locus-tag class description H2515_00005 PF08299 Bacterial dnaA protein helix-turn-helix H2515_00005 PF00308 Bacterial dnaA protein H2515_00005 PF11638 DnaA N-terminal domain H2515_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain H2515_00010 PF02767 DNA polymerase III beta subunit, central domain H2515_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain H2515_00015 PF02463 RecF/RecN/SMC N terminal domain H2515_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_00020 PF01751 Toprim domain H2515_00020 PF00204 DNA gyrase B H2515_00020 PF00986 DNA gyrase B subunit, carboxyl terminus H2515_00020 PF18053 DNA gyrase B subunit insert domain H2515_00035 PF03776 Septum formation topological specificity factor MinE H2515_00040 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H2515_00045 PF03775 Septum formation inhibitor MinC, C-terminal domain H2515_00045 PF05209 Septum formation inhibitor MinC, N-terminal domain H2515_00050 PF00037 4Fe-4S binding domain H2515_00050 PF11953 Domain of unknown function (DUF3470) H2515_00055 PF13368 Topoisomerase C-terminal repeat H2515_00055 PF01751 Toprim domain H2515_00055 PF01131 DNA topoisomerase H2515_00060 PF04361 Protein of unknown function (DUF494) H2515_00065 PF02481 DNA recombination-mediator protein A H2515_00065 PF17782 DprA winged helix domain H2515_00070 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H2515_00070 PF01476 LysM domain H2515_00075 PF01327 Polypeptide deformylase H2515_00080 PF02911 Formyl transferase, C-terminal domain H2515_00080 PF00551 Formyl transferase H2515_00085 PF01189 16S rRNA methyltransferase RsmB/F H2515_00085 PF01029 NusB family H2515_00095 PF00989 PAS fold H2515_00095 PF00512 His Kinase A (phospho-acceptor) domain H2515_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_00095 PF00672 HAMP domain H2515_00100 PF00072 Response regulator receiver domain H2515_00100 PF02954 Bacterial regulatory protein, Fis family H2515_00100 PF00158 Sigma-54 interaction domain H2515_00115 PF00672 HAMP domain H2515_00115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H2515_00120 PF06165 Glycosyltransferase family 36 H2515_00120 PF10091 Putative glucoamylase H2515_00120 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain H2515_00130 PF03707 Bacterial signalling protein N terminal repeat H2515_00130 PF00990 Diguanylate cyclase, GGDEF domain H2515_00130 PF00563 EAL domain H2515_00135 PF03960 ArsC family H2515_00155 PF18693 TRAM domain H2515_00155 PF04055 Radical SAM superfamily H2515_00155 PF00919 Uncharacterized protein family UPF0004 H2515_00160 PF02152 Dihydroneopterin aldolase H2515_00165 PF02660 Glycerol-3-phosphate acyltransferase H2515_00170 PF00814 Glycoprotease family H2515_00175 PF04305 Protein of unknown function (DUF455) H2515_00180 PF13570 PQQ-like domain H2515_00180 PF13360 PQQ-like domain H2515_00180 PF01011 PQQ enzyme repeat H2515_00185 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system H2515_00190 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system H2515_00220 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) H2515_00250 PF00873 AcrB/AcrD/AcrF family H2515_00265 PF00486 Transcriptional regulatory protein, C terminal H2515_00265 PF00072 Response regulator receiver domain H2515_00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_00270 PF00672 HAMP domain H2515_00270 PF00512 His Kinase A (phospho-acceptor) domain H2515_00275 PF01566 Natural resistance-associated macrophage protein H2515_00280 PF04012 PspA/IM30 family H2515_00285 PF01906 Putative heavy-metal-binding H2515_00310 PF00005 ABC transporter H2515_00315 PF00528 Binding-protein-dependent transport system inner membrane component H2515_00320 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H2515_00340 PF11953 Domain of unknown function (DUF3470) H2515_00340 PF00037 4Fe-4S binding domain H2515_00355 PF00890 FAD binding domain H2515_00355 PF02910 Fumarate reductase flavoprotein C-term H2515_00360 PF07702 UTRA domain H2515_00360 PF00392 Bacterial regulatory proteins, gntR family H2515_00370 PF04055 Radical SAM superfamily H2515_00370 PF06969 HemN C-terminal domain H2515_00375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2515_00375 PF03466 LysR substrate binding domain H2515_00385 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H2515_00395 PF02913 FAD linked oxidases, C-terminal domain H2515_00395 PF01565 FAD binding domain H2515_00400 PF13580 SIS domain H2515_00405 PF02021 Uncharacterised protein family UPF0102 H2515_00410 PF04348 LppC putative lipoprotein H2515_00415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H2515_00425 PF00034 Cytochrome c H2515_00425 PF03150 Di-haem cytochrome c peroxidase H2515_00435 PF01578 Cytochrome C assembly protein H2515_00440 PF00313 'Cold-shock' DNA-binding domain H2515_00450 PF03707 Bacterial signalling protein N terminal repeat H2515_00450 PF00990 Diguanylate cyclase, GGDEF domain H2515_00450 PF00563 EAL domain H2515_00455 PF10150 Ribonuclease E/G family H2515_00455 PF00575 S1 RNA binding domain H2515_00460 PF02545 Maf-like protein H2515_00475 PF02590 Predicted SPOUT methyltransferase H2515_00485 PF01467 Cytidylyltransferase-like H2515_00495 PF01625 Peptide methionine sulfoxide reductase H2515_00500 PF01641 SelR domain H2515_00510 PF04349 Periplasmic glucan biosynthesis protein, MdoG H2515_00525 PF01618 MotA/TolQ/ExbB proton channel family H2515_00530 PF02472 Biopolymer transport protein ExbD/TolR H2515_00565 PF00690 Cation transporter/ATPase, N-terminus H2515_00565 PF00689 Cation transporting ATPase, C-terminus H2515_00570 PF13538 UvrD-like helicase C-terminal domain H2515_00575 PF13361 UvrD-like helicase C-terminal domain H2515_00575 PF00580 UvrD/REP helicase N-terminal domain H2515_00575 PF12705 PD-(D/E)XK nuclease superfamily H2515_00580 PF17946 RecC C-terminal domain H2515_00590 PF05114 Protein of unknown function (DUF692) H2515_00600 PF03279 Bacterial lipid A biosynthesis acyltransferase H2515_00625 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H2515_00635 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit H2515_00640 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit H2515_00640 PF00374 Nickel-dependent hydrogenase H2515_00640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit H2515_00645 PF00361 Proton-conducting membrane transporter H2515_00645 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H2515_00690 PF14667 Polysaccharide biosynthesis C-terminal domain H2515_00690 PF01943 Polysaccharide biosynthesis protein H2515_00695 PF00691 OmpA family H2515_00705 PF04055 Radical SAM superfamily H2515_00710 PF06508 Queuosine biosynthesis protein QueC H2515_00715 PF04052 TolB amino-terminal domain H2515_00715 PF07676 WD40-like Beta Propeller Repeat H2515_00725 PF02472 Biopolymer transport protein ExbD/TolR H2515_00730 PF01618 MotA/TolQ/ExbB proton channel family H2515_00735 PF03061 Thioesterase superfamily H2515_00740 PF05491 RuvB C-terminal winged helix domain H2515_00740 PF17864 RuvB AAA lid domain H2515_00740 PF05496 Holliday junction DNA helicase RuvB P-loop domain H2515_00745 PF07499 RuvA, C-terminal domain H2515_00745 PF01330 RuvA N terminal domain H2515_00750 PF02075 Crossover junction endodeoxyribonuclease RuvC H2515_00755 PF01709 Transcriptional regulator H2515_00765 PF02445 Quinolinate synthetase A protein H2515_00770 PF02938 GAD domain H2515_00770 PF01336 OB-fold nucleic acid binding domain H2515_00770 PF00152 tRNA synthetases class II (D, K and N) H2515_00780 PF01914 MarC family integral membrane protein H2515_00790 PF12848 ABC transporter H2515_00790 PF00005 ABC transporter H2515_00795 PF00468 Ribosomal protein L34 H2515_00800 PF00825 Ribonuclease P H2515_00805 PF01809 Putative membrane protein insertion efficiency factor H2515_00810 PF02096 60Kd inner membrane protein H2515_00810 PF14849 YidC periplasmic domain H2515_00815 PF12631 MnmE helical domain H2515_00815 PF01926 50S ribosome-binding GTPase H2515_00815 PF10396 GTP-binding protein TrmE N-terminus H2515_00845 PF01061 ABC-2 type transporter H2515_00850 PF00005 ABC transporter H2515_00855 PF02129 X-Pro dipeptidyl-peptidase (S15 family) H2515_00865 PF03232 Ubiquinone biosynthesis protein COQ7 H2515_00870 PF02082 Transcriptional regulator H2515_00880 PF00218 Indole-3-glycerol phosphate synthase H2515_00885 PF00591 Glycosyl transferase family, a/b domain H2515_00885 PF02885 Glycosyl transferase family, helical bundle domain H2515_00890 PF00117 Glutamine amidotransferase class-I H2515_00955 PF01906 Putative heavy-metal-binding H2515_00975 PF01053 Cys/Met metabolism PLP-dependent enzyme H2515_00980 PF01022 Bacterial regulatory protein, arsR family H2515_00995 PF00873 AcrB/AcrD/AcrF family H2515_01000 PF00266 Aminotransferase class-V H2515_01005 PF08241 Methyltransferase domain H2515_01025 PF01209 ubiE/COQ5 methyltransferase family H2515_01055 PF06122 Conjugative relaxosome accessory transposon protein H2515_01100 PF00436 Single-strand binding protein family H2515_01110 PF01751 Toprim domain H2515_01110 PF01131 DNA topoisomerase H2515_01120 PF07728 AAA domain (dynein-related subfamily) H2515_01120 PF08406 CbbQ/NirQ/NorQ C-terminal H2515_01140 PF02163 Peptidase family M50 H2515_01215 PF13181 Tetratricopeptide repeat H2515_01220 PF00476 DNA polymerase family A H2515_01220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H2515_01220 PF01367 5'-3' exonuclease, C-terminal SAM fold H2515_01235 PF00216 Bacterial DNA-binding protein H2515_01240 PF00216 Bacterial DNA-binding protein H2515_01250 PF01850 PIN domain H2515_01260 PF00271 Helicase conserved C-terminal domain H2515_01260 PF04851 Type III restriction enzyme, res subunit H2515_01260 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) H2515_01260 PF08463 EcoEI R protein C-terminal H2515_01285 PF02899 Phage integrase, N-terminal SAM-like domain H2515_01285 PF00589 Phage integrase family H2515_01325 PF00403 Heavy-metal-associated domain H2515_01340 PF00462 Glutaredoxin H2515_01370 PF01545 Cation efflux family H2515_01375 PF13411 MerR HTH family regulatory protein H2515_01405 PF00873 AcrB/AcrD/AcrF family H2515_01410 PF00529 HlyD membrane-fusion protein of T1SS H2515_01410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2515_01445 PF02371 Transposase IS116/IS110/IS902 family H2515_01445 PF01548 Transposase H2515_01470 PF13495 Phage integrase, N-terminal SAM-like domain H2515_01470 PF00589 Phage integrase family H2515_01475 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) H2515_01475 PF01348 Type II intron maturase H2515_01480 PF08378 Nuclease-related domain H2515_01560 PF09957 Bacterial antitoxin of type II TA system, VapB H2515_01610 PF00437 Type II/IV secretion system protein H2515_01610 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H2515_01715 PF01131 DNA topoisomerase H2515_01715 PF01751 Toprim domain H2515_01715 PF01396 Topoisomerase DNA binding C4 zinc finger H2515_01720 PF00772 DnaB-like helicase N terminal domain H2515_01720 PF03796 DnaB-like helicase C terminal domain H2515_01750 PF00589 Phage integrase family H2515_01750 PF13356 Arm DNA-binding domain H2515_01775 PF00425 chorismate binding enzyme H2515_01775 PF04715 Anthranilate synthase component I, N terminal region H2515_01780 PF13419 Haloacid dehalogenase-like hydrolase H2515_01785 PF00834 Ribulose-phosphate 3 epimerase family H2515_01790 PF01116 Fructose-bisphosphate aldolase class-II H2515_01795 PF00224 Pyruvate kinase, barrel domain H2515_01795 PF02887 Pyruvate kinase, alpha/beta domain H2515_01800 PF00162 Phosphoglycerate kinase H2515_01805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H2515_01805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H2515_01810 PF02780 Transketolase, C-terminal domain H2515_01810 PF02779 Transketolase, pyrimidine binding domain H2515_01810 PF00456 Transketolase, thiamine diphosphate binding domain H2515_01815 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded H2515_01820 PF00459 Inositol monophosphatase family H2515_01830 PF04452 RNA methyltransferase H2515_01835 PF01544 CorA-like Mg2+ transporter protein H2515_01840 PF02401 LytB protein H2515_01845 PF02646 RmuC family H2515_01850 PF01741 Large-conductance mechanosensitive channel, MscL H2515_01860 PF00873 AcrB/AcrD/AcrF family H2515_01865 PF13533 Biotin-lipoyl like H2515_01890 PF01011 PQQ enzyme repeat H2515_01890 PF13360 PQQ-like domain H2515_01920 PF01381 Helix-turn-helix H2515_01940 PF00072 Response regulator receiver domain H2515_01940 PF00486 Transcriptional regulatory protein, C terminal H2515_01945 PF00512 His Kinase A (phospho-acceptor) domain H2515_01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_01945 PF00672 HAMP domain H2515_01955 PF14698 Argininosuccinate lyase C-terminal H2515_01955 PF00206 Lyase H2515_01965 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H2515_01965 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H2515_01970 PF00342 Phosphoglucose isomerase H2515_01975 PF00768 D-alanyl-D-alanine carboxypeptidase H2515_01975 PF07943 Penicillin-binding protein 5, C-terminal domain H2515_01980 PF03358 NADPH-dependent FMN reductase H2515_01985 PF01638 HxlR-like helix-turn-helix H2515_01990 PF04264 YceI-like domain H2515_02010 PF00403 Heavy-metal-associated domain H2515_02015 PF02254 TrkA-N domain H2515_02015 PF07885 Ion channel H2515_02025 PF03330 Lytic transglycolase H2515_02025 PF05036 Sporulation related domain H2515_02040 PF00117 Glutamine amidotransferase class-I H2515_02040 PF00958 GMP synthase C terminal domain H2515_02045 PF00563 EAL domain H2515_02045 PF00990 Diguanylate cyclase, GGDEF domain H2515_02045 PF03707 Bacterial signalling protein N terminal repeat H2515_02050 PF00909 Ammonium Transporter Family H2515_02065 PF00909 Ammonium Transporter Family H2515_02070 PF00543 Nitrogen regulatory protein P-II H2515_02080 PF04293 SpoVR like protein H2515_02085 PF04285 Protein of unknown function (DUF444) H2515_02090 PF00909 Ammonium Transporter Family H2515_02095 PF08298 PrkA AAA domain H2515_02095 PF06798 PrkA serine protein kinase C-terminal domain H2515_02110 PF04168 A predicted alpha-helical domain with a conserved ER motif. H2515_02110 PF14403 Circularly permuted ATP-grasp type 2 H2515_02115 PF14403 Circularly permuted ATP-grasp type 2 H2515_02125 PF00512 His Kinase A (phospho-acceptor) domain H2515_02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_02125 PF00989 PAS fold H2515_02130 PF00072 Response regulator receiver domain H2515_02130 PF00158 Sigma-54 interaction domain H2515_02130 PF02954 Bacterial regulatory protein, Fis family H2515_02140 PF00348 Polyprenyl synthetase H2515_02155 PF03717 Penicillin-binding Protein dimerisation domain H2515_02155 PF00905 Penicillin binding protein transpeptidase domain H2515_02170 PF12848 ABC transporter H2515_02170 PF16326 ABC transporter C-terminal domain H2515_02170 PF00005 ABC transporter H2515_02180 PF03167 Uracil DNA glycosylase superfamily H2515_02200 PF14319 Transposase zinc-binding domain H2515_02200 PF04986 Putative transposase H2515_02255 PF02899 Phage integrase, N-terminal SAM-like domain H2515_02255 PF00589 Phage integrase family H2515_02270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H2515_02270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H2515_02270 PF00205 Thiamine pyrophosphate enzyme, central domain H2515_02285 PF00665 Integrase core domain H2515_02305 PF02390 Putative methyltransferase H2515_02310 PF00731 AIR carboxylase H2515_02315 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H2515_02315 PF02222 ATP-grasp domain H2515_02330 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase H2515_02335 PF01668 SmpB protein H2515_02340 PF13091 PLD-like domain H2515_02345 PF03364 Polyketide cyclase / dehydrase and lipid transport H2515_02350 PF04355 SmpA / OmlA family H2515_02355 PF01475 Ferric uptake regulator family H2515_02360 PF00696 Amino acid kinase family H2515_02360 PF01472 PUA domain H2515_02365 PF01018 GTP1/OBG H2515_02365 PF01926 50S ribosome-binding GTPase H2515_02370 PF01016 Ribosomal L27 protein H2515_02375 PF00829 Ribosomal prokaryotic L21 protein H2515_02380 PF00916 Sulfate permease family H2515_02380 PF01740 STAS domain H2515_02385 PF00484 Carbonic anhydrase H2515_02390 PF08267 Cobalamin-independent synthase, N-terminal domain H2515_02390 PF01717 Cobalamin-independent synthase, Catalytic domain H2515_02395 PF01209 ubiE/COQ5 methyltransferase family H2515_02405 PF07021 Methionine biosynthesis protein MetW H2515_02405 PF00561 alpha/beta hydrolase fold H2515_02410 PF00561 alpha/beta hydrolase fold H2515_02420 PF00464 Serine hydroxymethyltransferase H2515_02425 PF03477 ATP cone domain H2515_02430 PF01872 RibD C-terminal domain H2515_02430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H2515_02435 PF00677 Lumazine binding domain H2515_02440 PF00925 GTP cyclohydrolase II H2515_02440 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H2515_02445 