AFE_0001	PF00712	DNA polymerase III beta subunit, N-terminal domain
AFE_0001	PF02767	DNA polymerase III beta subunit, central domain
AFE_0001	PF02768	DNA polymerase III beta subunit, C-terminal domain
AFE_0002	PF02463	RecF/RecN/SMC N terminal domain
AFE_0003	PF00204	DNA gyrase B
AFE_0003	PF00986	DNA gyrase B subunit, carboxyl terminus
AFE_0003	PF01751	Toprim domain
AFE_0003	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_0004	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_0005	PF05229	AFE_0005
AFE_0006	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AFE_0007	PF00577	Outer membrane usher protein
AFE_0007	PF13953	PapC C-terminal domain
AFE_0008	PF05229	AFE_0008
AFE_0010	PF10387	Protein of unknown function (DUF2442)
AFE_0011	PF03776	Septum formation topological specificity factor MinE
AFE_0012	PF13614	AAA domain
AFE_0013	PF03775	Septum formation inhibitor MinC, C-terminal domain
AFE_0013	PF05209	Septum formation inhibitor MinC, N-terminal domain
AFE_0014	PF00037	4Fe-4S binding domain
AFE_0014	PF11953	Domain of unknown function (DUF3470)
AFE_0015	PF01131	DNA topoisomerase
AFE_0015	PF01396	AFE_0015
AFE_0015	PF01751	Toprim domain
AFE_0016	PF04361	AFE_0016
AFE_0017	PF02481	DNA recombination-mediator protein A
AFE_0018	PF01476	LysM domain
AFE_0019	PF01327	Polypeptide deformylase
AFE_0020	PF00551	Formyl transferase
AFE_0020	PF02911	Formyl transferase, C-terminal domain
AFE_0021	PF01029	NusB family
AFE_0021	PF01189	NOL1/NOP2/sun family
AFE_0022	PF14334	AFE_0022
AFE_0023	PF00512	His Kinase A (phospho-acceptor) domain
AFE_0023	PF00672	HAMP domain
AFE_0023	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_0024	PF00072	Response regulator receiver domain
AFE_0024	PF00158	Sigma-54 interaction domain
AFE_0024	PF02954	Bacterial regulatory protein, Fis family
AFE_0026	PF00512	His Kinase A (phospho-acceptor) domain
AFE_0026	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_0027	PF00072	Response regulator receiver domain
AFE_0027	PF00158	Sigma-54 interaction domain
AFE_0027	PF02954	Bacterial regulatory protein, Fis family
AFE_0029	PF01011	PQQ enzyme repeat
AFE_0029	PF13360	PQQ-like domain
AFE_0031	PF01926	50S ribosome-binding GTPase
AFE_0031	PF10396	GTP-binding protein TrmE N-terminus
AFE_0031	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
AFE_0032	PF02096	60Kd inner membrane protein
AFE_0032	PF14849	YidC periplasmic domain
AFE_0033	PF01809	AFE_0033
AFE_0034	PF00825	Ribonuclease P
AFE_0035	PF00468	Ribosomal protein L34
AFE_0036	PF00005	ABC transporter
AFE_0036	PF12848	ABC transporter
AFE_0037	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_0037	PF03466	LysR substrate binding domain
AFE_0038	PF13437	HlyD family secretion protein
AFE_0039	PF02321	Outer membrane efflux protein
AFE_0040	PF07690	Major Facilitator Superfamily
AFE_0041	PF03595	Voltage-dependent anion channel
AFE_0043	PF13531	Bacterial extracellular solute-binding protein
AFE_0044	PF04173	AFE_0044
AFE_0044	PF07680	AFE_0044
AFE_0045	PF00581	Rhodanese-like domain
AFE_0046	PF00581	Rhodanese-like domain
AFE_0047	PF08534	Redoxin
AFE_0048	PF04173	AFE_0048
AFE_0048	PF07680	AFE_0048
AFE_0049	PF13531	Bacterial extracellular solute-binding protein
AFE_0053	PF04143	AFE_0053
AFE_0054	PF01914	AFE_0054
AFE_0055	PF09723	AFE_0055
AFE_0056	PF00152	tRNA synthetases class II (D, K and N)
AFE_0056	PF01336	OB-fold nucleic acid binding domain
AFE_0056	PF02938	GAD domain
AFE_0057	PF02445	Quinolinate synthetase A protein
AFE_0058	PF01553	Acyltransferase
AFE_0059	PF01709	Transcriptional regulator
AFE_0060	PF02075	Crossover junction endodeoxyribonuclease RuvC
AFE_0061	PF01330	RuvA N terminal domain
AFE_0061	PF07499	RuvA, C-terminal domain
AFE_0061	PF14520	Helix-hairpin-helix domain
AFE_0062	PF05491	Holliday junction DNA helicase ruvB C-terminus
AFE_0062	PF05496	Holliday junction DNA helicase ruvB N-terminus
AFE_0063	PF03061	Thioesterase superfamily
AFE_0064	PF01618	AFE_0064
AFE_0065	PF02472	Biopolymer transport protein ExbD/TolR
AFE_0066	PF13103	TonB C terminal
AFE_0067	PF04052	TolB amino-terminal domain
AFE_0067	PF07676	WD40-like Beta Propeller Repeat
AFE_0068	PF06508	Queuosine biosynthesis protein QueC
AFE_0069	PF04055	Radical SAM superfamily
AFE_0069	PF13394	4Fe-4S single cluster domain
AFE_0070	PF13174	Tetratricopeptide repeat
AFE_0070	PF13432	Tetratricopeptide repeat
AFE_0071	PF00691	OmpA family
AFE_0073	PF02397	AFE_0073
AFE_0073	PF13727	CoA-binding domain
AFE_0074	PF02706	Chain length determinant protein
AFE_0075	PF13412	Winged helix-turn-helix DNA-binding
AFE_0076	PF13440	AFE_0076
AFE_0076	PF14667	Polysaccharide biosynthesis C-terminal domain
AFE_0077	PF13489	Methyltransferase domain
AFE_0078	PF00535	Glycosyl transferase family 2
AFE_0079	PF00534	Glycosyl transferases group 1
AFE_0079	PF13579	Glycosyl transferase 4-like domain
AFE_0081	PF00534	Glycosyl transferases group 1
AFE_0081	PF13439	Glycosyltransferase Family 4
AFE_0082	PF13641	Glycosyltransferase like family 2
AFE_0085	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AFE_0086	PF01850	PIN domain
AFE_0088	PF05015	Plasmid maintenance system killer protein
AFE_0089	PF01381	Helix-turn-helix
AFE_0092	PF02661	Fic/DOC family
AFE_0092	PF13784	Fic/DOC family N-terminal
AFE_0094	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AFE_0095	PF08369	Proto-chlorophyllide reductase 57 kD subunit
AFE_0098	PF07681	AFE_0098
AFE_0098	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_0099	PF00857	Isochorismatase family
AFE_0100	PF13533	Biotin-lipoyl like
AFE_0101	PF00005	ABC transporter
AFE_0102	PF02687	AFE_0102
AFE_0102	PF12704	MacB-like periplasmic core domain
AFE_0105	PF01566	AFE_0105
AFE_0106	PF00512	His Kinase A (phospho-acceptor) domain
AFE_0106	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_0107	PF00072	Response regulator receiver domain
AFE_0107	PF00486	Transcriptional regulatory protein, C terminal
AFE_0108	PF02321	Outer membrane efflux protein
AFE_0109	PF16576	AFE_0109
AFE_0112	PF06041	Bacterial protein of unknown function (DUF924)
AFE_0114	PF07859	alpha/beta hydrolase fold
AFE_0115	PF03724	META domain
AFE_0115	PF04170	NlpE N-terminal domain
AFE_0115	PF09619	Type III secretion system lipoprotein chaperone (YscW)
AFE_0115	PF17185	AFE_0115
AFE_0117	PF08238	Sel1 repeat
AFE_0119	PF00027	Cyclic nucleotide-binding domain
AFE_0119	PF13545	Crp-like helix-turn-helix domain
AFE_0120	PF11127	Protein of unknown function (DUF2892)
AFE_0122	PF04305	AFE_0122
AFE_0123	PF00814	Glycoprotease family
AFE_0124	PF13432	Tetratricopeptide repeat
AFE_0125	PF02660	AFE_0125
AFE_0126	PF02152	Dihydroneopterin aldolase
AFE_0127	PF00919	Uncharacterized protein family UPF0004
AFE_0127	PF01938	TRAM domain
AFE_0127	PF04055	Radical SAM superfamily
AFE_0128	PF01106	NifU-like domain
AFE_0129	PF13561	Enoyl-(Acyl carrier protein) reductase
AFE_0130	PF02636	Putative S-adenosyl-L-methionine-dependent methyltransferase
AFE_0131	PF09678	AFE_0131
AFE_0134	PF04055	Radical SAM superfamily
AFE_0134	PF06969	HemN C-terminal domain
AFE_0135	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_0135	PF03466	LysR substrate binding domain
AFE_0137	PF03573	outer membrane porin, OprD family
AFE_0138	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AFE_0139	PF02582	AFE_0139
AFE_0140	PF01565	FAD binding domain
AFE_0140	PF02913	FAD linked oxidases, C-terminal domain
AFE_0141	PF01467	Cytidylyltransferase
AFE_0141	PF13580	SIS domain
AFE_0142	PF02021	Uncharacterised protein family UPF0102
AFE_0143	PF04348	LppC putative lipoprotein
AFE_0144	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AFE_0150	PF01564	Spermine/spermidine synthase
AFE_0151	PF00581	Rhodanese-like domain
AFE_0152	PF04241	AFE_0152
AFE_0153	PF01988	AFE_0153
AFE_0154	PF00230	Major intrinsic protein
AFE_0155	PF00300	Histidine phosphatase superfamily (branch 1)
AFE_0156	PF01564	Spermine/spermidine synthase
AFE_0156	PF17284	AFE_0156
AFE_0157	PF02675	S-adenosylmethionine decarboxylase
AFE_0158	PF00005	ABC transporter
AFE_0159	PF02405	AFE_0159
AFE_0160	PF02470	AFE_0160
AFE_0161	PF05494	Toluene tolerance, Ttg2
AFE_0162	PF13466	STAS domain
AFE_0163	PF00005	ABC transporter
AFE_0164	PF01479	S4 domain
AFE_0165	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AFE_0166	PF14279	AFE_0166
AFE_0167	PF00398	Ribosomal RNA adenine dimethylase
AFE_0168	PF05036	Sporulation related domain
AFE_0170	PF00750	tRNA synthetases class I (R)
AFE_0170	PF03485	Arginyl tRNA synthetase N terminal domain
AFE_0170	PF05746	DALR anticodon binding domain
AFE_0171	PF07690	Major Facilitator Superfamily
AFE_0172	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_0172	PF03466	LysR substrate binding domain
AFE_0173	PF05175	Methyltransferase small domain
AFE_0174	PF03372	Endonuclease/Exonuclease/phosphatase family
AFE_0175	PF10084	AFE_0175
AFE_0176	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
AFE_0177	PF00043	Glutathione S-transferase, C-terminal domain
AFE_0177	PF13417	Glutathione S-transferase, N-terminal domain
AFE_0178	PF03372	Endonuclease/Exonuclease/phosphatase family
AFE_0179	PF00762	Ferrochelatase
AFE_0180	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AFE_0181	PF03702	Uncharacterised protein family (UPF0075)
AFE_0182	PF01488	Shikimate / quinate 5-dehydrogenase
AFE_0182	PF08501	Shikimate dehydrogenase substrate binding domain
AFE_0183	PF00437	Type II/IV secretion system protein
AFE_0183	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AFE_0184	PF00512	His Kinase A (phospho-acceptor) domain
AFE_0184	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_0185	PF00072	Response regulator receiver domain
AFE_0185	PF00158	Sigma-54 interaction domain
AFE_0185	PF02954	Bacterial regulatory protein, Fis family
AFE_0186	PF01478	Type IV leader peptidase family
AFE_0186	PF06750	AFE_0186
AFE_0187	PF01121	Dephospho-CoA kinase
AFE_0188	PF07072	Protein of unknown function (DUF1342)
AFE_0189	PF00316	Fructose-1-6-bisphosphatase
AFE_0190	PF04386	Stringent starvation protein B
AFE_0191	PF02954	Bacterial regulatory protein, Fis family
AFE_0192	PF01464	Transglycosylase SLT domain
AFE_0192	PF13511	AFE_0192
AFE_0193	PF11906	AFE_0193
AFE_0193	PF13717	AFE_0193
AFE_0194	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
AFE_0195	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AFE_0195	PF02785	Biotin carboxylase C-terminal domain
AFE_0195	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AFE_0196	PF00364	Biotin-requiring enzyme
AFE_0197	PF01220	Dehydroquinase class II
AFE_0198	PF01638	HxlR-like helix-turn-helix
AFE_0200	PF00091	Tubulin/FtsZ family, GTPase domain
AFE_0200	PF12327	FtsZ family, C-terminal domain
AFE_0201	PF02491	SHS2 domain inserted in FTSA
AFE_0201	PF14450	Cell division protein FtsA
AFE_0202	PF03799	Cell division protein FtsQ
AFE_0202	PF08478	POTRA domain, FtsQ-type
AFE_0203	PF01820	D-ala D-ala ligase N-terminus
AFE_0203	PF07478	D-ala D-ala ligase C-terminus
AFE_0204	PF01565	FAD binding domain
AFE_0204	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AFE_0205	PF01225	Mur ligase family, catalytic domain
AFE_0205	PF02875	Mur ligase family, glutamate ligase domain
AFE_0205	PF08245	Mur ligase middle domain
AFE_0206	PF03033	Glycosyltransferase family 28 N-terminal domain
AFE_0206	PF04101	Glycosyltransferase family 28 C-terminal domain
AFE_0207	PF01098	AFE_0207
AFE_0208	PF02875	Mur ligase family, glutamate ligase domain
AFE_0208	PF08245	Mur ligase middle domain
AFE_0209	PF00953	Glycosyl transferase family 4
AFE_0209	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
AFE_0210	PF01225	Mur ligase family, catalytic domain
AFE_0210	PF02875	Mur ligase family, glutamate ligase domain
AFE_0210	PF08245	Mur ligase middle domain
AFE_0211	PF02875	Mur ligase family, glutamate ligase domain
AFE_0211	PF08245	Mur ligase middle domain
AFE_0212	PF00905	Penicillin binding protein transpeptidase domain
AFE_0212	PF03717	Penicillin-binding Protein dimerisation domain
AFE_0213	PF04999	AFE_0213
AFE_0214	PF01795	MraW methylase family
AFE_0215	PF02381	MraZ protein
AFE_0218	PF01743	Poly A polymerase head domain
AFE_0218	PF01966	HD domain
AFE_0218	PF12627	Probable RNA and SrmB- binding site of polymerase A
AFE_0220	PF00501	AMP-binding enzyme
AFE_0221	PF13410	Glutathione S-transferase, C-terminal domain
AFE_0221	PF13417	Glutathione S-transferase, N-terminal domain
AFE_0223	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
AFE_0225	PF01043	SecA preprotein cross-linking domain
AFE_0225	PF02810	SEC-C motif
AFE_0225	PF07516	SecA Wing and Scaffold domain
AFE_0225	PF07517	SecA DEAD-like domain
AFE_0226	PF01960	ArgJ family
AFE_0227	PF00293	NUDIX domain
AFE_0227	PF02581	Thiamine monophosphate synthase/TENI
AFE_0228	PF00535	Glycosyl transferase family 2
AFE_0229	PF01522	Polysaccharide deacetylase
AFE_0230	PF13439	Glycosyltransferase Family 4
AFE_0230	PF13692	Glycosyl transferases group 1
AFE_0232	PF04932	AFE_0232
AFE_0233	PF00535	Glycosyl transferase family 2
AFE_0234	PF00535	Glycosyl transferase family 2
AFE_0235	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AFE_0236	PF13350	Tyrosine phosphatase family
AFE_0237	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AFE_0238	PF03279	AFE_0238
AFE_0239	PF00155	Aminotransferase class I and II
AFE_0240	PF03781	Sulfatase-modifying factor enzyme 1
AFE_0240	PF12867	DinB superfamily
AFE_0240	PF13847	Methyltransferase domain
AFE_0241	PF00588	SpoU rRNA Methylase family
AFE_0243	PF00155	Aminotransferase class I and II
AFE_0244	PF12697	Alpha/beta hydrolase family
AFE_0245	PF08241	Methyltransferase domain
AFE_0246	PF13500	AAA domain
AFE_0247	PF01435	Peptidase family M48
AFE_0248	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
AFE_0249	PF04376	AFE_0249
AFE_0249	PF04377	AFE_0249
AFE_0250	PF03649	AFE_0250
AFE_0251	PF00929	Exonuclease
AFE_0252	PF00111	2Fe-2S iron-sulfur cluster binding domain
AFE_0252	PF00175	Oxidoreductase NAD-binding domain
AFE_0252	PF00970	Oxidoreductase FAD-binding domain
AFE_0255	PF00440	Bacterial regulatory proteins, tetR family
AFE_0256	PF00696	Amino acid kinase family
AFE_0257	PF16576	AFE_0257
AFE_0258	PF09411	Lipid A 3-O-deacylase (PagL)
AFE_0259	PF04055	Radical SAM superfamily
AFE_0259	PF06968	Biotin and Thiamin Synthesis associated domain
AFE_0260	PF02594	Uncharacterised ACR, YggU family COG1872
AFE_0261	PF02325	AFE_0261
AFE_0262	PF03807	NADP oxidoreductase coenzyme F420-dependent
AFE_0262	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AFE_0263	PF01168	Alanine racemase, N-terminal domain
AFE_0264	PF00437	Type II/IV secretion system protein
AFE_0265	PF00437	Type II/IV secretion system protein
AFE_0266	PF00535	Glycosyl transferase family 2
AFE_0267	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_0269	PF00753	Metallo-beta-lactamase superfamily
AFE_0270	PF00027	Cyclic nucleotide-binding domain
AFE_0270	PF13545	Crp-like helix-turn-helix domain
AFE_0271	PF02390	Putative methyltransferase
AFE_0272	PF00731	AIR carboxylase
AFE_0273	PF02222	ATP-grasp domain
AFE_0274	PF02600	Disulfide bond formation protein DsbB
AFE_0275	PF13098	Thioredoxin-like domain
AFE_0276	PF13231	AFE_0276
AFE_0277	PF01668	SmpB protein
AFE_0278	PF13091	PLD-like domain
AFE_0279	PF04355	SmpA / OmlA family
AFE_0280	PF03364	Polyketide cyclase / dehydrase and lipid transport
AFE_0281	PF00696	Amino acid kinase family
AFE_0281	PF01472	PUA domain
AFE_0282	PF01475	Ferric uptake regulator family
AFE_0283	PF01018	GTP1/OBG
AFE_0283	PF01926	50S ribosome-binding GTPase
AFE_0284	PF01016	Ribosomal L27 protein
AFE_0285	PF00829	Ribosomal prokaryotic L21 protein
AFE_0286	PF00916	AFE_0286
AFE_0287	PF00484	Carbonic anhydrase
AFE_0288	PF01717	Cobalamin-independent synthase, Catalytic domain
AFE_0288	PF08267	Cobalamin-independent synthase, N-terminal domain
AFE_0289	PF01209	ubiE/COQ5 methyltransferase family
AFE_0291	PF13410	Glutathione S-transferase, C-terminal domain
AFE_0291	PF13417	Glutathione S-transferase, N-terminal domain
AFE_0292	PF07021	Methionine biosynthesis protein MetW
AFE_0293	PF00561	alpha/beta hydrolase fold
AFE_0295	PF00464	Serine hydroxymethyltransferase
AFE_0296	PF03477	ATP cone domain
AFE_0297	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AFE_0297	PF01872	RibD C-terminal domain
AFE_0298	PF00677	Lumazine binding domain
AFE_0299	PF00925	GTP cyclohydrolase II
AFE_0299	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AFE_0300	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AFE_0301	PF01029	NusB family
AFE_0302	PF11154	AFE_0302
AFE_0303	PF08238	Sel1 repeat
AFE_0304	PF06305	AFE_0304
AFE_0305	PF03109	AFE_0305
AFE_0306	PF00691	OmpA family
AFE_0311	PF00009	Elongation factor Tu GTP binding domain
AFE_0311	PF03143	Elongation factor Tu C-terminal domain
AFE_0311	PF03144	Elongation factor Tu domain 2
AFE_0313	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AFE_0314	PF00467	KOW motif
AFE_0314	PF02357	Transcription termination factor nusG
AFE_0315	PF00298	Ribosomal protein L11, RNA binding domain
AFE_0315	PF03946	Ribosomal protein L11, N-terminal domain
AFE_0316	PF00687	Ribosomal protein L1p/L10e family
AFE_0317	PF00466	Ribosomal protein L10
AFE_0318	PF00542	Ribosomal protein L7/L12 C-terminal domain
AFE_0318	PF16320	AFE_0318
AFE_0320	PF00562	RNA polymerase Rpb2, domain 6
AFE_0320	PF04560	RNA polymerase Rpb2, domain 7
AFE_0320	PF04561	RNA polymerase Rpb2, domain 2
AFE_0320	PF04563	RNA polymerase beta subunit
AFE_0320	PF04565	RNA polymerase Rpb2, domain 3
AFE_0320	PF10385	RNA polymerase beta subunit external 1 domain
AFE_0321	PF00623	RNA polymerase Rpb1, domain 2
AFE_0321	PF04983	RNA polymerase Rpb1, domain 3
AFE_0321	PF04997	RNA polymerase Rpb1, domain 1
AFE_0321	PF04998	RNA polymerase Rpb1, domain 5
AFE_0321	PF05000	RNA polymerase Rpb1, domain 4
AFE_0322	PF00164	Ribosomal protein S12/S23
AFE_0323	PF00177	Ribosomal protein S7p/S5e
AFE_0324	PF00009	Elongation factor Tu GTP binding domain
AFE_0324	PF00679	Elongation factor G C-terminus
AFE_0324	PF03144	Elongation factor Tu domain 2
AFE_0324	PF03764	Elongation factor G, domain IV
AFE_0324	PF14492	Elongation Factor G, domain II
AFE_0325	PF00009	Elongation factor Tu GTP binding domain
AFE_0325	PF03143	Elongation factor Tu C-terminal domain
AFE_0325	PF03144	Elongation factor Tu domain 2
