPERFAMILY SSF51283 3 187 1.11E-51 T 12-10-2018 IPR036157 dUTPase-like superfamily Acife_0597 009f93f01afd26a2cac41817ccf14f5f 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 187 1.9E-48 T 12-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Acife_0597 009f93f01afd26a2cac41817ccf14f5f 188 Gene3D G3DSA:2.70.40.10 1 159 3.7E-52 T 12-10-2018 IPR036157 dUTPase-like superfamily Acife_0597 009f93f01afd26a2cac41817ccf14f5f 188 Pfam PF00692 dUTPase 81 183 2.1E-6 T 12-10-2018 IPR029054 dUTPase-like Acife_0597 009f93f01afd26a2cac41817ccf14f5f 188 Hamap MF_00146 dCTP deaminase [dcd]. 1 188 28.436 T 12-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Acife_0101 8bb69170d4f1225c47cc0c1933054959 273 Gene3D G3DSA:1.10.10.10 165 269 4.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0101 8bb69170d4f1225c47cc0c1933054959 273 SUPERFAMILY SSF46894 171 269 9.07E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Acife_0101 8bb69170d4f1225c47cc0c1933054959 273 Pfam PF00486 Transcriptional regulatory protein, C terminal 191 267 5.0E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_0101 8bb69170d4f1225c47cc0c1933054959 273 SMART SM00862 191 267 5.0E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Acife_1305 efdbf0937f51d5c0e2dd4b81ede3d484 178 Gene3D G3DSA:3.30.910.20 16 177 5.0E-30 T 12-10-2018 IPR024930 Skp domain superfamily Acife_1305 efdbf0937f51d5c0e2dd4b81ede3d484 178 SMART SM00935 10 166 4.8E-35 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Acife_1305 efdbf0937f51d5c0e2dd4b81ede3d484 178 Pfam PF03938 Outer membrane protein (OmpH-like) 10 165 3.3E-31 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Acife_1305 efdbf0937f51d5c0e2dd4b81ede3d484 178 SUPERFAMILY SSF111384 24 165 1.44E-27 T 12-10-2018 Acife_0685 588c7a5eca79e2872edbf50301ebaac2 558 Gene3D G3DSA:3.40.50.300 1 259 2.0E-46 T 12-10-2018 Acife_0685 588c7a5eca79e2872edbf50301ebaac2 558 Gene3D G3DSA:3.40.50.300 260 555 1.7E-50 T 12-10-2018 Acife_0685 588c7a5eca79e2872edbf50301ebaac2 558 SUPERFAMILY SSF52540 2 509 4.97E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0685 588c7a5eca79e2872edbf50301ebaac2 558 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 6.9E-159 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Acife_0685 588c7a5eca79e2872edbf50301ebaac2 558 PIRSF PIRSF003128 1 558 1.1E-155 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Acife_0685 588c7a5eca79e2872edbf50301ebaac2 558 SUPERFAMILY SSF52540 1 217 9.11E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0685 588c7a5eca79e2872edbf50301ebaac2 558 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 510 5.7E-17 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Acife_0851 4c9fc3071e23ac6c3236b391704d3d3e 242 SUPERFAMILY SSF55166 13 233 1.88E-47 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Acife_0851 4c9fc3071e23ac6c3236b391704d3d3e 242 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 12 234 26.055 T 12-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 Acife_0851 4c9fc3071e23ac6c3236b391704d3d3e 242 PIRSF PIRSF026671 2 240 5.7E-45 T 12-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 Acife_0851 4c9fc3071e23ac6c3236b391704d3d3e 242 Gene3D G3DSA:3.30.1380.10 32 230 8.3E-41 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Acife_0851 4c9fc3071e23ac6c3236b391704d3d3e 242 Pfam PF01427 D-ala-D-ala dipeptidase 30 234 8.5E-35 T 12-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 Acife_1514 0175f94b9dd6e1c86fc51559b43459df 326 Pfam PF13413 Helix-turn-helix domain 13 73 3.0E-22 T 12-10-2018 Acife_1514 0175f94b9dd6e1c86fc51559b43459df 326 SMART SM00530 12 73 0.0013 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_1514 0175f94b9dd6e1c86fc51559b43459df 326 Pfam PF13464 Domain of unknown function (DUF4115) 199 271 4.0E-18 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 Acife_1514 0175f94b9dd6e1c86fc51559b43459df 326 SUPERFAMILY SSF47413 7 75 7.6E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_1514 0175f94b9dd6e1c86fc51559b43459df 326 Gene3D G3DSA:1.10.260.40 5 91 3.7E-24 T 12-10-2018 Acife_1007 ca29fee9f82877e170a4d3ade10288d0 261 SUPERFAMILY SSF47413 20 82 5.63E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_1007 ca29fee9f82877e170a4d3ade10288d0 261 Gene3D G3DSA:3.30.450.180 105 261 8.5E-15 T 12-10-2018 Acife_1007 ca29fee9f82877e170a4d3ade10288d0 261 Gene3D G3DSA:1.10.260.40 14 84 1.2E-8 T 12-10-2018 Acife_1007 ca29fee9f82877e170a4d3ade10288d0 261 Pfam PF13560 Helix-turn-helix domain 8 86 8.0E-16 T 12-10-2018 Acife_1007 ca29fee9f82877e170a4d3ade10288d0 261 SMART SM00530 27 83 2.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_2392 db4b8396bb58f88cd6f88172f964bb5e 385 Pfam PF06969 HemN C-terminal domain 313 373 4.6E-14 T 12-10-2018 IPR010723 HemN, C-terminal Acife_2392 db4b8396bb58f88cd6f88172f964bb5e 385 Gene3D G3DSA:3.80.30.20 2 304 1.8E-92 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Acife_2392 db4b8396bb58f88cd6f88172f964bb5e 385 Pfam PF04055 Radical SAM superfamily 15 176 1.4E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_2392 db4b8396bb58f88cd6f88172f964bb5e 385 SMART SM00729 10 227 4.0E-44 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Acife_2392 db4b8396bb58f88cd6f88172f964bb5e 385 SUPERFAMILY SSF102114 8 384 8.89E-104 T 12-10-2018 Acife_2392 db4b8396bb58f88cd6f88172f964bb5e 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 12 355 3.6E-102 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Acife_3232 fa97aa98d631c6da793b0fbe880258ef 343 Pfam PF03567 Sulfotransferase family 24 253 5.0E-18 T 12-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 Acife_1621 d818043ab4eea2831456bcb227f91f16 280 SUPERFAMILY SSF52402 1 248 6.28E-74 T 12-10-2018 Acife_1621 d818043ab4eea2831456bcb227f91f16 280 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 162 182 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Acife_1621 d818043ab4eea2831456bcb227f91f16 280 SMART SM00893 22 218 1.5E-59 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Acife_1621 d818043ab4eea2831456bcb227f91f16 280 Gene3D G3DSA:3.40.50.620 1 268 6.4E-89 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_1621 d818043ab4eea2831456bcb227f91f16 280 PIRSF PIRSF000090 1 269 1.9E-89 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Acife_1621 d818043ab4eea2831456bcb227f91f16 280 Pfam PF01012 Electron transfer flavoprotein domain 23 193 3.4E-48 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Acife_2620 d51097f5693522d8e376703b097d4521 530 Pfam PF13007 Transposase C of IS166 homeodomain 78 133 3.0E-7 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain Acife_2620 d51097f5693522d8e376703b097d4521 530 Pfam PF03050 Transposase IS66 family 223 507 2.1E-77 T 12-10-2018 IPR004291 Transposase, IS66 Acife_0107 e1a235701f1d7480391cbaee384de0b9 192 Pfam PF01292 Prokaryotic cytochrome b561 8 190 1.5E-12 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Acife_0107 e1a235701f1d7480391cbaee384de0b9 192 SUPERFAMILY SSF81342 5 190 2.28E-8 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Acife_2751 2c53438a6786723960992d20db62122f 163 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 133 4.5E-28 T 12-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Acife_2751 2c53438a6786723960992d20db62122f 163 SUPERFAMILY SSF55961 1 142 1.15E-32 T 12-10-2018 Acife_2751 2c53438a6786723960992d20db62122f 163 Gene3D G3DSA:3.30.530.20 1 143 2.8E-39 T 12-10-2018 IPR023393 START-like domain superfamily Acife_0247 7583681abf36123b8f4c203922899081 434 SUPERFAMILY SSF53300 260 384 5.26E-6 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Acife_0247 7583681abf36123b8f4c203922899081 434 Pfam PF04285 Protein of unknown function (DUF444) 4 428 2.5E-139 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 Acife_1730 e6ffe0f0d28ce5e306c07c076adbdbae 191 Pfam PF13515 Fusaric acid resistance protein-like 64 175 4.1E-10 T 12-10-2018 Acife_2619 6898611ac11bc91916c1f2729975ada7 132 Pfam PF05717 IS66 Orf2 like protein 25 121 6.4E-34 T 12-10-2018 IPR008878 Transposase IS66, Orf2 Acife_2869 5114b3e009f374d7dd203a43898b1dda 94 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 4 66 1.2E-8 T 12-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 Acife_2873 07437e4173845693abbfc2fcb97b0959 307 Gene3D G3DSA:2.30.30.60 132 182 8.6E-13 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Acife_2873 07437e4173845693abbfc2fcb97b0959 307 SUPERFAMILY SSF50182 115 183 1.08E-15 T 12-10-2018 IPR010920 LSM domain superfamily Acife_2873 07437e4173845693abbfc2fcb97b0959 307 Pfam PF00924 Mechanosensitive ion channel 74 278 2.2E-45 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Acife_2873 07437e4173845693abbfc2fcb97b0959 307 SUPERFAMILY SSF82689 186 287 4.05E-17 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Acife_2873 07437e4173845693abbfc2fcb97b0959 307 Gene3D G3DSA:3.30.70.100 185 282 1.2E-12 T 12-10-2018 Acife_2873 07437e4173845693abbfc2fcb97b0959 307 SUPERFAMILY SSF82861 34 114 3.79E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Acife_2174 82bf88025f1e16519b42b2b2e78c7935 123 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 85 4.3E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Acife_2174 82bf88025f1e16519b42b2b2e78c7935 123 Gene3D G3DSA:1.10.10.10 2 122 1.7E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2174 82bf88025f1e16519b42b2b2e78c7935 123 SUPERFAMILY SSF46785 5 103 5.78E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2793 b41d7f67fe57df8d93a349d5d8c13b03 348 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 307 1.5E-88 T 12-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 Acife_2793 b41d7f67fe57df8d93a349d5d8c13b03 348 SUPERFAMILY SSF53756 1 347 1.82E-71 T 12-10-2018 Acife_2793 b41d7f67fe57df8d93a349d5d8c13b03 348 Gene3D G3DSA:3.40.50.2000 1 160 9.7E-51 T 12-10-2018 Acife_2793 b41d7f67fe57df8d93a349d5d8c13b03 348 Gene3D G3DSA:3.40.50.2000 178 314 1.2E-33 T 12-10-2018 Acife_2793 b41d7f67fe57df8d93a349d5d8c13b03 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 321 7.5E-52 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Acife_0324 1f98ee9a10a373ce26d20cdd8b22243b 709 Pfam PF13520 Amino acid permease 45 460 3.1E-22 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Acife_0324 1f98ee9a10a373ce26d20cdd8b22243b 709 Gene3D G3DSA:1.20.1740.10 39 487 2.6E-19 T 12-10-2018 Acife_2070 709cf2ded680d31e794aa1ab2374528c 148 SUPERFAMILY SSF51230 9 125 2.09E-27 T 12-10-2018 IPR011053 Single hybrid motif Acife_2070 709cf2ded680d31e794aa1ab2374528c 148 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 10 137 28.448 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Acife_2070 709cf2ded680d31e794aa1ab2374528c 148 Gene3D G3DSA:2.40.50.100 7 132 8.5E-32 T 12-10-2018 Acife_2070 709cf2ded680d31e794aa1ab2374528c 148 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 54 83 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Acife_2070 709cf2ded680d31e794aa1ab2374528c 148 Pfam PF01597 Glycine cleavage H-protein 14 123 2.5E-31 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Acife_1444 845f4d9f6a1d6b6ff16430b001b56bc1 82 Pfam PF00550 Phosphopantetheine attachment site 6 73 5.8E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain Acife_1444 845f4d9f6a1d6b6ff16430b001b56bc1 82 Gene3D G3DSA:1.10.1200.10 1 81 3.7E-31 T 12-10-2018 IPR036736 ACP-like superfamily Acife_1444 845f4d9f6a1d6b6ff16430b001b56bc1 82 SUPERFAMILY SSF47336 2 80 5.89E-24 T 12-10-2018 IPR036736 ACP-like superfamily Acife_1444 845f4d9f6a1d6b6ff16430b001b56bc1 82 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.862 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Acife_1444 845f4d9f6a1d6b6ff16430b001b56bc1 82 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 76 0.005 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Acife_1444 845f4d9f6a1d6b6ff16430b001b56bc1 82 SMART SM00823 Phosphopantetheine attachment site 5 77 0.0055 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Acife_1444 845f4d9f6a1d6b6ff16430b001b56bc1 82 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 3.8E-36 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Acife_1444 845f4d9f6a1d6b6ff16430b001b56bc1 82 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site Acife_2295 055b631cac11276ded295e565385a2ba 369 SUPERFAMILY SSF50129 318 369 2.31E-13 T 12-10-2018 IPR011032 GroES-like superfamily Acife_2295 055b631cac11276ded295e565385a2ba 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Acife_2295 055b631cac11276ded295e565385a2ba 369 SUPERFAMILY SSF51735 160 334 2.18E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2295 055b631cac11276ded295e565385a2ba 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 369 9.7E-195 T 12-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 Acife_2295 055b631cac11276ded295e565385a2ba 369 Gene3D G3DSA:3.40.50.720 174 312 3.9E-151 T 12-10-2018 Acife_2295 055b631cac11276ded295e565385a2ba 369 Gene3D G3DSA:3.90.180.10 6 364 3.9E-151 T 12-10-2018 Acife_2295 055b631cac11276ded295e565385a2ba 369 SMART SM00829 10 367 1.6E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Acife_2295 055b631cac11276ded295e565385a2ba 369 SUPERFAMILY SSF50129 1 184 2.89E-71 T 12-10-2018 IPR011032 GroES-like superfamily Acife_2295 055b631cac11276ded295e565385a2ba 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 153 1.0E-25 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Acife_2295 055b631cac11276ded295e565385a2ba 369 Pfam PF00107 Zinc-binding dehydrogenase 197 320 5.5E-24 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 SUPERFAMILY SSF53067 155 335 3.29E-46 T 12-10-2018 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 340 3.3E-158 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 Gene3D G3DSA:3.30.420.40 14 332 4.0E-129 T 12-10-2018 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 Gene3D G3DSA:3.90.640.10 191 264 4.0E-129 T 12-10-2018 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 1.7E-62 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 1.7E-62 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 1.7E-62 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 1.7E-62 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 1.7E-62 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 SUPERFAMILY SSF53067 10 153 7.33E-39 T 12-10-2018 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 Pfam PF06723 MreB/Mbl protein 12 339 5.9E-148 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Acife_2495 b5781bd3c8a37ad17325b52c52f30144 347 Gene3D G3DSA:3.30.420.40 159 322 4.0E-129 T 12-10-2018 Acife_1458 faf6a81d316020258f13a9641ea75a44 181 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 12 163 1.2E-31 T 12-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 Acife_1458 faf6a81d316020258f13a9641ea75a44 181 Pfam PF02613 Nitrate reductase delta subunit 19 129 3.3E-6 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Acife_1458 faf6a81d316020258f13a9641ea75a44 181 SUPERFAMILY SSF89155 6 164 9.55E-25 T 12-10-2018 IPR036411 TorD-like superfamily Acife_0085 a328ebefe00814ced84a62f14ef72c50 67 PIRSF PIRSF002599 1 67 4.1E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 Acife_0085 a328ebefe00814ced84a62f14ef72c50 67 PRINTS PR00050 Cold shock protein signature 40 58 3.9E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_0085 a328ebefe00814ced84a62f14ef72c50 67 PRINTS PR00050 Cold shock protein signature 25 34 3.9E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_0085 a328ebefe00814ced84a62f14ef72c50 67 PRINTS PR00050 Cold shock protein signature 4 19 3.9E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_0085 a328ebefe00814ced84a62f14ef72c50 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.2E-29 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Acife_0085 a328ebefe00814ced84a62f14ef72c50 67 SUPERFAMILY SSF50249 1 65 1.5E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_0085 a328ebefe00814ced84a62f14ef72c50 67 SMART SM00357 3 67 3.8E-28 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Acife_0085 a328ebefe00814ced84a62f14ef72c50 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 12-10-2018 IPR019844 Cold-shock conserved site Acife_0085 a328ebefe00814ced84a62f14ef72c50 67 Gene3D G3DSA:2.40.50.140 1 67 7.5E-30 T 12-10-2018 Acife_0974 d4e6b0edc0c92496ffa35cd0bfecdcc9 335 Gene3D G3DSA:1.20.58.1130 7 227 9.1E-35 T 12-10-2018 Acife_0974 d4e6b0edc0c92496ffa35cd0bfecdcc9 335 Pfam PF01699 Sodium/calcium exchanger protein 197 284 8.3E-10 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Acife_0974 d4e6b0edc0c92496ffa35cd0bfecdcc9 335 Pfam PF01699 Sodium/calcium exchanger protein 4 161 1.3E-16 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Acife_0974 d4e6b0edc0c92496ffa35cd0bfecdcc9 335 Gene3D G3DSA:1.20.1420.30 33 286 9.1E-35 T 12-10-2018 Acife_2744 b99da29f895f32b5260c077b6ba487a6 516 Pfam PF00916 Sulfate permease family 13 399 7.7E-51 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Acife_3220 2485fd03e7937d90726f5ad1ed513a10 89 Pfam PF08681 Protein of unknown function (DUF1778) 6 81 6.8E-18 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Acife_3220 2485fd03e7937d90726f5ad1ed513a10 89 Gene3D G3DSA:1.20.5.780 1 86 7.6E-20 T 12-10-2018 Acife_3220 2485fd03e7937d90726f5ad1ed513a10 89 SUPERFAMILY SSF47598 5 80 1.45E-16 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 Gene3D G3DSA:1.10.3370.10 10 431 4.1E-165 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 ProSitePatterns PS00755 Protein secY signature 1. 77 96 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 Pfam PF00344 SecY translocase 77 419 4.6E-118 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 24 42 5.1E-92 T 12-10-2018 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 5.1E-92 T 12-10-2018 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 5.1E-92 T 12-10-2018 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 5.1E-92 T 12-10-2018 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 372 390 5.1E-92 T 12-10-2018 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 117 140 5.1E-92 T 12-10-2018 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 317 339 5.1E-92 T 12-10-2018 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 404 422 5.1E-92 T 12-10-2018 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 76 96 5.1E-92 T 12-10-2018 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 11 435 30.12 T 12-10-2018 IPR026593 Protein translocase subunit SecY Acife_2690 0f914c08002abdda62799aec1c613ac8 443 SUPERFAMILY SSF103491 13 426 3.53E-128 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 430 1.3E-129 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Acife_2690 0f914c08002abdda62799aec1c613ac8 443 PIRSF PIRSF004557 8 442 1.3E-122 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Acife_1468 9003c1f390abf9938dc9fc886bc9fd7f 68 SUPERFAMILY SSF50331 1 66 5.1E-16 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Acife_1468 9003c1f390abf9938dc9fc886bc9fd7f 68 Gene3D G3DSA:2.40.50.100 1 65 3.0E-19 T 12-10-2018 Acife_1468 9003c1f390abf9938dc9fc886bc9fd7f 68 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 66 3.4E-17 T 12-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 Acife_1468 9003c1f390abf9938dc9fc886bc9fd7f 68 Pfam PF03459 TOBE domain 3 63 2.6E-10 T 12-10-2018 IPR005116 Transport-associated OB, type 1 Acife_1108 5920672b90654fd4721a52525f02efd3 80 SUPERFAMILY SSF143120 1 40 1.28E-7 T 12-10-2018 IPR036165 YefM-like superfamily Acife_1108 5920672b90654fd4721a52525f02efd3 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 35 1.5E-6 T 12-10-2018 Acife_1108 5920672b90654fd4721a52525f02efd3 80 Gene3D G3DSA:3.40.1620.10 1 38 3.3E-8 T 12-10-2018 Acife_1108 5920672b90654fd4721a52525f02efd3 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 61 5.6E-9 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Acife_0895 6e1b294a3602ae104b1a8a5d17e9407d 478 Gene3D G3DSA:2.40.30.170 257 336 1.7E-50 T 12-10-2018 Acife_0895 6e1b294a3602ae104b1a8a5d17e9407d 478 Gene3D G3DSA:2.40.30.170 121 134 2.0E-13 T 12-10-2018 Acife_0895 6e1b294a3602ae104b1a8a5d17e9407d 478 Gene3D G3DSA:2.40.50.100 135 169 2.0E-13 T 12-10-2018 Acife_0895 6e1b294a3602ae104b1a8a5d17e9407d 478 Gene3D G3DSA:2.40.50.100 215 256 1.7E-50 T 12-10-2018 Acife_0895 6e1b294a3602ae104b1a8a5d17e9407d 478 Gene3D G3DSA:1.10.287.470 194 214 1.7E-50 T 12-10-2018 Acife_0895 6e1b294a3602ae104b1a8a5d17e9407d 478 Gene3D G3DSA:1.10.287.470 170 185 2.0E-13 T 12-10-2018 Acife_0895 6e1b294a3602ae104b1a8a5d17e9407d 478 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 118 330 1.0E-78 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_0895 6e1b294a3602ae104b1a8a5d17e9407d 478 SUPERFAMILY SSF111369 133 334 7.98E-21 T 12-10-2018 Acife_0895 6e1b294a3602ae104b1a8a5d17e9407d 478 Gene3D G3DSA:2.40.420.20 110 120 2.0E-13 T 12-10-2018 Acife_0895 6e1b294a3602ae104b1a8a5d17e9407d 478 Gene3D G3DSA:2.40.420.20 337 395 1.7E-50 T 12-10-2018 Acife_0895 6e1b294a3602ae104b1a8a5d17e9407d 478 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 213 400 9.2E-36 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Acife_2840 751e9aa06220560a469639b67c444df7 259 SUPERFAMILY SSF69593 14 244 1.01E-23 T 12-10-2018 Acife_2840 751e9aa06220560a469639b67c444df7 259 SMART SM00563 87 195 1.0E-19 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Acife_2840 751e9aa06220560a469639b67c444df7 259 Pfam PF01553 Acyltransferase 74 192 1.7E-13 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Acife_1896 112b6a6f817f589d68b133a4dc9b9767 392 Pfam PF03524 Conjugal transfer protein 155 387 1.1E-33 T 12-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Acife_2337 7eb7ef1847e654edcb47d42271d295f4 349 Gene3D G3DSA:3.40.50.720 161 316 5.4E-129 T 12-10-2018 Acife_2337 7eb7ef1847e654edcb47d42271d295f4 349 SMART SM00829 11 344 0.0027 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Acife_2337 7eb7ef1847e654edcb47d42271d295f4 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 180 208 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Acife_2337 7eb7ef1847e654edcb47d42271d295f4 349 SUPERFAMILY SSF51735 151 314 6.74E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2337 7eb7ef1847e654edcb47d42271d295f4 349 SUPERFAMILY SSF50129 8 174 7.91E-46 T 12-10-2018 IPR011032 GroES-like superfamily Acife_2337 7eb7ef1847e654edcb47d42271d295f4 349 Gene3D G3DSA:3.90.180.10 16 344 5.4E-129 T 12-10-2018 Acife_2337 7eb7ef1847e654edcb47d42271d295f4 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 144 9.9E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Acife_2337 7eb7ef1847e654edcb47d42271d295f4 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Acife_2337 7eb7ef1847e654edcb47d42271d295f4 349 Pfam PF00107 Zinc-binding dehydrogenase 187 310 9.0E-23 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Acife_2139 37b6a36c9e09eafa3dd414703cdbacc4 338 Gene3D G3DSA:2.40.50.100 62 192 2.3E-34 T 12-10-2018 Acife_2139 37b6a36c9e09eafa3dd414703cdbacc4 338 Gene3D G3DSA:2.40.30.170 47 263 2.3E-34 T 12-10-2018 Acife_2139 37b6a36c9e09eafa3dd414703cdbacc4 338 SUPERFAMILY SSF111369 55 226 4.84E-14 T 12-10-2018 Acife_2139 37b6a36c9e09eafa3dd414703cdbacc4 338 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 336 1.7E-35 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Acife_2139 37b6a36c9e09eafa3dd414703cdbacc4 338 Gene3D G3DSA:1.10.287.470 95 153 2.3E-34 T 12-10-2018 Acife_2139 37b6a36c9e09eafa3dd414703cdbacc4 338 Gene3D G3DSA:2.40.420.20 40 333 2.3E-34 T 12-10-2018 Acife_1669 db2e127947a9b8e4c9d2807c0a1084b4 275 Pfam PF13289 SIR2-like domain 102 257 3.6E-24 T 12-10-2018 IPR039444 SIR2-like domain Acife_2145 86a546131805a11b8f40775440a79840 427 SUPERFAMILY SSF56954 17 420 2.88E-66 T 12-10-2018 Acife_2145 86a546131805a11b8f40775440a79840 427 Gene3D G3DSA:1.20.1600.10 28 424 2.5E-60 T 12-10-2018 Acife_2145 86a546131805a11b8f40775440a79840 427 Pfam PF02321 Outer membrane efflux protein 246 420 2.4E-28 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_2145 86a546131805a11b8f40775440a79840 427 Pfam PF02321 Outer membrane efflux protein 40 221 1.7E-10 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_1266 689c2a7401527a6d8d081317683640a6 400 Pfam PF01757 Acyltransferase family 9 365 3.8E-25 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Acife_0448 91c513ef896b431a34e96082310c3d71 181 Pfam PF03481 Putative GTP-binding controlling metal-binding 125 171 2.1E-7 T 12-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain Acife_0448 91c513ef896b431a34e96082310c3d71 181 Gene3D G3DSA:3.20.20.140 1 111 5.9E-21 T 12-10-2018 Acife_0448 91c513ef896b431a34e96082310c3d71 181 SUPERFAMILY SSF51556 1 99 2.62E-32 T 12-10-2018 IPR032466 Metal-dependent hydrolase Acife_0448 91c513ef896b431a34e96082310c3d71 181 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Acife_0767 ff5a3179ff151cf6e66c6c00b20cb498 237 Pfam PF09836 Putative DNA-binding domain 7 97 1.6E-13 T 12-10-2018 IPR018640 Putative DNA-binding domain, bacteria Acife_0840 fe1de4563f9768000928e38343b779ec 65 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 52 5.4E-16 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Acife_0840 fe1de4563f9768000928e38343b779ec 65 SUPERFAMILY SSF46955 5 52 1.3E-8 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Acife_0840 fe1de4563f9768000928e38343b779ec 65 Gene3D G3DSA:1.10.1660.10 1 55 1.9E-10 T 12-10-2018 Acife_0840 fe1de4563f9768000928e38343b779ec 65 Pfam PF12728 Helix-turn-helix domain 5 53 9.8E-15 T 12-10-2018 Acife_2218 6b328c0a06db659522a927b20b6a7b4a 446 Gene3D G3DSA:1.10.3110.10 97 197 1.8E-133 T 12-10-2018 Acife_2218 6b328c0a06db659522a927b20b6a7b4a 446 SUPERFAMILY SSF54373 287 394 2.35E-25 T 12-10-2018 Acife_2218 6b328c0a06db659522a927b20b6a7b4a 446 Gene3D G3DSA:3.50.50.60 4 436 1.8E-133 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2218 6b328c0a06db659522a927b20b6a7b4a 446 Gene3D G3DSA:3.90.660.20 39 394 1.8E-133 T 12-10-2018 Acife_2218 6b328c0a06db659522a927b20b6a7b4a 446 Pfam PF01593 Flavin containing amine oxidoreductase 11 442 3.4E-50 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Acife_2218 6b328c0a06db659522a927b20b6a7b4a 446 SUPERFAMILY SSF51905 3 438 2.14E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2218 6b328c0a06db659522a927b20b6a7b4a 446 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 1 442 4.0E-83 T 12-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Acife_1295 7b10736a9325100e2018a55cfb7f3c8a 199 Pfam PF09335 SNARE associated Golgi protein 39 160 2.9E-16 T 12-10-2018 IPR032816 SNARE associated Golgi protein Acife_2098 b381c884375a619892628cbb3203c0a7 51 Pfam PF11752 Protein of unknown function (DUF3309) 3 51 7.5E-22 T 12-10-2018 IPR021738 Protein of unknown function DUF3309 Acife_2008 1fb2710ad539e6e98cbfff1d28dca5ca 320 SUPERFAMILY SSF52540 5 298 1.15E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_2008 1fb2710ad539e6e98cbfff1d28dca5ca 320 Pfam PF00685 Sulfotransferase domain 9 211 7.7E-13 T 12-10-2018 IPR000863 Sulfotransferase domain GO:0008146 Acife_2627 f1a139cc2528d59db254644bc6aa0aaa 246 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 26 199 3.0E-43 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Acife_2627 f1a139cc2528d59db254644bc6aa0aaa 246 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 30 224 2.8E-77 T 12-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 Acife_2627 f1a139cc2528d59db254644bc6aa0aaa 246 PIRSF PIRSF000857 6 231 9.9E-77 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Acife_2627 f1a139cc2528d59db254644bc6aa0aaa 246 SUPERFAMILY SSF52402 16 187 2.85E-45 T 12-10-2018 Acife_2627 f1a139cc2528d59db254644bc6aa0aaa 246 Gene3D G3DSA:3.40.50.620 4 235 2.9E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2627 f1a139cc2528d59db254644bc6aa0aaa 246 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 27 225 1.6E-52 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Acife_0496 7dc11bd19c86c6d7d6116c70df5e1209 396 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 66 396 7.5E-67 T 12-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 Acife_0496 7dc11bd19c86c6d7d6116c70df5e1209 396 SUPERFAMILY SSF56935 127 380 2.49E-9 T 12-10-2018 Acife_1722 d8be26649cabc6ea1bca8edee3b644bd 136 SUPERFAMILY SSF88723 6 134 2.35E-31 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_1722 d8be26649cabc6ea1bca8edee3b644bd 136 Pfam PF01850 PIN domain 7 119 9.6E-14 T 12-10-2018 IPR002716 PIN domain Acife_1722 d8be26649cabc6ea1bca8edee3b644bd 136 Gene3D G3DSA:3.40.50.1010 2 134 1.1E-32 T 12-10-2018 Acife_1722 d8be26649cabc6ea1bca8edee3b644bd 136 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 7 133 9.524 T 12-10-2018 IPR022907 VapC family GO:0004540 Acife_3209 ff6337015a94c5d4ed1594e257376dd6 189 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 79 167 4.1E-19 T 12-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 Acife_3209 ff6337015a94c5d4ed1594e257376dd6 189 Gene3D G3DSA:1.20.120.1630 2 189 5.0E-37 T 12-10-2018 Acife_2226 48d0c304320007c51dbe71044b21eeba 289 Pfam PF03755 YicC-like family, N-terminal region 2 155 3.9E-36 T 12-10-2018 IPR013527 YicC-like, N-terminal Acife_2226 48d0c304320007c51dbe71044b21eeba 289 Pfam PF08340 Domain of unknown function (DUF1732) 205 289 1.9E-33 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 Acife_2226 48d0c304320007c51dbe71044b21eeba 289 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 289 4.0E-83 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Acife_0065 2e62b21fa8cda383598ba79e5657f06d 95 Pfam PF12674 Putative zinc ribbon domain 22 93 3.5E-13 T 12-10-2018 IPR025868 Putative zinc ribbon domain Acife_1996 0817fbb0451d7bc537312c7b4fc0bb1e 481 SUPERFAMILY SSF52540 244 468 4.72E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1996 0817fbb0451d7bc537312c7b4fc0bb1e 481 Pfam PF00271 Helicase conserved C-terminal domain 322 425 5.2E-10 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1996 0817fbb0451d7bc537312c7b4fc0bb1e 481 SMART SM00490 344 425 1.9E-10 T 12-10-2018 IPR001650 Helicase, C-terminal