locus-tag class description LDB30_00005 PF00308 Bacterial dnaA protein LDB30_00005 PF08299 Bacterial dnaA protein helix-turn-helix LDB30_00005 PF11638 DnaA N-terminal domain LDB30_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LDB30_00010 PF02767 DNA polymerase III beta subunit, central domain LDB30_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LDB30_00015 PF02463 RecF/RecN/SMC N terminal domain LDB30_00020 PF01751 Toprim domain LDB30_00020 PF18053 DNA gyrase B subunit insert domain LDB30_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_00020 PF00204 DNA gyrase B LDB30_00020 PF00986 DNA gyrase B subunit, carboxyl terminus LDB30_00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_00060 PF03776 Septum formation topological specificity factor MinE LDB30_00065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LDB30_00070 PF03775 Septum formation inhibitor MinC, C-terminal domain LDB30_00070 PF05209 Septum formation inhibitor MinC, N-terminal domain LDB30_00075 PF11953 Domain of unknown function (DUF3470) LDB30_00075 PF00037 4Fe-4S binding domain LDB30_00080 PF13368 Topoisomerase C-terminal repeat LDB30_00080 PF01131 DNA topoisomerase LDB30_00080 PF01751 Toprim domain LDB30_00085 PF04361 Protein of unknown function (DUF494) LDB30_00090 PF02481 DNA recombination-mediator protein A LDB30_00090 PF17782 DprA winged helix domain LDB30_00100 PF01327 Polypeptide deformylase LDB30_00105 PF02911 Formyl transferase, C-terminal domain LDB30_00105 PF00551 Formyl transferase LDB30_00110 PF01029 NusB family LDB30_00110 PF01189 16S rRNA methyltransferase RsmB/F LDB30_00120 PF00989 PAS fold LDB30_00120 PF00512 His Kinase A (phospho-acceptor) domain LDB30_00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_00120 PF00672 HAMP domain LDB30_00125 PF02954 Bacterial regulatory protein, Fis family LDB30_00125 PF00072 Response regulator receiver domain LDB30_00125 PF00158 Sigma-54 interaction domain LDB30_00135 PF00989 PAS fold LDB30_00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_00135 PF00512 His Kinase A (phospho-acceptor) domain LDB30_00140 PF02954 Bacterial regulatory protein, Fis family LDB30_00140 PF00072 Response regulator receiver domain LDB30_00140 PF00158 Sigma-54 interaction domain LDB30_00145 PF13570 PQQ-like domain LDB30_00145 PF13360 PQQ-like domain LDB30_00145 PF01011 PQQ enzyme repeat LDB30_00155 PF01926 50S ribosome-binding GTPase LDB30_00155 PF12631 MnmE helical domain LDB30_00155 PF10396 GTP-binding protein TrmE N-terminus LDB30_00160 PF14849 YidC periplasmic domain LDB30_00160 PF02096 60Kd inner membrane protein LDB30_00165 PF01809 Putative membrane protein insertion efficiency factor LDB30_00170 PF00825 Ribonuclease P LDB30_00175 PF00468 Ribosomal protein L34 LDB30_00180 PF12848 ABC transporter LDB30_00180 PF00005 ABC transporter LDB30_00185 PF03466 LysR substrate binding domain LDB30_00185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_00190 PF00529 HlyD membrane-fusion protein of T1SS LDB30_00190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDB30_00200 PF07690 Major Facilitator Superfamily LDB30_00270 PF01914 MarC family integral membrane protein LDB30_00280 PF00152 tRNA synthetases class II (D, K and N) LDB30_00280 PF01336 OB-fold nucleic acid binding domain LDB30_00280 PF02938 GAD domain LDB30_00285 PF02445 Quinolinate synthetase A protein LDB30_00295 PF01709 Transcriptional regulator LDB30_00300 PF02075 Crossover junction endodeoxyribonuclease RuvC LDB30_00305 PF07499 RuvA, C-terminal domain LDB30_00305 PF01330 RuvA N terminal domain LDB30_00310 PF05496 Holliday junction DNA helicase RuvB P-loop domain LDB30_00310 PF17864 RuvB AAA lid domain LDB30_00310 PF05491 RuvB C-terminal winged helix domain LDB30_00315 PF03061 Thioesterase superfamily LDB30_00320 PF01618 MotA/TolQ/ExbB proton channel family LDB30_00325 PF02472 Biopolymer transport protein ExbD/TolR LDB30_00335 PF04052 TolB amino-terminal domain LDB30_00335 PF07676 WD40-like Beta Propeller Repeat LDB30_00340 PF06508 Queuosine biosynthesis protein QueC LDB30_00345 PF04055 Radical SAM superfamily LDB30_00355 PF00691 OmpA family LDB30_00365 PF02397 Bacterial sugar transferase LDB30_00380 PF01943 Polysaccharide biosynthesis protein LDB30_00380 PF14667 Polysaccharide biosynthesis C-terminal domain LDB30_00385 PF01209 ubiE/COQ5 methyltransferase family LDB30_00395 PF00534 Glycosyl transferases group 1 LDB30_00405 PF00534 Glycosyl transferases group 1 LDB30_00405 PF13439 Glycosyltransferase Family 4 LDB30_00410 PF00535 Glycosyl transferase family 2 LDB30_00415 PF13439 Glycosyltransferase Family 4 LDB30_00415 PF00534 Glycosyl transferases group 1 LDB30_00455 PF02661 Fic/DOC family LDB30_00455 PF13784 Fic/DOC family N-terminal LDB30_00485 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_00500 PF00005 ABC transporter LDB30_00515 PF01566 Natural resistance-associated macrophage protein LDB30_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_00520 PF00672 HAMP domain LDB30_00520 PF00512 His Kinase A (phospho-acceptor) domain LDB30_00525 PF00486 Transcriptional regulatory protein, C terminal LDB30_00525 PF00072 Response regulator receiver domain LDB30_00535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDB30_00540 PF00873 AcrB/AcrD/AcrF family LDB30_00555 PF07859 alpha/beta hydrolase fold LDB30_00580 PF04305 Protein of unknown function (DUF455) LDB30_00585 PF00814 Glycoprotease family LDB30_00595 PF02660 Glycerol-3-phosphate acyltransferase LDB30_00600 PF02152 Dihydroneopterin aldolase LDB30_00605 PF04055 Radical SAM superfamily LDB30_00605 PF18693 TRAM domain LDB30_00605 PF00919 Uncharacterized protein family UPF0004 LDB30_00630 PF04055 Radical SAM superfamily LDB30_00630 PF06969 HemN C-terminal domain LDB30_00635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_00635 PF03466 LysR substrate binding domain LDB30_00645 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LDB30_00655 PF01565 FAD binding domain LDB30_00655 PF02913 FAD linked oxidases, C-terminal domain LDB30_00660 PF13580 SIS domain LDB30_00665 PF02021 Uncharacterised protein family UPF0102 LDB30_00670 PF04348 LppC putative lipoprotein LDB30_00675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDB30_00685 PF00589 Phage integrase family LDB30_00690 PF01695 IstB-like ATP binding protein LDB30_00695 PF00665 Integrase core domain LDB30_00710 PF00271 Helicase conserved C-terminal domain LDB30_00710 PF00176 SNF2 family N-terminal domain LDB30_00735 PF18272 single-stranded DNA binding TraI N-terminal subdomain LDB30_00735 PF07057 DNA helicase TraI LDB30_00735 PF08751 TrwC relaxase LDB30_00735 PF18340 DNA relaxase TraI 2B/2B-like domain LDB30_00760 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LDB30_00760 PF13542 Helix-turn-helix domain of transposase family ISL3 LDB30_00760 PF01610 Transposase LDB30_00795 PF00589 Phage integrase family LDB30_00835 PF02498 BRO family, N-terminal domain LDB30_00835 PF10548 P22AR C-terminal domain LDB30_00850 PF01695 IstB-like ATP binding protein LDB30_00865 PF00436 Single-strand binding protein family LDB30_00905 PF12728 Helix-turn-helix domain LDB30_00915 PF01553 Acyltransferase LDB30_00915 PF00501 AMP-binding enzyme LDB30_00915 PF13193 AMP-binding enzyme C-terminal domain LDB30_00930 PF01751 Toprim domain LDB30_00930 PF01131 DNA topoisomerase LDB30_00935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_00935 PF03466 LysR substrate binding domain LDB30_00940 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LDB30_00940 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LDB30_00945 PF00101 Ribulose bisphosphate carboxylase, small chain LDB30_00960 PF03319 Ethanolamine utilisation protein EutN/carboxysome LDB30_00970 PF00936 BMC domain LDB30_00975 PF00936 BMC domain LDB30_00980 PF00936 BMC domain LDB30_00985 PF00210 Ferritin-like domain LDB30_00995 PF13614 AAA domain LDB30_01000 PF08406 CbbQ/NirQ/NorQ C-terminal LDB30_01000 PF07728 AAA domain (dynein-related subfamily) LDB30_01010 PF01116 Fructose-bisphosphate aldolase class-II LDB30_01020 PF01300 Telomere recombination LDB30_01020 PF03481 Putative GTP-binding controlling metal-binding LDB30_01025 PF00920 Dehydratase family LDB30_01030 PF01979 Amidohydrolase family LDB30_01060 PF09339 IclR helix-turn-helix domain LDB30_01060 PF01614 Bacterial transcriptional regulator LDB30_01075 PF02913 FAD linked oxidases, C-terminal domain LDB30_01075 PF01565 FAD binding domain LDB30_01080 PF01565 FAD binding domain LDB30_01085 PF13183 4Fe-4S dicluster domain LDB30_01085 PF02754 Cysteine-rich domain LDB30_01090 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LDB30_01090 PF00361 Proton-conducting membrane transporter LDB30_01095 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LDB30_01150 PF04241 Protein of unknown function (DUF423) LDB30_01160 PF00230 Major intrinsic protein LDB30_01170 PF17284 Spermidine synthase tetramerisation domain LDB30_01175 PF02675 S-adenosylmethionine decarboxylase LDB30_01180 PF00005 ABC transporter LDB30_01185 PF02405 Permease MlaE LDB30_01190 PF02470 MlaD protein LDB30_01205 PF00005 ABC transporter LDB30_01210 PF01479 S4 domain LDB30_01215 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LDB30_01225 PF00398 Ribosomal RNA adenine dimethylase LDB30_01240 PF00750 tRNA synthetases class I (R) LDB30_01240 PF05746 DALR anticodon binding domain LDB30_01240 PF03485 Arginyl tRNA synthetase N terminal domain LDB30_01245 PF07690 Major Facilitator Superfamily LDB30_01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_01250 PF03466 LysR substrate binding domain LDB30_01255 PF05175 Methyltransferase small domain LDB30_01260 PF03372 Endonuclease/Exonuclease/phosphatase family LDB30_01270 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LDB30_01275 PF00043 Glutathione S-transferase, C-terminal domain LDB30_01275 PF13417 Glutathione S-transferase, N-terminal domain LDB30_01280 PF03372 Endonuclease/Exonuclease/phosphatase family LDB30_01285 PF00762 Ferrochelatase LDB30_01290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDB30_01295 PF03702 Anhydro-N-acetylmuramic acid kinase LDB30_01300 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LDB30_01300 PF08501 Shikimate dehydrogenase substrate binding domain LDB30_01300 PF01488 Shikimate / quinate 5-dehydrogenase LDB30_01305 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LDB30_01305 PF00437 Type II/IV secretion system protein LDB30_01310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_01310 PF00512 His Kinase A (phospho-acceptor) domain LDB30_01315 PF02954 Bacterial regulatory protein, Fis family LDB30_01315 PF00158 Sigma-54 interaction domain LDB30_01315 PF00072 Response regulator receiver domain LDB30_01320 PF01478 Type IV leader peptidase family LDB30_01320 PF06750 Bacterial Peptidase A24 N-terminal domain LDB30_01325 PF01121 Dephospho-CoA kinase LDB30_01330 PF07072 Cell division protein LDB30_01335 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LDB30_01345 PF01551 Peptidase family M23 LDB30_01345 PF01464 Transglycosylase SLT domain LDB30_01345 PF10145 Phage-related minor tail protein LDB30_01350 PF02954 Bacterial regulatory protein, Fis family LDB30_01365 PF00289 Biotin carboxylase, N-terminal domain LDB30_01365 PF02785 Biotin carboxylase C-terminal domain LDB30_01365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDB30_01370 PF00364 Biotin-requiring enzyme LDB30_01375 PF01220 Dehydroquinase class II LDB30_01390 PF12327 FtsZ family, C-terminal domain LDB30_01390 PF00091 Tubulin/FtsZ family, GTPase domain LDB30_01395 PF02491 SHS2 domain inserted in FTSA LDB30_01400 PF08478 POTRA domain, FtsQ-type LDB30_01400 PF03799 Cell division protein FtsQ LDB30_01405 PF07478 D-ala D-ala ligase C-terminus LDB30_01405 PF01820 D-ala D-ala ligase N-terminus LDB30_01410 PF01565 FAD binding domain LDB30_01410 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LDB30_01415 PF02875 Mur ligase family, glutamate ligase domain LDB30_01415 PF08245 Mur ligase middle domain LDB30_01415 PF01225 Mur ligase family, catalytic domain LDB30_01420 PF04101 Glycosyltransferase family 28 C-terminal domain LDB30_01420 PF03033 Glycosyltransferase family 28 N-terminal domain LDB30_01425 PF01098 Cell cycle protein LDB30_01430 PF02875 Mur ligase family, glutamate ligase domain LDB30_01430 PF08245 Mur ligase middle domain LDB30_01435 PF00953 Glycosyl transferase family 4 LDB30_01435 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LDB30_01440 PF01225 Mur ligase family, catalytic domain LDB30_01440 PF08245 Mur ligase middle domain LDB30_01440 PF02875 Mur ligase family, glutamate ligase domain LDB30_01445 PF01225 Mur ligase family, catalytic domain LDB30_01445 PF02875 Mur ligase family, glutamate ligase domain LDB30_01445 PF08245 Mur ligase middle domain LDB30_01450 PF03717 Penicillin-binding Protein dimerisation domain LDB30_01450 PF00905 Penicillin binding protein transpeptidase domain LDB30_01460 PF01795 MraW methylase family LDB30_01465 PF02381 MraZ protein, putative antitoxin-like LDB30_01480 PF01743 Poly A polymerase head domain LDB30_01480 PF12627 Probable RNA and SrmB- binding site of polymerase A LDB30_01480 PF13735 tRNA nucleotidyltransferase domain 2 putative LDB30_01485 PF00501 AMP-binding enzyme LDB30_01490 PF00043 Glutathione S-transferase, C-terminal domain LDB30_01490 PF02798 Glutathione S-transferase, N-terminal domain LDB30_01495 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LDB30_01505 PF02810 SEC-C motif LDB30_01505 PF07517 SecA DEAD-like domain LDB30_01505 PF01043 SecA preprotein cross-linking domain LDB30_01505 PF07516 SecA Wing and Scaffold domain LDB30_01510 PF01960 ArgJ family LDB30_01515 PF00293 NUDIX domain LDB30_01520 PF00535 Glycosyl transferase family 2 LDB30_01530 PF00534 Glycosyl transferases group 1 LDB30_01530 PF13439 Glycosyltransferase Family 4 LDB30_01535 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LDB30_01550 PF00535 Glycosyl transferase family 2 LDB30_01555 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LDB30_01565 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LDB30_01570 PF03279 Bacterial lipid A biosynthesis acyltransferase LDB30_01575 PF00155 Aminotransferase class I and II LDB30_01580 PF12867 DinB superfamily LDB30_01580 PF03781 Sulfatase-modifying factor enzyme 1 LDB30_01585 PF00588 SpoU rRNA Methylase family LDB30_01590 PF00156 Phosphoribosyl transferase domain LDB30_01595 PF00155 Aminotransferase class I and II LDB30_01600 PF00561 alpha/beta hydrolase fold LDB30_01605 PF08241 Methyltransferase domain LDB30_01615 PF01435 Peptidase family M48 LDB30_01620 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LDB30_01625 PF04376 Arginine-tRNA-protein transferase, N terminus LDB30_01625 PF04377 Arginine-tRNA-protein transferase, C terminus LDB30_01630 PF03649 Uncharacterised protein family (UPF0014) LDB30_01635 PF00929 Exonuclease LDB30_01640 PF00970 Oxidoreductase FAD-binding domain LDB30_01640 PF00111 2Fe-2S iron-sulfur cluster binding domain LDB30_01640 PF00175 Oxidoreductase NAD-binding domain LDB30_01660 PF00440 Bacterial regulatory proteins, tetR family LDB30_01665 PF00696 Amino acid kinase family LDB30_01670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDB30_01670 PF00529 HlyD membrane-fusion protein of T1SS LDB30_01680 PF04055 Radical SAM superfamily LDB30_01680 PF06968 Biotin and Thiamin Synthesis associated domain LDB30_01685 PF02594 Uncharacterised ACR, YggU family COG1872 LDB30_01690 PF02325 YGGT family LDB30_01695 PF03807 NADP oxidoreductase coenzyme F420-dependent LDB30_01695 PF14748 Pyrroline-5-carboxylate reductase dimerisation LDB30_01700 PF01168 Alanine racemase, N-terminal domain LDB30_01705 PF00437 Type II/IV secretion system protein LDB30_01710 PF00437 Type II/IV secretion system protein LDB30_01715 PF00535 Glycosyl transferase family 2 LDB30_01730 PF00753 Metallo-beta-lactamase superfamily LDB30_01735 PF00027 Cyclic nucleotide-binding domain LDB30_01735 PF13545 Crp-like helix-turn-helix domain LDB30_01740 PF02390 Putative methyltransferase LDB30_01745 PF00731 AIR carboxylase LDB30_01750 PF02222 ATP-grasp domain LDB30_01750 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LDB30_01765 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LDB30_01770 PF01668 SmpB protein LDB30_01775 PF13091 PLD-like domain LDB30_01775 PF13396 Phospholipase_D-nuclease N-terminal LDB30_01780 PF03364 Polyketide cyclase / dehydrase and lipid transport LDB30_01785 PF04355 SmpA / OmlA family LDB30_01790 PF01475 Ferric uptake regulator family LDB30_01795 PF00696 Amino acid kinase family LDB30_01795 PF01472 PUA domain LDB30_01800 PF01018 GTP1/OBG LDB30_01800 PF01926 50S ribosome-binding GTPase LDB30_01805 PF01016 Ribosomal L27 protein LDB30_01810 PF00829 Ribosomal prokaryotic L21 protein LDB30_01815 PF00916 Sulfate permease family LDB30_01815 PF01740 STAS domain LDB30_01820 PF00484 Carbonic anhydrase LDB30_01825 PF08267 Cobalamin-independent synthase, N-terminal domain LDB30_01825 PF01717 Cobalamin-independent synthase, Catalytic domain LDB30_01830 PF01209 ubiE/COQ5 methyltransferase family LDB30_01840 PF00561 alpha/beta hydrolase fold LDB30_01840 PF07021 Methionine biosynthesis protein MetW LDB30_01845 