AFE_0326	PF00338	Ribosomal protein S10p/S20e
AFE_0327	PF00297	Ribosomal protein L3
AFE_0328	PF00573	Ribosomal protein L4/L1 family
AFE_0329	PF00276	Ribosomal protein L23
AFE_0330	PF00181	Ribosomal Proteins L2, RNA binding domain
AFE_0330	PF03947	Ribosomal Proteins L2, C-terminal domain
AFE_0331	PF00203	Ribosomal protein S19
AFE_0332	PF00237	Ribosomal protein L22p/L17e
AFE_0333	PF00189	Ribosomal protein S3, C-terminal domain
AFE_0333	PF07650	KH domain
AFE_0334	PF00252	Ribosomal protein L16p/L10e
AFE_0335	PF00831	Ribosomal L29 protein
AFE_0336	PF00366	Ribosomal protein S17
AFE_0337	PF00238	Ribosomal protein L14p/L23e
AFE_0338	PF00467	KOW motif
AFE_0338	PF17136	AFE_0338
AFE_0339	PF00281	Ribosomal protein L5
AFE_0339	PF00673	ribosomal L5P family C-terminus
AFE_0340	PF00253	Ribosomal protein S14p/S29e
AFE_0341	PF00410	Ribosomal protein S8
AFE_0342	PF00347	Ribosomal protein L6
AFE_0343	PF00861	Ribosomal L18p/L5e family
AFE_0344	PF00333	Ribosomal protein S5, N-terminal domain
AFE_0344	PF03719	Ribosomal protein S5, C-terminal domain
AFE_0345	PF00327	Ribosomal protein L30p/L7e
AFE_0346	PF00828	Ribosomal protein L18e/L15
AFE_0347	PF00344	SecY translocase
AFE_0348	PF00406	Adenylate kinase
AFE_0348	PF05191	Adenylate kinase, active site lid
AFE_0349	PF01176	Translation initiation factor 1A / IF-1
AFE_0350	PF00444	Ribosomal protein L36
AFE_0351	PF00416	Ribosomal protein S13/S18
AFE_0352	PF00411	Ribosomal protein S11
AFE_0353	PF00163	Ribosomal protein S4/S9 N-terminal domain
AFE_0353	PF01479	S4 domain
AFE_0354	PF01000	RNA polymerase Rpb3/RpoA insert domain
AFE_0354	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AFE_0354	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AFE_0355	PF01196	Ribosomal protein L17
AFE_0356	PF00692	dUTPase
AFE_0357	PF02441	Flavoprotein
AFE_0357	PF04127	DNA / pantothenate metabolism flavoprotein
AFE_0358	PF04002	RadC-like JAB domain
AFE_0359	PF01219	Prokaryotic diacylglycerol kinase
AFE_0360	PF01569	PAP2 superfamily
AFE_0362	PF12732	AFE_0362
AFE_0363	PF13686	DsrE/DsrF/DrsH-like family
AFE_0364	PF00156	Phosphoribosyl transferase domain
AFE_0365	PF01048	Phosphorylase superfamily
AFE_0366	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AFE_0366	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_0367	PF00462	Glutaredoxin
AFE_0367	PF08534	Redoxin
AFE_0368	PF12710	haloacid dehalogenase-like hydrolase
AFE_0369	PF00270	DEAD/DEAH box helicase
AFE_0369	PF00271	Helicase conserved C-terminal domain
AFE_0369	PF02559	CarD-like/TRCF domain
AFE_0369	PF03461	TRCF domain
AFE_0370	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AFE_0371	PF02542	YgbB family
AFE_0372	PF01142	tRNA pseudouridine synthase D (TruD)
AFE_0373	PF00376	MerR family regulatory protein
AFE_0373	PF09278	MerR, DNA binding
AFE_0374	PF01713	Smr domain
AFE_0375	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_0377	PF03548	Outer membrane lipoprotein carrier protein LolA
AFE_0378	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AFE_0379	PF05496	Holliday junction DNA helicase ruvB N-terminus
AFE_0379	PF12002	MgsA AAA+ ATPase C terminal
AFE_0379	PF16193	AFE_0379
AFE_0380	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AFE_0380	PF02403	Seryl-tRNA synthetase N-terminal domain
AFE_0381	PF07073	Modulator of Rho-dependent transcription termination (ROF)
AFE_0382	PF03734	L,D-transpeptidase catalytic domain
AFE_0389	PF02576	Uncharacterised BCR, YhbC family COG0779
AFE_0389	PF17384	AFE_0389
AFE_0390	PF00575	S1 RNA binding domain
AFE_0390	PF08529	NusA N-terminal domain
AFE_0390	PF13184	NusA-like KH domain
AFE_0390	PF14520	Helix-hairpin-helix domain
AFE_0391	PF00009	Elongation factor Tu GTP binding domain
AFE_0391	PF04760	Translation initiation factor IF-2, N-terminal region
AFE_0391	PF08364	AFE_0391
AFE_0391	PF11987	Translation-initiation factor 2
AFE_0392	PF02033	Ribosome-binding factor A
AFE_0393	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AFE_0393	PF09157	Pseudouridine synthase II TruB, C-terminal
AFE_0393	PF16198	AFE_0393
AFE_0394	PF00312	Ribosomal protein S15
AFE_0395	PF00013	KH domain
AFE_0395	PF00575	S1 RNA binding domain
AFE_0395	PF01138	3' exoribonuclease family, domain 1
AFE_0395	PF03725	3' exoribonuclease family, domain 2
AFE_0395	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AFE_0396	PF00675	Insulinase (Peptidase family M16)
AFE_0396	PF05193	Peptidase M16 inactive domain
AFE_0397	PF00753	Metallo-beta-lactamase superfamily
AFE_0397	PF16123	AFE_0397
AFE_0398	PF08241	Methyltransferase domain
AFE_0399	PF00075	RNase H
AFE_0400	PF00929	Exonuclease
AFE_0401	PF03259	Roadblock/LC7 domain
AFE_0402	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AFE_0403	PF06865	Protein of unknown function (DUF1255)
AFE_0404	PF00764	Arginosuccinate synthase
AFE_0405	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AFE_0405	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AFE_0406	PF00202	Aminotransferase class-III
AFE_0407	PF00696	Amino acid kinase family
AFE_0407	PF01842	ACT domain
AFE_0407	PF13840	ACT domain
AFE_0408	PF11127	Protein of unknown function (DUF2892)
AFE_0409	PF08238	Sel1 repeat
AFE_0412	PF06769	Plasmid encoded toxin Txe
AFE_0413	PF01850	PIN domain
AFE_0414	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AFE_0416	PF07963	Prokaryotic N-terminal methylation motif
AFE_0419	PF00923	Transaldolase
AFE_0420	PF13561	Enoyl-(Acyl carrier protein) reductase
AFE_0421	PF01464	Transglycosylase SLT domain
AFE_0421	PF01476	LysM domain
AFE_0422	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AFE_0423	PF00330	Aconitase family (aconitate hydratase)
AFE_0423	PF00694	Aconitase C-terminal domain
AFE_0424	PF00180	Isocitrate/isopropylmalate dehydrogenase
AFE_0425	PF00549	CoA-ligase
AFE_0425	PF08442	ATP-grasp domain
AFE_0427	PF00549	CoA-ligase
AFE_0427	PF02629	CoA binding domain
AFE_0428	PF00795	Carbon-nitrogen hydrolase
AFE_0428	PF02540	NAD synthase
AFE_0429	PF00543	Nitrogen regulatory protein P-II
AFE_0430	PF13525	Outer membrane lipoprotein
AFE_0431	PF00849	RNA pseudouridylate synthase
AFE_0431	PF01479	S4 domain
AFE_0432	PF02578	Multi-copper polyphenol oxidoreductase laccase
AFE_0433	PF03079	ARD/ARD' family
AFE_0434	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
AFE_0435	PF12710	haloacid dehalogenase-like hydrolase
AFE_0436	PF00596	Class II Aldolase and Adducin N-terminal domain
AFE_0437	PF13740	ACT domain
AFE_0438	PF01327	Polypeptide deformylase
AFE_0439	PF13520	Amino acid permease
AFE_0441	PF16363	AFE_0441
AFE_0442	PF04321	RmlD substrate binding domain
AFE_0444	PF12112	Protein of unknown function (DUF3579)
AFE_0445	PF00483	Nucleotidyl transferase
AFE_0446	PF04367	AFE_0446
AFE_0447	PF00072	Response regulator receiver domain
AFE_0447	PF00158	Sigma-54 interaction domain
AFE_0447	PF02954	Bacterial regulatory protein, Fis family
AFE_0449	PF00512	His Kinase A (phospho-acceptor) domain
AFE_0449	PF00672	HAMP domain
AFE_0449	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_0450	PF02463	RecF/RecN/SMC N terminal domain
AFE_0451	PF01513	ATP-NAD kinase
AFE_0452	PF03309	Type III pantothenate kinase
AFE_0453	PF03099	Biotin/lipoate A/B protein ligase family
AFE_0454	PF00171	Aldehyde dehydrogenase family
AFE_0455	PF07690	Major Facilitator Superfamily
AFE_0457	PF06144	DNA polymerase III, delta subunit
AFE_0457	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
AFE_0458	PF04390	Lipopolysaccharide-assembly
AFE_0459	PF00133	tRNA synthetases class I (I, L, M and V)
AFE_0459	PF08264	Anticodon-binding domain of tRNA
AFE_0459	PF09334	tRNA synthetases class I (M)
AFE_0459	PF13603	Leucyl-tRNA synthetase, Domain 2
AFE_0460	PF03358	NADPH-dependent FMN reductase
AFE_0461	PF04264	YceI-like domain
AFE_0462	PF01427	D-ala-D-ala dipeptidase
AFE_0463	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AFE_0463	PF06827	Zinc finger found in FPG and IleRS
AFE_0463	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AFE_0465	PF01545	Cation efflux family
AFE_0465	PF16916	AFE_0465
AFE_0466	PF00120	Glutamine synthetase, catalytic domain
AFE_0466	PF03951	Glutamine synthetase, beta-Grasp domain
AFE_0467	PF13511	AFE_0467
AFE_0468	PF01975	Survival protein SurE
AFE_0469	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
AFE_0470	PF00140	Sigma-70 factor, region 1
AFE_0470	PF04539	Sigma-70 region 3
AFE_0470	PF04542	Sigma-70 region 2
AFE_0470	PF04545	Sigma-70, region 4
AFE_0471	PF04430	Protein of unknown function (DUF498/DUF598)
AFE_0472	PF00155	Aminotransferase class I and II
AFE_0473	PF00742	Homoserine dehydrogenase
AFE_0473	PF01842	ACT domain
AFE_0473	PF03447	Homoserine dehydrogenase, NAD binding domain
AFE_0474	PF00291	Pyridoxal-phosphate dependent enzyme
AFE_0476	PF02272	DHHA1 domain
AFE_0477	PF04014	Antidote-toxin recognition MazE
AFE_0478	PF01850	PIN domain
AFE_0480	PF00152	tRNA synthetases class II (D, K and N)
AFE_0480	PF01336	OB-fold nucleic acid binding domain
AFE_0481	PF02687	AFE_0481
AFE_0481	PF12704	MacB-like periplasmic core domain
AFE_0482	PF09835	AFE_0482
AFE_0483	PF00005	ABC transporter
AFE_0484	PF03772	AFE_0484
AFE_0485	PF01618	AFE_0485
AFE_0486	PF02472	Biopolymer transport protein ExbD/TolR
AFE_0487	PF04028	AFE_0487
AFE_0488	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AFE_0489	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
AFE_0490	PF03966	Trm112p-like protein
AFE_0491	PF02348	Cytidylyltransferase
AFE_0492	PF00719	Inorganic pyrophosphatase
AFE_0496	PF00132	Bacterial transferase hexapeptide (six repeats)
AFE_0496	PF14602	Hexapeptide repeat of succinyl-transferase
AFE_0498	PF07366	SnoaL-like polyketide cyclase
AFE_0500	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AFE_0501	PF12680	SnoaL-like domain
AFE_0502	PF06983	3-demethylubiquinone-9 3-methyltransferase
AFE_0503	PF13711	AFE_0503
AFE_0506	PF00665	Integrase core domain
AFE_0507	PF00589	Phage integrase family
AFE_0507	PF02899	Phage integrase, N-terminal SAM-like domain
AFE_0508	PF00589	Phage integrase family
AFE_0509	PF00589	Phage integrase family
AFE_0509	PF02899	Phage integrase, N-terminal SAM-like domain
AFE_0513	PF10387	Protein of unknown function (DUF2442)
AFE_0518	PF03167	Uracil DNA glycosylase superfamily
AFE_0519	PF02696	AFE_0519
AFE_0520	PF00004	ATPase family associated with various cellular activities (AAA)
AFE_0520	PF02861	Clp amino terminal domain
AFE_0520	PF07724	AAA domain (Cdc48 subfamily)
AFE_0520	PF10431	C-terminal, D2-small domain, of ClpB protein
AFE_0521	PF02617	ATP-dependent Clp protease adaptor protein ClpS
AFE_0522	PF13616	PPIC-type PPIASE domain
AFE_0523	PF01965	DJ-1/PfpI family
AFE_0524	PF03572	Peptidase family S41
AFE_0524	PF13180	PDZ domain
AFE_0525	PF01551	Peptidase family M23
AFE_0526	PF01676	Metalloenzyme superfamily
AFE_0526	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AFE_0527	PF00343	Carbohydrate phosphorylase
AFE_0528	PF10116	AFE_0528
AFE_0529	PF00581	Rhodanese-like domain
AFE_0530	PF00294	pfkB family carbohydrate kinase
AFE_0531	PF13505	Outer membrane protein beta-barrel domain
AFE_0532	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AFE_0532	PF02772	S-adenosylmethionine synthetase, central domain
AFE_0532	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AFE_0534	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AFE_0534	PF05221	S-adenosyl-L-homocysteine hydrolase
AFE_0535	PF02219	Methylenetetrahydrofolate reductase
AFE_0536	PF00485	Phosphoribulokinase / Uridine kinase family
AFE_0537	PF01569	PAP2 superfamily
AFE_0538	PF05670	AFE_0538
AFE_0538	PF05833	Fibronectin-binding protein A N-terminus (FbpA)
AFE_0539	PF01583	Adenylylsulphate kinase
AFE_0539	PF01747	ATP-sulfurylase
AFE_0539	PF14306	PUA-like domain
AFE_0540	PF00156	Phosphoribosyl transferase domain
AFE_0542	PF00118	TCP-1/cpn60 chaperonin family
AFE_0543	PF00166	Chaperonin 10 Kd subunit
AFE_0544	PF12146	Putative lysophospholipase
AFE_0545	PF02683	AFE_0545
AFE_0545	PF11412	Disulphide bond corrector protein DsbC
AFE_0545	PF13899	Thioredoxin-like
AFE_0546	PF10276	Zinc-finger domain
AFE_0547	PF01063	Aminotransferase class IV
AFE_0548	PF03710	Glutamate-ammonia ligase adenylyltransferase
AFE_0548	PF08335	GlnD PII-uridylyltransferase
AFE_0549	PF13116	AFE_0549
AFE_0549	PF13502	AFE_0549
AFE_0550	PF01548	AFE_0550
AFE_0550	PF02371	AFE_0550
AFE_0551	PF00795	Carbon-nitrogen hydrolase
AFE_0552	PF00005	ABC transporter
AFE_0552	PF06472	AFE_0552
AFE_0553	PF00578	AhpC/TSA family
AFE_0555	PF01252	AFE_0555
AFE_0556	PF00133	tRNA synthetases class I (I, L, M and V)
AFE_0556	PF06827	Zinc finger found in FPG and IleRS
AFE_0556	PF08264	Anticodon-binding domain of tRNA
AFE_0557	PF01687	Riboflavin kinase
AFE_0557	PF06574	FAD synthetase
AFE_0558	PF09969	AFE_0558
AFE_0559	PF03023	AFE_0559
AFE_0562	PF03755	AFE_0562
AFE_0562	PF08340	AFE_0562
AFE_0563	PF00625	Guanylate kinase
AFE_0564	PF01192	RNA polymerase Rpb6
AFE_0565	PF02824	TGS domain
AFE_0565	PF04607	Region found in RelA / SpoT proteins
AFE_0565	PF13291	ACT domain
AFE_0565	PF13328	HD domain
AFE_0566	PF01042	Endoribonuclease L-PSP
AFE_0568	PF00270	DEAD/DEAH box helicase
AFE_0568	PF00271	Helicase conserved C-terminal domain
AFE_0568	PF17191	AFE_0568
AFE_0569	PF03734	L,D-transpeptidase catalytic domain
AFE_0570	PF01593	Flavin containing amine oxidoreductase
AFE_0571	PF01594	AFE_0571
AFE_0572	PF01875	Memo-like protein
AFE_0573	PF01871	AMMECR1
AFE_0574	PF04055	Radical SAM superfamily
AFE_0575	PF02321	Outer membrane efflux protein
AFE_0576	PF00425	chorismate binding enzyme
AFE_0576	PF04715	Anthranilate synthase component I, N terminal region
AFE_0577	PF03706	AFE_0577
AFE_0582	PF10049	AFE_0582
AFE_0583	PF14076	AFE_0583
AFE_0587	PF01699	Sodium/calcium exchanger protein
AFE_0589	PF00270	DEAD/DEAH box helicase
AFE_0589	PF00271	Helicase conserved C-terminal domain
AFE_0589	PF03880	DbpA RNA binding domain
AFE_0590	PF00313	'Cold-shock' DNA-binding domain
AFE_0591	PF00270	DEAD/DEAH box helicase
AFE_0591	PF11331	AFE_0591
AFE_0592	PF01040	UbiA prenyltransferase family
AFE_0593	PF04345	Chorismate lyase
AFE_0594	PF13649	Methyltransferase domain
AFE_0596	PF00919	Uncharacterized protein family UPF0004
AFE_0596	PF01938	TRAM domain
AFE_0596	PF04055	Radical SAM superfamily
AFE_0597	PF02562	PhoH-like protein
AFE_0598	PF02130	Uncharacterized protein family UPF0054
AFE_0599	PF00571	CBS domain
AFE_0599	PF03471	Transporter associated domain
AFE_0600	PF01523	Putative modulator of DNA gyrase
AFE_0601	PF00795	Carbon-nitrogen hydrolase
AFE_0602	PF01297	Periplasmic solute binding protein family
AFE_0603	PF00005	ABC transporter
AFE_0604	PF00950	AFE_0604
AFE_0605	PF00950	AFE_0605
AFE_0609	PF01370	NAD dependent epimerase/dehydratase family
AFE_0614	PF04101	Glycosyltransferase family 28 C-terminal domain
AFE_0615	PF00534	Glycosyl transferases group 1
AFE_0616	PF13439	Glycosyltransferase Family 4
AFE_0616	PF13692	Glycosyl transferases group 1
AFE_0617	PF00005	ABC transporter
AFE_0617	PF00664	ABC transporter transmembrane region
AFE_0618	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AFE_0618	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AFE_0618	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AFE_0621	PF00300	Histidine phosphatase superfamily (branch 1)
AFE_0622	PF13560	Helix-turn-helix domain
AFE_0623	PF08241	Methyltransferase domain
AFE_0624	PF00330	Aconitase family (aconitate hydratase)
AFE_0626	PF00694	Aconitase C-terminal domain
AFE_0628	PF01243	Pyridoxamine 5'-phosphate oxidase
AFE_0628	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AFE_0629	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AFE_0630	PF17124	AFE_0630
AFE_0631	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AFE_0631	PF06481	COX Aromatic Rich Motif
AFE_0632	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AFE_0633	PF00510	Cytochrome c oxidase subunit III
AFE_0635	PF01040	UbiA prenyltransferase family
AFE_0636	PF02673	AFE_0636
AFE_0637	PF07690	Major Facilitator Superfamily
AFE_0638	PF01272	Transcription elongation factor, GreA/GreB, C-term
AFE_0638	PF03449	Transcription elongation factor, N-terminal
AFE_0639	PF02142	MGS-like domain
AFE_0639	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AFE_0639	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AFE_0640	PF00117	Glutamine amidotransferase class-I
AFE_0640	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AFE_0642	PF02597	ThiS family
AFE_0643	PF05690	Thiazole biosynthesis protein ThiG
AFE_0645	PF01225	Mur ligase family, catalytic domain
AFE_0645	PF02875	Mur ligase family, glutamate ligase domain
AFE_0645	PF08245	Mur ligase middle domain
AFE_0646	PF00005	ABC transporter
AFE_0647	PF02441	Flavoprotein
AFE_0648	PF02405	AFE_0648
AFE_0649	PF03372	Endonuclease/Exonuclease/phosphatase family
AFE_0650	PF03168	Late embryogenesis abundant protein
AFE_0652	PF00899	ThiF family
AFE_0653	PF07143	Hydroxyneurosporene synthase (CrtC)
AFE_0653	PF17186	AFE_0653
AFE_0654	PF02687	AFE_0654
AFE_0654	PF12704	MacB-like periplasmic core domain
AFE_0655	PF00005	ABC transporter
AFE_0657	PF00085	Thioredoxin
AFE_0658	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AFE_0658	PF07497	Rho termination factor, RNA-binding domain
AFE_0658	PF07498	Rho termination factor, N-terminal domain
AFE_0659	PF01197	Ribosomal protein L31
AFE_0660	PF00390	Malic enzyme, N-terminal domain
AFE_0660	PF03949	Malic enzyme, NAD binding domain
AFE_0661	PF01594	AFE_0661
AFE_0662	PF00920	Dehydratase family
AFE_0663	PF01936	NYN domain
AFE_0664	PF00583	Acetyltransferase (GNAT) family
AFE_0664	PF00696	Amino acid kinase family
AFE_0665	PF01722	BolA-like protein
AFE_0666	PF03795	YCII-related domain
AFE_0667	PF04279	AFE_0667
AFE_0668	PF05673	Protein of unknown function (DUF815)
AFE_0669	PF00459	Inositol monophosphatase family
AFE_0670	PF00588	SpoU rRNA Methylase family
AFE_0671	PF00132	Bacterial transferase hexapeptide (six repeats)
AFE_0671	PF06426	Serine acetyltransferase, N-terminal
AFE_0672	PF02082	Transcriptional regulator
AFE_0673	PF00266	Aminotransferase class-V
AFE_0674	PF01592	NifU-like N terminal domain
AFE_0675	PF01521	Iron-sulphur cluster biosynthesis
AFE_0676	PF07743	HSCB C-terminal oligomerisation domain
AFE_0677	PF00012	Hsp70 protein
AFE_0678	PF00111	2Fe-2S iron-sulfur cluster binding domain