Acife_1996 0817fbb0451d7bc537312c7b4fc0bb1e 481 Pfam PF00176 SNF2 family N-terminal domain 37 278 9.7E-17 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Acife_1996 0817fbb0451d7bc537312c7b4fc0bb1e 481 SMART SM00487 17 201 0.0015 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Acife_1996 0817fbb0451d7bc537312c7b4fc0bb1e 481 Gene3D G3DSA:3.40.50.10810 23 230 1.2E-20 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Acife_1996 0817fbb0451d7bc537312c7b4fc0bb1e 481 SUPERFAMILY SSF52540 14 243 6.56E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1996 0817fbb0451d7bc537312c7b4fc0bb1e 481 Gene3D G3DSA:3.40.50.300 247 479 4.5E-28 T 12-10-2018 Acife_1328 356c1070929262f50aecfc9abb92fbc1 569 Gene3D G3DSA:3.30.70.270 126 306 9.2E-65 T 12-10-2018 Acife_1328 356c1070929262f50aecfc9abb92fbc1 569 Pfam PF00563 EAL domain 309 544 2.0E-73 T 12-10-2018 IPR001633 EAL domain Acife_1328 356c1070929262f50aecfc9abb92fbc1 569 SMART SM00052 303 549 1.4E-114 T 12-10-2018 IPR001633 EAL domain Acife_1328 356c1070929262f50aecfc9abb92fbc1 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 130 291 5.9E-48 T 12-10-2018 IPR000160 GGDEF domain Acife_1328 356c1070929262f50aecfc9abb92fbc1 569 SUPERFAMILY SSF55073 137 295 8.44E-55 T 12-10-2018 IPR029787 Nucleotide cyclase Acife_1328 356c1070929262f50aecfc9abb92fbc1 569 SMART SM00267 121 293 6.9E-72 T 12-10-2018 IPR000160 GGDEF domain Acife_1328 356c1070929262f50aecfc9abb92fbc1 569 Gene3D G3DSA:3.20.20.450 307 558 1.6E-101 T 12-10-2018 IPR035919 EAL domain superfamily Acife_1328 356c1070929262f50aecfc9abb92fbc1 569 SUPERFAMILY SSF141868 309 556 1.83E-89 T 12-10-2018 IPR035919 EAL domain superfamily Acife_1328 356c1070929262f50aecfc9abb92fbc1 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 132 289 1.1E-55 T 12-10-2018 IPR000160 GGDEF domain Acife_1774 e27a1c83425e8a1ff28c92493786ab61 155 SUPERFAMILY SSF81301 18 142 2.16E-6 T 12-10-2018 Acife_0183 b475f22986e68ee112086defd92d20c1 220 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Acife_0183 b475f22986e68ee112086defd92d20c1 220 SUPERFAMILY SSF51366 1 217 3.63E-78 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Acife_0183 b475f22986e68ee112086defd92d20c1 220 PIRSF PIRSF001461 1 220 5.8E-101 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Acife_0183 b475f22986e68ee112086defd92d20c1 220 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 202 6.8E-89 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Acife_0183 b475f22986e68ee112086defd92d20c1 220 Gene3D G3DSA:3.20.20.70 4 219 3.5E-85 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_0183 b475f22986e68ee112086defd92d20c1 220 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Acife_0183 b475f22986e68ee112086defd92d20c1 220 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 214 9.1E-95 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Acife_2239 f0c6fbb56e1845461960707920c417ac 96 Pfam PF00216 Bacterial DNA-binding protein 3 92 2.2E-28 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2239 f0c6fbb56e1845461960707920c417ac 96 SUPERFAMILY SSF47729 3 93 3.83E-27 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_2239 f0c6fbb56e1845461960707920c417ac 96 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.6E-11 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2239 f0c6fbb56e1845461960707920c417ac 96 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.6E-11 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2239 f0c6fbb56e1845461960707920c417ac 96 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.6E-11 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_2239 f0c6fbb56e1845461960707920c417ac 96 Gene3D G3DSA:4.10.520.10 1 95 1.1E-31 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_2239 f0c6fbb56e1845461960707920c417ac 96 SMART SM00411 3 92 1.6E-28 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0270 b9bcd23a2af5f9b80cb597b96dfcca3a 318 Pfam PF00959 Phage lysozyme 193 304 2.6E-11 T 12-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 Acife_0270 b9bcd23a2af5f9b80cb597b96dfcca3a 318 SUPERFAMILY SSF53955 153 318 2.66E-30 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Acife_0270 b9bcd23a2af5f9b80cb597b96dfcca3a 318 Gene3D G3DSA:1.10.530.40 158 317 1.8E-37 T 12-10-2018 Acife_2293 11d4bbc7a65791ac03ffc629b65af027 98 Gene3D G3DSA:1.10.10.10 6 97 1.7E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2293 11d4bbc7a65791ac03ffc629b65af027 98 SUPERFAMILY SSF46785 18 93 4.35E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2270 77c14c567b61726b30d408f8be3282f7 248 Gene3D G3DSA:3.40.50.720 2 247 6.0E-59 T 12-10-2018 Acife_2270 77c14c567b61726b30d408f8be3282f7 248 Pfam PF00106 short chain dehydrogenase 7 186 1.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2270 77c14c567b61726b30d408f8be3282f7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.8E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2270 77c14c567b61726b30d408f8be3282f7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 5.8E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2270 77c14c567b61726b30d408f8be3282f7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 5.8E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2270 77c14c567b61726b30d408f8be3282f7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 5.8E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2270 77c14c567b61726b30d408f8be3282f7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 5.8E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2270 77c14c567b61726b30d408f8be3282f7 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 7.9E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2270 77c14c567b61726b30d408f8be3282f7 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 7.9E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2270 77c14c567b61726b30d408f8be3282f7 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 7.9E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_2270 77c14c567b61726b30d408f8be3282f7 248 SUPERFAMILY SSF51735 2 237 9.72E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2270 77c14c567b61726b30d408f8be3282f7 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Acife_2979 d8e10981fbdb916584ab3e55ec240b1a 306 SUPERFAMILY SSF88946 8 118 4.71E-6 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Acife_2979 d8e10981fbdb916584ab3e55ec240b1a 306 SUPERFAMILY SSF47413 182 230 1.3E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_0126 85420a418316ddc01deb959060b2c334 74 PIRSF PIRSF039032 1 74 5.4E-26 T 12-10-2018 IPR009387 Toxin HigB-2 Acife_2621 7d98f95c7d0d702962861b025f7e3dc7 346 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 5.6E-26 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Acife_2621 7d98f95c7d0d702962861b025f7e3dc7 346 Pfam PF01548 Transposase 6 146 2.8E-18 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Acife_3263 6cbf7ad65e366f1f9a1b76270448a2b1 280 Gene3D G3DSA:3.40.1190.20 8 274 1.8E-77 T 12-10-2018 IPR029056 Ribokinase-like Acife_3263 6cbf7ad65e366f1f9a1b76270448a2b1 280 Pfam PF08543 Phosphomethylpyrimidine kinase 29 264 7.7E-68 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Acife_3263 6cbf7ad65e366f1f9a1b76270448a2b1 280 SUPERFAMILY SSF53613 18 271 5.89E-63 T 12-10-2018 IPR029056 Ribokinase-like Acife_2916 c7c87cddd90d2de769fecb77294fe27b 84 SUPERFAMILY SSF82657 1 75 2.22E-25 T 12-10-2018 IPR036065 BolA-like superfamily Acife_2916 c7c87cddd90d2de769fecb77294fe27b 84 Pfam PF01722 BolA-like protein 25 74 4.8E-17 T 12-10-2018 IPR002634 BolA protein Acife_2916 c7c87cddd90d2de769fecb77294fe27b 84 PIRSF PIRSF003113 1 82 2.1E-22 T 12-10-2018 IPR002634 BolA protein Acife_2916 c7c87cddd90d2de769fecb77294fe27b 84 Gene3D G3DSA:3.30.300.90 1 75 1.7E-28 T 12-10-2018 Acife_1000 5af17f5a8e83562101a7bc16152d90bc 420 Gene3D G3DSA:3.40.50.2000 122 411 1.6E-59 T 12-10-2018 Acife_1000 5af17f5a8e83562101a7bc16152d90bc 420 Pfam PF00534 Glycosyl transferases group 1 229 394 7.5E-36 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_1000 5af17f5a8e83562101a7bc16152d90bc 420 SUPERFAMILY SSF53756 20 414 1.2E-66 T 12-10-2018 Acife_1000 5af17f5a8e83562101a7bc16152d90bc 420 Gene3D G3DSA:3.40.50.2000 212 401 1.6E-59 T 12-10-2018 Acife_1697 edf17e99d993cb53b2f35c8bfa3aaaed 276 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 200 254 1.2E-7 T 12-10-2018 IPR006260 TonB/TolA, C-terminal Acife_1697 edf17e99d993cb53b2f35c8bfa3aaaed 276 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 201 262 7.4E-9 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 Acife_1697 edf17e99d993cb53b2f35c8bfa3aaaed 276 SUPERFAMILY SSF74653 166 264 1.47E-7 T 12-10-2018 Acife_1697 edf17e99d993cb53b2f35c8bfa3aaaed 276 Gene3D G3DSA:3.30.1150.10 147 270 7.0E-10 T 12-10-2018 Acife_0990 ee6decf052f2f7e77640b27cfa09fe62 301 SUPERFAMILY SSF81345 19 276 1.03E-20 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Acife_0990 ee6decf052f2f7e77640b27cfa09fe62 301 Pfam PF00950 ABC 3 transport family 19 276 6.2E-34 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Acife_2068 8573fdb438d4aadc077ce91bf51c8097 81 SUPERFAMILY SSF52833 2 78 3.96E-12 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2068 8573fdb438d4aadc077ce91bf51c8097 81 Gene3D G3DSA:3.40.30.10 1 78 4.1E-14 T 12-10-2018 Acife_2068 8573fdb438d4aadc077ce91bf51c8097 81 Pfam PF13192 Thioredoxin domain 1 76 1.3E-13 T 12-10-2018 IPR012336 Thioredoxin-like fold Acife_1098 5933a3c56bbff81673e0758e275622ab 162 SUPERFAMILY SSF46785 2 135 1.04E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1098 5933a3c56bbff81673e0758e275622ab 162 Gene3D G3DSA:1.10.10.10 1 144 3.6E-48 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1098 5933a3c56bbff81673e0758e275622ab 162 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Acife_1098 5933a3c56bbff81673e0758e275622ab 162 Pfam PF02082 Transcriptional regulator 1 83 7.9E-28 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Acife_1098 5933a3c56bbff81673e0758e275622ab 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 2.7E-43 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Acife_1525 620d8a6d39e72d9febc35a97e5efa31a 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 298 1.6E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Acife_1525 620d8a6d39e72d9febc35a97e5efa31a 303 Gene3D G3DSA:1.10.3720.10 77 298 7.4E-27 T 12-10-2018 IPR035906 MetI-like superfamily Acife_1525 620d8a6d39e72d9febc35a97e5efa31a 303 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 31 291 4.7E-59 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Acife_1525 620d8a6d39e72d9febc35a97e5efa31a 303 SUPERFAMILY SSF161098 25 290 1.03E-31 T 12-10-2018 IPR035906 MetI-like superfamily Acife_1995 507f93d2b07217c40fbb06c08cf34692 406 Pfam PF11922 Domain of unknown function (DUF3440) 350 394 5.7E-10 T 12-10-2018 IPR021845 Protein of unknown function DUF3440 Acife_1995 507f93d2b07217c40fbb06c08cf34692 406 Pfam PF11922 Domain of unknown function (DUF3440) 238 338 6.9E-31 T 12-10-2018 IPR021845 Protein of unknown function DUF3440 Acife_1995 507f93d2b07217c40fbb06c08cf34692 406 SUPERFAMILY SSF52402 10 233 5.98E-36 T 12-10-2018 Acife_1995 507f93d2b07217c40fbb06c08cf34692 406 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 161 232 8.2E-6 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Acife_1995 507f93d2b07217c40fbb06c08cf34692 406 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 88 7.7E-6 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Acife_1995 507f93d2b07217c40fbb06c08cf34692 406 Gene3D G3DSA:3.40.50.620 8 247 1.7E-32 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_0040 2ae5ec97438564ba38bbb695f1f75e17 81 SUPERFAMILY SSF47598 4 69 2.11E-14 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_0040 2ae5ec97438564ba38bbb695f1f75e17 81 Gene3D G3DSA:1.10.1220.10 9 47 2.2E-8 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Acife_0040 2ae5ec97438564ba38bbb695f1f75e17 81 Pfam PF03869 Arc-like DNA binding domain 10 39 6.1E-6 T 12-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 Acife_1875 e025d569e0f234ac89ef02d83f46f835 824 Hamap MF_01871 UPF0753 protein . 12 815 24.07 T 12-10-2018 IPR018752 Uncharacterised protein family UPF0753 Acife_1875 e025d569e0f234ac89ef02d83f46f835 824 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 17 800 2.7E-269 T 12-10-2018 IPR018752 Uncharacterised protein family UPF0753 Acife_0999 eacb67f72bfb30039d26f108745c588f 472 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 293 429 2.5E-10 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Acife_0999 eacb67f72bfb30039d26f108745c588f 472 SUPERFAMILY SSF53756 258 431 6.28E-18 T 12-10-2018 Acife_0999 eacb67f72bfb30039d26f108745c588f 472 Gene3D G3DSA:3.40.50.2000 284 435 6.5E-24 T 12-10-2018 Acife_1513 9bcbb4a8d7a59ab6fe8a64d9012c7db2 281 Gene3D G3DSA:1.25.40.10 56 280 1.5E-40 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1513 9bcbb4a8d7a59ab6fe8a64d9012c7db2 281 SUPERFAMILY SSF48452 68 267 5.46E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1513 9bcbb4a8d7a59ab6fe8a64d9012c7db2 281 SMART SM00028 166 199 0.13 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1513 9bcbb4a8d7a59ab6fe8a64d9012c7db2 281 SMART SM00028 62 95 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1513 9bcbb4a8d7a59ab6fe8a64d9012c7db2 281 SMART SM00028 200 233 110.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1513 9bcbb4a8d7a59ab6fe8a64d9012c7db2 281 SMART SM00028 96 129 0.0036 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1513 9bcbb4a8d7a59ab6fe8a64d9012c7db2 281 SMART SM00028 234 267 33.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Acife_1513 9bcbb4a8d7a59ab6fe8a64d9012c7db2 281 Pfam PF13432 Tetratricopeptide repeat 103 160 2.7E-5 T 12-10-2018 Acife_1513 9bcbb4a8d7a59ab6fe8a64d9012c7db2 281 Pfam PF13432 Tetratricopeptide repeat 205 253 1.6E-4 T 12-10-2018 Acife_1513 9bcbb4a8d7a59ab6fe8a64d9012c7db2 281 Pfam PF13432 Tetratricopeptide repeat 168 200 0.011 T 12-10-2018 Acife_0680 ea2d4bbd336686b5d7e43872eccee026 298 Pfam PF00483 Nucleotidyl transferase 11 263 1.1E-27 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Acife_0680 ea2d4bbd336686b5d7e43872eccee026 298 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 265 5.5E-111 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Acife_0680 ea2d4bbd336686b5d7e43872eccee026 298 SUPERFAMILY SSF53448 5 278 1.06E-61 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0680 ea2d4bbd336686b5d7e43872eccee026 298 Gene3D G3DSA:3.90.550.10 1 290 7.9E-86 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_3112 b91a938a42c6017f02921b8907f29ce9 223 Gene3D G3DSA:3.10.620.30 1 161 2.0E-14 T 12-10-2018 Acife_3112 b91a938a42c6017f02921b8907f29ce9 223 SUPERFAMILY SSF54001 27 144 7.15E-20 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Acife_3112 b91a938a42c6017f02921b8907f29ce9 223 Pfam PF01841 Transglutaminase-like superfamily 34 134 3.8E-13 T 12-10-2018 IPR002931 Transglutaminase-like Acife_2022 efe8c5bf58275508c600f52b5cd90fe5 218 SUPERFAMILY SSF53271 8 214 8.23E-43 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Acife_2022 efe8c5bf58275508c600f52b5cd90fe5 218 Gene3D G3DSA:3.30.1310.20 62 120 1.5E-22 T 12-10-2018 Acife_2022 efe8c5bf58275508c600f52b5cd90fe5 218 Pfam PF00156 Phosphoribosyl transferase domain 10 192 1.3E-29 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Acife_1463 780b0485c227e722be347555cbfc6f57 155 Gene3D G3DSA:2.60.120.10 70 155 3.6E-19 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_1463 780b0485c227e722be347555cbfc6f57 155 SUPERFAMILY SSF51197 73 155 7.14E-24 T 12-10-2018 Acife_1463 780b0485c227e722be347555cbfc6f57 155 Pfam PF11953 Domain of unknown function (DUF3470) 16 55 2.3E-15 T 12-10-2018 IPR022569 Ferredoxin, C-terminal Acife_1463 780b0485c227e722be347555cbfc6f57 155 Pfam PF09313 Domain of unknown function (DUF1971) 77 151 2.6E-21 T 12-10-2018 IPR015392 Domain of unknown function DUF1971 Acife_0378 d934bf00ced6ccf2c0328c4448a55ded 298 Pfam PF00892 EamA-like transporter family 3 140 9.7E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Acife_0378 d934bf00ced6ccf2c0328c4448a55ded 298 Pfam PF00892 EamA-like transporter family 154 288 1.7E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Acife_0378 d934bf00ced6ccf2c0328c4448a55ded 298 SUPERFAMILY SSF103481 37 142 7.98E-12 T 12-10-2018 Acife_0378 d934bf00ced6ccf2c0328c4448a55ded 298 SUPERFAMILY SSF103481 191 293 1.96E-8 T 12-10-2018 Acife_1536 11c92a26be6983c910c07e973ffbd9e5 71 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 47 9.6E-19 T 12-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB Acife_0307 88122db5d7cafddd86fe5f99be318720 62 Pfam PF01679 Proteolipid membrane potential modulator 1 47 2.3E-6 T 12-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 Acife_1663 5ef2b5cc55663fc68331847b024aa190 394 Pfam PF00266 Aminotransferase class-V 7 366 3.1E-80 T 12-10-2018 IPR000192 Aminotransferase class V domain Acife_1663 5ef2b5cc55663fc68331847b024aa190 394 PIRSF PIRSF005572 4 377 2.4E-124 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Acife_1663 5ef2b5cc55663fc68331847b024aa190 394 SUPERFAMILY SSF53383 7 373 7.85E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Acife_1663 5ef2b5cc55663fc68331847b024aa190 394 Gene3D G3DSA:3.40.640.10 18 256 5.3E-132 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Acife_1663 5ef2b5cc55663fc68331847b024aa190 394 Gene3D G3DSA:3.90.1150.10 7 371 5.3E-132 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Acife_1663 5ef2b5cc55663fc68331847b024aa190 394 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Acife_1556 d53e6905250558e8d5def9c7854a21a9 86 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 24 1.4E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_3215 b1fc66e8db0dbe6ddaa158f7e93882f0 263 Gene3D G3DSA:3.30.450.40 83 253 1.6E-44 T 12-10-2018 IPR029016 GAF-like domain superfamily Acife_3215 b1fc66e8db0dbe6ddaa158f7e93882f0 263 SMART SM00346 12 101 3.4E-12 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Acife_3215 b1fc66e8db0dbe6ddaa158f7e93882f0 263 Pfam PF01614 Bacterial transcriptional regulator 129 247 5.4E-20 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal Acife_3215 b1fc66e8db0dbe6ddaa158f7e93882f0 263 SUPERFAMILY SSF46785 12 82 8.25E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_3215 b1fc66e8db0dbe6ddaa158f7e93882f0 263 Pfam PF09339 IclR helix-turn-helix domain 15 54 4.0E-7 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Acife_3215 b1fc66e8db0dbe6ddaa158f7e93882f0 263 SUPERFAMILY SSF55781 69 251 1.31E-40 T 12-10-2018 Acife_3215 b1fc66e8db0dbe6ddaa158f7e93882f0 263 Gene3D G3DSA:1.10.10.10 1 72 1.6E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_1117 061661f278f54a4b2a9406de169cb5d4 261 Pfam PF00005 ABC transporter 24 172 1.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_1117 061661f278f54a4b2a9406de169cb5d4 261 SUPERFAMILY SSF52540 7 233 6.76E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1117 061661f278f54a4b2a9406de169cb5d4 261 Gene3D G3DSA:3.40.50.300 9 252 3.7E-63 T 12-10-2018 Acife_1117 061661f278f54a4b2a9406de169cb5d4 261 SMART SM00382 31 221 1.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1117 061661f278f54a4b2a9406de169cb5d4 261 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_3044 caebdbd730659b48afbf33b02c8c0282 228 Gene3D G3DSA:3.40.30.10 42 216 7.2E-25 T 12-10-2018 Acife_3044 caebdbd730659b48afbf33b02c8c0282 228 SUPERFAMILY SSF52833 39 211 1.9E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0103 95616e85236966b93369acb82446932e 229 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 192 1.1E-26 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Acife_2003 cd716eeaf229f95638e7d26bf1723555 352 SUPERFAMILY SSF103481 240 336 9.94E-9 T 12-10-2018 Acife_2003 cd716eeaf229f95638e7d26bf1723555 352 SUPERFAMILY SSF103481 92 191 4.18E-8 T 12-10-2018 Acife_2003 cd716eeaf229f95638e7d26bf1723555 352 Pfam PF00892 EamA-like transporter family 204 330 6.2E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Acife_2003 cd716eeaf229f95638e7d26bf1723555 352 Pfam PF00892 EamA-like transporter family 62 188 1.6E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Acife_1278 d2eb279ef0e50c013b487839cd24b757 367 Gene3D G3DSA:3.20.20.70 24 295 9.8E-30 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1278 d2eb279ef0e50c013b487839cd24b757 367 TIGRFAM TIGR03470 HpnH: hopanoid biosynthesis associated radical SAM protein HpnH 1 321 3.3E-159 T 12-10-2018 IPR017833 Hopanoid biosynthesis associated radical SAM protein HpnH Acife_1278 d2eb279ef0e50c013b487839cd24b757 367 Pfam PF04055 Radical SAM superfamily 34 186 7.0E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Acife_1278 d2eb279ef0e50c013b487839cd24b757 367 SUPERFAMILY SSF102114 23 310 2.22E-49 T 12-10-2018 Acife_1278 d2eb279ef0e50c013b487839cd24b757 367 Pfam PF11946 Domain of unknown function (DUF3463) 195 331 9.3E-57 T 12-10-2018 IPR022563 Domain of unknown function DUF3463 Acife_2841 a59c7b9dbba02c22d7619fe2ce5c016a 254 Pfam PF00535 Glycosyl transferase family 2 11 167 1.5E-20 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_2841 a59c7b9dbba02c22d7619fe2ce5c016a 254 Gene3D G3DSA:3.90.550.10 6 234 2.0E-21 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2841 a59c7b9dbba02c22d7619fe2ce5c016a 254 SUPERFAMILY SSF53448 11 246 6.83E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_0235 7d0e5317090b3869840151bdb03c6cbf 346 SUPERFAMILY SSF50685 92 181 1.88E-11 T 12-10-2018 IPR036908 RlpA-like domain superfamily Acife_0235 7d0e5317090b3869840151bdb03c6cbf 346 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 90 185 1.5E-32 T 12-10-2018 IPR012997 Rare lipoprotein A Acife_0235 7d0e5317090b3869840151bdb03c6cbf 346 Gene3D G3DSA:2.40.40.10 87 180 7.7E-32 T 12-10-2018 IPR036908 RlpA-like domain superfamily Acife_0235 7d0e5317090b3869840151bdb03c6cbf 346 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 18 180 21.45 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Acife_0235 7d0e5317090b3869840151bdb03c6cbf 346 Pfam PF03330 Lytic transglycolase 88 176 6.2E-22 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Acife_1109 81ea74e65474cf3524abee568cab8471 140 Gene3D G3DSA:3.40.50.1010 1 130 2.3E-29 T 12-10-2018 Acife_1109 81ea74e65474cf3524abee568cab8471 140 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 134 11.263 T 12-10-2018 IPR022907 VapC family GO:0004540 Acife_1109 81ea74e65474cf3524abee568cab8471 140 SUPERFAMILY SSF88723 3 136 2.47E-18 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_1109 81ea74e65474cf3524abee568cab8471 140 Pfam PF01850 PIN domain 5 124 4.7E-10 T 12-10-2018 IPR002716 PIN domain Acife_2577 98a2dc429b41ddbbacaf3abf457a8b7a 653 Pfam PF06527 TniQ 23 71 1.2E-7 T 12-10-2018 IPR009492 TniQ Acife_2731 cb930fa1f7a8a79f0d15be0bc7bdc143 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 32.422 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2731 cb930fa1f7a8a79f0d15be0bc7bdc143 154 SUPERFAMILY SSF52121 5 154 3.4E-64 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2731 cb930fa1f7a8a79f0d15be0bc7bdc143 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 151 5.7E-61 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2731 cb930fa1f7a8a79f0d15be0bc7bdc143 154 Gene3D G3DSA:3.40.50.960 2 154 1.8E-64 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2731 cb930fa1f7a8a79f0d15be0bc7bdc143 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 3.4E-60 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Acife_2311 a045aeacbe6f1f42226a383aaeb7529c 288 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 2 244 3.3E-37 T 12-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 Acife_2311 a045aeacbe6f1f42226a383aaeb7529c 288 Pfam PF02811 PHP domain 3 87 2.7E-11 T 12-10-2018 IPR004013 PHP domain GO:0003824 Acife_2311 a045aeacbe6f1f42226a383aaeb7529c 288 SUPERFAMILY SSF89550 1 264 6.02E-43 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Acife_2311 a045aeacbe6f1f42226a383aaeb7529c 288 SMART SM00481 2 84 1.2E-5 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Acife_2311 a045aeacbe6f1f42226a383aaeb7529c 288 Gene3D G3DSA:3.20.20.140 1 272 1.6E-64 T 12-10-2018 Acife_1493 0f9cd77a55dd61fd974b18e957199150 136 Gene3D G3DSA:2.170.150.70 5 117 9.8E-15 T 12-10-2018 Acife_1493 0f9cd77a55dd61fd974b18e957199150 136 SUPERFAMILY SSF51316 1 135 1.46E-45 T 12-10-2018 IPR011057 Mss4-like superfamily Acife_1493 0f9cd77a55dd61fd974b18e957199150 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 117 6.0E-27 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Acife_2191 02737d773694a425e0ed8451d4200c45 197 Pfam PF00571 CBS domain 43 90 5.8E-8 T 12-10-2018 IPR000644 CBS domain Acife_2191 02737d773694a425e0ed8451d4200c45 197 SUPERFAMILY SSF54631 44 172 8.22E-13 T 12-10-2018 Acife_2191 02737d773694a425e0ed8451d4200c45 197 Gene3D G3DSA:3.10.580.10 31 176 4.3E-12 T 12-10-2018 Acife_2645 3d7e7eb46e03f3884f055dd8622449b2 411 SUPERFAMILY SSF63411 7 213 5.5E-47 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Acife_2645 3d7e7eb46e03f3884f055dd8622449b2 411 Pfam PF05193 Peptidase M16 inactive domain 174 344 8.7E-21 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Acife_2645 3d7e7eb46e03f3884f055dd8622449b2 411 Gene3D G3DSA:3.30.830.10 224 407 4.8E-41 T 12-10-2018 Acife_2645 3d7e7eb46e03f3884f055dd8622449b2 411 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 38 61 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Acife_2645 3d7e7eb46e03f3884f055dd8622449b2 411 Pfam PF00675 Insulinase (Peptidase family M16) 18 162 5.6E-29 T 12-10-2018 IPR011765 Peptidase M16, N-terminal Acife_2645 3d7e7eb46e03f3884f055dd8622449b2 411 Gene3D G3DSA:3.30.830.10 9 216 7.8E-54 T 12-10-2018 Acife_2645 3d7e7eb46e03f3884f055dd8622449b2 411 SUPERFAMILY SSF63411 229 399 1.83E-34 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Acife_3191 ef5ad61bab4105789c81cf5d5a3a289d 288 Gene3D G3DSA:1.10.287.80 6 284 7.5E-105 T 12-10-2018 Acife_3191 ef5ad61bab4105789c81cf5d5a3a289d 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 8.5E-33 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3191 ef5ad61bab4105789c81cf5d5a3a289d 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 8.5E-33 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3191 ef5ad61bab4105789c81cf5d5a3a289d 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 8.5E-33 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3191 ef5ad61bab4105789c81cf5d5a3a289d 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 8.5E-33 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3191 ef5ad61bab4105789c81cf5d5a3a289d 288 Gene3D G3DSA:3.40.1380.10 61 207 7.5E-105 T 12-10-2018 Acife_3191 ef5ad61bab4105789c81cf5d5a3a289d 288 Pfam PF00231 ATP synthase 3 287 1.3E-92 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3191 ef5ad61bab4105789c81cf5d5a3a289d 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3191 ef5ad61bab4105789c81cf5d5a3a289d 288 SUPERFAMILY SSF52943 2 288 2.35E-91 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3191 ef5ad61bab4105789c81cf5d5a3a289d 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 3.8E-109 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_3191 ef5ad61bab4105789c81cf5d5a3a289d 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 35.324 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Acife_2681 65ef307449b6bf1bd3ed9caad43326dc 150 Pfam PF00692 dUTPase 16 148 4.1E-30 T 12-10-2018 IPR029054 dUTPase-like Acife_2681 65ef307449b6bf1bd3ed9caad43326dc 150 SUPERFAMILY SSF51283 4 149 3.79E-44 T 12-10-2018 IPR036157 dUTPase-like superfamily Acife_2681 65ef307449b6bf1bd3ed9caad43326dc 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 12 149 1.3E-39 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Acife_2681 65ef307449b6bf1bd3ed9caad43326dc 150 Gene3D G3DSA:2.70.40.10 1 149 9.3E-44 T 12-10-2018 IPR036157 dUTPase-like superfamily Acife_1303 58ae0e705cbeda821e37c9be3bd15aa6 452 Gene3D G3DSA:2.30.42.10 222 309 4.1E-15 T 12-10-2018 Acife_1303 58ae0e705cbeda821e37c9be3bd15aa6 452 Gene3D G3DSA:2.30.42.10 128 221 2.0E-15 T 12-10-2018 Acife_1303 58ae0e705cbeda821e37c9be3bd15aa6 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 450 3.1E-107 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Acife_1303 58ae0e705cbeda821e37c9be3bd15aa6 452 SUPERFAMILY SSF50156 209 276 3.29E-12 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Acife_1303 58ae0e705cbeda821e37c9be3bd15aa6 452 SUPERFAMILY SSF50156 90 195 2.63E-14 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Acife_1303 58ae0e705cbeda821e37c9be3bd15aa6 452 SMART SM00228 108 188 0.059 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_1303 58ae0e705cbeda821e37c9be3bd15aa6 452 SMART SM00228 207 279 0.025 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Acife_1303 58ae0e705cbeda821e37c9be3bd15aa6 452 Pfam PF02163 Peptidase family M50 9 437 2.0E-79 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Acife_0420 af38e4ff128e3beb45af939ec307a423 279 Gene3D G3DSA:3.40.50.300 96 275 1.7E-37 T 12-10-2018 Acife_0420 af38e4ff128e3beb45af939ec307a423 279 SUPERFAMILY SSF52540 90 257 2.36E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0420 af38e4ff128e3beb45af939ec307a423 279 Pfam PF01695 IstB-like ATP binding protein 81 258 1.2E-24 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Acife_0420 af38e4ff128e3beb45af939ec307a423 279 SMART SM00382 130 260 4.9E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1364 b9820d0a8963fc2432f8cd900872e2bf 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 184 5.7E-51 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Acife_1364 b9820d0a8963fc2432f8cd900872e2bf 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 2.9E-16 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Acife_1364 b9820d0a8963fc2432f8cd900872e2bf 195 PIRSF PIRSF000847 1 190 1.5E-45 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Acife_1364 b9820d0a8963fc2432f8cd900872e2bf 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Acife_1364 