locus-tag class description GCD22_00001 PF11638 DnaA N-terminal domain GCD22_00001 PF08299 Bacterial dnaA protein helix-turn-helix GCD22_00001 PF00308 Bacterial dnaA protein GCD22_00002 PF02767 DNA polymerase III beta subunit, central domain GCD22_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain GCD22_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain GCD22_00003 PF02463 RecF/RecN/SMC N terminal domain GCD22_00004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_00004 PF01751 Toprim domain GCD22_00004 PF18053 DNA gyrase B subunit insert domain GCD22_00004 PF00986 DNA gyrase B subunit, carboxyl terminus GCD22_00004 PF00204 DNA gyrase B GCD22_00006 PF07992 Pyridine nucleotide-disulphide oxidoreductase GCD22_00008 PF03776 Septum formation topological specificity factor MinE GCD22_00009 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GCD22_00010 PF03775 Septum formation inhibitor MinC, C-terminal domain GCD22_00010 PF05209 Septum formation inhibitor MinC, N-terminal domain GCD22_00011 PF00037 4Fe-4S binding domain GCD22_00011 PF11953 Domain of unknown function (DUF3470) GCD22_00012 PF01751 Toprim domain GCD22_00012 PF13368 Topoisomerase C-terminal repeat GCD22_00012 PF01131 DNA topoisomerase GCD22_00013 PF04361 Protein of unknown function (DUF494) GCD22_00014 PF17782 DprA winged helix domain GCD22_00014 PF02481 DNA recombination-mediator protein A GCD22_00016 PF01327 Polypeptide deformylase GCD22_00017 PF02911 Formyl transferase, C-terminal domain GCD22_00017 PF00551 Formyl transferase GCD22_00018 PF01029 NusB family GCD22_00018 PF01189 16S rRNA methyltransferase RsmB/F GCD22_00020 PF00989 PAS fold GCD22_00020 PF00672 HAMP domain GCD22_00020 PF00512 His Kinase A (phospho-acceptor) domain GCD22_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_00021 PF00158 Sigma-54 interaction domain GCD22_00021 PF02954 Bacterial regulatory protein, Fis family GCD22_00021 PF00072 Response regulator receiver domain GCD22_00024 PF02913 FAD linked oxidases, C-terminal domain GCD22_00024 PF01565 FAD binding domain GCD22_00025 PF01565 FAD binding domain GCD22_00026 PF02754 Cysteine-rich domain GCD22_00026 PF13183 4Fe-4S dicluster domain GCD22_00031 PF00994 Probable molybdopterin binding domain GCD22_00034 PF12161 HsdM N-terminal domain GCD22_00034 PF02384 N-6 DNA Methylase GCD22_00035 PF06250 YhcG PDDEXK nuclease domain GCD22_00035 PF17761 DUF1016 N-terminal domain GCD22_00036 PF01420 Type I restriction modification DNA specificity domain GCD22_00039 PF18766 SWI2/SNF2 ATPase GCD22_00039 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GCD22_00039 PF12008 Type I restriction and modification enzyme - subunit R C terminal GCD22_00040 PF18766 SWI2/SNF2 ATPase GCD22_00040 PF12008 Type I restriction and modification enzyme - subunit R C terminal GCD22_00040 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GCD22_00041 PF13932 GidA associated domain GCD22_00041 PF01134 Glucose inhibited division protein A GCD22_00042 PF02527 rRNA small subunit methyltransferase G GCD22_00043 PF13614 AAA domain GCD22_00044 PF02195 ParB-like nuclease domain GCD22_00044 PF17762 HTH domain found in ParB protein GCD22_00046 PF00119 ATP synthase A chain GCD22_00047 PF00137 ATP synthase subunit C GCD22_00048 PF00430 ATP synthase B/B' CF(0) GCD22_00049 PF00213 ATP synthase delta (OSCP) subunit GCD22_00050 PF02874 ATP synthase alpha/beta family, beta-barrel domain GCD22_00050 PF00306 ATP synthase alpha/beta chain, C terminal domain GCD22_00050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GCD22_00051 PF00231 ATP synthase GCD22_00052 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GCD22_00052 PF02874 ATP synthase alpha/beta family, beta-barrel domain GCD22_00053 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GCD22_00053 