AFE_0679	PF04384	Iron-sulphur cluster assembly
AFE_0680	PF03054	tRNA methyl transferase
AFE_0681	PF01734	Patatin-like phospholipase
AFE_0683	PF00271	Helicase conserved C-terminal domain
AFE_0683	PF04851	Type III restriction enzyme, res subunit
AFE_0683	PF08463	AFE_0683
AFE_0684	PF02384	N-6 DNA Methylase
AFE_0684	PF12161	HsdM N-terminal domain
AFE_0685	PF02661	Fic/DOC family
AFE_0685	PF13310	AFE_0685
AFE_0686	PF01420	Type I restriction modification DNA specificity domain
AFE_0687	PF13289	AFE_0687
AFE_0689	PF13683	AFE_0689
AFE_0690	PF02634	FdhD/NarQ family
AFE_0692	PF00384	Molybdopterin oxidoreductase
AFE_0692	PF01568	Molydopterin dinucleotide binding domain
AFE_0693	PF00158	Sigma-54 interaction domain
AFE_0693	PF02954	Bacterial regulatory protein, Fis family
AFE_0696	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AFE_0697	PF00107	Zinc-binding dehydrogenase
AFE_0697	PF08240	Alcohol dehydrogenase GroES-like domain
AFE_0698	PF00756	Putative esterase
AFE_0699	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_0699	PF03466	LysR substrate binding domain
AFE_0700	PF00072	Response regulator receiver domain
AFE_0700	PF00158	Sigma-54 interaction domain
AFE_0700	PF02954	Bacterial regulatory protein, Fis family
AFE_0701	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AFE_0701	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
AFE_0702	PF00374	Nickel-dependent hydrogenase
AFE_0705	PF01750	Hydrogenase maturation protease
AFE_0710	PF00355	Rieske [2Fe-2S] domain
AFE_0710	PF01106	NifU-like domain
AFE_0711	PF01436	NHL repeat
AFE_0712	PF00708	Acylphosphatase
AFE_0712	PF01300	Telomere recombination
AFE_0712	PF07503	HypF finger
AFE_0713	PF01455	HupF/HypC family
AFE_0714	PF13580	SIS domain
AFE_0715	PF01924	Hydrogenase formation hypA family
AFE_0716	PF00586	AIR synthase related protein, N-terminal domain
AFE_0716	PF02769	AIR synthase related protein, C-terminal domain
AFE_0717	PF01155	Hydrogenase expression/synthesis hypA family
AFE_0718	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AFE_0719	PF13520	Amino acid permease
AFE_0720	PF01266	FAD dependent oxidoreductase
AFE_0721	PF01152	Bacterial-like globin
AFE_0722	PF00291	Pyridoxal-phosphate dependent enzyme
AFE_0722	PF00585	C-terminal regulatory domain of Threonine dehydratase
AFE_0723	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_0724	PF00561	alpha/beta hydrolase fold
AFE_0725	PF04324	BFD-like [2Fe-2S] binding domain
AFE_0726	PF13444	Acetyltransferase (GNAT) domain
AFE_0727	PF01553	Acyltransferase
AFE_0728	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AFE_0729	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_0729	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AFE_0730	PF00310	Glutamine amidotransferases class-II
AFE_0730	PF01493	GXGXG motif
AFE_0730	PF01645	Conserved region in glutamate synthase
AFE_0730	PF04898	Glutamate synthase central domain
AFE_0731	PF01966	HD domain
AFE_0731	PF13286	Phosphohydrolase-associated domain
AFE_0732	PF02511	Thymidylate synthase complementing protein
AFE_0733	PF01761	3-dehydroquinate synthase
AFE_0734	PF01202	Shikimate kinase
AFE_0735	PF00263	AFE_0735
AFE_0735	PF03958	Bacterial type II/III secretion system short domain
AFE_0736	PF04351	Pilus assembly protein, PilP
AFE_0737	PF04350	Pilus assembly protein, PilO
AFE_0738	PF05137	AFE_0738
AFE_0739	PF11104	Type IV pilus assembly protein PilM;
AFE_0741	PF14437	AFE_0741
AFE_0742	PF01894	Uncharacterised protein family UPF0047
AFE_0744	PF00488	MutS domain V
AFE_0745	PF00205	Thiamine pyrophosphate enzyme, central domain
AFE_0745	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AFE_0745	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AFE_0746	PF10369	Small subunit of acetolactate synthase
AFE_0746	PF13710	ACT domain
AFE_0747	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AFE_0747	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
AFE_0748	PF02666	AFE_0748
AFE_0749	PF00224	Pyruvate kinase, barrel domain
AFE_0750	PF01066	CDP-alcohol phosphatidyltransferase
AFE_0751	PF00582	Universal stress protein family
AFE_0752	PF14489	QueF-like protein
AFE_0753	PF02463	RecF/RecN/SMC N terminal domain
AFE_0755	PF11563	Protoglobin
AFE_0756	PF12710	haloacid dehalogenase-like hydrolase
AFE_0757	PF00533	BRCA1 C Terminus (BRCT) domain
AFE_0757	PF01653	NAD-dependent DNA ligase adenylation domain
AFE_0757	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AFE_0757	PF03120	NAD-dependent DNA ligase OB-fold domain
AFE_0757	PF12826	Helix-hairpin-helix motif
AFE_0757	PF14520	Helix-hairpin-helix domain
AFE_0758	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AFE_0759	PF08241	Methyltransferase domain
AFE_0760	PF01863	Protein of unknown function DUF45
AFE_0761	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_0761	PF03466	LysR substrate binding domain
AFE_0763	PF00593	TonB dependent receptor
AFE_0763	PF07715	TonB-dependent Receptor Plug Domain
AFE_0764	PF01925	AFE_0764
AFE_0768	PF01618	AFE_0768
AFE_0769	PF02472	Biopolymer transport protein ExbD/TolR
AFE_0770	PF03544	Gram-negative bacterial TonB protein C-terminal
AFE_0771	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
AFE_0772	PF01979	Amidohydrolase family
AFE_0773	PF00962	Adenosine/AMP deaminase
AFE_0774	PF06516	AFE_0774
AFE_0775	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AFE_0775	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
AFE_0776	PF00111	2Fe-2S iron-sulfur cluster binding domain
AFE_0776	PF01799	[2Fe-2S] binding domain
AFE_0777	PF00941	FAD binding domain in molybdopterin dehydrogenase
AFE_0777	PF03450	CO dehydrogenase flavoprotein C-terminal domain
AFE_0778	PF04115	Ureidoglycolate hydrolase
AFE_0779	PF09663	Amidohydrolase ring-opening protein (Amido_AtzD_TrzD)
AFE_0780	PF02625	XdhC and CoxI family
AFE_0780	PF13478	XdhC Rossmann domain
AFE_0781	PF13318	AFE_0781
AFE_0782	PF01425	Amidase
AFE_0783	PF11533	Protein of unknown function (DUF3225)
AFE_0784	PF12804	MobA-like NTP transferase domain
AFE_0785	PF01019	Gamma-glutamyltranspeptidase
AFE_0786	PF01243	Pyridoxamine 5'-phosphate oxidase
AFE_0787	PF01522	Polysaccharide deacetylase
AFE_0788	PF01494	FAD binding domain
AFE_0790	PF01553	Acyltransferase
AFE_0791	PF00999	Sodium/hydrogen exchanger family
AFE_0792	PF00535	Glycosyl transferase family 2
AFE_0793	PF00106	short chain dehydrogenase
AFE_0795	PF13723	AFE_0795
AFE_0796	PF00109	Beta-ketoacyl synthase, N-terminal domain
AFE_0796	PF02801	Beta-ketoacyl synthase, C-terminal domain
AFE_0797	PF00550	Phosphopantetheine attachment site
AFE_0798	PF03176	MMPL family
AFE_0800	PF03279	AFE_0800
AFE_0802	PF00501	AMP-binding enzyme
AFE_0802	PF13193	AMP-binding enzyme C-terminal domain
AFE_0805	PF03321	GH3 auxin-responsive promoter
AFE_0806	PF01804	Penicillin amidase
AFE_0808	PF00941	FAD binding domain in molybdopterin dehydrogenase
AFE_0808	PF03450	CO dehydrogenase flavoprotein C-terminal domain
AFE_0809	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AFE_0809	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
AFE_0810	PF00111	2Fe-2S iron-sulfur cluster binding domain
AFE_0810	PF01799	[2Fe-2S] binding domain
AFE_0813	PF07690	Major Facilitator Superfamily
AFE_0814	PF00654	Voltage gated chloride channel
AFE_0815	PF00654	Voltage gated chloride channel
AFE_0817	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_0817	PF03466	LysR substrate binding domain
AFE_0818	PF00122	E1-E2 ATPase
AFE_0818	PF00690	Cation transporter/ATPase, N-terminus
AFE_0818	PF00702	haloacid dehalogenase-like hydrolase
AFE_0821	PF00149	Calcineurin-like phosphoesterase
AFE_0826	PF02384	N-6 DNA Methylase
AFE_0826	PF12161	HsdM N-terminal domain
AFE_0827	PF13271	AFE_0827
AFE_0827	PF13749	ATP-dependent DNA helicase recG C-terminal
AFE_0828	PF13310	AFE_0828
AFE_0829	PF01420	Type I restriction modification DNA specificity domain
AFE_0832	PF00665	Integrase core domain
AFE_0833	PF00589	Phage integrase family
AFE_0833	PF02899	Phage integrase, N-terminal SAM-like domain
AFE_0834	PF00589	Phage integrase family
AFE_0835	PF00589	Phage integrase family
AFE_0835	PF02899	Phage integrase, N-terminal SAM-like domain
AFE_0837	PF13401	AAA domain
AFE_0841	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
AFE_0841	PF04851	Type III restriction enzyme, res subunit
AFE_0842	PF01863	Protein of unknown function DUF45
AFE_0845	PF00271	Helicase conserved C-terminal domain
AFE_0845	PF02151	UvrB/uvrC motif
AFE_0845	PF04851	Type III restriction enzyme, res subunit
AFE_0845	PF12344	Ultra-violet resistance protein B
AFE_0846	PF00107	Zinc-binding dehydrogenase
AFE_0846	PF08240	Alcohol dehydrogenase GroES-like domain
AFE_0847	PF00117	Glutamine amidotransferase class-I
AFE_0847	PF06418	CTP synthase N-terminus
AFE_0848	PF00793	DAHP synthetase I family
AFE_0849	PF00113	Enolase, C-terminal TIM barrel domain
AFE_0849	PF03952	Enolase, N-terminal domain
AFE_0850	PF04977	Septum formation initiator
AFE_0851	PF01132	Elongation factor P (EF-P) OB domain
AFE_0851	PF08207	Elongation factor P (EF-P) KOW-like domain
AFE_0851	PF09285	Elongation factor P, C-terminal
AFE_0852	PF06155	Protein of unknown function (DUF971)
AFE_0853	PF01541	GIY-YIG catalytic domain
AFE_0853	PF02151	UvrB/uvrC motif
AFE_0853	PF08459	UvrC Helix-hairpin-helix N-terminal
AFE_0853	PF12826	Helix-hairpin-helix motif
AFE_0854	PF01066	CDP-alcohol phosphatidyltransferase
AFE_0857	PF00027	Cyclic nucleotide-binding domain
AFE_0857	PF13545	Crp-like helix-turn-helix domain
AFE_0858	PF04343	AFE_0858
AFE_0859	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_0859	PF14721	Apoptosis-inducing factor, mitochondrion-associated, C-term
AFE_0860	PF00111	2Fe-2S iron-sulfur cluster binding domain
AFE_0860	PF00175	Oxidoreductase NAD-binding domain
AFE_0860	PF00970	Oxidoreductase FAD-binding domain
AFE_0861	PF00042	Globin
AFE_0862	PF00529	HlyD family secretion protein
AFE_0862	PF16576	AFE_0862
AFE_0863	PF02321	Outer membrane efflux protein
AFE_0864	PF07690	Major Facilitator Superfamily
AFE_0866	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_0866	PF03466	LysR substrate binding domain
AFE_0869	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AFE_0870	PF06769	Plasmid encoded toxin Txe
AFE_0871	PF00011	Hsp20/alpha crystallin family
AFE_0872	PF00004	ATPase family associated with various cellular activities (AAA)
AFE_0872	PF02190	ATP-dependent protease La (LON) domain
AFE_0872	PF05362	Lon protease (S16) C-terminal proteolytic domain
AFE_0875	PF13673	Acetyltransferase (GNAT) domain
AFE_0878	PF00583	Acetyltransferase (GNAT) family
AFE_0879	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_0879	PF03466	LysR substrate binding domain
AFE_0881	PF12973	ChrR Cupin-like domain
AFE_0882	PF01593	Flavin containing amine oxidoreductase
AFE_0882	PF13450	NAD(P)-binding Rossmann-like domain
AFE_0888	PF01906	Putative heavy-metal-binding
AFE_0889	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AFE_0890	PF05016	Plasmid stabilisation system protein
AFE_0892	PF10672	S-adenosylmethionine-dependent methyltransferase
AFE_0893	PF01008	Initiation factor 2 subunit family
AFE_0894	PF00521	DNA gyrase/topoisomerase IV, subunit A
AFE_0894	PF03989	DNA gyrase C-terminal domain, beta-propeller
AFE_0895	PF00266	Aminotransferase class-V
AFE_0896	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AFE_0896	PF01842	ACT domain
AFE_0896	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AFE_0897	PF00800	Prephenate dehydratase
AFE_0897	PF01817	Chorismate mutase type II
AFE_0897	PF01842	ACT domain
AFE_0898	PF00155	Aminotransferase class I and II
AFE_0899	PF00793	DAHP synthetase I family
AFE_0900	PF02153	Prephenate dehydrogenase
AFE_0901	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AFE_0902	PF02224	Cytidylate kinase
AFE_0903	PF00575	S1 RNA binding domain
AFE_0905	PF00216	Bacterial DNA-binding protein
AFE_0906	PF13174	Tetratricopeptide repeat
AFE_0906	PF13432	Tetratricopeptide repeat
AFE_0907	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AFE_0908	PF00156	Phosphoribosyl transferase domain
AFE_0909	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AFE_0909	PF05697	Bacterial trigger factor protein (TF)
AFE_0909	PF05698	Bacterial trigger factor protein (TF) C-terminus
AFE_0910	PF00574	Clp protease
AFE_0911	PF06689	ClpX C4-type zinc finger
AFE_0911	PF07724	AAA domain (Cdc48 subfamily)
AFE_0911	PF10431	C-terminal, D2-small domain, of ClpB protein
AFE_0912	PF00004	ATPase family associated with various cellular activities (AAA)
AFE_0912	PF02190	ATP-dependent protease La (LON) domain
AFE_0912	PF05362	Lon protease (S16) C-terminal proteolytic domain
AFE_0914	PF00216	Bacterial DNA-binding protein
AFE_0918	PF01569	PAP2 superfamily
AFE_0919	PF14235	AFE_0919
AFE_0920	PF01566	AFE_0920
AFE_0922	PF07690	Major Facilitator Superfamily
AFE_0923	PF04356	Protein of unknown function (DUF489)
AFE_0924	PF01842	ACT domain
AFE_0924	PF01909	Nucleotidyltransferase domain
AFE_0924	PF01966	HD domain
AFE_0924	PF08335	GlnD PII-uridylyltransferase
AFE_0925	PF00557	Metallopeptidase family M24
AFE_0926	PF03749	Sugar fermentation stimulation protein
AFE_0927	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AFE_0928	PF00586	AIR synthase related protein, N-terminal domain
AFE_0928	PF02769	AIR synthase related protein, C-terminal domain
AFE_0929	PF04608	Phosphatidylglycerophosphatase A
AFE_0930	PF02464	Competence-damaged protein
AFE_0932	PF00154	recA bacterial DNA recombination protein
AFE_0933	PF02631	RecX family
AFE_0934	PF01411	tRNA synthetases class II (A)
AFE_0934	PF02272	DHHA1 domain
AFE_0934	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AFE_0936	PF01750	Hydrogenase maturation protease
AFE_0937	PF00374	Nickel-dependent hydrogenase
AFE_0938	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AFE_0939	PF00175	Oxidoreductase NAD-binding domain
AFE_0939	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
AFE_0940	PF17179	AFE_0940
AFE_0941	PF01464	Transglycosylase SLT domain
AFE_0942	PF00176	SNF2 family N-terminal domain
AFE_0942	PF00271	Helicase conserved C-terminal domain
AFE_0943	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AFE_0943	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AFE_0943	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AFE_0943	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AFE_0945	PF00005	ABC transporter
AFE_0945	PF12848	ABC transporter
AFE_0948	PF01964	ThiC family
AFE_0948	PF13667	ThiC-associated domain
AFE_0950	PF00732	GMC oxidoreductase
AFE_0950	PF05199	GMC oxidoreductase
AFE_0951	PF00171	Aldehyde dehydrogenase family
AFE_0954	PF02322	AFE_0954
AFE_0955	PF01654	AFE_0955
AFE_0957	PF00158	Sigma-54 interaction domain
AFE_0958	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AFE_0958	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_0959	PF02230	Phospholipase/Carboxylesterase
AFE_0960	PF04349	Periplasmic glucan biosynthesis protein, MdoG
AFE_0962	PF00535	Glycosyl transferase family 2
AFE_0963	PF13460	NADH(P)-binding
AFE_0964	PF04241	AFE_0964
AFE_0968	PF14341	AFE_0968
AFE_0969	PF07963	Prokaryotic N-terminal methylation motif
AFE_0969	PF16074	AFE_0969
AFE_0970	PF07963	Prokaryotic N-terminal methylation motif
AFE_0971	PF07963	Prokaryotic N-terminal methylation motif
AFE_0971	PF12019	Type II transport protein GspH
AFE_0972	PF00482	Type II secretion system (T2SS), protein F
AFE_0973	PF01343	Peptidase family S49
AFE_0973	PF08496	AFE_0973
AFE_0975	PF02597	ThiS family
AFE_0976	PF02391	MoaE protein
AFE_0977	PF04461	Protein of unknown function (DUF520)
AFE_0978	PF03259	Roadblock/LC7 domain
AFE_0979	PF01571	Aminomethyltransferase folate-binding domain
AFE_0979	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AFE_0980	PF01597	Glycine cleavage H-protein
AFE_0981	PF02347	Glycine cleavage system P-protein
AFE_0982	PF02347	Glycine cleavage system P-protein
AFE_0983	PF00005	ABC transporter
AFE_0983	PF00664	ABC transporter transmembrane region
AFE_0984	PF00037	4Fe-4S binding domain
AFE_0984	PF11953	Domain of unknown function (DUF3470)
AFE_0985	PF00578	AhpC/TSA family
AFE_0985	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AFE_0987	PF02811	PHP domain
AFE_0988	PF01594	AFE_0988
AFE_0991	PF00588	SpoU rRNA Methylase family
AFE_0991	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AFE_0992	PF01026	TatD related DNase
AFE_0993	PF12706	Beta-lactamase superfamily domain
AFE_0995	PF00589	Phage integrase family
AFE_0996	PF12728	Helix-turn-helix domain
AFE_0998	PF00717	Peptidase S24-like
AFE_0998	PF12844	Helix-turn-helix domain
AFE_0999	PF14549	DNA-binding transcriptional regulator Cro
AFE_1000	PF02498	AFE_1000
AFE_1007	PF01464	Transglycosylase SLT domain
AFE_1013	PF01131	DNA topoisomerase
AFE_1013	PF01751	Toprim domain
AFE_1016	PF02600	Disulfide bond formation protein DsbB
AFE_1018	PF13098	Thioredoxin-like domain
AFE_1022	PF01734	Patatin-like phospholipase
AFE_1023	PF01844	HNH endonuclease
AFE_1023	PF14239	AFE_1023
AFE_1024	PF02163	Peptidase family M50
AFE_1028	PF13091	PLD-like domain
AFE_1029	PF04402	Protein of unknown function (DUF541)
AFE_1031	PF01402	Ribbon-helix-helix protein, copG family
AFE_1033	PF00239	Resolvase, N terminal domain
AFE_1034	PF07282	AFE_1034
AFE_1035	PF00856	SET domain
AFE_1042	PF09618	CRISPR-associated protein (Cas_Csy4)
AFE_1047	PF13538	UvrD-like helicase C-terminal domain
AFE_1047	PF13604	AAA domain
AFE_1047	PF14490	Helix-hairpin-helix containing domain
AFE_1047	PF14520	Helix-hairpin-helix domain
AFE_1053	PF01507	Phosphoadenosine phosphosulfate reductase family
AFE_1057	PF13432	Tetratricopeptide repeat
AFE_1057	PF13469	Sulfotransferase family
AFE_1058	PF01385	AFE_1058
AFE_1058	PF07282	AFE_1058
AFE_1058	PF12323	AFE_1058
AFE_1065	PF01464	Transglycosylase SLT domain
AFE_1066	PF13728	F plasmid transfer operon protein
AFE_1067	PF06122	AFE_1067
AFE_1068	PF07916	AFE_1068
AFE_1070	PF00216	Bacterial DNA-binding protein
AFE_1071	PF09722	AFE_1071
AFE_1072	PF08808	AFE_1072
AFE_1073	PF02498	AFE_1073
AFE_1078	PF07178	AFE_1078
AFE_1079	PF05309	AFE_1079
AFE_1080	PF06586	AFE_1080
AFE_1081	PF03743	Bacterial conjugation TrbI-like protein
AFE_1082	PF09676	AFE_1082
AFE_1085	PF13098	Thioredoxin-like domain
AFE_1087	PF00437	Type II/IV secretion system protein
AFE_1089	PF11130	AFE_1089