b9820d0a8963fc2432f8cd900872e2bf 195 Gene3D G3DSA:1.20.120.1760 2 179 8.1E-15 T 12-10-2018 Acife_3068 16a25a30a4ece24dcd1f2c614b82c1b6 109 Gene3D G3DSA:1.20.120.910 3 80 1.3E-6 T 12-10-2018 Acife_0044 b892283d765659134ce1f64946221a06 96 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 8 82 4.8E-19 T 12-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system Acife_0044 b892283d765659134ce1f64946221a06 96 Gene3D G3DSA:3.10.450.530 1 79 5.3E-10 T 12-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily Acife_2275 2bb78c9e9d7f818f6bdc5d784f4ed0f8 1227 Pfam PF13502 AsmA-like C-terminal region 990 1211 6.5E-33 T 12-10-2018 IPR032712 AsmA-like, C-terminal Acife_2275 2bb78c9e9d7f818f6bdc5d784f4ed0f8 1227 Pfam PF13116 Protein of unknown function 489 755 3.0E-38 T 12-10-2018 IPR025263 Domain of unknown function DUF3971 Acife_0527 14dd62f6f99017bc7f2bbbef02ebd6df 995 SUPERFAMILY SSF52540 89 564 3.76E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0527 14dd62f6f99017bc7f2bbbef02ebd6df 995 Pfam PF04851 Type III restriction enzyme, res subunit 11 251 1.1E-12 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Acife_0527 14dd62f6f99017bc7f2bbbef02ebd6df 995 Gene3D G3DSA:3.40.50.300 454 598 2.5E-8 T 12-10-2018 Acife_0527 14dd62f6f99017bc7f2bbbef02ebd6df 995 SUPERFAMILY SSF52540 10 256 2.07E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0527 14dd62f6f99017bc7f2bbbef02ebd6df 995 Gene3D G3DSA:3.40.50.300 69 270 1.2E-10 T 12-10-2018 Acife_0659 7b5d0faea527f9b1e39ac05ea9175009 539 Gene3D G3DSA:3.60.20.40 353 538 3.0E-61 T 12-10-2018 Acife_0659 7b5d0faea527f9b1e39ac05ea9175009 539 Pfam PF01019 Gamma-glutamyltranspeptidase 30 534 1.3E-121 T 12-10-2018 Acife_0659 7b5d0faea527f9b1e39ac05ea9175009 539 Gene3D G3DSA:1.10.246.130 246 347 9.8E-16 T 12-10-2018 Acife_0659 7b5d0faea527f9b1e39ac05ea9175009 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 230 246 3.1E-26 T 12-10-2018 Acife_0659 7b5d0faea527f9b1e39ac05ea9175009 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 132 151 3.1E-26 T 12-10-2018 Acife_0659 7b5d0faea527f9b1e39ac05ea9175009 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 37 62 3.1E-26 T 12-10-2018 Acife_0659 7b5d0faea527f9b1e39ac05ea9175009 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 259 278 3.1E-26 T 12-10-2018 Acife_0659 7b5d0faea527f9b1e39ac05ea9175009 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 377 395 3.1E-26 T 12-10-2018 Acife_0659 7b5d0faea527f9b1e39ac05ea9175009 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 353 371 3.1E-26 T 12-10-2018 Acife_0659 7b5d0faea527f9b1e39ac05ea9175009 539 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 408 423 3.1E-26 T 12-10-2018 Acife_0659 7b5d0faea527f9b1e39ac05ea9175009 539 SUPERFAMILY SSF56235 11 537 4.05E-140 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Acife_0302 8b50b9dd21f0c4adb4bbb58a4d77138a 360 SUPERFAMILY SSF116734 178 350 1.26E-32 T 12-10-2018 Acife_0302 8b50b9dd21f0c4adb4bbb58a4d77138a 360 Pfam PF01420 Type I restriction modification DNA specificity domain 182 316 2.4E-10 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Acife_0302 8b50b9dd21f0c4adb4bbb58a4d77138a 360 Pfam PF01420 Type I restriction modification DNA specificity domain 4 148 4.7E-12 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Acife_0302 8b50b9dd21f0c4adb4bbb58a4d77138a 360 SUPERFAMILY SSF116734 2 161 2.29E-32 T 12-10-2018 Acife_0302 8b50b9dd21f0c4adb4bbb58a4d77138a 360 Gene3D G3DSA:3.90.220.20 1 119 8.9E-18 T 12-10-2018 Acife_0302 8b50b9dd21f0c4adb4bbb58a4d77138a 360 Gene3D G3DSA:3.90.220.20 175 304 4.2E-23 T 12-10-2018 Acife_3270 3157689d0ae2f891f5f15c32bd9ec223 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 157 185 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Acife_3270 3157689d0ae2f891f5f15c32bd9ec223 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 2.1E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3270 3157689d0ae2f891f5f15c32bd9ec223 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 2.1E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3270 3157689d0ae2f891f5f15c32bd9ec223 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.1E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3270 3157689d0ae2f891f5f15c32bd9ec223 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 2.1E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3270 3157689d0ae2f891f5f15c32bd9ec223 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 2.1E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3270 3157689d0ae2f891f5f15c32bd9ec223 269 SUPERFAMILY SSF51735 14 247 2.05E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_3270 3157689d0ae2f891f5f15c32bd9ec223 269 Pfam PF00106 short chain dehydrogenase 18 208 2.5E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_3270 3157689d0ae2f891f5f15c32bd9ec223 269 Gene3D G3DSA:3.40.50.720 5 250 3.3E-57 T 12-10-2018 Acife_0316 0f99781c0bb0648b5fb4ceebcde27e6f 309 SUPERFAMILY SSF117892 51 185 4.71E-37 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily Acife_0316 0f99781c0bb0648b5fb4ceebcde27e6f 309 Gene3D G3DSA:3.30.479.30 48 180 4.9E-37 T 12-10-2018 Acife_0316 0f99781c0bb0648b5fb4ceebcde27e6f 309 SMART SM00244 20 178 4.5E-55 T 12-10-2018 IPR001107 Band 7 domain Acife_0316 0f99781c0bb0648b5fb4ceebcde27e6f 309 Pfam PF16200 C-terminal region of band_7 244 302 7.0E-18 T 12-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 Acife_0316 0f99781c0bb0648b5fb4ceebcde27e6f 309 Pfam PF01145 SPFH domain / Band 7 family 24 194 4.9E-28 T 12-10-2018 IPR001107 Band 7 domain Acife_0316 0f99781c0bb0648b5fb4ceebcde27e6f 309 PRINTS PR00721 Stomatin signature 27 49 7.0E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Acife_0316 0f99781c0bb0648b5fb4ceebcde27e6f 309 PRINTS PR00721 Stomatin signature 75 96 7.0E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Acife_0316 0f99781c0bb0648b5fb4ceebcde27e6f 309 PRINTS PR00721 Stomatin signature 110 127 7.0E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Acife_0316 0f99781c0bb0648b5fb4ceebcde27e6f 309 PRINTS PR00721 Stomatin signature 154 172 7.0E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Acife_0316 0f99781c0bb0648b5fb4ceebcde27e6f 309 PRINTS PR00721 Stomatin signature 173 194 7.0E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Acife_0316 0f99781c0bb0648b5fb4ceebcde27e6f 309 PRINTS PR00721 Stomatin signature 130 153 7.0E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 Acife_1834 f91d634c479e2a0299c2e6154bf24ef1 162 PIRSF PIRSF006162 1 162 7.8E-45 T 12-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Acife_1834 f91d634c479e2a0299c2e6154bf24ef1 162 Pfam PF04608 Phosphatidylglycerophosphatase A 8 156 9.7E-48 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 Acife_1834 f91d634c479e2a0299c2e6154bf24ef1 162 SUPERFAMILY SSF101307 4 158 6.67E-38 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 Acife_1193 c1b850c2c45d7623f15f76d726f33e1a 111 Gene3D G3DSA:3.30.420.470 3 102 2.6E-8 T 12-10-2018 Acife_1193 c1b850c2c45d7623f15f76d726f33e1a 111 Pfam PF13358 DDE superfamily endonuclease 16 76 2.5E-15 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain Acife_2020 91d87c200a0920be04efe85d5cd4d354 841 Gene3D G3DSA:3.40.50.2000 422 704 2.3E-38 T 12-10-2018 Acife_2020 91d87c200a0920be04efe85d5cd4d354 841 Pfam PF00343 Carbohydrate phosphorylase 270 620 1.0E-21 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Acife_2020 91d87c200a0920be04efe85d5cd4d354 841 Gene3D G3DSA:3.40.50.2000 265 421 2.3E-14 T 12-10-2018 Acife_2020 91d87c200a0920be04efe85d5cd4d354 841 Pfam PF11897 Protein of unknown function (DUF3417) 12 119 1.7E-31 T 12-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Acife_2020 91d87c200a0920be04efe85d5cd4d354 841 PIRSF PIRSF000460 5 785 2.4E-242 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Acife_2020 91d87c200a0920be04efe85d5cd4d354 841 SUPERFAMILY SSF53756 10 712 5.1E-190 T 12-10-2018 Acife_2020 91d87c200a0920be04efe85d5cd4d354 841 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 106 709 1.2E-239 T 12-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Acife_2020 91d87c200a0920be04efe85d5cd4d354 841 Gene3D G3DSA:3.40.50.2000 113 187 2.3E-9 T 12-10-2018 Acife_1900 6bf0b755b83afb254931c51eae5b758f 801 Gene3D G3DSA:2.40.128.130 502 800 9.8E-15 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily Acife_1900 6bf0b755b83afb254931c51eae5b758f 801 SMART SM00869 525 791 6.8E-9 T 12-10-2018 IPR005546 Autotransporter beta-domain Acife_1900 6bf0b755b83afb254931c51eae5b758f 801 SUPERFAMILY SSF103515 497 801 6.93E-14 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily Acife_1820 79c300af82534e937ddeaeb366a08065 265 Gene3D G3DSA:3.40.50.700 4 167 4.6E-37 T 12-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Acife_1820 79c300af82534e937ddeaeb366a08065 265 SUPERFAMILY SSF56770 5 217 1.24E-40 T 12-10-2018 Acife_1820 79c300af82534e937ddeaeb366a08065 265 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 16 152 6.6E-24 T 12-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2832 c3a131af62433e8a0aa01291508e1a19 210 Pfam PF13717 zinc-ribbon domain 1 35 1.9E-9 T 12-10-2018 IPR011723 Zinc finger/thioredoxin putative Acife_2832 c3a131af62433e8a0aa01291508e1a19 210 Pfam PF11906 Protein of unknown function (DUF3426) 63 205 8.4E-24 T 12-10-2018 IPR021834 Protein of unknown function DUF3426 Acife_2832 c3a131af62433e8a0aa01291508e1a19 210 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 35 4.2E-5 T 12-10-2018 IPR011723 Zinc finger/thioredoxin putative Acife_1543 7b1e35875427056ddbcbac629514feac 90 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 88 2.7E-9 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Acife_1543 7b1e35875427056ddbcbac629514feac 90 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 88 1.5E-13 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Acife_1543 7b1e35875427056ddbcbac629514feac 90 Gene3D G3DSA:3.30.2310.20 1 89 2.4E-31 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_1543 7b1e35875427056ddbcbac629514feac 90 SUPERFAMILY SSF143011 3 87 9.55E-20 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_1201 e37fec8ef556117c41d8bb7be6a22fa3 201 SUPERFAMILY SSF56399 16 118 1.44E-11 T 12-10-2018 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 Gene3D G3DSA:3.40.50.1260 171 384 7.1E-146 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 Gene3D G3DSA:3.40.50.1260 8 392 7.1E-146 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 394 38.516 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 Pfam PF00162 Phosphoglycerate kinase 6 384 2.9E-136 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 SUPERFAMILY SSF53748 4 394 6.6E-137 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 PIRSF PIRSF000724 1 401 3.7E-137 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 1.3E-75 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 PRINTS PR00477 Phosphoglycerate kinase family signature 370 387 1.3E-75 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 1.3E-75 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 1.3E-75 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 1.3E-75 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 1.3E-75 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 1.3E-75 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 PRINTS PR00477 Phosphoglycerate kinase family signature 347 358 1.3E-75 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0804 89ee7f29540e5ac5438f351b0a9d9195 401 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.3E-75 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 Gene3D G3DSA:3.40.50.880 1 187 9.1E-62 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.5E-13 T 12-10-2018 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.5E-13 T 12-10-2018 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 2.5E-13 T 12-10-2018 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 Pfam PF00117 Glutamine amidotransferase class-I 4 185 7.8E-55 T 12-10-2018 IPR017926 Glutamine amidotransferase Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 4.9E-86 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.1E-36 T 12-10-2018 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.1E-36 T 12-10-2018 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.1E-36 T 12-10-2018 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.1E-36 T 12-10-2018 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.1E-36 T 12-10-2018 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.1E-36 T 12-10-2018 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 SUPERFAMILY SSF52317 1 186 9.72E-56 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.2E-5 T 12-10-2018 Acife_0176 ee56685bcd6625dabb9af45888b5b3f9 190 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.2E-5 T 12-10-2018 Acife_1544 ea514bee91f2b9264b2b7e484b827b22 74 Pfam PF05509 TraY domain 4 49 3.1E-9 T 12-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 Acife_1544 ea514bee91f2b9264b2b7e484b827b22 74 SUPERFAMILY SSF47598 2 41 4.74E-10 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_3135 591941bec8103b833553d7c570e5696f 211 Gene3D G3DSA:3.40.50.300 5 210 3.0E-44 T 12-10-2018 Acife_3135 591941bec8103b833553d7c570e5696f 211 PIRSF PIRSF009320 4 210 1.9E-33 T 12-10-2018 Acife_3135 591941bec8103b833553d7c570e5696f 211 SUPERFAMILY SSF52540 4 208 2.88E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3135 591941bec8103b833553d7c570e5696f 211 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 186 3.6E-17 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Acife_1833 923c49982859a136108377bb1421dc27 282 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 139 276 1.2E-37 T 12-10-2018 IPR008136 CinA, C-terminal Acife_1833 923c49982859a136108377bb1421dc27 282 Pfam PF02464 Competence-damaged protein 136 277 2.3E-43 T 12-10-2018 IPR008136 CinA, C-terminal Acife_1833 923c49982859a136108377bb1421dc27 282 Gene3D G3DSA:3.90.950.20 126 281 7.7E-47 T 12-10-2018 IPR036653 CinA-like, C-terminal Acife_1833 923c49982859a136108377bb1421dc27 282 SUPERFAMILY SSF142433 133 281 1.57E-43 T 12-10-2018 IPR036653 CinA-like, C-terminal Acife_2665 b8df15f40a5757f203401ce0f69f58da 237 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 229 4.7E-65 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Acife_2665 b8df15f40a5757f203401ce0f69f58da 237 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4 230 8.5E-61 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Acife_2665 b8df15f40a5757f203401ce0f69f58da 237 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 230 41.871 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Acife_2665 b8df15f40a5757f203401ce0f69f58da 237 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 107 114 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Acife_2665 b8df15f40a5757f203401ce0f69f58da 237 SUPERFAMILY SSF53448 4 230 5.41E-51 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2665 b8df15f40a5757f203401ce0f69f58da 237 Gene3D G3DSA:3.90.550.10 1 234 3.2E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_2508 78dbb6b8e0fafc3a7d06de776a5105f0 495 SUPERFAMILY SSF48452 84 452 2.81E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_2643 ba57a40e7d8d8ed6df8b35ffb5a58d8e 266 Pfam PF08241 Methyltransferase domain 85 131 2.9E-8 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Acife_2643 ba57a40e7d8d8ed6df8b35ffb5a58d8e 266 Gene3D G3DSA:3.40.50.150 18 198 7.8E-17 T 12-10-2018 Acife_2643 ba57a40e7d8d8ed6df8b35ffb5a58d8e 266 SUPERFAMILY SSF53335 87 190 2.19E-16 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2872 109312f4249f78ccc03a4505bd30a224 520 Pfam PF07690 Major Facilitator Superfamily 21 409 2.1E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Acife_2872 109312f4249f78ccc03a4505bd30a224 520 SUPERFAMILY SSF103473 5 188 4.05E-24 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_2872 109312f4249f78ccc03a4505bd30a224 520 SUPERFAMILY SSF103473 202 483 1.02E-16 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_3239 454d46972876edc88b1e901bc43ee2eb 249 Gene3D G3DSA:3.40.50.300 24 244 1.2E-45 T 12-10-2018 Acife_3239 454d46972876edc88b1e901bc43ee2eb 249 SMART SM00382 55 244 1.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_3239 454d46972876edc88b1e901bc43ee2eb 249 SUPERFAMILY SSF52540 41 236 1.07E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_3239 454d46972876edc88b1e901bc43ee2eb 249 Pfam PF00005 ABC transporter 46 177 3.6E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_3239 454d46972876edc88b1e901bc43ee2eb 249 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Acife_2237 6496b70a3dd40a631ac3d02a03ccbe22 371 Pfam PF12698 ABC-2 family transporter protein 24 363 1.7E-44 T 12-10-2018 Acife_1037 90ca2c1c7c717d7dd3097cd13e65a4fc 106 PIRSF PIRSF039032 1 105 7.6E-35 T 12-10-2018 IPR009387 Toxin HigB-2 Acife_0148 91b0d012df96080f706f83146fbb16fa 86 SMART SM00834 1 42 1.7E-17 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Acife_0148 91b0d012df96080f706f83146fbb16fa 86 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 1.8E-21 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Acife_0148 91b0d012df96080f706f83146fbb16fa 86 Pfam PF09723 Zinc ribbon domain 1 40 1.7E-15 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Acife_2372 733114234f260cf824d0fcebbbf4baf6 482 Gene3D G3DSA:3.30.950.30 3 134 1.1E-31 T 12-10-2018 IPR038461 Schlafen, AAA domain superfamily Acife_2372 733114234f260cf824d0fcebbbf4baf6 482 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 291 375 2.8E-24 T 12-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Acife_2372 733114234f260cf824d0fcebbbf4baf6 482 Gene3D G3DSA:3.30.565.60 222 377 2.3E-41 T 12-10-2018 IPR038475 RecG, C-terminal domain superfamily Acife_2372 733114234f260cf824d0fcebbbf4baf6 482 Pfam PF04326 Putative DNA-binding domain 13 128 2.3E-22 T 12-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Acife_3040 184691a19f03943caaff7ab35f83e67c 353 Gene3D G3DSA:2.60.120.260 158 349 5.6E-8 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Acife_1216 0b473a937209f86ebc0accd1a510bc92 141 Gene3D G3DSA:3.40.50.10110 2 139 8.2E-24 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Acife_1216 0b473a937209f86ebc0accd1a510bc92 141 Pfam PF04364 DNA polymerase III chi subunit, HolC 5 134 1.0E-22 T 12-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 Acife_1216 0b473a937209f86ebc0accd1a510bc92 141 SUPERFAMILY SSF102400 6 139 7.72E-23 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Acife_1709 967cf14074bb26a4d3064a7091514c48 329 SUPERFAMILY SSF51735 3 327 2.03E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_1709 967cf14074bb26a4d3064a7091514c48 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 239 1.6E-45 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Acife_1709 967cf14074bb26a4d3064a7091514c48 329 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 326 1.7E-128 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 Acife_1709 967cf14074bb26a4d3064a7091514c48 329 Gene3D G3DSA:3.90.25.10 166 308 1.6E-124 T 12-10-2018 Acife_1709 967cf14074bb26a4d3064a7091514c48 329 Gene3D G3DSA:3.40.50.720 3 321 1.6E-124 T 12-10-2018 Acife_1709 967cf14074bb26a4d3064a7091514c48 329 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 327 48.698 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 Acife_2902 cf6fd1f3c110adfb89d266bc17dc7b0d 113 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 4.7E-29 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Acife_2902 cf6fd1f3c110adfb89d266bc17dc7b0d 113 SUPERFAMILY SSF69754 2 103 9.55E-34 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like Acife_2902 cf6fd1f3c110adfb89d266bc17dc7b0d 113 Gene3D G3DSA:3.30.160.100 1 98 1.7E-33 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like Acife_2902 cf6fd1f3c110adfb89d266bc17dc7b0d 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 95 9.2E-27 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Acife_2447 aca20118e23bd89ad12c90a96054e9b8 290 Pfam PF00795 Carbon-nitrogen hydrolase 4 262 3.4E-55 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Acife_2447 aca20118e23bd89ad12c90a96054e9b8 290 Gene3D G3DSA:3.60.110.10 1 288 3.4E-109 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Acife_2447 aca20118e23bd89ad12c90a96054e9b8 290 SUPERFAMILY SSF56317 3 279 4.97E-82 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Acife_2447 aca20118e23bd89ad12c90a96054e9b8 290 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 3 279 3.3E-139 T 12-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 Acife_2173 b737f42f4ae2cf4fd0f9de382e1a04ec 322 Pfam PF00561 alpha/beta hydrolase fold 59 299 2.7E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Acife_2173 b737f42f4ae2cf4fd0f9de382e1a04ec 322 SUPERFAMILY SSF53474 18 318 1.5E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_2173 b737f42f4ae2cf4fd0f9de382e1a04ec 322 Gene3D G3DSA:3.40.50.1820 38 306 2.3E-24 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_2173 b737f42f4ae2cf4fd0f9de382e1a04ec 322 PIRSF PIRSF005211 4 321 4.5E-101 T 12-10-2018 IPR012020 AB hydrolase 4 family Acife_2405 2d63868e62415a3c357d27fe843e4c05 362 PIRSF PIRSF015268 10 355 3.9E-127 T 12-10-2018 IPR011204 Virulence protein RhuM-like Acife_2405 2d63868e62415a3c357d27fe843e4c05 362 Pfam PF13310 Virulence protein RhuM family 76 328 1.6E-103 T 12-10-2018 IPR011204 Virulence protein RhuM-like Acife_0104 d6089b0b1ad28aceacc082206d120212 133 Gene3D G3DSA:3.30.420.270 60 127 2.8E-9 T 12-10-2018 Acife_0104 d6089b0b1ad28aceacc082206d120212 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 130 2.0E-27 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Acife_2025 2cb7d05746bdc455a75df3fedec21be9 86 Pfam PF04226 Transglycosylase associated protein 35 85 1.6E-8 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Acife_2235 225a0ab93669873e46d8e154ff37bb91 344 SUPERFAMILY SSF111369 179 328 8.24E-7 T 12-10-2018 Acife_2235 225a0ab93669873e46d8e154ff37bb91 344 SUPERFAMILY SSF111369 51 104 9.68E-7 T 12-10-2018 Acife_2235 225a0ab93669873e46d8e154ff37bb91 344 Gene3D G3DSA:2.40.30.170 237 329 4.6E-17 T 12-10-2018 Acife_2235 225a0ab93669873e46d8e154ff37bb91 344 Gene3D G3DSA:1.10.287.470 79 102 3.0E-11 T 12-10-2018 Acife_2235 225a0ab93669873e46d8e154ff37bb91 344 Gene3D G3DSA:1.10.287.470 113 172 1.2E-10 T 12-10-2018 Acife_2235 225a0ab93669873e46d8e154ff37bb91 344 Gene3D G3DSA:2.40.50.100 186 236 1.1E-5 T 12-10-2018 Acife_2235 225a0ab93669873e46d8e154ff37bb91 344 Gene3D G3DSA:2.40.50.100 45 78 3.0E-11 T 12-10-2018 Acife_2235 225a0ab93669873e46d8e154ff37bb91 344 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 321 4.6E-20 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Acife_2235 225a0ab93669873e46d8e154ff37bb91 344 SUPERFAMILY SSF111369 115 171 6.8E-6 T 12-10-2018 Acife_2277 c06d8a2a25c1124c0cce63950c8b5b00 307 Pfam PF01063 Amino-transferase class IV 36 267 1.1E-53 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Acife_2277 c06d8a2a25c1124c0cce63950c8b5b00 307 Gene3D G3DSA:3.30.470.10 2 129 6.8E-40 T 12-10-2018 Acife_2277 c06d8a2a25c1124c0cce63950c8b5b00 307 Gene3D G3DSA:3.20.10.10 130 295 1.3E-55 T 12-10-2018 Acife_2277 c06d8a2a25c1124c0cce63950c8b5b00 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 2.3E-134 T 12-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Acife_2277 c06d8a2a25c1124c0cce63950c8b5b00 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Acife_2277 c06d8a2a25c1124c0cce63950c8b5b00 307 SUPERFAMILY SSF56752 1 303 4.97E-104 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Acife_1466 0adfa6f2cd370eb8d90fbd2571f5edfe 372 Pfam PF03595 Voltage-dependent anion channel 29 352 4.8E-47 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 Acife_2366 8d19ff719b464aee77d1d2147c8db226 1223 Gene3D G3DSA:3.40.50.300 932 1217 1.0E-22 T 12-10-2018 Acife_2366 8d19ff719b464aee77d1d2147c8db226 1223 Pfam PF13476 AAA domain 6 262 2.0E-20 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain Acife_2366 8d19ff719b464aee77d1d2147c8db226 1223 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1102 1177 1.3E-13 T 12-10-2018 Acife_2366 8d19ff719b464aee77d1d2147c8db226 1223 Gene3D G3DSA:3.40.50.300 1 319 3.9E-44 T 12-10-2018 Acife_2366 8d19ff719b464aee77d1d2147c8db226 1223 SUPERFAMILY SSF52540 1 1214 7.77E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1842 8a5fb801dccc406137b765f3376ed4b5 311 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 81 295 4.5E-28 T 12-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related Acife_1667 833c5fa1ce3daba7678eb57ae1ee777d 101 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 84 3.5E-9 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Acife_1667 833c5fa1ce3daba7678eb57ae1ee777d 101 Gene3D G3DSA:3.10.20.30 1 97 6.7E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_1667 833c5fa1ce3daba7678eb57ae1ee777d 101 SUPERFAMILY SSF54292 2 95 3.33E-20 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Acife_0743 062c5258d5b95b9ab8008cb27716b14c 373 SUPERFAMILY SSF52540 8 243 1.06E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0743 062c5258d5b95b9ab8008cb27716b14c 373 Gene3D G3DSA:3.40.50.300 8 211 1.3E-24 T 12-10-2018 Acife_1298 8bb82a2cabdf4b5ecc137e68b5ccc527 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 46.412 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Acife_1298 8bb82a2cabdf4b5ecc137e68b5ccc527 241 SUPERFAMILY SSF53633 4 236 3.53E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_1298 8bb82a2cabdf4b5ecc137e68b5ccc527 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 236 1.0E-102 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Acife_1298 8bb82a2cabdf4b5ecc137e68b5ccc527 241 Pfam PF00696 Amino acid kinase family 8 216 1.5E-29 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Acife_1298 8bb82a2cabdf4b5ecc137e68b5ccc527 241 PIRSF PIRSF005650 1 241 2.7E-96 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Acife_1298 8bb82a2cabdf4b5ecc137e68b5ccc527 241 Gene3D G3DSA:3.40.1160.10 2 240 3.7E-79 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Acife_1221 ae5c4cf61d5e276b21657f6c388d7f32 230 Gene3D G3DSA:1.20.1050.10 115 227 6.4E-6 T 12-10-2018 Acife_1221 ae5c4cf61d5e276b21657f6c388d7f32 230 Pfam PF04399 Glutaredoxin 2, C terminal domain 110 223 1.1E-9 T 12-10-2018 IPR007494 Glutaredoxin 2, C-terminal Acife_0029 6f886a48ee1692e2ba868dcec4042c9a 375 SUPERFAMILY SSF53335 35 372 1.89E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0029 6f886a48ee1692e2ba868dcec4042c9a 375 Gene3D G3DSA:3.40.50.12710 19 375 1.1E-101 T 12-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 Acife_0029 6f886a48ee1692e2ba868dcec4042c9a 375 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 93 313 5.8E-41 T 12-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 Acife_2285 061abf6329e59a8b8fb3e8040969c491 97 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 6 85 4.7E-6 T 12-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system Acife_2034 393440c793487e08df250d9b3332552c 274 Gene3D G3DSA:1.10.620.20 38 215 2.3E-14 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Acife_2034 393440c793487e08df250d9b3332552c 274 SUPERFAMILY SSF47240 6 190 5.95E-25 T 12-10-2018 IPR009078 Ferritin-like superfamily Acife_0799 680cd4bafa80f79ed6b05ae51932066a 416 Gene3D G3DSA:2.40.50.100 1 99 3.7E-24 T 12-10-2018 Acife_0799 680cd4bafa80f79ed6b05ae51932066a 416 SUPERFAMILY SSF51230 2 95 1.7E-20 T 12-10-2018 IPR011053 Single hybrid motif Acife_0799 680cd4bafa80f79ed6b05ae51932066a 416 Pfam PF00364 Biotin-requiring enzyme 4 72 5.1E-12 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Acife_0799 680cd4bafa80f79ed6b05ae51932066a 416 Gene3D G3DSA:3.30.559.10 200 414 1.5E-44 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Acife_0799 680cd4bafa80f79ed6b05ae51932066a 416 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 217 412 1.3E-37 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Acife_0799 680cd4bafa80f79ed6b05ae51932066a 416 SUPERFAMILY SSF52777 203 414 4.31E-42 T 12-10-2018 Acife_0799 680cd4bafa80f79ed6b05ae51932066a 416 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Acife_0466 648b23d796c613caf99caf44840cda0e 263 Pfam PF04338 Protein of unknown function, DUF481 56 263 4.7E-30 T 12-10-2018 IPR007433 Protein of unknown function DUF481 Acife_0162 2bf10ee256a8720c7b0f02a53c7edf72 245 Pfam PF12686 Protein of unknown function (DUF3800) 11 227 1.7E-25 T 12-10-2018 IPR024524 Protein of unknown function DUF3800 Acife_0273 1bf050213fbe3d91c898234e51bdbb6a 451 Pfam PF00263 Bacterial type II and III secretion system protein 265 420 1.1E-35 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 Acife_0273 1bf050213fbe3d91c898234e51bdbb6a 451 Pfam PF13629 Pilus formation protein N terminal region 33 96 3.6E-14 T 12-10-2018 IPR032789 Pilus formation protein, N-terminal Acife_0273 1bf050213fbe3d91c898234e51bdbb6a 451 PRINTS PR00811 Bacterial general secretion pathway protein D signature 385 403 2.1E-5 T 12-10-2018 IPR001775 GspD/PilQ family Acife_0273 1bf050213fbe3d91c898234e51bdbb6a 451 PRINTS PR00811 Bacterial general secretion pathway protein D signature 408 422 2.1E-5 T 12-10-2018 IPR001775 GspD/PilQ family Acife_0402 655df5e59039f7aceaa07a0139730843 364 Gene3D G3DSA:1.10.150.130 64 174 2.7E-8 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_0402 655df5e59039f7aceaa07a0139730843 364 SUPERFAMILY SSF56349 69 332 6.59E-56 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_0402 655df5e59039f7aceaa07a0139730843 364 Gene3D G3DSA:1.10.443.10 176 350 8.5E-34 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_0402 655df5e59039f7aceaa07a0139730843 364 Pfam PF00589 Phage integrase family 183 328 1.7E-25 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Acife_0994 3b9089e86209c7ee4010c20c33eeb825 337 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 1.8E-28 T 12-10-2018 Acife_0994 3b9089e86209c7ee4010c20c33eeb825 337 PRINTS PR01713 Nucleotide sugar epimerase signature 296 313 1.8E-28 T 12-10-2018 Acife_0994 3b9089e86209c7ee4010c20c33eeb825 337 PRINTS PR01713 Nucleotide sugar epimerase signature 218 233 1.8E-28 T 12-10-2018 Acife_0994 3b9089e86209c7ee4010c20c33eeb825 337 PRINTS PR01713 Nucleotide sugar epimerase signature 31 47 1.8E-28 T 12-10-2018 Acife_0994 3b9089e86209c7ee4010c20c33eeb825 337 SUPERFAMILY SSF51735 1 334 2.31E-91 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0994 3b9089e86209c7ee4010c20c33eeb825 337 Gene3D G3DSA:3.90.25.10 182 329 8.7E-96 T 12-10-2018 Acife_0994 3b9089e86209c7ee4010c20c33eeb825 337 Gene3D G3DSA:3.40.50.720 6 317 8.7E-96 T 12-10-2018 Acife_0994 3b9089e86209c7ee4010c20c33eeb825 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 236 5.3E-59 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Acife_1360 7ee8276b88718969769c982a53b78972 121 Hamap MF_00599 Cell division protein FtsB [ftsB]. 