PF00885 6,7-dimethyl-8-ribityllumazine synthase H2515_02450 PF01029 NusB family H2515_02470 PF03109 ABC1 family H2515_02475 PF00691 OmpA family H2515_02475 PF04972 BON domain H2515_02495 PF00009 Elongation factor Tu GTP binding domain H2515_02495 PF03143 Elongation factor Tu C-terminal domain H2515_02495 PF03144 Elongation factor Tu domain 2 H2515_02510 PF02357 Transcription termination factor nusG H2515_02510 PF00467 KOW motif H2515_02515 PF03946 Ribosomal protein L11, N-terminal domain H2515_02515 PF00298 Ribosomal protein L11, RNA binding domain H2515_02520 PF00687 Ribosomal protein L1p/L10e family H2515_02525 PF00466 Ribosomal protein L10 H2515_02530 PF00542 Ribosomal protein L7/L12 C-terminal domain H2515_02530 PF16320 Ribosomal protein L7/L12 dimerisation domain H2515_02535 PF04563 RNA polymerase beta subunit H2515_02535 PF04561 RNA polymerase Rpb2, domain 2 H2515_02535 PF04565 RNA polymerase Rpb2, domain 3 H2515_02535 PF10385 RNA polymerase beta subunit external 1 domain H2515_02535 PF00562 RNA polymerase Rpb2, domain 6 H2515_02535 PF04560 RNA polymerase Rpb2, domain 7 H2515_02540 PF04998 RNA polymerase Rpb1, domain 5 H2515_02540 PF05000 RNA polymerase Rpb1, domain 4 H2515_02540 PF04983 RNA polymerase Rpb1, domain 3 H2515_02540 PF00623 RNA polymerase Rpb1, domain 2 H2515_02540 PF04997 RNA polymerase Rpb1, domain 1 H2515_02545 PF00164 Ribosomal protein S12/S23 H2515_02550 PF00177 Ribosomal protein S7p/S5e H2515_02555 PF03144 Elongation factor Tu domain 2 H2515_02555 PF00009 Elongation factor Tu GTP binding domain H2515_02555 PF03764 Elongation factor G, domain IV H2515_02555 PF14492 Elongation Factor G, domain II H2515_02555 PF00679 Elongation factor G C-terminus H2515_02560 PF00009 Elongation factor Tu GTP binding domain H2515_02560 PF03144 Elongation factor Tu domain 2 H2515_02560 PF03143 Elongation factor Tu C-terminal domain H2515_02565 PF00338 Ribosomal protein S10p/S20e H2515_02570 PF00297 Ribosomal protein L3 H2515_02575 PF00573 Ribosomal protein L4/L1 family H2515_02580 PF00276 Ribosomal protein L23 H2515_02585 PF00181 Ribosomal Proteins L2, RNA binding domain H2515_02585 PF03947 Ribosomal Proteins L2, C-terminal domain H2515_02590 PF00203 Ribosomal protein S19 H2515_02595 PF00237 Ribosomal protein L22p/L17e H2515_02600 PF07650 KH domain H2515_02600 PF00189 Ribosomal protein S3, C-terminal domain H2515_02605 PF00252 Ribosomal protein L16p/L10e H2515_02610 PF00831 Ribosomal L29 protein H2515_02615 PF00366 Ribosomal protein S17 H2515_02620 PF00238 Ribosomal protein L14p/L23e H2515_02625 PF00467 KOW motif H2515_02625 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H2515_02630 PF00673 ribosomal L5P family C-terminus H2515_02630 PF00281 Ribosomal protein L5 H2515_02635 PF00253 Ribosomal protein S14p/S29e H2515_02640 PF00410 Ribosomal protein S8 H2515_02645 PF00347 Ribosomal protein L6 H2515_02650 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H2515_02655 PF00333 Ribosomal protein S5, N-terminal domain H2515_02655 PF03719 Ribosomal protein S5, C-terminal domain H2515_02660 PF00327 Ribosomal protein L30p/L7e H2515_02665 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H2515_02670 PF00344 SecY translocase H2515_02675 PF05191 Adenylate kinase, active site lid H2515_02680 PF01176 Translation initiation factor 1A / IF-1 H2515_02685 PF00444 Ribosomal protein L36 H2515_02690 PF00416 Ribosomal protein S13/S18 H2515_02695 PF00411 Ribosomal protein S11 H2515_02700 PF00163 Ribosomal protein S4/S9 N-terminal domain H2515_02700 PF01479 S4 domain H2515_02705 PF01000 RNA polymerase Rpb3/RpoA insert domain H2515_02705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H2515_02705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H2515_02710 PF01196 Ribosomal protein L17 H2515_02715 PF00692 dUTPase H2515_02720 PF02441 Flavoprotein H2515_02720 PF04127 DNA / pantothenate metabolism flavoprotein H2515_02725 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family H2515_02730 PF05159 Capsule polysaccharide biosynthesis protein H2515_02740 PF00155 Aminotransferase class I and II H2515_02745 PF08659 KR domain H2515_02745 PF16197 Ketoacyl-synthetase C-terminal extension H2515_02745 PF14765 Polyketide synthase dehydratase H2515_02745 PF00109 Beta-ketoacyl synthase, N-terminal domain H2515_02745 PF08240 Alcohol dehydrogenase GroES-like domain H2515_02745 PF00698 Acyl transferase domain H2515_02745 PF00550 Phosphopantetheine attachment site H2515_02745 PF00107 Zinc-binding dehydrogenase H2515_02745 PF02801 Beta-ketoacyl synthase, C-terminal domain H2515_02755 PF02563 Polysaccharide biosynthesis/export protein H2515_02760 PF00483 Nucleotidyl transferase H2515_02760 PF01050 Mannose-6-phosphate isomerase H2515_02775 PF00535 Glycosyl transferase family 2 H2515_02785 PF01527 Transposase H2515_02790 PF00005 ABC transporter H2515_02835 PF16363 GDP-mannose 4,6 dehydratase H2515_02840 PF16363 GDP-mannose 4,6 dehydratase H2515_02845 PF04002 RadC-like JAB domain H2515_02855 PF01569 PAP2 superfamily H2515_02875 PF00156 Phosphoribosyl transferase domain H2515_02880 PF01048 Phosphorylase superfamily H2515_02885 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_02885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H2515_02890 PF08534 Redoxin H2515_02890 PF00462 Glutaredoxin H2515_02895 PF18429 Domain of unknown function (DUF5609) H2515_02900 PF00270 DEAD/DEAH box helicase H2515_02900 PF03461 TRCF domain H2515_02900 PF17757 UvrB interaction domain H2515_02900 PF00271 Helicase conserved C-terminal domain H2515_02900 PF02559 CarD-like/TRCF domain H2515_02905 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H2515_02910 PF02542 YgbB family H2515_02915 PF01142 tRNA pseudouridine synthase D (TruD) H2515_02920 PF13411 MerR HTH family regulatory protein H2515_02930 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_02935 PF09397 Ftsk gamma domain H2515_02935 PF01580 FtsK/SpoIIIE family H2515_02935 PF17854 FtsK alpha domain H2515_02935 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H2515_02940 PF03548 Outer membrane lipoprotein carrier protein LolA H2515_02950 PF12002 MgsA AAA+ ATPase C terminal H2515_02950 PF00004 ATPase family associated with various cellular activities (AAA) H2515_02950 PF16193 AAA C-terminal domain H2515_02955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H2515_02955 PF02403 Seryl-tRNA synthetase N-terminal domain H2515_02965 PF17969 L,D-transpeptidase C-terminal domain H2515_02965 PF03734 L,D-transpeptidase catalytic domain H2515_03000 PF02576 RimP N-terminal domain H2515_03000 PF17384 RimP C-terminal SH3 domain H2515_03005 PF13184 NusA-like KH domain H2515_03005 PF08529 NusA N-terminal domain H2515_03010 PF08364 Bacterial translation initiation factor IF-2 associated region H2515_03010 PF00009 Elongation factor Tu GTP binding domain H2515_03010 PF11987 Translation-initiation factor 2 H2515_03010 PF04760 Translation initiation factor IF-2, N-terminal region H2515_03015 PF02033 Ribosome-binding factor A H2515_03020 PF16198 tRNA pseudouridylate synthase B C-terminal domain H2515_03020 PF01509 TruB family pseudouridylate synthase (N terminal domain) H2515_03020 PF09157 Pseudouridine synthase II TruB, C-terminal H2515_03025 PF00312 Ribosomal protein S15 H2515_03030 PF00575 S1 RNA binding domain H2515_03030 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H2515_03030 PF01138 3' exoribonuclease family, domain 1 H2515_03030 PF00013 KH domain H2515_03030 PF03725 3' exoribonuclease family, domain 2 H2515_03035 PF05193 Peptidase M16 inactive domain H2515_03035 PF00675 Insulinase (Peptidase family M16) H2515_03040 PF00753 Metallo-beta-lactamase superfamily H2515_03040 PF16123 Hydroxyacylglutathione hydrolase C-terminus H2515_03045 PF01209 ubiE/COQ5 methyltransferase family H2515_03050 PF00075 RNase H H2515_03055 PF00929 Exonuclease H2515_03060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H2515_03070 PF00764 Arginosuccinate synthase H2515_03075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H2515_03075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H2515_03080 PF00202 Aminotransferase class-III H2515_03085 PF13840 ACT domain H2515_03085 PF01842 ACT domain H2515_03085 PF00696 Amino acid kinase family H2515_03105 PF14824 Sirohaem biosynthesis protein central H2515_03105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H2515_03105 PF10414 Sirohaem synthase dimerisation region H2515_03110 PF00009 Elongation factor Tu GTP binding domain H2515_03115 PF01507 Phosphoadenosine phosphosulfate reductase family H2515_03120 PF01507 Phosphoadenosine phosphosulfate reductase family H2515_03125 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H2515_03125 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H2515_03130 PF00175 Oxidoreductase NAD-binding domain H2515_03130 PF00667 FAD binding domain H2515_03130 PF00258 Flavodoxin H2515_03145 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_03185 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) H2515_03195 PF03595 Voltage-dependent anion channel H2515_03230 PF01979 Amidohydrolase family H2515_03235 PF00920 Dehydratase family H2515_03250 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) H2515_03260 PF00361 Proton-conducting membrane transporter H2515_03260 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H2515_03275 PF01116 Fructose-bisphosphate aldolase class-II H2515_03285 PF07728 AAA domain (dynein-related subfamily) H2515_03285 PF08406 CbbQ/NirQ/NorQ C-terminal H2515_03290 PF13614 AAA domain H2515_03300 PF00210 Ferritin-like domain H2515_03305 PF00936 BMC domain H2515_03310 PF00936 BMC domain H2515_03315 PF00936 BMC domain H2515_03325 PF03319 Ethanolamine utilisation protein EutN/carboxysome H2515_03340 PF00101 Ribulose bisphosphate carboxylase, small chain H2515_03345 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain H2515_03345 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain H2515_03350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2515_03350 PF03466 LysR substrate binding domain H2515_03360 PF00248 Aldo/keto reductase family H2515_03415 PF00364 Biotin-requiring enzyme H2515_03415 PF00561 alpha/beta hydrolase fold H2515_03455 PF13360 PQQ-like domain H2515_03455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H2515_03475 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H2515_03475 PF06481 COX Aromatic Rich Motif H2515_03480 PF00115 Cytochrome C and Quinol oxidase polypeptide I H2515_03485 PF00510 Cytochrome c oxidase subunit III H2515_03525 PF03069 Acetamidase/Formamidase family H2515_03530 PF01042 Endoribonuclease L-PSP H2515_03535 PF00005 ABC transporter H2515_03590 PF00268 Ribonucleotide reductase, small chain H2515_03595 PF03477 ATP cone domain H2515_03595 PF02867 Ribonucleotide reductase, barrel domain H2515_03595 PF00317 Ribonucleotide reductase, all-alpha domain H2515_03600 PF01523 Putative modulator of DNA gyrase H2515_03605 PF01434 Peptidase family M41 H2515_03605 PF00004 ATPase family associated with various cellular activities (AAA) H2515_03605 PF17862 AAA+ lid domain H2515_03605 PF06480 FtsH Extracellular H2515_03610 PF00809 Pterin binding enzyme H2515_03615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H2515_03615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H2515_03615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H2515_03615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H2515_03620 PF00121 Triosephosphate isomerase H2515_03625 PF03840 Preprotein translocase SecG subunit H2515_03635 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 H2515_03640 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit H2515_03645 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit H2515_03650 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit H2515_03660 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region H2515_03660 PF10531 SLBB domain H2515_03660 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H2515_03665 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal H2515_03665 PF00384 Molybdopterin oxidoreductase H2515_03665 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H2515_03670 PF00146 NADH dehydrogenase H2515_03675 PF12838 4Fe-4S dicluster domain H2515_03680 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 H2515_03685 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H2515_03690 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H2515_03690 PF00361 Proton-conducting membrane transporter H2515_03695 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus H2515_03695 PF00361 Proton-conducting membrane transporter H2515_03700 PF00361 Proton-conducting membrane transporter H2515_03715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H2515_03715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H2515_03715 PF03129 Anticodon binding domain H2515_03715 PF02824 TGS domain H2515_03720 PF05198 Translation initiation factor IF-3, N-terminal domain H2515_03720 PF00707 Translation initiation factor IF-3, C-terminal domain H2515_03725 PF01632 Ribosomal protein L35 H2515_03730 PF00453 Ribosomal protein L20 H2515_03735 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H2515_03735 PF01409 tRNA synthetases class II core domain (F) H2515_03740 PF03147 Ferredoxin-fold anticodon binding domain H2515_03740 PF03483 B3/4 domain H2515_03740 PF03484 tRNA synthetase B5 domain H2515_03740 PF01588 Putative tRNA binding domain H2515_03740 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H2515_03745 PF00216 Bacterial DNA-binding protein H2515_03795 PF00682 HMGL-like H2515_03795 PF08502 LeuA allosteric (dimerisation) domain H2515_03810 PF01510 N-acetylmuramoyl-L-alanine amidase H2515_03815 PF02677 Epoxyqueuosine reductase QueH H2515_03820 PF01329 Pterin 4 alpha carbinolamine dehydratase H2515_03840 PF18030 RimK PreATP-grasp domain H2515_03840 PF08443 RimK-like ATP-grasp domain H2515_03845 PF01553 Acyltransferase H2515_03855 PF02092 Glycyl-tRNA synthetase beta subunit H2515_03860 PF02091 Glycyl-tRNA synthetase alpha subunit H2515_03900 PF02698 DUF218 domain H2515_03905 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family H2515_03905 PF04055 Radical SAM superfamily H2515_03910 PF03099 Biotin/lipoate A/B protein ligase family H2515_03920 PF07943 Penicillin-binding protein 5, C-terminal domain H2515_03920 PF00768 D-alanyl-D-alanine carboxypeptidase H2515_03925 PF01098 Cell cycle protein H2515_03940 PF04085 rod shape-determining protein MreC H2515_03950 PF00149 Calcineurin-like phosphoesterase H2515_03950 PF02872 5'-nucleotidase, C-terminal domain H2515_03955 PF03625 Domain of unknown function DUF302 H2515_03975 PF00158 Sigma-54 interaction domain H2515_03975 PF00072 Response regulator receiver domain H2515_03975 PF02954 Bacterial regulatory protein, Fis family H2515_03980 PF00512 His Kinase A (phospho-acceptor) domain H2515_03980 PF00989 PAS fold H2515_03980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_03990 PF01967 MoaC family H2515_04000 PF01568 Molydopterin dinucleotide binding domain H2515_04000 PF00384 Molybdopterin oxidoreductase H2515_04000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H2515_04005 PF12800 4Fe-4S binding domain H2515_04005 PF13247 4Fe-4S dicluster domain H2515_04015 PF04055 Radical SAM superfamily H2515_04015 PF06463 Molybdenum Cofactor Synthesis C H2515_04020 PF00581 Rhodanese-like domain H2515_04025 PF01206 Sulfurtransferase TusA H2515_04030 PF13686 DsrE/DsrF/DrsH-like family H2515_04045 PF01593 Flavin containing amine oxidoreductase H2515_04060 PF02754 Cysteine-rich domain H2515_04065 PF01597 Glycine cleavage H-protein H2515_04075 PF01597 Glycine cleavage H-protein H2515_04085 PF03099 Biotin/lipoate A/B protein ligase family H2515_04130 PF08406 CbbQ/NirQ/NorQ C-terminal H2515_04130 PF07728 AAA domain (dynein-related subfamily) H2515_04140 PF00850 Histone deacetylase domain H2515_04155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2515_04155 PF03466 LysR substrate binding domain H2515_04170 PF09335 SNARE associated Golgi protein H2515_04175 PF07722 Peptidase C26 H2515_04180 PF00795 Carbon-nitrogen hydrolase H2515_04190 PF02421 Ferrous iron transport protein B H2515_04190 PF07670 Nucleoside recognition H2515_04190 PF07664 Ferrous iron transport protein B C terminus H2515_04190 PF17910 FeoB cytosolic helical domain H2515_04210 PF00877 NlpC/P60 family H2515_04230 PF04851 Type III restriction enzyme, res subunit H2515_04230 PF13307 Helicase C-terminal domain H2515_04235 PF00814 Glycoprotease family H2515_04245 PF00009 Elongation factor Tu GTP binding domain H2515_04245 PF03144 Elongation factor Tu domain 2 H2515_04245 PF16658 Class II release factor RF3, C-terminal domain H2515_04255 PF00199 Catalase H2515_04255 PF06628 Catalase-related immune-responsive H2515_04260 PF01078 Magnesium chelatase, subunit ChlI H2515_04260 PF13335 Magnesium chelatase, subunit