AFE_1091	PF10502	Signal peptidase, peptidase S26
AFE_1095	PF09673	AFE_1095
AFE_1096	PF06834	AFE_1096
AFE_1097	PF06986	AFE_1097
AFE_1098	PF04014	Antidote-toxin recognition MazE
AFE_1099	PF02452	PemK-like protein
AFE_1105	PF00239	Resolvase, N terminal domain
AFE_1109	PF08378	AFE_1109
AFE_1110	PF01548	AFE_1110
AFE_1110	PF02371	AFE_1110
AFE_1114	PF01435	Peptidase family M48
AFE_1115	PF00149	Calcineurin-like phosphoesterase
AFE_1122	PF13223	AFE_1122
AFE_1127	PF05014	Nucleoside 2-deoxyribosyltransferase
AFE_1130	PF09397	Ftsk gamma domain
AFE_1133	PF00857	Isochorismatase family
AFE_1136	PF09335	AFE_1136
AFE_1137	PF00580	UvrD/REP helicase N-terminal domain
AFE_1137	PF13361	UvrD-like helicase C-terminal domain
AFE_1141	PF13421	AFE_1141
AFE_1142	PF01548	AFE_1142
AFE_1142	PF02371	AFE_1142
AFE_1145	PF00589	Phage integrase family
AFE_1152	PF14279	AFE_1152
AFE_1197	PF14216	AFE_1197
AFE_1199	PF00075	RNase H
AFE_1201	PF08721	TnsA endonuclease C terminal
AFE_1201	PF08722	TnsA endonuclease N terminal
AFE_1202	PF00665	Integrase core domain
AFE_1202	PF09299	Mu transposase, C-terminal
AFE_1203	PF13401	AAA domain
AFE_1204	PF06527	AFE_1204
AFE_1204	PF15978	AFE_1204
AFE_1206	PF03704	Bacterial transcriptional activator domain
AFE_1206	PF13191	AAA ATPase domain
AFE_1208	PF03797	Autotransporter beta-domain
AFE_1208	PF13018	AFE_1208
AFE_1209	PF13018	AFE_1209
AFE_1210	PF13640	2OG-Fe(II) oxygenase superfamily
AFE_1211	PF13374	Tetratricopeptide repeat
AFE_1211	PF13424	Tetratricopeptide repeat
AFE_1211	PF13432	Tetratricopeptide repeat
AFE_1211	PF13469	Sulfotransferase family
AFE_1212	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AFE_1215	PF01385	AFE_1215
AFE_1215	PF07282	AFE_1215
AFE_1215	PF12323	AFE_1215
AFE_1217	PF03167	Uracil DNA glycosylase superfamily
AFE_1218	PF14243	AFE_1218
AFE_1221	PF01555	DNA methylase
AFE_1222	PF13505	Outer membrane protein beta-barrel domain
AFE_1227	PF00149	Calcineurin-like phosphoesterase
AFE_1229	PF00563	EAL domain
AFE_1230	PF00533	BRCA1 C Terminus (BRCT) domain
AFE_1230	PF01653	NAD-dependent DNA ligase adenylation domain
AFE_1230	PF03120	NAD-dependent DNA ligase OB-fold domain
AFE_1233	PF04480	Protein of unknown function (DUF559)
AFE_1234	PF13488	AFE_1234
AFE_1241	PF00216	Bacterial DNA-binding protein
AFE_1251	PF12696	TraM recognition site of TraD and TraG
AFE_1258	PF01131	DNA topoisomerase
AFE_1260	PF00436	Single-strand binding protein family
AFE_1265	PF01548	AFE_1265
AFE_1265	PF02371	AFE_1265
AFE_1266	PF05729	NACHT domain
AFE_1270	PF04404	AFE_1270
AFE_1275	PF11348	AFE_1275
AFE_1283	PF13708	AFE_1283
AFE_1286	PF09588	YqaJ-like viral recombinase domain
AFE_1292	PF06213	AFE_1292
AFE_1295	PF00072	Response regulator receiver domain
AFE_1295	PF02954	Bacterial regulatory protein, Fis family
AFE_1296	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_1296	PF03466	LysR substrate binding domain
AFE_1297	PF07728	AAA domain (dynein-related subfamily)
AFE_1297	PF08406	AFE_1297
AFE_1301	PF01507	Phosphoadenosine phosphosulfate reductase family
AFE_1304	PF00239	Resolvase, N terminal domain
AFE_1304	PF13411	MerR HTH family regulatory protein
AFE_1321	PF01906	Putative heavy-metal-binding
AFE_1326	PF08346	AFE_1326
AFE_1328	PF07282	AFE_1328
AFE_1330	PF00872	AFE_1330
AFE_1336	PF11154	AFE_1336
AFE_1338	PF01569	PAP2 superfamily
AFE_1339	PF02563	Polysaccharide biosynthesis/export protein
AFE_1340	PF02706	Chain length determinant protein
AFE_1340	PF13614	AAA domain
AFE_1340	PF13807	AFE_1340
AFE_1342	PF01370	NAD dependent epimerase/dehydratase family
AFE_1343	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AFE_1343	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AFE_1343	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AFE_1344	PF13440	AFE_1344
AFE_1345	PF13489	Methyltransferase domain
AFE_1346	PF00535	Glycosyl transferase family 2
AFE_1349	PF00534	Glycosyl transferases group 1
AFE_1351	PF00534	Glycosyl transferases group 1
AFE_1351	PF13439	Glycosyltransferase Family 4
AFE_1353	PF00733	Asparagine synthase
AFE_1353	PF13537	Glutamine amidotransferase domain
AFE_1354	PF00534	Glycosyl transferases group 1
AFE_1354	PF13439	Glycosyltransferase Family 4
AFE_1355	PF00534	Glycosyl transferases group 1
AFE_1355	PF13439	Glycosyltransferase Family 4
AFE_1357	PF00534	Glycosyl transferases group 1
AFE_1357	PF13439	Glycosyltransferase Family 4
AFE_1359	PF01909	Nucleotidyltransferase domain
AFE_1360	PF05168	HEPN domain
AFE_1362	PF01850	PIN domain
AFE_1363	PF01909	Nucleotidyltransferase domain
AFE_1364	PF05168	HEPN domain
AFE_1365	PF14239	AFE_1365
AFE_1365	PF14279	AFE_1365
AFE_1366	PF00483	Nucleotidyl transferase
AFE_1366	PF01050	Mannose-6-phosphate isomerase
AFE_1367	PF04255	Protein of unknown function (DUF433)
AFE_1368	PF01927	AFE_1368
AFE_1369	PF01850	PIN domain
AFE_1370	PF02397	AFE_1370
AFE_1370	PF13727	CoA-binding domain
AFE_1371	PF00176	SNF2 family N-terminal domain
AFE_1371	PF00271	Helicase conserved C-terminal domain
AFE_1372	PF02661	Fic/DOC family
AFE_1373	PF01695	IstB-like ATP binding protein
AFE_1373	PF08483	AFE_1373
AFE_1375	PF17342	AFE_1375
AFE_1376	PF13518	Helix-turn-helix domain
AFE_1378	PF00239	Resolvase, N terminal domain
AFE_1378	PF07508	Recombinase
AFE_1378	PF13408	Recombinase zinc beta ribbon domain
AFE_1383	PF13744	Helix-turn-helix domain
AFE_1384	PF05973	AFE_1384
AFE_1387	PF08495	AFE_1387
AFE_1387	PF10442	AFE_1387
AFE_1388	PF00005	ABC transporter
AFE_1388	PF00664	ABC transporter transmembrane region
AFE_1390	PF00005	ABC transporter
AFE_1391	PF01571	Aminomethyltransferase folate-binding domain
AFE_1392	PF00890	FAD binding domain
AFE_1392	PF02910	Fumarate reductase flavoprotein C-term
AFE_1394	PF04542	Sigma-70 region 2
AFE_1394	PF08281	Sigma-70, region 4
AFE_1396	PF13180	PDZ domain
AFE_1396	PF13365	Trypsin-like peptidase domain
AFE_1397	PF00009	Elongation factor Tu GTP binding domain
AFE_1397	PF00679	Elongation factor G C-terminus
AFE_1397	PF03144	Elongation factor Tu domain 2
AFE_1397	PF06421	GTP-binding protein LepA C-terminus
AFE_1398	PF00717	Peptidase S24-like
AFE_1398	PF10502	Signal peptidase, peptidase S26
AFE_1399	PF16137	AFE_1399
AFE_1400	PF00035	Double-stranded RNA binding motif
AFE_1400	PF14622	Ribonuclease-III-like
AFE_1401	PF01926	50S ribosome-binding GTPase
AFE_1401	PF07650	KH domain
AFE_1402	PF02565	Recombination protein O C terminal
AFE_1402	PF11967	Recombination protein O N terminal
AFE_1403	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AFE_1404	PF01648	4'-phosphopantetheinyl transferase superfamily
AFE_1405	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AFE_1405	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AFE_1405	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AFE_1406	PF00294	pfkB family carbohydrate kinase
AFE_1407	PF01171	PP-loop family
AFE_1408	PF01430	Hsp33 protein
AFE_1412	PF11663	AFE_1412
AFE_1413	PF15937	AFE_1413
AFE_1415	PF12161	HsdM N-terminal domain
AFE_1417	PF13673	Acetyltransferase (GNAT) domain
AFE_1418	PF08681	Protein of unknown function (DUF1778)
AFE_1422	PF12850	Calcineurin-like phosphoesterase superfamily domain
AFE_1425	PF00534	Glycosyl transferases group 1
AFE_1425	PF13439	Glycosyltransferase Family 4
AFE_1427	PF00534	Glycosyl transferases group 1
AFE_1427	PF13439	Glycosyltransferase Family 4
AFE_1429	PF00034	Cytochrome c
AFE_1430	PF01545	Cation efflux family
AFE_1431	PF13411	MerR HTH family regulatory protein
AFE_1433	PF00270	DEAD/DEAH box helicase
AFE_1433	PF00271	Helicase conserved C-terminal domain
AFE_1434	PF00072	Response regulator receiver domain
AFE_1434	PF00486	Transcriptional regulatory protein, C terminal
AFE_1435	PF00512	His Kinase A (phospho-acceptor) domain
AFE_1435	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_1435	PF11808	AFE_1435
AFE_1435	PF13188	PAS domain
AFE_1436	PF12849	PBP superfamily domain
AFE_1437	PF00528	Binding-protein-dependent transport system inner membrane component
AFE_1438	PF00528	Binding-protein-dependent transport system inner membrane component
AFE_1439	PF00005	ABC transporter
AFE_1440	PF01895	PhoU domain
AFE_1441	PF02541	Ppx/GppA phosphatase family
AFE_1443	PF09335	AFE_1443
AFE_1444	PF00318	Ribosomal protein S2
AFE_1445	PF00889	Elongation factor TS
AFE_1446	PF00696	Amino acid kinase family
AFE_1447	PF01765	Ribosome recycling factor
AFE_1448	PF01255	Putative undecaprenyl diphosphate synthase
AFE_1449	PF01148	Cytidylyltransferase family
AFE_1450	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AFE_1450	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
AFE_1450	PF13288	DXP reductoisomerase C-terminal domain
AFE_1451	PF02163	Peptidase family M50
AFE_1451	PF13180	PDZ domain
AFE_1452	PF01103	Surface antigen
AFE_1452	PF07244	Surface antigen variable number repeat
AFE_1453	PF03938	Outer membrane protein (OmpH-like)
AFE_1454	PF00132	Bacterial transferase hexapeptide (six repeats)
AFE_1454	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
AFE_1455	PF07977	FabA-like domain
AFE_1456	PF00132	Bacterial transferase hexapeptide (six repeats)
AFE_1456	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
AFE_1457	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AFE_1458	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AFE_1459	PF02684	AFE_1459
AFE_1460	PF01351	Ribonuclease HII
AFE_1461	PF01336	OB-fold nucleic acid binding domain
AFE_1461	PF02811	PHP domain
AFE_1461	PF07733	Bacterial DNA polymerase III alpha subunit
AFE_1461	PF14579	Helix-hairpin-helix motif
AFE_1462	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
AFE_1463	PF01979	Amidohydrolase family
AFE_1464	PF01171	PP-loop family
AFE_1464	PF09179	TilS substrate binding domain
AFE_1464	PF11734	TilS substrate C-terminal domain
AFE_1465	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AFE_1466	PF13419	Haloacid dehalogenase-like hydrolase
AFE_1467	PF01475	Ferric uptake regulator family
AFE_1468	PF00578	AhpC/TSA family
AFE_1469	PF02562	PhoH-like protein
AFE_1469	PF13638	PIN domain
AFE_1471	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AFE_1472	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AFE_1474	PF13417	Glutathione S-transferase, N-terminal domain
AFE_1477	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
AFE_1478	PF01494	FAD binding domain
AFE_1479	PF00766	Electron transfer flavoprotein FAD-binding domain
AFE_1479	PF01012	Electron transfer flavoprotein domain
AFE_1480	PF01012	Electron transfer flavoprotein domain
AFE_1482	PF01152	Bacterial-like globin
AFE_1483	PF00593	TonB dependent receptor
AFE_1484	PF07715	TonB-dependent Receptor Plug Domain
AFE_1485	PF01618	AFE_1485
AFE_1486	PF02472	Biopolymer transport protein ExbD/TolR
AFE_1487	PF03544	Gram-negative bacterial TonB protein C-terminal
AFE_1489	PF01497	Periplasmic binding protein
AFE_1490	PF01032	FecCD transport family
AFE_1491	PF00005	ABC transporter
AFE_1492	PF00593	TonB dependent receptor
AFE_1492	PF07715	TonB-dependent Receptor Plug Domain
AFE_1493	PF13531	Bacterial extracellular solute-binding protein
AFE_1494	PF01497	Periplasmic binding protein
AFE_1495	PF01032	FecCD transport family
AFE_1496	PF01545	Cation efflux family
AFE_1496	PF16916	AFE_1496
AFE_1497	PF03573	outer membrane porin, OprD family
AFE_1498	PF13531	Bacterial extracellular solute-binding protein
AFE_1499	PF00004	ATPase family associated with various cellular activities (AAA)
AFE_1501	PF09723	AFE_1501
AFE_1502	PF00581	Rhodanese-like domain
AFE_1502	PF12796	Ankyrin repeats (3 copies)
AFE_1503	PF00881	Nitroreductase family
AFE_1504	PF03206	AFE_1504
AFE_1505	PF00132	Bacterial transferase hexapeptide (six repeats)
AFE_1505	PF06426	Serine acetyltransferase, N-terminal
AFE_1506	PF00682	HMGL-like
AFE_1507	PF00266	Aminotransferase class-V
AFE_1508	PF01106	NifU-like domain
AFE_1508	PF01592	NifU-like N terminal domain
AFE_1508	PF04324	BFD-like [2Fe-2S] binding domain
AFE_1509	PF01521	Iron-sulphur cluster biosynthesis
AFE_1511	PF04891	AFE_1511
AFE_1512	PF14697	4Fe-4S dicluster domain
AFE_1513	PF05082	Rop-like
AFE_1514	PF03270	Protein of unknown function, DUF269
AFE_1515	PF02579	Dinitrogenase iron-molybdenum cofactor
AFE_1516	PF00148	Nitrogenase component 1 type Oxidoreductase
AFE_1517	PF00148	Nitrogenase component 1 type Oxidoreductase
AFE_1518	PF00111	2Fe-2S iron-sulfur cluster binding domain
AFE_1519	PF00111	2Fe-2S iron-sulfur cluster binding domain
AFE_1520	PF00148	Nitrogenase component 1 type Oxidoreductase
AFE_1520	PF11844	Domain of unknown function (DUF3364)
AFE_1521	PF00148	Nitrogenase component 1 type Oxidoreductase
AFE_1522	PF00142	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
AFE_1524	PF07357	AFE_1524
AFE_1525	PF03747	ADP-ribosylglycohydrolase
AFE_1525	PF03960	ArsC family
AFE_1527	PF00158	Sigma-54 interaction domain
AFE_1527	PF01590	GAF domain
AFE_1527	PF02954	Bacterial regulatory protein, Fis family
AFE_1529	PF02579	Dinitrogenase iron-molybdenum cofactor
AFE_1529	PF04055	Radical SAM superfamily
AFE_1530	PF00037	4Fe-4S binding domain
AFE_1531	PF01521	Iron-sulphur cluster biosynthesis
AFE_1534	PF05484	LRV protein FeS4 cluster
AFE_1535	PF04319	AFE_1535
AFE_1536	PF04319	AFE_1536
AFE_1537	PF00266	Aminotransferase class-V
AFE_1538	PF06988	NifT/FixU protein
AFE_1540	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AFE_1541	PF00111	2Fe-2S iron-sulfur cluster binding domain
AFE_1543	PF13289	AFE_1543
AFE_1544	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AFE_1544	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AFE_1545	PF03459	TOBE domain
AFE_1546	PF00171	Aldehyde dehydrogenase family
AFE_1547	PF07690	Major Facilitator Superfamily
AFE_1548	PF01152	Bacterial-like globin
AFE_1549	PF00924	Mechanosensitive ion channel
AFE_1550	PF00294	pfkB family carbohydrate kinase
AFE_1551	PF00534	Glycosyl transferases group 1
AFE_1551	PF00862	Sucrose synthase
AFE_1551	PF05116	Sucrose-6F-phosphate phosphohydrolase
AFE_1552	PF00534	Glycosyl transferases group 1
AFE_1552	PF00862	Sucrose synthase
AFE_1553	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AFE_1553	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AFE_1554	PF02656	AFE_1554
AFE_1556	PF00589	Phage integrase family
AFE_1561	PF11236	AFE_1561
AFE_1563	PF01381	Helix-turn-helix
AFE_1564	PF15943	AFE_1564
AFE_1565	PF07120	AFE_1565
AFE_1566	PF01695	IstB-like ATP binding protein
AFE_1568	PF02086	D12 class N6 adenine-specific DNA methyltransferase
AFE_1569	PF00436	Single-strand binding protein family
AFE_1572	PF11784	AFE_1572
AFE_1572	PF13086	AAA domain
AFE_1572	PF13087	AAA domain
AFE_1572	PF13195	AFE_1572
AFE_1575	PF00271	Helicase conserved C-terminal domain
AFE_1575	PF04851	Type III restriction enzyme, res subunit
AFE_1575	PF08463	AFE_1575
AFE_1576	PF01420	Type I restriction modification DNA specificity domain
AFE_1577	PF02384	N-6 DNA Methylase
AFE_1577	PF12161	HsdM N-terminal domain
AFE_1578	PF01850	PIN domain
AFE_1579	PF09957	AFE_1579
AFE_1583	PF00216	Bacterial DNA-binding protein
AFE_1584	PF00216	Bacterial DNA-binding protein
AFE_1586	PF00216	Bacterial DNA-binding protein
AFE_1589	PF04221	RelB antitoxin
AFE_1591	PF01553	Acyltransferase
AFE_1603	PF12698	ABC-2 family transporter protein
AFE_1604	PF12698	ABC-2 family transporter protein
AFE_1605	PF00005	ABC transporter
AFE_1605	PF13732	AFE_1605
AFE_1606	PF00005	ABC transporter
AFE_1607	PF16576	AFE_1607
AFE_1610	PF01527	Transposase
AFE_1611	PF01609	Transposase DDE domain
AFE_1613	PF13470	AFE_1613
AFE_1614	PF12728	Helix-turn-helix domain
AFE_1615	PF08401	AFE_1615
AFE_1615	PF12083	AFE_1615
AFE_1621	PF11843	AFE_1621
AFE_1631	PF01381	Helix-turn-helix
AFE_1634	PF00437	Type II/IV secretion system protein
AFE_1636	PF04956	AFE_1636
AFE_1637	PF05101	AFE_1637
AFE_1638	PF03135	AFE_1638
AFE_1642	PF04610	AFE_1642
AFE_1644	PF06146	AFE_1644
AFE_1646	PF13180	PDZ domain
AFE_1646	PF13365	Trypsin-like peptidase domain
AFE_1648	PF00011	Hsp20/alpha crystallin family
AFE_1649	PF00665	Integrase core domain
AFE_1651	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AFE_1651	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AFE_1652	PF00384	Molybdopterin oxidoreductase
AFE_1652	PF01568	Molydopterin dinucleotide binding domain
AFE_1654	PF02634	FdhD/NarQ family
AFE_1655	PF13358	DDE superfamily endonuclease
AFE_1655	PF13592	AFE_1655
AFE_1656	PF00111	2Fe-2S iron-sulfur cluster binding domain
AFE_1656	PF00175	Oxidoreductase NAD-binding domain
AFE_1656	PF00970	Oxidoreductase FAD-binding domain
AFE_1657	PF03063	Prismane/CO dehydrogenase family
AFE_1658	PF00027	Cyclic nucleotide-binding domain
AFE_1658	PF13545	Crp-like helix-turn-helix domain
AFE_1661	PF10070	AFE_1661
AFE_1662	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AFE_1662	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AFE_1663	PF02754	AFE_1663
AFE_1663	PF12838	4Fe-4S dicluster domain
AFE_1664	PF01565	FAD binding domain
AFE_1665	PF01565	FAD binding domain
AFE_1665	PF02913	FAD linked oxidases, C-terminal domain
AFE_1666	PF07005	Protein of unknown function, DUF1537
AFE_1666	PF17042	AFE_1666
AFE_1667	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
AFE_1667	PF09364	XFP N-terminal domain
AFE_1668	PF01614	Bacterial transcriptional regulator
AFE_1668	PF09339	IclR helix-turn-helix domain
AFE_1672	PF01979	Amidohydrolase family
AFE_1673	PF00920	Dehydratase family
AFE_1674	PF01300	Telomere recombination
AFE_1674	PF03481	Putative GTP-binding controlling metal-binding
AFE_1675	PF13500	AAA domain
AFE_1676	PF01116	Fructose-bisphosphate aldolase class-II
AFE_1676	PF07876	Stress responsive A/B Barrel Domain
AFE_1677	PF00092	von Willebrand factor type A domain
AFE_1678	PF07728	AAA domain (dynein-related subfamily)
AFE_1678	PF08406	AFE_1678
AFE_1680	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AFE_1682	PF00210	Ferritin-like domain
AFE_1683	PF00936	BMC domain
AFE_1684	PF00936	BMC domain
AFE_1685	PF00936	BMC domain
AFE_1686	PF03319	Ethanolamine utilisation protein EutN/carboxysome
AFE_1687	PF03319	Ethanolamine utilisation protein EutN/carboxysome
AFE_1688	PF08936	Carboxysome Shell Carbonic Anhydrase
AFE_1689	PF12288	AFE_1689
AFE_1690	PF00101	Ribulose bisphosphate carboxylase, small chain
AFE_1691	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
AFE_1691	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