19 107 22.735 T 12-10-2018 IPR023081 Cell division protein FtsB Acife_1360 7ee8276b88718969769c982a53b78972 121 Pfam PF04977 Septum formation initiator 29 105 1.0E-15 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Acife_1994 95215efc8c57a81351b0b720cdedee83 140 SUPERFAMILY SSF55729 1 113 1.89E-6 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_1056 bbbc5c803ca83abca9d4b102a90acbd0 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 229 8.1E-19 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Acife_1056 bbbc5c803ca83abca9d4b102a90acbd0 320 Gene3D G3DSA:3.40.50.720 1 310 2.3E-45 T 12-10-2018 Acife_1056 bbbc5c803ca83abca9d4b102a90acbd0 320 SUPERFAMILY SSF51735 1 307 6.24E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0980 2856812e8c98d4439d5608c21d5728cb 194 Gene3D G3DSA:3.40.50.150 11 185 5.1E-14 T 12-10-2018 Acife_0980 2856812e8c98d4439d5608c21d5728cb 194 SUPERFAMILY SSF53335 13 158 1.2E-18 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0980 2856812e8c98d4439d5608c21d5728cb 194 Pfam PF13649 Methyltransferase domain 50 138 3.6E-6 T 12-10-2018 Acife_1208 3eaafcee91be3e80c27d2acc744725ae 358 SUPERFAMILY SSF51395 4 351 2.48E-116 T 12-10-2018 Acife_1208 3eaafcee91be3e80c27d2acc744725ae 358 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 340 2.6E-67 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Acife_1208 3eaafcee91be3e80c27d2acc744725ae 358 Gene3D G3DSA:3.20.20.70 3 355 2.5E-124 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_2799 93ff2479493fc4d16ef78570c98151f3 238 Gene3D G3DSA:3.20.20.370 2 226 9.4E-58 T 12-10-2018 Acife_2799 93ff2479493fc4d16ef78570c98151f3 238 Pfam PF01522 Polysaccharide deacetylase 57 194 1.2E-28 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Acife_2799 93ff2479493fc4d16ef78570c98151f3 238 SUPERFAMILY SSF88713 21 211 2.42E-37 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Acife_1284 92b7d0e98d2b686e27e2dd80e215b048 182 Gene3D G3DSA:3.30.1050.10 42 175 4.8E-12 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Acife_1284 92b7d0e98d2b686e27e2dd80e215b048 182 SUPERFAMILY SSF55718 38 178 6.47E-23 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Acife_0826 acd32ce86a7d878e5d8e9589a6b4e791 126 Gene3D G3DSA:1.10.10.10 9 119 2.0E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0826 acd32ce86a7d878e5d8e9589a6b4e791 126 SMART SM00418 42 120 4.2E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_0826 acd32ce86a7d878e5d8e9589a6b4e791 126 SUPERFAMILY SSF46785 32 114 3.01E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0826 acd32ce86a7d878e5d8e9589a6b4e791 126 Pfam PF01022 Bacterial regulatory protein, arsR family 51 91 5.3E-15 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_0826 acd32ce86a7d878e5d8e9589a6b4e791 126 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 1.9E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_0826 acd32ce86a7d878e5d8e9589a6b4e791 126 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 1.9E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_0826 acd32ce86a7d878e5d8e9589a6b4e791 126 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 91 106 1.9E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_0826 acd32ce86a7d878e5d8e9589a6b4e791 126 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 74 1.9E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_0826 acd32ce86a7d878e5d8e9589a6b4e791 126 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 65 83 - T 12-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Acife_0616 fbf4bdabb8cd2a80b1a554e1168c259b 262 SUPERFAMILY SSF51735 10 243 4.47E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0616 fbf4bdabb8cd2a80b1a554e1168c259b 262 Gene3D G3DSA:3.40.50.720 2 246 2.8E-60 T 12-10-2018 Acife_0616 fbf4bdabb8cd2a80b1a554e1168c259b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 8.7E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0616 fbf4bdabb8cd2a80b1a554e1168c259b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 8.7E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0616 fbf4bdabb8cd2a80b1a554e1168c259b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 8.7E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0616 fbf4bdabb8cd2a80b1a554e1168c259b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 8.7E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0616 fbf4bdabb8cd2a80b1a554e1168c259b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 8.7E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0616 fbf4bdabb8cd2a80b1a554e1168c259b 262 Pfam PF00106 short chain dehydrogenase 15 206 1.9E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Acife_0616 fbf4bdabb8cd2a80b1a554e1168c259b 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Acife_1610 fc73b8da8418c8e0bce4da0994fe38fd 159 Gene3D G3DSA:3.40.30.10 5 157 2.0E-44 T 12-10-2018 Acife_1610 fc73b8da8418c8e0bce4da0994fe38fd 159 SUPERFAMILY SSF52833 6 158 3.8E-48 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1610 fc73b8da8418c8e0bce4da0994fe38fd 159 PIRSF PIRSF000239 1 158 1.4E-30 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Acife_1610 fc73b8da8418c8e0bce4da0994fe38fd 159 Pfam PF00578 AhpC/TSA family 8 137 4.1E-36 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Acife_2419 e16954e31e1204f396f7ad39bebc8745 473 SUPERFAMILY SSF56954 6 455 1.57E-73 T 12-10-2018 Acife_2419 e16954e31e1204f396f7ad39bebc8745 473 Gene3D G3DSA:1.20.1600.10 20 458 1.1E-71 T 12-10-2018 Acife_2419 e16954e31e1204f396f7ad39bebc8745 473 Pfam PF02321 Outer membrane efflux protein 277 452 2.6E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_2419 e16954e31e1204f396f7ad39bebc8745 473 Pfam PF02321 Outer membrane efflux protein 31 249 2.6E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_1673 64669ee5e14fa131029b96abb423ef42 129 Pfam PF01152 Bacterial-like globin 9 127 1.9E-35 T 12-10-2018 IPR001486 Truncated hemoglobin GO:0019825 Acife_1673 64669ee5e14fa131029b96abb423ef42 129 SUPERFAMILY SSF46458 7 128 2.67E-36 T 12-10-2018 IPR009050 Globin-like superfamily Acife_1673 64669ee5e14fa131029b96abb423ef42 129 Gene3D G3DSA:1.10.490.10 1 129 8.0E-44 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Acife_3259 08cac007a7c26bd44c9e00f49f1a20e4 109 Gene3D G3DSA:1.10.150.280 18 93 1.5E-13 T 12-10-2018 Acife_3259 08cac007a7c26bd44c9e00f49f1a20e4 109 SUPERFAMILY SSF47781 14 90 3.22E-17 T 12-10-2018 IPR010994 RuvA domain 2-like Acife_3259 08cac007a7c26bd44c9e00f49f1a20e4 109 Pfam PF12836 Helix-hairpin-helix motif 30 83 1.8E-11 T 12-10-2018 Acife_0664 557053cb78f9545609f539501ae0056f 336 Gene3D G3DSA:3.40.50.1580 50 296 5.4E-32 T 12-10-2018 Acife_0664 557053cb78f9545609f539501ae0056f 336 SUPERFAMILY SSF53167 42 264 2.61E-13 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Acife_0664 557053cb78f9545609f539501ae0056f 336 Pfam PF01048 Phosphorylase superfamily 49 142 3.5E-7 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Acife_0676 ef9ce61401dc4754f1618f376d61cff7 111 Gene3D G3DSA:2.30.30.110 14 110 1.4E-15 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Acife_0676 ef9ce61401dc4754f1618f376d61cff7 111 SUPERFAMILY SSF50118 5 109 9.81E-22 T 12-10-2018 Acife_0676 ef9ce61401dc4754f1618f376d61cff7 111 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 106 4.0E-16 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Acife_1511 6d05f2e2adaf35eccfd0071cfa066fc0 156 PRINTS PR01243 Nucleoside diphosphate kinase signature 106 122 2.1E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Acife_1511 6d05f2e2adaf35eccfd0071cfa066fc0 156 PRINTS PR01243 Nucleoside diphosphate kinase signature 65 84 2.1E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Acife_1511 6d05f2e2adaf35eccfd0071cfa066fc0 156 PRINTS PR01243 Nucleoside diphosphate kinase signature 129 148 2.1E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Acife_1511 6d05f2e2adaf35eccfd0071cfa066fc0 156 PRINTS PR01243 Nucleoside diphosphate kinase signature 21 43 2.1E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Acife_1511 6d05f2e2adaf35eccfd0071cfa066fc0 156 PRINTS PR01243 Nucleoside diphosphate kinase signature 85 102 2.1E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Acife_1511 6d05f2e2adaf35eccfd0071cfa066fc0 156 SUPERFAMILY SSF54919 16 155 4.84E-56 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Acife_1511 6d05f2e2adaf35eccfd0071cfa066fc0 156 Gene3D G3DSA:3.30.70.141 13 156 1.5E-56 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Acife_1511 6d05f2e2adaf35eccfd0071cfa066fc0 156 Pfam PF00334 Nucleoside diphosphate kinase 19 153 2.0E-53 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Acife_1511 6d05f2e2adaf35eccfd0071cfa066fc0 156 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 18 153 34.047 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Acife_1511 6d05f2e2adaf35eccfd0071cfa066fc0 156 SMART SM00562 18 155 3.1E-81 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Acife_1115 3302d5018cb312accac49b03b9b83f31 455 SUPERFAMILY SSF51984 1 88 1.44E-21 T 12-10-2018 Acife_1115 3302d5018cb312accac49b03b9b83f31 455 Pfam PF01225 Mur ligase family, catalytic domain 2 97 4.6E-17 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Acife_1115 3302d5018cb312accac49b03b9b83f31 455 Pfam PF08245 Mur ligase middle domain 108 291 2.2E-19 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Acife_1115 3302d5018cb312accac49b03b9b83f31 455 SUPERFAMILY SSF53244 310 446 1.57E-34 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_1115 3302d5018cb312accac49b03b9b83f31 455 Gene3D G3DSA:3.40.1190.10 91 313 8.3E-55 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_1115 3302d5018cb312accac49b03b9b83f31 455 Gene3D G3DSA:3.90.190.20 314 448 1.7E-25 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Acife_1115 3302d5018cb312accac49b03b9b83f31 455 SUPERFAMILY SSF53623 97 309 4.19E-49 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Acife_1115 3302d5018cb312accac49b03b9b83f31 455 Gene3D G3DSA:3.40.50.720 1 90 5.3E-33 T 12-10-2018 Acife_1115 3302d5018cb312accac49b03b9b83f31 455 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 446 5.7E-198 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Acife_1115 3302d5018cb312accac49b03b9b83f31 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 386 3.7E-9 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Acife_1115 3302d5018cb312accac49b03b9b83f31 455 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 447 57.198 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Acife_3048 3c5ce3741fc5882c359bb7272e1d4ba0 176 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 11 160 5.9E-31 T 12-10-2018 IPR014118 Type IV conjugative transfer system protein TraV Acife_3048 3c5ce3741fc5882c359bb7272e1d4ba0 176 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 25 160 5.8E-20 T 12-10-2018 IPR014118 Type IV conjugative transfer system protein TraV Acife_0351 558e6c4c26cdf4e1113d70b0b6164f56 132 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 11 89 3.3E-14 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Acife_0351 558e6c4c26cdf4e1113d70b0b6164f56 132 Gene3D G3DSA:1.10.150.130 9 93 1.8E-13 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_1508 7d344ed4b92eceec5c943dc3e550ebfd 161 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 6 130 1.2E-39 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Acife_1508 7d344ed4b92eceec5c943dc3e550ebfd 161 SUPERFAMILY SSF52540 19 147 9.53E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1508 7d344ed4b92eceec5c943dc3e550ebfd 161 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 123 2.5E-34 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Acife_1508 7d344ed4b92eceec5c943dc3e550ebfd 161 Gene3D G3DSA:3.40.50.300 1 147 2.1E-37 T 12-10-2018 Acife_0446 309e1c0df40984cd4bf64c8283f74e22 357 SUPERFAMILY SSF103190 35 130 1.8E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Acife_0446 309e1c0df40984cd4bf64c8283f74e22 357 Gene3D G3DSA:3.30.450.20 5 189 2.2E-6 T 12-10-2018 Acife_1782 b5c2e1781108cc781ea739f32a853812 669 Pfam PF01841 Transglutaminase-like superfamily 381 483 9.1E-21 T 12-10-2018 IPR002931 Transglutaminase-like Acife_1782 b5c2e1781108cc781ea739f32a853812 669 Pfam PF11992 Domain of unknown function (DUF3488) 18 341 1.5E-42 T 12-10-2018 IPR021878 Protein of unknown function DUF3488 Acife_1782 b5c2e1781108cc781ea739f32a853812 669 Gene3D G3DSA:3.10.620.30 348 505 1.1E-17 T 12-10-2018 Acife_1782 b5c2e1781108cc781ea739f32a853812 669 SUPERFAMILY SSF54001 282 542 2.8E-41 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Acife_1782 b5c2e1781108cc781ea739f32a853812 669 SMART SM00460 414 485 4.2E-21 T 12-10-2018 IPR002931 Transglutaminase-like Acife_1643 dc499ebc0bd1e33bb78498f362924e88 138 TIGRFAM TIGR02663 nifX: nitrogen fixation protein NifX 1 119 3.3E-55 T 12-10-2018 IPR013480 Nitrogen fixation protein NifX GO:0009399|GO:0051188|GO:0051540 Acife_1643 dc499ebc0bd1e33bb78498f362924e88 138 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 11 104 3.0E-18 T 12-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Acife_1643 dc499ebc0bd1e33bb78498f362924e88 138 Gene3D G3DSA:3.30.420.130 1 119 1.4E-32 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Acife_1643 dc499ebc0bd1e33bb78498f362924e88 138 SUPERFAMILY SSF53146 1 119 3.01E-34 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Acife_0055 92bcce9e1582ed061f82f629bdfebc1e 421 Pfam PF01566 Natural resistance-associated macrophage protein 43 381 5.1E-67 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Acife_1277 384907a486cc334a028d932261a5bbe4 345 TIGRFAM TIGR03476 HpnL: putative membrane protein 15 326 7.2E-113 T 12-10-2018 Acife_1277 384907a486cc334a028d932261a5bbe4 345 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 20 316 4.0E-27 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Acife_1827 a1dbd16644c1f998dc3cbf7930f75185 296 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 81 242 5.9E-36 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Acife_1827 a1dbd16644c1f998dc3cbf7930f75185 296 SUPERFAMILY SSF52540 57 281 1.19E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1827 a1dbd16644c1f998dc3cbf7930f75185 296 PIRSF PIRSF005624 44 277 1.2E-96 T 12-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Acife_1827 a1dbd16644c1f998dc3cbf7930f75185 296 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 54 261 2.8E-89 T 12-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 Acife_1827 a1dbd16644c1f998dc3cbf7930f75185 296 Gene3D G3DSA:3.40.50.300 61 271 9.2E-63 T 12-10-2018 Acife_1243 2107ea4eaebdf65b2e3fbf68589f3100 165 Gene3D G3DSA:3.40.50.12280 28 165 6.4E-47 T 12-10-2018 Acife_1243 2107ea4eaebdf65b2e3fbf68589f3100 165 SUPERFAMILY SSF56770 33 159 2.88E-47 T 12-10-2018 Acife_1243 2107ea4eaebdf65b2e3fbf68589f3100 165 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 47 157 1.2E-25 T 12-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_3100 a8e71b3e3527f394cc02dc03b232766a 239 SUPERFAMILY SSF102405 18 218 1.83E-58 T 12-10-2018 Acife_3100 a8e71b3e3527f394cc02dc03b232766a 239 Gene3D G3DSA:3.40.50.450 22 221 1.6E-63 T 12-10-2018 Acife_3100 a8e71b3e3527f394cc02dc03b232766a 239 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 45 217 1.3E-43 T 12-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Acife_3100 a8e71b3e3527f394cc02dc03b232766a 239 Pfam PF03641 Possible lysine decarboxylase 87 216 3.6E-33 T 12-10-2018 IPR031100 LOG family Acife_2400 b1bf7750b28b2d61ced76d1231cb92d1 141 SUPERFAMILY SSF88723 1 137 2.47E-27 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_2400 b1bf7750b28b2d61ced76d1231cb92d1 141 Gene3D G3DSA:3.40.50.1010 1 139 1.6E-33 T 12-10-2018 Acife_2400 b1bf7750b28b2d61ced76d1231cb92d1 141 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 136 10.694 T 12-10-2018 IPR022907 VapC family GO:0004540 Acife_2400 b1bf7750b28b2d61ced76d1231cb92d1 141 Pfam PF01850 PIN domain 2 123 2.1E-11 T 12-10-2018 IPR002716 PIN domain Acife_3251 9eb0acb4758384f76887a8c5ad18532b 298 Gene3D G3DSA:3.90.25.10 169 289 1.6E-94 T 12-10-2018 Acife_3251 9eb0acb4758384f76887a8c5ad18532b 298 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 12 294 4.4E-94 T 12-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Acife_3251 9eb0acb4758384f76887a8c5ad18532b 298 Gene3D G3DSA:3.40.50.720 13 282 1.6E-94 T 12-10-2018 Acife_3251 9eb0acb4758384f76887a8c5ad18532b 298 Pfam PF04321 RmlD substrate binding domain 12 294 2.5E-90 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Acife_3251 9eb0acb4758384f76887a8c5ad18532b 298 SUPERFAMILY SSF51735 12 294 1.66E-88 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_2403 703410b2363514e9367794acad73252d 107 Gene3D G3DSA:1.10.10.10 29 92 4.3E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2403 703410b2363514e9367794acad73252d 107 SUPERFAMILY SSF46785 23 89 5.39E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0323 3c49afded0b7fca1716145dfcd011cfc 172 Pfam PF03734 L,D-transpeptidase catalytic domain 5 159 1.0E-9 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Acife_0323 3c49afded0b7fca1716145dfcd011cfc 172 Gene3D G3DSA:2.40.440.10 1 170 3.7E-21 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Acife_0323 3c49afded0b7fca1716145dfcd011cfc 172 SUPERFAMILY SSF141523 3 159 5.89E-19 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Acife_3114 bf0daa37b59e5ba8846e65c852b34563 181 Gene3D G3DSA:3.40.50.360 1 181 2.2E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Acife_3114 bf0daa37b59e5ba8846e65c852b34563 181 SUPERFAMILY SSF52218 1 163 1.14E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Acife_3114 bf0daa37b59e5ba8846e65c852b34563 181 Pfam PF03358 NADPH-dependent FMN reductase 1 136 5.0E-28 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Acife_2339 529decaeabe231395b52a25235a0324d 259 SMART SM00849 35 243 1.9E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_2339 529decaeabe231395b52a25235a0324d 259 Pfam PF00753 Metallo-beta-lactamase superfamily 36 231 2.9E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase Acife_2339 529decaeabe231395b52a25235a0324d 259 SUPERFAMILY SSF56281 29 247 1.1E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_2339 529decaeabe231395b52a25235a0324d 259 Gene3D G3DSA:3.60.15.10 5 259 5.6E-64 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_3051 219e69333312bd7fddcee3d6cb67330e 202 Pfam PF05309 TraE protein 5 180 2.5E-31 T 12-10-2018 IPR007973 Pilus assembly TraE GO:0000746 Acife_3051 219e69333312bd7fddcee3d6cb67330e 202 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 6 179 2.5E-36 T 12-10-2018 IPR007973 Pilus assembly TraE GO:0000746 Acife_3260 d5bbf2fcf3980ec266e59e238182c51d 131 SUPERFAMILY SSF54197 3 130 1.22E-31 T 12-10-2018 IPR036265 HIT-like superfamily Acife_3260 d5bbf2fcf3980ec266e59e238182c51d 131 Gene3D G3DSA:3.30.428.10 1 131 4.1E-33 T 12-10-2018 IPR036265 HIT-like superfamily Acife_3260 d5bbf2fcf3980ec266e59e238182c51d 131 Pfam PF01230 HIT domain 11 99 3.7E-17 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Acife_3260 d5bbf2fcf3980ec266e59e238182c51d 131 PRINTS PR00332 Histidine triad family signature 87 97 1.2E-15 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Acife_3260 d5bbf2fcf3980ec266e59e238182c51d 131 PRINTS PR00332 Histidine triad family signature 4 20 1.2E-15 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Acife_3260 d5bbf2fcf3980ec266e59e238182c51d 131 PRINTS PR00332 Histidine triad family signature 25 43 1.2E-15 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Acife_2250 f7a50d0146e55c5c6f40efa2fd1be98a 306 Pfam PF14338 Mrr N-terminal domain 7 91 3.3E-27 T 12-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain Acife_2250 f7a50d0146e55c5c6f40efa2fd1be98a 306 Pfam PF04471 Restriction endonuclease 160 280 1.6E-34 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 Acife_2250 f7a50d0146e55c5c6f40efa2fd1be98a 306 SUPERFAMILY SSF52980 164 284 5.15E-15 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Acife_2325 ba31a0fd9288c053346d2741e6828443 839 SUPERFAMILY SSF53335 259 499 2.0E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2325 ba31a0fd9288c053346d2741e6828443 839 Pfam PF02384 N-6 DNA Methylase 268 416 1.2E-5 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Acife_2325 ba31a0fd9288c053346d2741e6828443 839 Gene3D G3DSA:3.40.50.150 268 544 1.7E-25 T 12-10-2018 Acife_2121 5dfe33668aa6c01b318aa166904647ba 229 Gene3D G3DSA:2.60.120.10 11 135 6.0E-82 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_2121 5dfe33668aa6c01b318aa166904647ba 229 Gene3D G3DSA:2.60.120.10 7 229 6.0E-82 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_2121 5dfe33668aa6c01b318aa166904647ba 229 PIRSF PIRSF006232 1 227 5.7E-48 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Acife_2121 5dfe33668aa6c01b318aa166904647ba 229 Pfam PF02678 Pirin 11 119 1.0E-35 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Acife_2121 5dfe33668aa6c01b318aa166904647ba 229 SUPERFAMILY SSF51182 1 228 8.48E-69 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Acife_3128 8b8e50f026edd6caf7be3d046101ca82 562 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 111 2.4E-15 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_3128 8b8e50f026edd6caf7be3d046101ca82 562 Pfam PF00361 Proton-conducting membrane transporter 124 350 8.4E-45 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_3128 8b8e50f026edd6caf7be3d046101ca82 562 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 3.1E-27 T 12-10-2018 Acife_3128 8b8e50f026edd6caf7be3d046101ca82 562 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 3.1E-27 T 12-10-2018 Acife_3128 8b8e50f026edd6caf7be3d046101ca82 562 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 3.1E-27 T 12-10-2018 Acife_3128 8b8e50f026edd6caf7be3d046101ca82 562 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 148 169 3.1E-27 T 12-10-2018 Acife_3128 8b8e50f026edd6caf7be3d046101ca82 562 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 101 121 3.1E-27 T 12-10-2018 Acife_3128 8b8e50f026edd6caf7be3d046101ca82 562 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 3.1E-27 T 12-10-2018 Acife_0567 2898cdaedb651e5632d03d0f2cdb2505 396 Pfam PF07396 Phosphate-selective porin O and P 52 362 7.3E-6 T 12-10-2018 IPR010870 Phosphate-selective porin O/P Acife_0567 2898cdaedb651e5632d03d0f2cdb2505 396 Gene3D G3DSA:2.40.160.10 29 310 1.0E-9 T 12-10-2018 IPR023614 Porin domain superfamily Acife_0567 2898cdaedb651e5632d03d0f2cdb2505 396 SUPERFAMILY SSF56935 58 355 5.76E-6 T 12-10-2018 Acife_1790 a5b6ea9fcd929e8931bbcd2c8cdbc683 161 SUPERFAMILY SSF54690 3 139 6.02E-44 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Acife_1790 a5b6ea9fcd929e8931bbcd2c8cdbc683 161 Gene3D G3DSA:3.90.1170.40 1 141 2.5E-41 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Acife_1790 a5b6ea9fcd929e8931bbcd2c8cdbc683 161 Pfam PF02391 MoaE protein 24 119 6.5E-31 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Acife_1803 60701788470dbee46263795bdd628028 227 Gene3D G3DSA:3.40.50.1820 9 222 1.1E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_1803 60701788470dbee46263795bdd628028 227 SUPERFAMILY SSF53474 15 215 4.56E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_1803 60701788470dbee46263795bdd628028 227 Pfam PF02230 Phospholipase/Carboxylesterase 17 216 7.0E-44 T 12-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 Acife_2238 553a3aa581d76e25b8d9a82184f474fc 369 Pfam PF12698 ABC-2 family transporter protein 27 360 4.3E-37 T 12-10-2018 Acife_0857 6e0a3c069fc0389f49ac72171d516e07 187 Pfam PF13511 Domain of unknown function (DUF4124) 29 82 2.1E-17 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 Acife_2842 7fd4a1284620c0beec5e88598ca4313d 432 Gene3D G3DSA:1.20.1530.20 21 428 1.3E-92 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Acife_2842 7fd4a1284620c0beec5e88598ca4313d 432 Pfam PF00999 Sodium/hydrogen exchanger family 27 417 1.6E-53 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 163 180 - T 12-10-2018 IPR028871 Blue (type 1) copper protein, binding site Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 Pfam PF06525 Sulfocyanin (SoxE) domain 86 186 5.1E-6 T 12-10-2018 IPR010532 Sulfocyanin GO:0005507|GO:0055114 Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 Gene3D G3DSA:2.60.40.420 34 187 9.8E-56 T 12-10-2018 IPR008972 Cupredoxin Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 SUPERFAMILY SSF49503 39 186 2.06E-23 T 12-10-2018 IPR008972 Cupredoxin Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 PRINTS PR00158 Rusticyanin signature 48 68 1.7E-82 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 PRINTS PR00158 Rusticyanin signature 110 129 1.7E-82 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 PRINTS PR00158 Rusticyanin signature 70 87 1.7E-82 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 PRINTS PR00158 Rusticyanin signature 89 108 1.7E-82 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 PRINTS PR00158 Rusticyanin signature 136 154 1.7E-82 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 PRINTS PR00158 Rusticyanin signature 157 179 1.7E-82 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 ProSitePatterns PS00079 Multicopper oxidases signature 1. 