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GCD22_00054 PF12804 MobA-like NTP transferase domain GCD22_00054 PF00132 Bacterial transferase hexapeptide (six repeats) GCD22_00054 PF14602 Hexapeptide repeat of succinyl-transferase GCD22_00055 PF01380 SIS domain GCD22_00057 PF13280 WYL domain GCD22_00057 PF08279 HTH domain GCD22_00063 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GCD22_00066 PF00881 Nitroreductase family GCD22_00067 PF08721 TnsA endonuclease C terminal GCD22_00067 PF08722 TnsA endonuclease N terminal GCD22_00068 PF00665 Integrase core domain GCD22_00069 PF11426 Tn7 transposition regulator TnsC GCD22_00069 PF13401 AAA domain GCD22_00070 PF06527 TniQ GCD22_00070 PF15978 Tn7-like transposition protein D GCD22_00071 PF18623 TnsE C-terminal domain GCD22_00072 PF09278 MerR, DNA binding GCD22_00072 PF00376 MerR family regulatory protein GCD22_00073 PF02411 MerT mercuric transport protein GCD22_00074 PF00403 Heavy-metal-associated domain GCD22_00075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GCD22_00075 PF07992 Pyridine nucleotide-disulphide oxidoreductase GCD22_00075 PF00403 Heavy-metal-associated domain GCD22_00076 PF00581 Rhodanese-like domain GCD22_00076 PF00753 Metallo-beta-lactamase superfamily GCD22_00078 PF07690 Major Facilitator Superfamily GCD22_00082 PF05114 Protein of unknown function (DUF692) GCD22_00086 PF02683 Cytochrome C biogenesis protein transmembrane region GCD22_00086 PF11412 Disulphide bond corrector protein DsbC GCD22_00094 PF00376 MerR family regulatory protein GCD22_00094 PF09278 MerR, DNA binding GCD22_00099 PF00403 Heavy-metal-associated domain GCD22_00103 PF00873 AcrB/AcrD/AcrF family GCD22_00105 PF00563 EAL domain GCD22_00105 PF00990 Diguanylate cyclase, GGDEF domain GCD22_00105 PF03707 Bacterial signalling protein N terminal repeat GCD22_00108 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GCD22_00108 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GCD22_00110 PF01556 DnaJ C terminal domain GCD22_00110 PF00226 DnaJ domain GCD22_00111 PF13361 UvrD-like helicase C-terminal domain GCD22_00111 PF00580 UvrD/REP helicase N-terminal domain GCD22_00113 PF01636 Phosphotransferase enzyme family GCD22_00115 PF03641 Possible lysine decarboxylase GCD22_00116 PF01612 3'-5' exonuclease GCD22_00116 PF00476 DNA polymerase family A GCD22_00116 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GCD22_00116 PF01367 5'-3' exonuclease, C-terminal SAM fold GCD22_00117 PF02254 TrkA-N domain GCD22_00117 PF07885 Ion channel GCD22_00118 PF01926 50S ribosome-binding GTPase GCD22_00120 PF05140 ResB-like family GCD22_00121 PF01578 Cytochrome C assembly protein GCD22_00123 PF02261 Aspartate decarboxylase GCD22_00126 PF00579 tRNA synthetases class I (W and Y) GCD22_00134 PF00881 Nitroreductase family GCD22_00136 PF07690 Major Facilitator Superfamily GCD22_00138 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GCD22_00139 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GCD22_00140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GCD22_00140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GCD22_00140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GCD22_00142 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GCD22_00142 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GCD22_00142 PF10531 SLBB domain GCD22_00143 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GCD22_00143 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GCD22_00143 PF00384 Molybdopterin oxidoreductase GCD22_00143 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GCD22_00143 PF00384 Molybdopterin oxidoreductase GCD22_00143 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GCD22_00144 PF00146 NADH dehydrogenase GCD22_00145 PF12838 4Fe-4S