ChlI C-terminal H2515_04265 PF04380 Membrane fusogenic activity H2515_04270 PF01494 FAD binding domain H2515_04275 PF01494 FAD binding domain H2515_04280 PF01026 TatD related DNase H2515_04285 PF00899 ThiF family H2515_04300 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase H2515_04310 PF01022 Bacterial regulatory protein, arsR family H2515_04320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2515_04325 PF00873 AcrB/AcrD/AcrF family H2515_04335 PF00581 Rhodanese-like domain H2515_04340 PF00462 Glutaredoxin H2515_04345 PF00085 Thioredoxin H2515_04350 PF01520 N-acetylmuramoyl-L-alanine amidase H2515_04350 PF11741 AMIN domain H2515_04355 PF03006 Haemolysin-III related H2515_04365 PF00701 Dihydrodipicolinate synthetase family H2515_04375 PF10397 Adenylosuccinate lyase C-terminus H2515_04375 PF00206 Lyase H2515_04380 PF01259 SAICAR synthetase H2515_04385 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H2515_04385 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H2515_04385 PF02769 AIR synthase related protein, C-terminal domain H2515_04395 PF08463 EcoEI R protein C-terminal H2515_04395 PF00271 Helicase conserved C-terminal domain H2515_04395 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) H2515_04395 PF04851 Type III restriction enzyme, res subunit H2515_04415 PF01850 PIN domain H2515_04420 PF00589 Phage integrase family H2515_04430 PF08241 Methyltransferase domain H2515_04440 PF00768 D-alanyl-D-alanine carboxypeptidase H2515_04440 PF07943 Penicillin-binding protein 5, C-terminal domain H2515_04445 PF07690 Major Facilitator Superfamily H2515_04450 PF00849 RNA pseudouridylate synthase H2515_04450 PF01479 S4 domain H2515_04460 PF06969 HemN C-terminal domain H2515_04460 PF04055 Radical SAM superfamily H2515_04475 PF01138 3' exoribonuclease family, domain 1 H2515_04475 PF03725 3' exoribonuclease family, domain 2 H2515_04480 PF01725 Ham1 family H2515_04485 PF04539 Sigma-70 region 3 H2515_04485 PF04542 Sigma-70 region 2 H2515_04485 PF00140 Sigma-70 factor, region 1.2 H2515_04485 PF04545 Sigma-70, region 4 H2515_04490 PF01165 Ribosomal protein S21 H2515_04500 PF00488 MutS domain V H2515_04500 PF01713 Smr domain H2515_04505 PF10410 DnaB-helicase binding domain of primase H2515_04505 PF08278 DNA primase DnaG DnaB-binding H2515_04505 PF08275 DNA primase catalytic core, N-terminal domain H2515_04505 PF01807 CHC2 zinc finger H2515_04510 PF03979 Sigma-70 factor, region 1.1 H2515_04510 PF00140 Sigma-70 factor, region 1.2 H2515_04510 PF04546 Sigma-70, non-essential region H2515_04510 PF04545 Sigma-70, region 4 H2515_04510 PF04542 Sigma-70 region 2 H2515_04510 PF04539 Sigma-70 region 3 H2515_04525 PF08240 Alcohol dehydrogenase GroES-like domain H2515_04525 PF00107 Zinc-binding dehydrogenase H2515_04530 PF02634 FdhD/NarQ family H2515_04540 PF00384 Molybdopterin oxidoreductase H2515_04555 PF00403 Heavy-metal-associated domain H2515_04555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H2515_04555 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_04560 PF09278 MerR, DNA binding H2515_04560 PF00376 MerR family regulatory protein H2515_04570 PF01747 ATP-sulfurylase H2515_04570 PF14306 PUA-like domain H2515_04575 PF00156 Phosphoribosyl transferase domain H2515_04590 PF00118 TCP-1/cpn60 chaperonin family H2515_04595 PF00166 Chaperonin 10 Kd subunit H2515_04605 PF11412 Disulphide bond corrector protein DsbC H2515_04605 PF02683 Cytochrome C biogenesis protein transmembrane region H2515_04615 PF01063 Amino-transferase class IV H2515_04620 PF03710 Glutamate-ammonia ligase adenylyltransferase H2515_04620 PF08335 GlnD PII-uridylyltransferase H2515_04630 PF00795 Carbon-nitrogen hydrolase H2515_04640 PF06472 ABC transporter transmembrane region 2 H2515_04640 PF00005 ABC transporter H2515_04650 PF00106 short chain dehydrogenase H2515_04660 PF01252 Signal peptidase (SPase) II H2515_04665 PF08264 Anticodon-binding domain of tRNA H2515_04665 PF06827 Zinc finger found in FPG and IleRS H2515_04665 PF00133 tRNA synthetases class I (I, L, M and V) H2515_04670 PF01687 Riboflavin kinase H2515_04670 PF06574 FAD synthetase H2515_04680 PF03023 Lipid II flippase MurJ H2515_04685 PF02321 Outer membrane efflux protein H2515_04690 PF04715 Anthranilate synthase component I, N terminal region H2515_04690 PF00425 chorismate binding enzyme H2515_04755 PF02899 Phage integrase, N-terminal SAM-like domain H2515_04755 PF00589 Phage integrase family H2515_04770 PF03472 Autoinducer binding domain H2515_04770 PF00196 Bacterial regulatory proteins, luxR family H2515_04800 PF02525 Flavodoxin-like fold H2515_04840 PF01965 DJ-1/PfpI family H2515_04850 PF02567 Phenazine biosynthesis-like protein H2515_04860 PF13302 Acetyltransferase (GNAT) domain H2515_04865 PF00891 O-methyltransferase domain H2515_04875 PF01047 MarR family H2515_04885 PF04264 YceI-like domain H2515_04910 PF00990 Diguanylate cyclase, GGDEF domain H2515_04910 PF00072 Response regulator receiver domain H2515_04915 PF02190 ATP-dependent protease La (LON) substrate-binding domain H2515_04915 PF05362 Lon protease (S16) C-terminal proteolytic domain H2515_04915 PF00004 ATPase family associated with various cellular activities (AAA) H2515_04935 PF05973 Phage derived protein Gp49-like (DUF891) H2515_04940 PF00589 Phage integrase family H2515_04940 PF02899 Phage integrase, N-terminal SAM-like domain H2515_04985 PF02560 Cyanate lyase C-terminal domain H2515_04995 PF01569 PAP2 superfamily H2515_05015 PF03073 TspO/MBR family H2515_05055 PF01695 IstB-like ATP binding protein H2515_05100 PF13191 AAA ATPase domain H2515_05100 PF00211 Adenylate and Guanylate cyclase catalytic domain H2515_05105 PF12852 Cupin H2515_05105 PF12833 Helix-turn-helix domain H2515_05120 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 H2515_05125 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H2515_05130 PF05638 Type VI secretion system effector, Hcp H2515_05135 PF07024 ImpE protein H2515_05140 PF04965 Gene 25-like lysozyme H2515_05145 PF05947 Type VI secretion system, TssF H2515_05155 PF10431 C-terminal, D2-small domain, of ClpB protein H2515_05155 PF07724 AAA domain (Cdc48 subfamily) H2515_05155 PF00004 ATPase family associated with various cellular activities (AAA) H2515_05155 PF17871 AAA lid domain H2515_05180 PF04717 Type VI secretion system, phage-baseplate injector H2515_05180 PF06715 Gp5 C-terminal repeat (3 copies) H2515_05195 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H2515_05205 PF14331 ImcF-related N-terminal domain H2515_05205 PF06744 Type VI secretion protein IcmF C-terminal H2515_05205 PF06761 Intracellular multiplication and human macrophage-killing H2515_05220 PF03793 PASTA domain H2515_05220 PF00069 Protein kinase domain H2515_05235 PF05860 haemagglutination activity domain H2515_05250 PF06812 ImpA, N-terminal, type VI secretion system H2515_05260 PF00872 Transposase, Mutator family H2515_05280 PF00717 Peptidase S24-like H2515_05300 PF01850 PIN domain H2515_05325 PF00216 Bacterial DNA-binding protein H2515_05340 PF00005 ABC transporter H2515_05345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2515_05350 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain H2515_05350 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain H2515_05355 PF00101 Ribulose bisphosphate carboxylase, small chain H2515_05360 PF07728 AAA domain (dynein-related subfamily) H2515_05360 PF08406 CbbQ/NirQ/NorQ C-terminal H2515_05380 PF08340 Domain of unknown function (DUF1732) H2515_05380 PF03755 YicC-like family, N-terminal region H2515_05385 PF00625 Guanylate kinase H2515_05390 PF01192 RNA polymerase Rpb6 H2515_05395 PF04607 Region found in RelA / SpoT proteins H2515_05395 PF02824 TGS domain H2515_05395 PF13291 ACT domain H2515_05400 PF01042 Endoribonuclease L-PSP H2515_05410 PF00270 DEAD/DEAH box helicase H2515_05410 PF13749 Putative ATP-dependent DNA helicase recG C-terminal H2515_05410 PF17191 RecG wedge domain H2515_05420 PF01593 Flavin containing amine oxidoreductase H2515_05425 PF01594 AI-2E family transporter H2515_05445 PF02040 Arsenical pump membrane protein H2515_05450 PF01875 Memo-like protein H2515_05455 PF01871 AMMECR1 H2515_05460 PF04055 Radical SAM superfamily H2515_05465 PF00753 Metallo-beta-lactamase superfamily H2515_05470 PF13091 PLD-like domain H2515_05475 PF00994 Probable molybdopterin binding domain H2515_05475 PF03453 MoeA N-terminal region (domain I and II) H2515_05475 PF03454 MoeA C-terminal region (domain IV) H2515_05480 PF03205 Molybdopterin guanine dinucleotide synthesis protein B H2515_05485 PF12804 MobA-like NTP transferase domain H2515_05495 PF00180 Isocitrate/isopropylmalate dehydrogenase H2515_05500 PF02774 Semialdehyde dehydrogenase, dimerisation domain H2515_05500 PF01118 Semialdehyde dehydrogenase, NAD binding domain H2515_05510 PF01416 tRNA pseudouridine synthase H2515_05515 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H2515_05520 PF00291 Pyridoxal-phosphate dependent enzyme H2515_05525 PF00290 Tryptophan synthase alpha chain H2515_05530 PF01039 Carboxyl transferase domain H2515_05530 PF17848 Acetyl-coA carboxylase zinc finger domain H2515_05535 PF02875 Mur ligase family, glutamate ligase domain H2515_05535 PF08245 Mur ligase middle domain H2515_05545 PF13537 Glutamine amidotransferase domain H2515_05545 PF00156 Phosphoribosyl transferase domain H2515_05550 PF01053 Cys/Met metabolism PLP-dependent enzyme H2515_05560 PF01595 Cyclin M transmembrane N-terminal domain H2515_05560 PF00571 CBS domain H2515_05560 PF03471 Transporter associated domain H2515_05565 PF02547 Queuosine biosynthesis protein H2515_05570 PF01702 Queuine tRNA-ribosyltransferase H2515_05575 PF02699 Preprotein translocase subunit H2515_05580 PF13721 SecD export protein N-terminal TM region H2515_05580 PF07549 SecD/SecF GG Motif H2515_05580 PF02355 Protein export membrane protein H2515_05585 PF02355 Protein export membrane protein H2515_05585 PF07549 SecD/SecF GG Motif H2515_05605 PF01555 DNA methylase H2515_05630 PF01266 FAD dependent oxidoreductase H2515_05635 PF00291 Pyridoxal-phosphate dependent enzyme H2515_05635 PF00585 C-terminal regulatory domain of Threonine dehydratase H2515_05660 PF01553 Acyltransferase H2515_05665 PF01208 Uroporphyrinogen decarboxylase (URO-D) H2515_05670 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_05670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H2515_05675 PF01645 Conserved region in glutamate synthase H2515_05675 PF01493 GXGXG motif H2515_05675 PF04898 Glutamate synthase central domain H2515_05675 PF00310 Glutamine amidotransferases class-II H2515_05680 PF01966 HD domain H2515_05680 PF13286 Phosphohydrolase-associated domain H2515_05685 PF02511 Thymidylate synthase complementing protein H2515_05690 PF01761 3-dehydroquinate synthase H2515_05695 PF01202 Shikimate kinase H2515_05700 PF07660 Secretin and TonB N terminus short domain H2515_05700 PF11741 AMIN domain H2515_05700 PF00263 Bacterial type II and III secretion system protein H2515_05700 PF03958 Bacterial type II/III secretion system short domain H2515_05720 PF11104 Type IV pilus assembly protein PilM; H2515_05725 PF14437 MafB19-like deaminase H2515_05730 PF01894 Uncharacterised protein family UPF0047 H2515_05740 PF01713 Smr domain H2515_05740 PF00488 MutS domain V H2515_05745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H2515_05745 PF00205 Thiamine pyrophosphate enzyme, central domain H2515_05745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H2515_05750 PF10369 Small subunit of acetolactate synthase H2515_05755 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H2515_05755 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H2515_05760 PF02666 Phosphatidylserine decarboxylase H2515_05765 PF01066 CDP-alcohol phosphatidyltransferase H2515_05775 PF00873 AcrB/AcrD/AcrF family H2515_05810 PF00873 AcrB/AcrD/AcrF family H2515_05825 PF00512 His Kinase A (phospho-acceptor) domain H2515_05825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_05825 PF00672 HAMP domain H2515_05830 PF00072 Response regulator receiver domain H2515_05830 PF00486 Transcriptional regulatory protein, C terminal H2515_05855 PF00072 Response regulator receiver domain H2515_05855 PF00486 Transcriptional regulatory protein, C terminal H2515_05860 PF08521 Two-component sensor kinase N-terminal H2515_05860 PF00512 His Kinase A (phospho-acceptor) domain H2515_05860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_05875 PF00873 AcrB/AcrD/AcrF family H2515_05885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_05885 PF00986 DNA gyrase B subunit, carboxyl terminus H2515_05885 PF00204 DNA gyrase B H2515_05885 PF01751 Toprim domain H2515_05890 PF00521 DNA gyrase/topoisomerase IV, subunit A H2515_05900 PF01464 Transglycosylase SLT domain H2515_05905 PF02678 Pirin H2515_05905 PF17954 Quercetinase C-terminal cupin domain H2515_05920 PF00384 Molybdopterin oxidoreductase H2515_05935 PF11799 impB/mucB/samB family C-terminal domain H2515_05935 PF00817 impB/mucB/samB family H2515_05965 PF08376 Nitrate and nitrite sensing H2515_05965 PF03861 ANTAR domain H2515_05975 PF10414 Sirohaem synthase dimerisation region H2515_05975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H2515_05980 PF02885 Glycosyl transferase family, helical bundle domain H2515_05985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H2515_05985 PF00384 Molybdopterin oxidoreductase H2515_05985 PF01568 Molydopterin dinucleotide binding domain H2515_05990 PF00355 Rieske [2Fe-2S] domain H2515_05995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H2515_05995 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_05995 PF04324 BFD-like [2Fe-2S] binding domain H2515_05995 PF18267 Rubredoxin NAD+ reductase C-terminal domain H2515_05995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H2515_06005 PF07690 Major Facilitator Superfamily H2515_06010 PF00005 ABC transporter H2515_06015 PF00027 Cyclic nucleotide-binding domain H2515_06015 PF13545 Crp-like helix-turn-helix domain H2515_06020 PF04343 Protein of unknown function, DUF488 H2515_06025 PF01597 Glycine cleavage H-protein H2515_06040 PF00175 Oxidoreductase NAD-binding domain H2515_06040 PF00111 2Fe-2S iron-sulfur cluster binding domain H2515_06040 PF00970 Oxidoreductase FAD-binding domain H2515_06045 PF00970 Oxidoreductase FAD-binding domain H2515_06045 PF00042 Globin H2515_06045 PF00175 Oxidoreductase NAD-binding domain H2515_06050 PF00529 HlyD membrane-fusion protein of T1SS H2515_06050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2515_06055 PF02321 Outer membrane efflux protein H2515_06060 PF07690 Major Facilitator Superfamily H2515_06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2515_06065 PF03466 LysR substrate binding domain H2515_06100 PF05188 MutS domain II H2515_06100 PF01624 MutS domain I H2515_06100 PF05192 MutS domain III H2515_06100 PF05190 MutS family domain IV H2515_06100 PF00488 MutS domain V H2515_06105 PF01027 Inhibitor of apoptosis-promoting Bax1 H2515_06120 PF01713 Smr domain H2515_06120 PF00488 MutS domain V H2515_06130 PF01565 FAD binding domain H2515_06130 PF02913 FAD linked oxidases, C-terminal domain H2515_06135 PF02569 Pantoate-beta-alanine ligase H2515_06140 PF02548 Ketopantoate hydroxymethyltransferase H2515_06145 PF01712 Deoxynucleoside kinase H2515_06150 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H2515_06155 PF00571 CBS domain H2515_06155 PF02272 DHHA1 domain H2515_06155 PF01743 Poly A polymerase head domain H2515_06155 PF12627 Probable RNA and SrmB- binding site of polymerase A H2515_06155 PF01368 DHH family H2515_06160 PF01743 Poly A polymerase head domain H2515_06160 PF12626 Polymerase A arginine-rich C-terminus H2515_06160 PF12627 Probable RNA and SrmB- binding site of polymerase A H2515_06165 PF00535 Glycosyl transferase family 2 H2515_06170 PF00571 CBS domain H2515_06170 PF00478 IMP dehydrogenase / GMP reductase domain H2515_06175 PF02540 NAD synthase H2515_06175 PF00958 GMP synthase C terminal domain H2515_06175 PF00117 Glutamine amidotransferase class-I H2515_06180 PF00696 Amino acid kinase family H2515_06180 PF01472 PUA domain H2515_06185 PF00924 Mechanosensitive ion channel H2515_06185 PF12794 Mechanosensitive ion channel inner membrane domain 1 H2515_06185 PF12795 Mechanosensitive ion channel porin domain H2515_06205 PF01300 Telomere recombination H2515_06210 PF02163 Peptidase family M50 H2515_06215 PF00579 tRNA synthetases class I (W and Y) H2515_06220 PF02616 Segregation and condensation protein ScpA H2515_06225 PF04079 Segregation and condensation complex subunit ScpB H2515_06230 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_06235 PF01479 S4 domain H2515_06235 PF00849 RNA pseudouridylate synthase H2515_06255 PF01370 NAD dependent epimerase/dehydratase family H2515_06260 PF16363 GDP-mannose 4,6 dehydratase H2515_06265 PF03552 Cellulose synthase H2515_06265 PF07238 PilZ domain H2515_06265 