164 184 - T 12-10-2018 IPR033138 Multicopper oxidases, conserved site Acife_1864 4e3edf92d5b78a88083f25336eced91e 187 TIGRFAM TIGR03095 rusti_cyanin: rusticyanin 46 187 2.5E-68 T 12-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 Acife_1077 7b4d65da72c4e03def5442d752182761 583 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 577 33.105 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Acife_1077 7b4d65da72c4e03def5442d752182761 583 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 4 576 7.2E-205 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Acife_1077 7b4d65da72c4e03def5442d752182761 583 Pfam PF03814 Potassium-transporting ATPase A subunit 10 575 3.8E-224 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Acife_1077 7b4d65da72c4e03def5442d752182761 583 PIRSF PIRSF001294 1 578 1.9E-218 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Acife_1198 61d5e76aa14056c9f6ce716dee9cb72b 113 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 27 82 1.5E-6 T 12-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system Acife_0469 7699fa92cf2ec3665ab72cb7116d8b46 114 Pfam PF11604 Copper binding periplasmic protein CusF 44 111 2.4E-21 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF Acife_0469 7699fa92cf2ec3665ab72cb7116d8b46 114 Gene3D G3DSA:2.40.50.320 38 112 2.0E-18 T 12-10-2018 Acife_2446 1db2edc4f0f3681a1951ef99274cc2d8 110 SUPERFAMILY SSF46785 2 71 1.58E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2446 1db2edc4f0f3681a1951ef99274cc2d8 110 Pfam PF09012 FeoC like transcriptional regulator 4 72 1.1E-10 T 12-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC Acife_2446 1db2edc4f0f3681a1951ef99274cc2d8 110 Gene3D G3DSA:1.10.10.10 1 82 3.8E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0837 b3ca033b1316b5627914f73853423e0c 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 91 2.2E-21 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Acife_0837 b3ca033b1316b5627914f73853423e0c 96 PIRSF PIRSF029218 1 96 1.4E-32 T 12-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 Acife_0837 b3ca033b1316b5627914f73853423e0c 96 Gene3D G3DSA:3.30.2310.20 1 96 2.4E-33 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_1171 635bb5f31facfb785b8040c7556577ef 341 SUPERFAMILY SSF53448 14 234 3.16E-51 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1171 635bb5f31facfb785b8040c7556577ef 341 Gene3D G3DSA:3.90.550.10 3 249 7.9E-55 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1171 635bb5f31facfb785b8040c7556577ef 341 Pfam PF00535 Glycosyl transferase family 2 17 119 9.1E-26 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_1139 df13bd1f2c440962d7632d7680044ca1 88 SMART SM00966 8 55 0.0045 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_1139 df13bd1f2c440962d7632d7680044ca1 88 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 42 1.3E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_1139 df13bd1f2c440962d7632d7680044ca1 88 Gene3D G3DSA:2.10.260.10 1 47 7.6E-8 T 12-10-2018 Acife_1139 df13bd1f2c440962d7632d7680044ca1 88 SUPERFAMILY SSF89447 4 43 2.75E-8 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_2342 ca7d9d65fb692d87386366070e917d76 127 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 7.3E-58 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Acife_2342 ca7d9d65fb692d87386366070e917d76 127 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Acife_2342 ca7d9d65fb692d87386366070e917d76 127 Gene3D G3DSA:3.10.180.10 1 127 1.3E-44 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_2342 ca7d9d65fb692d87386366070e917d76 127 SUPERFAMILY SSF54593 1 126 1.75E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Acife_2342 ca7d9d65fb692d87386366070e917d76 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 2.8E-17 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Acife_2342 ca7d9d65fb692d87386366070e917d76 127 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Acife_0810 907df04c1c8a976be108217142395687 438 Gene3D G3DSA:1.20.1600.10 39 435 2.7E-58 T 12-10-2018 Acife_0810 907df04c1c8a976be108217142395687 438 Pfam PF02321 Outer membrane efflux protein 259 431 2.9E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_0810 907df04c1c8a976be108217142395687 438 Pfam PF02321 Outer membrane efflux protein 50 232 2.1E-10 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_0810 907df04c1c8a976be108217142395687 438 SUPERFAMILY SSF56954 29 431 4.19E-64 T 12-10-2018 Acife_1484 50a5b953a3db63f785e88e85116e4860 398 Gene3D G3DSA:1.20.1250.20 214 394 5.3E-9 T 12-10-2018 Acife_1484 50a5b953a3db63f785e88e85116e4860 398 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 25 385 6.0E-59 T 12-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB Acife_1484 50a5b953a3db63f785e88e85116e4860 398 Gene3D G3DSA:1.20.1250.20 10 198 9.1E-17 T 12-10-2018 Acife_1484 50a5b953a3db63f785e88e85116e4860 398 SUPERFAMILY SSF103473 17 393 1.83E-35 T 12-10-2018 IPR036259 MFS transporter superfamily Acife_2962 01ab0f13f4116ebba9266717159c702b 205 Pfam PF13274 Protein of unknown function (DUF4065) 43 157 2.9E-18 T 12-10-2018 IPR025272 Domain of unknown function DUF4065 Acife_1301 24c73365f4282967de3cf15b09a2681e 270 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 224 250 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Acife_1301 24c73365f4282967de3cf15b09a2681e 270 Pfam PF01148 Cytidylyltransferase family 4 263 5.8E-53 T 12-10-2018 Acife_0569 8f402db7ac820f94bf131345f64c81f2 204 Pfam PF08241 Methyltransferase domain 47 133 3.9E-18 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Acife_0569 8f402db7ac820f94bf131345f64c81f2 204 Gene3D G3DSA:3.40.50.150 16 173 7.5E-28 T 12-10-2018 Acife_0569 8f402db7ac820f94bf131345f64c81f2 204 SUPERFAMILY SSF53335 8 164 1.54E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0450 2835cd570e6e6b82026dc3ca7d012ba9 163 Gene3D G3DSA:1.10.10.10 19 163 1.3E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0450 2835cd570e6e6b82026dc3ca7d012ba9 163 SMART SM00347 47 147 1.8E-24 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Acife_0450 2835cd570e6e6b82026dc3ca7d012ba9 163 SUPERFAMILY SSF46785 14 162 1.32E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0450 2835cd570e6e6b82026dc3ca7d012ba9 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 8.7E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Acife_0450 2835cd570e6e6b82026dc3ca7d012ba9 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 8.7E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Acife_0450 2835cd570e6e6b82026dc3ca7d012ba9 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 8.7E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Acife_0450 2835cd570e6e6b82026dc3ca7d012ba9 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 8.7E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Acife_0450 2835cd570e6e6b82026dc3ca7d012ba9 163 Pfam PF01047 MarR family 54 111 5.8E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Acife_1096 c9146bdb97d6451df3ef9222bb566ff6 262 SUPERFAMILY SSF75217 5 174 1.18E-38 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Acife_1096 c9146bdb97d6451df3ef9222bb566ff6 262 Gene3D G3DSA:3.40.1280.10 13 176 5.7E-62 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Acife_1096 c9146bdb97d6451df3ef9222bb566ff6 262 PIRSF PIRSF004808 13 256 2.3E-73 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Acife_1096 c9146bdb97d6451df3ef9222bb566ff6 262 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 16 249 9.1E-70 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Acife_1096 c9146bdb97d6451df3ef9222bb566ff6 262 Pfam PF00588 SpoU rRNA Methylase family 18 167 4.0E-36 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Acife_1096 c9146bdb97d6451df3ef9222bb566ff6 262 Gene3D G3DSA:1.10.8.590 181 260 4.6E-26 T 12-10-2018 Acife_1505 a1fc07860ea6fdbd3e18a220316c68f8 283 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 213 223 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site Acife_1505 a1fc07860ea6fdbd3e18a220316c68f8 283 Pfam PF01256 Carbohydrate kinase 34 270 1.5E-41 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Acife_1505 a1fc07860ea6fdbd3e18a220316c68f8 283 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 8 278 19.903 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Acife_1505 a1fc07860ea6fdbd3e18a220316c68f8 283 Gene3D G3DSA:3.40.1190.20 11 282 2.9E-71 T 12-10-2018 IPR029056 Ribokinase-like Acife_1505 a1fc07860ea6fdbd3e18a220316c68f8 283 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 9 272 3.8E-50 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Acife_1505 a1fc07860ea6fdbd3e18a220316c68f8 283 SUPERFAMILY SSF53613 12 275 7.55E-62 T 12-10-2018 IPR029056 Ribokinase-like Acife_2449 9e0c8c28cd51cd37d5a3d2de08e439a7 215 Pfam PF09335 SNARE associated Golgi protein 49 171 1.1E-19 T 12-10-2018 IPR032816 SNARE associated Golgi protein Acife_2988 e9ee566fcb79e36f9827e406e689d5f6 136 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 115 1.1E-39 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Acife_2988 e9ee566fcb79e36f9827e406e689d5f6 136 Gene3D G3DSA:2.40.50.140 2 130 5.5E-39 T 12-10-2018 Acife_2988 e9ee566fcb79e36f9827e406e689d5f6 136 Hamap MF_00984 Single-stranded DNA-binding protein. 4 111 29.483 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Acife_2988 e9ee566fcb79e36f9827e406e689d5f6 136 PIRSF PIRSF002070 1 133 2.6E-36 T 12-10-2018 Acife_2988 e9ee566fcb79e36f9827e406e689d5f6 136 SUPERFAMILY SSF50249 3 136 1.54E-47 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Acife_2988 e9ee566fcb79e36f9827e406e689d5f6 136 Pfam PF00436 Single-strand binding protein family 4 105 6.2E-33 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Acife_2102 465562cb44b8342b2b41bb4f826fb82b 56 SUPERFAMILY SSF69047 1 55 1.01E-12 T 12-10-2018 IPR036629 YjbJ superfamily Acife_2102 465562cb44b8342b2b41bb4f826fb82b 56 Gene3D G3DSA:1.10.1470.10 1 56 4.4E-10 T 12-10-2018 IPR036629 YjbJ superfamily Acife_2102 465562cb44b8342b2b41bb4f826fb82b 56 Pfam PF05532 CsbD-like 4 55 4.3E-12 T 12-10-2018 IPR008462 CsbD-like domain Acife_3244 d9c768ff388cbbb89d5902fa6114c291 94 Pfam PF08681 Protein of unknown function (DUF1778) 11 89 1.1E-18 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Acife_3244 d9c768ff388cbbb89d5902fa6114c291 94 SUPERFAMILY SSF47598 8 85 1.33E-15 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_3244 d9c768ff388cbbb89d5902fa6114c291 94 Gene3D G3DSA:1.20.5.780 6 92 7.0E-24 T 12-10-2018 Acife_1487 a2dd1f2ccf2dc3bbc6fd865dfa91066b 159 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 142 6.4E-13 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase Acife_1487 a2dd1f2ccf2dc3bbc6fd865dfa91066b 159 SUPERFAMILY SSF55961 1 142 6.36E-25 T 12-10-2018 Acife_1487 a2dd1f2ccf2dc3bbc6fd865dfa91066b 159 Gene3D G3DSA:3.30.530.20 1 143 1.4E-25 T 12-10-2018 IPR023393 START-like domain superfamily Acife_2727 2b050f57ec03493d3e9753f89d009053 117 Pfam PF06305 Lipopolysaccharide assembly protein A domain 19 81 2.6E-12 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 Acife_1391 cffb1f359b598115ea0dcc00fb54ae63 338 Gene3D G3DSA:3.20.20.70 76 333 1.3E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_1391 cffb1f359b598115ea0dcc00fb54ae63 338 Gene3D G3DSA:3.30.70.1140 1 75 2.1E-27 T 12-10-2018 Acife_1391 cffb1f359b598115ea0dcc00fb54ae63 338 Pfam PF00793 DAHP synthetase I family 88 324 1.1E-69 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Acife_1391 cffb1f359b598115ea0dcc00fb54ae63 338 SUPERFAMILY SSF51569 1 336 9.16E-113 T 12-10-2018 Acife_1391 cffb1f359b598115ea0dcc00fb54ae63 338 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 71 329 6.7E-110 T 12-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Acife_0195 07c3c04eaf0ee19c14de4fd044047aeb 512 Pfam PF02646 RmuC family 188 477 1.6E-96 T 12-10-2018 IPR003798 DNA recombination RmuC Acife_0707 af07005fbaf28d90168a951e70fc29af 284 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 9 280 5.9E-124 T 12-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 Acife_0707 af07005fbaf28d90168a951e70fc29af 284 SUPERFAMILY SSF53474 4 277 4.65E-76 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_0707 af07005fbaf28d90168a951e70fc29af 284 Gene3D G3DSA:3.40.50.1820 5 283 6.9E-85 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_0707 af07005fbaf28d90168a951e70fc29af 284 Pfam PF00756 Putative esterase 24 274 9.3E-56 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Acife_1951 64a33231cec2f285aae4dead295206fd 254 Pfam PF01844 HNH endonuclease 190 235 3.0E-5 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Acife_3115 013858f974a4c9a8938608d2e32164a4 160 SUPERFAMILY SSF55729 5 154 3.09E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_3115 013858f974a4c9a8938608d2e32164a4 160 Pfam PF13508 Acetyltransferase (GNAT) domain 59 149 2.1E-10 T 12-10-2018 IPR000182 GNAT domain Acife_3115 013858f974a4c9a8938608d2e32164a4 160 Gene3D G3DSA:3.40.630.30 1 153 1.6E-20 T 12-10-2018 Acife_0788 d7f22c294d1528e6068478b8ef9b2d26 117 Pfam PF00403 Heavy-metal-associated domain 48 110 3.2E-6 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Acife_0788 d7f22c294d1528e6068478b8ef9b2d26 117 Gene3D G3DSA:3.30.70.100 39 115 4.9E-12 T 12-10-2018 Acife_0788 d7f22c294d1528e6068478b8ef9b2d26 117 SUPERFAMILY SSF55008 44 114 9.69E-12 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Acife_1706 b0dbd3dfcd5031f65bf2387dd637d593 393 SUPERFAMILY SSF53756 2 385 2.72E-79 T 12-10-2018 Acife_1706 b0dbd3dfcd5031f65bf2387dd637d593 393 Pfam PF00534 Glycosyl transferases group 1 198 364 1.4E-32 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_1706 b0dbd3dfcd5031f65bf2387dd637d593 393 Gene3D G3DSA:3.40.50.2000 186 366 5.4E-73 T 12-10-2018 Acife_1706 b0dbd3dfcd5031f65bf2387dd637d593 393 Gene3D G3DSA:3.40.50.2000 5 382 5.4E-73 T 12-10-2018 Acife_1706 b0dbd3dfcd5031f65bf2387dd637d593 393 Pfam PF13439 Glycosyltransferase Family 4 15 189 3.4E-29 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Acife_1240 682e894ab0d64010bde922f596a989b5 759 Pfam PF00092 von Willebrand factor type A domain 569 723 6.6E-9 T 12-10-2018 IPR002035 von Willebrand factor, type A Acife_1240 682e894ab0d64010bde922f596a989b5 759 SMART SM00327 566 751 3.1E-14 T 12-10-2018 IPR002035 von Willebrand factor, type A Acife_1240 682e894ab0d64010bde922f596a989b5 759 Gene3D G3DSA:3.40.50.410 566 754 4.1E-16 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Acife_1240 682e894ab0d64010bde922f596a989b5 759 SUPERFAMILY SSF53300 567 752 1.53E-20 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Acife_2657 33930be651291bba9600c1ef62f22fd3 358 Gene3D G3DSA:2.40.160.60 24 358 3.6E-44 T 12-10-2018 Acife_2657 33930be651291bba9600c1ef62f22fd3 358 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 216 358 1.1E-14 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Acife_2657 33930be651291bba9600c1ef62f22fd3 358 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 15 169 1.2E-16 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Acife_2657 33930be651291bba9600c1ef62f22fd3 358 SUPERFAMILY SSF56935 30 355 1.53E-44 T 12-10-2018 Acife_1205 35152cd61e6efc5316cdc8fd4f5c138e 78 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 74 2.1E-14 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Acife_1205 35152cd61e6efc5316cdc8fd4f5c138e 78 Gene3D G3DSA:3.30.2310.20 3 77 3.0E-23 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Acife_1205 35152cd61e6efc5316cdc8fd4f5c138e 78 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 72 9.4E-8 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Acife_2047 42f87024066d757db14e4395847a036a 289 Gene3D G3DSA:3.40.50.620 8 187 1.5E-63 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2047 42f87024066d757db14e4395847a036a 289 SUPERFAMILY SSF52374 7 287 1.06E-90 T 12-10-2018 Acife_2047 42f87024066d757db14e4395847a036a 289 Pfam PF02569 Pantoate-beta-alanine ligase 13 285 2.6E-87 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Acife_2047 42f87024066d757db14e4395847a036a 289 Gene3D G3DSA:3.30.1300.10 188 288 1.1E-23 T 12-10-2018 Acife_2047 42f87024066d757db14e4395847a036a 289 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 11 287 2.4E-79 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Acife_2047 42f87024066d757db14e4395847a036a 289 Hamap MF_00158 Pantothenate synthetase [panC]. 12 287 35.225 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Acife_2391 76f79cf251bfc9573f001b91da3ac45f 184 SMART SM00464 6 181 3.1E-6 T 12-10-2018 IPR003111 Lon, substrate-binding domain Acife_2391 76f79cf251bfc9573f001b91da3ac45f 184 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 8 111 3.9E-13 T 12-10-2018 IPR003111 Lon, substrate-binding domain Acife_2391 76f79cf251bfc9573f001b91da3ac45f 184 Gene3D G3DSA:2.30.130.40 4 109 1.1E-22 T 12-10-2018 Acife_2391 76f79cf251bfc9573f001b91da3ac45f 184 SUPERFAMILY SSF88697 8 180 5.96E-32 T 12-10-2018 IPR015947 PUA-like superfamily Acife_1587 660cd03921dce3daad0e8c4fa81b7b49 390 SUPERFAMILY SSF48208 16 376 1.93E-84 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Acife_1587 660cd03921dce3daad0e8c4fa81b7b49 390 PRINTS PR00735 Glycosyl hydrolase family 8 signature 356 370 1.9E-12 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1587 660cd03921dce3daad0e8c4fa81b7b49 390 PRINTS PR00735 Glycosyl hydrolase family 8 signature 231 242 1.9E-12 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1587 660cd03921dce3daad0e8c4fa81b7b49 390 PRINTS PR00735 Glycosyl hydrolase family 8 signature 255 264 1.9E-12 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1587 660cd03921dce3daad0e8c4fa81b7b49 390 PRINTS PR00735 Glycosyl hydrolase family 8 signature 65 78 1.9E-12 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1587 660cd03921dce3daad0e8c4fa81b7b49 390 PRINTS PR00735 Glycosyl hydrolase family 8 signature 127 145 1.9E-12 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1587 660cd03921dce3daad0e8c4fa81b7b49 390 Pfam PF01270 Glycosyl hydrolases family 8 24 368 6.6E-64 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Acife_1587 660cd03921dce3daad0e8c4fa81b7b49 390 Gene3D G3DSA:1.50.10.10 36 385 7.3E-118 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Acife_0389 fc12a955ed67b151e45f53e586d94a75 137 SUPERFAMILY SSF51182 29 130 9.64E-8 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Acife_0389 fc12a955ed67b151e45f53e586d94a75 137 Gene3D G3DSA:2.60.120.10 3 126 3.8E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Acife_0723 32673a63371b20ca32b1b845d1873b38 368 SUPERFAMILY SSF46565 209 243 1.44E-5 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Acife_2971 63b77d74f9e771d263c6e55fc4f1c0da 1120 Pfam PF07916 TraG-like protein, N-terminal region 5 498 1.3E-33 T 12-10-2018 IPR012931 TraG-like, N-terminal Acife_2951 769bdb3e6ac9174d81b0331447e50445 505 SUPERFAMILY SSF53300 341 477 3.81E-12 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Acife_2951 769bdb3e6ac9174d81b0331447e50445 505 Gene3D G3DSA:3.40.50.410 336 498 5.6E-9 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Acife_2421 367f49aad25c22cb1f72bc6d7072a03e 100 Gene3D G3DSA:1.10.10.10 2 98 1.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2421 367f49aad25c22cb1f72bc6d7072a03e 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 8.8E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_2421 367f49aad25c22cb1f72bc6d7072a03e 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 8.8E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_2421 367f49aad25c22cb1f72bc6d7072a03e 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 48 8.8E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_2421 367f49aad25c22cb1f72bc6d7072a03e 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 8.8E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_2421 367f49aad25c22cb1f72bc6d7072a03e 100 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 2.2E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_2421 367f49aad25c22cb1f72bc6d7072a03e 100 SMART SM00418 16 94 2.7E-23 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Acife_2421 367f49aad25c22cb1f72bc6d7072a03e 100 SUPERFAMILY SSF46785 5 98 7.39E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_1438 708e06ff7b436ba46c866c5ddd6775ad 153 Pfam PF02620 Uncharacterized ACR, COG1399 59 145 5.4E-9 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Acife_0215 2b33365bb2ce0f29c30173451773198b 288 Pfam PF00892 EamA-like transporter family 143 280 5.9E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Acife_0215 2b33365bb2ce0f29c30173451773198b 288 SUPERFAMILY SSF103481 182 282 3.4E-10 T 12-10-2018 Acife_2369 5b92b10c365bf71850986c91f2faa7c2 218 Pfam PF08747 Domain of unknown function (DUF1788) 79 213 3.7E-37 T 12-10-2018 IPR014858 Protein of unknown function DUF1788 Acife_1659 9e20370d2b014dc991255bb152433603 170 SUPERFAMILY SSF48452 38 163 6.9E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1659 9e20370d2b014dc991255bb152433603 170 Gene3D G3DSA:1.25.40.10 35 170 3.7E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_2159 82cca72b3eadaa074be93e3e161e5538 197 Pfam PF05137 Fimbrial assembly protein (PilN) 100 176 3.4E-21 T 12-10-2018 IPR007813 Fimbrial assembly PilN Acife_2586 5a08f8380530d2d58c390490bd09e82b 125 Gene3D G3DSA:1.10.10.10 2 114 6.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_2586 5a08f8380530d2d58c390490bd09e82b 125 SUPERFAMILY SSF46785 17 110 2.17E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_2586 5a08f8380530d2d58c390490bd09e82b 125 Pfam PF03551 Transcriptional regulator PadR-like family 17 89 1.4E-14 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal Acife_1166 c2be7eda8cb93ca7ee14235d5211fb93 485 Pfam PF02397 Bacterial sugar transferase 288 479 6.0E-64 T 12-10-2018 IPR003362 Bacterial sugar transferase Acife_1166 c2be7eda8cb93ca7ee14235d5211fb93 485 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 19 485 5.6E-146 T 12-10-2018 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 Acife_1166 c2be7eda8cb93ca7ee14235d5211fb93 485 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 59 485 2.9E-111 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Acife_0135 eda434f123e060fd7b093503ea423b97 229 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 8 224 50.895 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Acife_0135 eda434f123e060fd7b093503ea423b97 229 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 8 211 7.1E-58 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Acife_0135 eda434f123e060fd7b093503ea423b97 229 PIRSF PIRSF006293 6 229 5.0E-74 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Acife_0135 eda434f123e060fd7b093503ea423b97 229 SUPERFAMILY SSF52402 8 226 6.62E-63 T 12-10-2018 Acife_0135 eda434f123e060fd7b093503ea423b97 229 Pfam PF06508 Queuosine biosynthesis protein QueC 8 218 3.8E-72 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Acife_0135 eda434f123e060fd7b093503ea423b97 229 Gene3D G3DSA:3.40.50.620 7 226 4.4E-70 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Acife_2443 8fa6ddc464d96cb0e8e7568dd3d8980e 416 Pfam PF04966 Carbohydrate-selective porin, OprB family 87 415 1.6E-28 T 12-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 Acife_2443 8fa6ddc464d96cb0e8e7568dd3d8980e 416 Gene3D G3DSA:2.40.160.180 52 415 2.0E-59 T 12-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily Acife_0979 739d85b65d008db64fe9bc1f0c25f495 192 SUPERFAMILY SSF64288 20 186 7.06E-29 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Acife_0979 739d85b65d008db64fe9bc1f0c25f495 192 Gene3D G3DSA:3.40.1410.10 19 186 5.6E-30 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Acife_0979 739d85b65d008db64fe9bc1f0c25f495 192 Pfam PF04345 Chorismate lyase 30 182 2.1E-15 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Acife_2633 f330dcb0d99ce081ccae873f0eabd0e9 379 Gene3D G3DSA:3.50.50.60 3 313 1.2E-80 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2633 f330dcb0d99ce081ccae873f0eabd0e9 379 SUPERFAMILY SSF51905 1 150 2.23E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2633 f330dcb0d99ce081ccae873f0eabd0e9 379 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 3.4E-5 T 12-10-2018 Acife_2633 f330dcb0d99ce081ccae873f0eabd0e9 379 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 3.4E-5 T 12-10-2018 Acife_2633 f330dcb0d99ce081ccae873f0eabd0e9 379 Gene3D G3DSA:3.50.50.60 114 257 1.2E-80 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2633 f330dcb0d99ce081ccae873f0eabd0e9 379 SUPERFAMILY SSF51905 118 248 2.68E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2633 f330dcb0d99ce081ccae873f0eabd0e9 379 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 269 6.2E-16 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_0516 1b8d50bbf5b57b72401777d33c0cd72d 568 SUPERFAMILY SSF53098 368 510 1.59E-10 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0516 1b8d50bbf5b57b72401777d33c0cd72d 568 Pfam PF01609 Transposase DDE domain 225 497 9.2E-13 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Acife_3049 bce07fadcdcedb9ab686607257c2973a 519 Pfam PF03743 Bacterial conjugation TrbI-like protein 239 442 5.0E-27 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Acife_2654 3ebb66fa72541c9730c79dfafbc9c636 77 SUPERFAMILY SSF101744 3 72 2.62E-15 T 12-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 Acife_2654 3ebb66fa72541c9730c79dfafbc9c636 77 Gene3D G3DSA:2.30.30.400 8 76 4.9E-12 T 12-10-2018 IPR038626 Rof-like superfamily Acife_2654 3ebb66fa72541c9730c79dfafbc9c636 77 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 7 73 7.6E-10 T 12-10-2018 IPR009778 Modulator of Rho-dependent transcription termination Acife_1661 e42461afbcb03967ecd4078f81a49cb5 100 Pfam PF04319 NifZ domain 16 87 2.2E-28 T 12-10-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 Acife_2882 c780981dc367cdb4458bb69cabe53ac9 95 SUPERFAMILY SSF52091 3 94 1.29E-9 T 12-10-2018 IPR036513 STAS domain superfamily Acife_2882 c780981dc367cdb4458bb69cabe53ac9 95 Pfam PF13466 STAS domain 12 86 1.1E-12 T 12-10-2018 IPR002645 STAS domain Acife_2882 c780981dc367cdb4458bb69cabe53ac9 95 Gene3D G3DSA:3.30.750.24 6 95 8.4E-9 T 12-10-2018 IPR036513 STAS domain superfamily Acife_2083 cc74120d5a5d4f43d719b3de0eef7014 90 Pfam PF08681 Protein of unknown function (DUF1778) 6 80 1.7E-24 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Acife_2083 cc74120d5a5d4f43d719b3de0eef7014 90 SUPERFAMILY SSF47598 3 79 3.56E-20 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_2083 cc74120d5a5d4f43d719b3de0eef7014 90 Gene3D G3DSA:1.20.5.780 1 83 1.1E-11 T 12-10-2018 Acife_2271 d82ec3a9570faecb00e6c871ef38c53a 191 SUPERFAMILY SSF52833 8 187 4.6E-43 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2271 d82ec3a9570faecb00e6c871ef38c53a 191 Gene3D G3DSA:3.40.30.10 3 191 1.0E-46 T 12-10-2018 Acife_2271 d82ec3a9570faecb00e6c871ef38c53a 191 Pfam PF00578 AhpC/TSA family 10 132 2.4E-16 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Acife_0852 a091e9478172c1f3d5ee4360d8d88ced 507 SUPERFAMILY SSF52091 405 490 2.16E-14 T 12-10-2018 IPR036513 STAS domain superfamily Acife_0852 a091e9478172c1f3d5ee4360d8d88ced 507 Pfam PF01740 STAS domain 404 486 4.4E-10 T 12-10-2018 IPR002645 STAS domain Acife_0852 a091e9478172c1f3d5ee4360d8d88ced 507 Pfam PF00916 Sulfate permease family 13 361 2.5E-42 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Acife_0852 a091e9478172c1f3d5ee4360d8d88ced 507 Gene3D G3DSA:3.30.750.24 396 487 1.6E-27 T 12-10-2018 IPR036513 STAS domain superfamily Acife_2051 51178e24ec279ff88f2a3b1cae5108da 208 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 51 199 1.5E-9 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal Acife_2051 51178e24ec279ff88f2a3b1cae5108da 208 SUPERFAMILY SSF53639 50 188 5.69E-13 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Acife_2051 51178e24ec279ff88f2a3b1cae5108da 208 Gene3D G3DSA:3.40.225.10 32 205 2.8E-14 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Acife_0404 9015ebcc146006d774225fb3b20ff3ab 76 Pfam PF13986 Domain of unknown function (DUF4224) 5 49 3.4E-16 T 12-10-2018 IPR025319 Domain of unknown function DUF4224 Acife_2935 7213b8e1d38e3e315d5bc21de58e38a0 677 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 48 666 32.377 T 12-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup Acife_2935 7213b8e1d38e3e315d5bc21de58e38a0 677 Pfam PF02705 K+ potassium transporter 57 588 2.6E-201 T 12-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 Acife_0083 5300bd4016a570dd409758f2d9bd0d88 616 Pfam PF05140 ResB-like family 25 594 2.7E-122 T 12-10-2018 IPR007816 ResB-like domain Acife_1378 d06ce76e50b58f5e3e5b98d629889d0a 270 Pfam PF02656 Domain of unknown function (DUF202) 157 233 1.5E-15 T 12-10-2018 IPR003807 Domain of unknown function DUF202 Acife_3148 56400a0ba5c83b5944f2bb5cba744aea 192 SUPERFAMILY SSF81342 5 189 3.88E-12 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Acife_3148 56400a0ba5c83b5944f2bb5cba744aea 192 Pfam PF01292 Prokaryotic cytochrome b561 6 185 2.0E-15 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Acife_2906 a6c38422a77a08c076da948465d8ba85 184 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 11 182 3.4E-37 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Acife_2906 a6c38422a77a08c076da948465d8ba85 184 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 182 2.1E-24 T 12-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Acife_2906 a6c38422a77a08c076da948465d8ba85 184 Gene3D G3DSA:2.60.450.10 65 184 8.2E-6 T 12-10-2018 Acife_2132 0088b7d9aa9241896f3714fd1a2b586b 103 Pfam PF03413 Peptidase propeptide and YPEB domain 36 94 1.1E-10 T 12-10-2018 IPR025711 PepSY domain Acife_2132 0088b7d9aa9241896f3714fd1a2b586b 103 Gene3D G3DSA:3.10.450.40 28 98 7.2E-13 T 12-10-2018 Acife_2365 26e50dc006f18855a208a52ff41962b6 299 Pfam PF12835 Integrase 101 253 1.1E-31 T 12-10-2018 IPR024456 Integrase catalytic domain, putative Acife_2365 26e50dc006f18855a208a52ff41962b6 299 Pfam PF12834 Phage integrase, N-terminal 3 87 2.3E-22 T 12-10-2018 IPR024457 Putative integrase, N-terminal Acife_2365 26e50dc006f18855a208a52ff41962b6 299 Gene3D G3DSA:1.10.150.130 8 91 1.9E-7 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Acife_2365 26e50dc006f18855a208a52ff41962b6 299 SUPERFAMILY SSF56349 10 281 2.0E-13 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_1795 e8faef1c387fc272587ec1ac92f5546f 348 Pfam PF13460 NAD(P)H-binding 10 152 3.3E-15 T 12-10-2018 IPR016040 NAD(P)-binding domain Acife_1795 e8faef1c387fc272587ec1ac92f5546f 348 Gene3D G3DSA:3.40.50.720 4 322 3.7E-47 T 12-10-2018 Acife_1795 e8faef1c387fc272587ec1ac92f5546f 348 SUPERFAMILY SSF51735 1 291 1.16E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Acife_0946 5168fde27a4437fde93e39822cb55881 180 Pfam PF05163 DinB family 4 173 2.4E-30 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB Acife_0946 5168fde27a4437fde93e39822cb55881 180 Gene3D G3DSA:1.20.120.450 4 174 9.7E-44 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Acife_0946 5168fde27a4437fde93e39822cb55881 180 SUPERFAMILY SSF109854 6 160 2.38E-32 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Acife_0150 76b867f17784274c8216027b263517ae 109 Pfam PF02656 Domain of unknown function (DUF202) 24 83 3.5E-13 T 12-10-2018 IPR003807 Domain of unknown function DUF202 Acife_2967 ca463d7615f769b31b145504f37df945 137 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 12.807 T 12-10-2018 IPR022907 VapC family GO:0004540 Acife_2967 ca463d7615f769b31b145504f37df945 137 Gene3D G3DSA:3.40.50.1010 1 132 2.8E-40 T 12-10-2018 Acife_2967 ca463d7615f769b31b145504f37df945 137 Pfam PF01850 PIN domain 4 124 4.6E-15 T 12-10-2018 IPR002716 PIN domain Acife_2967 ca463d7615f769b31b145504f37df945 137 SUPERFAMILY SSF88723 3 131 4.77E-35 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_0711 1b7b2a3b65751099b8113d46558cc5c3 149 SUPERFAMILY SSF143880 5 87 1.44E-13 T 12-10-2018 IPR036782 NE0471-like, N-terminal Acife_0711 1b7b2a3b65751099b8113d46558cc5c3 149 Gene3D G3DSA:1.10.260.40 88 149 2.8E-18 T 12-10-2018 Acife_0711 1b7b2a3b65751099b8113d46558cc5c3 149 Gene3D G3DSA:3.30.2020.10 2 87 9.9E-15 T 12-10-2018 IPR036782 NE0471-like, N-terminal Acife_0711 1b7b2a3b65751099b8113d46558cc5c3 149 Pfam PF10387 Protein of unknown function (DUF2442) 9 81 8.6E-8 T 12-10-2018 IPR018841 Protein of unknown function DUF2442 Acife_0711 1b7b2a3b65751099b8113d46558cc5c3 149 SUPERFAMILY SSF47413 92 143 6.43E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_2350 b917fff8b30ad65f3cb189d3c37ed76c 115 Pfam PF05717 IS66 Orf2 like protein 8 102 4.8E-38 T 12-10-2018 IPR008878 Transposase IS66, Orf2 Acife_1894 67d2d810a192644b5785916910510a03 462 Gene3D G3DSA:2.40.128.260 247 428 6.3E-52 T 12-10-2018 Acife_1894 67d2d810a192644b5785916910510a03 462 Gene3D G3DSA:1.10.1200.160 373 409 6.3E-52 T 12-10-2018 Acife_1894 67d2d810a192644b5785916910510a03 462 Pfam PF03743 Bacterial conjugation TrbI-like protein 244 430 2.2E-49 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Acife_2675 e4589c41a1720a1740bfac571f32c4e7 118 Pfam PF12732 YtxH-like protein 6 83 1.0E-14 T 12-10-2018 IPR024623 Uncharacterised protein family YtxH Acife_2661 1903685311957adb99125f0ccbe4a950 191 SMART SM00463 102 186 3.3E-13 T 12-10-2018 IPR002625 Smr domain Acife_2661 1903685311957adb99125f0ccbe4a950 191 Pfam PF01713 Smr domain 105 185 1.1E-20 T 12-10-2018 IPR002625 Smr domain Acife_2661 1903685311957adb99125f0ccbe4a950 191 Gene3D G3DSA:3.30.1370.110 60 190 4.8E-37 T 12-10-2018 Acife_2661 1903685311957adb99125f0ccbe4a950 191 SUPERFAMILY SSF160443 104 185 1.29E-18 T 12-10-2018 IPR036063 Smr domain superfamily Acife_0948 66f56b61c94f81bedb3818a9514b1a77 340 Gene3D G3DSA:3.30.420.10 125 292 1.0E-10 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Acife_0948 66f56b61c94f81bedb3818a9514b1a77 340 SUPERFAMILY SSF53098 129 298 9.48E-38 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0948 66f56b61c94f81bedb3818a9514b1a77 340 SUPERFAMILY SSF46689 5 106 4.21E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_0948 66f56b61c94f81bedb3818a9514b1a77 340 Pfam PF00665 Integrase core domain 129 244 6.1E-22 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Acife_0948 66f56b61c94f81bedb3818a9514b1a77 340 Pfam PF13565 Homeodomain-like domain 27 102 7.4E-10 T 12-10-2018 Acife_2973 120cbb6465884e282c55ec8318505aed 321 SUPERFAMILY SSF52833 163 251 6.78E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_2973 120cbb6465884e282c55ec8318505aed 321 Pfam PF13728 F plasmid transfer operon protein 35 261 6.3E-58 T 12-10-2018 IPR039555 F plasmid transfer operon protein Acife_1939 d8e1524f373b741bba02ab37455c3628 367 Gene3D G3DSA:1.25.10.10 11 176 1.8E-8 T 12-10-2018 IPR011989 Armadillo-like helical Acife_1939 d8e1524f373b741bba02ab37455c3628 367 SUPERFAMILY SSF48371 42 230 4.61E-9 T 12-10-2018 IPR016024 Armadillo-type fold Acife_0502 c22c03baad364ca825e10c7fc2b5e87f 120 Gene3D G3DSA:2.40.50.320 44 118 4.3E-19 T 12-10-2018 Acife_0502 c22c03baad364ca825e10c7fc2b5e87f 120 Pfam PF11604 Copper binding periplasmic protein CusF 50 117 7.4E-22 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF Acife_0814 c22c03baad364ca825e10c7fc2b5e87f 120 Gene3D G3DSA:2.40.50.320 44 118 4.3E-19 T 12-10-2018 Acife_0814 c22c03baad364ca825e10c7fc2b5e87f 120 Pfam PF11604 Copper binding periplasmic protein CusF 50 117 7.4E-22 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF Acife_0613 6e1e366faa02c2e843792cde97fd0425 245 Gene3D G3DSA:1.10.760.10 24 197 7.8E-16 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_0613 6e1e366faa02c2e843792cde97fd0425 245 Pfam PF02167 Cytochrome C1 family 32 229 1.2E-15 T 12-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Acife_0613 6e1e366faa02c2e843792cde97fd0425 245 SUPERFAMILY SSF46626 26 195 6.65E-40 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_2905 8d8c40f4cc898945432d39ad4d254083 176 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 30 164 4.8E-39 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Acife_2905 8d8c40f4cc898945432d39ad4d254083 176 Pfam PF03968 OstA-like protein 39 146 2.5E-21 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Acife_2905 8d8c40f4cc898945432d39ad4d254083 176 Gene3D G3DSA:2.60.450.10 34 162 1.0E-31 T 12-10-2018 Acife_2905 8d8c40f4cc898945432d39ad4d254083 176 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 15 165 19.155 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Acife_0752 fb356010515858f66ed91c8fa5782ed3 91 SMART SM00411 1 90 5.0E-26 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0752 fb356010515858f66ed91c8fa5782ed3 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.3E-28 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0752 fb356010515858f66ed91c8fa5782ed3 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.1E-9 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0752 fb356010515858f66ed91c8fa5782ed3 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.1E-9 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0752 fb356010515858f66ed91c8fa5782ed3 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.1E-9 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Acife_0752 fb356010515858f66ed91c8fa5782ed3 91 SUPERFAMILY SSF47729 1 90 8.1E-26 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_0752 fb356010515858f66ed91c8fa5782ed3 91 Gene3D G3DSA:4.10.520.10 1 90 5.7E-28 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Acife_2115 96eb8d1980b5f0d80658c88a8aca1430 118 SUPERFAMILY SSF46785 47 99 5.94E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0542 9e6e203fd173d818f094d5924cecc59d 245 Pfam PF16932 Type IV secretory system, conjugal DNA-protein transfer 28 241 3.0E-51 T 12-10-2018 IPR031618 Putative type IV secretory system protein Acife_0333 8d407b018c4b923c153bff22e859120f 145 Pfam PF13767 Domain of unknown function (DUF4168) 63 140 5.4E-13 T 12-10-2018 IPR025433 Domain of unknown function DUF4168 Acife_0429 4bac99697b2e66f5cdeb2595913dd9cf 73 Pfam PF04255 Protein of unknown function (DUF433) 6 61 1.3E-26 T 12-10-2018 IPR007367 Protein of unknown function DUF433 Acife_0429 4bac99697b2e66f5cdeb2595913dd9cf 73 SUPERFAMILY SSF46689 2 68 1.97E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Acife_0429 4bac99697b2e66f5cdeb2595913dd9cf 73 Gene3D G3DSA:1.10.10.10 5 70 1.