dicluster domain GCD22_00146 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GCD22_00148 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GCD22_00149 PF00361 Proton-conducting membrane transporter GCD22_00149 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GCD22_00150 PF00361 Proton-conducting membrane transporter GCD22_00151 PF00361 Proton-conducting membrane transporter GCD22_00152 PF00572 Ribosomal protein L13 GCD22_00153 PF00380 Ribosomal protein S9/S16 GCD22_00154 PF02774 Semialdehyde dehydrogenase, dimerisation domain GCD22_00154 PF01118 Semialdehyde dehydrogenase, NAD binding domain GCD22_00155 PF13188 PAS domain GCD22_00155 PF03707 Bacterial signalling protein N terminal repeat GCD22_00155 PF00990 Diguanylate cyclase, GGDEF domain GCD22_00155 PF00563 EAL domain GCD22_00163 PF00691 OmpA family GCD22_00164 PF00676 Dehydrogenase E1 component GCD22_00165 PF02779 Transketolase, pyrimidine binding domain GCD22_00165 PF00364 Biotin-requiring enzyme GCD22_00165 PF02780 Transketolase, C-terminal domain GCD22_00166 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GCD22_00166 PF07992 Pyridine nucleotide-disulphide oxidoreductase GCD22_00168 PF01521 Iron-sulphur cluster biosynthesis GCD22_00169 PF00285 Citrate synthase, C-terminal domain GCD22_00171 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GCD22_00171 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GCD22_00174 PF00156 Phosphoribosyl transferase domain GCD22_00175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GCD22_00175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GCD22_00176 PF01979 Amidohydrolase family GCD22_00181 PF00902 Sec-independent protein translocase protein (TatC) GCD22_00182 PF02416 mttA/Hcf106 family GCD22_00183 PF02416 mttA/Hcf106 family GCD22_00184 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GCD22_00184 PF01502 Phosphoribosyl-AMP cyclohydrolase GCD22_00185 PF00977 Histidine biosynthesis protein GCD22_00186 PF00977 Histidine biosynthesis protein GCD22_00187 PF00117 Glutamine amidotransferase class-I GCD22_00188 PF00475 Imidazoleglycerol-phosphate dehydratase GCD22_00189 PF00155 Aminotransferase class I and II GCD22_00190 PF00815 Histidinol dehydrogenase GCD22_00191 PF01634 ATP phosphoribosyltransferase GCD22_00192 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GCD22_00193 PF00462 Glutaredoxin GCD22_00195 PF01061 ABC-2 type transporter GCD22_00196 PF09312 SurA N-terminal domain GCD22_00196 PF00639 PPIC-type PPIASE domain GCD22_00197 PF04453 LPS transport system D GCD22_00198 PF01636 Phosphotransferase enzyme family GCD22_00199 PF00483 Nucleotidyl transferase GCD22_00202 PF00571 CBS domain GCD22_00202 PF01380 SIS domain GCD22_00205 PF03968 OstA-like protein GCD22_00206 PF00005 ABC transporter GCD22_00207 PF00309 Sigma-54 factor, Activator interacting domain (AID) GCD22_00207 PF04963 Sigma-54 factor, core binding domain GCD22_00207 PF04552 Sigma-54, DNA binding domain GCD22_00208 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GCD22_00209 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GCD22_00209 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GCD22_00210 PF02603 HPr Serine kinase N terminus GCD22_00210 PF07475 HPr Serine kinase C-terminal domain GCD22_00213 PF00381 PTS HPr component phosphorylation site GCD22_00214 PF02896 PEP-utilising enzyme, TIM barrel domain GCD22_00214 PF00391 PEP-utilising enzyme, mobile domain GCD22_00214 PF05524 PEP-utilising enzyme, N-terminal GCD22_00216 PF14815 NUDIX domain GCD22_00216 PF00730 HhH-GPD superfamily base excision DNA repair protein GCD22_00222 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_00222 PF00512 His Kinase A (phospho-acceptor) domain GCD22_00224 PF00072 Response regulator receiver domain GCD22_00224 PF00158 