AFE_1692	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_1692	PF03466	LysR substrate binding domain
AFE_1693	PF09995	AFE_1693
AFE_1694	PF04335	VirB8 protein
AFE_1695	PF03524	Conjugal transfer protein
AFE_1696	PF03524	Conjugal transfer protein
AFE_1698	PF01464	Transglycosylase SLT domain
AFE_1699	PF02534	Type IV secretory system Conjugative DNA transfer
AFE_1706	PF03050	AFE_1706
AFE_1706	PF13005	AFE_1706
AFE_1706	PF13007	AFE_1706
AFE_1706	PF13817	AFE_1706
AFE_1707	PF00563	EAL domain
AFE_1707	PF00990	GGDEF domain
AFE_1707	PF08448	PAS fold
AFE_1707	PF13185	GAF domain
AFE_1707	PF13426	PAS domain
AFE_1708	PF05717	AFE_1708
AFE_1712	PF00563	EAL domain
AFE_1712	PF00990	GGDEF domain
AFE_1716	PF13091	PLD-like domain
AFE_1719	PF02195	ParB-like nuclease domain
AFE_1720	PF13614	AAA domain
AFE_1722	PF16694	AFE_1722
AFE_1723	PF00248	Aldo/keto reductase family
AFE_1725	PF00563	EAL domain
AFE_1725	PF00990	GGDEF domain
AFE_1725	PF08448	PAS fold
AFE_1725	PF13682	Chemoreceptor zinc-binding domain
AFE_1726	PF10502	Signal peptidase, peptidase S26
AFE_1731	PF00795	Carbon-nitrogen hydrolase
AFE_1738	PF01131	DNA topoisomerase
AFE_1738	PF01751	Toprim domain
AFE_1740	PF13091	PLD-like domain
AFE_1741	PF00158	Sigma-54 interaction domain
AFE_1741	PF01590	GAF domain
AFE_1741	PF02954	Bacterial regulatory protein, Fis family
AFE_1742	PF00171	Aldehyde dehydrogenase family
AFE_1743	PF05610	AFE_1743
AFE_1749	PF02586	Uncharacterised ACR, COG2135
AFE_1750	PF00717	Peptidase S24-like
AFE_1751	PF00817	impB/mucB/samB family
AFE_1751	PF11799	impB/mucB/samB family C-terminal domain
AFE_1751	PF13438	AFE_1751
AFE_1753	PF02705	AFE_1753
AFE_1754	PF01381	Helix-turn-helix
AFE_1760	PF00488	MutS domain V
AFE_1760	PF01624	MutS domain I
AFE_1760	PF05188	MutS domain II
AFE_1760	PF05190	MutS family domain IV
AFE_1760	PF05192	MutS domain III
AFE_1761	PF04325	Protein of unknown function (DUF465)
AFE_1763	PF00534	Glycosyl transferases group 1
AFE_1763	PF13439	Glycosyltransferase Family 4
AFE_1764	PF01027	Inhibitor of apoptosis-promoting Bax1
AFE_1766	PF00596	Class II Aldolase and Adducin N-terminal domain
AFE_1767	PF00929	Exonuclease
AFE_1767	PF12843	AFE_1767
AFE_1769	PF01565	FAD binding domain
AFE_1769	PF02754	AFE_1769
AFE_1769	PF02913	FAD linked oxidases, C-terminal domain
AFE_1769	PF11880	AFE_1769
AFE_1769	PF12447	AFE_1769
AFE_1769	PF13183	4Fe-4S dicluster domain
AFE_1770	PF02569	Pantoate-beta-alanine ligase
AFE_1771	PF02548	Ketopantoate hydroxymethyltransferase
AFE_1772	PF01712	Deoxynucleoside kinase
AFE_1774	PF01743	Poly A polymerase head domain
AFE_1775	PF01743	Poly A polymerase head domain
AFE_1775	PF12626	Polymerase A arginine-rich C-terminus
AFE_1775	PF12627	Probable RNA and SrmB- binding site of polymerase A
AFE_1776	PF00535	Glycosyl transferase family 2
AFE_1777	PF00478	IMP dehydrogenase / GMP reductase domain
AFE_1777	PF00571	CBS domain
AFE_1778	PF00117	Glutamine amidotransferase class-I
AFE_1778	PF00958	GMP synthase C terminal domain
AFE_1780	PF01850	PIN domain
AFE_1781	PF04014	Antidote-toxin recognition MazE
AFE_1782	PF13520	Amino acid permease
AFE_1783	PF00696	Amino acid kinase family
AFE_1783	PF01472	PUA domain
AFE_1784	PF00924	Mechanosensitive ion channel
AFE_1787	PF01300	Telomere recombination
AFE_1789	PF00579	tRNA synthetases class I (W and Y)
AFE_1790	PF02616	ScpA/B protein
AFE_1791	PF04079	Putative transcriptional regulators (Ypuh-like)
AFE_1792	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_1793	PF00849	RNA pseudouridylate synthase
AFE_1793	PF01479	S4 domain
AFE_1794	PF00730	HhH-GPD superfamily base excision DNA repair protein
AFE_1797	PF07690	Major Facilitator Superfamily
AFE_1798	PF03729	AFE_1798
AFE_1799	PF00343	Carbohydrate phosphorylase
AFE_1799	PF11897	AFE_1799
AFE_1800	PF00113	Enolase, C-terminal TIM barrel domain
AFE_1801	PF00224	Pyruvate kinase, barrel domain
AFE_1801	PF02887	Pyruvate kinase, alpha/beta domain
AFE_1802	PF01791	DeoC/LacD family aldolase
AFE_1803	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AFE_1803	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_1807	PF00294	pfkB family carbohydrate kinase
AFE_1808	PF01515	Phosphate acetyl/butaryl transferase
AFE_1809	PF00083	Sugar (and other) transporter
AFE_1810	PF00871	Acetokinase family
AFE_1811	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AFE_1811	PF00364	Biotin-requiring enzyme
AFE_1812	PF02779	Transketolase, pyrimidine binding domain
AFE_1812	PF02780	Transketolase, C-terminal domain
AFE_1813	PF00676	Dehydrogenase E1 component
AFE_1814	PF02627	Carboxymuconolactone decarboxylase family
AFE_1815	PF01676	Metalloenzyme superfamily
AFE_1815	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AFE_1816	PF00391	PEP-utilising enzyme, mobile domain
AFE_1816	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AFE_1816	PF02896	PEP-utilising enzyme, TIM barrel domain
AFE_1817	PF13469	Sulfotransferase family
AFE_1818	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
AFE_1818	PF05036	Sporulation related domain
AFE_1819	PF01546	Peptidase family M20/M25/M40
AFE_1819	PF07687	Peptidase dimerisation domain
AFE_1820	PF00132	Bacterial transferase hexapeptide (six repeats)
AFE_1820	PF14602	Hexapeptide repeat of succinyl-transferase
AFE_1820	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
AFE_1821	PF00155	Aminotransferase class I and II
AFE_1823	PF13419	Haloacid dehalogenase-like hydrolase
AFE_1824	PF00892	EamA-like transporter family
AFE_1825	PF08241	Methyltransferase domain
AFE_1826	PF01979	Amidohydrolase family
AFE_1827	PF13406	Transglycosylase SLT domain
AFE_1828	PF00877	NlpC/P60 family
AFE_1830	PF05494	Toluene tolerance, Ttg2
AFE_1831	PF09411	Lipid A 3-O-deacylase (PagL)
AFE_1833	PF00140	Sigma-70 factor, region 1
AFE_1833	PF04539	Sigma-70 region 3
AFE_1833	PF04542	Sigma-70 region 2
AFE_1833	PF04545	Sigma-70, region 4
AFE_1843	PF00456	Transketolase, thiamine diphosphate binding domain
AFE_1843	PF02779	Transketolase, pyrimidine binding domain
AFE_1843	PF02780	Transketolase, C-terminal domain
AFE_1844	PF00037	4Fe-4S binding domain
AFE_1844	PF09313	Domain of unknown function (DUF1971)
AFE_1844	PF11953	Domain of unknown function (DUF3470)
AFE_1845	PF11160	AFE_1845
AFE_1847	PF03595	Voltage-dependent anion channel
AFE_1848	PF00730	HhH-GPD superfamily base excision DNA repair protein
AFE_1851	PF00535	Glycosyl transferase family 2
AFE_1854	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_1856	PF00732	GMC oxidoreductase
AFE_1856	PF05199	GMC oxidoreductase
AFE_1857	PF13561	Enoyl-(Acyl carrier protein) reductase
AFE_1858	PF09137	Glucodextranase, domain N
AFE_1861	PF01329	Pterin 4 alpha carbinolamine dehydratase
AFE_1862	PF00403	Heavy-metal-associated domain
AFE_1865	PF14373	AFE_1865
AFE_1867	PF09917	Uncharacterized protein conserved in bacteria (DUF2147)
AFE_1868	PF00717	Peptidase S24-like
AFE_1868	PF01726	LexA DNA binding domain
AFE_1869	PF03846	Cell division inhibitor SulA
AFE_1870	PF00817	impB/mucB/samB family
AFE_1871	PF02811	PHP domain
AFE_1871	PF07733	Bacterial DNA polymerase III alpha subunit
AFE_1871	PF14579	Helix-hairpin-helix motif
AFE_1872	PF13098	Thioredoxin-like domain
AFE_1873	PF01433	Peptidase family M1
AFE_1873	PF11940	Domain of unknown function (DUF3458)
AFE_1873	PF17432	AFE_1873
AFE_1874	PF01928	CYTH domain
AFE_1874	PF05235	CHAD domain
AFE_1875	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AFE_1876	PF02503	Polyphosphate kinase middle domain
AFE_1876	PF13089	Polyphosphate kinase N-terminal domain
AFE_1876	PF13090	Polyphosphate kinase C-terminal domain
AFE_1877	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AFE_1877	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AFE_1878	PF00873	AcrB/AcrD/AcrF family
AFE_1879	PF00529	HlyD family secretion protein
AFE_1879	PF16576	AFE_1879
AFE_1880	PF02321	Outer membrane efflux protein
AFE_1881	PF13432	Tetratricopeptide repeat
AFE_1882	PF02545	Maf-like protein
AFE_1883	PF00311	Phosphoenolpyruvate carboxylase
AFE_1884	PF17209	AFE_1884
AFE_1885	PF01926	50S ribosome-binding GTPase
AFE_1885	PF13167	AFE_1885
AFE_1885	PF16360	AFE_1885
AFE_1886	PF01145	SPFH domain / Band 7 family
AFE_1886	PF12221	AFE_1886
AFE_1887	PF01145	SPFH domain / Band 7 family
AFE_1888	PF13393	Histidyl-tRNA synthetase
AFE_1889	PF00709	Adenylosuccinate synthetase
AFE_1891	PF00575	S1 RNA binding domain
AFE_1891	PF00773	RNB domain
AFE_1891	PF08206	Ribonuclease B OB domain
AFE_1891	PF08461	Ribonuclease R winged-helix domain
AFE_1892	PF03976	Polyphosphate kinase 2 (PPK2)
AFE_1893	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AFE_1893	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_1894	PF00994	Probable molybdopterin binding domain
AFE_1895	PF01548	AFE_1895
AFE_1895	PF02371	AFE_1895
AFE_1896	PF00551	Formyl transferase
AFE_1897	PF00586	AIR synthase related protein, N-terminal domain
AFE_1897	PF02769	AIR synthase related protein, C-terminal domain
AFE_1898	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AFE_1900	PF01066	CDP-alcohol phosphatidyltransferase
AFE_1901	PF00308	Bacterial dnaA  protein
AFE_1902	PF03631	AFE_1902
AFE_1903	PF02620	AFE_1903
AFE_1904	PF01783	Ribosomal L32p protein family
AFE_1905	PF02504	Fatty acid synthesis protein
AFE_1906	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AFE_1906	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AFE_1907	PF00698	Acyl transferase domain
AFE_1908	PF13561	Enoyl-(Acyl carrier protein) reductase
AFE_1909	PF00550	Phosphopantetheine attachment site
AFE_1910	PF00109	Beta-ketoacyl synthase, N-terminal domain
AFE_1910	PF02801	Beta-ketoacyl synthase, C-terminal domain
AFE_1911	PF01063	Aminotransferase class IV
AFE_1913	PF02223	Thymidylate kinase
AFE_1914	PF09115	DNA polymerase III, delta subunit, C terminal
AFE_1914	PF13177	DNA polymerase III, delta subunit
AFE_1915	PF07238	PilZ domain
AFE_1919	PF12169	DNA polymerase III subunits gamma and tau domain III
AFE_1919	PF13177	DNA polymerase III, delta subunit
AFE_1920	PF02575	YbaB/EbfC DNA-binding family
AFE_1921	PF02132	RecR protein
AFE_1921	PF13662	Toprim domain
AFE_1922	PF00909	Ammonium Transporter Family
AFE_1923	PF01256	Carbohydrate kinase
AFE_1924	PF00202	Aminotransferase class-III
AFE_1925	PF00571	CBS domain
AFE_1926	PF02367	Uncharacterised P-loop hydrolase UPF0079
AFE_1927	PF01119	DNA mismatch repair protein, C-terminal domain
AFE_1927	PF08676	MutL C terminal dimerisation domain
AFE_1927	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_1928	PF01715	IPP transferase
AFE_1929	PF00334	Nucleoside diphosphate kinase
AFE_1930	PF04055	Radical SAM superfamily
AFE_1931	PF13181	Tetratricopeptide repeat
AFE_1931	PF13432	Tetratricopeptide repeat
AFE_1932	PF13413	Helix-turn-helix domain
AFE_1932	PF13464	AFE_1932
AFE_1933	PF04551	GcpE protein
AFE_1934	PF13393	Histidyl-tRNA synthetase
AFE_1935	PF09976	Tetratricopeptide repeat
AFE_1936	PF13360	PQQ-like domain
AFE_1937	PF01926	50S ribosome-binding GTPase
AFE_1937	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AFE_1939	PF12849	PBP superfamily domain
AFE_1940	PF00528	Binding-protein-dependent transport system inner membrane component
AFE_1941	PF00528	Binding-protein-dependent transport system inner membrane component
AFE_1942	PF01814	Hemerythrin HHE cation binding domain
AFE_1942	PF10006	AFE_1942
AFE_1943	PF13098	Thioredoxin-like domain
AFE_1945	PF01925	AFE_1945
AFE_1947	PF00873	AcrB/AcrD/AcrF family
AFE_1948	PF16576	AFE_1948
AFE_1949	PF02321	Outer membrane efflux protein
AFE_1951	PF01161	Phosphatidylethanolamine-binding protein
AFE_1952	PF09968	Uncharacterized protein domain (DUF2202)
AFE_1953	PF12838	4Fe-4S dicluster domain
AFE_1955	PF01475	Ferric uptake regulator family
AFE_1956	PF01266	FAD dependent oxidoreductase
AFE_1957	PF04357	AFE_1957
AFE_1958	PF01103	Surface antigen
AFE_1958	PF07244	Surface antigen variable number repeat
AFE_1960	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
AFE_1961	PF07690	Major Facilitator Superfamily
AFE_1964	PF00487	AFE_1964
AFE_1966	PF01370	NAD dependent epimerase/dehydratase family
AFE_1967	PF01370	NAD dependent epimerase/dehydratase family
AFE_1968	PF00999	Sodium/hydrogen exchanger family
AFE_1968	PF02080	TrkA-C domain
AFE_1968	PF02254	TrkA-N domain
AFE_1969	PF00501	AMP-binding enzyme
AFE_1969	PF13193	AMP-binding enzyme C-terminal domain
AFE_1969	PF16177	AFE_1969
AFE_1970	PF00004	ATPase family associated with various cellular activities (AAA)
AFE_1970	PF02861	Clp amino terminal domain
AFE_1970	PF07724	AAA domain (Cdc48 subfamily)
AFE_1970	PF10431	C-terminal, D2-small domain, of ClpB protein
AFE_1971	PF12832	MFS_1 like family
AFE_1972	PF01264	Chorismate synthase
AFE_1973	PF02649	Type I GTP cyclohydrolase folE2
AFE_1974	PF02779	Transketolase, pyrimidine binding domain
AFE_1974	PF02780	Transketolase, C-terminal domain
AFE_1974	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AFE_1975	PF00348	Polyprenyl synthetase
AFE_1976	PF02609	Exonuclease VII small subunit
AFE_1977	PF07690	Major Facilitator Superfamily
AFE_1978	PF03544	Gram-negative bacterial TonB protein C-terminal
AFE_1979	PF00085	Thioredoxin
AFE_1980	PF02601	AFE_1980
AFE_1980	PF13742	AFE_1980
AFE_1981	PF13360	PQQ-like domain
AFE_1982	PF13767	AFE_1982
AFE_1986	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AFE_1987	PF00149	Calcineurin-like phosphoesterase
AFE_1988	PF00122	E1-E2 ATPase
AFE_1988	PF00689	Cation transporting ATPase, C-terminus
AFE_1988	PF00690	Cation transporter/ATPase, N-terminus
AFE_1988	PF00702	haloacid dehalogenase-like hydrolase
AFE_1989	PF00682	HMGL-like
AFE_1989	PF08502	LeuA allosteric (dimerisation) domain
AFE_1990	PF01037	AsnC family
AFE_1990	PF13412	Winged helix-turn-helix DNA-binding
AFE_1992	PF03595	Voltage-dependent anion channel
AFE_1993	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_1993	PF03466	LysR substrate binding domain
AFE_1994	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AFE_1997	PF00196	Bacterial regulatory proteins, luxR family
AFE_1997	PF03472	Autoinducer binding domain
AFE_1998	PF16245	AFE_1998
AFE_1999	PF00765	Autoinducer synthetase
AFE_2004	PF00583	Acetyltransferase (GNAT) family
AFE_2005	PF01965	DJ-1/PfpI family
AFE_2006	PF04299	Putative FMN-binding domain
AFE_2007	PF01841	Transglutaminase-like superfamily
AFE_2008	PF10604	Polyketide cyclase / dehydrase and lipid transport
AFE_2011	PF00440	Bacterial regulatory proteins, tetR family
AFE_2012	PF17074	AFE_2012
AFE_2013	PF12802	MarR family
AFE_2014	PF02627	Carboxymuconolactone decarboxylase family
AFE_2015	PF00583	Acetyltransferase (GNAT) family
AFE_2017	PF04012	AFE_2017
AFE_2018	PF01906	Putative heavy-metal-binding
AFE_2019	PF01906	Putative heavy-metal-binding
AFE_2021	PF00122	E1-E2 ATPase
AFE_2021	PF00403	Heavy-metal-associated domain
AFE_2021	PF00702	haloacid dehalogenase-like hydrolase
AFE_2022	PF00155	Aminotransferase class I and II
AFE_2023	PF02222	ATP-grasp domain
AFE_2024	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
AFE_2024	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AFE_2025	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
AFE_2025	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
AFE_2026	PF12840	Helix-turn-helix domain
AFE_2027	PF01207	Dihydrouridine synthase (Dus)
AFE_2028	PF00521	DNA gyrase/topoisomerase IV, subunit A
AFE_2029	PF00204	DNA gyrase B
AFE_2029	PF00986	DNA gyrase B subunit, carboxyl terminus
AFE_2029	PF01751	Toprim domain
AFE_2029	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_2031	PF00512	His Kinase A (phospho-acceptor) domain
AFE_2031	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_2032	PF00072	Response regulator receiver domain
AFE_2032	PF00486	Transcriptional regulatory protein, C terminal
AFE_2033	PF03413	Peptidase propeptide and YPEB domain
AFE_2035	PF00873	AcrB/AcrD/AcrF family
AFE_2036	PF16576	AFE_2036
AFE_2037	PF02321	Outer membrane efflux protein
AFE_2040	PF00593	TonB dependent receptor
AFE_2043	PF00873	AcrB/AcrD/AcrF family
AFE_2044	PF13437	HlyD family secretion protein
AFE_2045	PF02321	Outer membrane efflux protein
AFE_2047	PF00231	ATP synthase
AFE_2052	PF00892	EamA-like transporter family
AFE_2053	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
AFE_2053	PF09363	XFP C-terminal domain
AFE_2053	PF09364	XFP N-terminal domain
AFE_2054	PF04338	Protein of unknown function, DUF481
AFE_2056	PF02355	Protein export membrane protein
AFE_2056	PF07549	SecD/SecF GG Motif
AFE_2057	PF02355	Protein export membrane protein
AFE_2057	PF07549	SecD/SecF GG Motif
AFE_2057	PF13721	SecD export protein N-terminal TM region
AFE_2058	PF02699	Preprotein translocase subunit
AFE_2059	PF01702	Queuine tRNA-ribosyltransferase
AFE_2060	PF02547	Queuosine biosynthesis protein
AFE_2061	PF00571	CBS domain
AFE_2061	PF01595	AFE_2061
AFE_2061	PF03471	Transporter associated domain
AFE_2062	PF00571	CBS domain
AFE_2063	PF01053	Cys/Met metabolism PLP-dependent enzyme
AFE_2064	PF00156	Phosphoribosyl transferase domain
AFE_2064	PF13537	Glutamine amidotransferase domain
AFE_2065	PF02674	AFE_2065
AFE_2066	PF02875	Mur ligase family, glutamate ligase domain
AFE_2066	PF08245	Mur ligase middle domain
AFE_2067	PF01039	Carboxyl transferase domain
AFE_2068	PF00290	Tryptophan synthase alpha chain
AFE_2069	PF00291	Pyridoxal-phosphate dependent enzyme
AFE_2070	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
AFE_2071	PF01416	tRNA pseudouridine synthase
AFE_2074	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AFE_2074	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AFE_2075	PF00180	Isocitrate/isopropylmalate dehydrogenase
AFE_2076	PF12804	MobA-like NTP transferase domain
AFE_2077	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
AFE_2078	PF00994	Probable molybdopterin binding domain
AFE_2078	PF03453	MoeA N-terminal region (domain I and II)
AFE_2078	PF03454	MoeA C-terminal region (domain IV)
AFE_2079	PF13091	PLD-like domain
AFE_2080	PF01343	Peptidase family S49
AFE_2081	PF00128	Alpha amylase, catalytic domain
AFE_2082	PF00128	Alpha amylase, catalytic domain
AFE_2082	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AFE_2082	PF11941	Domain of unknown function (DUF3459)
AFE_2083	PF00534	Glycosyl transferases group 1
AFE_2085	PF01738	Dienelactone hydrolase family