PF00561 alpha/beta hydrolase fold LDB30_01855 PF00464 Serine hydroxymethyltransferase LDB30_01860 PF03477 ATP cone domain LDB30_01865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDB30_01865 PF01872 RibD C-terminal domain LDB30_01870 PF00677 Lumazine binding domain LDB30_01875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LDB30_01875 PF00925 GTP cyclohydrolase II LDB30_01880 PF00885 6,7-dimethyl-8-ribityllumazine synthase LDB30_01885 PF01029 NusB family LDB30_01905 PF03109 ABC1 family LDB30_01910 PF00691 OmpA family LDB30_01910 PF04972 BON domain LDB30_01930 PF00009 Elongation factor Tu GTP binding domain LDB30_01930 PF03144 Elongation factor Tu domain 2 LDB30_01930 PF03143 Elongation factor Tu C-terminal domain LDB30_01945 PF00467 KOW motif LDB30_01945 PF02357 Transcription termination factor nusG LDB30_01950 PF00298 Ribosomal protein L11, RNA binding domain LDB30_01950 PF03946 Ribosomal protein L11, N-terminal domain LDB30_01955 PF00687 Ribosomal protein L1p/L10e family LDB30_01960 PF00466 Ribosomal protein L10 LDB30_01965 PF00542 Ribosomal protein L7/L12 C-terminal domain LDB30_01965 PF16320 Ribosomal protein L7/L12 dimerisation domain LDB30_01970 PF00562 RNA polymerase Rpb2, domain 6 LDB30_01970 PF04560 RNA polymerase Rpb2, domain 7 LDB30_01970 PF04561 RNA polymerase Rpb2, domain 2 LDB30_01970 PF10385 RNA polymerase beta subunit external 1 domain LDB30_01970 PF04565 RNA polymerase Rpb2, domain 3 LDB30_01970 PF04563 RNA polymerase beta subunit LDB30_01975 PF04997 RNA polymerase Rpb1, domain 1 LDB30_01975 PF00623 RNA polymerase Rpb1, domain 2 LDB30_01975 PF04983 RNA polymerase Rpb1, domain 3 LDB30_01975 PF05000 RNA polymerase Rpb1, domain 4 LDB30_01975 PF04998 RNA polymerase Rpb1, domain 5 LDB30_01980 PF00164 Ribosomal protein S12/S23 LDB30_01985 PF00177 Ribosomal protein S7p/S5e LDB30_01990 PF03764 Elongation factor G, domain IV LDB30_01990 PF14492 Elongation Factor G, domain II LDB30_01990 PF00679 Elongation factor G C-terminus LDB30_01990 PF03144 Elongation factor Tu domain 2 LDB30_01990 PF00009 Elongation factor Tu GTP binding domain LDB30_01995 PF03143 Elongation factor Tu C-terminal domain LDB30_01995 PF03144 Elongation factor Tu domain 2 LDB30_01995 PF00009 Elongation factor Tu GTP binding domain LDB30_02000 PF00338 Ribosomal protein S10p/S20e LDB30_02005 PF00297 Ribosomal protein L3 LDB30_02010 PF00573 Ribosomal protein L4/L1 family LDB30_02015 PF00276 Ribosomal protein L23 LDB30_02020 PF00181 Ribosomal Proteins L2, RNA binding domain LDB30_02020 PF03947 Ribosomal Proteins L2, C-terminal domain LDB30_02025 PF00203 Ribosomal protein S19 LDB30_02030 PF00237 Ribosomal protein L22p/L17e LDB30_02035 PF07650 KH domain LDB30_02035 PF00189 Ribosomal protein S3, C-terminal domain LDB30_02040 PF00252 Ribosomal protein L16p/L10e LDB30_02045 PF00831 Ribosomal L29 protein LDB30_02050 PF00366 Ribosomal protein S17 LDB30_02055 PF00238 Ribosomal protein L14p/L23e LDB30_02060 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LDB30_02060 PF00467 KOW motif LDB30_02065 PF00281 Ribosomal protein L5 LDB30_02065 PF00673 ribosomal L5P family C-terminus LDB30_02070 PF00253 Ribosomal protein S14p/S29e LDB30_02075 PF00410 Ribosomal protein S8 LDB30_02080 PF00347 Ribosomal protein L6 LDB30_02085 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LDB30_02090 PF00333 Ribosomal protein S5, N-terminal domain LDB30_02090 PF03719 Ribosomal protein S5, C-terminal domain LDB30_02095 PF00327 Ribosomal protein L30p/L7e LDB30_02100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LDB30_02105 PF00344 SecY translocase LDB30_02110 PF05191 Adenylate kinase, active site lid LDB30_02115 PF01176 Translation initiation factor 1A / IF-1 LDB30_02120 PF00444 Ribosomal protein L36 LDB30_02125 PF00416 Ribosomal protein S13/S18 LDB30_02130 PF00411 Ribosomal protein S11 LDB30_02135 PF01479 S4 domain LDB30_02135 PF00163 Ribosomal protein S4/S9 N-terminal domain LDB30_02140 PF01000 RNA polymerase Rpb3/RpoA insert domain LDB30_02140 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LDB30_02140 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LDB30_02145 PF01196 Ribosomal protein L17 LDB30_02150 PF00692 dUTPase LDB30_02155 PF04127 DNA / pantothenate metabolism flavoprotein LDB30_02155 PF02441 Flavoprotein LDB30_02160 PF04002 RadC-like JAB domain LDB30_02170 PF01569 PAP2 superfamily LDB30_02190 PF00156 Phosphoribosyl transferase domain LDB30_02195 PF01048 Phosphorylase superfamily LDB30_02200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDB30_02200 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_02205 PF00462 Glutaredoxin LDB30_02205 PF08534 Redoxin LDB30_02215 PF18429 Domain of unknown function (DUF5609) LDB30_02220 PF00270 DEAD/DEAH box helicase LDB30_02220 PF00271 Helicase conserved C-terminal domain LDB30_02220 PF03461 TRCF domain LDB30_02220 PF17757 UvrB interaction domain LDB30_02220 PF02559 CarD-like/TRCF domain LDB30_02225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LDB30_02230 PF02542 YgbB family LDB30_02235 PF01142 tRNA pseudouridine synthase D (TruD) LDB30_02240 PF00376 MerR family regulatory protein LDB30_02240 PF09278 MerR, DNA binding LDB30_02250 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_02255 PF01580 FtsK/SpoIIIE family LDB30_02255 PF09397 Ftsk gamma domain LDB30_02255 PF17854 FtsK alpha domain LDB30_02255 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LDB30_02260 PF03548 Outer membrane lipoprotein carrier protein LolA LDB30_02270 PF00004 ATPase family associated with various cellular activities (AAA) LDB30_02270 PF16193 AAA C-terminal domain LDB30_02270 PF12002 MgsA AAA+ ATPase C terminal LDB30_02275 PF02403 Seryl-tRNA synthetase N-terminal domain LDB30_02275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDB30_02285 PF17969 L,D-transpeptidase C-terminal domain LDB30_02285 PF03734 L,D-transpeptidase catalytic domain LDB30_02320 PF02576 RimP N-terminal domain LDB30_02320 PF17384 RimP C-terminal SH3 domain LDB30_02325 PF13184 NusA-like KH domain LDB30_02325 PF00575 S1 RNA binding domain LDB30_02325 PF08529 NusA N-terminal domain LDB30_02330 PF00009 Elongation factor Tu GTP binding domain LDB30_02330 PF11987 Translation-initiation factor 2 LDB30_02330 PF08364 Bacterial translation initiation factor IF-2 associated region LDB30_02330 PF04760 Translation initiation factor IF-2, N-terminal region LDB30_02335 PF02033 Ribosome-binding factor A LDB30_02340 PF09157 Pseudouridine synthase II TruB, C-terminal LDB30_02340 PF16198 tRNA pseudouridylate synthase B C-terminal domain LDB30_02340 PF01509 TruB family pseudouridylate synthase (N terminal domain) LDB30_02345 PF00312 Ribosomal protein S15 LDB30_02350 PF03725 3' exoribonuclease family, domain 2 LDB30_02350 PF01138 3' exoribonuclease family, domain 1 LDB30_02350 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LDB30_02350 PF00575 S1 RNA binding domain LDB30_02350 PF00013 KH domain LDB30_02355 PF05193 Peptidase M16 inactive domain LDB30_02355 PF00675 Insulinase (Peptidase family M16) LDB30_02360 PF16123 Hydroxyacylglutathione hydrolase C-terminus LDB30_02360 PF00753 Metallo-beta-lactamase superfamily LDB30_02365 PF01209 ubiE/COQ5 methyltransferase family LDB30_02370 PF00075 RNase H LDB30_02375 PF00929 Exonuclease LDB30_02385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDB30_02395 PF00764 Arginosuccinate synthase LDB30_02400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDB30_02400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDB30_02405 PF00202 Aminotransferase class-III LDB30_02410 PF00696 Amino acid kinase family LDB30_02410 PF13840 ACT domain LDB30_02410 PF01842 ACT domain LDB30_02430 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system LDB30_02445 PF07963 Prokaryotic N-terminal methylation motif LDB30_02445 PF00114 Pilin (bacterial filament) LDB30_02460 PF00923 Transaldolase/Fructose-6-phosphate aldolase LDB30_02470 PF01476 LysM domain LDB30_02470 PF01464 Transglycosylase SLT domain LDB30_02475 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDB30_02480 PF00330 Aconitase family (aconitate hydratase) LDB30_02485 PF00180 Isocitrate/isopropylmalate dehydrogenase LDB30_02490 PF00549 CoA-ligase LDB30_02490 PF08442 ATP-grasp domain LDB30_02500 PF00549 CoA-ligase LDB30_02500 PF02629 CoA binding domain LDB30_02505 PF00795 Carbon-nitrogen hydrolase LDB30_02505 PF02540 NAD synthase LDB30_02510 PF00543 Nitrogen regulatory protein P-II LDB30_02515 PF13525 Outer membrane lipoprotein LDB30_02520 PF00849 RNA pseudouridylate synthase LDB30_02520 PF01479 S4 domain LDB30_02525 PF02578 Multi-copper polyphenol oxidoreductase laccase LDB30_02530 PF03079 ARD/ARD' family LDB30_02535 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LDB30_02535 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LDB30_02545 PF00596 Class II Aldolase and Adducin N-terminal domain LDB30_02555 PF01327 Polypeptide deformylase LDB30_02560 PF13520 Amino acid permease LDB30_02565 PF16363 GDP-mannose 4,6 dehydratase LDB30_02570 PF04321 RmlD substrate binding domain LDB30_02585 PF00483 Nucleotidyl transferase LDB30_02595 PF00072 Response regulator receiver domain LDB30_02595 PF00158 Sigma-54 interaction domain LDB30_02605 PF00512 His Kinase A (phospho-acceptor) domain LDB30_02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_02610 PF02463 RecF/RecN/SMC N terminal domain LDB30_02615 PF01513 ATP-NAD kinase LDB30_02620 PF03309 Type III pantothenate kinase LDB30_02625 PF08279 HTH domain LDB30_02625 PF02237 Biotin protein ligase C terminal domain LDB30_02625 PF03099 Biotin/lipoate A/B protein ligase family LDB30_02630 PF00171 Aldehyde dehydrogenase family LDB30_02640 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LDB30_02640 PF06144 DNA polymerase III, delta subunit LDB30_02650 PF13603 Leucyl-tRNA synthetase, Domain 2 LDB30_02650 PF08264 Anticodon-binding domain of tRNA LDB30_02650 PF00133 tRNA synthetases class I (I, L, M and V) LDB30_02655 PF03358 NADPH-dependent FMN reductase LDB30_02660 PF04264 YceI-like domain LDB30_02665 PF01427 D-ala-D-ala dipeptidase LDB30_02670 PF06827 Zinc finger found in FPG and IleRS LDB30_02670 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LDB30_02670 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LDB30_02680 PF16916 Dimerisation domain of Zinc Transporter LDB30_02680 PF01545 Cation efflux family LDB30_02685 PF03951 Glutamine synthetase, beta-Grasp domain LDB30_02685 PF00120 Glutamine synthetase, catalytic domain LDB30_02695 PF01975 Survival protein SurE LDB30_02705 PF00140 Sigma-70 factor, region 1.2 LDB30_02705 PF04545 Sigma-70, region 4 LDB30_02705 PF04542 Sigma-70 region 2 LDB30_02705 PF04539 Sigma-70 region 3 LDB30_02710 PF04430 Protein of unknown function (DUF498/DUF598) LDB30_02715 PF00155 Aminotransferase class I and II LDB30_02720 PF00742 Homoserine dehydrogenase LDB30_02720 PF03447 Homoserine dehydrogenase, NAD binding domain LDB30_02720 PF01842 ACT domain LDB30_02725 PF00291 Pyridoxal-phosphate dependent enzyme LDB30_02735 PF01368 DHH family LDB30_02735 PF02272 DHHA1 domain LDB30_02735 PF17768 RecJ OB domain LDB30_02740 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LDB30_02745 PF01850 PIN domain LDB30_02755 PF01336 OB-fold nucleic acid binding domain LDB30_02755 PF00152 tRNA synthetases class II (D, K and N) LDB30_02760 PF02687 FtsX-like permease family LDB30_02760 PF12704 MacB-like periplasmic core domain LDB30_02765 PF00005 ABC transporter LDB30_02775 PF03772 Competence protein LDB30_02775 PF00753 Metallo-beta-lactamase superfamily LDB30_02780 PF01618 MotA/TolQ/ExbB proton channel family LDB30_02785 PF02472 Biopolymer transport protein ExbD/TolR LDB30_02800 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LDB30_02805 PF03966 Trm112p-like protein LDB30_02810 PF02348 Cytidylyltransferase LDB30_02815 PF00719 Inorganic pyrophosphatase LDB30_02835 PF00132 Bacterial transferase hexapeptide (six repeats) LDB30_02865 PF03992 Antibiotic biosynthesis monooxygenase LDB30_02885 PF02899 Phage integrase, N-terminal SAM-like domain LDB30_02885 PF00589 Phage integrase family LDB30_02890 PF02899 Phage integrase, N-terminal SAM-like domain LDB30_02890 PF00589 Phage integrase family LDB30_02905 PF13401 AAA domain LDB30_02905 PF01471 Putative peptidoglycan binding domain LDB30_02940 PF03167 Uracil DNA glycosylase superfamily LDB30_02945 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LDB30_02950 PF10431 C-terminal, D2-small domain, of ClpB protein LDB30_02950 PF00004 ATPase family associated with various cellular activities (AAA) LDB30_02950 PF07724 AAA domain (Cdc48 subfamily) LDB30_02950 PF17871 AAA lid domain LDB30_02950 PF02861 Clp amino terminal domain, pathogenicity island component LDB30_02955 PF02617 ATP-dependent Clp protease adaptor protein ClpS LDB30_02965 PF01965 DJ-1/PfpI family LDB30_02970 PF03572 Peptidase family S41 LDB30_02970 PF13180 PDZ domain LDB30_02980 PF01676 Metalloenzyme superfamily LDB30_02980 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LDB30_02985 PF00343 Carbohydrate phosphorylase LDB30_02995 PF00581 Rhodanese-like domain LDB30_03000 PF00294 pfkB family carbohydrate kinase LDB30_03010 PF00438 S-adenosylmethionine synthetase, N-terminal domain LDB30_03010 PF02772 S-adenosylmethionine synthetase, central domain LDB30_03010 PF02773 S-adenosylmethionine synthetase, C-terminal domain LDB30_03015 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LDB30_03015 PF05221 S-adenosyl-L-homocysteine hydrolase LDB30_03020 PF02219 Methylenetetrahydrofolate reductase LDB30_03025 PF00485 Phosphoribulokinase / Uridine kinase family LDB30_03040 PF14306 PUA-like domain LDB30_03040 PF01747 ATP-sulfurylase LDB30_03045 PF00156 Phosphoribosyl transferase domain LDB30_03050 PF00118 TCP-1/cpn60 chaperonin family LDB30_03055 PF00166 Chaperonin 10 Kd subunit LDB30_03065 PF11412 Disulphide bond corrector protein DsbC LDB30_03065 PF02683 Cytochrome C biogenesis protein transmembrane region LDB30_03075 PF01063 Amino-transferase class IV LDB30_03080 PF08335 GlnD PII-uridylyltransferase LDB30_03080 PF03710 Glutamate-ammonia ligase adenylyltransferase LDB30_03090 PF00795 Carbon-nitrogen hydrolase LDB30_03095 PF06472 ABC transporter transmembrane region 2 LDB30_03095 PF00005 ABC transporter LDB30_03110 PF01252 Signal peptidase (SPase) II LDB30_03115 PF00133 tRNA synthetases class I (I, L, M and V) LDB30_03115 PF08264 Anticodon-binding domain of tRNA LDB30_03115 PF06827 Zinc finger found in FPG and IleRS LDB30_03120 PF01687 Riboflavin kinase LDB30_03120 PF06574 FAD synthetase LDB30_03130 PF03023 Lipid II flippase MurJ LDB30_03140 PF08340 Domain of unknown function (DUF1732) LDB30_03140 PF03755 YicC-like family, N-terminal region LDB30_03145 PF00625 Guanylate kinase LDB30_03150 PF01192 RNA polymerase Rpb6 LDB30_03155 PF13291 ACT domain LDB30_03155 PF02824 TGS domain LDB30_03155 PF04607 Region found in RelA / SpoT proteins LDB30_03160 PF01042 Endoribonuclease L-PSP LDB30_03170 PF00270 DEAD/DEAH box helicase LDB30_03170 PF13749 Putative ATP-dependent DNA helicase recG C-terminal LDB30_03170 PF17191 RecG wedge domain LDB30_03180 PF01593 Flavin containing amine oxidoreductase LDB30_03185 PF01594 AI-2E family transporter LDB30_03190 PF01875 Memo-like protein LDB30_03195 PF01871 AMMECR1 LDB30_03200 PF04055 Radical SAM superfamily LDB30_03205 PF02321 Outer membrane efflux protein LDB30_03210 PF04715 Anthranilate synthase component I, N terminal region LDB30_03210 PF00425 chorismate binding enzyme LDB30_03240 PF00589 Phage integrase family LDB30_03265 PF00271 Helicase conserved C-terminal domain LDB30_03265 PF03880 DbpA RNA binding domain LDB30_03265 PF00270 DEAD/DEAH box helicase LDB30_03270 PF00313 'Cold-shock' DNA-binding domain LDB30_03275 PF00271 Helicase conserved C-terminal domain LDB30_03275 PF17764 3′ DNA-binding domain (3′BD) LDB30_03275 PF00270 DEAD/DEAH box helicase LDB30_03275 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LDB30_03275 PF18074 Primosomal protein N C-terminal domain LDB30_03280 PF01040 UbiA prenyltransferase family LDB30_03290 PF00398 Ribosomal RNA adenine dimethylase LDB30_03300 PF04055 Radical SAM superfamily LDB30_03300 PF01938 TRAM domain LDB30_03300 PF00919 Uncharacterized protein family UPF0004 LDB30_03305 PF02562 PhoH-like protein LDB30_03310 PF02130 Uncharacterized protein family UPF0054 LDB30_03315 PF03471 Transporter associated domain LDB30_03315 PF00571 CBS domain LDB30_03320 PF00795 Carbon-nitrogen hydrolase LDB30_03325 PF01523 Putative modulator of DNA gyrase LDB30_03335 PF00005 ABC transporter LDB30_03345 PF00950 ABC 3 transport family LDB30_03360 PF01370 NAD dependent epimerase/dehydratase family LDB30_03390 PF13439 Glycosyltransferase Family 4 LDB30_03390 PF00534 Glycosyl transferases group 1 LDB30_03395 PF13439 Glycosyltransferase Family 4 LDB30_03395 PF00534 Glycosyl transferases group 1 LDB30_03400 PF00664 ABC transporter transmembrane region LDB30_03400 PF00005 ABC transporter LDB30_03405 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LDB30_03405 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LDB30_03405 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LDB30_03415 PF00300 Histidine phosphatase superfamily (branch 1) LDB30_03415 PF13456 Reverse transcriptase-like LDB30_03430 PF08241 Methyltransferase domain LDB30_03435 PF00330 Aconitase family (aconitate hydratase) LDB30_03440 PF00694 Aconitase C-terminal domain LDB30_03450 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LDB30_03450 PF01243 Pyridoxamine 5'-phosphate oxidase LDB30_03455 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LDB30_03465 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LDB30_03465 PF06481 COX Aromatic Rich Motif LDB30_03470 PF00115 Cytochrome C and Quinol oxidase polypeptide I LDB30_03475 PF00510 Cytochrome c oxidase subunit III LDB30_03485 PF01040 UbiA prenyltransferase family LDB30_03490 PF07690 Major Facilitator Superfamily LDB30_03495 PF02673 Bacitracin resistance protein BacA LDB30_03500 PF01272 Transcription elongation factor, GreA/GreB, C-term LDB30_03500 PF03449 Transcription elongation factor, N-terminal LDB30_03505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDB30_03505 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LDB30_03505 PF02142 MGS-like domain LDB30_03510 PF00117 Glutamine amidotransferase class-I LDB30_03510 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDB30_03520 PF05690 Thiazole biosynthesis protein ThiG LDB30_03520 PF02597 ThiS family LDB30_03525 PF05690 Thiazole biosynthesis protein ThiG LDB30_03535 PF08245 Mur ligase middle domain LDB30_03535 PF02875 Mur ligase family, glutamate ligase domain LDB30_03535 PF01225 Mur ligase family, catalytic domain LDB30_03540 PF02441 Flavoprotein LDB30_03545 PF00005 ABC transporter LDB30_03550 PF02405 Permease MlaE LDB30_03570 PF00899 ThiF family LDB30_03580 PF12704 MacB-like periplasmic core domain LDB30_03580 PF02687 FtsX-like permease family LDB30_03585 PF00005 ABC transporter LDB30_03595 PF00085 Thioredoxin LDB30_03600 PF07498 Rho termination factor, N-terminal domain LDB30_03600 PF07497 Rho termination factor, RNA-binding domain LDB30_03600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDB30_03605 PF01197 Ribosomal protein L31 LDB30_03610 PF00390 Malic enzyme, N-terminal domain LDB30_03610 PF03949 Malic enzyme, NAD binding domain LDB30_03615 PF01594 AI-2E family transporter LDB30_03620 PF00920 Dehydratase family LDB30_03630 PF00696 Amino acid kinase family LDB30_03630 PF00583 Acetyltransferase (GNAT) family LDB30_03635 PF01722 BolA-like protein LDB30_03640 PF03795 YCII-related domain LDB30_03645 PF04279 Intracellular septation protein A LDB30_03655 PF00459 Inositol monophosphatase family LDB30_03660 PF00588 SpoU rRNA Methylase family LDB30_03665 PF00132 Bacterial transferase hexapeptide (six repeats) LDB30_03670 PF02082 Transcriptional regulator LDB30_03675 PF00266 Aminotransferase class-V LDB30_03680 PF01592 NifU-like N terminal domain LDB30_03685 PF01521 Iron-sulphur cluster biosynthesis LDB30_03690 PF07743 HSCB C-terminal oligomerisation domain LDB30_03695 PF00012 Hsp70 protein LDB30_03700 PF00111 2Fe-2S iron-sulfur cluster binding domain LDB30_03705 PF04384 Iron-sulphur cluster assembly LDB30_03715 PF01734 Patatin-like phospholipase LDB30_03725 PF04851 Type III restriction enzyme, res subunit LDB30_03725 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LDB30_03725 PF00271 Helicase conserved C-terminal domain LDB30_03725 PF08463 EcoEI R protein C-terminal LDB30_03730 PF02384 N-6 DNA Methylase LDB30_03730 PF12161 HsdM N-terminal domain LDB30_03740 PF01420 Type I restriction modification DNA specificity domain LDB30_03755 PF02634 FdhD/NarQ family LDB30_03765 PF01568 Molydopterin dinucleotide binding domain LDB30_03765 PF00384 Molybdopterin oxidoreductase LDB30_03770 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LDB30_03770 PF01610 Transposase LDB30_03770 PF13542 Helix-turn-helix domain of transposase family ISL3 LDB30_03775 PF00158 Sigma-54 interaction domain LDB30_03775 PF02954 Bacterial regulatory protein, Fis family LDB30_03775 PF01590 GAF domain LDB30_03780 PF04828 Glutathione-dependent formaldehyde-activating enzyme LDB30_03785 PF00107 Zinc-binding dehydrogenase LDB30_03785 PF08240 Alcohol dehydrogenase GroES-like domain LDB30_03790 PF00756 Putative esterase LDB30_03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_03795 PF03466 LysR substrate binding domain LDB30_03800 PF00072 Response regulator receiver domain LDB30_03800 PF02954 Bacterial regulatory protein, Fis family LDB30_03800 PF00158 Sigma-54 interaction domain LDB30_03805 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LDB30_03805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LDB30_03810 PF00374 Nickel-dependent hydrogenase LDB30_03850 PF01106 NifU-like domain LDB30_03860 PF01300 Telomere recombination LDB30_03860 PF07503 HypF finger LDB30_03860 PF00708 Acylphosphatase LDB30_03860 PF17788 HypF Kae1-like domain LDB30_03865 PF01455 HupF/HypC family LDB30_03870 PF13580 SIS domain LDB30_03875 PF01924 Hydrogenase formation hypA family LDB30_03880 PF00586 AIR synthase related protein, N-terminal domain LDB30_03880 PF02769 AIR synthase related protein, C-terminal domain LDB30_03885 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LDB30_03890 PF02492 CobW/HypB/UreG, nucleotide-binding domain LDB30_03900 PF01266 FAD dependent oxidoreductase LDB30_03910 PF00291 Pyridoxal-phosphate dependent enzyme LDB30_03910 PF00585 C-terminal regulatory domain of Threonine dehydratase LDB30_03935 PF01553 Acyltransferase LDB30_03940 PF01208 Uroporphyrinogen decarboxylase (URO-D) LDB30_03945 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LDB30_03945 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_03950 PF01645 Conserved region in glutamate synthase LDB30_03950 PF00310 Glutamine amidotransferases class-II LDB30_03950 PF01493 GXGXG motif LDB30_03950 PF04898 Glutamate synthase central domain LDB30_03955 PF01966 HD domain LDB30_03955 PF13286 Phosphohydrolase-associated domain LDB30_03960 PF02511 Thymidylate synthase complementing protein LDB30_03965 PF01761 3-dehydroquinate synthase LDB30_03970 PF01202 Shikimate kinase LDB30_03975 PF11741 AMIN domain LDB30_03975 PF00263 Bacterial type II and III secretion system protein LDB30_03975 PF07660 Secretin and TonB N terminus short domain LDB30_03975 PF03958 Bacterial type II/III secretion system short domain LDB30_03995 PF11104 Type IV pilus assembly protein PilM; LDB30_04000 PF14437 MafB19-like deaminase LDB30_04005 PF01894 Uncharacterised protein family UPF0047 LDB30_04015 PF01713 Smr domain LDB30_04015 PF00488 MutS domain V LDB30_04020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDB30_04020 PF00205 Thiamine pyrophosphate enzyme, central domain LDB30_04020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDB30_04025 PF10369 Small subunit of acetolactate synthase LDB30_04030 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LDB30_04030 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LDB30_04035 PF02666 Phosphatidylserine decarboxylase LDB30_04040 PF01066 CDP-alcohol phosphatidyltransferase LDB30_04045 PF00224 Pyruvate kinase, barrel domain LDB30_04045 PF02887 Pyruvate kinase, alpha/beta domain LDB30_04050 PF00582 Universal stress protein family LDB30_04055 PF14489 QueF-like protein LDB30_04060 PF06470 SMC proteins Flexible Hinge Domain LDB30_04060 PF02463 RecF/RecN/SMC N terminal domain LDB30_04075 PF01653 NAD-dependent DNA ligase adenylation domain LDB30_04075 PF12826 Helix-hairpin-helix motif LDB30_04075 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LDB30_04075 PF00533 BRCA1 C Terminus (BRCT) domain LDB30_04075 PF03120 NAD-dependent DNA ligase OB-fold domain LDB30_04080 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LDB30_04080 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LDB30_04085 PF08241 Methyltransferase domain LDB30_04095 PF03466 LysR substrate binding domain LDB30_04095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_04105 PF01925 Sulfite exporter TauE/SafE LDB30_04115 PF01618 MotA/TolQ/ExbB proton channel family LDB30_04120 PF02472 Biopolymer transport protein ExbD/TolR LDB30_04135 PF01979 Amidohydrolase family LDB30_04140 PF00962 Adenosine/AMP deaminase LDB30_04150 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LDB30_04150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LDB30_04150 PF00111 2Fe-2S iron-sulfur cluster binding domain LDB30_04150 PF01799 [2Fe-2S] binding domain LDB30_04155 PF00111 2Fe-2S iron-sulfur cluster binding domain LDB30_04155 PF01799 [2Fe-2S] binding domain LDB30_04170 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) LDB30_04175 PF02625 XdhC and CoxI family LDB30_04175 PF13478 XdhC Rossmann domain LDB30_04185 PF01425 Amidase LDB30_04195 PF12804 MobA-like NTP transferase domain LDB30_04210 PF01522 Polysaccharide deacetylase LDB30_04215 PF04820 Tryptophan halogenase LDB30_04235 PF00999 Sodium/hydrogen exchanger family LDB30_04255 PF00109 Beta-ketoacyl synthase, N-terminal domain LDB30_04255 PF02801 Beta-ketoacyl synthase, C-terminal domain LDB30_04280 PF07977 FabA-like domain LDB30_04315 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LDB30_04315 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LDB30_04315 PF01799 [2Fe-2S] binding domain LDB30_04320 PF01799 [2Fe-2S] binding domain LDB30_04320 PF00111 2Fe-2S iron-sulfur cluster binding domain LDB30_04325 PF07690 Major Facilitator Superfamily LDB30_04330 PF00654 Voltage gated chloride channel LDB30_04335 PF00654 Voltage gated chloride channel LDB30_04340 PF01548 Transposase LDB30_04340 PF02371 Transposase IS116/IS110/IS902 family LDB30_04345 PF00654 Voltage gated chloride channel LDB30_04350 PF03466 LysR substrate binding domain LDB30_04350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_04360 PF00689 Cation transporting ATPase, C-terminus LDB30_04360 PF00690 Cation transporter/ATPase, N-terminus LDB30_04395 PF00270 DEAD/DEAH box helicase LDB30_04395 PF13749 Putative ATP-dependent DNA helicase recG C-terminal LDB30_04395 PF17191 RecG wedge domain LDB30_04415 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LDB30_04415 PF18766 SWI2/SNF2 ATPase LDB30_04415 PF11867 Domain of unknown function (DUF3387) LDB30_04430 PF00271 Helicase conserved C-terminal domain LDB30_04430 PF04851 Type III restriction enzyme, res subunit LDB30_04430 PF02151 UvrB/uvrC motif LDB30_04430 PF12344 Ultra-violet resistance protein B LDB30_04430 PF17757 UvrB interaction domain LDB30_04435 PF08240 Alcohol dehydrogenase GroES-like domain LDB30_04435 PF00107 Zinc-binding dehydrogenase LDB30_04440 PF06418 CTP synthase N-terminus LDB30_04440 PF00117 Glutamine amidotransferase class-I LDB30_04445 PF00793 DAHP synthetase I family LDB30_04450 PF03952 Enolase, N-terminal domain LDB30_04450 PF00113 Enolase, C-terminal TIM barrel domain LDB30_04455 PF04977 Septum formation initiator LDB30_04460 PF01132 Elongation factor P (EF-P) OB domain LDB30_04460 PF08207 Elongation factor P (EF-P) KOW-like domain LDB30_04460 PF09285 Elongation factor P, C-terminal LDB30_04470 PF08459 UvrC Helix-hairpin-helix N-terminal LDB30_04470 PF01541 GIY-YIG catalytic domain LDB30_04470 PF02151 UvrB/uvrC motif LDB30_04475 PF01066 CDP-alcohol phosphatidyltransferase LDB30_04490 PF00027 Cyclic nucleotide-binding domain LDB30_04490 PF13545 Crp-like helix-turn-helix domain LDB30_04495 PF04343 Protein of unknown function, DUF488 LDB30_04500 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_04500 PF14759 Reductase C-terminal LDB30_04505 PF00111 2Fe-2S iron-sulfur cluster binding domain LDB30_04505 PF00970 Oxidoreductase FAD-binding domain LDB30_04505 PF00175 Oxidoreductase NAD-binding domain LDB30_04510 PF00175 Oxidoreductase NAD-binding domain LDB30_04510 PF00042 Globin LDB30_04510 PF00970 Oxidoreductase FAD-binding domain LDB30_04515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDB30_04515 PF00529 HlyD membrane-fusion protein of T1SS LDB30_04520 PF02321 Outer membrane efflux protein LDB30_04525 PF07690 Major Facilitator Superfamily LDB30_04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_04530 PF03466 LysR substrate binding domain LDB30_04555 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LDB30_04570 PF00004 ATPase family associated with various cellular activities (AAA) LDB30_04570 PF05362 Lon protease (S16) C-terminal proteolytic domain LDB30_04570 PF02190 ATP-dependent protease La (LON) substrate-binding domain LDB30_04585 PF02567 Phenazine biosynthesis-like protein LDB30_04605 PF00583 Acetyltransferase (GNAT) family LDB30_04615 PF03466 LysR substrate binding domain LDB30_04615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_04640 PF01593 Flavin containing amine oxidoreductase LDB30_04650 PF00155 Aminotransferase class I and II LDB30_04655 PF00589 Phage integrase family LDB30_04660 PF01906 Putative heavy-metal-binding LDB30_04670 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LDB30_04680 PF10672 S-adenosylmethionine-dependent methyltransferase LDB30_04680 PF17785 PUA-like domain LDB30_04685 PF01008 Initiation factor 2 subunit family LDB30_04690 PF03989 DNA gyrase C-terminal domain, beta-propeller LDB30_04690 PF00521 DNA gyrase/topoisomerase IV, subunit A LDB30_04695 PF00266 Aminotransferase class-V LDB30_04700 PF01842 ACT domain LDB30_04700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDB30_04700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDB30_04705 PF00800 Prephenate dehydratase LDB30_04705 PF01817 Chorismate mutase type II LDB30_04705 PF01842 ACT domain LDB30_04710 PF00155 Aminotransferase class I and II LDB30_04715 PF18152 DAHP synthase ferredoxin-like domain LDB30_04715 PF00793 DAHP synthetase I family LDB30_04720 PF01842 ACT domain LDB30_04720 PF02153 Prephenate dehydrogenase LDB30_04725 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDB30_04730 PF02224 Cytidylate kinase LDB30_04735 PF00575 S1 RNA binding domain LDB30_04740 PF00216 Bacterial DNA-binding protein LDB30_04745 PF18073 Rubredoxin metal binding domain LDB30_04750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LDB30_04755 PF00156 Phosphoribosyl transferase domain LDB30_04760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDB30_04760 PF05698 Bacterial trigger factor protein (TF) C-terminus LDB30_04760 PF05697 Bacterial trigger factor protein (TF) LDB30_04765 PF00574 Clp protease LDB30_04770 PF07724 AAA domain (Cdc48 subfamily) LDB30_04770 PF06689 ClpX C4-type zinc finger LDB30_04770 PF10431 C-terminal, D2-small domain, of ClpB protein LDB30_04775 PF00004 ATPase family associated with various cellular activities (AAA) LDB30_04775 PF05362 Lon protease (S16) C-terminal proteolytic domain LDB30_04775 PF02190 ATP-dependent protease La (LON) substrate-binding domain LDB30_04785 PF00216 Bacterial DNA-binding protein LDB30_04800 PF13145 PPIC-type PPIASE domain LDB30_04805 PF01569 PAP2 superfamily LDB30_04825 PF07690 Major Facilitator Superfamily LDB30_04830 PF04356 Protein of unknown function (DUF489) LDB30_04835 PF01909 Nucleotidyltransferase domain LDB30_04835 PF08335 GlnD PII-uridylyltransferase LDB30_04835 PF01842 ACT domain LDB30_04835 PF01966 HD domain LDB30_04840 PF00557 Metallopeptidase family M24 LDB30_04845 PF03749 Sugar fermentation stimulation protein RE domain LDB30_04845 PF17746 SfsA N-terminal OB domain LDB30_04850 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDB30_04855 PF02769 AIR synthase related protein, C-terminal domain LDB30_04855 PF00586 AIR synthase related protein, N-terminal domain LDB30_04860 PF04608 Phosphatidylglycerophosphatase A LDB30_04865 PF02464 Competence-damaged protein LDB30_04865 PF18146 Damage-inducible protein CinA KH domain LDB30_04865 PF00994 Probable molybdopterin binding domain LDB30_04870 PF00154 recA bacterial DNA recombination protein LDB30_04875 PF02631 RecX family LDB30_04880 PF02272 DHHA1 domain LDB30_04880 PF01411 tRNA synthetases class II (A) LDB30_04880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDB30_04910 PF00175 Oxidoreductase NAD-binding domain LDB30_04910 PF00111 2Fe-2S iron-sulfur cluster binding domain LDB30_04910 PF00970 Oxidoreductase FAD-binding domain LDB30_04920 PF01464 Transglycosylase SLT domain LDB30_04920 PF10145 Phage-related minor tail protein LDB30_04920 PF01551 Peptidase family M23 LDB30_04925 PF00271 Helicase conserved C-terminal domain LDB30_04925 PF00176 SNF2 family N-terminal domain LDB30_04925 PF12419 SNF2 Helicase protein LDB30_04930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDB30_04930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDB30_04930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDB30_04930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDB30_04940 PF00005 ABC transporter LDB30_04940 PF12848 ABC transporter LDB30_04945 PF13667 ThiC-associated domain LDB30_04945 PF01964 Radical SAM ThiC family LDB30_04955 PF05199 GMC oxidoreductase LDB30_04955 PF00732 GMC oxidoreductase LDB30_04960 PF00171 Aldehyde dehydrogenase family LDB30_04970 PF02322 Cytochrome bd terminal oxidase subunit II LDB30_04975 PF01654 Cytochrome bd terminal oxidase subunit I LDB30_04985 PF02954 Bacterial regulatory protein, Fis family LDB30_04985 PF00072 Response regulator receiver domain LDB30_04985 PF00158 Sigma-54 interaction domain LDB30_04990 PF02230 Phospholipase/Carboxylesterase LDB30_04995 