Sigma-54 interaction domain GCD22_00225 PF00282 Pyridoxal-dependent decarboxylase conserved domain GCD22_00226 PF00581 Rhodanese-like domain GCD22_00227 PF00300 Histidine phosphatase superfamily (branch 1) GCD22_00228 PF17284 Spermidine synthase tetramerisation domain GCD22_00229 PF02675 S-adenosylmethionine decarboxylase GCD22_00230 PF00005 ABC transporter GCD22_00231 PF02405 Permease MlaE GCD22_00232 PF02470 MlaD protein GCD22_00235 PF00005 ABC transporter GCD22_00237 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GCD22_00239 PF00398 Ribosomal RNA adenine dimethylase GCD22_00242 PF03485 Arginyl tRNA synthetase N terminal domain GCD22_00242 PF05746 DALR anticodon binding domain GCD22_00242 PF00750 tRNA synthetases class I (R) GCD22_00243 PF07690 Major Facilitator Superfamily GCD22_00244 PF03466 LysR substrate binding domain GCD22_00244 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_00245 PF05175 Methyltransferase small domain GCD22_00246 PF03372 Endonuclease/Exonuclease/phosphatase family GCD22_00248 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GCD22_00249 PF00043 Glutathione S-transferase, C-terminal domain GCD22_00249 PF13417 Glutathione S-transferase, N-terminal domain GCD22_00250 PF03372 Endonuclease/Exonuclease/phosphatase family GCD22_00251 PF00762 Ferrochelatase GCD22_00252 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GCD22_00253 PF03702 Anhydro-N-acetylmuramic acid kinase GCD22_00254 PF08501 Shikimate dehydrogenase substrate binding domain GCD22_00254 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GCD22_00254 PF01488 Shikimate / quinate 5-dehydrogenase GCD22_00255 PF00437 Type II/IV secretion system protein GCD22_00255 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GCD22_00256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_00256 PF00512 His Kinase A (phospho-acceptor) domain GCD22_00257 PF00072 Response regulator receiver domain GCD22_00257 PF02954 Bacterial regulatory protein, Fis family GCD22_00257 PF00158 Sigma-54 interaction domain GCD22_00258 PF01478 Type IV leader peptidase family GCD22_00258 PF06750 Bacterial Peptidase A24 N-terminal domain GCD22_00259 PF01121 Dephospho-CoA kinase GCD22_00260 PF07072 Cell division protein GCD22_00261 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GCD22_00263 PF01522 Polysaccharide deacetylase GCD22_00264 PF04820 Tryptophan halogenase GCD22_00268 PF00106 short chain dehydrogenase GCD22_00272 PF00109 Beta-ketoacyl synthase, N-terminal domain GCD22_00272 PF02801 Beta-ketoacyl synthase, C-terminal domain GCD22_00283 PF10145 Phage-related minor tail protein GCD22_00283 PF01551 Peptidase family M23 GCD22_00283 PF01464 Transglycosylase SLT domain GCD22_00287 PF02785 Biotin carboxylase C-terminal domain GCD22_00287 PF00289 Biotin carboxylase, N-terminal domain GCD22_00287 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GCD22_00288 PF00364 Biotin-requiring enzyme GCD22_00289 PF01220 Dehydroquinase class II GCD22_00292 PF12327 FtsZ family, C-terminal domain GCD22_00292 PF00091 Tubulin/FtsZ family, GTPase domain GCD22_00293 PF02491 SHS2 domain inserted in FTSA GCD22_00294 PF08478 POTRA domain, FtsQ-type GCD22_00294 PF03799 Cell division protein FtsQ GCD22_00295 PF01820 D-ala D-ala ligase N-terminus GCD22_00295 PF07478 D-ala D-ala ligase C-terminus GCD22_00296 PF01565 FAD binding domain GCD22_00296 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GCD22_00297 PF08245 Mur ligase middle domain GCD22_00297 PF01225 Mur ligase family, catalytic domain GCD22_00297 PF02875 Mur ligase family, glutamate ligase domain GCD22_00298 PF04101 Glycosyltransferase family 28 C-terminal domain GCD22_00298 PF03033 Glycosyltransferase family 28 N-terminal domain GCD22_00299 PF01098 Cell cycle protein GCD22_00300 PF02875 