AFE_2086	PF00011	Hsp20/alpha crystallin family
AFE_2088	PF08240	Alcohol dehydrogenase GroES-like domain
AFE_2089	PF03734	L,D-transpeptidase catalytic domain
AFE_2090	PF01435	Peptidase family M48
AFE_2091	PF07690	Major Facilitator Superfamily
AFE_2097	PF02624	YcaO-like family
AFE_2103	PF16576	AFE_2103
AFE_2104	PF00873	AcrB/AcrD/AcrF family
AFE_2105	PF00005	ABC transporter
AFE_2107	PF13346	AFE_2107
AFE_2110	PF02637	GatB domain
AFE_2110	PF02934	GatB/GatE catalytic domain
AFE_2111	PF01425	Amidase
AFE_2112	PF02686	Glu-tRNAGln amidotransferase C subunit
AFE_2113	PF04333	AFE_2113
AFE_2114	PF05494	Toluene tolerance, Ttg2
AFE_2115	PF04055	Radical SAM superfamily
AFE_2115	PF11946	AFE_2115
AFE_2117	PF03706	AFE_2117
AFE_2118	PF03176	MMPL family
AFE_2119	PF04794	YdjC-like protein
AFE_2120	PF04055	Radical SAM superfamily
AFE_2121	PF13506	Glycosyl transferase family 21
AFE_2122	PF01370	NAD dependent epimerase/dehydratase family
AFE_2123	PF01048	Phosphorylase superfamily
AFE_2124	PF13243	Prenyltransferase-like
AFE_2124	PF13249	Prenyltransferase-like
AFE_2125	PF00494	Squalene/phytoene synthase
AFE_2126	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AFE_2126	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AFE_2127	PF02556	Preprotein translocase subunit SecB
AFE_2129	PF01850	PIN domain
AFE_2130	PF04014	Antidote-toxin recognition MazE
AFE_2131	PF00171	Aldehyde dehydrogenase family
AFE_2132	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AFE_2132	PF03129	Anticodon binding domain
AFE_2132	PF04073	Aminoacyl-tRNA editing domain
AFE_2133	PF00582	Universal stress protein family
AFE_2134	PF03886	Protein of unknown function (DUF330)
AFE_2135	PF02470	AFE_2135
AFE_2136	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
AFE_2137	PF00857	Isochorismatase family
AFE_2138	PF05299	M61 glycyl aminopeptidase
AFE_2138	PF13180	PDZ domain
AFE_2139	PF13277	YmdB-like protein
AFE_2140	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AFE_2142	PF05164	Cell division protein ZapA
AFE_2144	PF00905	Penicillin binding protein transpeptidase domain
AFE_2144	PF03717	Penicillin-binding Protein dimerisation domain
AFE_2145	PF01386	Ribosomal L25p family
AFE_2145	PF14693	Ribosomal protein TL5, C-terminal domain
AFE_2146	PF01195	Peptidyl-tRNA hydrolase
AFE_2147	PF01926	50S ribosome-binding GTPase
AFE_2147	PF06071	Protein of unknown function (DUF933)
AFE_2148	PF01381	Helix-turn-helix
AFE_2148	PF07883	Cupin domain
AFE_2149	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AFE_2150	PF00146	NADH dehydrogenase
AFE_2152	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AFE_2153	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
AFE_2153	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
AFE_2154	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AFE_2155	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
AFE_2155	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
AFE_2156	PF07728	AAA domain (dynein-related subfamily)
AFE_2156	PF08406	AFE_2156
AFE_2157	PF00092	von Willebrand factor type A domain
AFE_2158	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_2158	PF03466	LysR substrate binding domain
AFE_2159	PF03831	PhnA protein
AFE_2159	PF08274	PhnA Zinc-Ribbon
AFE_2161	PF01841	Transglutaminase-like superfamily
AFE_2161	PF12969	Domain of Unknown Function with PDB structure (DUF3857)
AFE_2166	PF13437	HlyD family secretion protein
AFE_2166	PF13533	Biotin-lipoyl like
AFE_2167	PF00005	ABC transporter
AFE_2167	PF00664	ABC transporter transmembrane region
AFE_2167	PF03412	Peptidase C39 family
AFE_2169	PF02321	Outer membrane efflux protein
AFE_2170	PF01522	Polysaccharide deacetylase
AFE_2171	PF13200	AFE_2171
AFE_2172	PF00144	Beta-lactamase
AFE_2173	PF00293	NUDIX domain
AFE_2174	PF00293	NUDIX domain
AFE_2175	PF00849	RNA pseudouridylate synthase
AFE_2175	PF01479	S4 domain
AFE_2176	PF04371	Porphyromonas-type peptidyl-arginine deiminase
AFE_2177	PF00384	Molybdopterin oxidoreductase
AFE_2177	PF01568	Molydopterin dinucleotide binding domain
AFE_2177	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AFE_2178	PF13247	4Fe-4S dicluster domain
AFE_2179	PF03916	AFE_2179
AFE_2181	PF02613	Nitrate reductase delta subunit
AFE_2183	PF00582	Universal stress protein family
AFE_2184	PF07690	Major Facilitator Superfamily
AFE_2185	PF12802	MarR family
AFE_2186	PF01790	AFE_2186
AFE_2187	PF00580	UvrD/REP helicase N-terminal domain
AFE_2187	PF13361	UvrD-like helicase C-terminal domain
AFE_2188	PF01649	Ribosomal protein S20
AFE_2189	PF00005	ABC transporter
AFE_2190	PF00528	Binding-protein-dependent transport system inner membrane component
AFE_2192	PF02635	DsrE/DsrF-like family
AFE_2193	PF00149	Calcineurin-like phosphoesterase
AFE_2194	PF00270	DEAD/DEAH box helicase
AFE_2194	PF00271	Helicase conserved C-terminal domain
AFE_2194	PF00570	HRDC domain
AFE_2194	PF09382	RQC domain
AFE_2194	PF16124	AFE_2194
AFE_2195	PF01491	Frataxin-like domain
AFE_2196	PF01878	EVE domain
AFE_2199	PF03739	AFE_2199
AFE_2200	PF03739	AFE_2200
AFE_2201	PF00883	Cytosol aminopeptidase family, catalytic domain
AFE_2201	PF02789	Cytosol aminopeptidase family, N-terminal domain
AFE_2203	PF04364	DNA polymerase III chi subunit, HolC
AFE_2204	PF00133	tRNA synthetases class I (I, L, M and V)
AFE_2204	PF08264	Anticodon-binding domain of tRNA
AFE_2204	PF10458	Valyl tRNA synthetase tRNA binding arm
AFE_2205	PF06965	Na+/H+ antiporter 1
AFE_2206	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AFE_2206	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AFE_2209	PF00440	Bacterial regulatory proteins, tetR family
AFE_2209	PF16925	AFE_2209
AFE_2210	PF01738	Dienelactone hydrolase family
AFE_2211	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AFE_2214	PF05656	AFE_2214
AFE_2215	PF05050	Methyltransferase FkbM domain
AFE_2216	PF04140	Isoprenylcysteine carboxyl methyltransferase (ICMT) family
AFE_2217	PF12697	Alpha/beta hydrolase family
AFE_2218	PF13419	Haloacid dehalogenase-like hydrolase
AFE_2219	PF00849	RNA pseudouridylate synthase
AFE_2219	PF01479	S4 domain
AFE_2220	PF00575	S1 RNA binding domain
AFE_2220	PF10150	Ribonuclease E/G family
AFE_2221	PF01406	tRNA synthetases class I (C) catalytic domain
AFE_2221	PF09190	DALR domain
AFE_2222	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AFE_2223	PF00905	Penicillin binding protein transpeptidase domain
AFE_2223	PF00912	Transglycosylase
AFE_2223	PF17092	AFE_2223
AFE_2224	PF00723	Glycosyl hydrolases family 15
AFE_2224	PF09137	Glucodextranase, domain N
AFE_2225	PF13561	Enoyl-(Acyl carrier protein) reductase
AFE_2226	PF01636	Phosphotransferase enzyme family
AFE_2227	PF13419	Haloacid dehalogenase-like hydrolase
AFE_2228	PF00072	Response regulator receiver domain
AFE_2228	PF00486	Transcriptional regulatory protein, C terminal
AFE_2229	PF00512	His Kinase A (phospho-acceptor) domain
AFE_2229	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_2229	PF02702	Osmosensitive K+ channel His kinase sensor domain
AFE_2229	PF13493	Domain of unknown function (DUF4118)
AFE_2231	PF09604	AFE_2231
AFE_2232	PF03814	AFE_2232
AFE_2233	PF00122	E1-E2 ATPase
AFE_2233	PF00702	haloacid dehalogenase-like hydrolase
AFE_2234	PF02669	AFE_2234
AFE_2238	PF00696	Amino acid kinase family
AFE_2239	PF07642	AFE_2239
AFE_2240	PF00543	Nitrogen regulatory protein P-II
AFE_2245	PF00999	Sodium/hydrogen exchanger family
AFE_2246	PF13098	Thioredoxin-like domain
AFE_2250	PF04966	Carbohydrate-selective porin, OprB family
AFE_2251	PF13360	PQQ-like domain
AFE_2253	PF00207	Alpha-2-macroglobulin family
AFE_2253	PF01835	MG2 domain
AFE_2253	PF07678	A-macroglobulin complement component
AFE_2253	PF07703	Alpha-2-macroglobulin family N-terminal region
AFE_2253	PF11974	Alpha-2-macroglobulin MG1 domain
AFE_2254	PF00905	Penicillin binding protein transpeptidase domain
AFE_2254	PF00912	Transglycosylase
AFE_2254	PF06832	AFE_2254
AFE_2255	PF03259	Roadblock/LC7 domain
AFE_2256	PF00753	Metallo-beta-lactamase superfamily
AFE_2257	PF09608	AFE_2257
AFE_2258	PF01925	AFE_2258
AFE_2259	PF00582	Universal stress protein family
AFE_2260	PF01808	AICARFT/IMPCHase bienzyme
AFE_2260	PF02142	MGS-like domain
AFE_2261	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AFE_2261	PF02843	Phosphoribosylglycinamide synthetase, C domain
AFE_2261	PF02844	Phosphoribosylglycinamide synthetase, N domain
AFE_2262	PF01300	Telomere recombination
AFE_2263	PF01218	Coproporphyrinogen III oxidase
AFE_2264	PF01180	Dihydroorotate dehydrogenase
AFE_2266	PF00583	Acetyltransferase (GNAT) family
AFE_2267	PF04185	Phosphoesterase family
AFE_2268	PF03544	Gram-negative bacterial TonB protein C-terminal
AFE_2269	PF02472	Biopolymer transport protein ExbD/TolR
AFE_2270	PF01618	AFE_2270
AFE_2271	PF00486	Transcriptional regulatory protein, C terminal
AFE_2272	PF12092	AFE_2272
AFE_2273	PF01618	AFE_2273
AFE_2274	PF04185	Phosphoesterase family
AFE_2275	PF03544	Gram-negative bacterial TonB protein C-terminal
AFE_2277	PF00083	Sugar (and other) transporter
AFE_2278	PF06754	AFE_2278
AFE_2279	PF05845	Bacterial phosphonate metabolism protein (PhnH)
AFE_2280	PF05861	AFE_2280
AFE_2281	PF06007	AFE_2281
AFE_2282	PF00005	ABC transporter
AFE_2283	PF00005	ABC transporter
AFE_2284	PF07969	Amidohydrolase family
AFE_2285	PF06299	AFE_2285
AFE_2287	PF00392	Bacterial regulatory proteins, gntR family
AFE_2287	PF07702	UTRA domain
AFE_2288	PF07715	TonB-dependent Receptor Plug Domain
AFE_2292	PF00593	TonB dependent receptor
AFE_2292	PF07715	TonB-dependent Receptor Plug Domain
AFE_2297	PF04185	Phosphoesterase family
AFE_2298	PF00593	TonB dependent receptor
AFE_2298	PF07715	TonB-dependent Receptor Plug Domain
AFE_2299	PF01618	AFE_2299
AFE_2300	PF02472	Biopolymer transport protein ExbD/TolR
AFE_2301	PF03544	Gram-negative bacterial TonB protein C-terminal
AFE_2302	PF00593	TonB dependent receptor
AFE_2302	PF07715	TonB-dependent Receptor Plug Domain
AFE_2303	PF10282	Lactonase, 7-bladed beta-propeller
AFE_2304	PF03544	Gram-negative bacterial TonB protein C-terminal
AFE_2306	PF00486	Transcriptional regulatory protein, C terminal
AFE_2312	PF00083	Sugar (and other) transporter
AFE_2314	PF00300	Histidine phosphatase superfamily (branch 1)
AFE_2316	PF03843	AFE_2316
AFE_2318	PF00512	His Kinase A (phospho-acceptor) domain
AFE_2318	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_2319	PF00072	Response regulator receiver domain
AFE_2319	PF00486	Transcriptional regulatory protein, C terminal
AFE_2320	PF00929	Exonuclease
AFE_2321	PF00296	Luciferase-like monooxygenase
AFE_2322	PF01370	NAD dependent epimerase/dehydratase family
AFE_2323	PF11583	P-aminobenzoate N-oxygenase AurF
AFE_2324	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AFE_2324	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AFE_2324	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AFE_2325	PF12732	AFE_2325
AFE_2327	PF00122	E1-E2 ATPase
AFE_2327	PF00689	Cation transporting ATPase, C-terminus
AFE_2327	PF00690	Cation transporter/ATPase, N-terminus
AFE_2327	PF00702	haloacid dehalogenase-like hydrolase
AFE_2328	PF01292	Prokaryotic cytochrome b561
AFE_2330	PF03988	AFE_2330
AFE_2332	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_2332	PF03466	LysR substrate binding domain
AFE_2333	PF07690	Major Facilitator Superfamily
AFE_2336	PF00140	Sigma-70 factor, region 1
AFE_2336	PF03979	Sigma-70 factor, region 1
AFE_2336	PF04539	Sigma-70 region 3
AFE_2336	PF04542	Sigma-70 region 2
AFE_2336	PF04545	Sigma-70, region 4
AFE_2336	PF04546	Sigma-70, non-essential region
AFE_2337	PF01807	CHC2 zinc finger
AFE_2337	PF08275	DNA primase catalytic core, N-terminal domain
AFE_2337	PF10410	DnaB-helicase binding domain of primase
AFE_2337	PF13155	Toprim-like
AFE_2338	PF00488	MutS domain V
AFE_2338	PF01713	Smr domain
AFE_2339	PF09424	Yqey-like protein
AFE_2340	PF01165	Ribosomal protein S21
AFE_2341	PF01725	Ham1 family
AFE_2342	PF04542	Sigma-70 region 2
AFE_2342	PF04545	Sigma-70, region 4
AFE_2343	PF01138	3' exoribonuclease family, domain 1
AFE_2343	PF03725	3' exoribonuclease family, domain 2
AFE_2344	PF00027	Cyclic nucleotide-binding domain
AFE_2345	PF02190	ATP-dependent protease La (LON) domain
AFE_2346	PF04055	Radical SAM superfamily
AFE_2346	PF06969	HemN C-terminal domain
AFE_2348	PF00849	RNA pseudouridylate synthase
AFE_2348	PF01479	S4 domain
AFE_2349	PF07690	Major Facilitator Superfamily
AFE_2350	PF00768	D-alanyl-D-alanine carboxypeptidase
AFE_2351	PF01925	AFE_2351
AFE_2352	PF13649	Methyltransferase domain
AFE_2354	PF02769	AIR synthase related protein, C-terminal domain
AFE_2354	PF13507	CobB/CobQ-like glutamine amidotransferase domain
AFE_2355	PF01259	SAICAR synthetase
AFE_2356	PF00206	Lyase
AFE_2356	PF10397	Adenylosuccinate lyase C-terminus
AFE_2357	PF06804	NlpB/DapX lipoprotein
AFE_2358	PF00701	Dihydrodipicolinate synthetase family
AFE_2360	PF03006	AFE_2360
AFE_2361	PF01520	N-acetylmuramoyl-L-alanine amidase
AFE_2362	PF00085	Thioredoxin
AFE_2363	PF00462	Glutaredoxin
AFE_2364	PF00581	Rhodanese-like domain
AFE_2365	PF11127	Protein of unknown function (DUF2892)
AFE_2366	PF00873	AcrB/AcrD/AcrF family
AFE_2367	PF16576	AFE_2367
AFE_2368	PF02321	Outer membrane efflux protein
AFE_2369	PF01022	Bacterial regulatory protein, arsR family
AFE_2372	PF02384	N-6 DNA Methylase
AFE_2372	PF12161	HsdM N-terminal domain
AFE_2374	PF13166	AFE_2374
AFE_2375	PF00270	DEAD/DEAH box helicase
AFE_2375	PF00271	Helicase conserved C-terminal domain
AFE_2378	PF01420	Type I restriction modification DNA specificity domain
AFE_2380	PF04326	Divergent AAA domain
AFE_2381	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
AFE_2381	PF04851	Type III restriction enzyme, res subunit
AFE_2381	PF12008	Type I restriction and modification enzyme - subunit R C terminal
AFE_2383	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AFE_2384	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
AFE_2385	PF02036	SCP-2 sterol transfer family
AFE_2386	PF00899	ThiF family
AFE_2387	PF01026	TatD related DNase
AFE_2388	PF01494	FAD binding domain
AFE_2389	PF01494	FAD binding domain
AFE_2390	PF04380	AFE_2390
AFE_2393	PF01527	Transposase
AFE_2394	PF13565	AFE_2394
AFE_2397	PF00589	Phage integrase family
AFE_2397	PF02899	Phage integrase, N-terminal SAM-like domain
AFE_2398	PF00589	Phage integrase family
AFE_2399	PF00589	Phage integrase family
AFE_2399	PF02899	Phage integrase, N-terminal SAM-like domain
AFE_2400	PF00665	Integrase core domain
AFE_2404	PF13936	Helix-turn-helix domain
AFE_2408	PF04851	Type III restriction enzyme, res subunit
AFE_2410	PF13673	Acetyltransferase (GNAT) domain
AFE_2411	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AFE_2412	PF00391	PEP-utilising enzyme, mobile domain
AFE_2412	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AFE_2413	PF01695	IstB-like ATP binding protein
AFE_2414	PF04365	Protein of unknown function (DUF497)
AFE_2415	PF14384	AFE_2415
AFE_2419	PF01076	Plasmid recombination enzyme
AFE_2420	PF01545	Cation efflux family
AFE_2421	PF13411	MerR HTH family regulatory protein
AFE_2422	PF08241	Methyltransferase domain
AFE_2423	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AFE_2424	PF01545	Cation efflux family
AFE_2428	PF11604	Copper binding periplasmic protein CusF
AFE_2429	PF01292	Prokaryotic cytochrome b561
AFE_2430	PF01987	Mitochondrial biogenesis AIM24
AFE_2431	PF00873	AcrB/AcrD/AcrF family
AFE_2432	PF01548	AFE_2432
AFE_2432	PF02371	AFE_2432
AFE_2433	PF16576	AFE_2433
AFE_2434	PF02321	Outer membrane efflux protein
AFE_2437	PF02353	Mycolic acid cyclopropane synthetase
AFE_2438	PF09851	AFE_2438
AFE_2439	PF00122	E1-E2 ATPase
AFE_2439	PF00702	haloacid dehalogenase-like hydrolase
AFE_2442	PF14712	AFE_2442
AFE_2447	PF03625	Domain of unknown function DUF302
AFE_2448	PF00403	Heavy-metal-associated domain
AFE_2449	PF00462	Glutaredoxin
AFE_2454	PF00999	Sodium/hydrogen exchanger family
AFE_2457	PF13520	Amino acid permease
AFE_2462	PF00543	Nitrogen regulatory protein P-II
AFE_2463	PF07642	AFE_2463
AFE_2464	PF00696	Amino acid kinase family
AFE_2466	PF14401	AFE_2466
AFE_2467	PF00583	Acetyltransferase (GNAT) family
AFE_2469	PF05717	AFE_2469
AFE_2470	PF03050	AFE_2470
AFE_2470	PF13005	AFE_2470
AFE_2470	PF13007	AFE_2470
AFE_2470	PF13817	AFE_2470
AFE_2471	PF00216	Bacterial DNA-binding protein
AFE_2473	PF02669	AFE_2473
AFE_2474	PF00122	E1-E2 ATPase
AFE_2474	PF00702	haloacid dehalogenase-like hydrolase
AFE_2475	PF03814	AFE_2475
AFE_2476	PF09604	AFE_2476
AFE_2477	PF03814	AFE_2477
AFE_2480	PF03203	AFE_2480
AFE_2481	PF00403	Heavy-metal-associated domain
AFE_2481	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AFE_2481	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_2482	PF00723	Glycosyl hydrolases family 15
AFE_2482	PF09137	Glucodextranase, domain N
AFE_2485	PF11809	AFE_2485
AFE_2491	PF09601	AFE_2491
AFE_2494	PF12112	Protein of unknown function (DUF3579)
AFE_2503	PF06527	AFE_2503
AFE_2504	PF05621	AFE_2504
AFE_2505	PF00665	Integrase core domain
AFE_2505	PF09299	Mu transposase, C-terminal
AFE_2505	PF13518	Helix-turn-helix domain
AFE_2506	PF08721	TnsA endonuclease C terminal
AFE_2506	PF08722	TnsA endonuclease N terminal
AFE_2508	PF02635	DsrE/DsrF-like family
AFE_2509	PF13411	MerR HTH family regulatory protein
AFE_2513	PF08238	Sel1 repeat
AFE_2514	PF00009	Elongation factor Tu GTP binding domain
AFE_2514	PF03144	Elongation factor Tu domain 2
AFE_2514	PF16658	AFE_2514
AFE_2515	PF00583	Acetyltransferase (GNAT) family
AFE_2516	PF00814	Glycoprotease family
AFE_2517	PF00270	DEAD/DEAH box helicase
AFE_2517	PF13307	Helicase C-terminal domain
AFE_2520	PF00877	NlpC/P60 family
AFE_2522	PF04966	Carbohydrate-selective porin, OprB family
AFE_2523	PF04023	FeoA domain
AFE_2524	PF02421	Ferrous iron transport protein B
AFE_2524	PF07664	AFE_2524
AFE_2524	PF07670	Nucleoside recognition
AFE_2525	PF09012	FeoC like transcriptional regulator
AFE_2526	PF00795	Carbon-nitrogen hydrolase
AFE_2527	PF09335	AFE_2527
AFE_2528	PF07722	Peptidase C26
AFE_2531	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_2531	PF03466	LysR substrate binding domain
AFE_2533	PF00248	Aldo/keto reductase family
AFE_2534	PF00850	Histone deacetylase domain
AFE_2536	PF07728	AAA domain (dynein-related subfamily)
AFE_2536	PF08406	AFE_2536
AFE_2542	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AFE_2543	PF04055	Radical SAM superfamily