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_04995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDB30_05000 PF04349 Periplasmic glucan biosynthesis protein, MdoG LDB30_05010 PF00535 Glycosyl transferase family 2 LDB30_05020 PF04241 Protein of unknown function (DUF423) LDB30_05060 PF00482 Type II secretion system (T2SS), protein F LDB30_05065 PF01343 Peptidase family S49 LDB30_05065 PF08496 Peptidase family S49 N-terminal LDB30_05070 PF02597 ThiS family LDB30_05075 PF02391 MoaE protein LDB30_05080 PF04461 Protein of unknown function (DUF520) LDB30_05090 PF01571 Aminomethyltransferase folate-binding domain LDB30_05090 PF08669 Glycine cleavage T-protein C-terminal barrel domain LDB30_05095 PF01597 Glycine cleavage H-protein LDB30_05100 PF02347 Glycine cleavage system P-protein LDB30_05105 PF02347 Glycine cleavage system P-protein LDB30_05110 PF00005 ABC transporter LDB30_05110 PF00664 ABC transporter transmembrane region LDB30_05115 PF11953 Domain of unknown function (DUF3470) LDB30_05115 PF00037 4Fe-4S binding domain LDB30_05120 PF10417 C-terminal domain of 1-Cys peroxiredoxin LDB30_05120 PF00578 AhpC/TSA family LDB30_05130 PF02811 PHP domain LDB30_05135 PF01594 AI-2E family transporter LDB30_05150 PF00588 SpoU rRNA Methylase family LDB30_05150 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDB30_05155 PF01026 TatD related DNase LDB30_05160 PF03099 Biotin/lipoate A/B protein ligase family LDB30_05160 PF12706 Beta-lactamase superfamily domain LDB30_05175 PF00664 ABC transporter transmembrane region LDB30_05175 PF00005 ABC transporter LDB30_05180 PF00664 ABC transporter transmembrane region LDB30_05180 PF00005 ABC transporter LDB30_05190 PF01571 Aminomethyltransferase folate-binding domain LDB30_05200 PF02910 Fumarate reductase flavoprotein C-term LDB30_05200 PF00890 FAD binding domain LDB30_05205 PF08281 Sigma-70, region 4 LDB30_05205 PF04542 Sigma-70 region 2 LDB30_05215 PF13180 PDZ domain LDB30_05220 PF06421 GTP-binding protein LepA C-terminus LDB30_05220 PF03144 Elongation factor Tu domain 2 LDB30_05220 PF00679 Elongation factor G C-terminus LDB30_05220 PF00009 Elongation factor Tu GTP binding domain LDB30_05225 PF10502 Signal peptidase, peptidase S26 LDB30_05235 PF00035 Double-stranded RNA binding motif LDB30_05235 PF14622 Ribonuclease-III-like LDB30_05240 PF07650 KH domain LDB30_05240 PF01926 50S ribosome-binding GTPase LDB30_05245 PF02565 Recombination protein O C terminal LDB30_05245 PF11967 Recombination protein O N terminal LDB30_05250 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LDB30_05255 PF01648 4'-phosphopantetheinyl transferase superfamily LDB30_05260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LDB30_05260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LDB30_05260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LDB30_05265 PF01467 Cytidylyltransferase-like LDB30_05265 PF00294 pfkB family carbohydrate kinase LDB30_05270 PF01171 PP-loop family LDB30_05275 PF01430 Hsp33 protein LDB30_05285 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system LDB30_05335 PF13439 Glycosyltransferase Family 4 LDB30_05335 PF00534 Glycosyl transferases group 1 LDB30_05340 PF00534 Glycosyl transferases group 1 LDB30_05340 PF13439 Glycosyltransferase Family 4 LDB30_05350 PF00034 Cytochrome c LDB30_05355 PF01545 Cation efflux family LDB30_05370 PF00270 DEAD/DEAH box helicase LDB30_05370 PF00271 Helicase conserved C-terminal domain LDB30_05375 PF00072 Response regulator receiver domain LDB30_05375 PF00486 Transcriptional regulatory protein, C terminal LDB30_05380 PF11808 Phosphate regulon sensor protein PhoR LDB30_05380 PF00512 His Kinase A (phospho-acceptor) domain LDB30_05380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_05380 PF00989 PAS fold LDB30_05385 PF12849 PBP superfamily domain LDB30_05390 PF00528 Binding-protein-dependent transport system inner membrane component LDB30_05395 PF00528 Binding-protein-dependent transport system inner membrane component LDB30_05400 PF00005 ABC transporter LDB30_05405 PF01895 PhoU domain LDB30_05410 PF02541 Ppx/GppA phosphatase family LDB30_05420 PF00318 Ribosomal protein S2 LDB30_05425 PF00889 Elongation factor TS LDB30_05430 PF00696 Amino acid kinase family LDB30_05435 PF01765 Ribosome recycling factor LDB30_05440 PF01255 Putative undecaprenyl diphosphate synthase LDB30_05450 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LDB30_05450 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LDB30_05450 PF13288 DXP reductoisomerase C-terminal domain LDB30_05455 PF17820 PDZ domain LDB30_05455 PF02163 Peptidase family M50 LDB30_05460 PF07244 Surface antigen variable number repeat LDB30_05460 PF01103 Surface antigen LDB30_05470 PF00132 Bacterial transferase hexapeptide (six repeats) LDB30_05470 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LDB30_05475 PF07977 FabA-like domain LDB30_05480 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LDB30_05480 PF00132 Bacterial transferase hexapeptide (six repeats) LDB30_05485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LDB30_05485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LDB30_05490 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LDB30_05495 PF02684 Lipid-A-disaccharide synthetase LDB30_05500 PF01351 Ribonuclease HII LDB30_05505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDB30_05505 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDB30_05505 PF01336 OB-fold nucleic acid binding domain LDB30_05505 PF02811 PHP domain LDB30_05505 PF14579 Helix-hairpin-helix motif LDB30_05510 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LDB30_05515 PF01171 PP-loop family LDB30_05515 PF09179 TilS substrate binding domain LDB30_05515 PF11734 TilS substrate C-terminal domain LDB30_05520 PF01979 Amidohydrolase family LDB30_05525 PF01258 Prokaryotic dksA/traR C4-type zinc finger LDB30_05530 PF13419 Haloacid dehalogenase-like hydrolase LDB30_05540 PF00578 AhpC/TSA family LDB30_05545 PF02562 PhoH-like protein LDB30_05545 PF13638 PIN domain LDB30_05550 PF17810 Arginine decarboxylase helical bundle domain LDB30_05550 PF17944 Arginine decarboxylase C-terminal helical extension LDB30_05550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LDB30_05560 PF01557 Fumarylacetoacetate (FAA) hydrolase family LDB30_05590 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_05595 PF00766 Electron transfer flavoprotein FAD-binding domain LDB30_05595 PF01012 Electron transfer flavoprotein domain LDB30_05600 PF01012 Electron transfer flavoprotein domain LDB30_05605 PF01152 Bacterial-like globin LDB30_05620 PF01618 MotA/TolQ/ExbB proton channel family LDB30_05625 PF02472 Biopolymer transport protein ExbD/TolR LDB30_05645 PF01497 Periplasmic binding protein LDB30_05650 PF01032 FecCD transport family LDB30_05655 PF00005 ABC transporter LDB30_05675 PF01032 FecCD transport family LDB30_05710 PF00581 Rhodanese-like domain LDB30_05720 PF03206 Nitrogen fixation protein NifW LDB30_05725 PF00132 Bacterial transferase hexapeptide (six repeats) LDB30_05730 PF00682 HMGL-like LDB30_05735 PF00266 Aminotransferase class-V LDB30_05740 PF04324 BFD-like [2Fe-2S] binding domain LDB30_05740 PF01106 NifU-like domain LDB30_05740 PF01592 NifU-like N terminal domain LDB30_05745 PF01521 Iron-sulphur cluster biosynthesis LDB30_05755 PF04891 NifQ LDB30_05760 PF12838 4Fe-4S dicluster domain LDB30_05765 PF05082 Rop-like LDB30_05770 PF03270 Protein of unknown function, DUF269 LDB30_05775 PF02579 Dinitrogenase iron-molybdenum cofactor LDB30_05780 PF00148 Nitrogenase component 1 type Oxidoreductase LDB30_05785 PF04324 BFD-like [2Fe-2S] binding domain LDB30_05785 PF00148 Nitrogenase component 1 type Oxidoreductase LDB30_05795 PF00111 2Fe-2S iron-sulfur cluster binding domain LDB30_05800 PF11844 Domain of unknown function (DUF3364) LDB30_05800 PF00148 Nitrogenase component 1 type Oxidoreductase LDB30_05805 PF00148 Nitrogenase component 1 type Oxidoreductase LDB30_05810 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family LDB30_05820 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) LDB30_05825 PF03747 ADP-ribosylglycohydrolase LDB30_05830 PF01590 GAF domain LDB30_05830 PF02954 Bacterial regulatory protein, Fis family LDB30_05830 PF00158 Sigma-54 interaction domain LDB30_05835 PF02579 Dinitrogenase iron-molybdenum cofactor LDB30_05835 PF04055 Radical SAM superfamily LDB30_05840 PF00037 4Fe-4S binding domain LDB30_05845 PF01521 Iron-sulphur cluster biosynthesis LDB30_05860 PF01816 Leucine rich repeat variant LDB30_05860 PF05484 LRV protein FeS4 cluster LDB30_05865 PF04319 NifZ domain LDB30_05875 PF00266 Aminotransferase class-V LDB30_05880 PF06988 NifT/FixU protein LDB30_05890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LDB30_05895 PF00111 2Fe-2S iron-sulfur cluster binding domain LDB30_05910 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LDB30_05910 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LDB30_05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_05915 PF03459 TOBE domain LDB30_05920 PF00171 Aldehyde dehydrogenase family LDB30_05940 PF00294 pfkB family carbohydrate kinase LDB30_05945 PF00862 Sucrose synthase LDB30_05945 PF00534 Glycosyl transferases group 1 LDB30_05950 PF00534 Glycosyl transferases group 1 LDB30_05950 PF00862 Sucrose synthase LDB30_05955 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LDB30_05955 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDB30_06115 PF13091 PLD-like domain LDB30_06120 PF17768 RecJ OB domain LDB30_06120 PF02272 DHHA1 domain LDB30_06120 PF01368 DHH family LDB30_06125 PF01252 Signal peptidase (SPase) II LDB30_06145 PF18152 DAHP synthase ferredoxin-like domain LDB30_06145 PF00793 DAHP synthetase I family LDB30_06155 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LDB30_06180 PF01047 MarR family LDB30_06210 PF03358 NADPH-dependent FMN reductase LDB30_06215 PF00892 EamA-like transporter family LDB30_06220 PF11583 P-aminobenzoate N-oxygenase AurF LDB30_06225 PF00117 Glutamine amidotransferase class-I LDB30_06230 PF04715 Anthranilate synthase component I, N terminal region LDB30_06230 PF00425 chorismate binding enzyme LDB30_06235 PF01022 Bacterial regulatory protein, arsR family LDB30_06240 PF00665 Integrase core domain LDB30_06240 PF13936 Helix-turn-helix domain LDB30_06290 PF13361 UvrD-like helicase C-terminal domain LDB30_06290 PF00580 UvrD/REP helicase N-terminal domain LDB30_06295 PF00271 Helicase conserved C-terminal domain LDB30_06295 PF04851 Type III restriction enzyme, res subunit LDB30_06335 PF08346 AntA/AntB antirepressor LDB30_06335 PF10548 P22AR C-terminal domain LDB30_06365 PF01435 Peptidase family M48 LDB30_06480 PF00589 Phage integrase family LDB30_06480 PF02899 Phage integrase, N-terminal SAM-like domain LDB30_06485 PF00589 Phage integrase family LDB30_06490 PF00589 Phage integrase family LDB30_06490 PF02899 Phage integrase, N-terminal SAM-like domain LDB30_06560 PF00149 Calcineurin-like phosphoesterase LDB30_06630 PF13538 UvrD-like helicase C-terminal domain LDB30_06630 PF14490 Helix-hairpin-helix containing domain LDB30_06630 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LDB30_06655 PF00437 Type II/IV secretion system protein LDB30_06690 PF00216 Bacterial DNA-binding protein LDB30_06700 PF01381 Helix-turn-helix LDB30_06700 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system LDB30_06745 PF00072 Response regulator receiver domain LDB30_06745 PF00486 Transcriptional regulatory protein, C terminal LDB30_06750 PF02702 Osmosensitive K+ channel His kinase sensor domain LDB30_06750 PF00512 His Kinase A (phospho-acceptor) domain LDB30_06750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_06750 PF13493 Domain of unknown function (DUF4118) LDB30_06750 PF13492 GAF domain LDB30_06760 PF03814 Potassium-transporting ATPase A subunit LDB30_06770 PF02669 K+-transporting ATPase, c chain LDB30_06790 PF01472 PUA domain LDB30_06790 PF00696 Amino acid kinase family LDB30_06800 PF00543 Nitrogen regulatory protein P-II LDB30_06820 PF13520 Amino acid permease LDB30_06825 PF00999 Sodium/hydrogen exchanger family LDB30_06830 PF02308 MgtC family LDB30_06880 PF00216 Bacterial DNA-binding protein LDB30_06900 PF18019 HD domain LDB30_06920 PF09615 CRISPR-associated protein (Cas_Csy3) LDB30_06930 PF01867 CRISPR associated protein Cas1 LDB30_06935 PF00488 MutS domain V LDB30_06935 PF01624 MutS domain I LDB30_06935 PF05188 MutS domain II LDB30_06935 PF05192 MutS domain III LDB30_06935 PF05190 MutS family domain IV LDB30_06950 PF13439 Glycosyltransferase Family 4 LDB30_06950 PF00534 Glycosyl transferases group 1 LDB30_06955 PF01027 Inhibitor of apoptosis-promoting Bax1 LDB30_06975 PF02913 FAD linked oxidases, C-terminal domain LDB30_06975 PF01565 FAD binding domain LDB30_06980 PF02569 Pantoate-beta-alanine ligase LDB30_06985 PF02548 Ketopantoate hydroxymethyltransferase LDB30_06990 PF01712 Deoxynucleoside kinase LDB30_06995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LDB30_07000 PF00571 CBS domain LDB30_07000 PF01368 DHH family LDB30_07000 PF02272 DHHA1 domain LDB30_07000 PF01743 Poly A polymerase head domain LDB30_07000 PF12627 Probable RNA and SrmB- binding site of polymerase A LDB30_07005 PF01743 Poly A polymerase head domain LDB30_07005 PF12626 Polymerase A arginine-rich C-terminus LDB30_07005 PF12627 Probable RNA and SrmB- binding site of polymerase A LDB30_07010 PF00535 Glycosyl transferase family 2 LDB30_07015 PF00571 CBS domain LDB30_07015 PF00478 IMP dehydrogenase / GMP reductase domain LDB30_07020 PF02540 NAD synthase LDB30_07020 PF00958 GMP synthase C terminal domain LDB30_07020 PF00117 Glutamine amidotransferase class-I LDB30_07030 PF01850 PIN domain LDB30_07045 PF13520 Amino acid permease LDB30_07050 PF01472 PUA domain LDB30_07050 PF00696 Amino acid kinase family LDB30_07055 PF12795 Mechanosensitive ion channel porin domain LDB30_07055 PF00924 Mechanosensitive ion channel LDB30_07055 PF12794 Mechanosensitive ion channel inner membrane domain 1 LDB30_07070 PF01300 Telomere recombination LDB30_07075 PF02163 Peptidase family M50 LDB30_07080 PF00579 tRNA synthetases class I (W and Y) LDB30_07085 PF02616 Segregation and condensation protein ScpA LDB30_07090 PF04079 Segregation and condensation complex subunit ScpB LDB30_07095 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_07100 PF00849 RNA pseudouridylate synthase LDB30_07100 PF01479 S4 domain LDB30_07120 PF07690 Major Facilitator Superfamily LDB30_07130 PF11897 Protein of unknown function (DUF3417) LDB30_07130 PF00343 Carbohydrate phosphorylase LDB30_07135 PF03952 Enolase, N-terminal domain LDB30_07135 PF00113 Enolase, C-terminal TIM barrel domain LDB30_07140 PF00391 PEP-utilising enzyme, mobile domain LDB30_07140 PF00224 Pyruvate kinase, barrel domain LDB30_07140 PF02887 Pyruvate kinase, alpha/beta domain LDB30_07150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDB30_07150 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_07160 PF00294 pfkB family carbohydrate kinase LDB30_07165 PF01515 Phosphate acetyl/butaryl transferase LDB30_07170 PF00083 Sugar (and other) transporter LDB30_07175 PF00871 Acetokinase family LDB30_07180 PF02817 e3 binding domain LDB30_07180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LDB30_07180 PF00364 Biotin-requiring enzyme LDB30_07185 PF02779 Transketolase, pyrimidine binding domain LDB30_07185 PF02780 Transketolase, C-terminal domain LDB30_07190 PF00676 Dehydrogenase E1 component LDB30_07200 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LDB30_07200 PF01676 Metalloenzyme superfamily LDB30_07205 PF00391 PEP-utilising enzyme, mobile domain LDB30_07205 PF02896 PEP-utilising enzyme, TIM barrel domain LDB30_07205 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LDB30_07215 PF03330 Lytic transglycolase LDB30_07215 PF05036 Sporulation related domain LDB30_07220 PF07687 Peptidase dimerisation domain LDB30_07220 PF01546 Peptidase family M20/M25/M40 LDB30_07225 PF00132 Bacterial transferase hexapeptide (six repeats) LDB30_07225 PF14602 Hexapeptide repeat of succinyl-transferase LDB30_07225 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LDB30_07230 PF00155 Aminotransferase class I and II LDB30_07240 PF13419 Haloacid dehalogenase-like hydrolase LDB30_07250 PF01979 Amidohydrolase family LDB30_07260 PF01476 LysM domain LDB30_07260 PF00877 NlpC/P60 family LDB30_07285 PF00140 Sigma-70 factor, region 1.2 LDB30_07285 PF04542 Sigma-70 region 2 LDB30_07285 PF04539 Sigma-70 region 3 LDB30_07285 PF04545 Sigma-70, region 4 LDB30_07320 PF02779 Transketolase, pyrimidine binding domain LDB30_07320 PF02780 Transketolase, C-terminal domain LDB30_07320 PF00456 Transketolase, thiamine diphosphate binding domain LDB30_07340 PF03595 Voltage-dependent anion channel LDB30_07345 PF00730 HhH-GPD superfamily base excision DNA repair protein LDB30_07345 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain LDB30_07355 PF00535 Glycosyl transferase family 2 LDB30_07380 PF05199 GMC oxidoreductase LDB30_07380 PF00732 GMC oxidoreductase LDB30_07400 PF01329 Pterin 4 alpha carbinolamine dehydratase LDB30_07430 PF01726 LexA DNA binding domain LDB30_07430 PF00717 Peptidase S24-like LDB30_07445 