Mur ligase family, glutamate ligase domain GCD22_00300 PF08245 Mur ligase middle domain GCD22_00301 PF00953 Glycosyl transferase family 4 GCD22_00301 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GCD22_00302 PF08245 Mur ligase middle domain GCD22_00302 PF01225 Mur ligase family, catalytic domain GCD22_00302 PF02875 Mur ligase family, glutamate ligase domain GCD22_00303 PF01225 Mur ligase family, catalytic domain GCD22_00303 PF02875 Mur ligase family, glutamate ligase domain GCD22_00303 PF08245 Mur ligase middle domain GCD22_00304 PF03717 Penicillin-binding Protein dimerisation domain GCD22_00304 PF00905 Penicillin binding protein transpeptidase domain GCD22_00306 PF01795 MraW methylase family GCD22_00307 PF02381 MraZ protein, putative antitoxin-like GCD22_00309 PF12627 Probable RNA and SrmB- binding site of polymerase A GCD22_00309 PF01966 HD domain GCD22_00309 PF01743 Poly A polymerase head domain GCD22_00310 PF00501 AMP-binding enzyme GCD22_00311 PF00043 Glutathione S-transferase, C-terminal domain GCD22_00311 PF02798 Glutathione S-transferase, N-terminal domain GCD22_00312 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GCD22_00313 PF07516 SecA Wing and Scaffold domain GCD22_00313 PF01043 SecA preprotein cross-linking domain GCD22_00313 PF07517 SecA DEAD-like domain GCD22_00313 PF02810 SEC-C motif GCD22_00314 PF01960 ArgJ family GCD22_00315 PF00293 NUDIX domain GCD22_00316 PF00535 Glycosyl transferase family 2 GCD22_00318 PF13439 Glycosyltransferase Family 4 GCD22_00318 PF00534 Glycosyl transferases group 1 GCD22_00322 PF00535 Glycosyl transferase family 2 GCD22_00323 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GCD22_00325 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GCD22_00326 PF00155 Aminotransferase class I and II GCD22_00327 PF03781 Sulfatase-modifying factor enzyme 1 GCD22_00327 PF12867 DinB superfamily GCD22_00328 PF05145 Transition state regulatory protein AbrB GCD22_00329 PF00588 SpoU rRNA Methylase family GCD22_00330 PF00156 Phosphoribosyl transferase domain GCD22_00331 PF00155 Aminotransferase class I and II GCD22_00332 PF00561 alpha/beta hydrolase fold GCD22_00333 PF08241 Methyltransferase domain GCD22_00335 PF01435 Peptidase family M48 GCD22_00336 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GCD22_00337 PF04376 Arginine-tRNA-protein transferase, N terminus GCD22_00337 PF04377 Arginine-tRNA-protein transferase, C terminus GCD22_00338 PF03649 Uncharacterised protein family (UPF0014) GCD22_00339 PF00929 Exonuclease GCD22_00340 PF00970 Oxidoreductase FAD-binding domain GCD22_00340 PF00111 2Fe-2S iron-sulfur cluster binding domain GCD22_00340 PF00175 Oxidoreductase NAD-binding domain GCD22_00344 PF00440 Bacterial regulatory proteins, tetR family GCD22_00345 PF00696 Amino acid kinase family GCD22_00347 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCD22_00347 PF00529 HlyD membrane-fusion protein of T1SS GCD22_00349 PF06968 Biotin and Thiamin Synthesis associated domain GCD22_00349 PF04055 Radical SAM superfamily GCD22_00351 PF03807 NADP oxidoreductase coenzyme F420-dependent GCD22_00351 PF14748 Pyrroline-5-carboxylate reductase dimerisation GCD22_00353 PF00437 Type II/IV secretion system protein GCD22_00354 PF00437 Type II/IV secretion system protein GCD22_00355 PF00535 Glycosyl transferase family 2 GCD22_00358 PF02390 Putative methyltransferase GCD22_00359 PF00731 AIR carboxylase GCD22_00360 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GCD22_00360 PF02222 ATP-grasp domain GCD22_00361 PF02600 Disulfide bond formation protein DsbB GCD22_00363 PF01668 SmpB protein GCD22_00365 PF03364 Polyketide cyclase / dehydrase and lipid transport GCD22_00367 PF04355 SmpA / OmlA family GCD22_00368 PF01475 Ferric uptake regulator family GCD22_00369 PF01472 