PF00535 Glycosyl transferase family 2 H2515_06270 PF01270 Glycosyl hydrolases family 8 H2515_06275 PF00155 Aminotransferase class I and II H2515_06285 PF11897 Protein of unknown function (DUF3417) H2515_06285 PF00343 Carbohydrate phosphorylase H2515_06290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H2515_06290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H2515_06305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H2515_06305 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_06315 PF00294 pfkB family carbohydrate kinase H2515_06320 PF01515 Phosphate acetyl/butaryl transferase H2515_06325 PF00083 Sugar (and other) transporter H2515_06330 PF00871 Acetokinase family H2515_06335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H2515_06335 PF00364 Biotin-requiring enzyme H2515_06335 PF02817 e3 binding domain H2515_06340 PF06415 BPG-independent PGAM N-terminus (iPGM_N) H2515_06340 PF01676 Metalloenzyme superfamily H2515_06345 PF00391 PEP-utilising enzyme, mobile domain H2515_06345 PF02896 PEP-utilising enzyme, TIM barrel domain H2515_06345 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H2515_06355 PF03330 Lytic transglycolase H2515_06355 PF05036 Sporulation related domain H2515_06360 PF01546 Peptidase family M20/M25/M40 H2515_06360 PF07687 Peptidase dimerisation domain H2515_06365 PF14602 Hexapeptide repeat of succinyl-transferase H2515_06365 PF00132 Bacterial transferase hexapeptide (six repeats) H2515_06365 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal H2515_06370 PF00155 Aminotransferase class I and II H2515_06380 PF01618 MotA/TolQ/ExbB proton channel family H2515_06385 PF02472 Biopolymer transport protein ExbD/TolR H2515_06395 PF00171 Aldehyde dehydrogenase family H2515_06395 PF14850 DNA-binding domain of Proline dehydrogenase H2515_06395 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H2515_06395 PF01619 Proline dehydrogenase H2515_06405 PF10369 Small subunit of acetolactate synthase H2515_06410 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H2515_06410 PF00056 lactate/malate dehydrogenase, NAD binding domain H2515_06420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H2515_06425 PF00528 Binding-protein-dependent transport system inner membrane component H2515_06430 PF12911 N-terminal TM domain of oligopeptide transport permease C H2515_06430 PF00528 Binding-protein-dependent transport system inner membrane component H2515_06435 PF00005 ABC transporter H2515_06435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H2515_06440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H2515_06440 PF00005 ABC transporter H2515_06460 PF13673 Acetyltransferase (GNAT) domain H2515_06470 PF00664 ABC transporter transmembrane region H2515_06470 PF00005 ABC transporter H2515_06480 PF13419 Haloacid dehalogenase-like hydrolase H2515_06490 PF01979 Amidohydrolase family H2515_06500 PF00877 NlpC/P60 family H2515_06510 PF04241 Protein of unknown function (DUF423) H2515_06525 PF00034 Cytochrome c H2515_06535 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H2515_06540 PF00115 Cytochrome C and Quinol oxidase polypeptide I H2515_06555 PF00127 Copper binding proteins, plastocyanin/azurin family H2515_06565 PF01040 UbiA prenyltransferase family H2515_06570 PF07690 Major Facilitator Superfamily H2515_06585 PF00072 Response regulator receiver domain H2515_06590 PF00512 His Kinase A (phospho-acceptor) domain H2515_06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_06610 PF05140 ResB-like family H2515_06645 PF04356 Protein of unknown function (DUF489) H2515_06650 PF01966 HD domain H2515_06650 PF01909 Nucleotidyltransferase domain H2515_06650 PF01842 ACT domain H2515_06650 PF08335 GlnD PII-uridylyltransferase H2515_06655 PF00557 Metallopeptidase family M24 H2515_06660 PF03749 Sugar fermentation stimulation protein RE domain H2515_06660 PF17746 SfsA N-terminal OB domain H2515_06665 PF00749 tRNA synthetases class I (E and Q), catalytic domain H2515_06670 PF00586 AIR synthase related protein, N-terminal domain H2515_06670 PF02769 AIR synthase related protein, C-terminal domain H2515_06675 PF04608 Phosphatidylglycerophosphatase A H2515_06680 PF18146 Damage-inducible protein CinA KH domain H2515_06680 PF00994 Probable molybdopterin binding domain H2515_06680 PF02464 Competence-damaged protein H2515_06685 PF00154 recA bacterial DNA recombination protein H2515_06690 PF02631 RecX family H2515_06695 PF01411 tRNA synthetases class II (A) H2515_06695 PF02272 DHHA1 domain H2515_06695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H2515_06715 PF00271 Helicase conserved C-terminal domain H2515_06715 PF12419 SNF2 Helicase protein H2515_06715 PF00176 SNF2 family N-terminal domain H2515_06720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H2515_06720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H2515_06720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H2515_06720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H2515_06730 PF00005 ABC transporter H2515_06730 PF12848 ABC transporter H2515_06750 PF01555 DNA methylase H2515_06770 PF13667 ThiC-associated domain H2515_06770 PF01964 Radical SAM ThiC family H2515_06775 PF02954 Bacterial regulatory protein, Fis family H2515_06775 PF00072 Response regulator receiver domain H2515_06775 PF00158 Sigma-54 interaction domain H2515_06780 PF02230 Phospholipase/Carboxylesterase H2515_06790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H2515_06790 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_06795 PF04349 Periplasmic glucan biosynthesis protein, MdoG H2515_06805 PF00535 Glycosyl transferase family 2 H2515_06820 PF04241 Protein of unknown function (DUF423) H2515_06830 PF01343 Peptidase family S49 H2515_06830 PF08496 Peptidase family S49 N-terminal H2515_06835 PF02597 ThiS family H2515_06840 PF02391 MoaE protein H2515_06845 PF04461 Protein of unknown function (DUF520) H2515_06850 PF08669 Glycine cleavage T-protein C-terminal barrel domain H2515_06850 PF01571 Aminomethyltransferase folate-binding domain H2515_06855 PF01597 Glycine cleavage H-protein H2515_06860 PF02347 Glycine cleavage system P-protein H2515_06865 PF02347 Glycine cleavage system P-protein H2515_06870 PF07726 ATPase family associated with various cellular activities (AAA) H2515_06870 PF17863 AAA lid domain H2515_06880 PF01841 Transglutaminase-like superfamily H2515_06880 PF11992 Domain of unknown function (DUF3488) H2515_06880 PF13559 Domain of unknown function (DUF4129) H2515_06885 PF00005 ABC transporter H2515_06885 PF00664 ABC transporter transmembrane region H2515_06890 PF11953 Domain of unknown function (DUF3470) H2515_06890 PF00037 4Fe-4S binding domain H2515_06895 PF00578 AhpC/TSA family H2515_06895 PF10417 C-terminal domain of 1-Cys peroxiredoxin H2515_06905 PF02811 PHP domain H2515_06910 PF01594 AI-2E family transporter H2515_06925 PF00588 SpoU rRNA Methylase family H2515_06925 PF08032 RNA 2'-O ribose methyltransferase substrate binding H2515_06930 PF01026 TatD related DNase H2515_06935 PF12706 Beta-lactamase superfamily domain H2515_06935 PF03099 Biotin/lipoate A/B protein ligase family H2515_06955 PF01571 Aminomethyltransferase folate-binding domain H2515_06965 PF00890 FAD binding domain H2515_06965 PF02910 Fumarate reductase flavoprotein C-term H2515_06970 PF08281 Sigma-70, region 4 H2515_06970 PF04542 Sigma-70 region 2 H2515_06980 PF13180 PDZ domain H2515_06985 PF00679 Elongation factor G C-terminus H2515_06985 PF06421 GTP-binding protein LepA C-terminus H2515_06985 PF03144 Elongation factor Tu domain 2 H2515_06985 PF00009 Elongation factor Tu GTP binding domain H2515_06990 PF10502 Signal peptidase, peptidase S26 H2515_07000 PF00035 Double-stranded RNA binding motif H2515_07000 PF14622 Ribonuclease-III-like H2515_07005 PF01926 50S ribosome-binding GTPase H2515_07005 PF07650 KH domain H2515_07010 PF02565 Recombination protein O C terminal H2515_07010 PF11967 Recombination protein O N terminal H2515_07015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H2515_07020 PF01648 4'-phosphopantetheinyl transferase superfamily H2515_07025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H2515_07025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H2515_07025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H2515_07030 PF00294 pfkB family carbohydrate kinase H2515_07030 PF01467 Cytidylyltransferase-like H2515_07035 PF01171 PP-loop family H2515_07040 PF01430 Hsp33 protein H2515_07085 PF01103 Surface antigen H2515_07085 PF17243 POTRA domain TamA domain 1 H2515_07085 PF07244 Surface antigen variable number repeat H2515_07090 PF04357 TamB, inner membrane protein subunit of TAM complex H2515_07095 PF01266 FAD dependent oxidoreductase H2515_07120 PF17871 AAA lid domain H2515_07120 PF00004 ATPase family associated with various cellular activities (AAA) H2515_07120 PF02861 Clp amino terminal domain, pathogenicity island component H2515_07120 PF07724 AAA domain (Cdc48 subfamily) H2515_07120 PF10431 C-terminal, D2-small domain, of ClpB protein H2515_07130 PF01850 PIN domain H2515_07140 PF00665 Integrase core domain H2515_07155 PF18019 HD domain H2515_07175 PF09615 CRISPR-associated protein (Cas_Csy3) H2515_07185 PF01867 CRISPR associated protein Cas1 H2515_07190 PF03707 Bacterial signalling protein N terminal repeat H2515_07190 PF00990 Diguanylate cyclase, GGDEF domain H2515_07190 PF00563 EAL domain H2515_07220 PF01370 NAD dependent epimerase/dehydratase family H2515_07225 PF01370 NAD dependent epimerase/dehydratase family H2515_07230 PF02080 TrkA-C domain H2515_07230 PF02254 TrkA-N domain H2515_07230 PF00999 Sodium/hydrogen exchanger family H2515_07235 PF00501 AMP-binding enzyme H2515_07235 PF13193 AMP-binding enzyme C-terminal domain H2515_07235 PF16177 Acetyl-coenzyme A synthetase N-terminus H2515_07240 PF00534 Glycosyl transferases group 1 H2515_07240 PF13439 Glycosyltransferase Family 4 H2515_07245 PF00004 ATPase family associated with various cellular activities (AAA) H2515_07245 PF17871 AAA lid domain H2515_07245 PF10431 C-terminal, D2-small domain, of ClpB protein H2515_07245 PF02861 Clp amino terminal domain, pathogenicity island component H2515_07245 PF07724 AAA domain (Cdc48 subfamily) H2515_07255 PF01264 Chorismate synthase H2515_07260 PF02649 Type I GTP cyclohydrolase folE2 H2515_07265 PF02780 Transketolase, C-terminal domain H2515_07265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H2515_07265 PF02779 Transketolase, pyrimidine binding domain H2515_07270 PF00348 Polyprenyl synthetase H2515_07275 PF02609 Exonuclease VII small subunit H2515_07280 PF07690 Major Facilitator Superfamily H2515_07290 PF00085 Thioredoxin H2515_07295 PF13742 OB-fold nucleic acid binding domain H2515_07295 PF02601 Exonuclease VII, large subunit H2515_07305 PF13520 Amino acid permease H2515_07310 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H2515_07315 PF00149 Calcineurin-like phosphoesterase H2515_07320 PF00689 Cation transporting ATPase, C-terminus H2515_07320 PF00690 Cation transporter/ATPase, N-terminus H2515_07340 PF00682 HMGL-like H2515_07340 PF08502 LeuA allosteric (dimerisation) domain H2515_07345 PF01037 Lrp/AsnC ligand binding domain H2515_07350 PF01047 MarR family H2515_07355 PF02627 Carboxymuconolactone decarboxylase family H2515_07360 PF01047 MarR family H2515_07375 PF01047 MarR family H2515_07390 PF00106 short chain dehydrogenase H2515_07395 PF00109 Beta-ketoacyl synthase, N-terminal domain H2515_07395 PF02801 Beta-ketoacyl synthase, C-terminal domain H2515_07400 PF02801 Beta-ketoacyl synthase, C-terminal domain H2515_07400 PF00109 Beta-ketoacyl synthase, N-terminal domain H2515_07430 PF00106 short chain dehydrogenase H2515_07445 PF00589 Phage integrase family H2515_07460 PF04264 YceI-like domain H2515_07475 PF01850 PIN domain H2515_07485 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H2515_07485 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H2515_07490 PF12833 Helix-turn-helix domain H2515_07490 PF00730 HhH-GPD superfamily base excision DNA repair protein H2515_07490 PF06029 AlkA N-terminal domain H2515_07490 PF02805 Metal binding domain of Ada H2515_07500 PF08808 RES domain H2515_07505 PF00862 Sucrose synthase H2515_07505 PF00534 Glycosyl transferases group 1 H2515_07510 PF00862 Sucrose synthase H2515_07510 PF00534 Glycosyl transferases group 1 H2515_07515 PF00294 pfkB family carbohydrate kinase H2515_07535 PF00171 Aldehyde dehydrogenase family H2515_07540 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H2515_07540 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H2515_07560 PF00111 2Fe-2S iron-sulfur cluster binding domain H2515_07565 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H2515_07575 PF06988 NifT/FixU protein H2515_07580 PF00266 Aminotransferase class-V H2515_07590 PF04319 NifZ domain H2515_07595 PF05484 LRV protein FeS4 cluster H2515_07595 PF01816 Leucine rich repeat variant H2515_07610 PF01521 Iron-sulphur cluster biosynthesis H2515_07615 PF00037 4Fe-4S binding domain H2515_07620 PF02579 Dinitrogenase iron-molybdenum cofactor H2515_07620 PF04055 Radical SAM superfamily H2515_07625 PF02954 Bacterial regulatory protein, Fis family H2515_07625 PF00158 Sigma-54 interaction domain H2515_07625 PF01590 GAF domain H2515_07630 PF03747 ADP-ribosylglycohydrolase H2515_07635 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) H2515_07645 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family H2515_07650 PF00148 Nitrogenase component 1 type Oxidoreductase H2515_07655 PF00148 Nitrogenase component 1 type Oxidoreductase H2515_07655 PF11844 Domain of unknown function (DUF3364) H2515_07660 PF00111 2Fe-2S iron-sulfur cluster binding domain H2515_07670 PF00148 Nitrogenase component 1 type Oxidoreductase H2515_07670 PF04324 BFD-like [2Fe-2S] binding domain H2515_07675 PF00148 Nitrogenase component 1 type Oxidoreductase H2515_07680 PF02579 Dinitrogenase iron-molybdenum cofactor H2515_07685 PF03270 Protein of unknown function, DUF269 H2515_07690 PF05082 Rop-like H2515_07695 PF12838 4Fe-4S dicluster domain H2515_07700 PF04891 NifQ H2515_07710 PF01521 Iron-sulphur cluster biosynthesis H2515_07715 PF04324 BFD-like [2Fe-2S] binding domain H2515_07715 PF01106 NifU-like domain H2515_07715 PF01592 NifU-like N terminal domain H2515_07720 PF00266 Aminotransferase class-V H2515_07725 PF00682 HMGL-like H2515_07730 PF00132 Bacterial transferase hexapeptide (six repeats) H2515_07735 PF03206 Nitrogen fixation protein NifW H2515_07745 PF00581 Rhodanese-like domain H2515_07760 PF00355 Rieske [2Fe-2S] domain H2515_07780 PF01593 Flavin containing amine oxidoreductase H2515_07785 PF01012 Electron transfer flavoprotein domain H2515_07790 PF01012 Electron transfer flavoprotein domain H2515_07790 PF00766 Electron transfer flavoprotein FAD-binding domain H2515_07795 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_07815 PF01557 Fumarylacetoacetate (FAA) hydrolase family H2515_07825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H2515_07825 PF17944 Arginine decarboxylase C-terminal helical extension H2515_07825 PF17810 Arginine decarboxylase helical bundle domain H2515_07830 PF02562 PhoH-like protein H2515_07830 PF13638 PIN domain H2515_07835 PF00578 AhpC/TSA family H2515_07855 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain H2515_07855 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H2515_07860 PF00533 BRCA1 C Terminus (BRCT) domain H2515_07860 PF01653 NAD-dependent DNA ligase adenylation domain H2515_07860 PF12826 Helix-hairpin-helix motif H2515_07860 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H2515_07860 PF03120 NAD-dependent DNA ligase OB-fold domain H2515_07870 PF06470 SMC proteins Flexible Hinge Domain H2515_07870 PF02463 RecF/RecN/SMC N terminal domain H2515_07875 PF14489 QueF-like protein H2515_07895 PF03707 Bacterial signalling protein N terminal repeat H2515_07895 PF00990 Diguanylate cyclase, GGDEF domain H2515_07895 PF00563 EAL domain H2515_07910 PF03170 Bacterial cellulose synthase subunit H2515_07915 PF00535 Glycosyl transferase family 2 H2515_07915 PF07238 PilZ domain H2515_07920 PF00072 Response regulator receiver domain H2515_07925 PF01627 Hpt domain H2515_07925 PF00512 His Kinase A (phospho-acceptor) domain H2515_07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_07925 PF00072 Response regulator receiver domain H2515_07930 PF00378 Enoyl-CoA hydratase/isomerase H2515_07935 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) H2515_07940 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) H2515_07945 PF01270 Glycosyl hydrolases family 8 H2515_07950 PF03552 Cellulose synthase H2515_07950 PF07238 PilZ domain H2515_07950 PF03170 Bacterial cellulose synthase subunit H2515_07950 PF00535 Glycosyl transferase family 2 H2515_07965 PF00563 EAL domain H2515_07965 PF00990 Diguanylate cyclase, GGDEF domain H2515_07965 PF03707 Bacterial signalling protein N terminal