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDB30_07445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDB30_07445 PF14579 Helix-hairpin-helix motif LDB30_07445 PF02811 PHP domain LDB30_07445 PF01336 OB-fold nucleic acid binding domain LDB30_07455 PF11940 Domain of unknown function (DUF3458) Ig-like fold LDB30_07455 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LDB30_07455 PF01433 Peptidase family M1 domain LDB30_07470 PF02503 Polyphosphate kinase middle domain LDB30_07470 PF13090 Polyphosphate kinase C-terminal domain 2 LDB30_07470 PF17941 Polyphosphate kinase C-terminal domain 1 LDB30_07470 PF13089 Polyphosphate kinase N-terminal domain LDB30_07475 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LDB30_07475 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LDB30_07480 PF00873 AcrB/AcrD/AcrF family LDB30_07485 PF13533 Biotin-lipoyl like LDB30_07490 PF02321 Outer membrane efflux protein LDB30_07500 PF02545 Maf-like protein LDB30_07505 PF00311 Phosphoenolpyruvate carboxylase LDB30_07510 PF17209 Hfq protein LDB30_07515 PF16360 GTP-binding GTPase Middle Region LDB30_07515 PF13167 GTP-binding GTPase N-terminal LDB30_07515 PF01926 50S ribosome-binding GTPase LDB30_07520 PF01145 SPFH domain / Band 7 family LDB30_07525 PF01145 SPFH domain / Band 7 family LDB30_07530 PF13393 Histidyl-tRNA synthetase LDB30_07535 PF00709 Adenylosuccinate synthetase LDB30_07545 PF00773 RNB domain LDB30_07545 PF17876 Cold shock domain LDB30_07545 PF08206 Ribonuclease B OB domain LDB30_07545 PF08461 Ribonuclease R winged-helix domain LDB30_07550 PF03976 Polyphosphate kinase 2 (PPK2) LDB30_07555 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_07555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDB30_07560 PF00994 Probable molybdopterin binding domain LDB30_07560 PF02464 Competence-damaged protein LDB30_07565 PF02371 Transposase IS116/IS110/IS902 family LDB30_07565 PF01548 Transposase LDB30_07570 PF00551 Formyl transferase LDB30_07575 PF00586 AIR synthase related protein, N-terminal domain LDB30_07575 PF02769 AIR synthase related protein, C-terminal domain LDB30_07580 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LDB30_07580 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LDB30_07585 PF01066 CDP-alcohol phosphatidyltransferase LDB30_07590 PF02371 Transposase IS116/IS110/IS902 family LDB30_07590 PF01548 Transposase LDB30_07595 PF00551 Formyl transferase LDB30_07600 PF02769 AIR synthase related protein, C-terminal domain LDB30_07600 PF00586 AIR synthase related protein, N-terminal domain LDB30_07605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LDB30_07605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LDB30_07610 PF01066 CDP-alcohol phosphatidyltransferase LDB30_07615 PF08299 Bacterial dnaA protein helix-turn-helix LDB30_07615 PF00308 Bacterial dnaA protein LDB30_07615 PF11638 DnaA N-terminal domain LDB30_07620 PF03631 Virulence factor BrkB LDB30_07630 PF01783 Ribosomal L32p protein family LDB30_07635 PF02504 Fatty acid synthesis protein LDB30_07640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LDB30_07640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LDB30_07645 PF00698 Acyl transferase domain LDB30_07655 PF00550 Phosphopantetheine attachment site LDB30_07660 PF00109 Beta-ketoacyl synthase, N-terminal domain LDB30_07660 PF02801 Beta-ketoacyl synthase, C-terminal domain LDB30_07670 PF02618 YceG-like family LDB30_07675 PF02223 Thymidylate kinase LDB30_07680 PF09115 DNA polymerase III, delta subunit, C terminal LDB30_07700 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LDB30_07700 PF12170 DNA polymerase III tau subunit V interacting with alpha LDB30_07700 PF12169 DNA polymerase III subunits gamma and tau domain III LDB30_07705 PF02575 YbaB/EbfC DNA-binding family LDB30_07710 PF02132 RecR protein LDB30_07710 PF13662 Toprim domain LDB30_07715 PF00909 Ammonium Transporter Family LDB30_07720 PF01256 Carbohydrate kinase LDB30_07720 PF03853 YjeF-related protein N-terminus LDB30_07725 PF00202 Aminotransferase class-III LDB30_07735 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LDB30_07740 PF08676 MutL C terminal dimerisation domain LDB30_07740 PF01119 DNA mismatch repair protein, C-terminal domain LDB30_07750 PF00334 Nucleoside diphosphate kinase LDB30_07755 PF04055 Radical SAM superfamily LDB30_07765 PF13464 Domain of unknown function (DUF4115) LDB30_07770 PF04551 GcpE protein LDB30_07775 PF03129 Anticodon binding domain LDB30_07775 PF13393 Histidyl-tRNA synthetase LDB30_07790 PF01926 50S ribosome-binding GTPase LDB30_07790 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LDB30_07800 PF12849 PBP superfamily domain LDB30_07805 PF00528 Binding-protein-dependent transport system inner membrane component LDB30_07810 PF00528 Binding-protein-dependent transport system inner membrane component LDB30_07825 PF01925 Sulfite exporter TauE/SafE LDB30_07835 PF00873 AcrB/AcrD/AcrF family LDB30_07840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDB30_07855 PF01161 Phosphatidylethanolamine-binding protein LDB30_07865 PF11953 Domain of unknown function (DUF3470) LDB30_07865 PF00037 4Fe-4S binding domain LDB30_07930 PF04185 Phosphoesterase family LDB30_07950 PF00004 ATPase family associated with various cellular activities (AAA) LDB30_07985 PF17841 BID domain of Bartonella effector protein (Bep) LDB30_07985 PF03389 MobA/MobL family LDB30_07985 PF01443 Viral (Superfamily 1) RNA helicase LDB30_08000 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB LDB30_08005 PF01381 Helix-turn-helix LDB30_08065 PF01266 FAD dependent oxidoreductase LDB30_08075 PF01103 Surface antigen LDB30_08075 PF07244 Surface antigen variable number repeat LDB30_08075 PF17243 POTRA domain TamA domain 1 LDB30_08095 PF00034 Cytochrome c LDB30_08115 PF01370 NAD dependent epimerase/dehydratase family LDB30_08120 PF01370 NAD dependent epimerase/dehydratase family LDB30_08125 PF00999 Sodium/hydrogen exchanger family LDB30_08125 PF02080 TrkA-C domain LDB30_08125 PF02254 TrkA-N domain LDB30_08130 PF13193 AMP-binding enzyme C-terminal domain LDB30_08130 PF00501 AMP-binding enzyme LDB30_08130 PF16177 Acetyl-coenzyme A synthetase N-terminus LDB30_08135 PF00004 ATPase family associated with various cellular activities (AAA) LDB30_08135 PF07724 AAA domain (Cdc48 subfamily) LDB30_08135 PF02861 Clp amino terminal domain, pathogenicity island component LDB30_08135 PF10431 C-terminal, D2-small domain, of ClpB protein LDB30_08135 PF17871 AAA lid domain LDB30_08145 PF01264 Chorismate synthase LDB30_08150 PF02649 Type I GTP cyclohydrolase folE2 LDB30_08155 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LDB30_08155 PF02779 Transketolase, pyrimidine binding domain LDB30_08155 PF02780 Transketolase, C-terminal domain LDB30_08160 PF00348 Polyprenyl synthetase LDB30_08165 PF02609 Exonuclease VII small subunit LDB30_08170 PF07690 Major Facilitator Superfamily LDB30_08180 PF00085 Thioredoxin LDB30_08185 PF02601 Exonuclease VII, large subunit LDB30_08185 PF13742 OB-fold nucleic acid binding domain LDB30_08190 PF13360 PQQ-like domain LDB30_08190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LDB30_08190 PF01011 PQQ enzyme repeat LDB30_08205 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LDB30_08210 PF00149 Calcineurin-like phosphoesterase LDB30_08215 PF00689 Cation transporting ATPase, C-terminus LDB30_08215 PF00690 Cation transporter/ATPase, N-terminus LDB30_08220 PF00682 HMGL-like LDB30_08220 PF08502 LeuA allosteric (dimerisation) domain LDB30_08225 PF01037 Lrp/AsnC ligand binding domain LDB30_08240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_08240 PF03466 LysR substrate binding domain LDB30_08245 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LDB30_08250 PF03472 Autoinducer binding domain LDB30_08250 PF00196 Bacterial regulatory proteins, luxR family LDB30_08260 PF00765 Autoinducer synthase LDB30_08270 PF01878 EVE domain LDB30_08280 PF00005 ABC transporter LDB30_08290 PF01965 DJ-1/PfpI family LDB30_08320 PF17074 Darcynin, domain of unknown function LDB30_08325 PF01047 MarR family LDB30_08330 PF02627 Carboxymuconolactone decarboxylase family LDB30_08335 PF00583 Acetyltransferase (GNAT) family LDB30_08365 PF00403 Heavy-metal-associated domain LDB30_08370 PF00155 Aminotransferase class I and II LDB30_08375 PF02222 ATP-grasp domain LDB30_08375 PF01370 NAD dependent epimerase/dehydratase family LDB30_08380 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LDB30_08380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDB30_08385 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LDB30_08385 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LDB30_08390 PF01022 Bacterial regulatory protein, arsR family LDB30_08395 PF01207 Dihydrouridine synthase (Dus) LDB30_08400 PF00521 DNA gyrase/topoisomerase IV, subunit A LDB30_08405 PF01751 Toprim domain LDB30_08405 PF00986 DNA gyrase B subunit, carboxyl terminus LDB30_08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_08405 PF00204 DNA gyrase B LDB30_08410 PF08521 Two-component sensor kinase N-terminal LDB30_08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_08410 PF00512 His Kinase A (phospho-acceptor) domain LDB30_08415 PF00072 Response regulator receiver domain LDB30_08415 PF00486 Transcriptional regulatory protein, C terminal LDB30_08430 PF00873 AcrB/AcrD/AcrF family LDB30_08455 PF00873 AcrB/AcrD/AcrF family LDB30_08495 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LDB30_08495 PF09363 XFP C-terminal domain LDB30_08495 PF09364 XFP N-terminal domain LDB30_08510 PF07549 SecD/SecF GG Motif LDB30_08510 PF02355 Protein export membrane protein LDB30_08515 PF13721 SecD export protein N-terminal TM region LDB30_08515 PF02355 Protein export membrane protein LDB30_08515 PF07549 SecD/SecF GG Motif LDB30_08520 PF02699 Preprotein translocase subunit LDB30_08525 PF01702 Queuine tRNA-ribosyltransferase LDB30_08530 PF02547 Queuosine biosynthesis protein LDB30_08535 PF03471 Transporter associated domain LDB30_08535 PF01595 Cyclin M transmembrane N-terminal domain LDB30_08535 PF00571 CBS domain LDB30_08545 PF01053 Cys/Met metabolism PLP-dependent enzyme LDB30_08550 PF13537 Glutamine amidotransferase domain LDB30_08550 PF00156 Phosphoribosyl transferase domain LDB30_08560 PF02875 Mur ligase family, glutamate ligase domain LDB30_08560 PF08245 Mur ligase middle domain LDB30_08565 PF01039 Carboxyl transferase domain LDB30_08565 PF17848 Acetyl-coA carboxylase zinc finger domain LDB30_08570 PF00290 Tryptophan synthase alpha chain LDB30_08575 PF00291 Pyridoxal-phosphate dependent enzyme LDB30_08580 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LDB30_08585 PF01416 tRNA pseudouridine synthase LDB30_08595 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDB30_08595 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDB30_08600 PF00180 Isocitrate/isopropylmalate dehydrogenase LDB30_08605 PF12804 MobA-like NTP transferase domain LDB30_08610 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LDB30_08615 PF00994 Probable molybdopterin binding domain LDB30_08615 PF03454 MoeA C-terminal region (domain IV) LDB30_08615 PF03453 MoeA N-terminal region (domain I and II) LDB30_08620 PF13091 PLD-like domain LDB30_08625 PF01343 Peptidase family S49 LDB30_08630 PF00128 Alpha amylase, catalytic domain LDB30_08635 PF00128 Alpha amylase, catalytic domain LDB30_08635 PF11941 Domain of unknown function (DUF3459) LDB30_08640 PF00534 Glycosyl transferases group 1 LDB30_08650 PF01738 Dienelactone hydrolase family LDB30_08650 PF00156 Phosphoribosyl transferase domain LDB30_08655 PF00011 Hsp20/alpha crystallin family LDB30_08660 PF08240 Alcohol dehydrogenase GroES-like domain LDB30_08670 PF01435 Peptidase family M48 LDB30_08675 PF07690 Major Facilitator Superfamily LDB30_08735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDB30_08740 PF00873 AcrB/AcrD/AcrF family LDB30_08745 PF00005 ABC transporter LDB30_08765 PF02637 GatB domain LDB30_08765 PF02934 GatB/GatE catalytic domain LDB30_08770 PF01425 Amidase LDB30_08775 PF02686 Glu-tRNAGln amidotransferase C subunit LDB30_08790 PF06463 Molybdenum Cofactor Synthesis C LDB30_08790 PF04055 Radical SAM superfamily LDB30_08810 PF04794 YdjC-like protein LDB30_08825 PF01370 NAD dependent epimerase/dehydratase family LDB30_08830 PF01048 Phosphorylase superfamily LDB30_08835 PF13243 Squalene-hopene cyclase C-terminal domain LDB30_08835 PF13249 Squalene-hopene cyclase N-terminal domain LDB30_08845 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LDB30_08845 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LDB30_08850 PF02556 Preprotein translocase subunit SecB LDB30_08860 PF01850 PIN domain LDB30_08870 PF00171 Aldehyde dehydrogenase family LDB30_08875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDB30_08875 PF04073 Aminoacyl-tRNA editing domain LDB30_08875 PF03129 Anticodon binding domain LDB30_08880 PF00582 Universal stress protein family LDB30_08910 PF13277 YmdB-like protein LDB30_08915 PF01812 5-formyltetrahydrofolate cyclo-ligase family LDB30_08935 PF03717 Penicillin-binding Protein dimerisation domain LDB30_08935 PF00905 Penicillin binding protein transpeptidase domain LDB30_08940 PF14693 Ribosomal protein TL5, C-terminal domain LDB30_08940 PF01386 Ribosomal L25p family LDB30_08945 PF01195 Peptidyl-tRNA hydrolase LDB30_08950 PF01926 50S ribosome-binding GTPase LDB30_08950 PF06071 Protein of unknown function (DUF933) LDB30_08955 PF07883 Cupin domain LDB30_08955 PF01381 Helix-turn-helix LDB30_08960 PF00361 Proton-conducting membrane transporter LDB30_08965 PF00146 NADH dehydrogenase LDB30_08975 PF00361 Proton-conducting membrane transporter LDB30_08980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LDB30_08980 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LDB30_08980 PF00374 Nickel-dependent hydrogenase LDB30_08985 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LDB30_08990 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LDB30_08990 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LDB30_08995 PF07728 AAA domain (dynein-related subfamily) LDB30_08995 PF08406 CbbQ/NirQ/NorQ C-terminal LDB30_09000 PF00092 von Willebrand factor type A domain LDB30_09005 PF03466 LysR substrate binding domain LDB30_09005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_09010 PF03831 PhnA domain LDB30_09010 PF08274 PhnA Zinc-Ribbon LDB30_09040 PF00664 ABC transporter transmembrane region LDB30_09040 PF00005 ABC transporter LDB30_09040 PF03412 Peptidase C39 family LDB30_09050 PF14883 Hypothetical glycosyl hydrolase family 13 LDB30_09050 PF01522 Polysaccharide deacetylase LDB30_09060 PF00144 Beta-lactamase LDB30_09065 PF00293 NUDIX domain LDB30_09070 PF00293 NUDIX domain LDB30_09075 PF00849 RNA pseudouridylate synthase LDB30_09075 PF01479 S4 domain LDB30_09080 PF04371 Porphyromonas-type peptidyl-arginine deiminase LDB30_09085 PF00384 Molybdopterin oxidoreductase LDB30_09085 PF01568 Molydopterin dinucleotide binding domain LDB30_09085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDB30_09090 PF13247 4Fe-4S dicluster domain LDB30_09110 PF00582 Universal stress protein family LDB30_09115 PF07690 Major Facilitator Superfamily LDB30_09125 PF01790 Prolipoprotein diacylglyceryl transferase LDB30_09130 PF00580 UvrD/REP helicase N-terminal domain LDB30_09130 PF13361 UvrD-like helicase C-terminal domain LDB30_09135 PF01649 Ribosomal protein S20 LDB30_09140 PF00005 ABC transporter LDB30_09140 PF08402 TOBE domain LDB30_09145 PF00528 Binding-protein-dependent transport system inner membrane component LDB30_09155 PF00149 Calcineurin-like phosphoesterase LDB30_09160 PF00270 DEAD/DEAH box helicase LDB30_09160 PF00271 Helicase conserved C-terminal domain LDB30_09160 PF00570 HRDC domain LDB30_09160 PF16124 RecQ zinc-binding LDB30_09160 PF09382 RQC domain LDB30_09165 PF01491 Frataxin-like domain LDB30_09185 PF03739 Lipopolysaccharide export system permease LptF/LptG LDB30_09190 PF00883 Cytosol aminopeptidase family, catalytic domain LDB30_09190 PF02789 Cytosol aminopeptidase family, N-terminal domain LDB30_09205 PF10458 Valyl tRNA synthetase tRNA binding arm LDB30_09205 PF08264 Anticodon-binding domain of tRNA LDB30_09205 PF00133 tRNA synthetases class I (I, L, M and V) LDB30_09210 PF06965 Na+/H+ antiporter 1 LDB30_09215 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LDB30_09215 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LDB30_09225 PF16925 Tetracyclin repressor-like, C-terminal domain LDB30_09225 PF00440 Bacterial regulatory proteins, tetR family LDB30_09230 PF01738 Dienelactone hydrolase family LDB30_09235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDB30_09250 PF05656 Protein of unknown function (DUF805) LDB30_09270 PF13419 Haloacid dehalogenase-like hydrolase LDB30_09275 PF01479 S4 domain LDB30_09275 PF00849 RNA pseudouridylate synthase LDB30_09280 PF12111 Polyribonucleotide phosphorylase C terminal LDB30_09280 PF00575 S1 RNA binding domain LDB30_09280 PF10150 Ribonuclease E/G family LDB30_09285 PF09190 DALR domain LDB30_09285 PF01406 tRNA synthetases class I (C) catalytic domain LDB30_09290 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDB30_09295 PF00905 Penicillin binding protein transpeptidase