PUA domain GCD22_00369 PF00696 Amino acid kinase family GCD22_00370 PF01018 GTP1/OBG GCD22_00370 PF01926 50S ribosome-binding GTPase GCD22_00371 PF01016 Ribosomal L27 protein GCD22_00372 PF00829 Ribosomal prokaryotic L21 protein GCD22_00374 PF14850 DNA-binding domain of Proline dehydrogenase GCD22_00374 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GCD22_00374 PF01619 Proline dehydrogenase GCD22_00374 PF00171 Aldehyde dehydrogenase family GCD22_00375 PF01740 STAS domain GCD22_00375 PF00916 Sulfate permease family GCD22_00376 PF08267 Cobalamin-independent synthase, N-terminal domain GCD22_00376 PF01717 Cobalamin-independent synthase, Catalytic domain GCD22_00377 PF01209 ubiE/COQ5 methyltransferase family GCD22_00379 PF00561 alpha/beta hydrolase fold GCD22_00379 PF07021 Methionine biosynthesis protein MetW GCD22_00380 PF00561 alpha/beta hydrolase fold GCD22_00382 PF00464 Serine hydroxymethyltransferase GCD22_00383 PF03477 ATP cone domain GCD22_00384 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GCD22_00384 PF01872 RibD C-terminal domain GCD22_00385 PF00677 Lumazine binding domain GCD22_00386 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GCD22_00386 PF00925 GTP cyclohydrolase II GCD22_00387 PF00885 6,7-dimethyl-8-ribityllumazine synthase GCD22_00388 PF01029 NusB family GCD22_00391 PF03109 ABC1 family GCD22_00392 PF00691 OmpA family GCD22_00392 PF04972 BON domain GCD22_00396 PF03144 Elongation factor Tu domain 2 GCD22_00396 PF03143 Elongation factor Tu C-terminal domain GCD22_00396 PF00009 Elongation factor Tu GTP binding domain GCD22_00399 PF00467 KOW motif GCD22_00399 PF02357 Transcription termination factor nusG GCD22_00400 PF00298 Ribosomal protein L11, RNA binding domain GCD22_00400 PF03946 Ribosomal protein L11, N-terminal domain GCD22_00401 PF00687 Ribosomal protein L1p/L10e family GCD22_00402 PF00466 Ribosomal protein L10 GCD22_00403 PF16320 Ribosomal protein L7/L12 dimerisation domain GCD22_00403 PF00542 Ribosomal protein L7/L12 C-terminal domain GCD22_00404 PF04560 RNA polymerase Rpb2, domain 7 GCD22_00404 PF10385 RNA polymerase beta subunit external 1 domain GCD22_00404 PF04563 RNA polymerase beta subunit GCD22_00404 PF00562 RNA polymerase Rpb2, domain 6 GCD22_00404 PF04565 RNA polymerase Rpb2, domain 3 GCD22_00404 PF04561 RNA polymerase Rpb2, domain 2 GCD22_00405 PF05000 RNA polymerase Rpb1, domain 4 GCD22_00405 PF00623 RNA polymerase Rpb1, domain 2 GCD22_00405 PF04998 RNA polymerase Rpb1, domain 5 GCD22_00405 PF04983 RNA polymerase Rpb1, domain 3 GCD22_00405 PF04997 RNA polymerase Rpb1, domain 1 GCD22_00406 PF00164 Ribosomal protein S12/S23 GCD22_00407 PF00177 Ribosomal protein S7p/S5e GCD22_00408 PF14492 Elongation Factor G, domain II GCD22_00408 PF03764 Elongation factor G, domain IV GCD22_00408 PF00009 Elongation factor Tu GTP binding domain GCD22_00408 PF03144 Elongation factor Tu domain 2 GCD22_00408 PF00679 Elongation factor G C-terminus GCD22_00409 PF03144 Elongation factor Tu domain 2 GCD22_00409 PF00009 Elongation factor Tu GTP binding domain GCD22_00409 PF03143 Elongation factor Tu C-terminal domain GCD22_00410 PF00338 Ribosomal protein S10p/S20e GCD22_00411 PF00297 Ribosomal protein L3 GCD22_00412 PF00573 Ribosomal protein L4/L1 family GCD22_00413 PF00276 Ribosomal protein L23 GCD22_00414 PF03947 Ribosomal Proteins L2, C-terminal domain GCD22_00414 PF00181 Ribosomal Proteins L2, RNA binding domain GCD22_00415 PF00203 Ribosomal protein S19 GCD22_00416 PF00237 Ribosomal protein L22p/L17e GCD22_00417 PF07650 KH domain GCD22_00417 PF00189 Ribosomal protein S3, C-terminal domain GCD22_00418 PF00252 Ribosomal protein L16p/L10e GCD22_00419 PF00831 Ribosomal L29 protein GCD22_00420 PF00366 Ribosomal protein S17 GCD22_00421 PF00238 Ribosomal protein L14p/L23e