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0963 7bb6bf7cff87649c6e1a61e986e24677 471 Gene3D G3DSA:2.70.70.10 343 470 1.8E-26 T 12-10-2018 IPR011055 Duplicated hybrid motif Acife_0963 7bb6bf7cff87649c6e1a61e986e24677 471 Pfam PF01551 Peptidase family M23 372 465 4.5E-21 T 12-10-2018 IPR016047 Peptidase M23 Acife_0963 7bb6bf7cff87649c6e1a61e986e24677 471 SUPERFAMILY SSF51261 306 469 1.83E-33 T 12-10-2018 IPR011055 Duplicated hybrid motif Acife_1418 c821858cf60dc3a5365d0eab669b688d 261 Pfam PF13432 Tetratricopeptide repeat 28 90 1.5E-10 T 12-10-2018 Acife_1418 c821858cf60dc3a5365d0eab669b688d 261 Pfam PF09613 Bacterial type III secretion protein (HrpB1_HrpK) 28 93 2.3E-7 T 12-10-2018 IPR013394 Type III secretion system, HrpB1/HrpK Acife_1418 c821858cf60dc3a5365d0eab669b688d 261 Gene3D G3DSA:1.25.40.10 27 94 1.1E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1418 c821858cf60dc3a5365d0eab669b688d 261 SUPERFAMILY SSF48452 29 88 2.13E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1680 8dc9c74de5512119200736563e92fac6 146 Pfam PF09722 Protein of unknown function (DUF2384) 93 143 4.4E-17 T 12-10-2018 IPR024467 Domain of unknown function DUF2384 Acife_1680 8dc9c74de5512119200736563e92fac6 146 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 20 146 1.0E-23 T 12-10-2018 IPR011979 Conserved hypothetical protein CHP02293 Acife_1447 2d1123209f2d09ca0b919f932d31e207 337 Pfam PF02618 YceG-like family 40 326 1.1E-69 T 12-10-2018 IPR003770 Endolytic murein transglycosylase Acife_1447 2d1123209f2d09ca0b919f932d31e207 337 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 10 330 9.7E-70 T 12-10-2018 IPR003770 Endolytic murein transglycosylase Acife_1447 2d1123209f2d09ca0b919f932d31e207 337 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 10 331 30.311 T 12-10-2018 IPR003770 Endolytic murein transglycosylase Acife_1412 39a92b98b5d35b06211b6eba990f8a2f 212 SUPERFAMILY SSF52540 3 185 1.36E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1412 39a92b98b5d35b06211b6eba990f8a2f 212 Gene3D G3DSA:3.40.50.300 4 206 4.0E-36 T 12-10-2018 Acife_1412 39a92b98b5d35b06211b6eba990f8a2f 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 173 3.2E-14 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Acife_1412 39a92b98b5d35b06211b6eba990f8a2f 212 PIRSF PIRSF009320 1 208 1.1E-23 T 12-10-2018 Acife_2678 d997a92b48adbaa2c0ac3acb52973555 121 Pfam PF01219 Prokaryotic diacylglycerol kinase 13 112 6.3E-29 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Acife_2678 d997a92b48adbaa2c0ac3acb52973555 121 Gene3D G3DSA:1.10.3830.10 2 118 2.3E-32 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Acife_1985 7a40d0072ca0ddc9346ecde274bfa5f7 350 SUPERFAMILY SSF48695 110 219 6.28E-5 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily Acife_1924 1293b3b6a1f998456159d06f0d1cd9f3 89 Gene3D G3DSA:2.10.260.10 1 88 1.0E-11 T 12-10-2018 Acife_1924 1293b3b6a1f998456159d06f0d1cd9f3 89 SMART SM00966 7 52 0.0021 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Acife_1924 1293b3b6a1f998456159d06f0d1cd9f3 89 SUPERFAMILY SSF89447 4 68 2.62E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Acife_0586 184409673d1885b0378396c127c84a63 386 Pfam PF00793 DAHP synthetase I family 115 362 4.8E-42 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Acife_0586 184409673d1885b0378396c127c84a63 386 Gene3D G3DSA:3.20.20.70 98 370 2.8E-69 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Acife_0586 184409673d1885b0378396c127c84a63 386 Gene3D G3DSA:3.30.70.1140 15 97 7.8E-7 T 12-10-2018 Acife_0586 184409673d1885b0378396c127c84a63 386 SUPERFAMILY SSF51569 31 374 2.56E-72 T 12-10-2018 Acife_0480 35d3ee3ab1b08928fdc9cf816dc59e4f 167 Gene3D G3DSA:3.40.630.30 15 167 6.2E-30 T 12-10-2018 Acife_0480 35d3ee3ab1b08928fdc9cf816dc59e4f 167 Pfam PF00583 Acetyltransferase (GNAT) family 44 144 2.9E-15 T 12-10-2018 IPR000182 GNAT domain Acife_0480 35d3ee3ab1b08928fdc9cf816dc59e4f 167 SUPERFAMILY SSF55729 18 167 3.09E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Acife_0230 235ef4fd3a57874f218604c502c40d64 68 SUPERFAMILY SSF55008 4 66 1.44E-19 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Acife_0230 235ef4fd3a57874f218604c502c40d64 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Acife_0230 235ef4fd3a57874f218604c502c40d64 68 Gene3D G3DSA:3.30.70.100 4 67 6.5E-25 T 12-10-2018 Acife_0230 235ef4fd3a57874f218604c502c40d64 68 Pfam PF00403 Heavy-metal-associated domain 6 63 2.7E-15 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Acife_0424 37efdd0ef296d68d843dd46b2518de82 366 Pfam PF12293 Putative outer membrane core complex of type IVb secretion 115 351 1.4E-47 T 12-10-2018 IPR022073 Putative outer membrane core complex of type IVb secretion Acife_2251 2e4db617971a1ff58a533ecb55bebbb7 390 Pfam PF13289 SIR2-like domain 179 345 3.7E-10 T 12-10-2018 IPR039444 SIR2-like domain Acife_1611 e0708a101afdf2cef74c4d901d66b883 469 Pfam PF13638 PIN domain 17 157 4.1E-40 T 12-10-2018 IPR002716 PIN domain Acife_1611 e0708a101afdf2cef74c4d901d66b883 469 SUPERFAMILY SSF88723 16 158 3.14E-14 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_1611 e0708a101afdf2cef74c4d901d66b883 469 Pfam PF02562 PhoH-like protein 256 458 1.1E-52 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 Acife_1611 e0708a101afdf2cef74c4d901d66b883 469 SUPERFAMILY SSF52540 130 449 8.42E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1611 e0708a101afdf2cef74c4d901d66b883 469 SMART SM00670 15 144 1.1E-11 T 12-10-2018 IPR002716 PIN domain Acife_1611 e0708a101afdf2cef74c4d901d66b883 469 Gene3D G3DSA:3.40.50.1010 11 160 2.5E-24 T 12-10-2018 Acife_1611 e0708a101afdf2cef74c4d901d66b883 469 Gene3D G3DSA:3.40.50.300 255 467 1.2E-64 T 12-10-2018 Acife_1038 265266f43537614d902ae884970f85a4 103 Pfam PF01381 Helix-turn-helix 46 82 1.6E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_1038 265266f43537614d902ae884970f85a4 103 SUPERFAMILY SSF47413 45 90 2.17E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Acife_1038 265266f43537614d902ae884970f85a4 103 Gene3D G3DSA:1.10.260.40 2 100 3.1E-20 T 12-10-2018 Acife_1038 265266f43537614d902ae884970f85a4 103 SMART SM00530 43 97 2.8E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Acife_1234 30dd5888d1c0fbeca686e0214f8cefd5 149 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Acife_1234 30dd5888d1c0fbeca686e0214f8cefd5 149 SUPERFAMILY SSF55811 3 140 2.17E-25 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Acife_1234 30dd5888d1c0fbeca686e0214f8cefd5 149 Gene3D G3DSA:3.90.79.10 1 147 3.6E-38 T 12-10-2018 Acife_1234 30dd5888d1c0fbeca686e0214f8cefd5 149 Pfam PF00293 NUDIX domain 6 116 6.7E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Acife_0154 f1f6017ff8e0ab039b3ce387a32d0bf8 71 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 70 3.0E-16 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Acife_0154 f1f6017ff8e0ab039b3ce387a32d0bf8 71 Pfam PF01809 Haemolytic domain 5 70 5.7E-31 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Acife_0154 f1f6017ff8e0ab039b3ce387a32d0bf8 71 SMART SM01234 3 70 2.8E-44 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Acife_0154 f1f6017ff8e0ab039b3ce387a32d0bf8 71 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 9 71 2.6E-28 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Acife_0154 f1f6017ff8e0ab039b3ce387a32d0bf8 71 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 3 71 24.735 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Acife_2263 49c431368eec9df7e437b26a68005185 445 Pfam PF02321 Outer membrane efflux protein 241 424 5.2E-28 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_2263 49c431368eec9df7e437b26a68005185 445 Pfam PF02321 Outer membrane efflux protein 32 217 4.4E-29 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_2263 49c431368eec9df7e437b26a68005185 445 SUPERFAMILY SSF56954 7 426 7.85E-80 T 12-10-2018 Acife_2263 49c431368eec9df7e437b26a68005185 445 Gene3D G3DSA:1.20.1600.10 27 444 9.3E-98 T 12-10-2018 Acife_2263 49c431368eec9df7e437b26a68005185 445 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 26 439 1.6E-85 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 Acife_0823 4158205ab417d22f774097a087f20d01 376 Gene3D G3DSA:1.10.287.470 103 169 6.4E-6 T 12-10-2018 Acife_0823 4158205ab417d22f774097a087f20d01 376 Gene3D G3DSA:2.40.420.20 272 359 1.3E-7 T 12-10-2018 Acife_0445 c1ec40a8066150236c19416c4bc72575 803 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 15 780 9.4E-236 T 12-10-2018 IPR018752 Uncharacterised protein family UPF0753 Acife_0445 c1ec40a8066150236c19416c4bc72575 803 Hamap MF_01871 UPF0753 protein . 8 795 21.583 T 12-10-2018 IPR018752 Uncharacterised protein family UPF0753 Acife_1340 7c9a8458362b9504f6c1bf962463db16 213 Pfam PF08241 Methyltransferase domain 39 124 5.1E-22 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Acife_1340 7c9a8458362b9504f6c1bf962463db16 213 Gene3D G3DSA:3.40.50.150 6 196 4.6E-37 T 12-10-2018 Acife_1340 7c9a8458362b9504f6c1bf962463db16 213 SUPERFAMILY SSF53335 3 169 6.14E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_0077 0e3fba4b3fbe5a277c9f80e0dccda10d 461 SUPERFAMILY SSF55103 220 459 3.76E-60 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Acife_0077 0e3fba4b3fbe5a277c9f80e0dccda10d 461 Gene3D G3DSA:3.30.465.40 3 233 8.2E-66 T 12-10-2018 Acife_0077 0e3fba4b3fbe5a277c9f80e0dccda10d 461 SUPERFAMILY SSF56176 9 216 7.94E-65 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Acife_0077 0e3fba4b3fbe5a277c9f80e0dccda10d 461 Gene3D G3DSA:1.10.45.10 418 458 1.4E-12 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Acife_0077 0e3fba4b3fbe5a277c9f80e0dccda10d 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 457 5.1E-63 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Acife_0077 0e3fba4b3fbe5a277c9f80e0dccda10d 461 Pfam PF01565 FAD binding domain 42 179 3.2E-36 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Acife_0077 0e3fba4b3fbe5a277c9f80e0dccda10d 461 Gene3D G3DSA:3.30.70.2740 336 417 1.5E-14 T 12-10-2018 Acife_2454 d4e7b397afadc880dc0c78c2171ca238 381 SUPERFAMILY SSF51430 37 368 2.75E-34 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Acife_2454 d4e7b397afadc880dc0c78c2171ca238 381 Pfam PF00248 Aldo/keto reductase family 47 369 1.6E-19 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain Acife_2454 d4e7b397afadc880dc0c78c2171ca238 381 Gene3D G3DSA:3.20.20.100 33 373 9.2E-29 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Acife_1676 d314ec9abf15c5e72c71d7e3c4af46c3 300 Pfam PF00294 pfkB family carbohydrate kinase 22 286 1.9E-35 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Acife_1676 d314ec9abf15c5e72c71d7e3c4af46c3 300 Gene3D G3DSA:3.40.1190.20 8 292 4.6E-67 T 12-10-2018 IPR029056 Ribokinase-like Acife_1676 d314ec9abf15c5e72c71d7e3c4af46c3 300 SUPERFAMILY SSF53613 10 290 4.99E-50 T 12-10-2018 IPR029056 Ribokinase-like Acife_1549 6a1711a20b46daee7a8aad87109fb7a1 1189 Pfam PF05567 Neisseria PilC beta-propeller domain 674 1027 4.6E-47 T 12-10-2018 IPR008707 PilC beta-propeller domain Acife_1549 6a1711a20b46daee7a8aad87109fb7a1 1189 SUPERFAMILY SSF50998 700 1083 2.2E-6 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Acife_2326 3d27ec621d66a1506b83dcc32e51ae23 182 Pfam PF01850 PIN domain 11 171 3.5E-11 T 12-10-2018 IPR002716 PIN domain Acife_2326 3d27ec621d66a1506b83dcc32e51ae23 182 Gene3D G3DSA:3.40.50.1010 9 176 9.7E-24 T 12-10-2018 Acife_2326 3d27ec621d66a1506b83dcc32e51ae23 182 SUPERFAMILY SSF88723 10 169 1.08E-14 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_2106 c48250e916bc4ad2635fd6f4be659f84 131 SMART SM00749 66 129 1.5E-5 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Acife_2106 c48250e916bc4ad2635fd6f4be659f84 131 Pfam PF04972 BON domain 62 128 1.2E-17 T 12-10-2018 IPR007055 BON domain Acife_1280 7d7f1e109e4392fef71c19d5c531d369 268 PRINTS PR01805 VacJ lipoprotein signature 55 71 7.7E-25 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Acife_1280 7d7f1e109e4392fef71c19d5c531d369 268 PRINTS PR01805 VacJ lipoprotein signature 142 159 7.7E-25 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Acife_1280 7d7f1e109e4392fef71c19d5c531d369 268 PRINTS PR01805 VacJ lipoprotein signature 38 51 7.7E-25 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Acife_1280 7d7f1e109e4392fef71c19d5c531d369 268 PRINTS PR01805 VacJ lipoprotein signature 106 123 7.7E-25 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Acife_1280 7d7f1e109e4392fef71c19d5c531d369 268 Pfam PF04333 MlaA lipoprotein 37 228 6.6E-67 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Acife_2049 78fdfbe5f2b0afb60e7adf11ad3223ce 229 Pfam PF06912 Protein of unknown function (DUF1275) 21 217 8.7E-29 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 Acife_1840 c3211e11d9699cc9fb8538e177245c9f 222 SUPERFAMILY SSF101322 11 214 2.48E-49 T 12-10-2018 IPR035932 HflD-like superfamily Acife_1840 c3211e11d9699cc9fb8538e177245c9f 222 Pfam PF04356 Protein of unknown function (DUF489) 14 206 9.6E-54 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD Acife_1840 c3211e11d9699cc9fb8538e177245c9f 222 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 8 214 29.002 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD Acife_1840 c3211e11d9699cc9fb8538e177245c9f 222 Gene3D G3DSA:1.10.3890.10 8 218 6.8E-58 T 12-10-2018 IPR035932 HflD-like superfamily Acife_1840 c3211e11d9699cc9fb8538e177245c9f 222 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 21 203 1.0E-21 T 12-10-2018 Acife_1465 e632642ce051f45584203c3bcd098dc3 79 Pfam PF11160 Protein of unknown function (DUF2945) 12 70 2.2E-22 T 12-10-2018 IPR021331 Protein of unknown function DUF2945 Acife_2375 47e6dabe411780ca06b61268dfa08f06 218 Pfam PF14103 Domain of unknown function (DUF4276) 5 210 9.9E-27 T 12-10-2018 IPR025455 Protein of unknown function DUF4276 Acife_2470 1204d3ccc72d65b65c465bab38ef2797 148 Pfam PF01597 Glycine cleavage H-protein 12 129 2.3E-27 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Acife_2470 1204d3ccc72d65b65c465bab38ef2797 148 Gene3D G3DSA:2.40.50.100 6 128 5.8E-22 T 12-10-2018 Acife_2470 1204d3ccc72d65b65c465bab38ef2797 148 SUPERFAMILY SSF51230 16 112 2.98E-17 T 12-10-2018 IPR011053 Single hybrid motif Acife_0703 c5cbea8461889b16d3a677904cbd7f70 1009 Pfam PF13700 Domain of unknown function (DUF4158) 10 171 1.2E-31 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 Acife_0703 c5cbea8461889b16d3a677904cbd7f70 1009 Pfam PF01526 Tn3 transposase DDE domain 596 988 8.1E-101 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 Acife_1427 b2fdbd1a1d295565e61a515d0a659ebe 90 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 8 37 4.0E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Acife_1427 b2fdbd1a1d295565e61a515d0a659ebe 90 Gene3D G3DSA:4.10.490.10 37 89 1.6E-17 T 12-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 Acife_1427 b2fdbd1a1d295565e61a515d0a659ebe 90 SUPERFAMILY SSF57652 1 88 2.49E-16 T 12-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 Acife_0652 a919a3efe9ec19c6f33690fc975605c7 194 SUPERFAMILY SSF51182 15 153 1.96E-24 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Acife_0652 a919a3efe9ec19c6f33690fc975605c7 194 Pfam PF04115 Ureidoglycolate lyase 72 158 6.2E-10 T 12-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 Acife_0652 a919a3efe9ec19c6f33690fc975605c7 194 Gene3D G3DSA:2.60.120.480 13 182 5.8E-17 T 12-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 Acife_2964 50c387331563ca003aa35ec3a0f69831 151 Gene3D G3DSA:1.20.1220.20 7 149 8.5E-28 T 12-10-2018 Acife_2964 50c387331563ca003aa35ec3a0f69831 151 Pfam PF01724 Domain of unknown function DUF29 14 149 6.6E-43 T 12-10-2018 IPR002636 Protein from unkown function DUF29 Acife_2181 28600b2dd181aaab770d3015ecee53e4 992 Pfam PF01555 DNA methylase 174 496 3.8E-29 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Acife_2181 28600b2dd181aaab770d3015ecee53e4 992 SUPERFAMILY SSF53335 146 510 1.13E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_2181 28600b2dd181aaab770d3015ecee53e4 992 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 444 466 8.3E-15 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_2181 28600b2dd181aaab770d3015ecee53e4 992 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 467 481 8.3E-15 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_2181 28600b2dd181aaab770d3015ecee53e4 992 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 236 255 8.3E-15 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_2181 28600b2dd181aaab770d3015ecee53e4 992 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 174 186 8.3E-15 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Acife_0128 0ae4bfced36257ef8d5dc51c07adf277 467 Pfam PF00534 Glycosyl transferases group 1 275 418 8.3E-23 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Acife_0128 0ae4bfced36257ef8d5dc51c07adf277 467 Gene3D G3DSA:3.40.50.2000 251 427 1.3E-30 T 12-10-2018 Acife_0128 0ae4bfced36257ef8d5dc51c07adf277 467 SUPERFAMILY SSF53756 85 446 8.52E-48 T 12-10-2018 Acife_1547 ec4d16c853fa1e2967384457336fd484 72 Pfam PF10049 Protein of unknown function (DUF2283) 2 50 1.9E-12 T 12-10-2018 IPR019270 Protein of unknown function DUF2283 Acife_2157 286a280f114d315d9080c77622b7b19a 188 Pfam PF14437 MafB19-like deaminase 14 155 2.5E-22 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Acife_2157 286a280f114d315d9080c77622b7b19a 188 SUPERFAMILY SSF53927 11 158 5.35E-50 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Acife_2157 286a280f114d315d9080c77622b7b19a 188 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 62 99 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Acife_2157 286a280f114d315d9080c77622b7b19a 188 Gene3D G3DSA:3.40.140.10 6 169 3.9E-52 T 12-10-2018 Acife_2157 286a280f114d315d9080c77622b7b19a 188 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 158 43.287 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Acife_0353 c85ec646037f716051b04454ffe3e690 363 Pfam PF03235 Protein of unknown function DUF262 47 195 7.3E-26 T 12-10-2018 IPR004919 Domain of unknown function DUF262 Acife_3140 a8ebe735b7ad78acb128a44eced413c1 88 TIGRFAM TIGR02704 carboxysome_B: carboxysome peptide B 1 80 5.5E-46 T 12-10-2018 IPR014077 Carboxysome peptide B Acife_3140 a8ebe735b7ad78acb128a44eced413c1 88 Gene3D G3DSA:2.40.50.220 1 86 7.0E-28 T 12-10-2018 IPR036677 EutN/Ccml superfamily Acife_3140 a8ebe735b7ad78acb128a44eced413c1 88 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 80 7.0E-33 T 12-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Acife_3140 a8ebe735b7ad78acb128a44eced413c1 88 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 77 3.9E-20 T 12-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Acife_3140 a8ebe735b7ad78acb128a44eced413c1 88 SUPERFAMILY SSF159133 1 82 2.09E-25 T 12-10-2018 IPR036677 EutN/Ccml superfamily Acife_1595 06ec256ccde5b02580565bfd3825c6d0 693 Gene3D G3DSA:2.60.120.260 331 453 2.8E-13 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Acife_1595 06ec256ccde5b02580565bfd3825c6d0 693 Gene3D G3DSA:2.60.120.260 32 161 2.8E-9 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Acife_1595 06ec256ccde5b02580565bfd3825c6d0 693 Pfam PF03170 Bacterial cellulose synthase subunit 35 565 2.4E-45 T 12-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 Acife_1110 18d0c6e7222b11cac32f43e0c15b24cb 42 Gene3D G3DSA:1.20.1260.30 1 38 5.2E-12 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Acife_1110 18d0c6e7222b11cac32f43e0c15b24cb 42 SUPERFAMILY SSF53335 6 35 5.81E-5 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_1110 18d0c6e7222b11cac32f43e0c15b24cb 42 Pfam PF12161 HsdM N-terminal domain 6 34 2.3E-5 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Acife_2030 437e5e5693781dd762ea35388c570b04 279 Pfam PF02616 Segregation and condensation protein ScpA 53 123 1.9E-14 T 12-10-2018 IPR003768 Segregation and condensation protein A Acife_2014 9c809c83554fdddc11b5c0026049469f 307 Pfam PF01515 Phosphate acetyl/butaryl transferase 83 286 1.5E-39 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Acife_2014 9c809c83554fdddc11b5c0026049469f 307 Gene3D G3DSA:3.40.718.10 7 299 2.7E-91 T 12-10-2018 Acife_2014 9c809c83554fdddc11b5c0026049469f 307 PIRSF PIRSF000428 1 302 1.4E-75 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Acife_2014 9c809c83554fdddc11b5c0026049469f 307 SUPERFAMILY SSF53659 13 299 2.47E-60 T 12-10-2018 Acife_0452 1dd4309d738974e1fce1d64efc8c0a72 214 SMART SM00867 42 210 5.8E-59 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Acife_0452 1dd4309d738974e1fce1d64efc8c0a72 214 SUPERFAMILY SSF101874 40 211 3.66E-51 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Acife_0452 1dd4309d738974e1fce1d64efc8c0a72 214 Pfam PF04264 YceI-like domain 43 208 9.4E-40 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Acife_0452 1dd4309d738974e1fce1d64efc8c0a72 214 Gene3D G3DSA:2.40.128.110 41 212 1.6E-47 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Acife_1941 23dfba077f19f719222bb1f8130a7f91 199 Pfam PF10502 Signal peptidase, peptidase S26 34 188 2.5E-19 T 12-10-2018 IPR019533 Peptidase S26 Acife_1941 23dfba077f19f719222bb1f8130a7f91 199 Gene3D G3DSA:2.10.109.10 78 186 4.8E-9 T 12-10-2018 Acife_1941 23dfba077f19f719222bb1f8130a7f91 199 SUPERFAMILY SSF51306 36 187 1.62E-15 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Acife_1066 e4221b4ad51693204b701660498f1b43 523 SUPERFAMILY SSF53649 350 513 1.34E-7 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Acife_1066 e4221b4ad51693204b701660498f1b43 523 Gene3D G3DSA:3.40.720.10 379 523 5.2E-39 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Acife_1066 e4221b4ad51693204b701660498f1b43 523 Gene3D G3DSA:3.40.720.10 36 237 7.9E-29 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Acife_1066 e4221b4ad51693204b701660498f1b43 523 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 32 5.9E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Acife_1066 e4221b4ad51693204b701660498f1b43 523 Pfam PF04185 Phosphoesterase family 45 495 3.1E-77 T 12-10-2018 IPR007312 Phosphoesterase GO:0016788 Acife_1847 3d157b2f978c2db61e0cfb9cf65e1a93 224 SUPERFAMILY SSF52833 53 220 3.92E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_1847 3d157b2f978c2db61e0cfb9cf65e1a93 224 Gene3D G3DSA:3.40.30.10 68 223 1.9E-24 T 12-10-2018 Acife_1847 3d157b2f978c2db61e0cfb9cf65e1a93 224 Pfam PF13098 Thioredoxin-like domain 72 220 1.3E-22 T 12-10-2018 IPR012336 Thioredoxin-like fold Acife_0369 21c96da6517e66d9e9e0ae5049aacab6 137 Gene3D G3DSA:3.40.50.1010 1 131 1.9E-8 T 12-10-2018 Acife_0369 21c96da6517e66d9e9e0ae5049aacab6 137 SUPERFAMILY SSF88723 1 128 9.53E-15 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_0369 21c96da6517e66d9e9e0ae5049aacab6 137 Pfam PF01850 PIN domain 3 127 2.9E-9 T 12-10-2018 IPR002716 PIN domain Acife_2110 4bc3d4c37c149d42e39a7180606169e1 174 Pfam PF09335 SNARE associated Golgi protein 41 161 4.6E-21 T 12-10-2018 IPR032816 SNARE associated Golgi protein Acife_2170 8a81f16f49a62e3f1fd94f8bcec9fd50 300 SUPERFAMILY SSF69593 28 269 3.92E-31 T 12-10-2018 Acife_2170 8a81f16f49a62e3f1fd94f8bcec9fd50 300 Pfam PF01553 Acyltransferase 85 198 9.1E-18 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Acife_2170 8a81f16f49a62e3f1fd94f8bcec9fd50 300 SMART SM00563 91 203 3.6E-31 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Acife_3257 8237eaf7148ab207639bf657e2926a34 262 SUPERFAMILY SSF69618 8 252 5.49E-66 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3257 8237eaf7148ab207639bf657e2926a34 262 Pfam PF02602 Uroporphyrinogen-III synthase HemD 22 248 7.7E-55 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Acife_3257 8237eaf7148ab207639bf657e2926a34 262 Gene3D G3DSA:3.40.50.10090 11 246 3.0E-66 T 12-10-2018 Acife_3257 8237eaf7148ab207639bf657e2926a34 262 Gene3D G3DSA:3.40.50.10090 40 172 3.0E-66 T 12-10-2018 Acife_2781 0f0be9e0466c716358790bfd97efa5e1 298 Pfam PF01435 Peptidase family M48 92 291 2.3E-38 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Acife_2781 0f0be9e0466c716358790bfd97efa5e1 298 Gene3D G3DSA:3.30.2010.10 77 170 2.9E-29 T 12-10-2018 Acife_0638 b1dcb1e7a79d927448e162ab8e10f5e2 222 SUPERFAMILY SSF56784 6 209 3.8E-35 T 12-10-2018 IPR036412 HAD-like superfamily Acife_0638 b1dcb1e7a79d927448e162ab8e10f5e2 222 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 174 1.8E-18 T 12-10-2018 Acife_0638 b1dcb1e7a79d927448e162ab8e10f5e2 222 Gene3D G3DSA:3.40.50.1000 10 205 1.8E-38 T 12-10-2018 IPR023214 HAD superfamily Acife_0638 b1dcb1e7a79d927448e162ab8e10f5e2 222 Gene3D G3DSA:3.90.1470.20 19 138 1.8E-38 T 12-10-2018 Acife_0638 b1dcb1e7a79d927448e162ab8e10f5e2 222 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 172 2.7E-14 T 12-10-2018 Acife_1439 6ac8f70eb6669f7507a058767b9857d2 61 Pfam PF01783 Ribosomal L32p protein family 2 57 4.4E-26 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_1439 6ac8f70eb6669f7507a058767b9857d2 61 SUPERFAMILY SSF57829 1 55 4.03E-23 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Acife_1439 6ac8f70eb6669f7507a058767b9857d2 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 1.6E-25 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_1439 6ac8f70eb6669f7507a058767b9857d2 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 20.303 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Acife_1998 ba4f8454dc4ce97248c9a36b31f6bcf7 192 Pfam PF00877 NlpC/P60 family 74 180 1.9E-29 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Acife_1998 ba4f8454dc4ce97248c9a36b31f6bcf7 192 SUPERFAMILY SSF54001 60 182 3.34E-40 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Acife_1998 ba4f8454dc4ce97248c9a36b31f6bcf7 192 Gene3D G3DSA:3.90.1720.10 27 176 2.6E-42 T 12-10-2018 Acife_0762 