repeat H2515_07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_07990 PF00183 Hsp90 protein H2515_08000 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system H2515_08030 PF07963 Prokaryotic N-terminal methylation motif H2515_08030 PF00114 Pilin (bacterial filament) H2515_08045 PF00482 Type II secretion system (T2SS), protein F H2515_08100 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system H2515_08140 PF01451 Low molecular weight phosphotyrosine protein phosphatase H2515_08145 PF06953 Arsenical resistance operon trans-acting repressor ArsD H2515_08150 PF02374 Anion-transporting ATPase H2515_08155 PF00230 Major intrinsic protein H2515_08180 PF00528 Binding-protein-dependent transport system inner membrane component H2515_08185 PF00528 Binding-protein-dependent transport system inner membrane component H2515_08190 PF12849 PBP superfamily domain H2515_08210 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H2515_08210 PF01926 50S ribosome-binding GTPase H2515_08225 PF13393 Histidyl-tRNA synthetase H2515_08225 PF03129 Anticodon binding domain H2515_08230 PF04551 GcpE protein H2515_08235 PF13464 Domain of unknown function (DUF4115) H2515_08245 PF04055 Radical SAM superfamily H2515_08250 PF00334 Nucleoside diphosphate kinase H2515_08260 PF01119 DNA mismatch repair protein, C-terminal domain H2515_08260 PF08676 MutL C terminal dimerisation domain H2515_08265 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H2515_08275 PF00202 Aminotransferase class-III H2515_08280 PF01256 Carbohydrate kinase H2515_08280 PF03853 YjeF-related protein N-terminus H2515_08285 PF00909 Ammonium Transporter Family H2515_08290 PF02132 RecR protein H2515_08290 PF13662 Toprim domain H2515_08295 PF02575 YbaB/EbfC DNA-binding family H2515_08300 PF12170 DNA polymerase III tau subunit V interacting with alpha H2515_08300 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H2515_08300 PF12169 DNA polymerase III subunits gamma and tau domain III H2515_08320 PF09115 DNA polymerase III, delta subunit, C terminal H2515_08325 PF02223 Thymidylate kinase H2515_08330 PF02618 YceG-like family H2515_08340 PF00109 Beta-ketoacyl synthase, N-terminal domain H2515_08340 PF02801 Beta-ketoacyl synthase, C-terminal domain H2515_08345 PF00550 Phosphopantetheine attachment site H2515_08355 PF00698 Acyl transferase domain H2515_08360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H2515_08360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H2515_08365 PF02504 Fatty acid synthesis protein H2515_08370 PF01783 Ribosomal L32p protein family H2515_08380 PF03631 Virulence factor BrkB H2515_08385 PF00308 Bacterial dnaA protein H2515_08390 PF01066 CDP-alcohol phosphatidyltransferase H2515_08395 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H2515_08395 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H2515_08400 PF02769 AIR synthase related protein, C-terminal domain H2515_08400 PF00586 AIR synthase related protein, N-terminal domain H2515_08405 PF00551 Formyl transferase H2515_08410 PF00994 Probable molybdopterin binding domain H2515_08410 PF02464 Competence-damaged protein H2515_08410 PF18146 Damage-inducible protein CinA KH domain H2515_08415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H2515_08415 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_08420 PF03976 Polyphosphate kinase 2 (PPK2) H2515_08425 PF08461 Ribonuclease R winged-helix domain H2515_08425 PF00773 RNB domain H2515_08425 PF08206 Ribonuclease B OB domain H2515_08425 PF17876 Cold shock domain H2515_08445 PF00709 Adenylosuccinate synthetase H2515_08450 PF13393 Histidyl-tRNA synthetase H2515_08455 PF01145 SPFH domain / Band 7 family H2515_08460 PF01145 SPFH domain / Band 7 family H2515_08465 PF01926 50S ribosome-binding GTPase H2515_08465 PF13167 GTP-binding GTPase N-terminal H2515_08465 PF16360 GTP-binding GTPase Middle Region H2515_08470 PF17209 Hfq protein H2515_08475 PF00311 Phosphoenolpyruvate carboxylase H2515_08480 PF02545 Maf-like protein H2515_08495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2515_08500 PF00873 AcrB/AcrD/AcrF family H2515_08505 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H2515_08505 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H2515_08510 PF02503 Polyphosphate kinase middle domain H2515_08510 PF13089 Polyphosphate kinase N-terminal domain H2515_08510 PF17941 Polyphosphate kinase C-terminal domain 1 H2515_08510 PF13090 Polyphosphate kinase C-terminal domain 2 H2515_08520 PF01928 CYTH domain H2515_08530 PF11940 Domain of unknown function (DUF3458) Ig-like fold H2515_08530 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H2515_08530 PF01433 Peptidase family M1 domain H2515_08540 PF00717 Peptidase S24-like H2515_08540 PF01726 LexA DNA binding domain H2515_08550 PF13145 PPIC-type PPIASE domain H2515_08565 PF00216 Bacterial DNA-binding protein H2515_08570 PF00004 ATPase family associated with various cellular activities (AAA) H2515_08570 PF05362 Lon protease (S16) C-terminal proteolytic domain H2515_08570 PF02190 ATP-dependent protease La (LON) substrate-binding domain H2515_08575 PF10431 C-terminal, D2-small domain, of ClpB protein H2515_08575 PF06689 ClpX C4-type zinc finger H2515_08575 PF07724 AAA domain (Cdc48 subfamily) H2515_08580 PF00574 Clp protease H2515_08585 PF05698 Bacterial trigger factor protein (TF) C-terminus H2515_08585 PF05697 Bacterial trigger factor protein (TF) H2515_08585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H2515_08590 PF00156 Phosphoribosyl transferase domain H2515_08595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H2515_08600 PF18073 Rubredoxin metal binding domain H2515_08605 PF00216 Bacterial DNA-binding protein H2515_08610 PF00575 S1 RNA binding domain H2515_08615 PF02224 Cytidylate kinase H2515_08620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H2515_08630 PF00793 DAHP synthetase I family H2515_08630 PF18152 DAHP synthase ferredoxin-like domain H2515_08635 PF00155 Aminotransferase class I and II H2515_08640 PF01842 ACT domain H2515_08640 PF00800 Prephenate dehydratase H2515_08640 PF01817 Chorismate mutase type II H2515_08645 PF00266 Aminotransferase class-V H2515_08650 PF03989 DNA gyrase C-terminal domain, beta-propeller H2515_08650 PF00521 DNA gyrase/topoisomerase IV, subunit A H2515_08655 PF01008 Initiation factor 2 subunit family H2515_08660 PF10672 S-adenosylmethionine-dependent methyltransferase H2515_08660 PF17785 PUA-like domain H2515_08720 PF07729 FCD domain H2515_08720 PF00392 Bacterial regulatory proteins, gntR family H2515_08725 PF00364 Biotin-requiring enzyme H2515_08725 PF00289 Biotin carboxylase, N-terminal domain H2515_08725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H2515_08725 PF02785 Biotin carboxylase C-terminal domain H2515_08730 PF01425 Amidase H2515_08735 PF00289 Biotin carboxylase, N-terminal domain H2515_08735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H2515_08735 PF02785 Biotin carboxylase C-terminal domain H2515_08740 PF09347 Domain of unknown function (DUF1989) H2515_08750 PF00005 ABC transporter H2515_08755 PF00528 Binding-protein-dependent transport system inner membrane component H2515_08765 PF01131 DNA topoisomerase H2515_08765 PF01751 Toprim domain H2515_08775 PF01381 Helix-turn-helix H2515_08780 PF05973 Phage derived protein Gp49-like (DUF891) H2515_08810 PF13614 AAA domain H2515_08815 PF02195 ParB-like nuclease domain H2515_08815 PF17762 HTH domain found in ParB protein H2515_08825 PF00535 Glycosyl transferase family 2 H2515_08850 PF00872 Transposase, Mutator family H2515_08855 PF00271 Helicase conserved C-terminal domain H2515_08855 PF00176 SNF2 family N-terminal domain H2515_08885 PF00216 Bacterial DNA-binding protein H2515_08905 PF02534 Type IV secretory system Conjugative DNA transfer H2515_08910 PF01464 Transglycosylase SLT domain H2515_08935 PF04335 VirB8 protein H2515_08945 PF01381 Helix-turn-helix H2515_08995 PF00437 Type II/IV secretion system protein H2515_09035 PF08401 Domain of unknown function (DUF1738) H2515_09035 PF18818 Metallopeptidase superfamily domain H2515_09035 PF13362 Toprim domain H2515_09045 PF12728 Helix-turn-helix domain H2515_09060 PF01553 Acyltransferase H2515_09060 PF00501 AMP-binding enzyme H2515_09060 PF13193 AMP-binding enzyme C-terminal domain H2515_09065 PF04221 RelB antitoxin H2515_09070 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ H2515_09080 PF01381 Helix-turn-helix H2515_09080 PF00145 C-5 cytosine-specific DNA methylase H2515_09085 PF00436 Single-strand binding protein family H2515_09100 PF01695 IstB-like ATP binding protein H2515_09115 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT H2515_09135 PF02899 Phage integrase, N-terminal SAM-like domain H2515_09135 PF00589 Phage integrase family H2515_09180 PF00664 ABC transporter transmembrane region H2515_09180 PF00005 ABC transporter H2515_09185 PF00155 Aminotransferase class I and II H2515_09190 PF01370 NAD dependent epimerase/dehydratase family H2515_09190 PF02222 ATP-grasp domain H2515_09195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H2515_09195 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain H2515_09200 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain H2515_09200 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain H2515_09225 PF01066 CDP-alcohol phosphatidyltransferase H2515_09230 PF02151 UvrB/uvrC motif H2515_09230 PF08459 UvrC Helix-hairpin-helix N-terminal H2515_09230 PF01541 GIY-YIG catalytic domain H2515_09240 PF01132 Elongation factor P (EF-P) OB domain H2515_09240 PF08207 Elongation factor P (EF-P) KOW-like domain H2515_09240 PF09285 Elongation factor P, C-terminal H2515_09245 PF04977 Septum formation initiator H2515_09250 PF03952 Enolase, N-terminal domain H2515_09250 PF00113 Enolase, C-terminal TIM barrel domain H2515_09255 PF00793 DAHP synthetase I family H2515_09260 PF06418 CTP synthase N-terminus H2515_09260 PF00117 Glutamine amidotransferase class-I H2515_09265 PF00107 Zinc-binding dehydrogenase H2515_09265 PF08240 Alcohol dehydrogenase GroES-like domain H2515_09270 PF00271 Helicase conserved C-terminal domain H2515_09270 PF04851 Type III restriction enzyme, res subunit H2515_09270 PF02151 UvrB/uvrC motif H2515_09270 PF12344 Ultra-violet resistance protein B H2515_09270 PF17757 UvrB interaction domain H2515_09335 PF07690 Major Facilitator Superfamily H2515_09345 PF00581 Rhodanese-like domain H2515_09345 PF00753 Metallo-beta-lactamase superfamily H2515_09350 PF01545 Cation efflux family H2515_09355 PF08241 Methyltransferase domain H2515_09360 PF17149 Periplasmic sensor domain found in signal transduction proteins H2515_09360 PF00072 Response regulator receiver domain H2515_09360 PF00672 HAMP domain H2515_09360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_09360 PF00512 His Kinase A (phospho-acceptor) domain H2515_09360 PF01627 Hpt domain H2515_09365 PF00990 Diguanylate cyclase, GGDEF domain H2515_09365 PF03707 Bacterial signalling protein N terminal repeat H2515_09365 PF00563 EAL domain H2515_09380 PF12951 Passenger-associated-transport-repeat H2515_09395 PF06745 KaiC H2515_09405 PF00563 EAL domain H2515_09405 PF00990 Diguanylate cyclase, GGDEF domain H2515_09405 PF03707 Bacterial signalling protein N terminal repeat H2515_09410 PF06745 KaiC H2515_09425 PF00483 Nucleotidyl transferase H2515_09430 PF03552 Cellulose synthase H2515_09430 PF03170 Bacterial cellulose synthase subunit H2515_09430 PF07238 PilZ domain H2515_09430 PF00535 Glycosyl transferase family 2 H2515_09435 PF03170 Bacterial cellulose synthase subunit H2515_09450 PF01270 Glycosyl hydrolases family 8 H2515_09455 PF13419 Haloacid dehalogenase-like hydrolase H2515_09460 PF01258 Prokaryotic dksA/traR C4-type zinc finger H2515_09465 PF01979 Amidohydrolase family H2515_09470 PF01171 PP-loop family H2515_09470 PF09179 TilS substrate binding domain H2515_09470 PF11734 TilS substrate C-terminal domain H2515_09475 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H2515_09480 PF07733 Bacterial DNA polymerase III alpha NTPase domain H2515_09480 PF01336 OB-fold nucleic acid binding domain H2515_09480 PF02811 PHP domain H2515_09480 PF14579 Helix-hairpin-helix motif H2515_09480 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H2515_09485 PF01351 Ribonuclease HII H2515_09490 PF02684 Lipid-A-disaccharide synthetase H2515_09495 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H2515_09500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H2515_09500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain H2515_09505 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H2515_09505 PF00132 Bacterial transferase hexapeptide (six repeats) H2515_09510 PF07977 FabA-like domain H2515_09515 PF14602 Hexapeptide repeat of succinyl-transferase H2515_09515 PF00132 Bacterial transferase hexapeptide (six repeats) H2515_09515 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H2515_09525 PF07244 Surface antigen variable number repeat H2515_09525 PF01103 Surface antigen H2515_09530 PF02163 Peptidase family M50 H2515_09530 PF17820 PDZ domain H2515_09535 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H2515_09535 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H2515_09535 PF13288 DXP reductoisomerase C-terminal domain H2515_09545 PF01255 Putative undecaprenyl diphosphate synthase H2515_09550 PF01765 Ribosome recycling factor H2515_09555 PF00696 Amino acid kinase family H2515_09560 PF00889 Elongation factor TS H2515_09565 PF00318 Ribosomal protein S2 H2515_09575 PF13439 Glycosyltransferase Family 4 H2515_09575 PF00534 Glycosyl transferases group 1 H2515_09580 PF02541 Ppx/GppA phosphatase family H2515_09585 PF01895 PhoU domain H2515_09590 PF00005 ABC transporter H2515_09595 PF00528 Binding-protein-dependent transport system inner membrane component H2515_09600 PF00528 Binding-protein-dependent transport system inner membrane component H2515_09605 PF12849 PBP superfamily domain H2515_09610 PF11808 Phosphate regulon sensor protein PhoR H2515_09610 PF00512 His Kinase A (phospho-acceptor) domain H2515_09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_09610 PF00989 PAS fold H2515_09615 PF00486 Transcriptional regulatory protein, C terminal H2515_09615 PF00072 Response regulator receiver domain H2515_09620 PF00271 Helicase conserved C-terminal domain H2515_09620 PF00270 DEAD/DEAH box helicase H2515_09675 PF02637 GatB domain H2515_09675 PF02934 GatB/GatE catalytic domain H2515_09680 PF01425 Amidase H2515_09685 PF02686 Glu-tRNAGln amidotransferase C subunit H2515_09695 PF05494 MlaC protein H2515_09700 PF06463 Molybdenum Cofactor Synthesis C H2515_09700 PF04055 Radical SAM superfamily H2515_09715 PF04794 YdjC-like protein H2515_09720 PF00919 Uncharacterized protein family UPF0004 H2515_09720 PF01938 TRAM domain H2515_09720 PF04055 Radical SAM superfamily H2515_09730 PF01370 NAD dependent epimerase/dehydratase family H2515_09740 PF13243 Squalene-hopene cyclase C-terminal domain H2515_09740 PF13249 Squalene-hopene cyclase N-terminal domain H2515_09750 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H2515_09750 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H2515_09755 PF02556 Preprotein translocase subunit SecB H2515_09770 PF04073 Aminoacyl-tRNA editing domain H2515_09770 PF03129 Anticodon binding domain H2515_09770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H2515_09775 PF00582 Universal stress protein family H2515_09810 PF01812 5-formyltetrahydrofolate cyclo-ligase family H2515_09830 PF00905 Penicillin binding protein transpeptidase domain H2515_09830 PF03717 Penicillin-binding Protein dimerisation domain H2515_09835 PF01386 Ribosomal L25p family H2515_09835 PF14693 Ribosomal protein TL5, C-terminal domain H2515_09840 PF01195 Peptidyl-tRNA hydrolase H2515_09845 PF01926 50S ribosome-binding GTPase H2515_09845 PF06071 Protein of unknown function (DUF933) H2515_09850 PF11855 Protein of unknown function (DUF3375) H2515_09870 PF07883 Cupin domain H2515_09870 PF01381 Helix-turn-helix H2515_09875 PF00361 Proton-conducting membrane transporter H2515_09880 PF00146 NADH dehydrogenase H2515_09890 PF00361 Proton-conducting membrane transporter H2515_09895 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit H2515_09895 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit H2515_09895 PF00374 Nickel-dependent hydrogenase H2515_09900 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit H2515_09910 PF08406 CbbQ/NirQ/NorQ C-terminal H2515_09910 PF07728 AAA domain (dynein-related subfamily) H2515_09920 PF03466 LysR substrate binding domain H2515_09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2515_09930 PF00293 NUDIX domain H2515_09935 PF00293 NUDIX domain H2515_09940 PF00849 RNA pseudouridylate synthase H2515_09940 PF01479 S4 domain H2515_09945 PF04371 Porphyromonas-type peptidyl-arginine deiminase H2515_09950 PF01790 Prolipoprotein diacylglyceryl transferase