AFE_2544	PF00890	FAD binding domain
AFE_2544	PF01494	FAD binding domain
AFE_2544	PF05834	AFE_2544
AFE_2546	PF04055	Radical SAM superfamily
AFE_2547	PF01597	Glycine cleavage H-protein
AFE_2548	PF02635	DsrE/DsrF-like family
AFE_2549	PF01597	Glycine cleavage H-protein
AFE_2550	PF02754	AFE_2550
AFE_2551	PF13534	4Fe-4S dicluster domain
AFE_2553	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_2554	PF02754	AFE_2554
AFE_2555	PF13183	4Fe-4S dicluster domain
AFE_2556	PF13686	DsrE/DsrF/DrsH-like family
AFE_2557	PF01206	Sulfurtransferase TusA
AFE_2558	PF00581	Rhodanese-like domain
AFE_2559	PF04055	Radical SAM superfamily
AFE_2559	PF06463	Molybdenum Cofactor Synthesis C
AFE_2559	PF13353	4Fe-4S single cluster domain
AFE_2561	PF01967	MoaC family
AFE_2562	PF06723	MreB/Mbl protein
AFE_2563	PF04085	rod shape-determining protein MreC
AFE_2564	PF04093	AFE_2564
AFE_2565	PF00905	Penicillin binding protein transpeptidase domain
AFE_2565	PF03717	Penicillin-binding Protein dimerisation domain
AFE_2566	PF01098	AFE_2566
AFE_2567	PF00768	D-alanyl-D-alanine carboxypeptidase
AFE_2567	PF07943	Penicillin-binding protein 5, C-terminal domain
AFE_2569	PF03099	Biotin/lipoate A/B protein ligase family
AFE_2570	PF04055	Radical SAM superfamily
AFE_2570	PF16881	AFE_2570
AFE_2571	PF02698	DUF218 domain
AFE_2572	PF03734	L,D-transpeptidase catalytic domain
AFE_2576	PF03029	Conserved hypothetical ATP binding protein
AFE_2578	PF03259	Roadblock/LC7 domain
AFE_2580	PF02091	Glycyl-tRNA synthetase alpha subunit
AFE_2581	PF02092	AFE_2581
AFE_2582	PF13242	HAD-hyrolase-like
AFE_2583	PF08443	RimK-like ATP-grasp domain
AFE_2584	PF01553	Acyltransferase
AFE_2586	PF02754	AFE_2586
AFE_2588	PF02677	AFE_2588
AFE_2589	PF01510	N-acetylmuramoyl-L-alanine amidase
AFE_2590	PF00085	Thioredoxin
AFE_2594	PF00043	Glutathione S-transferase, C-terminal domain
AFE_2594	PF13409	Glutathione S-transferase, N-terminal domain
AFE_2595	PF01638	HxlR-like helix-turn-helix
AFE_2596	PF00682	HMGL-like
AFE_2596	PF08502	LeuA allosteric (dimerisation) domain
AFE_2597	PF00158	Sigma-54 interaction domain
AFE_2597	PF08448	PAS fold
AFE_2597	PF13384	Homeodomain-like domain
AFE_2599	PF13686	DsrE/DsrF/DrsH-like family
AFE_2600	PF01206	Sulfurtransferase TusA
AFE_2601	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_2603	PF13649	Methyltransferase domain
AFE_2604	PF00005	ABC transporter
AFE_2607	PF13411	MerR HTH family regulatory protein
AFE_2608	PF00216	Bacterial DNA-binding protein
AFE_2609	PF01588	Putative tRNA binding domain
AFE_2609	PF03147	Ferredoxin-fold anticodon binding domain
AFE_2609	PF03483	B3/4 domain
AFE_2609	PF03484	tRNA synthetase B5 domain
AFE_2610	PF01409	tRNA synthetases class II core domain (F)
AFE_2610	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AFE_2611	PF00453	Ribosomal protein L20
AFE_2612	PF01632	Ribosomal protein L35
AFE_2613	PF00707	Translation initiation factor IF-3, C-terminal domain
AFE_2613	PF05198	Translation initiation factor IF-3, N-terminal domain
AFE_2614	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AFE_2614	PF02824	TGS domain
AFE_2614	PF03129	Anticodon binding domain
AFE_2614	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AFE_2617	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AFE_2618	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AFE_2619	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AFE_2619	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AFE_2620	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AFE_2621	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
AFE_2622	PF12838	4Fe-4S dicluster domain
AFE_2623	PF00146	NADH dehydrogenase
AFE_2624	PF00384	Molybdopterin oxidoreductase
AFE_2624	PF01568	Molydopterin dinucleotide binding domain
AFE_2624	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AFE_2624	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AFE_2624	PF13510	2Fe-2S iron-sulfur cluster binding domain
AFE_2625	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AFE_2625	PF10531	SLBB domain
AFE_2625	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AFE_2626	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
AFE_2627	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
AFE_2628	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
AFE_2629	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AFE_2630	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
AFE_2632	PF03840	Preprotein translocase SecG subunit
AFE_2633	PF00121	Triosephosphate isomerase
AFE_2634	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AFE_2634	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AFE_2634	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AFE_2634	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AFE_2635	PF00809	Pterin binding enzyme
AFE_2636	PF00004	ATPase family associated with various cellular activities (AAA)
AFE_2636	PF01434	Peptidase family M41
AFE_2636	PF06480	FtsH Extracellular
AFE_2637	PF01523	Putative modulator of DNA gyrase
AFE_2638	PF00317	Ribonucleotide reductase, all-alpha domain
AFE_2638	PF02867	Ribonucleotide reductase, barrel domain
AFE_2638	PF03477	ATP cone domain
AFE_2639	PF00268	Ribonucleotide reductase, small chain
AFE_2641	PF12840	Helix-turn-helix domain
AFE_2642	PF07690	Major Facilitator Superfamily
AFE_2643	PF02635	DsrE/DsrF-like family
AFE_2644	PF00753	Metallo-beta-lactamase superfamily
AFE_2651	PF05425	AFE_2651
AFE_2654	PF00817	impB/mucB/samB family
AFE_2654	PF11798	IMS family HHH motif
AFE_2654	PF11799	impB/mucB/samB family C-terminal domain
AFE_2655	PF01850	PIN domain
AFE_2656	PF01904	Protein of unknown function DUF72
AFE_2658	PF14384	AFE_2658
AFE_2659	PF13520	Amino acid permease
AFE_2660	PF00692	dUTPase
AFE_2661	PF10609	ParA/MinD ATPase like
AFE_2662	PF03992	Antibiotic biosynthesis monooxygenase
AFE_2663	PF01113	Dihydrodipicolinate reductase, N-terminus
AFE_2663	PF05173	Dihydrodipicolinate reductase, C-terminus
AFE_2664	PF00226	DnaJ domain
AFE_2664	PF00684	DnaJ central domain
AFE_2664	PF01556	DnaJ C terminal domain
AFE_2665	PF00012	Hsp70 protein
AFE_2666	PF01025	GrpE
AFE_2667	PF01628	HrcA protein C terminal domain
AFE_2669	PF00471	Ribosomal protein L33
AFE_2670	PF00830	Ribosomal L28 family
AFE_2671	PF00793	DAHP synthetase I family
AFE_2672	PF01588	Putative tRNA binding domain
AFE_2672	PF09334	tRNA synthetases class I (M)
AFE_2673	PF00206	Lyase
AFE_2673	PF10415	Fumarase C C-terminus
AFE_2674	PF01432	Peptidase family M3
AFE_2674	PF08439	Oligopeptidase F
AFE_2675	PF08897	AFE_2675
AFE_2678	PF00534	Glycosyl transferases group 1
AFE_2678	PF08323	Starch synthase catalytic domain
AFE_2679	PF00753	Metallo-beta-lactamase superfamily
AFE_2679	PF07521	RNA-metabolising metallo-beta-lactamase
AFE_2679	PF10996	Beta-Casp domain
AFE_2681	PF01724	Domain of unknown function DUF29
AFE_2681	PF13374	Tetratricopeptide repeat
AFE_2681	PF14559	Tetratricopeptide repeat
AFE_2682	PF00633	Helix-hairpin-helix motif
AFE_2682	PF00730	HhH-GPD superfamily base excision DNA repair protein
AFE_2682	PF10576	Iron-sulfur binding domain of endonuclease III
AFE_2684	PF03895	YadA-like C-terminal region
AFE_2684	PF05658	Head domain of trimeric autotransporter adhesin
AFE_2685	PF00691	OmpA family
AFE_2686	PF08238	Sel1 repeat
AFE_2690	PF02321	Outer membrane efflux protein
AFE_2692	PF13437	HlyD family secretion protein
AFE_2692	PF13533	Biotin-lipoyl like
AFE_2693	PF00005	ABC transporter
AFE_2693	PF00664	ABC transporter transmembrane region
AFE_2693	PF03412	Peptidase C39 family
AFE_2694	PF11180	AFE_2694
AFE_2696	PF00158	Sigma-54 interaction domain
AFE_2696	PF02954	Bacterial regulatory protein, Fis family
AFE_2697	PF09977	AFE_2697
AFE_2697	PF13400	AFE_2697
AFE_2699	PF13432	Tetratricopeptide repeat
AFE_2700	PF00482	Type II secretion system (T2SS), protein F
AFE_2701	PF00482	Type II secretion system (T2SS), protein F
AFE_2702	PF00437	Type II/IV secretion system protein
AFE_2703	PF16968	AFE_2703
AFE_2704	PF00263	AFE_2704
AFE_2704	PF13629	AFE_2704
AFE_2705	PF08666	SAF domain
AFE_2705	PF16976	AFE_2705
AFE_2707	PF07811	AFE_2707
AFE_2708	PF01478	Type IV leader peptidase family
AFE_2709	PF01548	AFE_2709
AFE_2709	PF02371	AFE_2709
AFE_2710	PF04964	AFE_2710
AFE_2713	PF14373	AFE_2713
AFE_2715	PF00583	Acetyltransferase (GNAT) family
AFE_2716	PF12895	Anaphase-promoting complex, cyclosome, subunit 3
AFE_2716	PF13374	Tetratricopeptide repeat
AFE_2716	PF13432	Tetratricopeptide repeat
AFE_2716	PF13469	Sulfotransferase family
AFE_2716	PF14559	Tetratricopeptide repeat
AFE_2717	PF10861	AFE_2717
AFE_2718	PF13597	Anaerobic ribonucleoside-triphosphate reductase
AFE_2719	PF13597	Anaerobic ribonucleoside-triphosphate reductase
AFE_2720	PF04055	Radical SAM superfamily
AFE_2720	PF13353	4Fe-4S single cluster domain
AFE_2721	PF01976	AFE_2721
AFE_2722	PF01136	AFE_2722
AFE_2723	PF01136	AFE_2723
AFE_2724	PF02036	SCP-2 sterol transfer family
AFE_2727	PF00034	Cytochrome c
AFE_2728	PF00106	short chain dehydrogenase
AFE_2729	PF00355	Rieske [2Fe-2S] domain
AFE_2729	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
AFE_2730	PF00032	Cytochrome b(C-terminal)/b6/petD
AFE_2730	PF00033	Cytochrome b(N-terminal)/b6/petB
AFE_2731	PF02167	Cytochrome C1 family
AFE_2733	PF03703	AFE_2733
AFE_2734	PF01292	Prokaryotic cytochrome b561
AFE_2736	PF01728	FtsJ-like methyltransferase
AFE_2737	PF01985	CRS1 / YhbY (CRM) domain
AFE_2738	PF04379	Protein of unknown function (DUF525)
AFE_2739	PF08241	Methyltransferase domain
AFE_2740	PF00009	Elongation factor Tu GTP binding domain
AFE_2740	PF00679	Elongation factor G C-terminus
AFE_2740	PF03144	Elongation factor Tu domain 2
AFE_2741	PF07396	Phosphate-selective porin O and P
AFE_2743	PF01678	Diaminopimelate epimerase
AFE_2745	PF04340	Protein of unknown function, DUF484
AFE_2746	PF00589	Phage integrase family
AFE_2746	PF02899	Phage integrase, N-terminal SAM-like domain
AFE_2747	PF00227	Proteasome subunit
AFE_2748	PF00004	ATPase family associated with various cellular activities (AAA)
AFE_2748	PF07724	AAA domain (Cdc48 subfamily)
AFE_2748	PF10431	C-terminal, D2-small domain, of ClpB protein
AFE_2750	PF04542	Sigma-70 region 2
AFE_2750	PF04545	Sigma-70, region 4
AFE_2752	PF00005	ABC transporter
AFE_2753	PF00448	SRP54-type protein, GTPase domain
AFE_2753	PF02881	SRP54-type protein, helical bundle domain
AFE_2754	PF03602	Conserved hypothetical protein 95
AFE_2755	PF01467	Cytidylyltransferase
AFE_2756	PF00350	Dynamin family
AFE_2757	PF00037	4Fe-4S binding domain
AFE_2758	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AFE_2758	PF06827	Zinc finger found in FPG and IleRS
AFE_2758	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AFE_2759	PF05175	Methyltransferase small domain
AFE_2760	PF00472	RF-1 domain
AFE_2760	PF03462	PCRF domain
AFE_2761	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AFE_2761	PF01488	Shikimate / quinate 5-dehydrogenase
AFE_2761	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AFE_2762	PF13432	Tetratricopeptide repeat
AFE_2762	PF14559	Tetratricopeptide repeat
AFE_2763	PF03550	Outer membrane lipoprotein LolB
AFE_2764	PF00288	GHMP kinases N terminal domain
AFE_2764	PF08544	GHMP kinases C terminal
AFE_2766	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AFE_2766	PF14572	Phosphoribosyl synthetase-associated domain
AFE_2769	PF01396	AFE_2769
AFE_2769	PF04471	Restriction endonuclease
AFE_2771	PF04014	Antidote-toxin recognition MazE
AFE_2773	PF00043	Glutathione S-transferase, C-terminal domain
AFE_2773	PF02798	Glutathione S-transferase, N-terminal domain
AFE_2775	PF01925	AFE_2775
AFE_2776	PF00205	Thiamine pyrophosphate enzyme, central domain
AFE_2776	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AFE_2776	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AFE_2777	PF12146	Putative lysophospholipase
AFE_2779	PF00122	E1-E2 ATPase
AFE_2779	PF00702	haloacid dehalogenase-like hydrolase
AFE_2782	PF11604	Copper binding periplasmic protein CusF
AFE_2785	PF07642	AFE_2785
AFE_2788	PF01906	Putative heavy-metal-binding
AFE_2790	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
AFE_2790	PF04851	Type III restriction enzyme, res subunit
AFE_2790	PF11867	AFE_2790
AFE_2791	PF01420	Type I restriction modification DNA specificity domain
AFE_2792	PF16277	AFE_2792
AFE_2793	PF02384	N-6 DNA Methylase
AFE_2793	PF12161	HsdM N-terminal domain
AFE_2794	PF10544	AFE_2794
AFE_2796	PF12840	Helix-turn-helix domain
AFE_2798	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AFE_2799	PF02805	Metal binding domain of Ada
AFE_2799	PF06029	AlkA N-terminal domain
AFE_2799	PF12833	Helix-turn-helix domain
AFE_2800	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AFE_2801	PF13561	Enoyl-(Acyl carrier protein) reductase
AFE_2802	PF00893	Small Multidrug Resistance protein
AFE_2803	PF03358	NADPH-dependent FMN reductase
AFE_2804	PF10604	Polyketide cyclase / dehydrase and lipid transport
AFE_2805	PF07883	Cupin domain
AFE_2806	PF01841	Transglutaminase-like superfamily
AFE_2807	PF04299	Putative FMN-binding domain
AFE_2811	PF11839	AFE_2811
AFE_2815	PF00557	Metallopeptidase family M24
AFE_2815	PF05195	Aminopeptidase P, N-terminal domain
AFE_2816	PF13767	AFE_2816
AFE_2817	PF13481	AAA domain
AFE_2817	PF13541	Subunit ChlI of Mg-chelatase
AFE_2818	PF00842	Alanine racemase, C-terminal domain
AFE_2818	PF01168	Alanine racemase, N-terminal domain
AFE_2819	PF00772	DnaB-like helicase N terminal domain
AFE_2819	PF03796	DnaB-like helicase C terminal domain
AFE_2820	PF01281	Ribosomal protein L9, N-terminal domain
AFE_2820	PF03948	Ribosomal protein L9, C-terminal domain
AFE_2821	PF09991	AFE_2821
AFE_2823	PF01084	Ribosomal protein S18
AFE_2824	PF01250	Ribosomal protein S6
AFE_2825	PF00933	Glycosyl hydrolase family 3 N terminal domain
AFE_2826	PF13520	Amino acid permease
AFE_2827	PF03734	L,D-transpeptidase catalytic domain
AFE_2828	PF01938	TRAM domain
AFE_2828	PF05958	tRNA (Uracil-5-)-methyltransferase
AFE_2829	PF10108	Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
AFE_2830	PF07027	AFE_2830
AFE_2832	PF00291	Pyridoxal-phosphate dependent enzyme
AFE_2833	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AFE_2834	PF01145	SPFH domain / Band 7 family
AFE_2834	PF16200	AFE_2834
AFE_2836	PF00128	Alpha amylase, catalytic domain
AFE_2836	PF02806	Alpha amylase, C-terminal all-beta domain
AFE_2836	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AFE_2838	PF00483	Nucleotidyl transferase
AFE_2839	PF03065	Glycosyl hydrolase family 57
AFE_2840	PF03065	Glycosyl hydrolase family 57
AFE_2840	PF09094	Domain of unknown function (DUF1925)
AFE_2840	PF09095	Domain of unknown function (DUF1926)
AFE_2841	PF00480	ROK family
AFE_2842	PF01177	Asp/Glu/Hydantoin racemase
AFE_2843	PF04286	AFE_2843
AFE_2844	PF01679	AFE_2844
AFE_2845	PF00436	Single-strand binding protein family
AFE_2848	PF00085	Thioredoxin
AFE_2848	PF14559	Tetratricopeptide repeat
AFE_2848	PF14561	Tetratricopeptide repeat
AFE_2849	PF13180	PDZ domain
AFE_2849	PF13365	Trypsin-like peptidase domain
AFE_2850	PF00589	Phage integrase family
AFE_2850	PF02899	Phage integrase, N-terminal SAM-like domain
AFE_2852	PF01245	Ribosomal protein L19
AFE_2853	PF01746	tRNA (Guanine-1)-methyltransferase
AFE_2854	PF01782	RimM N-terminal domain
AFE_2854	PF05239	PRC-barrel domain
AFE_2855	PF00886	Ribosomal protein S16
AFE_2856	PF00448	SRP54-type protein, GTPase domain
AFE_2856	PF02881	SRP54-type protein, helical bundle domain
AFE_2856	PF02978	Signal peptide binding domain
AFE_2857	PF03358	NADPH-dependent FMN reductase
AFE_2858	PF02040	AFE_2858
AFE_2859	PF12840	Helix-turn-helix domain
AFE_2860	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AFE_2861	PF13533	Biotin-lipoyl like
AFE_2861	PF16576	AFE_2861
AFE_2862	PF00005	ABC transporter
AFE_2863	PF12698	ABC-2 family transporter protein
AFE_2864	PF12698	ABC-2 family transporter protein
AFE_2867	PF13192	Thioredoxin domain
AFE_2868	PF01814	Hemerythrin HHE cation binding domain
AFE_2869	PF01597	Glycine cleavage H-protein
AFE_2872	PF02643	Uncharacterized ACR, COG1430
AFE_2875	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AFE_2875	PF03466	LysR substrate binding domain
AFE_2876	PF13686	DsrE/DsrF/DrsH-like family
AFE_2877	PF00069	Protein kinase domain
AFE_2879	PF13672	Protein phosphatase 2C
AFE_2880	PF00092	von Willebrand factor type A domain
AFE_2882	PF03167	Uracil DNA glycosylase superfamily
AFE_2883	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
AFE_2885	PF02452	PemK-like protein
AFE_2886	PF04014	Antidote-toxin recognition MazE
AFE_2888	PF01850	PIN domain
AFE_2889	PF04014	Antidote-toxin recognition MazE
AFE_2891	PF09685	AFE_2891
AFE_2893	PF00005	ABC transporter
AFE_2893	PF12848	ABC transporter
AFE_2893	PF16326	AFE_2893
AFE_2895	PF00905	Penicillin binding protein transpeptidase domain
AFE_2895	PF03717	Penicillin-binding Protein dimerisation domain
AFE_2896	PF04932	AFE_2896
AFE_2899	PF00348	Polyprenyl synthetase
AFE_2901	PF00072	Response regulator receiver domain
AFE_2901	PF00158	Sigma-54 interaction domain
AFE_2901	PF02954	Bacterial regulatory protein, Fis family
AFE_2902	PF00512	His Kinase A (phospho-acceptor) domain
AFE_2902	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_2902	PF08448	PAS fold
AFE_2903	PF00227	Proteasome subunit
AFE_2905	PF14403	AFE_2905
AFE_2906	PF04168	AFE_2906
AFE_2907	PF01841	Transglutaminase-like superfamily
AFE_2907	PF08379	AFE_2907
AFE_2907	PF09899	AFE_2907
AFE_2910	PF06798	AFE_2910
AFE_2910	PF08298	PrkA AAA domain
AFE_2911	PF00909	Ammonium Transporter Family
AFE_2912	PF04285	AFE_2912
AFE_2913	PF04293	AFE_2913
AFE_2914	PF07642	AFE_2914
AFE_2915	PF00543	Nitrogen regulatory protein P-II
AFE_2916	PF00909	Ammonium Transporter Family
AFE_2917	PF00117	Glutamine amidotransferase class-I
AFE_2919	PF13488	AFE_2919
AFE_2920	PF14373	AFE_2920
AFE_2921	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
AFE_2922	PF02254	TrkA-N domain
AFE_2922	PF07885	Ion channel
AFE_2923	PF00768	D-alanyl-D-alanine carboxypeptidase
AFE_2923	PF07943	Penicillin-binding protein 5, C-terminal domain
AFE_2924	PF00342	Phosphoglucose isomerase
AFE_2925	PF13231	AFE_2925
AFE_2926	PF02537	AFE_2926
AFE_2927	PF02641	Uncharacterized ACR, COG1993
AFE_2928	PF00432	Prenyltransferase and squalene oxidase repeat