6c8c3a316bb18b6c4c3e17d662b0c477 154 Gene3D G3DSA:3.30.310.70 26 148 6.4E-12 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_0762 6c8c3a316bb18b6c4c3e17d662b0c477 154 Pfam PF03625 Domain of unknown function DUF302 57 119 6.9E-14 T 12-10-2018 IPR005180 Domain of unknown function DUF302 Acife_0762 6c8c3a316bb18b6c4c3e17d662b0c477 154 SUPERFAMILY SSF103247 29 145 6.8E-24 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_1070 24c0088a6bc6c82408c7cae0209ecb1c 186 SUPERFAMILY SSF55821 4 185 9.46E-42 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Acife_1070 24c0088a6bc6c82408c7cae0209ecb1c 186 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 8 185 32.214 T 12-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 Acife_1070 24c0088a6bc6c82408c7cae0209ecb1c 186 Pfam PF01300 Telomere recombination 18 185 1.0E-31 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 Acife_1070 24c0088a6bc6c82408c7cae0209ecb1c 186 Gene3D G3DSA:3.90.870.10 4 185 3.0E-47 T 12-10-2018 Acife_0902 97ec8b37a7853fc6d6af4d52afa3bf42 429 SUPERFAMILY SSF52540 52 387 3.98E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0902 97ec8b37a7853fc6d6af4d52afa3bf42 429 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 51 369 2.0E-38 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Acife_0172 d06a89f51eb26ce1050d0b8df5a18bb9 161 Gene3D G3DSA:1.10.10.10 1 139 8.8E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Acife_0172 d06a89f51eb26ce1050d0b8df5a18bb9 161 SUPERFAMILY SSF46785 3 133 4.08E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Acife_0172 d06a89f51eb26ce1050d0b8df5a18bb9 161 Pfam PF02082 Transcriptional regulator 1 83 4.9E-20 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Acife_0172 d06a89f51eb26ce1050d0b8df5a18bb9 161 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 7.1E-32 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Acife_3183 5aa19699dff9deec9a1fb39f06e1789a 392 SUPERFAMILY SSF56281 3 92 3.28E-10 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Acife_1607 6c1eb0d1dc1c9243fc7f443b99e66d07 121 Pfam PF02656 Domain of unknown function (DUF202) 35 97 1.5E-8 T 12-10-2018 IPR003807 Domain of unknown function DUF202 Acife_0158 1cceab734ba50cd21105a3ea1d655628 456 Pfam PF01566 Natural resistance-associated macrophage protein 71 426 1.0E-55 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Acife_1920 1c92a17d3e50906eab90dc51d2e16f47 922 Pfam PF12965 Domain of unknown function (DUF3854) 114 198 1.4E-8 T 12-10-2018 IPR024385 Domain of unknown function DUF3854 Acife_2242 f7f9a56e08db75ea4307c902d9f11578 53 Pfam PF12161 HsdM N-terminal domain 8 42 6.3E-8 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Acife_2242 f7f9a56e08db75ea4307c902d9f11578 53 Gene3D G3DSA:1.20.1260.30 2 44 7.0E-12 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Acife_2242 f7f9a56e08db75ea4307c902d9f11578 53 SUPERFAMILY SSF53335 6 38 1.99E-5 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Acife_1952 0d831b14d81afef810002d1c9b8858c1 156 ProDom PD028561 MEMBRANE IMMUNITY SUPERINFECTION GP66 PROTEIN IMM GP75 IMM RB69 INTEGRAL 15 54 4.0E-8 T 12-10-2018 IPR016410 Bacteriophage-associated immunity protein Acife_1952 0d831b14d81afef810002d1c9b8858c1 156 Pfam PF14373 Superinfection immunity protein 14 55 1.8E-17 T 12-10-2018 IPR016410 Bacteriophage-associated immunity protein Acife_1952 0d831b14d81afef810002d1c9b8858c1 156 Pfam PF13240 zinc-ribbon domain 135 156 6.7E-6 T 12-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 Acife_3265 864925ca7b8fe14d3be0a7af6ec2406d 162 Gene3D G3DSA:1.10.760.10 9 162 5.5E-33 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_3265 864925ca7b8fe14d3be0a7af6ec2406d 162 SUPERFAMILY SSF46626 44 157 1.09E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_3050 d29fb6bad6d7766def0fd5536d23edb9 388 Pfam PF06586 TraK protein 171 372 8.4E-21 T 12-10-2018 IPR010563 Pilus assembly TraK Acife_2614 c9e0f4a871652baad31725d706cecbfe 238 SUPERFAMILY SSF141523 89 231 2.75E-9 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Acife_2614 c9e0f4a871652baad31725d706cecbfe 238 Pfam PF03734 L,D-transpeptidase catalytic domain 96 231 3.2E-7 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Acife_1259 fb575af6ceeaf650bfe53dfed300d2ed 99 Gene3D G3DSA:3.40.50.850 42 98 1.6E-5 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Acife_3039 98a91027f6130d905ac5ffbaec04e137 266 Gene3D G3DSA:3.10.450.70 32 93 4.4E-10 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Acife_3039 98a91027f6130d905ac5ffbaec04e137 266 SUPERFAMILY SSF54423 41 82 5.1E-7 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Acife_1791 4780068f33cb8417bb6672dc642d540e 80 Gene3D G3DSA:3.10.20.30 2 80 1.2E-17 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Acife_1791 4780068f33cb8417bb6672dc642d540e 80 SUPERFAMILY SSF54285 1 80 2.99E-16 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Acife_1791 4780068f33cb8417bb6672dc642d540e 80 Pfam PF02597 ThiS family 4 80 5.6E-14 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Acife_0560 b25136677bf1eeb3c08a407f5d60225d 110 SUPERFAMILY SSF75169 4 110 8.63E-17 T 12-10-2018 IPR027396 DsrEFH-like Acife_0560 b25136677bf1eeb3c08a407f5d60225d 110 Gene3D G3DSA:3.40.1260.10 4 109 2.2E-18 T 12-10-2018 IPR027396 DsrEFH-like Acife_1044 c656ba2734f6b3d17a3bcfe46e844684 323 SUPERFAMILY SSF52540 29 266 1.61E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1044 c656ba2734f6b3d17a3bcfe46e844684 323 Gene3D G3DSA:3.40.50.300 23 188 1.7E-10 T 12-10-2018 Acife_1044 c656ba2734f6b3d17a3bcfe46e844684 323 Pfam PF13401 AAA domain 39 170 3.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_1044 c656ba2734f6b3d17a3bcfe46e844684 323 SMART SM00382 39 186 3.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_0216 497368b80acb2cd0d6c78f29f8719fe0 184 Gene3D G3DSA:1.20.120.1490 78 178 8.0E-8 T 12-10-2018 Acife_2524 8e622046453b649625fb7ca5da11dfff 128 Pfam PF00085 Thioredoxin 22 116 3.2E-5 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 Acife_2524 8e622046453b649625fb7ca5da11dfff 128 Gene3D G3DSA:3.40.30.10 22 122 2.7E-7 T 12-10-2018 Acife_2524 8e622046453b649625fb7ca5da11dfff 128 SUPERFAMILY SSF52833 17 128 7.3E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0803 f77065eba6f5b6797765f61e8063da96 254 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 229 9.5E-97 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related Acife_0803 f77065eba6f5b6797765f61e8063da96 254 SUPERFAMILY SSF52540 34 222 7.67E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0803 f77065eba6f5b6797765f61e8063da96 254 Gene3D G3DSA:3.40.50.300 2 247 5.4E-87 T 12-10-2018 Acife_0803 f77065eba6f5b6797765f61e8063da96 254 PIRSF PIRSF028756 1 254 5.8E-104 T 12-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Acife_0803 f77065eba6f5b6797765f61e8063da96 254 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 4 230 3.4E-105 T 12-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 Acife_2368 53f108e4f2a1a6dbbf3c9de18fa8f22c 210 Pfam PF08849 Putative inner membrane protein (DUF1819) 11 191 2.2E-49 T 12-10-2018 IPR014948 Protein of unknown function DUF1819, putative inner membrane Acife_2368 53f108e4f2a1a6dbbf3c9de18fa8f22c 210 Gene3D G3DSA:1.10.3540.10 6 205 7.3E-56 T 12-10-2018 Acife_2818 345ac41edd9bbb4ad20f5461faaa3554 390 Pfam PF01098 Cell cycle protein 18 372 7.4E-100 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_2818 345ac41edd9bbb4ad20f5461faaa3554 390 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 15 372 9.7E-124 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Acife_3031 294bce8e76b529ac69c763b8a34b4fb1 416 Gene3D G3DSA:2.60.120.260 257 399 1.3E-9 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Acife_3109 f6b98996fee917769b31ab1e21172c0f 288 Pfam PF12697 Alpha/beta hydrolase family 27 281 1.7E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Acife_3109 f6b98996fee917769b31ab1e21172c0f 288 SUPERFAMILY SSF53474 5 287 7.05E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_3109 f6b98996fee917769b31ab1e21172c0f 288 Gene3D G3DSA:3.40.50.1820 1 287 2.1E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_0770 6758c34926bf3347ee44574a3c5011df 162 Pfam PF07681 DoxX 30 110 1.5E-15 T 12-10-2018 IPR032808 DoxX family Acife_2791 7a4da60354c96d272cf652cd4fd88d64 417 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 208 2.4E-65 T 12-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Acife_2791 7a4da60354c96d272cf652cd4fd88d64 417 Gene3D G3DSA:3.40.50.11720 38 207 7.1E-51 T 12-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Acife_2791 7a4da60354c96d272cf652cd4fd88d64 417 SUPERFAMILY SSF53756 62 400 3.3E-11 T 12-10-2018 Acife_2791 7a4da60354c96d272cf652cd4fd88d64 417 Gene3D G3DSA:3.40.50.2000 213 400 3.9E-60 T 12-10-2018 Acife_2725 458483e7493da07b57882d568d30f397 213 PRINTS PR01021 OMPA domain signature 134 149 6.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Acife_2725 458483e7493da07b57882d568d30f397 213 PRINTS PR01021 OMPA domain signature 149 165 6.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Acife_2725 458483e7493da07b57882d568d30f397 213 PRINTS PR01021 OMPA domain signature 104 126 6.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Acife_2725 458483e7493da07b57882d568d30f397 213 Gene3D G3DSA:3.30.1330.60 86 211 1.5E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily Acife_2725 458483e7493da07b57882d568d30f397 213 Pfam PF00691 OmpA family 103 197 1.1E-18 T 12-10-2018 IPR006665 OmpA-like domain Acife_2725 458483e7493da07b57882d568d30f397 213 SUPERFAMILY SSF103088 76 202 2.88E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily Acife_2440 581dcd6b2630697d14de7364aec078ea 366 Pfam PF00877 NlpC/P60 family 253 358 1.9E-27 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Acife_2440 581dcd6b2630697d14de7364aec078ea 366 Gene3D G3DSA:3.90.1720.10 165 354 1.7E-39 T 12-10-2018 Acife_2440 581dcd6b2630697d14de7364aec078ea 366 SUPERFAMILY SSF54001 242 358 1.63E-38 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Acife_0989 2c78d9b4f27770a4858588f08e1e1fa8 274 Pfam PF00005 ABC transporter 21 166 1.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Acife_0989 2c78d9b4f27770a4858588f08e1e1fa8 274 Gene3D G3DSA:3.40.50.300 5 251 1.8E-59 T 12-10-2018 Acife_0989 2c78d9b4f27770a4858588f08e1e1fa8 274 SUPERFAMILY SSF52540 2 225 2.22E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0989 2c78d9b4f27770a4858588f08e1e1fa8 274 SMART SM00382 30 215 2.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Acife_2766 6a2ae1b7459b52ac8a60a22f864f2a31 92 Pfam PF02325 YGGT family 14 83 5.2E-23 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 Acife_2501 65119a463e190f523274a15090f9500e 109 SUPERFAMILY SSF117991 22 109 3.27E-14 T 12-10-2018 IPR027471 YbeD-like domain superfamily Acife_2501 65119a463e190f523274a15090f9500e 109 Gene3D G3DSA:3.30.70.260 22 109 9.4E-14 T 12-10-2018 Acife_2501 65119a463e190f523274a15090f9500e 109 Pfam PF04359 Protein of unknown function (DUF493) 31 109 7.9E-14 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 Acife_1199 4432f2619e996d2199a530f6812852a6 67 ProDom PD027184 VAPX PLASMID HI0451 15 66 0.001 T 12-10-2018 IPR035335 Protein of unknown function DUF5397 Acife_1199 4432f2619e996d2199a530f6812852a6 67 Pfam PF17375 Family of unknown function (DUF5397) 10 67 6.0E-15 T 12-10-2018 IPR035335 Protein of unknown function DUF5397 Acife_2129 d6875a1e8cf2c8ae29ed053a734a6a3e 454 SUPERFAMILY SSF56954 20 453 2.88E-47 T 12-10-2018 Acife_2129 d6875a1e8cf2c8ae29ed053a734a6a3e 454 Pfam PF02321 Outer membrane efflux protein 276 450 3.2E-11 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_2129 d6875a1e8cf2c8ae29ed053a734a6a3e 454 Pfam PF02321 Outer membrane efflux protein 86 253 1.3E-6 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Acife_2129 d6875a1e8cf2c8ae29ed053a734a6a3e 454 Gene3D G3DSA:1.20.1600.10 76 454 3.3E-39 T 12-10-2018 Acife_0265 ce8df851333865a0f91b16b41e73a8ac 116 Pfam PF09685 Domain of unknown function (DUF4870) 14 115 1.2E-28 T 12-10-2018 IPR019109 Protein of unknown function DUF4870 Acife_0935 a6f3add38e849353b7c25a26f6fd541d 332 SUPERFAMILY SSF52540 54 161 1.95E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0935 a6f3add38e849353b7c25a26f6fd541d 332 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 43 316 7.8E-55 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Acife_0935 a6f3add38e849353b7c25a26f6fd541d 332 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 326 2.4E-83 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Acife_0935 a6f3add38e849353b7c25a26f6fd541d 332 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 6 332 32.218 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Acife_0642 849a602ebb1ee45dde4697c758bcbe48 235 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 199 2.8E-25 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Acife_0246 933da7d66b7f4ed1eedbcd04fdb3e879 491 Pfam PF04293 SpoVR like protein 10 439 1.2E-153 T 12-10-2018 IPR007390 Sporulation stage V, protein R Acife_2161 6f9172b7d5a8efff3d67d14837d1a889 182 Pfam PF04351 Pilus assembly protein, PilP 29 178 3.8E-33 T 12-10-2018 IPR007446 Pilus assembly protein PilP Acife_2161 6f9172b7d5a8efff3d67d14837d1a889 182 Gene3D G3DSA:2.30.30.830 84 178 2.8E-16 T 12-10-2018 Acife_2580 7283cbee49ce8169e7d3688b1a5c3310 122 SUPERFAMILY SSF81593 16 113 9.81E-8 T 12-10-2018 Acife_2580 7283cbee49ce8169e7d3688b1a5c3310 122 Pfam PF01934 Protein of unknown function DUF86 14 112 4.4E-23 T 12-10-2018 IPR008201 Protein of unknown function DUF86 Acife_2580 7283cbee49ce8169e7d3688b1a5c3310 122 Gene3D G3DSA:1.20.120.330 33 118 3.9E-5 T 12-10-2018 Acife_3056 c4892353241546aaac8028e247a71ced 382 Gene3D G3DSA:3.40.30.10 231 378 8.9E-13 T 12-10-2018 Acife_0514 350ddbbf26f640bded88de90131644b7 747 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 44 705 3.3E-92 T 12-10-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY Acife_0912 6a0f6da0a4ff30211f0fa0ee49926418 237 Gene3D G3DSA:3.90.70.10 40 197 1.2E-31 T 12-10-2018 Acife_0912 6a0f6da0a4ff30211f0fa0ee49926418 237 Pfam PF03412 Peptidase C39 family 52 184 8.7E-21 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 Acife_2519 8dcca6c22caed3a53ae8fa06aaefe9af 448 Pfam PF02754 Cysteine-rich domain 253 352 3.1E-7 T 12-10-2018 IPR004017 Cysteine-rich domain Acife_0801 abda7361e8298431b48a87ea1a84416d 354 SUPERFAMILY SSF52518 4 340 5.16E-89 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Acife_0801 abda7361e8298431b48a87ea1a84416d 354 Pfam PF00676 Dehydrogenase E1 component 273 332 1.5E-5 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Acife_0801 abda7361e8298431b48a87ea1a84416d 354 Pfam PF00676 Dehydrogenase E1 component 12 265 4.8E-77 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Acife_0801 abda7361e8298431b48a87ea1a84416d 354 Gene3D G3DSA:3.40.50.970 1 269 1.3E-108 T 12-10-2018 Acife_0801 abda7361e8298431b48a87ea1a84416d 354 Gene3D G3DSA:3.40.50.970 270 351 7.5E-9 T 12-10-2018 Acife_0472 b61faea2b25d6fce7f2d7d5fd4c063fe 135 Gene3D G3DSA:3.30.70.2340 1 98 1.1E-24 T 12-10-2018 Acife_0472 b61faea2b25d6fce7f2d7d5fd4c063fe 135 Pfam PF12112 Protein of unknown function (DUF3579) 3 85 1.4E-18 T 12-10-2018 IPR021969 Protein of unknown function DUF3579 Acife_2980 1e749ef688474196ed7636b7f5928765 804 SUPERFAMILY SSF109604 173 318 5.5E-6 T 12-10-2018 Acife_2980 1e749ef688474196ed7636b7f5928765 804 SMART SM00471 168 328 0.0046 T 12-10-2018 IPR003607 HD/PDEase domain Acife_0543 1943aa16fead78eccd3588b44cef4004 163 Pfam PF16816 DotD protein 46 160 1.5E-18 T 12-10-2018 IPR031817 DotD protein Acife_0543 1943aa16fead78eccd3588b44cef4004 163 Gene3D G3DSA:3.55.50.60 45 162 7.7E-24 T 12-10-2018 IPR038140 DotD superfamily Acife_0765 637619ea39eb20fc5ff0046da2703ab4 167 Pfam PF13098 Thioredoxin-like domain 54 110 3.4E-6 T 12-10-2018 IPR012336 Thioredoxin-like fold Acife_0765 637619ea39eb20fc5ff0046da2703ab4 167 SUPERFAMILY SSF52833 51 114 7.37E-11 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0765 637619ea39eb20fc5ff0046da2703ab4 167 Gene3D G3DSA:3.40.30.10 47 160 2.9E-15 T 12-10-2018 Acife_0871 4f962378e7a558cafc86d8c8f4ab0846 718 SUPERFAMILY SSF56349 315 525 8.24E-6 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Acife_0871 4f962378e7a558cafc86d8c8f4ab0846 718 Gene3D G3DSA:1.10.443.10 293 532 1.5E-8 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Acife_1656 56850d310e8baa42a714cb306d2e43fd 72 Pfam PF00037 4Fe-4S binding domain 4 26 1.3E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Acife_1656 56850d310e8baa42a714cb306d2e43fd 72 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_1656 56850d310e8baa42a714cb306d2e43fd 72 Gene3D G3DSA:3.30.70.20 3 71 1.4E-22 T 12-10-2018 Acife_1656 56850d310e8baa42a714cb306d2e43fd 72 SUPERFAMILY SSF54862 5 63 1.07E-14 T 12-10-2018 Acife_3267 d571ba2bc0adfcae7c33ce51514c81e6 232 PRINTS PR00603 Cytochrome C1 signature 108 132 2.0E-5 T 12-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Acife_3267 d571ba2bc0adfcae7c33ce51514c81e6 232 PRINTS PR00603 Cytochrome C1 signature 45 64 2.0E-5 T 12-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Acife_3267 d571ba2bc0adfcae7c33ce51514c81e6 232 PRINTS PR00603 Cytochrome C1 signature 178 197 2.0E-5 T 12-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Acife_3267 d571ba2bc0adfcae7c33ce51514c81e6 232 Gene3D G3DSA:1.10.760.10 27 197 2.1E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_3267 d571ba2bc0adfcae7c33ce51514c81e6 232 Pfam PF02167 Cytochrome C1 family 34 231 4.3E-18 T 12-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Acife_3267 d571ba2bc0adfcae7c33ce51514c81e6 232 SUPERFAMILY SSF46626 21 195 3.53E-39 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_1406 cdaa8d00c2d0b5ba7c5419001b18bc22 147 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 33 133 6.5E-18 T 12-10-2018 IPR019223 Domain of unknown function DUF2147 Acife_1406 cdaa8d00c2d0b5ba7c5419001b18bc22 147 Gene3D G3DSA:2.40.128.520 29 146 5.2E-14 T 12-10-2018 Acife_1907 362b7fece647a6ab62d9564507bcc24f 133 Pfam PF04956 TrbC/VIRB2 family 25 111 2.6E-17 T 12-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 Acife_0119 f82e523ba1295f06ae097f13348f29d3 239 Gene3D G3DSA:2.40.10.120 4 214 7.7E-12 T 12-10-2018 Acife_0119 f82e523ba1295f06ae097f13348f29d3 239 Pfam PF13365 Trypsin-like peptidase domain 24 189 1.2E-10 T 12-10-2018 Acife_0119 f82e523ba1295f06ae097f13348f29d3 239 SUPERFAMILY SSF50494 17 215 6.85E-19 T 12-10-2018 IPR009003 Peptidase S1, PA clan Acife_2354 e4adf27a234dcbc1ef97e892ec673f9c 318 SUPERFAMILY SSF103481 229 311 1.7E-5 T 12-10-2018 Acife_2296 f2ac5d3468481e44f05437c75834c51c 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 77 127 1.4E-11 T 12-10-2018 IPR007136 Protein of unknown function DUF347 Acife_2296 f2ac5d3468481e44f05437c75834c51c 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 142 189 7.8E-10 T 12-10-2018 IPR007136 Protein of unknown function DUF347 Acife_2296 f2ac5d3468481e44f05437c75834c51c 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 197 251 5.8E-12 T 12-10-2018 IPR007136 Protein of unknown function DUF347 Acife_2600 8dfb06d30f68c51a5d88bd788264a45e 435 Gene3D G3DSA:3.50.50.60 127 293 5.5E-79 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2600 8dfb06d30f68c51a5d88bd788264a45e 435 SUPERFAMILY SSF51905 11 350 1.81E-24 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2600 8dfb06d30f68c51a5d88bd788264a45e 435 Gene3D G3DSA:3.50.50.60 12 347 5.5E-79 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Acife_2600 8dfb06d30f68c51a5d88bd788264a45e 435 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 140 1.2E-10 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Acife_1950 ad6740ecd3ebeb4c326be340ba75a863 372 Pfam PF13289 SIR2-like domain 164 310 9.0E-9 T 12-10-2018 IPR039444 SIR2-like domain Acife_2472 80e65a57c4e1c036e488810aba561223 239 Pfam PF13534 4Fe-4S dicluster domain 62 123 8.0E-10 T 12-10-2018 Acife_2472 80e65a57c4e1c036e488810aba561223 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 109 120 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Acife_2472 80e65a57c4e1c036e488810aba561223 239 Gene3D G3DSA:1.10.1060.10 28 137 3.8E-9 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Acife_2472 80e65a57c4e1c036e488810aba561223 239 SUPERFAMILY SSF46548 31 133 1.31E-17 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Acife_2885 4a6d85ca27b0d19724c30e03d4477bba 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 18 259 6.2E-85 T 12-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Acife_2885 4a6d85ca27b0d19724c30e03d4477bba 260 Pfam PF02405 Permease MlaE 46 257 4.8E-75 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Acife_2053 af316dc2d72440b294369c0df8fd39a6 232 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 30 227 1.5E-44 T 12-10-2018 IPR006214 Bax inhibitor 1-related Acife_1538 1100157cffbf8acd6b8f49a9d3c2b7fc 75 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 40 1.2E-11 T 12-10-2018 Acife_1538 1100157cffbf8acd6b8f49a9d3c2b7fc 75 Gene3D G3DSA:3.40.1620.10 1 39 2.7E-13 T 12-10-2018 Acife_1538 1100157cffbf8acd6b8f49a9d3c2b7fc 75 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 41 1.9E-13 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Acife_1538 1100157cffbf8acd6b8f49a9d3c2b7fc 75 SUPERFAMILY SSF143120 1 41 1.57E-11 T 12-10-2018 IPR036165 YefM-like superfamily Acife_2792 fa64358b95cdbf8468158e772f71c82c 226 Gene3D G3DSA:3.90.190.10 31 176 4.0E-23 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like Acife_2792 fa64358b95cdbf8468158e772f71c82c 226 Pfam PF13350 Tyrosine phosphatase family 108 145 4.8E-5 T 12-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type Acife_2792 fa64358b95cdbf8468158e772f71c82c 226 SUPERFAMILY SSF52799 32 166 5.44E-21 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like Acife_1776 ca7dceae5ecc1bfd0fb839dd53eaafcd 331 Pfam PF01594 AI-2E family transporter 2 320 1.4E-23 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like Acife_1639 2ede3191ff0f18395d91f74462977357 217 Pfam PF04891 NifQ 30 203 1.3E-47 T 12-10-2018 IPR006975 NifQ GO:0009399|GO:0030151 Acife_2595 aa0c7b7b2bf111684fb64143df8b38c4 211 SUPERFAMILY SSF81452 23 208 2.22E-38 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2595 aa0c7b7b2bf111684fb64143df8b38c4 211 Gene3D G3DSA:1.20.120.80 23 210 1.3E-38 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_2595 aa0c7b7b2bf111684fb64143df8b38c4 211 Pfam PF00510 Cytochrome c oxidase subunit III 25 209 6.2E-15 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_0208 3817705c410a940ffdb9d5a0bb908287 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.583 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 Acife_0208 3817705c410a940ffdb9d5a0bb908287 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 3.4E-48 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 Acife_0537 a982acd0795e044bfe4894a478c6ca2d 100 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 50 81 3.2E-9 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Acife_0537 a982acd0795e044bfe4894a478c6ca2d 100 Gene3D G3DSA:1.20.120.910 7 84 1.2E-9 T 12-10-2018 Acife_0677 47f7b0dba975d4d19f37ae23dc5ac550 71 Pfam PF11455 Protein of unknown function (DUF3018) 7 68 2.1E-28 T 12-10-2018 IPR021558 Protein of unknown function DUF3018 Acife_1948 48581de2261b568f1df491a8bcc6d771 1008 SUPERFAMILY SSF52540 111 293 1.73E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1948 48581de2261b568f1df491a8bcc6d771 1008 SUPERFAMILY SSF52540 112 589 5.31E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1948 48581de2261b568f1df491a8bcc6d771 1008 Gene3D G3DSA:3.40.50.300 460 599 2.9E-8 T 12-10-2018 Acife_1948 48581de2261b568f1df491a8bcc6d771 1008 Pfam PF04851 Type III restriction enzyme, res subunit 108 277 5.5E-14 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Acife_0253 3f59e3edd35d3241b7325acf1d3e6b5e 328 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 307 2.0E-79 T 12-10-2018 IPR007296 Domain of unknown function DUF403 Acife_2108 057b011ca6afa4f5c0f6fe4740fd4d97 118 Pfam PF12732 YtxH-like protein 6 71 1.1E-13 T 12-10-2018 IPR024623 Uncharacterised protein family YtxH Acife_2229 86859f376d836d992adf4d3f696f8de7 772 SUPERFAMILY SSF53300 582 766 8.9E-20 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Acife_2229 86859f376d836d992adf4d3f696f8de7 772 Gene3D G3DSA:3.40.50.410 578 758 2.8E-14 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Acife_2229 86859f376d836d992adf4d3f696f8de7 772 Pfam PF00092 von Willebrand factor type A domain 584 740 1.4E-6 T 12-10-2018 IPR002035 von Willebrand factor, type A Acife_2229 86859f376d836d992adf4d3f696f8de7 772 SMART SM00327 580 771 3.2E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A Acife_1807 92282b679785876917e36b7d6734b7e6 117 Pfam PF01934 Protein of unknown function DUF86 15 110 2.3E-30 T 12-10-2018 IPR008201 Protein of unknown function DUF86 Acife_1167 319bb4cfd97e6335c7dc64219670aa68 308 SUPERFAMILY SSF53448 5 226 5.16E-32 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1167 319bb4cfd97e6335c7dc64219670aa68 308 Pfam PF00535 Glycosyl transferase family 2 10 174 9.9E-13 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Acife_1167 319bb4cfd97e6335c7dc64219670aa68 308 Gene3D G3DSA:3.90.550.10 2 220 6.7E-27 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Acife_1854 940ea33984ce02e74c46382e3bfd1090 134 Pfam PF03413 Peptidase propeptide and YPEB domain 39 125 2.1E-4 T 12-10-2018 IPR025711 PepSY domain Acife_3037 d19164b0f0a1f0218d8552b211a931a5 419 Pfam PF06834 TraU protein 368 409 2.9E-6 T 12-10-2018 IPR009649 TraU Acife_3037 d19164b0f0a1f0218d8552b211a931a5 419 Pfam PF06834 TraU protein 47 332 7.7E-50 T 12-10-2018 IPR009649 TraU Acife_1683 660548791a00bc9c9c506e2adbf8904d 77 SUPERFAMILY SSF47598 3 47 1.85E-5 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_0830 939609c4adbdea048c1a23f43199e78c 568 SUPERFAMILY SSF53098 368 510 1.74E-10 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0830 939609c4adbdea048c1a23f43199e78c 568 Pfam PF01609 Transposase DDE domain 225 497 3.2E-13 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Acife_1236 f13986ebfdfcb4a19e9aa32132f87623 488 SUPERFAMILY SSF51445 159 425 9.44E-9 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Acife_1236 f13986ebfdfcb4a19e9aa32132f87623 488 Pfam PF13200 Putative glycosyl hydrolase domain 117 426 2.4E-117 T 12-10-2018 IPR025275 Putative glycosyl hydrolase domain DUF4015 Acife_0907 4e4db3125b7ea4789fa65efc0ff0c07f 241 Pfam PF17036 Cellulose biosynthesis protein BcsS 138 234 8.8E-11 T 12-10-2018 IPR031485 Cellulose biosynthesis protein BcsS Acife_0522 d1cec64b8f47a876fa87551639ca047c 78 Pfam PF12728 Helix-turn-helix domain 11 59 3.1E-19 T 12-10-2018 Acife_0522 d1cec64b8f47a876fa87551639ca047c 78 SUPERFAMILY SSF46955 10 59 2.75E-11 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Acife_0522 d1cec64b8f47a876fa87551639ca047c 78 Gene3D G3DSA:1.10.1660.10 7 60 7.4E-11 T 12-10-2018 Acife_0522 d1cec64b8f47a876fa87551639ca047c 78 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 11 58 6.8E-18 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Acife_1522 7a68f939534d2eb4c132a1e4a3e0d982 123 Pfam PF02635 DsrE/DsrF-like family 8 100 4.5E-12 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Acife_1522 7a68f939534d2eb4c132a1e4a3e0d982 123 Gene3D G3DSA:3.40.1260.10 1 123 2.6E-26 T 12-10-2018 IPR027396 DsrEFH-like Acife_1522 7a68f939534d2eb4c132a1e4a3e0d982 123 SUPERFAMILY SSF75169 6 123 7.23E-16 T 12-10-2018 IPR027396 DsrEFH-like Acife_1651 34d1d04d67ddcd91ca97b71428a26d74 128 Gene3D G3DSA:3.40.50.2300 14 128 1.6E-9 T 12-10-2018 Acife_1651 34d1d04d67ddcd91ca97b71428a26d74 128 SUPERFAMILY SSF52172 13 127 1.07E-10 T 12-10-2018 IPR011006 CheY-like superfamily Acife_0380 dee077baabb4d9fa255df4936e27b561 69 Pfam PF16277 Domain of unknown function (DUF4926) 3 50 5.7E-15 T 12-10-2018 IPR032568 Protein of unknown function DUF4926 Acife_1381 524e3535f1d0e593e353ca28bcc26b56 172 SUPERFAMILY SSF103247 37 163 1.31E-14 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_1381 524e3535f1d0e593e353ca28bcc26b56 172 Gene3D G3DSA:3.30.310.70 36 165 5.1E-8 T 12-10-2018 IPR035923 TT1751-like domain superfamily Acife_1381 524e3535f1d0e593e353ca28bcc26b56 172 Pfam PF03625 Domain of unknown function DUF302 91 136 5.8E-6 T 12-10-2018 IPR005180 Domain of unknown function DUF302 Acife_2182 fdbee65ddf6ff7f56321f2ad065c8d6f 280 Pfam PF02498 BRO family, N-terminal domain 22 108 4.2E-7 T 12-10-2018 IPR003497 BRO N-terminal domain Acife_2141 eba36d48dc51256f62d6e083653172d9 349 SUPERFAMILY SSF103481 54 148 1.7E-12 T 12-10-2018 Acife_2141 eba36d48dc51256f62d6e083653172d9 349 Pfam PF00892 EamA-like transporter family 14 144 5.2E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Acife_2141 eba36d48dc51256f62d6e083653172d9 349 SUPERFAMILY SSF103481 198 289 1.57E-6 T 12-10-2018 Acife_0423 2f5795419bcf18b8fb37ea7e44ffb6a5 207 Pfam PF11393 Type-IV b secretion system, inner-membrane complex component 29 202 1.1E-41 T 12-10-2018 IPR021055 Type-IV b secretion system, inner-membrane complex component Acife_0483 3114dc699ea1a09618e6ab832888aa8f 458 Pfam PF01566 Natural resistance-associated macrophage protein 72 427 9.9E-57 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Acife_1871 b4270c621e65db927ea9fb2b798775da 229 SUPERFAMILY SSF46626 60 136 2.08E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_1871 b4270c621e65db927ea9fb2b798775da 229 Pfam PF00034 Cytochrome c 61 133 2.9E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1871 b4270c621e65db927ea9fb2b798775da 229 Pfam PF00034 Cytochrome c 147 229 5.6E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Acife_1871 b4270c621e65db927ea9fb2b798775da 229 SUPERFAMILY SSF46626 143 229 2.55E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_1871 b4270c621e65db927ea9fb2b798775da 229 Gene3D G3DSA:1.10.760.10 146 229 3.2E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_1871 b4270c621e65db927ea9fb2b798775da 