H2515_09955 PF00580 UvrD/REP helicase N-terminal domain H2515_09955 PF13361 UvrD-like helicase C-terminal domain H2515_09960 PF01649 Ribosomal protein S20 H2515_09965 PF08402 TOBE domain H2515_09965 PF00005 ABC transporter H2515_09970 PF00528 Binding-protein-dependent transport system inner membrane component H2515_09980 PF00149 Calcineurin-like phosphoesterase H2515_09985 PF00570 HRDC domain H2515_09985 PF09382 RQC domain H2515_09985 PF00271 Helicase conserved C-terminal domain H2515_09985 PF16124 RecQ zinc-binding H2515_09985 PF00270 DEAD/DEAH box helicase H2515_09990 PF01491 Frataxin-like domain H2515_10015 PF03739 Lipopolysaccharide export system permease LptF/LptG H2515_10020 PF00883 Cytosol aminopeptidase family, catalytic domain H2515_10020 PF02789 Cytosol aminopeptidase family, N-terminal domain H2515_10025 PF04364 DNA polymerase III chi subunit, HolC H2515_10035 PF08264 Anticodon-binding domain of tRNA H2515_10035 PF00133 tRNA synthetases class I (I, L, M and V) H2515_10035 PF10458 Valyl tRNA synthetase tRNA binding arm H2515_10040 PF06965 Na+/H+ antiporter 1 H2515_10045 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H2515_10045 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H2515_10055 PF00440 Bacterial regulatory proteins, tetR family H2515_10055 PF16925 Tetracyclin repressor-like, C-terminal domain H2515_10060 PF01738 Dienelactone hydrolase family H2515_10065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H2515_10085 PF02397 Bacterial sugar transferase H2515_10090 PF01569 PAP2 superfamily H2515_10095 PF10531 SLBB domain H2515_10095 PF02563 Polysaccharide biosynthesis/export protein H2515_10100 PF13614 AAA domain H2515_10100 PF13807 G-rich domain on putative tyrosine kinase H2515_10100 PF02706 Chain length determinant protein H2515_10110 PF01943 Polysaccharide biosynthesis protein H2515_10110 PF14667 Polysaccharide biosynthesis C-terminal domain H2515_10140 PF13439 Glycosyltransferase Family 4 H2515_10140 PF00534 Glycosyl transferases group 1 H2515_10145 PF00534 Glycosyl transferases group 1 H2515_10145 PF13439 Glycosyltransferase Family 4 H2515_10160 PF00132 Bacterial transferase hexapeptide (six repeats) H2515_10165 PF13579 Glycosyl transferase 4-like domain H2515_10165 PF00534 Glycosyl transferases group 1 H2515_10170 PF01370 NAD dependent epimerase/dehydratase family H2515_10175 PF16363 GDP-mannose 4,6 dehydratase H2515_10180 PF16363 GDP-mannose 4,6 dehydratase H2515_10185 PF00483 Nucleotidyl transferase H2515_10185 PF01050 Mannose-6-phosphate isomerase H2515_10200 PF13439 Glycosyltransferase Family 4 H2515_10200 PF00534 Glycosyl transferases group 1 H2515_10205 PF13439 Glycosyltransferase Family 4 H2515_10205 PF00534 Glycosyl transferases group 1 H2515_10225 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase H2515_10230 PF16363 GDP-mannose 4,6 dehydratase H2515_10235 PF00483 Nucleotidyl transferase H2515_10250 PF05973 Phage derived protein Gp49-like (DUF891) H2515_10265 PF01909 Nucleotidyltransferase domain H2515_10275 PF04279 Intracellular septation protein A H2515_10280 PF03795 YCII-related domain H2515_10285 PF01722 BolA-like protein H2515_10290 PF00583 Acetyltransferase (GNAT) family H2515_10290 PF00696 Amino acid kinase family H2515_10300 PF00920 Dehydratase family H2515_10305 PF01594 AI-2E family transporter H2515_10310 PF00390 Malic enzyme, N-terminal domain H2515_10310 PF03949 Malic enzyme, NAD binding domain H2515_10315 PF01197 Ribosomal protein L31 H2515_10320 PF07497 Rho termination factor, RNA-binding domain H2515_10320 PF07498 Rho termination factor, N-terminal domain H2515_10320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H2515_10325 PF00085 Thioredoxin H2515_10335 PF00005 ABC transporter H2515_10340 PF12704 MacB-like periplasmic core domain H2515_10340 PF02687 FtsX-like permease family H2515_10355 PF00899 ThiF family H2515_10375 PF02405 Permease MlaE H2515_10380 PF00005 ABC transporter H2515_10385 PF02441 Flavoprotein H2515_10390 PF08245 Mur ligase middle domain H2515_10390 PF02875 Mur ligase family, glutamate ligase domain H2515_10390 PF01225 Mur ligase family, catalytic domain H2515_10400 PF05690 Thiazole biosynthesis protein ThiG H2515_10405 PF02597 ThiS family H2515_10405 PF05690 Thiazole biosynthesis protein ThiG H2515_10410 PF00756 Putative esterase H2515_10450 PF01734 Patatin-like phospholipase H2515_10460 PF04384 Iron-sulphur cluster assembly H2515_10465 PF00111 2Fe-2S iron-sulfur cluster binding domain H2515_10470 PF00012 Hsp70 protein H2515_10475 PF07743 HSCB C-terminal oligomerisation domain H2515_10480 PF01521 Iron-sulphur cluster biosynthesis H2515_10485 PF01592 NifU-like N terminal domain H2515_10490 PF00266 Aminotransferase class-V H2515_10495 PF02082 Transcriptional regulator H2515_10500 PF00132 Bacterial transferase hexapeptide (six repeats) H2515_10505 PF00588 SpoU rRNA Methylase family H2515_10510 PF00459 Inositol monophosphatase family H2515_10515 PF00990 Diguanylate cyclase, GGDEF domain H2515_10515 PF00563 EAL domain H2515_10515 PF03707 Bacterial signalling protein N terminal repeat H2515_10515 PF13188 PAS domain H2515_10520 PF13419 Haloacid dehalogenase-like hydrolase H2515_10525 PF00849 RNA pseudouridylate synthase H2515_10525 PF01479 S4 domain H2515_10530 PF12111 Polyribonucleotide phosphorylase C terminal H2515_10530 PF00575 S1 RNA binding domain H2515_10530 PF10150 Ribonuclease E/G family H2515_10535 PF09190 DALR domain H2515_10535 PF01406 tRNA synthetases class I (C) catalytic domain H2515_10540 PF00749 tRNA synthetases class I (E and Q), catalytic domain H2515_10545 PF17092 Penicillin-binding protein OB-like domain H2515_10545 PF00912 Transglycosylase H2515_10545 PF00905 Penicillin binding protein transpeptidase domain H2515_10550 PF00563 EAL domain H2515_10550 PF00990 Diguanylate cyclase, GGDEF domain H2515_10550 PF03707 Bacterial signalling protein N terminal repeat H2515_10560 PF13520 Amino acid permease H2515_10580 PF00486 Transcriptional regulatory protein, C terminal H2515_10580 PF00072 Response regulator receiver domain H2515_10585 PF02702 Osmosensitive K+ channel His kinase sensor domain H2515_10585 PF13493 Domain of unknown function (DUF4118) H2515_10585 PF13492 GAF domain H2515_10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_10585 PF00512 His Kinase A (phospho-acceptor) domain H2515_10595 PF03814 Potassium-transporting ATPase A subunit H2515_10605 PF02669 K+-transporting ATPase, c chain H2515_10620 PF01808 AICARFT/IMPCHase bienzyme H2515_10620 PF02142 MGS-like domain H2515_10625 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H2515_10625 PF02844 Phosphoribosylglycinamide synthetase, N domain H2515_10625 PF02843 Phosphoribosylglycinamide synthetase, C domain H2515_10630 PF01300 Telomere recombination H2515_10635 PF01218 Coproporphyrinogen III oxidase H2515_10640 PF01180 Dihydroorotate dehydrogenase H2515_10655 PF04185 Phosphoesterase family H2515_10665 PF02472 Biopolymer transport protein ExbD/TolR H2515_10670 PF01618 MotA/TolQ/ExbB proton channel family H2515_10690 PF00672 HAMP domain H2515_10690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_10690 PF00512 His Kinase A (phospho-acceptor) domain H2515_10695 PF00486 Transcriptional regulatory protein, C terminal H2515_10695 PF00072 Response regulator receiver domain H2515_10700 PF00929 Exonuclease H2515_10705 PF00296 Luciferase-like monooxygenase H2515_10725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H2515_10725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H2515_10725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H2515_10725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H2515_10740 PF00589 Phage integrase family H2515_10740 PF02899 Phage integrase, N-terminal SAM-like domain H2515_10820 PF03135 CagE, TrbE, VirB family, component of type IV transporter system H2515_10845 PF01695 IstB-like ATP binding protein H2515_10925 PF00817 impB/mucB/samB family H2515_10925 PF11798 IMS family HHH motif H2515_10925 PF13438 Domain of unknown function (DUF4113) H2515_10925 PF11799 impB/mucB/samB family C-terminal domain H2515_10960 PF00892 EamA-like transporter family H2515_10965 PF10502 Signal peptidase, peptidase S26 H2515_10975 PF01464 Transglycosylase SLT domain H2515_10985 PF02534 Type IV secretory system Conjugative DNA transfer H2515_11000 PF17762 HTH domain found in ParB protein H2515_11000 PF02195 ParB-like nuclease domain H2515_11005 PF13614 AAA domain H2515_11035 PF01131 DNA topoisomerase H2515_11035 PF01751 Toprim domain H2515_11045 PF03743 Bacterial conjugation TrbI-like protein H2515_11055 PF04335 VirB8 protein H2515_11090 PF03135 CagE, TrbE, VirB family, component of type IV transporter system H2515_11105 PF04956 TrbC/VIRB2 family H2515_11110 PF00437 Type II/IV secretion system protein H2515_11240 PF00437 Type II/IV secretion system protein H2515_11240 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H2515_11255 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H2515_11255 PF00437 Type II/IV secretion system protein H2515_11275 PF13005 zinc-finger binding domain of transposase IS66 H2515_11275 PF13007 Transposase C of IS166 homeodomain H2515_11275 PF13817 IS66 C-terminal element H2515_11275 PF03050 Transposase IS66 family H2515_11315 PF00072 Response regulator receiver domain H2515_11320 PF00072 Response regulator receiver domain H2515_11325 PF00672 HAMP domain H2515_11325 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H2515_11325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_11325 PF00512 His Kinase A (phospho-acceptor) domain H2515_11325 PF00072 Response regulator receiver domain H2515_11325 PF01627 Hpt domain H2515_11330 PF00990 Diguanylate cyclase, GGDEF domain H2515_11340 PF00216 Bacterial DNA-binding protein H2515_11345 PF00216 Bacterial DNA-binding protein H2515_11355 PF00563 EAL domain H2515_11355 PF03707 Bacterial signalling protein N terminal repeat H2515_11355 PF00990 Diguanylate cyclase, GGDEF domain H2515_11360 PF01209 ubiE/COQ5 methyltransferase family H2515_11365 PF00563 EAL domain H2515_11365 PF08668 HDOD domain H2515_11375 PF02954 Bacterial regulatory protein, Fis family H2515_11375 PF00072 Response regulator receiver domain H2515_11375 PF00158 Sigma-54 interaction domain H2515_11380 PF00460 Flagella basal body rod protein H2515_11385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H2515_11385 PF00460 Flagella basal body rod protein H2515_11390 PF13861 FlgD Tudor-like domain H2515_11390 PF03963 Flagellar hook capping protein - N-terminal region H2515_11390 PF13860 FlgD Ig-like domain H2515_11395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H2515_11395 PF07559 Flagellar basal body protein FlaE H2515_11395 PF00460 Flagella basal body rod protein H2515_11400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H2515_11400 PF00460 Flagella basal body rod protein H2515_11405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H2515_11405 PF00460 Flagella basal body rod protein H2515_11410 PF02107 Flagellar L-ring protein H2515_11415 PF02119 Flagellar P-ring protein H2515_11420 PF10135 Rod binding protein H2515_11420 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H2515_11425 PF00460 Flagella basal body rod protein H2515_11425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H2515_11445 PF00534 Glycosyl transferases group 1 H2515_11445 PF00535 Glycosyl transferase family 2 H2515_11450 PF00669 Bacterial flagellin N-terminal helical region H2515_11450 PF00700 Bacterial flagellin C-terminal helical region H2515_11450 PF07196 Flagellin hook IN motif H2515_11455 PF07196 Flagellin hook IN motif H2515_11455 PF07195 Flagellar hook-associated protein 2 C-terminus H2515_11455 PF02465 Flagellar hook-associated protein 2 N-terminus H2515_11465 PF02049 Flagellar hook-basal body complex protein FliE H2515_11470 PF08345 Flagellar M-ring protein C-terminal H2515_11470 PF01514 Secretory protein of YscJ/FliF family H2515_11475 PF01706 FliG C-terminal domain H2515_11475 PF14842 FliG N-terminal domain H2515_11475 PF14841 FliG middle domain H2515_11485 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H2515_11485 PF02154 Flagellar motor switch protein FliM H2515_11490 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H2515_11495 PF00813 FliP family H2515_11505 PF04545 Sigma-70, region 4 H2515_11505 PF04539 Sigma-70 region 3 H2515_11505 PF04542 Sigma-70 region 2 H2515_11530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H2515_11530 PF18269 T3SS EscN ATPase C-terminal domain H2515_11540 PF01313 Bacterial export proteins, family 3 H2515_11545 PF01311 Bacterial export proteins, family 1 H2515_11550 PF01312 FlhB HrpN YscU SpaS Family H2515_11555 PF00771 FHIPEP family H2515_11565 PF01618 MotA/TolQ/ExbB proton channel family H2515_11570 PF13677 Membrane MotB of proton-channel complex MotA/MotB H2515_11570 PF00691 OmpA family H2515_11575 PF00072 Response regulator receiver domain H2515_11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_11585 PF01584 CheW-like domain H2515_11585 PF02895 Signal transducing histidine kinase, homodimeric domain H2515_11585 PF07194 P2 response regulator binding domain H2515_11585 PF01627 Hpt domain H2515_11600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H2515_11600 PF08447 PAS fold H2515_11600 PF13426 PAS domain H2515_11605 PF01584 CheW-like domain H2515_11605 PF00072 Response regulator receiver domain H2515_11610 PF00672 HAMP domain H2515_11610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H2515_11610 PF02743 Cache domain H2515_11635 PF00510 Cytochrome c oxidase subunit III H2515_11640 PF00115 Cytochrome C and Quinol oxidase polypeptide I H2515_11645 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H2515_11645 PF06481 COX Aromatic Rich Motif H2515_11660 PF00117 Glutamine amidotransferase class-I H2515_11660 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H2515_11665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H2515_11665 PF02142 MGS-like domain H2515_11665 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H2515_11670 PF01272 Transcription elongation factor, GreA/GreB, C-term H2515_11670 PF03449 Transcription elongation factor, N-terminal H2515_11675 PF02673 Bacitracin resistance protein BacA H2515_11680 PF01040 UbiA prenyltransferase family H2515_11695 PF00510 Cytochrome c oxidase subunit III H2515_11700 PF00115 Cytochrome C and Quinol oxidase polypeptide I H2515_11705 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H2515_11705 PF06481 COX Aromatic Rich Motif H2515_11720 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H2515_11725 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H2515_11725 PF01243 Pyridoxamine 5'-phosphate oxidase H2515_11735 PF00694 Aconitase C-terminal domain H2515_11740 PF00330 Aconitase family (aconitate hydratase) H2515_11745 PF08241 Methyltransferase domain H2515_11760 PF00300 Histidine phosphatase superfamily (branch 1) H2515_11770 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H2515_11770 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H2515_11770 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H2515_11775 PF00005 ABC transporter H2515_11775 PF00664 ABC transporter transmembrane region H2515_11780 PF13439 Glycosyltransferase Family 4 H2515_11780 PF00534 Glycosyl transferases group 1 H2515_11785 PF13439 Glycosyltransferase Family 4 H2515_11785 PF00534 Glycosyl transferases group 1 H2515_11790 PF04101 Glycosyltransferase family 28 C-terminal domain H2515_11790 PF03033 Glycosyltransferase family 28 N-terminal domain H2515_11815 PF01370 NAD dependent epimerase/dehydratase family H2515_11830 PF00950 ABC 3 transport family H2515_11840 PF00005 ABC transporter H2515_11850 PF01523 Putative modulator of DNA gyrase H2515_11855 PF00795 Carbon-nitrogen hydrolase H2515_11860 PF00571 CBS domain H2515_11860 PF03471 Transporter associated domain H2515_11865 PF02130 Uncharacterized protein family UPF0054 H2515_11870 PF02562 PhoH-like protein H2515_11875 PF00919 Uncharacterized protein family UPF0004 H2515_11875 PF01938 TRAM domain H2515_11875 PF04055 Radical SAM superfamily H2515_11885 PF00398 Ribosomal RNA adenine dimethylase H2515_11895 PF01040 UbiA prenyltransferase family H2515_11900 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H2515_11900 PF00270 DEAD/DEAH box helicase H2515_11900 PF00271 Helicase conserved C-terminal domain H2515_11900 PF18074 Primosomal protein N C-terminal domain H2515_11900 PF17764 3′ DNA-binding domain (3′BD) H2515_11905 PF00313 'Cold-shock' DNA-binding domain H2515_11910 PF12343 Cold shock protein DEAD box A H2515_11910 PF00271 Helicase conserved C-terminal domain H2515_11910 PF03880 DbpA RNA binding domain H2515_11910 PF00270 DEAD/DEAH box helicase H2515_11925 PF00485 Phosphoribulokinase / Uridine kinase family H2515_11930 PF02219 Methylenetetrahydrofolate reductase H2515_11935 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain H2515_11935 PF05221 S-adenosyl-L-homocysteine hydrolase H2515_11940 PF02773 S-adenosylmethionine synthetase, C-terminal domain H2515_11940 PF02772 S-adenosylmethionine synthetase, central domain H2515_11940 PF00438 S-adenosylmethionine synthetase, N-terminal domain H2515_11950 PF00294 pfkB family carbohydrate kinase H2515_11955 PF00581 Rhodanese-like domain H2515_11965 PF00343 Carbohydrate phosphorylase H2515_11970 PF01676 Metalloenzyme superfamily H2515_11970 PF06415 BPG-independent PGAM N-terminus (iPGM_N) H2515_11980 PF03572 Peptidase family S41 H2515_11980 PF13180 PDZ domain H2515_11985 PF01965 DJ-1/PfpI family H2515_11995 PF02617 ATP-dependent Clp protease adaptor protein ClpS H2515_12000 PF10431 C-terminal, D2-small domain, of ClpB protein H2515_12000 PF02861 Clp amino terminal domain, pathogenicity island component H2515_12000 PF17871 AAA lid domain H2515_12000 PF07724 AAA domain (Cdc48 subfamily) H2515_12000 PF00004 ATPase family associated with various cellular activities (AAA) H2515_12005 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H2515_12010 PF03167 Uracil DNA glycosylase superfamily H2515_12020 PF08681 Protein of unknown function (DUF1778) H2515_12035 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) H2515_12060 PF00719 Inorganic pyrophosphatase H2515_12065 PF02348 Cytidylyltransferase H2515_12070 PF03966 Trm112p-like protein H2515_12075 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H2515_12090 PF02472 Biopolymer transport protein ExbD/TolR H2515_12095 PF01618 MotA/TolQ/ExbB proton channel family H2515_12100 PF00753 Metallo-beta-lactamase superfamily H2515_12100 PF03772 Competence protein H2515_12110 PF00005 ABC transporter H2515_12115 PF02687 FtsX-like permease family H2515_12115 PF12704 MacB-like periplasmic core domain H2515_12120 PF00152 tRNA synthetases class II (D, K and N) H2515_12120 PF01336 OB-fold nucleic acid binding domain H2515_12140 PF17768 RecJ OB domain H2515_12140 PF02272 DHHA1 domain H2515_12140 PF01368 DHH family H2515_12150 PF00291 Pyridoxal-phosphate dependent enzyme H2515_12155 PF00742 Homoserine dehydrogenase H2515_12155 PF01842 ACT domain H2515_12155 PF03447 Homoserine dehydrogenase, NAD binding domain H2515_12160 PF00155 Aminotransferase class I and II H2515_12165 PF04430 Protein of unknown function (DUF498/DUF598) H2515_12170 PF04539 Sigma-70 region 3 H2515_12170 PF04545 Sigma-70, region 4 H2515_12170 PF00140 Sigma-70 factor, region 1.2 H2515_12170 PF04542 Sigma-70 region 2 H2515_12180 PF01975 Survival protein SurE H2515_12190 PF03951 Glutamine synthetase, beta-Grasp domain H2515_12190 PF00120 Glutamine synthetase, catalytic domain H2515_12195 PF16916 Dimerisation domain of Zinc Transporter H2515_12195 PF01545 Cation efflux family H2515_12205 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H2515_12205 PF06827 Zinc finger found in FPG and IleRS H2515_12205 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H2515_12210 PF00916 Sulfate permease family H2515_12210 PF01740 STAS domain H2515_12215 PF01427 D-ala-D-ala dipeptidase H2515_12230 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system H2515_12240 PF13603 Leucyl-tRNA synthetase, Domain 2 H2515_12240 PF08264 Anticodon-binding domain of tRNA H2515_12240 PF00133 tRNA synthetases class I (I, L, M and V) H2515_12250 PF14840 Processivity clamp loader gamma complex DNA pol III C-term H2515_12250 PF06144 DNA polymerase III, delta subunit H2515_12255 PF00171 Aldehyde dehydrogenase family H2515_12260 PF03099 Biotin/lipoate A/B protein ligase family H2515_12260 PF02237 Biotin protein ligase C terminal domain H2515_12265 PF03309 Type III pantothenate kinase H2515_12270 PF01513 ATP-NAD kinase H2515_12275 PF02463 RecF/RecN/SMC N terminal domain H2515_12280 PF00512 His Kinase A (phospho-acceptor) domain H2515_12280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_12290 PF00158 Sigma-54 interaction domain H2515_12290 PF00072 Response regulator receiver domain H2515_12300 PF00483 Nucleotidyl transferase H2515_12315 PF11455 Protein of unknown function (DUF3018) H2515_12325 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) H2515_12325 PF11867 Domain of unknown function (DUF3387) H2515_12325 PF18766 SWI2/SNF2 ATPase H2515_12395 PF00873 AcrB/AcrD/AcrF family H2515_12400 PF13533 Biotin-lipoyl like H2515_12430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H2515_12430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H2515_12430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H2515_12430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H2515_12435 PF01048 Phosphorylase superfamily H2515_12440 PF01791 DeoC/LacD family aldolase H2515_12445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H2515_12455 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H2515_12460 PF01979 Amidohydrolase family H2515_12465 PF01180 Dihydroorotate dehydrogenase H2515_12470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H2515_12470 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_12475 PF00795 Carbon-nitrogen hydrolase H2515_12480 PF00202 Aminotransferase class-III H2515_12485 PF01381 Helix-turn-helix H2515_12485 PF07883 Cupin domain H2515_12495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2515_12495 PF03466 LysR substrate binding domain H2515_12505 PF12804 MobA-like NTP transferase domain H2515_12515 PF01425 Amidase H2515_12525 PF02625 XdhC and CoxI family H2515_12525 PF13478 XdhC Rossmann domain H2515_12530 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) H2515_12540 PF03450 CO dehydrogenase flavoprotein C-terminal domain H2515_12540 PF00941 FAD binding domain in molybdopterin dehydrogenase H2515_12545 PF01799 [2Fe-2S] binding domain H2515_12545 PF00111 2Fe-2S iron-sulfur cluster binding domain H2515_12550 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase H2515_12550 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain H2515_12560 PF00962 Adenosine/AMP deaminase H2515_12565 PF01979 Amidohydrolase family H2515_12580 PF02472 Biopolymer transport protein ExbD/TolR H2515_12585 PF01618 MotA/TolQ/ExbB proton channel family H2515_12595 PF01327 Polypeptide deformylase H2515_12605 PF00596 Class II Aldolase and Adducin N-terminal domain H2515_12615 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain H2515_12615 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain H2515_12620 PF03079 ARD/ARD' family H2515_12625 PF02578 Multi-copper polyphenol oxidoreductase laccase H2515_12630 PF01479 S4 domain H2515_12630 PF00849 RNA pseudouridylate synthase H2515_12635 PF13525 Outer membrane lipoprotein H2515_12640 PF00543 Nitrogen regulatory protein P-II H2515_12645 PF02540 NAD synthase H2515_12645 PF00795 Carbon-nitrogen hydrolase H2515_12650 PF00549 CoA-ligase H2515_12650 PF02629 CoA binding domain H2515_12660 PF08442 ATP-grasp domain H2515_12660 PF00549 CoA-ligase H2515_12665 PF00180 Isocitrate/isopropylmalate dehydrogenase H2515_12670 PF00330 Aconitase family (aconitate hydratase) H2515_12675 PF00749 tRNA synthetases class I (E and Q), catalytic domain H2515_12680 PF01464 Transglycosylase SLT domain H2515_12680 PF01476 LysM domain H2515_12690 PF00923 Transaldolase/Fructose-6-phosphate aldolase H2515_12695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2515_12695 PF03466 LysR substrate binding domain H2515_12710 PF00034 Cytochrome c H2515_12715 PF00106 short chain dehydrogenase H2515_12720 PF00355 Rieske [2Fe-2S] domain H2515_12720 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal H2515_12725 PF00032 Cytochrome b(C-terminal)/b6/petD H2515_12725 PF00033 Cytochrome b/b6/petB H2515_12745 PF02446 4-alpha-glucanotransferase H2515_12750 PF00128 Alpha amylase, catalytic domain H2515_12750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H2515_12750 PF11941 Domain of unknown function (DUF3459) H2515_12755 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H2515_12755 PF00128 Alpha amylase, catalytic domain H2515_12760 PF16657 Maltogenic Amylase, C-terminal domain H2515_12760 PF00128 Alpha amylase, catalytic domain H2515_12780 PF00230 Major intrinsic protein H2515_12805 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_12805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H2515_12810 PF00692 dUTPase H2515_12815 PF10609 NUBPL iron-transfer P-loop NTPase H2515_12825 PF01113 Dihydrodipicolinate reductase, N-terminus H2515_12825 PF05173 Dihydrodipicolinate reductase, C-terminus H2515_12830 PF00684 DnaJ central domain H2515_12830 PF01556 DnaJ C terminal domain H2515_12830 PF00226 DnaJ domain H2515_12835 PF00012 Hsp70 protein H2515_12840 PF01025 GrpE H2515_12845 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding H2515_12845 PF01628 HrcA protein C terminal domain H2515_12850 PF00471 Ribosomal protein L33 H2515_12855 PF00830 Ribosomal L28 family H2515_12860 PF01588 Putative tRNA binding domain H2515_12860 PF09334 tRNA synthetases class I (M) H2515_12865 PF00793 DAHP synthetase I family H2515_12865 PF18152 DAHP synthase ferredoxin-like domain H2515_12870 PF10415 Fumarase C C-terminus H2515_12870 PF00206 Lyase H2515_12875 PF01432 Peptidase family M3 H2515_12875 PF08439 Oligopeptidase F H2515_12895 PF08323 Starch synthase catalytic domain H2515_12895 PF00534 Glycosyl transferases group 1 H2515_12900 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain H2515_12900 PF00753 Metallo-beta-lactamase superfamily H2515_12900 PF10996 Beta-Casp domain H2515_12910 PF10576 Iron-sulfur binding domain of endonuclease III H2515_12910 PF00633 Helix-hairpin-helix motif H2515_12910 PF00730 HhH-GPD superfamily base excision DNA repair protein H2515_12935 PF11953 Domain of unknown function (DUF3470) H2515_12935 PF00037 4Fe-4S binding domain H2515_12940 PF00175 Oxidoreductase NAD-binding domain H2515_12940 PF00111 2Fe-2S iron-sulfur cluster binding domain H2515_12940 PF00970 Oxidoreductase FAD-binding domain H2515_12945 PF03063 Prismane/CO dehydrogenase family H2515_12985 PF02463 RecF/RecN/SMC N terminal domain H2515_13030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H2515_13050 PF01443 Viral (Superfamily 1) RNA helicase H2515_13050 PF03389 MobA/MobL family H2515_13050 PF17841 BID domain of Bartonella effector protein (Bep) H2515_13095 PF00589 Phage integrase family H2515_13105 PF01728 FtsJ-like methyltransferase H2515_13110 PF01985 CRS1 / YhbY (CRM) domain H2515_13115 PF04379 ApaG domain H2515_13120 PF01209 ubiE/COQ5 methyltransferase family H2515_13125 PF03144 Elongation factor Tu domain 2 H2515_13125 PF00009 Elongation factor Tu GTP binding domain H2515_13125 PF00679 Elongation factor G C-terminus H2515_13140 PF01678 Diaminopimelate epimerase H2515_13155 PF02899 Phage integrase, N-terminal SAM-like domain H2515_13155 PF00589 Phage integrase family H2515_13160 PF00227 Proteasome subunit H2515_13165 PF07724 AAA domain (Cdc48 subfamily) H2515_13165 PF00004 ATPase family associated with various cellular activities (AAA) H2515_13175 PF00140 Sigma-70 factor, region 1.2 H2515_13175 PF04542 Sigma-70 region 2 H2515_13175 PF04545 Sigma-70, region 4 H2515_13180 PF18075 FtsX extracellular domain H2515_13185 PF00005 ABC transporter H2515_13190 PF02881 SRP54-type protein, helical bundle domain H2515_13190 PF00448 SRP54-type protein, GTPase domain H2515_13200 PF01467 Cytidylyltransferase-like H2515_13205 PF00037 4Fe-4S binding domain H2515_13210 PF00350 Dynamin family H2515_13215 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H2515_13215 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H2515_13215 PF06827 Zinc finger found in FPG and IleRS H2515_13220 PF17827 PrmC N-terminal domain H2515_13220 PF05175 Methyltransferase small domain H2515_13225 PF03462 PCRF domain H2515_13225 PF00472 RF-1 domain H2515_13230 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H2515_13230 PF01488 Shikimate / quinate 5-dehydrogenase H2515_13230 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H2515_13245 PF08544 GHMP kinases C terminal H2515_13245 PF00288 GHMP kinases N terminal domain H2515_13255 PF14572 Phosphoribosyl synthetase-associated domain H2515_13255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H2515_13265 PF00589 Phage integrase family H2515_13315 PF11798 IMS family HHH motif H2515_13315 PF11799 impB/mucB/samB family C-terminal domain H2515_13315 PF00817 impB/mucB/samB family H2515_13315 PF13438 Domain of unknown function (DUF4113) H2515_13345 PF10005 zinc-ribbon domain H2515_13345 PF15887 Putative zinc-binding metallo-peptidase H2515_13350 PF07690 Major Facilitator Superfamily H2515_13390 PF01047 MarR family H2515_13395 PF17074 Darcynin, domain of unknown function H2515_13410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H2515_13445 PF01381 Helix-turn-helix H2515_13460 PF00011 Hsp20/alpha crystallin family H2515_13465 PF13180 PDZ domain H2515_13475 PF05973 Phage derived protein Gp49-like (DUF891) H2515_13480 PF01381 Helix-turn-helix H2515_13485 PF00990 Diguanylate cyclase, GGDEF domain H2515_13485 PF00563 EAL domain H2515_13485 PF03707 Bacterial signalling protein N terminal repeat H2515_13490 PF07238 PilZ domain H2515_13490 PF00535 Glycosyl transferase family 2 H2515_13500 PF00563 EAL domain H2515_13500 PF00990 Diguanylate cyclase, GGDEF domain H2515_13500 PF13188 PAS domain H2515_13500 PF03707 Bacterial signalling protein N terminal repeat H2515_13540 PF02954 Bacterial regulatory protein, Fis family H2515_13540 PF00072 Response regulator receiver domain H2515_13540 PF00158 Sigma-54 interaction domain H2515_13555 PF09364 XFP N-terminal domain H2515_13555 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase H2515_13555 PF09363 XFP C-terminal domain H2515_13570 PF00557 Metallopeptidase family M24 H2515_13570 PF05195 Aminopeptidase P, N-terminal domain H2515_13580 PF18073 Rubredoxin metal binding domain H2515_13585 PF00842 Alanine racemase, C-terminal domain H2515_13585 PF01168 Alanine racemase, N-terminal domain H2515_13590 PF03796 DnaB-like helicase C terminal domain H2515_13590 PF00772 DnaB-like helicase N terminal domain H2515_13595 PF01281 Ribosomal protein L9, N-terminal domain H2515_13595 PF03948 Ribosomal protein L9, C-terminal domain H2515_13605 PF01084 Ribosomal protein S18 H2515_13610 PF01250 Ribosomal protein S6 H2515_13615 PF00933 Glycosyl hydrolase family 3 N terminal domain H2515_13620 PF13520 Amino acid permease H2515_13630 PF01938 TRAM domain H2515_13630 PF05958 tRNA (Uracil-5-)-methyltransferase H2515_13650 PF00291 Pyridoxal-phosphate dependent enzyme H2515_13655 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H2515_13660 PF01145 SPFH domain / Band 7 family H2515_13670 PF00128 Alpha amylase, catalytic domain H2515_13670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H2515_13670 PF02806 Alpha amylase, C-terminal all-beta domain H2515_13675 PF00483 Nucleotidyl transferase H2515_13685 PF03065 Glycosyl hydrolase family 57 H2515_13685 PF09095 Domain of unknown function (DUF1926) H2515_13685 PF09094 Domain of unknown function (DUF1925) H2515_13690 PF00480 ROK family H2515_13695 PF01177 Asp/Glu/Hydantoin racemase H2515_13700 PF04286 Protein of unknown function (DUF445) H2515_13725 PF02384 N-6 DNA Methylase H2515_13730 PF00436 Single-strand binding protein family H2515_13735 PF17760 UvrA interaction domain H2515_13735 PF17755 UvrA DNA-binding domain H2515_13745 PF00085 Thioredoxin H2515_13750 PF13180 PDZ domain H2515_13755 PF02899 Phage integrase, N-terminal SAM-like domain H2515_13755 PF00589 Phage integrase family H2515_13765 PF01245 Ribosomal protein L19 H2515_13770 PF01746 tRNA (Guanine-1)-methyltransferase H2515_13775 PF05239 PRC-barrel domain H2515_13775 PF01782 RimM N-terminal domain H2515_13780 PF00886 Ribosomal protein S16 H2515_13785 PF00448 SRP54-type protein, GTPase domain H2515_13785 PF02978 Signal peptide binding domain H2515_13785 PF02881 SRP54-type protein, helical bundle domain H2515_13795 PF13417 Glutathione S-transferase, N-terminal domain H2515_13810 PF00437 Type II/IV secretion system protein H2515_13815 PF00437 Type II/IV secretion system protein H2515_13820 PF01168 Alanine racemase, N-terminal domain H2515_13825 PF14748 Pyrroline-5-carboxylate reductase dimerisation H2515_13825 PF03807 NADP oxidoreductase coenzyme F420-dependent H2515_13830 PF02325 YGGT family H2515_13835 PF02594 Uncharacterised ACR, YggU family COG1872 H2515_13840 PF06968 Biotin and Thiamin Synthesis associated domain H2515_13840 PF04055 Radical SAM superfamily H2515_13850 PF00529 HlyD membrane-fusion protein of T1SS H2515_13850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2515_13855 PF00696 Amino acid kinase family H2515_13860 PF00440 Bacterial regulatory proteins, tetR family H2515_13880 PF00111 2Fe-2S iron-sulfur cluster binding domain H2515_13880 PF00970 Oxidoreductase FAD-binding domain H2515_13880 PF00175 Oxidoreductase NAD-binding domain H2515_13885 PF00929 Exonuclease H2515_13890 PF03649 Uncharacterised protein family (UPF0014) H2515_13895 PF04377 Arginine-tRNA-protein transferase, C terminus H2515_13895 PF04376 Arginine-tRNA-protein transferase, N terminus H2515_13900 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H2515_13905 PF01435 Peptidase family M48 H2515_13915 PF08241 Methyltransferase domain H2515_13920 PF00561 alpha/beta hydrolase fold H2515_13925 PF00155 Aminotransferase class I and II H2515_13930 PF00156 Phosphoribosyl transferase domain H2515_13935 PF00588 SpoU rRNA Methylase family H2515_13940 PF03781 Sulfatase-modifying factor enzyme 1 H2515_13940 PF12867 DinB superfamily H2515_13945 PF00155 Aminotransferase class I and II H2515_13950 PF03279 Bacterial lipid A biosynthesis acyltransferase H2515_13955 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H2515_13965 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H2515_13970 PF00535 Glycosyl transferase family 2 H2515_13985 PF05685 Putative restriction endonuclease H2515_13990 PF13439 Glycosyltransferase Family 4 H2515_13990 PF00534 Glycosyl transferases group 1 H2515_13995 PF01522 Polysaccharide deacetylase H2515_14000 PF00535 Glycosyl transferase family 2 H2515_14005 PF00293 NUDIX domain H2515_14010 PF01960 ArgJ family H2515_14015 PF02810 SEC-C motif H2515_14015 PF01043 SecA preprotein cross-linking domain H2515_14015 PF07516 SecA Wing and Scaffold domain H2515_14015 PF07517 SecA DEAD-like domain H2515_14025 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H2515_14030 PF00043 Glutathione S-transferase, C-terminal domain H2515_14030 PF02798 Glutathione S-transferase, N-terminal domain H2515_14035 PF00501 AMP-binding enzyme H2515_14040 PF01743 Poly A polymerase head domain H2515_14040 PF13735 tRNA nucleotidyltransferase domain 2 putative H2515_14040 PF12627 Probable RNA and SrmB- binding site of polymerase A H2515_14055 PF02381 MraZ protein, putative antitoxin-like H2515_14060 PF01795 MraW methylase family H2515_14070 PF03717 Penicillin-binding Protein dimerisation domain H2515_14070 PF00905 Penicillin binding protein transpeptidase domain H2515_14075 PF08245 Mur ligase middle domain H2515_14075 PF02875 Mur ligase family, glutamate ligase domain H2515_14075 PF01225 Mur ligase family, catalytic domain H2515_14080 PF01225 Mur ligase family, catalytic domain H2515_14080 PF02875 Mur ligase family, glutamate ligase domain H2515_14080 PF08245 Mur ligase middle domain H2515_14085 PF00953 Glycosyl transferase family 4 H2515_14085 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 H2515_14090 PF08245 Mur ligase middle domain H2515_14090 PF02875 Mur ligase family, glutamate ligase domain H2515_14095 PF01098 Cell cycle protein H2515_14100 PF03033 Glycosyltransferase family 28 N-terminal domain H2515_14100 PF04101 Glycosyltransferase family 28 C-terminal domain H2515_14105 PF08245 Mur ligase middle domain H2515_14105 PF01225 Mur ligase family, catalytic domain H2515_14105 PF02875 Mur ligase family, glutamate ligase domain H2515_14110 PF01565 FAD binding domain H2515_14110 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H2515_14115 PF07478 D-ala D-ala ligase C-terminus H2515_14115 PF01820 D-ala D-ala ligase N-terminus H2515_14120 PF03799 Cell division protein FtsQ H2515_14120 PF08478 POTRA domain, FtsQ-type H2515_14125 PF02491 SHS2 domain inserted in FTSA H2515_14130 PF00091 Tubulin/FtsZ family, GTPase domain H2515_14130 PF12327 FtsZ family, C-terminal domain H2515_14145 PF01220 Dehydroquinase class II H2515_14150 PF00364 Biotin-requiring enzyme H2515_14155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H2515_14155 PF00289 Biotin carboxylase, N-terminal domain H2515_14155 PF02785 Biotin carboxylase C-terminal domain H2515_14170 PF02954 Bacterial regulatory protein, Fis family H2515_14175 PF10145 Phage-related minor tail protein H2515_14175 PF01551 Peptidase family M23 H2515_14175 PF01464 Transglycosylase SLT domain H2515_14180 PF04386 Stringent starvation protein B H2515_14190 PF01522 Polysaccharide deacetylase H2515_14195 PF04820 Tryptophan halogenase H2515_14220 PF00999 Sodium/hydrogen exchanger family H2515_14240 PF00109 Beta-ketoacyl synthase, N-terminal domain H2515_14240 PF02801 Beta-ketoacyl synthase, C-terminal domain H2515_14285 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H2515_14290 PF07072 Cell division protein H2515_14295 PF01121 Dephospho-CoA kinase H2515_14300 PF01478 Type IV leader peptidase family H2515_14300 PF06750 Bacterial Peptidase A24 N-terminal domain H2515_14305 PF02954 Bacterial regulatory protein, Fis family H2515_14305 PF00072 Response regulator receiver domain H2515_14305 PF00158 Sigma-54 interaction domain H2515_14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_14310 PF00512 His Kinase A (phospho-acceptor) domain H2515_14315 PF00437 Type II/IV secretion system protein H2515_14315 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H2515_14320 PF01488 Shikimate / quinate 5-dehydrogenase H2515_14320 PF08501 Shikimate dehydrogenase substrate binding domain H2515_14320 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H2515_14325 PF03702 Anhydro-N-acetylmuramic acid kinase H2515_14330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H2515_14335 PF00762 Ferrochelatase H2515_14345 PF13417 Glutathione S-transferase, N-terminal domain H2515_14345 PF00043 Glutathione S-transferase, C-terminal domain H2515_14350 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H2515_14360 PF03372 Endonuclease/Exonuclease/phosphatase family H2515_14365 PF05175 Methyltransferase small domain H2515_14370 PF07690 Major Facilitator Superfamily H2515_14375 PF12795 Mechanosensitive ion channel porin domain H2515_14375 PF00924 Mechanosensitive ion channel H2515_14375 PF12794 Mechanosensitive ion channel inner membrane domain 1 H2515_14380 PF05746 DALR anticodon binding domain H2515_14380 PF00750 tRNA synthetases class I (R) H2515_14380 PF03485 Arginyl tRNA synthetase N terminal domain H2515_14395 PF00398 Ribosomal RNA adenine dimethylase H2515_14405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H2515_14410 PF01479 S4 domain H2515_14415 PF00005 ABC transporter H2515_14430 PF02470 MlaD protein H2515_14435 PF02405 Permease MlaE H2515_14440 PF00005 ABC transporter H2515_14445 PF02675 S-adenosylmethionine decarboxylase H2515_14450 PF17284 Spermidine synthase tetramerisation domain H2515_14455 PF00300 Histidine phosphatase superfamily (branch 1) H2515_14460 PF00158 Sigma-54 interaction domain H2515_14460 PF00072 Response regulator receiver domain H2515_14470 PF00512 His Kinase A (phospho-acceptor) domain H2515_14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2515_14480 PF04362 Bacterial Fe(2+) trafficking H2515_14485 PF00730 HhH-GPD superfamily base excision DNA repair protein H2515_14485 PF14815 NUDIX domain H2515_14485 PF00633 Helix-hairpin-helix motif H2515_14495 PF00391 PEP-utilising enzyme, mobile domain H2515_14495 PF05524 PEP-utilising enzyme, N-terminal H2515_14495 PF02896 PEP-utilising enzyme, TIM barrel domain H2515_14500 PF00381 PTS HPr component phosphorylation site H2515_14510 PF03668 P-loop ATPase protein family H2515_14515 PF07475 HPr Serine kinase C-terminal domain H2515_14515 PF02603 HPr Serine kinase N terminus H2515_14520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H2515_14520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H2515_14525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H2515_14530 PF04963 Sigma-54 factor, core binding domain H2515_14530 PF00309 Sigma-54 factor, Activator interacting domain (AID) H2515_14530 PF04552 Sigma-54, DNA binding domain H2515_14535 PF00005 ABC transporter H2515_14540 PF03968 OstA-like protein H2515_14540 PF04453 LPS transport system D H2515_14555 PF00571 CBS domain H2515_14555 PF01380 SIS domain H2515_14570 PF00483 Nucleotidyl transferase H2515_14575 PF01636 Phosphotransferase enzyme family H2515_14580 PF04453 LPS transport system D H2515_14585 PF00639 PPIC-type PPIASE domain H2515_14585 PF09312 SurA N-terminal domain H2515_14590 PF01061 ABC-2 type transporter H2515_14595 PF01722 BolA-like protein H2515_14600 PF00462 Glutaredoxin H2515_14605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H2515_14610 PF01634 ATP phosphoribosyltransferase H2515_14615 PF00815 Histidinol dehydrogenase H2515_14620 PF00155 Aminotransferase class I and II H2515_14625 PF00475 Imidazoleglycerol-phosphate dehydratase H2515_14630 PF00117 Glutamine amidotransferase class-I H2515_14635 PF00977 Histidine biosynthesis protein H2515_14640 PF00977 Histidine biosynthesis protein H2515_14645 PF01502 Phosphoribosyl-AMP cyclohydrolase H2515_14645 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase H2515_14650 PF02416 mttA/Hcf106 family H2515_14655 PF02416 mttA/Hcf106 family H2515_14660 PF00902 Sec-independent protein translocase protein (TatC) H2515_14665 PF13439 Glycosyltransferase Family 4 H2515_14665 PF00534 Glycosyl transferases group 1 H2515_14675 PF00313 'Cold-shock' DNA-binding domain H2515_14685 PF03707 Bacterial signalling protein N terminal repeat H2515_14685 PF00990 Diguanylate cyclase, GGDEF domain H2515_14685 PF00563 EAL domain H2515_14690 PF02705 K+ potassium transporter H2515_14705 PF01979 Amidohydrolase family H2515_14710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H2515_14710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H2515_14715 PF00156 Phosphoribosyl transferase domain H2515_14720 PF03652 Holliday junction resolvase H2515_14725 PF02622 Uncharacterized ACR, COG1678 H2515_14730 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H2515_14730 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H2515_14740 PF00285 Citrate synthase, C-terminal domain H2515_14745 PF01521 Iron-sulphur cluster biosynthesis H2515_14750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H2515_14750 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2515_14755 PF02780 Transketolase, C-terminal domain H2515_14755 PF02779 Transketolase, pyrimidine binding domain H2515_14755 PF00364 Biotin-requiring enzyme H2515_14760 PF00676 Dehydrogenase E1 component H2515_14775 PF02774 Semialdehyde dehydrogenase, dimerisation domain H2515_14775 PF01118 Semialdehyde dehydrogenase, NAD binding domain H2515_14780 PF00380 Ribosomal protein S9/S16 H2515_14785 PF00572 Ribosomal protein L13 H2515_14795 PF00881 Nitroreductase family H2515_14830 PF00579 tRNA synthetases class I (W and Y) H2515_14835 PF00689 Cation transporting ATPase, C-terminus H2515_14835 PF00690 Cation transporter/ATPase, N-terminus H2515_14840 PF02261 Aspartate decarboxylase H2515_14850 PF01926 50S ribosome-binding GTPase H2515_14855 PF02254 TrkA-N domain H2515_14855 PF07885 Ion channel H2515_14860 PF01367 5'-3' exonuclease, C-terminal SAM fold H2515_14860 PF01612 3'-5' exonuclease H2515_14860 PF00476 DNA polymerase family A H2515_14860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H2515_14865 PF03641 Possible lysine decarboxylase H2515_14875 PF01636 Phosphotransferase enzyme family H2515_14885 PF00580 UvrD/REP helicase N-terminal domain H2515_14885 PF13361 UvrD-like helicase C-terminal domain H2515_14890 PF01556 DnaJ C terminal domain H2515_14890 PF00226 DnaJ domain H2515_14900 PF00156 Phosphoribosyl transferase domain H2515_14900 PF05139 Erythromycin esterase H2515_14910 PF00561 alpha/beta hydrolase fold H2515_14930 PF03358 NADPH-dependent FMN reductase H2515_14940 PF00893 Small Multidrug Resistance protein H2515_14950 PF03466 LysR substrate binding domain H2515_14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2515_14955 PF00654 Voltage gated chloride channel H2515_14960 PF00654 Voltage gated chloride channel H2515_14970 PF07690 Major Facilitator Superfamily H2515_14985 PF00282 Pyridoxal-dependent decarboxylase conserved domain H2515_14990 PF13520 Amino acid permease H2515_15060 PF13091 PLD-like domain H2515_15060 PF13396 Phospholipase_D-nuclease N-terminal H2515_15065 PF03707 Bacterial signalling protein N terminal repeat H2515_15065 PF00563 EAL domain H2515_15065 PF00990 Diguanylate cyclase, GGDEF domain H2515_15070 PF06745 KaiC H2515_15090 PF00230 Major intrinsic protein H2515_15105 PF01255 Putative undecaprenyl diphosphate synthase H2515_15190 PF00654 Voltage gated chloride channel H2515_15200 PF15978 Tn7-like transposition protein D H2515_15200 PF06527 TniQ H2515_15205 PF11426 Tn7 transposition regulator TnsC H2515_15205 PF13401 AAA domain H2515_15230 PF00873 AcrB/AcrD/AcrF family H2515_15235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2515_15250 PF02705 K+ potassium transporter H2515_15255 PF14490 Helix-hairpin-helix containing domain H2515_15255 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain H2515_15255 PF13538 UvrD-like helicase C-terminal domain H2515_15270 PF00717 Peptidase S24-like H2515_15275 PF00817 impB/mucB/samB family H2515_15275 PF11798 IMS family HHH motif H2515_15275 PF13438 Domain of unknown function (DUF4113) H2515_15275 PF11799 impB/mucB/samB family C-terminal domain H2515_15295 PF00719 Inorganic pyrophosphatase H2515_15310 PF00361 Proton-conducting membrane transporter H2515_15315 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit H2515_15320 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit H2515_15320 PF00374 Nickel-dependent hydrogenase H2515_15320 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit H2515_15325 PF00361 Proton-conducting membrane transporter H2515_15335 PF00146 NADH dehydrogenase H2515_15365 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H2515_15380 PF03952 Enolase, N-terminal domain H2515_15380 PF00113 Enolase, C-terminal TIM barrel domain H2515_15385 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) H2515_15385 PF11867 Domain of unknown function (DUF3387) H2515_15385 PF18766 SWI2/SNF2 ATPase H2515_15400 PF13401 AAA domain H2515_15400 PF11426 Tn7 transposition regulator TnsC H2515_15405 PF00665 Integrase core domain H2515_15410 PF08721 TnsA endonuclease C terminal H2515_15410 PF08722 TnsA endonuclease N terminal H2515_15415 PF01380 SIS domain H2515_15420 PF14602 Hexapeptide repeat of succinyl-transferase H2515_15420 PF12804 MobA-like NTP transferase domain H2515_15420 PF00132 Bacterial transferase hexapeptide (six repeats) H2515_15425 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain H2515_15425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H2515_15430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H2515_15430 PF02874 ATP synthase alpha/beta family, beta-barrel domain H2515_15435 PF00231 ATP synthase H2515_15440 PF02874 ATP synthase alpha/beta family, beta-barrel domain H2515_15440 PF00306 ATP synthase alpha/beta chain, C terminal domain H2515_15440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H2515_15445 PF00213 ATP synthase delta (OSCP) subunit H2515_15450 PF00430 ATP synthase B/B' CF(0) H2515_15455 PF00137 ATP synthase subunit C H2515_15460 PF00119 ATP synthase A chain H2515_15470 PF17762 HTH domain found in ParB protein H2515_15470 PF02195 ParB-like nuclease domain H2515_15475 PF13614 AAA domain H2515_15480 PF02527 rRNA small subunit methyltransferase G H2515_15485 PF01134 Glucose inhibited division protein A H2515_15485 PF13932 GidA associated domain H2515_15500 PF00994 Probable molybdopterin binding domain H2515_15530 PF02754 Cysteine-rich domain H2515_15530 PF13183 4Fe-4S dicluster domain H2515_15535 PF01565 FAD binding domain H2515_15540 PF02913 FAD linked oxidases, C-terminal domain H2515_15540 PF01565 FAD binding domain H2515_15555 PF09339 IclR helix-turn-helix domain H2515_15555 PF01614 Bacterial transcriptional regulator H2515_15570 PF13439 Glycosyltransferase Family 4 H2515_15570 PF00534 Glycosyl transferases group 1 H2515_15610 PF00535 Glycosyl transferase family 2 H2515_15625 PF00005 ABC transporter H2515_15630 PF01061 ABC-2 type transporter H2515_15650 PF16363 GDP-mannose 4,6 dehydratase H2515_15655 PF04321 RmlD substrate binding domain H2515_15660 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase H2515_15665 PF00483 Nucleotidyl transferase H2515_15670 PF00083 Sugar (and other) transporter H2515_15680 PF00490 Delta-aminolevulinic acid dehydratase H2515_15690 PF03900 Porphobilinogen deaminase, C-terminal domain H2515_15690 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H2515_15700 PF01230 HIT domain H2515_15705 PF00202 Aminotransferase class-III H2515_15710 PF02581 Thiamine monophosphate synthase H2515_15715 PF08543 Phosphomethylpyrimidine kinase H2515_15735 PF02167 Cytochrome C1 family H2515_15740 PF00033 Cytochrome b/b6/petB H2515_15740 PF00032 Cytochrome b(C-terminal)/b6/petD H2515_15745 PF00355 Rieske [2Fe-2S] domain H2515_15745 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal H2515_15755 PF00034 Cytochrome c H2515_15765 PF02036 SCP-2 sterol transfer family H2515_15770 PF01136 Peptidase family U32 H2515_15775 PF01136 Peptidase family U32 H2515_15795 PF03477 ATP cone domain H2515_15795 PF13597 Anaerobic ribonucleoside-triphosphate reductase