AFE_2929	PF02353	Mycolic acid cyclopropane synthetase
AFE_2930	PF06736	AFE_2930
AFE_2931	PF04257	Exodeoxyribonuclease V, gamma subunit
AFE_2932	PF00580	UvrD/REP helicase N-terminal domain
AFE_2932	PF12705	PD-(D/E)XK nuclease superfamily
AFE_2932	PF13361	UvrD-like helicase C-terminal domain
AFE_2933	PF13245	Part of AAA domain
AFE_2933	PF13538	UvrD-like helicase C-terminal domain
AFE_2934	PF00486	Transcriptional regulatory protein, C terminal
AFE_2935	PF00593	TonB dependent receptor
AFE_2936	PF00593	TonB dependent receptor
AFE_2936	PF07715	TonB-dependent Receptor Plug Domain
AFE_2938	PF05717	AFE_2938
AFE_2940	PF00593	TonB dependent receptor
AFE_2942	PF01292	Prokaryotic cytochrome b561
AFE_2944	PF00122	E1-E2 ATPase
AFE_2944	PF00689	Cation transporting ATPase, C-terminus
AFE_2944	PF00690	Cation transporter/ATPase, N-terminus
AFE_2944	PF00702	haloacid dehalogenase-like hydrolase
AFE_2945	PF01641	SelR domain
AFE_2946	PF01625	Peptide methionine sulfoxide reductase
AFE_2947	PF13098	Thioredoxin-like domain
AFE_2948	PF01467	Cytidylyltransferase
AFE_2949	PF02410	Oligomerisation domain
AFE_2950	PF02590	Predicted SPOUT methyltransferase
AFE_2951	PF14346	Domain of unknown function (DUF4398)
AFE_2953	PF02545	Maf-like protein
AFE_2954	PF00575	S1 RNA binding domain
AFE_2954	PF10150	Ribonuclease E/G family
AFE_2955	PF00072	Response regulator receiver domain
AFE_2955	PF00158	Sigma-54 interaction domain
AFE_2957	PF00512	His Kinase A (phospho-acceptor) domain
AFE_2957	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_2959	PF04362	Bacterial Fe(2+) trafficking
AFE_2960	PF00483	Nucleotidyl transferase
AFE_2960	PF01050	Mannose-6-phosphate isomerase
AFE_2962	PF01061	AFE_2962
AFE_2963	PF00005	ABC transporter
AFE_2964	PF05050	Methyltransferase FkbM domain
AFE_2965	PF13946	AFE_2965
AFE_2967	PF00534	Glycosyl transferases group 1
AFE_2968	PF03567	Sulfotransferase family
AFE_2969	PF13489	Methyltransferase domain
AFE_2970	PF01507	Phosphoadenosine phosphosulfate reductase family
AFE_2971	PF00009	Elongation factor Tu GTP binding domain
AFE_2971	PF01583	Adenylylsulphate kinase
AFE_2972	PF01548	AFE_2972
AFE_2972	PF02371	AFE_2972
AFE_2973	PF00459	Inositol monophosphatase family
AFE_2974	PF14323	GxGYxY sequence motif in domain of unknown function
AFE_2974	PF16216	AFE_2974
AFE_2975	PF02563	Polysaccharide biosynthesis/export protein
AFE_2975	PF10531	SLBB domain
AFE_2976	PF00534	Glycosyl transferases group 1
AFE_2977	PF16363	AFE_2977
AFE_2978	PF13649	Methyltransferase domain
AFE_2979	PF13649	Methyltransferase domain
AFE_2983	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AFE_2984	PF01850	PIN domain
AFE_2985	PF00005	ABC transporter
AFE_2985	PF00664	ABC transporter transmembrane region
AFE_2986	PF13673	Acetyltransferase (GNAT) domain
AFE_2987	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AFE_2988	PF00005	ABC transporter
AFE_2988	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AFE_2989	PF00005	ABC transporter
AFE_2989	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AFE_2990	PF00528	Binding-protein-dependent transport system inner membrane component
AFE_2991	PF00528	Binding-protein-dependent transport system inner membrane component
AFE_2992	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AFE_2993	PF01841	Transglutaminase-like superfamily
AFE_2993	PF12969	Domain of Unknown Function with PDB structure (DUF3857)
AFE_2994	PF12969	Domain of Unknown Function with PDB structure (DUF3857)
AFE_2994	PF12970	Domain of Unknown Function with PDB structure (DUF3858)
AFE_2998	PF00593	TonB dependent receptor
AFE_2998	PF07715	TonB-dependent Receptor Plug Domain
AFE_2999	PF01914	AFE_2999
AFE_3000	PF00056	lactate/malate dehydrogenase, NAD binding domain
AFE_3002	PF03544	Gram-negative bacterial TonB protein C-terminal
AFE_3003	PF01618	AFE_3003
AFE_3004	PF02472	Biopolymer transport protein ExbD/TolR
AFE_3005	PF00583	Acetyltransferase (GNAT) family
AFE_3008	PF00534	Glycosyl transferases group 1
AFE_3010	PF00107	Zinc-binding dehydrogenase
AFE_3010	PF00109	Beta-ketoacyl synthase, N-terminal domain
AFE_3010	PF00550	Phosphopantetheine attachment site
AFE_3010	PF00698	Acyl transferase domain
AFE_3010	PF02801	Beta-ketoacyl synthase, C-terminal domain
AFE_3010	PF08659	KR domain
AFE_3010	PF14765	Polyketide synthase dehydratase
AFE_3010	PF16197	AFE_3010
AFE_3011	PF00155	Aminotransferase class I and II
AFE_3012	PF05159	AFE_3012
AFE_3013	PF05159	AFE_3013
AFE_3014	PF00106	short chain dehydrogenase
AFE_3015	PF00730	HhH-GPD superfamily base excision DNA repair protein
AFE_3015	PF14815	NUDIX domain
AFE_3016	PF00884	Sulfatase
AFE_3018	PF00391	PEP-utilising enzyme, mobile domain
AFE_3018	PF02896	PEP-utilising enzyme, TIM barrel domain
AFE_3018	PF05524	PEP-utilising enzyme, N-terminal
AFE_3019	PF00381	PTS HPr component phosphorylation site
AFE_3020	PF03610	PTS system fructose IIA component
AFE_3021	PF03668	AFE_3021
AFE_3022	PF02603	HPr Serine kinase N terminus
AFE_3022	PF07475	HPr Serine kinase C-terminal domain
AFE_3023	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AFE_3024	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AFE_3025	PF00309	AFE_3025
AFE_3025	PF04552	Sigma-54, DNA binding domain
AFE_3025	PF04963	Sigma-54 factor, core binding domain
AFE_3026	PF00005	ABC transporter
AFE_3027	PF03968	OstA-like protein
AFE_3028	PF06835	Lipopolysaccharide-assembly, LptC-related
AFE_3030	PF00571	CBS domain
AFE_3030	PF01380	SIS domain
AFE_3032	PF00483	Nucleotidyl transferase
AFE_3033	PF01636	Phosphotransferase enzyme family
AFE_3034	PF03968	OstA-like protein
AFE_3034	PF04453	Organic solvent tolerance protein
AFE_3035	PF00639	PPIC-type PPIASE domain
AFE_3035	PF09312	SurA N-terminal domain
AFE_3036	PF01061	AFE_3036
AFE_3037	PF01722	BolA-like protein
AFE_3038	PF00462	Glutaredoxin
AFE_3039	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AFE_3040	PF01634	ATP phosphoribosyltransferase
AFE_3041	PF00815	Histidinol dehydrogenase
AFE_3042	PF00155	Aminotransferase class I and II
AFE_3043	PF00475	Imidazoleglycerol-phosphate dehydratase
AFE_3044	PF00117	Glutamine amidotransferase class-I
AFE_3045	PF00977	Histidine biosynthesis protein
AFE_3046	PF00977	Histidine biosynthesis protein
AFE_3047	PF01502	Phosphoribosyl-AMP cyclohydrolase
AFE_3047	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AFE_3048	PF02416	mttA/Hcf106 family
AFE_3049	PF02416	mttA/Hcf106 family
AFE_3050	PF00902	Sec-independent protein translocase protein (TatC)
AFE_3051	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
AFE_3051	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
AFE_3052	PF00101	Ribulose bisphosphate carboxylase, small chain
AFE_3053	PF07728	AAA domain (dynein-related subfamily)
AFE_3053	PF08406	AFE_3053
AFE_3054	PF00092	von Willebrand factor type A domain
AFE_3057	PF00563	EAL domain
AFE_3057	PF00990	GGDEF domain
AFE_3057	PF13185	GAF domain
AFE_3057	PF13426	PAS domain
AFE_3058	PF01979	Amidohydrolase family
AFE_3059	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AFE_3059	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AFE_3060	PF00156	Phosphoribosyl transferase domain
AFE_3061	PF03652	Uncharacterised protein family (UPF0081)
AFE_3062	PF02622	Uncharacterized ACR, COG1678
AFE_3063	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AFE_3063	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AFE_3064	PF08886	Glutamate-cysteine ligase
AFE_3065	PF00285	Citrate synthase
AFE_3067	PF01521	Iron-sulphur cluster biosynthesis
AFE_3068	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AFE_3068	PF00364	Biotin-requiring enzyme
AFE_3068	PF02817	e3 binding domain
AFE_3068	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AFE_3068	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_3069	PF02779	Transketolase, pyrimidine binding domain
AFE_3069	PF02780	Transketolase, C-terminal domain
AFE_3070	PF00676	Dehydrogenase E1 component
AFE_3073	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AFE_3073	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AFE_3074	PF00380	Ribosomal protein S9/S16
AFE_3075	PF00572	Ribosomal protein L13
AFE_3078	PF11127	Protein of unknown function (DUF2892)
AFE_3079	PF00881	Nitroreductase family
AFE_3085	PF00579	tRNA synthetases class I (W and Y)
AFE_3086	PF00122	E1-E2 ATPase
AFE_3086	PF00690	Cation transporter/ATPase, N-terminus
AFE_3086	PF00702	haloacid dehalogenase-like hydrolase
AFE_3089	PF02261	Aspartate decarboxylase
AFE_3090	PF07690	Major Facilitator Superfamily
AFE_3092	PF01926	50S ribosome-binding GTPase
AFE_3093	PF02254	TrkA-N domain
AFE_3093	PF07885	Ion channel
AFE_3094	PF00476	DNA polymerase family A
AFE_3094	PF01367	5'-3' exonuclease, C-terminal SAM fold
AFE_3094	PF01612	3'-5' exonuclease
AFE_3094	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AFE_3095	PF03641	Possible lysine decarboxylase
AFE_3096	PF11191	Protein of unknown function (DUF2782)
AFE_3097	PF01636	Phosphotransferase enzyme family
AFE_3099	PF01292	Prokaryotic cytochrome b561
AFE_3100	PF12836	Helix-hairpin-helix motif
AFE_3101	PF00580	UvrD/REP helicase N-terminal domain
AFE_3101	PF13361	UvrD-like helicase C-terminal domain
AFE_3102	PF00226	DnaJ domain
AFE_3102	PF01556	DnaJ C terminal domain
AFE_3103	PF00156	Phosphoribosyl transferase domain
AFE_3104	PF02811	PHP domain
AFE_3104	PF14520	Helix-hairpin-helix domain
AFE_3104	PF14716	Helix-hairpin-helix domain
AFE_3104	PF14791	DNA polymerase beta thumb
AFE_3104	PF14792	DNA polymerase beta palm
AFE_3105	PF13358	DDE superfamily endonuclease
AFE_3107	PF00034	Cytochrome c
AFE_3108	PF00106	short chain dehydrogenase
AFE_3109	PF00355	Rieske [2Fe-2S] domain
AFE_3109	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
AFE_3110	PF00032	Cytochrome b(C-terminal)/b6/petD
AFE_3110	PF00033	Cytochrome b(N-terminal)/b6/petB
AFE_3111	PF02167	Cytochrome C1 family
AFE_3112	PF05140	AFE_3112
AFE_3113	PF01578	AFE_3113
AFE_3115	PF06146	AFE_3115
AFE_3116	PF13686	DsrE/DsrF/DrsH-like family
AFE_3117	PF01206	Sulfurtransferase TusA
AFE_3118	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AFE_3120	PF10993	AFE_3120
AFE_3121	PF00175	Oxidoreductase NAD-binding domain
AFE_3121	PF00258	Flavodoxin
AFE_3121	PF00667	FAD binding domain
AFE_3122	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AFE_3122	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AFE_3123	PF01507	Phosphoadenosine phosphosulfate reductase family
AFE_3124	PF01507	Phosphoadenosine phosphosulfate reductase family
AFE_3125	PF00009	Elongation factor Tu GTP binding domain
AFE_3126	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AFE_3127	PF01903	CbiX
AFE_3129	PF00654	Voltage gated chloride channel
AFE_3131	PF02416	mttA/Hcf106 family
AFE_3136	PF00512	His Kinase A (phospho-acceptor) domain
AFE_3136	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_3137	PF00072	Response regulator receiver domain
AFE_3137	PF02954	Bacterial regulatory protein, Fis family
AFE_3138	PF13640	2OG-Fe(II) oxygenase superfamily
AFE_3141	PF02082	Transcriptional regulator
AFE_3142	PF07690	Major Facilitator Superfamily
AFE_3143	PF01040	UbiA prenyltransferase family
AFE_3146	PF00127	Copper binding proteins, plastocyanin/azurin family
AFE_3149	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AFE_3150	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AFE_3152	PF00034	Cytochrome c
AFE_3154	PF03050	AFE_3154
AFE_3154	PF13005	AFE_3154
AFE_3157	PF13592	AFE_3157
AFE_3158	PF00183	Hsp90 protein
AFE_3158	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_3161	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AFE_3161	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AFE_3162	PF00583	Acetyltransferase (GNAT) family
AFE_3163	PF01817	Chorismate mutase type II
AFE_3164	PF00005	ABC transporter
AFE_3166	PF00583	Acetyltransferase (GNAT) family
AFE_3168	PF01841	Transglutaminase-like superfamily
AFE_3169	PF07883	Cupin domain
AFE_3170	PF10604	Polyketide cyclase / dehydrase and lipid transport
AFE_3172	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AFE_3173	PF10130	AFE_3173
AFE_3176	PF01695	IstB-like ATP binding protein
AFE_3177	PF00665	Integrase core domain
AFE_3183	PF01548	AFE_3183
AFE_3183	PF02371	AFE_3183
AFE_3186	PF04471	Restriction endonuclease
AFE_3186	PF14338	AFE_3186
AFE_3191	PF04851	Type III restriction enzyme, res subunit
AFE_3192	PF01555	DNA methylase
AFE_3194	PF04326	Divergent AAA domain
AFE_3194	PF13749	ATP-dependent DNA helicase recG C-terminal
AFE_3196	PF06527	AFE_3196
AFE_3196	PF15978	AFE_3196
AFE_3197	PF13401	AAA domain
AFE_3198	PF00665	Integrase core domain
AFE_3198	PF09299	Mu transposase, C-terminal
AFE_3199	PF08721	TnsA endonuclease C terminal
AFE_3199	PF08722	TnsA endonuclease N terminal
AFE_3200	PF01380	SIS domain
AFE_3200	PF13522	Glutamine amidotransferase domain
AFE_3201	PF00132	Bacterial transferase hexapeptide (six repeats)
AFE_3201	PF12804	MobA-like NTP transferase domain
AFE_3202	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
AFE_3202	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AFE_3203	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AFE_3203	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AFE_3204	PF00231	ATP synthase
AFE_3205	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AFE_3205	PF00306	ATP synthase alpha/beta chain, C terminal domain
AFE_3205	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AFE_3206	PF00213	ATP synthase delta (OSCP) subunit
AFE_3207	PF00430	ATP synthase B/B' CF(0)
AFE_3208	PF00137	ATP synthase subunit C
AFE_3209	PF00119	ATP synthase A chain
AFE_3211	PF02195	ParB-like nuclease domain
AFE_3212	PF13614	AAA domain
AFE_3213	PF02527	rRNA small subunit methyltransferase G
AFE_3214	PF01134	Glucose inhibited division protein A
AFE_3214	PF13932	GidA associated domain 3
AFE_3215	PF04170	NlpE N-terminal domain
AFE_3216	PF13649	Methyltransferase domain
AFE_3217	PF00994	Probable molybdopterin binding domain
AFE_3218	PF01544	CorA-like Mg2+ transporter protein
AFE_3219	PF01544	CorA-like Mg2+ transporter protein
AFE_3220	PF01544	CorA-like Mg2+ transporter protein
AFE_3221	PF01544	CorA-like Mg2+ transporter protein
AFE_3222	PF03747	ADP-ribosylglycohydrolase
AFE_3224	PF02678	Pirin
AFE_3224	PF05726	Pirin C-terminal cupin domain
AFE_3229	PF00593	TonB dependent receptor
AFE_3229	PF07715	TonB-dependent Receptor Plug Domain
AFE_3230	PF04185	Phosphoesterase family
AFE_3235	PF01061	AFE_3235
AFE_3236	PF00005	ABC transporter
AFE_3237	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
AFE_3239	PF03232	AFE_3239
AFE_3240	PF02082	Transcriptional regulator
AFE_3241	PF02566	OsmC-like protein
AFE_3242	PF00218	Indole-3-glycerol phosphate synthase
AFE_3243	PF00591	Glycosyl transferase family, a/b domain
AFE_3243	PF02885	Glycosyl transferase family, helical bundle domain
AFE_3244	PF00117	Glutamine amidotransferase class-I
AFE_3245	PF00425	chorismate binding enzyme
AFE_3245	PF04715	Anthranilate synthase component I, N terminal region
AFE_3246	PF13419	Haloacid dehalogenase-like hydrolase
AFE_3247	PF00834	Ribulose-phosphate 3 epimerase family
AFE_3248	PF01116	Fructose-bisphosphate aldolase class-II
AFE_3249	PF00224	Pyruvate kinase, barrel domain
AFE_3249	PF02887	Pyruvate kinase, alpha/beta domain
AFE_3250	PF00162	Phosphoglycerate kinase
AFE_3251	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AFE_3251	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AFE_3252	PF00456	Transketolase, thiamine diphosphate binding domain
AFE_3252	PF02779	Transketolase, pyrimidine binding domain
AFE_3252	PF02780	Transketolase, C-terminal domain
AFE_3253	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AFE_3254	PF00459	Inositol monophosphatase family
AFE_3257	PF04452	RNA methyltransferase
AFE_3258	PF02401	LytB protein
AFE_3259	PF02646	AFE_3259
AFE_3260	PF01741	Large-conductance mechanosensitive channel, MscL
AFE_3262	PF00873	AcrB/AcrD/AcrF family
AFE_3263	PF01548	AFE_3263
AFE_3263	PF02371	AFE_3263
AFE_3264	PF16576	AFE_3264
AFE_3265	PF02321	Outer membrane efflux protein
AFE_3267	PF02639	AFE_3267
AFE_3268	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AFE_3269	PF13470	AFE_3269
AFE_3273	PF07813	LTXXQ motif family protein
AFE_3274	PF00072	Response regulator receiver domain
AFE_3274	PF00486	Transcriptional regulatory protein, C terminal
AFE_3275	PF00512	His Kinase A (phospho-acceptor) domain
AFE_3275	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AFE_3277	PF00206	Lyase
AFE_3277	PF14698	Argininosuccinate lyase C-terminal
AFE_3279	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AFE_3279	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AFE_3280	PF01161	Phosphatidylethanolamine-binding protein
AFE_3281	PF01750	Hydrogenase maturation protease
AFE_3282	PF04809	HupH hydrogenase expression protein, C-terminal conserved region
AFE_3283	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AFE_3283	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
AFE_3285	PF02754	AFE_3285
AFE_3285	PF13183	4Fe-4S dicluster domain
AFE_3286	PF00374	Nickel-dependent hydrogenase
AFE_3287	PF01155	Hydrogenase expression/synthesis hypA family
AFE_3288	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AFE_3289	PF01455	HupF/HypC family
AFE_3290	PF01924	Hydrogenase formation hypA family
AFE_3291	PF16363	AFE_3291
AFE_3292	PF16363	AFE_3292
AFE_3293	PF00483	Nucleotidyl transferase
AFE_3293	PF01050	Mannose-6-phosphate isomerase
AFE_3294	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
AFE_3295	PF00483	Nucleotidyl transferase
AFE_3296	PF00083	Sugar (and other) transporter
AFE_3297	PF13103	TonB C terminal
AFE_3298	PF00490	Delta-aminolevulinic acid dehydratase
AFE_3299	PF02602	Uroporphyrinogen-III synthase HemD
AFE_3300	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AFE_3300	PF03900	Porphobilinogen deaminase, C-terminal domain
AFE_3301	PF12836	Helix-hairpin-helix motif
AFE_3302	PF01230	HIT domain
AFE_3303	PF00202	Aminotransferase class-III
AFE_3304	PF02581	Thiamine monophosphate synthase/TENI
AFE_3305	PF08543	Phosphomethylpyrimidine kinase
AFE_3307	PF00106	short chain dehydrogenase
AFE_3309	PF00308	Bacterial dnaA  protein
AFE_3309	PF08299	Bacterial dnaA protein helix-turn-helix
AFE_3309	PF11638	DnaA N-terminal domain