229 PIRSF PIRSF000005 17 229 6.7E-64 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Acife_1871 b4270c621e65db927ea9fb2b798775da 229 Gene3D G3DSA:1.10.760.10 50 132 4.6E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Acife_0644 dd74473ad009d5bf895cbb74fc0d72b8 250 SUPERFAMILY SSF74653 132 236 1.19E-18 T 12-10-2018 Acife_0644 dd74473ad009d5bf895cbb74fc0d72b8 250 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 174 241 5.9E-10 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 Acife_0644 dd74473ad009d5bf895cbb74fc0d72b8 250 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 172 236 5.9E-12 T 12-10-2018 IPR006260 TonB/TolA, C-terminal Acife_0644 dd74473ad009d5bf895cbb74fc0d72b8 250 Gene3D G3DSA:3.30.1150.10 125 245 6.8E-16 T 12-10-2018 Acife_0644 dd74473ad009d5bf895cbb74fc0d72b8 250 PRINTS PR01217 Proline rich extensin signature 65 81 1.5E-11 T 12-10-2018 Acife_0644 dd74473ad009d5bf895cbb74fc0d72b8 250 PRINTS PR01217 Proline rich extensin signature 105 130 1.5E-11 T 12-10-2018 Acife_0644 dd74473ad009d5bf895cbb74fc0d72b8 250 PRINTS PR01217 Proline rich extensin signature 84 101 1.5E-11 T 12-10-2018 Acife_0644 dd74473ad009d5bf895cbb74fc0d72b8 250 PRINTS PR01217 Proline rich extensin signature 1 17 1.5E-11 T 12-10-2018 Acife_1938 0f56207629b290eaaabd98b4571f291e 809 Pfam PF08401 Domain of unknown function (DUF1738) 24 142 1.4E-25 T 12-10-2018 IPR013610 Domain of unknown function DUF1738 Acife_3235 4a1829c3fff1ec81d292eb78c4500581 132 Pfam PF04138 GtrA-like protein 12 129 1.5E-22 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 Acife_1662 fb5184d15141c92e52e9c8434fc1dc5c 84 Pfam PF04319 NifZ domain 6 76 2.9E-25 T 12-10-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 Acife_2784 82a893f89755d1af9dcdcffa42a59a08 253 Pfam PF12697 Alpha/beta hydrolase family 14 245 1.4E-21 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Acife_2784 82a893f89755d1af9dcdcffa42a59a08 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 3.0E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Acife_2784 82a893f89755d1af9dcdcffa42a59a08 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 93 3.0E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Acife_2784 82a893f89755d1af9dcdcffa42a59a08 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 37 52 3.0E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Acife_2784 82a893f89755d1af9dcdcffa42a59a08 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 198 212 3.0E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Acife_2784 82a893f89755d1af9dcdcffa42a59a08 253 Gene3D G3DSA:3.40.50.1820 4 252 2.3E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_2784 82a893f89755d1af9dcdcffa42a59a08 253 SUPERFAMILY SSF53474 4 250 3.19E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Acife_1736 48ba94fa450fd536c4c2132666b6007e 326 Pfam PF14279 HNH endonuclease 39 91 2.1E-8 T 12-10-2018 IPR029471 HNH endonuclease 5 Acife_3279 a2f9b1816a17917bfd746ddda74f0c5c 68 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 21 53 1.0E-7 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Acife_1424 04d1bc41dc5ab2c80867b5cbf37d6caa 290 SMART SM00244 21 183 1.2E-28 T 12-10-2018 IPR001107 Band 7 domain Acife_1424 04d1bc41dc5ab2c80867b5cbf37d6caa 290 Pfam PF01145 SPFH domain / Band 7 family 25 199 7.1E-28 T 12-10-2018 IPR001107 Band 7 domain Acife_1424 04d1bc41dc5ab2c80867b5cbf37d6caa 290 SUPERFAMILY SSF117892 53 189 2.62E-24 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily Acife_1424 04d1bc41dc5ab2c80867b5cbf37d6caa 290 PIRSF PIRSF005651 1 289 4.7E-90 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Acife_1424 04d1bc41dc5ab2c80867b5cbf37d6caa 290 Gene3D G3DSA:3.30.479.30 50 185 1.4E-17 T 12-10-2018 Acife_1424 04d1bc41dc5ab2c80867b5cbf37d6caa 290 TIGRFAM TIGR01932 hflC: HflC protein 140 281 6.6E-45 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Acife_0430 771ea61f57ccf8949376f7d96dba5017 110 Pfam PF01927 Mut7-C RNAse domain 2 65 7.7E-6 T 12-10-2018 IPR002782 Mut7-C RNAse domain Acife_2194 003566bfa96852c37c0847afc138d9a5 165 Pfam PF02674 Colicin V production protein 5 142 7.4E-27 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Acife_0028 f7063fb4cff731944cffe6eebf16639f 122 Gene3D G3DSA:3.40.30.10 2 115 2.8E-38 T 12-10-2018 Acife_0028 f7063fb4cff731944cffe6eebf16639f 122 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 107 1.7E-26 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR Acife_0028 f7063fb4cff731944cffe6eebf16639f 122 SUPERFAMILY SSF52833 2 115 1.14E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0028 f7063fb4cff731944cffe6eebf16639f 122 Pfam PF03960 ArsC family 54 113 3.7E-14 T 12-10-2018 IPR006660 Arsenate reductase-like Acife_2634 2791dd5fb77ae7e920e6a61d90ecdc50 153 Gene3D G3DSA:3.40.50.2300 20 137 2.6E-8 T 12-10-2018 Acife_1934 b673a294e400deb97ce0c8fb2945f750 121 Pfam PF13488 Glycine zipper 39 80 1.6E-9 T 12-10-2018 IPR039567 Glycine zipper domain Acife_2259 b8618bd1e79b3119e38130e69aaa37c8 246 Gene3D G3DSA:3.30.2010.10 140 234 3.5E-14 T 12-10-2018 Acife_2259 b8618bd1e79b3119e38130e69aaa37c8 246 Pfam PF01863 Protein of unknown function DUF45 27 231 1.9E-56 T 12-10-2018 IPR002725 Protein of unknown function DUF45 Acife_2790 77179461677c4e2651e909f307b84048 302 PIRSF PIRSF026649 7 302 2.4E-82 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Acife_2790 77179461677c4e2651e909f307b84048 302 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 292 1.5E-57 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Acife_3266 6a05290619b26208119011957ee1ebc7 104 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 40 2.1E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Acife_3266 6a05290619b26208119011957ee1ebc7 104 SUPERFAMILY SSF57652 56 102 1.83E-11 T 12-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 Acife_3266 6a05290619b26208119011957ee1ebc7 104 Gene3D G3DSA:4.10.490.10 52 102 1.0E-13 T 12-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 Acife_0760 9be0053ba317b7351de9ac50b04bb99a 320 SUPERFAMILY SSF52833 148 320 3.71E-33 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Acife_0760 9be0053ba317b7351de9ac50b04bb99a 320 Pfam PF00578 AhpC/TSA family 151 296 1.4E-31 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Acife_0760 9be0053ba317b7351de9ac50b04bb99a 320 Gene3D G3DSA:3.40.30.10 143 316 1.0E-37 T 12-10-2018 Acife_0655 5e4f151e7b63321ef599f2161c6148b2 66 Pfam PF13318 Protein of unknown function (DUF4089) 16 64 2.8E-13 T 12-10-2018 IPR025148 Protein of unknown function DUF4089 Acife_0968 c56241ced2bae618d7cf24f7fb2f19f9 313 Gene3D G3DSA:3.40.1190.20 1 313 5.9E-106 T 12-10-2018 IPR029056 Ribokinase-like Acife_0968 c56241ced2bae618d7cf24f7fb2f19f9 313 SUPERFAMILY SSF53613 3 298 2.34E-64 T 12-10-2018 IPR029056 Ribokinase-like Acife_0968 c56241ced2bae618d7cf24f7fb2f19f9 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Acife_0968 c56241ced2bae618d7cf24f7fb2f19f9 313 Pfam PF00294 pfkB family carbohydrate kinase 35 292 2.7E-36 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Acife_1320 99db8ab00bcaa81902e6cb47fe589ef6 221 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 6 200 1.2E-20 T 12-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 Acife_1966 3723471afa82e85d8e176092fb54fe8b 243 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_2610 4c08b9bd6ebb85975b42b4f2951ac0b9 87 Pfam PF14373 Superinfection immunity protein 26 67 5.5E-16 T 12-10-2018 IPR016410 Bacteriophage-associated immunity protein Acife_1983 1036f96393c69683016b4fac9ee700cb 116 Pfam PF05717 IS66 Orf2 like protein 9 104 7.1E-34 T 12-10-2018 IPR008878 Transposase IS66, Orf2 Acife_1063 c4acfe97dc0ca19303d58a68fddfe0eb 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 83 192 8.8E-27 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Acife_2479 7025054c4c76666f0c55b1b2c1d86e0f 110 Gene3D G3DSA:3.40.250.10 4 105 2.9E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_2479 7025054c4c76666f0c55b1b2c1d86e0f 110 Pfam PF00581 Rhodanese-like domain 8 99 1.2E-15 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_2479 7025054c4c76666f0c55b1b2c1d86e0f 110 SUPERFAMILY SSF52821 2 107 1.11E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_2479 7025054c4c76666f0c55b1b2c1d86e0f 110 SMART SM00450 8 103 4.1E-21 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_1566 49665f4f971810afa12920b3673b5ebe 139 Pfam PF13470 PIN domain 2 114 4.1E-17 T 12-10-2018 IPR002716 PIN domain Acife_1566 49665f4f971810afa12920b3673b5ebe 139 SMART SM00670 1 117 5.8E-13 T 12-10-2018 IPR002716 PIN domain Acife_1566 49665f4f971810afa12920b3673b5ebe 139 SUPERFAMILY SSF88723 1 115 9.53E-14 T 12-10-2018 IPR029060 PIN-like domain superfamily Acife_1566 49665f4f971810afa12920b3673b5ebe 139 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 2 113 4.9E-15 T 12-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component Acife_1876 e880392bcf80d37041b7bea6f8629311 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 251 277 1.0E-23 T 12-10-2018 Acife_1876 e880392bcf80d37041b7bea6f8629311 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 161 182 1.0E-23 T 12-10-2018 Acife_1876 e880392bcf80d37041b7bea6f8629311 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 114 134 1.0E-23 T 12-10-2018 Acife_1876 e880392bcf80d37041b7bea6f8629311 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 1.0E-23 T 12-10-2018 Acife_1876 e880392bcf80d37041b7bea6f8629311 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 86 111 1.0E-23 T 12-10-2018 Acife_1876 e880392bcf80d37041b7bea6f8629311 548 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 229 250 1.0E-23 T 12-10-2018 Acife_1876 e880392bcf80d37041b7bea6f8629311 548 Pfam PF00361 Proton-conducting membrane transporter 138 358 1.4E-35 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_1876 e880392bcf80d37041b7bea6f8629311 548 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 78 124 2.2E-7 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Acife_2570 c2240195df7737d9e07d3fef7f66d242 280 Gene3D G3DSA:3.40.50.300 8 211 3.5E-25 T 12-10-2018 Acife_2570 c2240195df7737d9e07d3fef7f66d242 280 SUPERFAMILY SSF52540 13 245 3.51E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1616 c21e8d7595a0e28618c8b778214dfc1a 164 SUPERFAMILY SSF48452 34 147 6.07E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1616 c21e8d7595a0e28618c8b778214dfc1a 164 Gene3D G3DSA:1.25.40.10 15 161 3.4E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_0576 29de069d8735819579526aa9e210801b 370 SMART SM01204 198 338 1.2E-4 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Acife_3083 c17d4a038d65ea329bb63ef507b23216 392 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 53 392 2.1E-53 T 12-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 Acife_2059 65f45c6298feb6d1cee77e2f371f69b8 89 SUPERFAMILY SSF47598 31 72 3.56E-5 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Acife_1375 0a3922f27213f5b6fe6f3315da9462af 274 SUPERFAMILY SSF117782 165 253 1.44E-13 T 12-10-2018 IPR035439 UPF0145 domain superfamily Acife_1375 0a3922f27213f5b6fe6f3315da9462af 274 Pfam PF01906 Putative heavy-metal-binding 168 252 2.3E-10 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 Acife_1375 0a3922f27213f5b6fe6f3315da9462af 274 Pfam PF01906 Putative heavy-metal-binding 73 129 9.1E-10 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 Acife_1375 0a3922f27213f5b6fe6f3315da9462af 274 SUPERFAMILY SSF117782 46 131 3.14E-15 T 12-10-2018 IPR035439 UPF0145 domain superfamily Acife_1375 0a3922f27213f5b6fe6f3315da9462af 274 Gene3D G3DSA:3.30.110.70 43 133 3.3E-12 T 12-10-2018 Acife_1375 0a3922f27213f5b6fe6f3315da9462af 274 Gene3D G3DSA:3.30.110.70 162 256 6.3E-12 T 12-10-2018 Acife_0880 5da23bf353acd72547be6a8d06f29e7b 287 Gene3D G3DSA:3.40.50.300 8 210 3.7E-24 T 12-10-2018 Acife_0880 5da23bf353acd72547be6a8d06f29e7b 287 SUPERFAMILY SSF52540 8 243 6.17E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_0124 5ce8865cf56287dd07503d32ccb6061e 569 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 85 245 1.8E-16 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Acife_0769 ef1a45a9b3a30dddc20e32776b5f7347 95 Pfam PF10048 Predicted integral membrane protein (DUF2282) 43 91 7.8E-17 T 12-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane Acife_2599 2c40883d52ebfc74f736e6adf2cf4a6a 286 Pfam PF07849 Protein of unknown function (DUF1641) 247 268 3.1E-5 T 12-10-2018 IPR012440 Protein of unknown function DUF1641 Acife_3169 b7976cd43c70f7e6db295e13ca0f99bf 131 Gene3D G3DSA:3.30.420.470 1 129 6.6E-9 T 12-10-2018 Acife_3169 b7976cd43c70f7e6db295e13ca0f99bf 131 Pfam PF13358 DDE superfamily endonuclease 2 127 2.3E-18 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain Acife_0417 577ff5badaa9a99f1fd400a84817ecea 97 Pfam PF07120 Protein of unknown function (DUF1376) 13 84 3.4E-8 T 12-10-2018 IPR010781 Protein of unknown function DUF1376 Acife_2796 3c9ca319029653312c03d81f908ccd4a 367 Gene3D G3DSA:3.40.50.2000 199 357 1.7E-19 T 12-10-2018 Acife_2796 3c9ca319029653312c03d81f908ccd4a 367 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 149 333 3.1E-9 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Acife_2796 3c9ca319029653312c03d81f908ccd4a 367 SUPERFAMILY SSF53756 12 334 4.6E-33 T 12-10-2018 Acife_0459 e45033e172887cc445662cff96e6309f 404 Pfam PF07592 Rhodopirellula transposase DDE domain 92 399 2.9E-146 T 12-10-2018 IPR011518 Transposase, Rhodopirellula-type Acife_0271 0bebf486b845d19e735dc946601390f5 306 Pfam PF07811 TadE-like protein 30 72 1.0E-9 T 12-10-2018 IPR012495 TadE-like Acife_2875 d48cc809007eaa41802278a52ec62145 276 Gene3D G3DSA:3.30.70.1070 179 260 3.8E-7 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Acife_2875 d48cc809007eaa41802278a52ec62145 276 Pfam PF05036 Sporulation related domain 184 254 1.8E-11 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Acife_2875 d48cc809007eaa41802278a52ec62145 276 SUPERFAMILY SSF110997 186 256 4.18E-12 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Acife_3202 b7ef71f59c6b52ff9c461e2b31c7d376 151 Gene3D G3DSA:2.40.128.640 36 144 3.1E-28 T 12-10-2018 Acife_3202 b7ef71f59c6b52ff9c461e2b31c7d376 151 Pfam PF04170 NlpE N-terminal domain 49 132 3.2E-21 T 12-10-2018 IPR007298 Copper resistance lipoprotein NlpE Acife_0305 0ccc187f2cc5616be2fecb7da3b0ac05 330 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 42 314 2.5E-40 T 12-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system Acife_0517 37dfe639b7e78d78d6680f63d7a00207 564 SUPERFAMILY SSF53098 368 510 1.74E-10 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Acife_0517 37dfe639b7e78d78d6680f63d7a00207 564 Pfam PF01609 Transposase DDE domain 225 497 3.1E-13 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Acife_2804 8d1bea49c6d0583d9fcc682b84efe32e 159 Pfam PF05258 Protein of unknown function (DUF721) 15 84 1.7E-5 T 12-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 Acife_1231 50125516f2623b336df7a7291623eab0 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 257 4.4E-75 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Acife_1231 50125516f2623b336df7a7291623eab0 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 11 254 5.6E-72 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Acife_1231 50125516f2623b336df7a7291623eab0 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 259 18.653 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Acife_1899 0b35ef01cba1ca08c103264267dcd8bf 273 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 30 242 6.5E-45 T 12-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ Acife_0931 3bce0b0861be4419bb09054f643f9844 206 Pfam PF01618 MotA/TolQ/ExbB proton channel family 70 190 9.7E-37 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Acife_1269 3f95bceabf56f13cba7d2cd7171ebb51 347 Gene3D G3DSA:1.10.600.10 8 334 2.5E-98 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Acife_1269 3f95bceabf56f13cba7d2cd7171ebb51 347 Pfam PF00494 Squalene/phytoene synthase 17 307 3.4E-52 T 12-10-2018 Acife_1269 3f95bceabf56f13cba7d2cd7171ebb51 347 SUPERFAMILY SSF48576 9 322 2.3E-56 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Acife_1269 3f95bceabf56f13cba7d2cd7171ebb51 347 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 156 171 - T 12-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Acife_3073 3e5fb9a19f22edd385551bc31623754e 133 Gene3D G3DSA:1.10.260.40 10 84 3.0E-5 T 12-10-2018 Acife_0149 39074679e282acc5ebfef992e171ac85 218 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 10 205 6.1E-54 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Acife_0149 39074679e282acc5ebfef992e171ac85 218 Pfam PF01914 MarC family integral membrane protein 9 208 1.5E-53 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Acife_1601 f564051eafb923023fa4f497cfba9059 257 Pfam PF04338 Protein of unknown function, DUF481 50 257 2.5E-28 T 12-10-2018 IPR007433 Protein of unknown function DUF481 Acife_0076 bb3baa6d31956cf10ac4685ed69e1533 254 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 44 210 2.4E-20 T 12-10-2018 IPR003734 Domain of unknown function DUF155 Acife_2212 dc12e5ea39c737affd9dbdf0f66c1ba5 273 Hamap MF_00055 MEMO1 family protein . 3 266 48.516 T 12-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 Acife_2212 dc12e5ea39c737affd9dbdf0f66c1ba5 273 Gene3D G3DSA:3.40.830.10 3 266 5.2E-63 T 12-10-2018 Acife_2212 dc12e5ea39c737affd9dbdf0f66c1ba5 273 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 5 265 4.8E-80 T 12-10-2018 Acife_2212 dc12e5ea39c737affd9dbdf0f66c1ba5 273 Pfam PF01875 Memo-like protein 7 263 8.4E-50 T 12-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 Acife_1660 ed10d1dd69c69a996db94782612f7c54 263 Pfam PF05484 LRV protein FeS4 cluster 7 57 3.2E-20 T 12-10-2018 IPR008665 LRV FeS4 cluster Acife_1660 ed10d1dd69c69a996db94782612f7c54 263 Gene3D G3DSA:1.25.10.10 8 246 2.4E-72 T 12-10-2018 IPR011989 Armadillo-like helical Acife_1660 ed10d1dd69c69a996db94782612f7c54 263 Pfam PF01816 Leucine rich repeat variant 139 160 1.7E-4 T 12-10-2018 IPR004830 Leucine rich repeat variant Acife_1660 ed10d1dd69c69a996db94782612f7c54 263 SUPERFAMILY SSF48371 27 220 7.09E-42 T 12-10-2018 IPR016024 Armadillo-type fold Acife_1589 b86966ddf004c8075ab6b9cc2c7693fd 542 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 189 522 1.3E-76 T 12-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 Acife_1589 b86966ddf004c8075ab6b9cc2c7693fd 542 PRINTS PR01441 Cellulose synthase subunit C signature 388 412 1.9E-11 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 Acife_1589 b86966ddf004c8075ab6b9cc2c7693fd 542 PRINTS PR01441 Cellulose synthase subunit C signature 429 450 1.9E-11 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 Acife_2071 53f4e6a94887cf3f37c43138c3fc9500 137 Pfam PF04343 Protein of unknown function, DUF488 22 126 1.5E-25 T 12-10-2018 IPR007438 Protein of unknown function DUF488 Acife_0715 105da7b5ddee1e0f35f415e3e170367e 228 Gene3D G3DSA:3.40.50.300 1 170 6.9E-7 T 12-10-2018 Acife_0715 105da7b5ddee1e0f35f415e3e170367e 228 SUPERFAMILY SSF52540 4 188 6.11E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Acife_1883 1942493aed9b99200d13e2a7ae018675 182 Pfam PF03729 Short repeat of unknown function (DUF308) 27 80 1.2E-5 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane Acife_1883 1942493aed9b99200d13e2a7ae018675 182 Pfam PF03729 Short repeat of unknown function (DUF308) 83 148 6.4E-5 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane Acife_1558 26bbb81949553e425ce055612a4a5c4d 164 Gene3D G3DSA:1.25.40.10 69 162 3.0E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Acife_1558 26bbb81949553e425ce055612a4a5c4d 164 Pfam PF08238 Sel1 repeat 115 150 7.3E-8 T 12-10-2018 IPR006597 Sel1-like repeat Acife_1558 26bbb81949553e425ce055612a4a5c4d 164 Pfam PF08238 Sel1 repeat 102 114 8.7 T 12-10-2018 IPR006597 Sel1-like repeat Acife_1558 26bbb81949553e425ce055612a4a5c4d 164 SMART SM00671 83 114 30.0 T 12-10-2018 IPR006597 Sel1-like repeat Acife_1558 26bbb81949553e425ce055612a4a5c4d 164 SMART SM00671 115 150 4.7E-7 T 12-10-2018 IPR006597 Sel1-like repeat Acife_1558 26bbb81949553e425ce055612a4a5c4d 164 SUPERFAMILY SSF81901 66 155 6.93E-16 T 12-10-2018 Acife_0285 3d333d1202787e684299483292033ed1 116 Pfam PF02643 Uncharacterized ACR, COG1430 17 113 4.8E-17 T 12-10-2018 IPR003795 Protein of unknown function DUF192 Acife_0285 3d333d1202787e684299483292033ed1 116 Gene3D G3DSA:2.60.120.1140 3 116 6.6E-9 T 12-10-2018 IPR038695 Saro_0823-like superfamily Acife_1262 bc7a27122d26945e97066728d7bc531c 221 Gene3D G3DSA:3.40.50.10610 30 219 2.3E-27 T 12-10-2018 Acife_1262 bc7a27122d26945e97066728d7bc531c 221 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 43 204 8.2E-17 T 12-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component Acife_1262 bc7a27122d26945e97066728d7bc531c 221 SUPERFAMILY SSF159594 37 211 3.4E-31 T 12-10-2018 Acife_1870 f98c6d79f8897ba722ea058181297847 183 Gene3D G3DSA:2.60.40.420 42 179 1.2E-15 T 12-10-2018 IPR008972 Cupredoxin Acife_1870 f98c6d79f8897ba722ea058181297847 183 SUPERFAMILY SSF49503 53 177 3.52E-13 T 12-10-2018 IPR008972 Cupredoxin Acife_1462 1ac39a5950497cc402dd3380031728e0 177 Pfam PF01814 Hemerythrin HHE cation binding domain 14 149 9.4E-13 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Acife_1462 1ac39a5950497cc402dd3380031728e0 177 Gene3D G3DSA:1.20.120.520 1 170 4.4E-36 T 12-10-2018 Acife_1131 3804ac287510f25d49bf07b029ad35a9 351 Pfam PF01594 AI-2E family transporter 18 341 2.5E-42 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like Acife_1377 62e6911d10873154169e876c73ebe366 190 Pfam PF07799 Protein of unknown function (DUF1643) 29 172 3.9E-16 T 12-10-2018 IPR012441 Protein of unknown function DUF1643 Acife_2786 6f6ce6033a5018d3b75d70d392a25fe8 237 SUPERFAMILY SSF53271 62 236 1.04E-27 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Acife_2786 6f6ce6033a5018d3b75d70d392a25fe8 237 Gene3D G3DSA:3.40.50.2020 123 236 4.0E-15 T 12-10-2018 Acife_1850 e22d368baddd1b253ef03b3bcfa6721d 616 Pfam PF05140 ResB-like family 25 594 2.4E-122 T 12-10-2018 IPR007816 ResB-like domain Acife_0317 f029cfcf068b7ae6f6c1ca270afb4fe6 236 Gene3D G3DSA:3.40.50.1360 1 229 1.7E-64 T 12-10-2018 Acife_0317 f029cfcf068b7ae6f6c1ca270afb4fe6 236 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 15 216 5.2E-61 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Acife_0317 f029cfcf068b7ae6f6c1ca270afb4fe6 236 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 13 214 7.5E-52 T 12-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 Acife_0317 f029cfcf068b7ae6f6c1ca270afb4fe6 236 SUPERFAMILY SSF100950 9 222 5.09E-55 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Acife_1583 5419c02a79cb1baf7ad64fa779367b9b 317 Pfam PF07238 PilZ domain 197 291 4.5E-5 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Acife_2303 e5d2ab17ebe2502aaafe5cde67210022 611 Pfam PF07510 Protein of unknown function (DUF1524) 438 598 3.4E-20 T 12-10-2018 IPR011089 Domain of unknown function DUF1524 Acife_2303 e5d2ab17ebe2502aaafe5cde67210022 611 Pfam PF03235 Protein of unknown function DUF262 17 235 5.3E-39 T 12-10-2018 IPR004919 Domain of unknown function DUF262 Acife_2265 e0550993d0d712d7928c0aab4595ba2c 151 Pfam PF09969 Uncharacterized conserved protein (DUF2203) 24 131 1.6E-20 T 12-10-2018 IPR018699 Protein of unknown function DUF2203 Acife_2415 d0e41679a198a56c2a5e918a21a73b4f 141 Gene3D G3DSA:3.40.250.10 26 141 4.5E-33 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_2415 d0e41679a198a56c2a5e918a21a73b4f 141 SMART SM00450 41 138 9.7E-28 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_2415 d0e41679a198a56c2a5e918a21a73b4f 141 SUPERFAMILY SSF52821 20 141 3.01E-37 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Acife_2415 d0e41679a198a56c2a5e918a21a73b4f 141 Pfam PF00581 Rhodanese-like domain 46 134 3.6E-21 T 12-10-2018 IPR001763 Rhodanese-like domain Acife_1376 87f5eaf96497b1a60d86857e2f06f915 244 Pfam PF04012 PspA/IM30 family 2 230 3.1E-25 T 12-10-2018 IPR007157 PspA/IM30 Acife_0583 b815d7281a02a58ad5c2abb56b3f8a3d 148 Pfam PF08897 Domain of unknown function (DUF1841) 7 139 4.2E-46 T 12-10-2018 IPR014993 Protein of unknown function DUF1841 Acife_2187 655ad0477d93a2435c130dcb55bd4b77 111 Pfam PF02699 Preprotein translocase subunit 24 99 2.8E-26 T 12-10-2018 IPR003849 Preprotein translocase YajC Acife_2187 655ad0477d93a2435c130dcb55bd4b77 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 100 3.6E-25 T 12-10-2018 IPR003849 Preprotein translocase YajC Acife_2187 655ad0477d93a2435c130dcb55bd4b77 111 SMART SM01323 21 103 6.4E-37 T 12-10-2018 IPR003849 Preprotein translocase YajC Acife_2187 655ad0477d93a2435c130dcb55bd4b77 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 43 2.8E-15 T 12-10-2018 IPR003849 Preprotein translocase YajC Acife_2187 655ad0477d93a2435c130dcb55bd4b77 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 61 79 2.8E-15 T 12-10-2018 IPR003849 Preprotein translocase YajC Acife_2397 0d1735544d70309e971696707a72b82b 253 Pfam PF01925 Sulfite exporter TauE/SafE 25 250 2.6E-30 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Acife_1942 d2867820a4f7716e27e2fb4d076998e7 190 SUPERFAMILY SSF53955 15 130 5.28E-13 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Acife_1942 d2867820a4f7716e27e2fb4d076998e7 190 Gene3D G3DSA:1.10.530.10 8 148 1.8E-9 T 12-10-2018 Acife_1942 d2867820a4f7716e27e2fb4d076998e7 190 Pfam PF01464 Transglycosylase SLT domain 8 132 2.5E-14 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Acife_2972 76727b76637125f83ddcaaeec8f9c5d1 539 Pfam PF06122 Conjugative relaxosome accessory transposon protein 40 467 6.5E-52 T 12-10-2018 IPR010927 Type IV conjugative transfer system protein TraH Acife_3143 55472d3d1cf0deedac77a3a676f09910 766 Pfam PF12288 Carboxysome shell peptide mid-region 157 578 2.5E-153 T 12-10-2018 IPR020990 Carboxysome shell protein Acife_0308 bbc3467ce193e511eaa3d9dfa3db728f 430 Pfam PF04286 Protein of unknown function (DUF445) 49 424 3.8E-97 T 12-10-2018 IPR007383 Protein of unknown function DUF445 Acife_2032 44269a48d2436e23d3c484a36dab5b2b 219 Pfam PF02163 Peptidase family M50 142 194 1.4E-6 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Acife_0342 e4e8cfc8efddaf3dfa7618262b8ee825 96 Pfam PF05717 IS66 Orf2 like protein 8 65 5.5E-22 T 12-10-2018 IPR008878 Transposase IS66, Orf2 Acife_1052 c3d58b260a10144162ca631ae1592776 118 Pfam PF12732 YtxH-like protein 17 90 1.2E-15 T 12-10-2018 IPR024623 Uncharacterised protein family YtxH Acife_2475 c94a8f542fed9d995f5905611f773153 447 Pfam PF02754 Cysteine-rich domain 253 352 3.1E-7 T 12-10-2018 IPR004017 Cysteine-rich domain Acife_1162 42471d5ae7517e49c67eb75f1c1e854b 259 Pfam PF13701 Transposase DDE domain group 1 2 213 3.6E-7 T 12-10-2018 IPR025668 Transposase DDE domain Acife_3089 f6fd4d8b1b8eedddc3fd34c3413c0f90 70 Pfam PF11127 Protein of unknown function (DUF2892) 1 64 2.2E-22 T 12-10-2018 IPR021309 Protein of unknown function DUF2892 Acife_0929 effffd58fe4334aed8e4a5eb4018cf68 186 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 174 9.4E-30 T 12-10-2018 IPR018639 Domain of unknown function DUF2062 Acife_3216 60bbfa3e5a8e267f9b64dbf47c89fa08 86 Pfam PF13711 Domain of unknown function (DUF4160) 9 71 1.4E-21 T 12-10-2018 IPR025427 Protein of unknown function DUF4160 Acife_3136 c0a0e0889d1cd55dcaf46e355413cb65 92 SUPERFAMILY SSF55248 18 75 4.45E-8 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Acife_3136 c0a0e0889d1cd55dcaf46e355413cb65 92 Gene3D G3DSA:3.30.1360.20 13 90 1.6E-25 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Acife_0486 2fef039d35b3542e703d854b0eb07b12 235 Pfam PF02308 MgtC family 16 136 5.5E-36 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Acife_0486 2fef039d35b3542e703d854b0eb07b12 235 PRINTS PR01837 MgtC/SapB protein signature 19 38 1.5E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Acife_0486 2fef039d35b3542e703d854b0eb07b12 235 PRINTS PR01837 MgtC/SapB protein signature 91 115 1.5E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Acife_0486 2fef039d35b3542e703d854b0eb07b12 235 PRINTS PR01837 MgtC/SapB protein signature 64 86 1.5E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Acife_0486 2fef039d35b3542e703d854b0eb07b12 235 PRINTS PR01837 MgtC/SapB protein signature 38 56 1.5E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Acife_3207 0791e07439860ed472ce713c965958c6 299 Pfam PF01544 CorA-like Mg2+ transporter protein 100 286 7.8E-15 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Acife_0720 d999f46cc1205535fde65950827f7566 502 Pfam PF07804 HipA-like C-terminal domain 232 411 4.5E-19 T 12-10-2018 IPR012893 HipA-like, C-terminal Acife_0438 f370e61aba54e89a9be649c1988bcb89 889 Pfam PF08401 Domain of unknown function (DUF1738) 16 139 5.6E-21 T 12-10-2018 IPR013610 Domain of unknown function DUF1738 Acife_0903 82f7a25319adf990f91c94ed6fb90ae1 229 Pfam PF13707 RloB-like protein 32 221 3.5E-33 T 12-10-2018 IPR025591 RloB-like protein Acife_0966 a58d1aa4b88f2904e0aab4c59200a352 150 Pfam PF10116 Protein required for attachment to host cells 7 144 7.8E-41 T 12-10-2018 IPR019291 Host attachment protein Acife_2021 ef7ffd44f122996d1fe5a7c31184d09c 185 Pfam PF03729 Short repeat of unknown function (DUF308) 27 92 9.9E-6 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane Acife_2021 ef7ffd44f122996d1fe5a7c31184d09c 185 Pfam PF03729 Short repeat of unknown function (DUF308) 82 148 1.3E-4 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane Acife_1967 c03b173beeba02a0a39f7b72faedaa72 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 34 5.0E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Acife_1472 31584d69d93fdfc9b1dcc58849b1277c 182 Pfam PF11066 Protein of unknown function (DUF2867) 20 168 5.9E-37 T 12-10-2018 IPR021295 Protein of unknown function DUF2867 Acife_2254 5fcfa5b1f2c0e46a6eacc587522696b9 116 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 104 5.1E-23 T 12-10-2018 IPR009241 Toxin HigB-like