domain LDB30_09295 PF00912 Transglycosylase LDB30_09295 PF17092 Penicillin-binding protein OB-like domain LDB30_09300 PF00723 Glycosyl hydrolases family 15 LDB30_09300 PF09137 Glucodextranase, domain N LDB30_09325 PF00486 Transcriptional regulatory protein, C terminal LDB30_09325 PF00072 Response regulator receiver domain LDB30_09330 PF02702 Osmosensitive K+ channel His kinase sensor domain LDB30_09330 PF00512 His Kinase A (phospho-acceptor) domain LDB30_09330 PF13493 Domain of unknown function (DUF4118) LDB30_09330 PF13492 GAF domain LDB30_09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_09340 PF03814 Potassium-transporting ATPase A subunit LDB30_09350 PF02669 K+-transporting ATPase, c chain LDB30_09360 PF01472 PUA domain LDB30_09360 PF00696 Amino acid kinase family LDB30_09370 PF00543 Nitrogen regulatory protein P-II LDB30_09380 PF00999 Sodium/hydrogen exchanger family LDB30_09405 PF00207 Alpha-2-macroglobulin family LDB30_09405 PF07703 Alpha-2-macroglobulin bait region domain LDB30_09405 PF01835 MG2 domain LDB30_09405 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LDB30_09405 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LDB30_09405 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LDB30_09405 PF17962 Bacterial macroglobulin domain 6 LDB30_09410 PF06832 Penicillin-Binding Protein C-terminus Family LDB30_09410 PF00905 Penicillin binding protein transpeptidase domain LDB30_09410 PF00912 Transglycosylase LDB30_09430 PF01925 Sulfite exporter TauE/SafE LDB30_09440 PF01808 AICARFT/IMPCHase bienzyme LDB30_09440 PF02142 MGS-like domain LDB30_09445 PF02844 Phosphoribosylglycinamide synthetase, N domain LDB30_09445 PF02843 Phosphoribosylglycinamide synthetase, C domain LDB30_09445 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LDB30_09450 PF01300 Telomere recombination LDB30_09455 PF01218 Coproporphyrinogen III oxidase LDB30_09460 PF01180 Dihydroorotate dehydrogenase LDB30_09475 PF04185 Phosphoesterase family LDB30_09485 PF02472 Biopolymer transport protein ExbD/TolR LDB30_09490 PF01618 MotA/TolQ/ExbB proton channel family LDB30_09510 PF01618 MotA/TolQ/ExbB proton channel family LDB30_09530 PF00083 Sugar (and other) transporter LDB30_09535 PF06754 Phosphonate metabolism protein PhnG LDB30_09540 PF05845 Bacterial phosphonate metabolism protein (PhnH) LDB30_09545 PF05861 Bacterial phosphonate metabolism protein (PhnI) LDB30_09550 PF06007 Phosphonate metabolism protein PhnJ LDB30_09555 PF00005 ABC transporter LDB30_09560 PF00005 ABC transporter LDB30_09565 PF07969 Amidohydrolase family LDB30_09575 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LDB30_09575 PF00591 Glycosyl transferase family, a/b domain LDB30_09580 PF00392 Bacterial regulatory proteins, gntR family LDB30_09580 PF07702 UTRA domain LDB30_09595 PF05506 Domain of unknown function (DUF756) LDB30_09595 PF04185 Phosphoesterase family LDB30_09605 PF00005 ABC transporter LDB30_09620 PF04185 Phosphoesterase family LDB30_09620 PF05506 Domain of unknown function (DUF756) LDB30_09630 PF01618 MotA/TolQ/ExbB proton channel family LDB30_09645 PF00593 TonB dependent receptor LDB30_09645 PF07715 TonB-dependent Receptor Plug Domain LDB30_09685 PF00083 Sugar (and other) transporter LDB30_09695 PF00300 Histidine phosphatase superfamily (branch 1) LDB30_09710 PF00512 His Kinase A (phospho-acceptor) domain LDB30_09710 PF00672 HAMP domain LDB30_09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_09715 PF00486 Transcriptional regulatory protein, C terminal LDB30_09715 PF00072 Response regulator receiver domain LDB30_09720 PF00929 Exonuclease LDB30_09725 PF00296 Luciferase-like monooxygenase LDB30_09740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDB30_09740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDB30_09740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDB30_09740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDB30_09755 PF00689 Cation transporting ATPase, C-terminus LDB30_09755 PF00690 Cation transporter/ATPase, N-terminus LDB30_09760 PF01292 Prokaryotic cytochrome b561 LDB30_09770 PF07690 Major Facilitator Superfamily LDB30_09775 PF03466 LysR substrate binding domain LDB30_09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_09780 PF02195 ParB-like nuclease domain LDB30_09780 PF17762 HTH domain found in ParB protein LDB30_09785 PF13614 AAA domain LDB30_09795 PF03743 Bacterial conjugation TrbI-like protein LDB30_09800 PF03524 Conjugal transfer protein LDB30_09815 PF00437 Type II/IV secretion system protein LDB30_09830 PF01850 PIN domain LDB30_09840 PF00476 DNA polymerase family A LDB30_09840 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDB30_09840 PF01367 5'-3' exonuclease, C-terminal SAM fold LDB30_09875 PF11799 impB/mucB/samB family C-terminal domain LDB30_09875 PF00817 impB/mucB/samB family LDB30_09880 PF02371 Transposase IS116/IS110/IS902 family LDB30_09880 PF01548 Transposase LDB30_09890 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LDB30_09895 PF00872 Transposase, Mutator family LDB30_09910 PF11799 impB/mucB/samB family C-terminal domain LDB30_09910 PF00817 impB/mucB/samB family LDB30_09950 PF01751 Toprim domain LDB30_09950 PF01131 DNA topoisomerase LDB30_09955 PF01751 Toprim domain LDB30_09955 PF01131 DNA topoisomerase LDB30_09990 PF09281 Taq polymerase, exonuclease LDB30_09990 PF00476 DNA polymerase family A LDB30_09990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDB30_09990 PF01367 5'-3' exonuclease, C-terminal SAM fold LDB30_09995 PF00436 Single-strand binding protein family LDB30_10015 PF00145 C-5 cytosine-specific DNA methylase LDB30_10020 PF09015 NgoMIV restriction enzyme LDB30_10050 PF00082 Subtilase family LDB30_10055 PF00004 ATPase family associated with various cellular activities (AAA) LDB30_10095 PF08401 Domain of unknown function (DUF1738) LDB30_10095 PF18818 Metallopeptidase superfamily domain LDB30_10140 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LDB30_10195 PF02534 Type IV secretory system Conjugative DNA transfer LDB30_10200 PF00795 Carbon-nitrogen hydrolase LDB30_10210 PF00145 C-5 cytosine-specific DNA methylase LDB30_10225 PF03852 DNA mismatch endonuclease Vsr LDB30_10240 PF06527 TniQ LDB30_10240 PF15978 Tn7-like transposition protein D LDB30_10245 PF13401 AAA domain LDB30_10245 PF11426 Tn7 transposition regulator TnsC LDB30_10260 PF00543 Nitrogen regulatory protein P-II LDB30_10265 PF00990 Diguanylate cyclase, GGDEF domain LDB30_10265 PF03707 Bacterial signalling protein N terminal repeat LDB30_10265 PF00563 EAL domain LDB30_10315 PF10544 T5orf172 domain LDB30_10325 PF13749 Putative ATP-dependent DNA helicase recG C-terminal LDB30_10325 PF17191 RecG wedge domain LDB30_10325 PF00270 DEAD/DEAH box helicase LDB30_10345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LDB30_10365 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LDB30_10365 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LDB30_10370 PF00665 Integrase core domain LDB30_10375 PF08722 TnsA endonuclease N terminal LDB30_10375 PF08721 TnsA endonuclease C terminal LDB30_10390 PF00589 Phage integrase family LDB30_10400 PF03979 Sigma-70 factor, region 1.1 LDB30_10400 PF04545 Sigma-70, region 4 LDB30_10400 PF00140 Sigma-70 factor, region 1.2 LDB30_10400 PF04542 Sigma-70 region 2 LDB30_10400 PF04539 Sigma-70 region 3 LDB30_10400 PF04546 Sigma-70, non-essential region LDB30_10405 PF08278 DNA primase DnaG DnaB-binding LDB30_10405 PF08275 DNA primase catalytic core, N-terminal domain LDB30_10405 PF01807 CHC2 zinc finger LDB30_10405 PF10410 DnaB-helicase binding domain of primase LDB30_10410 PF00488 MutS domain V LDB30_10410 PF01713 Smr domain LDB30_10420 PF01165 Ribosomal protein S21 LDB30_10425 PF04539 Sigma-70 region 3 LDB30_10425 PF04542 Sigma-70 region 2 LDB30_10425 PF00140 Sigma-70 factor, region 1.2 LDB30_10425 PF04545 Sigma-70, region 4 LDB30_10430 PF01725 Ham1 family LDB30_10435 PF03725 3' exoribonuclease family, domain 2 LDB30_10435 PF01138 3' exoribonuclease family, domain 1 LDB30_10450 PF04055 Radical SAM superfamily LDB30_10450 PF06969 HemN C-terminal domain LDB30_10460 PF00849 RNA pseudouridylate synthase LDB30_10460 PF01479 S4 domain LDB30_10470 PF07690 Major Facilitator Superfamily LDB30_10475 PF07943 Penicillin-binding protein 5, C-terminal domain LDB30_10475 PF00768 D-alanyl-D-alanine carboxypeptidase LDB30_10495 PF02769 AIR synthase related protein, C-terminal domain LDB30_10495 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LDB30_10495 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LDB30_10500 PF01259 SAICAR synthetase LDB30_10505 PF10397 Adenylosuccinate lyase C-terminus LDB30_10505 PF00206 Lyase LDB30_10515 PF00701 Dihydrodipicolinate synthetase family LDB30_10525 PF03006 Haemolysin-III related LDB30_10530 PF01520 N-acetylmuramoyl-L-alanine amidase LDB30_10530 PF11741 AMIN domain LDB30_10535 PF00085 Thioredoxin LDB30_10540 PF00462 Glutaredoxin LDB30_10545 PF00581 Rhodanese-like domain LDB30_10555 PF00873 AcrB/AcrD/AcrF family LDB30_10560 PF13533 Biotin-lipoyl like LDB30_10570 PF01022 Bacterial regulatory protein, arsR family LDB30_10580 PF12161 HsdM N-terminal domain LDB30_10580 PF02384 N-6 DNA Methylase LDB30_10620 PF12008 Type I restriction and modification enzyme - subunit R C terminal LDB30_10620 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LDB30_10620 PF18766 SWI2/SNF2 ATPase LDB30_10625 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LDB30_10640 PF00899 ThiF family LDB30_10650 PF01494 FAD binding domain LDB30_10655 PF01494 FAD binding domain LDB30_10660 PF04380 Membrane fusogenic activity LDB30_10680 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LDB30_10700 PF02899 Phage integrase, N-terminal SAM-like domain LDB30_10700 PF00589 Phage integrase family LDB30_10705 PF02899 Phage integrase, N-terminal SAM-like domain LDB30_10705 PF00589 Phage integrase family LDB30_10760 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LDB30_10760 PF01610 Transposase LDB30_10760 PF13542 Helix-turn-helix domain of transposase family ISL3 LDB30_10770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LDB30_10775 PF00391 PEP-utilising enzyme, mobile domain LDB30_10775 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LDB30_10780 PF01695 IstB-like ATP binding protein LDB30_10810 PF00140 Sigma-70 factor, region 1.2 LDB30_10810 PF04542 Sigma-70 region 2 LDB30_10810 PF04539 Sigma-70 region 3 LDB30_10810 PF04545 Sigma-70, region 4 LDB30_10835 PF00891 O-methyltransferase domain LDB30_10840 PF00109 Beta-ketoacyl synthase, N-terminal domain LDB30_10840 PF02801 Beta-ketoacyl synthase, C-terminal domain LDB30_10850 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LDB30_10850 PF13542 Helix-turn-helix domain of transposase family ISL3 LDB30_10850 PF01610 Transposase LDB30_10860 PF00563 EAL domain LDB30_10860 PF08448 PAS fold LDB30_10860 PF08447 PAS fold LDB30_10860 PF00990 Diguanylate cyclase, GGDEF domain LDB30_10865 PF03707 Bacterial signalling protein N terminal repeat LDB30_10865 PF00990 Diguanylate cyclase, GGDEF domain LDB30_10865 PF00563 EAL domain LDB30_10885 PF01047 MarR family LDB30_10895 PF04264 YceI-like domain LDB30_10925 PF00216 Bacterial DNA-binding protein LDB30_10930 PF00216 Bacterial DNA-binding protein LDB30_10940 PF00216 Bacterial DNA-binding protein LDB30_10945 PF01906 Putative heavy-metal-binding LDB30_10950 PF00083 Sugar (and other) transporter LDB30_10965 PF01618 MotA/TolQ/ExbB proton channel family LDB30_10970 PF02472 Biopolymer transport protein ExbD/TolR LDB30_10995 PF04972 BON domain LDB30_10995 PF00691 OmpA family LDB30_11020 PF02374 Anion-transporting ATPase LDB30_11025 PF06953 Arsenical resistance operon trans-acting repressor ArsD LDB30_11030 PF01451 Low molecular weight phosphotyrosine protein phosphatase LDB30_11040 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_11040 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LDB30_11040 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LDB30_11045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDB30_11050 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LDB30_11050 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LDB30_11055 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LDB30_11065 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LDB30_11065 PF09363 XFP C-terminal domain LDB30_11065 PF09364 XFP N-terminal domain LDB30_11085 PF07929 Plasmid pRiA4b ORF-3-like protein LDB30_11100 PF01027 Inhibitor of apoptosis-promoting Bax1 LDB30_11105 PF01638 HxlR-like helix-turn-helix LDB30_11110 PF02798 Glutathione S-transferase, N-terminal domain LDB30_11110 PF00043 Glutathione S-transferase, C-terminal domain LDB30_11120 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_11120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDB30_11175 PF01545 Cation efflux family LDB30_11180 PF13411 MerR HTH family regulatory protein LDB30_11185 PF08241 Methyltransferase domain LDB30_11190 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LDB30_11190 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LDB30_11225 PF00873 AcrB/AcrD/AcrF family LDB30_11295 PF00403 Heavy-metal-associated domain LDB30_11305 PF00034 Cytochrome c LDB30_11315 PF00999 Sodium/hydrogen exchanger family LDB30_11320 PF13520 Amino acid permease LDB30_11340 PF00543 Nitrogen regulatory protein P-II LDB30_11350 PF00696 Amino acid kinase family LDB30_11350 PF01472 PUA domain LDB30_11355 PF08443 RimK-like ATP-grasp domain LDB30_11355 PF18030 RimK PreATP-grasp domain LDB30_11355 PF02080 TrkA-C domain LDB30_11360 PF00583 Acetyltransferase (GNAT) family LDB30_11375 PF03050 Transposase IS66 family LDB30_11375 PF13817 IS66 C-terminal element LDB30_11375 PF13005 zinc-finger binding domain of transposase IS66 LDB30_11375 PF13007 Transposase C of IS166 homeodomain LDB30_11400 PF02669 K+-transporting ATPase, c chain LDB30_11410 PF03814 Potassium-transporting ATPase A subunit LDB30_11420 PF03814 Potassium-transporting ATPase A subunit LDB30_11425 PF05052 MerE protein LDB30_11430 PF03203 MerC mercury resistance protein LDB30_11435 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_11435 PF00403 Heavy-metal-associated domain LDB30_11435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDB30_11440 PF00723 Glycosyl hydrolases family 15 LDB30_11440 PF09137 Glucodextranase, domain N LDB30_11540 PF00665 Integrase core domain LDB30_11550 PF13335 Magnesium chelatase, subunit ChlI C-terminal LDB30_11550 PF01078 Magnesium chelatase, subunit ChlI LDB30_11560 PF13411 MerR HTH family regulatory protein LDB30_11570 PF03144 Elongation factor Tu domain 2 LDB30_11570 PF16658 Class II release factor RF3, C-terminal domain LDB30_11570 PF00009 Elongation factor Tu GTP binding domain LDB30_11580 PF00814 Glycoprotease family LDB30_11585 PF13307 Helicase C-terminal domain LDB30_11585 PF04851 Type III restriction enzyme, res subunit LDB30_11595 PF00877 NlpC/P60 family LDB30_11610 PF07664 Ferrous iron transport protein B C terminus LDB30_11610 PF17910 FeoB cytosolic helical domain LDB30_11610 PF02421 Ferrous iron transport protein B LDB30_11610 PF07670 Nucleoside recognition LDB30_11620 PF00795 Carbon-nitrogen hydrolase LDB30_11625 PF07722 Peptidase C26 LDB30_11630 PF09335 SNARE associated Golgi protein LDB30_11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB30_11645 PF03466 LysR substrate binding domain LDB30_11660 PF00850 Histone deacetylase domain LDB30_11670 PF07728 AAA domain (dynein-related subfamily) LDB30_11670 PF08406 CbbQ/NirQ/NorQ C-terminal LDB30_11715 PF03099 Biotin/lipoate A/B protein ligase family LDB30_11725 PF01597 Glycine cleavage H-protein LDB30_11735 PF01597 Glycine cleavage H-protein LDB30_11740 PF02754 Cysteine-rich domain LDB30_11755 PF01593 Flavin containing amine oxidoreductase LDB30_11770 PF13686 DsrE/DsrF/DrsH-like family LDB30_11775 PF01206 Sulfurtransferase TusA LDB30_11780 PF00581 Rhodanese-like domain LDB30_11785 PF06463 Molybdenum Cofactor Synthesis C LDB30_11785 PF04055 Radical SAM superfamily LDB30_11795 PF01967 MoaC family LDB30_11805 PF04085 rod shape-determining protein MreC LDB30_11815 PF00905 Penicillin binding protein transpeptidase domain LDB30_11815 PF03717 Penicillin-binding Protein dimerisation domain LDB30_11820 PF01098 Cell cycle protein LDB30_11825 PF07943 Penicillin-binding protein 5, C-terminal domain LDB30_11825 PF00768 D-alanyl-D-alanine carboxypeptidase LDB30_11835 PF03099 Biotin/lipoate A/B protein ligase family LDB30_11840 PF04055 Radical SAM superfamily LDB30_11840 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LDB30_11885 PF02091 Glycyl-tRNA synthetase alpha subunit LDB30_11890 PF02092 Glycyl-tRNA synthetase beta subunit LDB30_11905 PF08443 RimK-like ATP-grasp domain LDB30_11905 PF18030 RimK PreATP-grasp domain LDB30_11925 PF02677 Epoxyqueuosine reductase QueH LDB30_11935 PF01510 N-acetylmuramoyl-L-alanine amidase LDB30_11955 PF02798 Glutathione S-transferase, N-terminal domain LDB30_11955 PF00043 Glutathione S-transferase, C-terminal domain LDB30_11960 PF01638 HxlR-like helix-turn-helix LDB30_11965 PF00682 HMGL-like LDB30_11965 PF08502 LeuA allosteric (dimerisation) domain LDB30_11970 PF01590 GAF domain LDB30_11970 PF02954 Bacterial regulatory protein, Fis family LDB30_11970 PF00158 Sigma-54 interaction domain LDB30_12005 PF13732 Domain of unknown function (DUF4162) LDB30_12005 PF00005 ABC transporter LDB30_12025 PF00216 Bacterial DNA-binding protein LDB30_12030 PF03483 B3/4 domain LDB30_12030 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LDB30_12030 PF03484 tRNA synthetase B5 domain LDB30_12030 PF03147 Ferredoxin-fold anticodon binding domain LDB30_12030 PF01588 Putative tRNA binding domain LDB30_12035 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LDB30_12035 PF01409 tRNA synthetases class II core domain (F) LDB30_12040 PF00453 Ribosomal protein L20 LDB30_12045 PF01632 Ribosomal protein L35 LDB30_12050 PF05198 Translation initiation factor IF-3, N-terminal domain LDB30_12050 PF00707 Translation initiation factor IF-3, C-terminal domain LDB30_12055 PF02824 TGS domain LDB30_12055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDB30_12055 PF03129 Anticodon binding domain LDB30_12055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDB30_12065 PF00361 Proton-conducting membrane transporter LDB30_12070 PF00361 Proton-conducting membrane transporter LDB30_12070 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LDB30_12075 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LDB30_12075 PF00361 Proton-conducting membrane transporter LDB30_12080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LDB30_12085 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LDB30_12090 PF12838 4Fe-4S dicluster domain LDB30_12095 PF00146 NADH dehydrogenase LDB30_12100 PF00384 Molybdopterin oxidoreductase LDB30_12100 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LDB30_12100 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LDB30_12105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LDB30_12105 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LDB30_12105 PF10531 SLBB domain LDB30_12115 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LDB30_12120 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LDB30_12125 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LDB30_12130 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LDB30_12140 PF03840 Preprotein translocase SecG subunit LDB30_12145 PF00121 Triosephosphate isomerase LDB30_12150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDB30_12150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDB30_12150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDB30_12150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDB30_12155 PF00809 Pterin binding enzyme LDB30_12160 PF06480 FtsH Extracellular LDB30_12160 PF01434 Peptidase family M41 LDB30_12160 PF00004 ATPase family associated with various cellular activities (AAA) LDB30_12160 PF17862 AAA+ lid domain LDB30_12165 PF01523 Putative modulator of DNA gyrase LDB30_12170 PF00317 Ribonucleotide reductase, all-alpha domain LDB30_12170 PF02867 Ribonucleotide reductase, barrel domain LDB30_12170 PF03477 ATP cone domain LDB30_12175 PF00268 Ribonucleotide reductase, small chain LDB30_12195 PF07690 Major Facilitator Superfamily LDB30_12240 PF05425 Copper resistance protein D LDB30_12240 PF13115 YtkA-like LDB30_12240 PF04234 CopC domain LDB30_12250 PF11799 impB/mucB/samB family C-terminal domain LDB30_12250 PF00817 impB/mucB/samB family LDB30_12255 PF01850 PIN domain LDB30_12280 PF00692 dUTPase LDB30_12285 PF10609 NUBPL iron-transfer P-loop NTPase LDB30_12295 PF05173 Dihydrodipicolinate reductase, C-terminus LDB30_12295 PF01113 Dihydrodipicolinate reductase, N-terminus LDB30_12300 PF00684 DnaJ central domain LDB30_12300 PF01556 DnaJ C terminal domain LDB30_12300 PF00226 DnaJ domain LDB30_12305 PF00012 Hsp70 protein LDB30_12310 PF01025 GrpE LDB30_12315 PF01628 HrcA protein C terminal domain LDB30_12320 PF00471 Ribosomal protein L33 LDB30_12325 PF00830 Ribosomal L28 family LDB30_12330 PF01588 Putative tRNA binding domain LDB30_12330 PF09334 tRNA synthetases class I (M) LDB30_12335 PF00793 DAHP synthetase I family LDB30_12335 PF18152 DAHP synthase ferredoxin-like domain LDB30_12340 PF10415 Fumarase C C-terminus LDB30_12340 PF00206 Lyase LDB30_12345 PF08439 Oligopeptidase F LDB30_12345 PF01432 Peptidase family M3 LDB30_12365 PF00534 Glycosyl transferases group 1 LDB30_12365 PF08323 Starch synthase catalytic domain LDB30_12370 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LDB30_12370 PF10996 Beta-Casp domain LDB30_12370 PF00753 Metallo-beta-lactamase superfamily LDB30_12380 PF10576 Iron-sulfur binding domain of endonuclease III LDB30_12380 PF00633 Helix-hairpin-helix motif LDB30_12380 PF00730 HhH-GPD superfamily base excision DNA repair protein LDB30_12390 PF03895 YadA-like membrane anchor domain LDB30_12390 PF05658 Head domain of trimeric autotransporter adhesin LDB30_12390 PF05662 Coiled stalk of trimeric autotransporter adhesin LDB30_12390 PF13018 Extended Signal Peptide of Type V secretion system LDB30_12395 PF04972 BON domain LDB30_12395 PF00691 OmpA family LDB30_12425 PF13533 Biotin-lipoyl like LDB30_12430 PF00664 ABC transporter transmembrane region LDB30_12430 PF00005 ABC transporter LDB30_12430 PF03412 Peptidase C39 family LDB30_12440 PF02954 Bacterial regulatory protein, Fis family LDB30_12440 PF00072 Response regulator receiver domain LDB30_12440 PF00158 Sigma-54 interaction domain LDB30_12470 PF00437 Type II/IV secretion system protein LDB30_12480 PF04972 BON domain LDB30_12480 PF00263 Bacterial type II and III secretion system protein LDB30_12480 PF13629 Pilus formation protein N terminal region LDB30_12530 PF13181 Tetratricopeptide repeat LDB30_12560 PF01136 Peptidase family U32 LDB30_12565 PF01136 Peptidase family U32 LDB30_12570 PF02036 SCP-2 sterol transfer family LDB30_12585 PF00034 Cytochrome c LDB30_12595 PF00355 Rieske [2Fe-2S] domain LDB30_12595 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LDB30_12600 PF00032 Cytochrome b(C-terminal)/b6/petD LDB30_12600 PF00033 Cytochrome b/b6/petB LDB30_12605 PF02167 Cytochrome C1 family LDB30_12630 PF01728 FtsJ-like methyltransferase LDB30_12635 PF01985 CRS1 / YhbY (CRM) domain LDB30_12640 PF04379 ApaG domain LDB30_12645 PF01209 ubiE/COQ5 methyltransferase family LDB30_12650 PF03144 Elongation factor Tu domain 2 LDB30_12650 PF00009 Elongation factor Tu GTP binding domain LDB30_12650 PF00679 Elongation factor G C-terminus LDB30_12665 PF01678 Diaminopimelate epimerase LDB30_12680 PF02899 Phage integrase, N-terminal SAM-like domain LDB30_12680 PF00589 Phage integrase family LDB30_12685 PF00227 Proteasome subunit LDB30_12690 PF00004 ATPase family associated with various cellular activities (AAA) LDB30_12690 PF07724 AAA domain (Cdc48 subfamily) LDB30_12700 PF00140 Sigma-70 factor, region 1.2 LDB30_12700 PF04542 Sigma-70 region 2 LDB30_12700 PF04545 Sigma-70, region 4 LDB30_12705 PF18075 FtsX extracellular domain LDB30_12710 PF00005 ABC transporter LDB30_12715 PF02881 SRP54-type protein, helical bundle domain LDB30_12715 PF00448 SRP54-type protein, GTPase domain LDB30_12725 PF01467 Cytidylyltransferase-like LDB30_12730 PF00037 4Fe-4S binding domain LDB30_12735 PF00350 Dynamin family LDB30_12740 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LDB30_12740 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LDB30_12740 PF06827 Zinc finger found in FPG and IleRS LDB30_12745 PF05175 Methyltransferase small domain LDB30_12745 PF17827 PrmC N-terminal domain LDB30_12750 PF00472 RF-1 domain LDB30_12750 PF03462 PCRF domain LDB30_12755 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LDB30_12755 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LDB30_12755 PF01488 Shikimate / quinate 5-dehydrogenase LDB30_12765 PF03550 Outer membrane lipoprotein LolB LDB30_12770 PF00288 GHMP kinases N terminal domain LDB30_12770 PF08544 GHMP kinases C terminal LDB30_12780 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LDB30_12780 PF14572 Phosphoribosyl synthetase-associated domain LDB30_12805 PF01925 Sulfite exporter TauE/SafE LDB30_12810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDB30_12810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDB30_12810 PF00205 Thiamine pyrophosphate enzyme, central domain LDB30_12865 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LDB30_12870 PF04221 RelB antitoxin LDB30_12890 PF01906 Putative heavy-metal-binding LDB30_12900 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LDB30_12900 PF18766 SWI2/SNF2 ATPase LDB30_12900 PF11867 Domain of unknown function (DUF3387) LDB30_12910 PF01420 Type I restriction modification DNA specificity domain LDB30_12955 PF02384 N-6 DNA Methylase LDB30_12975 PF00557 Metallopeptidase family M24 LDB30_12975 PF05195 Aminopeptidase P, N-terminal domain LDB30_12985 PF18073 Rubredoxin metal binding domain LDB30_12990 PF00842 Alanine racemase, C-terminal domain LDB30_12990 PF01168 Alanine racemase, N-terminal domain LDB30_12995 PF00772 DnaB-like helicase N terminal domain LDB30_12995 PF03796 DnaB-like helicase C terminal domain LDB30_13000 PF03948 Ribosomal protein L9, C-terminal domain LDB30_13000 PF01281 Ribosomal protein L9, N-terminal domain LDB30_13010 PF01084 Ribosomal protein S18 LDB30_13015 PF01250 Ribosomal protein S6 LDB30_13020 PF00933 Glycosyl hydrolase family 3 N terminal domain LDB30_13025 PF13520 Amino acid permease LDB30_13035 PF01938 TRAM domain LDB30_13035 PF05958 tRNA (Uracil-5-)-methyltransferase LDB30_13055 PF00291 Pyridoxal-phosphate dependent enzyme LDB30_13060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LDB30_13065 PF01145 SPFH domain / Band 7 family LDB30_13075 PF00128 Alpha amylase, catalytic domain LDB30_13075 PF02806 Alpha amylase, C-terminal all-beta domain LDB30_13075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LDB30_13080 PF00483 Nucleotidyl transferase LDB30_13090 PF09094 Domain of unknown function (DUF1925) LDB30_13090 PF03065 Glycosyl hydrolase family 57 LDB30_13090 PF09095 Domain of unknown function (DUF1926) LDB30_13095 PF00480 ROK family LDB30_13100 PF01177 Asp/Glu/Hydantoin racemase LDB30_13105 PF04286 Protein of unknown function (DUF445) LDB30_13135 PF02384 N-6 DNA Methylase LDB30_13135 PF12161 HsdM N-terminal domain LDB30_13140 PF00436 Single-strand binding protein family LDB30_13145 PF17755 UvrA DNA-binding domain LDB30_13145 PF17760 UvrA interaction domain LDB30_13155 PF00085 Thioredoxin LDB30_13160 PF13180 PDZ domain LDB30_13165 PF02899 Phage integrase, N-terminal SAM-like domain LDB30_13165 PF00589 Phage integrase family LDB30_13175 PF01245 Ribosomal protein L19 LDB30_13180 PF01746 tRNA (Guanine-1)-methyltransferase LDB30_13185 PF01782 RimM N-terminal domain LDB30_13185 PF05239 PRC-barrel domain LDB30_13190 PF00886 Ribosomal protein S16 LDB30_13195 PF02881 SRP54-type protein, helical bundle domain LDB30_13195 PF00448 SRP54-type protein, GTPase domain LDB30_13195 PF02978 Signal peptide binding domain LDB30_13200 PF03358 NADPH-dependent FMN reductase LDB30_13205 PF02040 Arsenical pump membrane protein LDB30_13215 PF01451 Low molecular weight phosphotyrosine protein phosphatase LDB30_13225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDB30_13230 PF00005 ABC transporter LDB30_13265 PF01597 Glycine cleavage H-protein LDB30_13295 PF00691 OmpA family LDB30_13295 PF00223 Photosystem I psaA/psaB protein LDB30_13335 PF00263 Bacterial type II and III secretion system protein LDB30_13335 PF03958 Bacterial type II/III secretion system short domain LDB30_13340 PF00437 Type II/IV secretion system protein LDB30_13365 PF03167 Uracil DNA glycosylase superfamily LDB30_13380 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LDB30_13395 PF12848 ABC transporter LDB30_13395 PF16326 ABC transporter C-terminal domain LDB30_13395 PF00005 ABC transporter LDB30_13410 PF03717 Penicillin-binding Protein dimerisation domain LDB30_13410 PF00905 Penicillin binding protein transpeptidase domain LDB30_13425 PF00348 Polyprenyl synthetase LDB30_13435 PF02954 Bacterial regulatory protein, Fis family LDB30_13435 PF00072 Response regulator receiver domain LDB30_13435 PF00158 Sigma-54 interaction domain LDB30_13440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_13440 PF00512 His Kinase A (phospho-acceptor) domain LDB30_13440 PF00989 PAS fold LDB30_13450 PF14403 Circularly permuted ATP-grasp type 2 LDB30_13455 PF04168 A predicted alpha-helical domain with a conserved ER motif. LDB30_13455 PF14403 Circularly permuted ATP-grasp type 2 LDB30_13470 PF08298 PrkA AAA domain LDB30_13470 PF06798 PrkA serine protein kinase C-terminal domain LDB30_13475 PF00909 Ammonium Transporter Family LDB30_13480 PF04285 Protein of unknown function (DUF444) LDB30_13485 PF04293 SpoVR like protein LDB30_13495 PF00543 Nitrogen regulatory protein P-II LDB30_13500 PF00909 Ammonium Transporter Family LDB30_13505 PF00117 Glutamine amidotransferase class-I LDB30_13505 PF00958 GMP synthase C terminal domain LDB30_13520 PF03330 Lytic transglycolase LDB30_13520 PF05036 Sporulation related domain LDB30_13530 PF07885 Ion channel LDB30_13530 PF02254 TrkA-N domain LDB30_13535 PF07943 Penicillin-binding protein 5, C-terminal domain LDB30_13535 PF00768 D-alanyl-D-alanine carboxypeptidase LDB30_13540 PF00342 Phosphoglucose isomerase LDB30_13560 PF00361 Proton-conducting membrane transporter LDB30_13560 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LDB30_13565 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LDB30_13565 PF00374 Nickel-dependent hydrogenase LDB30_13565 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LDB30_13570 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LDB30_13575 PF00361 Proton-conducting membrane transporter LDB30_13580 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LDB30_13605 PF06736 Protein of unknown function (DUF1211) LDB30_13610 PF17946 RecC C-terminal domain LDB30_13615 PF12705 PD-(D/E)XK nuclease superfamily LDB30_13615 PF00580 UvrD/REP helicase N-terminal domain LDB30_13615 PF13361 UvrD-like helicase C-terminal domain LDB30_13620 PF13538 UvrD-like helicase C-terminal domain LDB30_13650 PF00689 Cation transporting ATPase, C-terminus LDB30_13650 PF00690 Cation transporter/ATPase, N-terminus LDB30_13655 PF01641 SelR domain LDB30_13660 PF01625 Peptide methionine sulfoxide reductase LDB30_13670 PF01467 Cytidylyltransferase-like LDB30_13680 PF02590 Predicted SPOUT methyltransferase LDB30_13695 PF02545 Maf-like protein LDB30_13700 PF10150 Ribonuclease E/G family LDB30_13700 PF00575 S1 RNA binding domain LDB30_13705 PF00072 Response regulator receiver domain LDB30_13705 PF00158 Sigma-54 interaction domain LDB30_13715 PF00512 His Kinase A (phospho-acceptor) domain LDB30_13715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_13725 PF04362 Bacterial Fe(2+) trafficking LDB30_13730 PF01050 Mannose-6-phosphate isomerase LDB30_13730 PF00483 Nucleotidyl transferase LDB30_13740 PF01061 ABC-2 type transporter LDB30_13745 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LDB30_13745 PF01610 Transposase LDB30_13745 PF13542 Helix-turn-helix domain of transposase family ISL3 LDB30_13755 PF00005 ABC transporter LDB30_13765 PF13439 Glycosyltransferase Family 4 LDB30_13765 PF00534 Glycosyl transferases group 1 LDB30_13780 PF01507 Phosphoadenosine phosphosulfate reductase family LDB30_13785 PF00009 Elongation factor Tu GTP binding domain LDB30_13790 PF00459 Inositol monophosphatase family LDB30_13800 PF02563 Polysaccharide biosynthesis/export protein LDB30_13805 PF00534 Glycosyl transferases group 1 LDB30_13805 PF13439 Glycosyltransferase Family 4 LDB30_13815 PF16363 GDP-mannose 4,6 dehydratase LDB30_13820 PF08241 Methyltransferase domain LDB30_13880 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LDB30_13895 PF00698 Acyl transferase domain LDB30_13895 PF16197 Ketoacyl-synthetase C-terminal extension LDB30_13895 PF00109 Beta-ketoacyl synthase, N-terminal domain LDB30_13895 PF02801 Beta-ketoacyl synthase, C-terminal domain LDB30_13895 PF08659 KR domain LDB30_13895 PF00550 Phosphopantetheine attachment site LDB30_13895 PF14765 Polyketide synthase dehydratase LDB30_13895 PF08240 Alcohol dehydrogenase GroES-like domain LDB30_13895 PF00107 Zinc-binding dehydrogenase LDB30_13900 PF00155 Aminotransferase class I and II LDB30_13905 PF05159 Capsule polysaccharide biosynthesis protein LDB30_13910 PF05159 Capsule polysaccharide biosynthesis protein LDB30_13915 PF00106 short chain dehydrogenase LDB30_13925 PF10576 Iron-sulfur binding domain of endonuclease III LDB30_13925 PF00633 Helix-hairpin-helix motif LDB30_13925 PF00730 HhH-GPD superfamily base excision DNA repair protein LDB30_13925 PF14815 NUDIX domain LDB30_13935 PF05524 PEP-utilising enzyme, N-terminal LDB30_13935 PF00391 PEP-utilising enzyme, mobile domain LDB30_13935 PF02896 PEP-utilising enzyme, TIM barrel domain LDB30_13940 PF00381 PTS HPr component phosphorylation site LDB30_13950 PF03668 P-loop ATPase protein family LDB30_13955 PF07475 HPr Serine kinase C-terminal domain LDB30_13955 PF02603 HPr Serine kinase N terminus LDB30_13960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDB30_13960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDB30_13965 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LDB30_13970 PF04963 Sigma-54 factor, core binding domain LDB30_13970 PF00309 Sigma-54 factor, Activator interacting domain (AID) LDB30_13970 PF04552 Sigma-54, DNA binding domain LDB30_13975 PF00005 ABC transporter LDB30_13980 PF03968 OstA-like protein LDB30_13995 PF00571 CBS domain LDB30_13995 PF01380 SIS domain LDB30_14010 PF00483 Nucleotidyl transferase LDB30_14015 PF01636 Phosphotransferase enzyme family LDB30_14020 PF03968 OstA-like protein LDB30_14020 PF04453 LPS transport system D LDB30_14025 PF09312 SurA N-terminal domain LDB30_14025 PF00639 PPIC-type PPIASE domain LDB30_14030 PF01061 ABC-2 type transporter LDB30_14035 PF01722 BolA-like protein LDB30_14040 PF00462 Glutaredoxin LDB30_14045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDB30_14050 PF01634 ATP phosphoribosyltransferase LDB30_14055 PF00815 Histidinol dehydrogenase LDB30_14060 PF00155 Aminotransferase class I and II LDB30_14065 PF00475 Imidazoleglycerol-phosphate dehydratase LDB30_14070 PF00117 Glutamine amidotransferase class-I LDB30_14075 PF00977 Histidine biosynthesis protein LDB30_14080 PF00977 Histidine biosynthesis protein LDB30_14085 PF01502 Phosphoribosyl-AMP cyclohydrolase LDB30_14085 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LDB30_14090 PF02416 mttA/Hcf106 family LDB30_14095 PF02416 mttA/Hcf106 family LDB30_14100 PF00902 Sec-independent protein translocase protein (TatC) LDB30_14105 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LDB30_14105 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LDB30_14110 PF00101 Ribulose bisphosphate carboxylase, small chain LDB30_14115 PF08406 CbbQ/NirQ/NorQ C-terminal LDB30_14115 PF07728 AAA domain (dynein-related subfamily) LDB30_14125 PF00216 Bacterial DNA-binding protein LDB30_14130 PF00990 Diguanylate cyclase, GGDEF domain LDB30_14130 PF03707 Bacterial signalling protein N terminal repeat LDB30_14130 PF00563 EAL domain LDB30_14135 PF01979 Amidohydrolase family LDB30_14140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDB30_14140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDB30_14145 PF00156 Phosphoribosyl transferase domain LDB30_14150 PF03652 Holliday junction resolvase LDB30_14155 PF02622 Uncharacterized ACR, COG1678 LDB30_14160 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LDB30_14160 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LDB30_14170 PF00285 Citrate synthase, C-terminal domain LDB30_14175 PF01521 Iron-sulphur cluster biosynthesis LDB30_14180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDB30_14180 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_14185 PF02780 Transketolase, C-terminal domain LDB30_14185 PF00364 Biotin-requiring enzyme LDB30_14185 PF02779 Transketolase, pyrimidine binding domain LDB30_14190 PF00676 Dehydrogenase E1 component LDB30_14205 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDB30_14205 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDB30_14210 PF00380 Ribosomal protein S9/S16 LDB30_14215 PF00572 Ribosomal protein L13 LDB30_14225 PF00881 Nitroreductase family LDB30_14255 PF00579 tRNA synthetases class I (W and Y) LDB30_14260 PF00689 Cation transporting ATPase, C-terminus LDB30_14260 PF00690 Cation transporter/ATPase, N-terminus LDB30_14265 PF02261 Aspartate decarboxylase LDB30_14275 PF01926 50S ribosome-binding GTPase LDB30_14280 PF07885 Ion channel LDB30_14280 PF02254 TrkA-N domain LDB30_14285 PF01612 3'-5' exonuclease LDB30_14285 PF00476 DNA polymerase family A LDB30_14285 PF01367 5'-3' exonuclease, C-terminal SAM fold LDB30_14285 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDB30_14290 PF03641 Possible lysine decarboxylase LDB30_14300 PF01636 Phosphotransferase enzyme family LDB30_14320 PF00580 UvrD/REP helicase N-terminal domain LDB30_14320 PF13361 UvrD-like helicase C-terminal domain LDB30_14325 PF01556 DnaJ C terminal domain LDB30_14325 PF00226 DnaJ domain LDB30_14335 PF05139 Erythromycin esterase LDB30_14335 PF00156 Phosphoribosyl transferase domain LDB30_14340 PF14791 DNA polymerase beta thumb LDB30_14340 PF14716 Helix-hairpin-helix domain LDB30_14340 PF02811 PHP domain LDB30_14350 PF00034 Cytochrome c LDB30_14355 PF00106 short chain dehydrogenase LDB30_14360 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LDB30_14360 PF00355 Rieske [2Fe-2S] domain LDB30_14365 PF00033 Cytochrome b/b6/petB LDB30_14365 PF00032 Cytochrome b(C-terminal)/b6/petD LDB30_14375 PF05140 ResB-like family LDB30_14380 PF01578 Cytochrome C assembly protein LDB30_14425 PF00667 FAD binding domain LDB30_14425 PF00258 Flavodoxin LDB30_14425 PF00175 Oxidoreductase NAD-binding domain LDB30_14430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDB30_14430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDB30_14435 PF01507 Phosphoadenosine phosphosulfate reductase family LDB30_14440 PF01507 Phosphoadenosine phosphosulfate reductase family LDB30_14445 PF00009 Elongation factor Tu GTP binding domain LDB30_14450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDB30_14470 PF02416 mttA/Hcf106 family LDB30_14485 PF00512 His Kinase A (phospho-acceptor) domain LDB30_14485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_14490 PF00072 Response regulator receiver domain LDB30_14505 PF02082 Transcriptional regulator LDB30_14510 PF07690 Major Facilitator Superfamily LDB30_14515 PF01040 UbiA prenyltransferase family LDB30_14525 PF00127 Copper binding proteins, plastocyanin/azurin family LDB30_14540 PF00115 Cytochrome C and Quinol oxidase polypeptide I LDB30_14545 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LDB30_14555 PF00034 Cytochrome c LDB30_14585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_14585 PF00183 Hsp90 protein LDB30_14595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDB30_14595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDB30_14610 PF00005 ABC transporter LDB30_14645 PF00106 short chain dehydrogenase LDB30_14650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDB30_14675 PF01695 IstB-like ATP binding protein LDB30_14680 PF00665 Integrase core domain LDB30_14715 PF14338 Mrr N-terminal domain LDB30_14715 PF04471 Restriction endonuclease LDB30_14745 PF01555 DNA methylase LDB30_14755 PF00270 DEAD/DEAH box helicase LDB30_14755 PF13749 Putative ATP-dependent DNA helicase recG C-terminal LDB30_14755 PF17191 RecG wedge domain LDB30_14770 PF11426 Tn7 transposition regulator TnsC LDB30_14770 PF13401 AAA domain LDB30_14775 PF00665 Integrase core domain LDB30_14780 PF08722 TnsA endonuclease N terminal LDB30_14780 PF08721 TnsA endonuclease C terminal LDB30_14785 PF01380 SIS domain LDB30_14790 PF00132 Bacterial transferase hexapeptide (six repeats) LDB30_14790 PF12804 MobA-like NTP transferase domain LDB30_14790 PF14602 Hexapeptide repeat of succinyl-transferase LDB30_14795 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LDB30_14795 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LDB30_14800 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDB30_14800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDB30_14805 PF00231 ATP synthase LDB30_14810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDB30_14810 PF00306 ATP synthase alpha/beta chain, C terminal domain LDB30_14810 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDB30_14815 PF00213 ATP synthase delta (OSCP) subunit LDB30_14820 PF00430 ATP synthase B/B' CF(0) LDB30_14825 PF00137 ATP synthase subunit C LDB30_14830 PF00119 ATP synthase A chain LDB30_14840 PF02195 ParB-like nuclease domain LDB30_14840 PF17762 HTH domain found in ParB protein LDB30_14845 PF13614 AAA domain LDB30_14850 PF02527 rRNA small subunit methyltransferase G LDB30_14855 PF13932 GidA associated domain LDB30_14855 PF01134 Glucose inhibited division protein A LDB30_14870 PF00994 Probable molybdopterin binding domain LDB30_14900 PF03358 NADPH-dependent FMN reductase LDB30_14905 PF05726 Pirin C-terminal cupin domain LDB30_14905 PF02678 Pirin LDB30_14915 PF02534 Type IV secretory system Conjugative DNA transfer LDB30_14950 PF01061 ABC-2 type transporter LDB30_14955 PF00005 ABC transporter LDB30_14960 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LDB30_14970 PF03232 Ubiquinone biosynthesis protein COQ7 LDB30_14975 PF02082 Transcriptional regulator LDB30_14985 PF00218 Indole-3-glycerol phosphate synthase LDB30_14990 PF02885 Glycosyl transferase family, helical bundle domain LDB30_14990 PF00591 Glycosyl transferase family, a/b domain LDB30_14995 PF00117 Glutamine amidotransferase class-I LDB30_15000 PF04715 Anthranilate synthase component I, N terminal region LDB30_15000 PF00425 chorismate binding enzyme LDB30_15005 PF13419 Haloacid dehalogenase-like hydrolase LDB30_15010 PF00834 Ribulose-phosphate 3 epimerase family LDB30_15015 PF01116 Fructose-bisphosphate aldolase class-II LDB30_15020 PF00224 Pyruvate kinase, barrel domain LDB30_15020 PF02887 Pyruvate kinase, alpha/beta domain LDB30_15025 PF00162 Phosphoglycerate kinase LDB30_15030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDB30_15030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDB30_15035 PF02779 Transketolase, pyrimidine binding domain LDB30_15035 PF00456 Transketolase, thiamine diphosphate binding domain LDB30_15035 PF02780 Transketolase, C-terminal domain LDB30_15040 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LDB30_15045 PF00459 Inositol monophosphatase family LDB30_15055 PF04452 RNA methyltransferase LDB30_15060 PF02401 LytB protein LDB30_15065 PF02646 RmuC family LDB30_15070 PF01741 Large-conductance mechanosensitive channel, MscL LDB30_15080 PF00873 AcrB/AcrD/AcrF family LDB30_15085 PF13533 Biotin-lipoyl like LDB30_15095 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LDB30_15135 PF00486 Transcriptional regulatory protein, C terminal LDB30_15135 PF00072 Response regulator receiver domain LDB30_15140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_15140 PF00672 HAMP domain LDB30_15140 PF00512 His Kinase A (phospho-acceptor) domain LDB30_15150 PF00206 Lyase LDB30_15150 PF14698 Argininosuccinate lyase C-terminal LDB30_15160 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LDB30_15160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LDB30_15165 PF01161 Phosphatidylethanolamine-binding protein LDB30_15180 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LDB30_15180 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LDB30_15190 PF13183 4Fe-4S dicluster domain LDB30_15190 PF02665 Nitrate reductase gamma subunit LDB30_15190 PF02754 Cysteine-rich domain LDB30_15195 PF00374 Nickel-dependent hydrogenase LDB30_15200 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LDB30_15205 PF02492 CobW/HypB/UreG, nucleotide-binding domain LDB30_15210 PF01455 HupF/HypC family LDB30_15215 PF01924 Hydrogenase formation hypA family LDB30_15220 PF16363 GDP-mannose 4,6 dehydratase LDB30_15225 PF16363 GDP-mannose 4,6 dehydratase LDB30_15230 PF01050 Mannose-6-phosphate isomerase LDB30_15230 PF00483 Nucleotidyl transferase LDB30_15235 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LDB30_15240 PF00483 Nucleotidyl transferase LDB30_15245 PF07690 Major Facilitator Superfamily LDB30_15255 PF00490 Delta-aminolevulinic acid dehydratase LDB30_15265 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LDB30_15265 PF03900 Porphobilinogen deaminase, C-terminal domain LDB30_15275 PF01230 HIT domain LDB30_15280 PF00202 Aminotransferase class-III LDB30_15285 PF02581 Thiamine monophosphate synthase LDB30_15290 PF08543 Phosphomethylpyrimidine kinase LDB30_15295 PF00106 short chain dehydrogenase LDB30_15310 PF08401 Domain of unknown function (DUF1738) LDB30_15310 PF18818 Metallopeptidase superfamily domain LDB30_15310 PF13362 Toprim domain LDB30_15315 PF00589 Phage integrase family LDB30_15315 PF02899 Phage integrase, N-terminal SAM-like domain LDB30_15320 PF00589 Phage integrase family LDB30_15325 PF00589 Phage integrase family LDB30_15325 PF02899 Phage integrase, N-terminal SAM-like domain LDB30_15330 PF08401 Domain of unknown function (DUF1738) LDB30_15330 PF18818 Metallopeptidase superfamily domain LDB30_15330 PF13362 Toprim domain LDB30_15335 PF00665 Integrase core domain LDB30_15340 PF01695 IstB-like ATP binding protein LDB30_15345 PF01850 PIN domain LDB30_15350 PF07704 Rv0623-like transcription factor LDB30_15365 PF13614 AAA domain LDB30_15395 PF01464 Transglycosylase SLT domain LDB30_15400 PF04956 TrbC/VIRB2 family LDB30_15405 PF05101 Type IV secretory pathway, VirB3-like protein LDB30_15410 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LDB30_15425 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LDB30_15435 PF04335 VirB8 protein LDB30_15440 PF03524 Conjugal transfer protein LDB30_15445 PF03743 Bacterial conjugation TrbI-like protein LDB30_15455 PF00437 Type II/IV secretion system protein LDB30_15460 PF02534 Type IV secretory system Conjugative DNA transfer LDB30_15465 PF01037 Lrp/AsnC ligand binding domain LDB30_15470 PF00291 Pyridoxal-phosphate dependent enzyme LDB30_15475 PF07687 Peptidase dimerisation domain LDB30_15475 PF01546 Peptidase family M20/M25/M40 LDB30_15480 PF01546 Peptidase family M20/M25/M40 LDB30_15485 PF13438 Domain of unknown function (DUF4113) LDB30_15485 PF00817 impB/mucB/samB family LDB30_15485 PF11798 IMS family HHH motif LDB30_15485 PF11799 impB/mucB/samB family C-terminal domain LDB30_15575 PF00034 Cytochrome c LDB30_15595 PF01136 Peptidase family U32 LDB30_15610 PF01680 SOR/SNZ family LDB30_15615 PF01174 SNO glutamine amidotransferase family LDB30_15630 PF04055 Radical SAM superfamily LDB30_15635 PF13808 DDE_Tnp_1-associated LDB30_15635 PF01609 Transposase DDE domain LDB30_15645 PF01695 IstB-like ATP binding protein LDB30_15650 PF00665 Integrase core domain LDB30_15665 PF03814 Potassium-transporting ATPase A subunit LDB30_15675 PF02669 K+-transporting ATPase, c chain LDB30_15685 PF02702 Osmosensitive K+ channel His kinase sensor domain LDB30_15685 PF00512 His Kinase A (phospho-acceptor) domain LDB30_15685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_15685 PF13492 GAF domain LDB30_15685 PF13493 Domain of unknown function (DUF4118) LDB30_15690 PF00486 Transcriptional regulatory protein, C terminal LDB30_15690 PF00072 Response regulator receiver domain LDB30_15725 PF11800 Replication protein C C-terminal region LDB30_15725 PF03428 Replication protein C N-terminal domain LDB30_15745 PF11798 IMS family HHH motif LDB30_15745 PF00817 impB/mucB/samB family LDB30_15745 PF13438 Domain of unknown function (DUF4113) LDB30_15745 PF11799 impB/mucB/samB family C-terminal domain LDB30_15755 PF17862 AAA+ lid domain LDB30_15755 PF06480 FtsH Extracellular LDB30_15755 PF01434 Peptidase family M41 LDB30_15755 PF00004 ATPase family associated with various cellular activities (AAA) LDB30_15770 PF02796 Helix-turn-helix domain of resolvase LDB30_15770 PF00239 Resolvase, N terminal domain LDB30_15785 PF02796 Helix-turn-helix domain of resolvase LDB30_15785 PF00239 Resolvase, N terminal domain LDB30_15820 PF00872 Transposase, Mutator family LDB30_15825 PF00665 Integrase core domain LDB30_15830 PF01695 IstB-like ATP binding protein LDB30_15840 PF00145 C-5 cytosine-specific DNA methylase LDB30_15840 PF18284 DNA methylase N-terminal domain LDB30_15845 PF03852 DNA mismatch endonuclease Vsr LDB30_15850 PF09217 Restriction endonuclease EcoRII, N-terminal LDB30_15850 PF09019 EcoRII C terminal LDB30_15865 PF07015 VirC1 protein LDB30_15890 PF00873 AcrB/AcrD/AcrF family LDB30_15895 PF00581 Rhodanese-like domain LDB30_15900 PF00753 Metallo-beta-lactamase superfamily LDB30_15900 PF00581 Rhodanese-like domain LDB30_15905 PF07690 Major Facilitator Superfamily LDB30_15925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDB30_15925 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB30_15925 PF00403 Heavy-metal-associated domain LDB30_15930 PF13411 MerR HTH family regulatory protein LDB30_15940 PF17841 BID domain of Bartonella effector protein (Bep) LDB30_15940 PF01443 Viral (Superfamily 1) RNA helicase LDB30_15940 PF03389 MobA/MobL family LDB30_15950 PF01850 PIN domain LDB30_15970 PF13614 AAA domain LDB30_15980 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LDB30_16005 PF02796 Helix-turn-helix domain of resolvase LDB30_16005 PF00239 Resolvase, N terminal domain LDB30_16015 PF00486 Transcriptional regulatory protein, C terminal LDB30_16015 PF00072 Response regulator receiver domain LDB30_16020 PF00512 His Kinase A (phospho-acceptor) domain LDB30_16020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB30_16020 PF00672 HAMP domain LDB30_16030 PF05045 Rhamnan synthesis protein F LDB30_16030 PF14307 Glycosyltransferase WbsX LDB30_16035 PF05045 Rhamnan synthesis protein F LDB30_16050 PF02796 Helix-turn-helix domain of resolvase LDB30_16050 PF00239 Resolvase, N terminal domain LDB30_16090 PF01443 Viral (Superfamily 1) RNA helicase LDB30_16090 PF03389 MobA/MobL family LDB30_16090 PF17841 BID domain of Bartonella effector protein (Bep) LDB30_16110 PF01061 ABC-2 type transporter LDB30_16115 PF00005 ABC transporter LDB30_16120 PF16363 GDP-mannose 4,6 dehydratase LDB30_16125 PF00483 Nucleotidyl transferase LDB30_16130 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LDB30_16135 PF04321 RmlD substrate binding domain LDB30_16175 PF03389 MobA/MobL family LDB30_16190 PF11740 Plasmid replication region DNA-binding N-term