GCD22_00422 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GCD22_00422 PF00467 KOW motif GCD22_00423 PF00281 Ribosomal protein L5 GCD22_00423 PF00673 ribosomal L5P family C-terminus GCD22_00424 PF00410 Ribosomal protein S8 GCD22_00425 PF00347 Ribosomal protein L6 GCD22_00426 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GCD22_00427 PF03719 Ribosomal protein S5, C-terminal domain GCD22_00427 PF00333 Ribosomal protein S5, N-terminal domain GCD22_00428 PF00327 Ribosomal protein L30p/L7e GCD22_00429 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GCD22_00430 PF00344 SecY translocase GCD22_00431 PF05191 Adenylate kinase, active site lid GCD22_00432 PF01176 Translation initiation factor 1A / IF-1 GCD22_00433 PF00416 Ribosomal protein S13/S18 GCD22_00434 PF00411 Ribosomal protein S11 GCD22_00435 PF01479 S4 domain GCD22_00435 PF00163 Ribosomal protein S4/S9 N-terminal domain GCD22_00436 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GCD22_00436 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GCD22_00436 PF01000 RNA polymerase Rpb3/RpoA insert domain GCD22_00437 PF01196 Ribosomal protein L17 GCD22_00439 PF00692 dUTPase GCD22_00440 PF02441 Flavoprotein GCD22_00440 PF04127 DNA / pantothenate metabolism flavoprotein GCD22_00441 PF04002 RadC-like JAB domain GCD22_00449 PF07992 Pyridine nucleotide-disulphide oxidoreductase GCD22_00449 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GCD22_00450 PF00462 Glutaredoxin GCD22_00450 PF08534 Redoxin GCD22_00452 PF02559 CarD-like/TRCF domain GCD22_00452 PF00270 DEAD/DEAH box helicase GCD22_00452 PF17757 UvrB interaction domain GCD22_00452 PF03461 TRCF domain GCD22_00452 PF00271 Helicase conserved C-terminal domain GCD22_00454 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GCD22_00455 PF02542 YgbB family GCD22_00456 PF01142 tRNA pseudouridine synthase D (TruD) GCD22_00457 PF13411 MerR HTH family regulatory protein GCD22_00458 PF00403 Heavy-metal-associated domain GCD22_00460 PF07992 Pyridine nucleotide-disulphide oxidoreductase GCD22_00461 PF03358 NADPH-dependent FMN reductase GCD22_00463 PF09397 Ftsk gamma domain GCD22_00463 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GCD22_00463 PF17854 FtsK alpha domain GCD22_00463 PF01580 FtsK/SpoIIIE family GCD22_00464 PF03548 Outer membrane lipoprotein carrier protein LolA GCD22_00466 PF16193 AAA C-terminal domain GCD22_00466 PF00004 ATPase family associated with various cellular activities (AAA) GCD22_00466 PF12002 MgsA AAA+ ATPase C terminal GCD22_00467 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GCD22_00467 PF02403 Seryl-tRNA synthetase N-terminal domain GCD22_00469 PF03734 L,D-transpeptidase catalytic domain GCD22_00469 PF17969 L,D-transpeptidase C-terminal domain GCD22_00476 PF02576 RimP N-terminal domain GCD22_00476 PF17384 RimP C-terminal SH3 domain GCD22_00477 PF00575 S1 RNA binding domain GCD22_00477 PF13184 NusA-like KH domain GCD22_00477 PF08529 NusA N-terminal domain GCD22_00478 PF11987 Translation-initiation factor 2 GCD22_00478 PF00009 Elongation factor Tu GTP binding domain GCD22_00478 PF04760 Translation initiation factor IF-2, N-terminal region GCD22_00478 PF08364 Bacterial translation initiation factor IF-2 associated region GCD22_00479 PF02033 Ribosome-binding factor A GCD22_00480 PF16198 tRNA pseudouridylate synthase B C-terminal domain GCD22_00480 PF09157 Pseudouridine synthase II TruB, C-terminal GCD22_00480 PF01509 TruB family pseudouridylate synthase (N terminal domain) GCD22_00481 PF00312 Ribosomal protein S15 GCD22_00482 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GCD22_00482 PF03725 3' exoribonuclease family, domain 2 GCD22_00482 PF00575 S1 RNA binding domain GCD22_00482 PF00013 KH domain GCD22_00482 PF01138 3' exoribonuclease family, domain 1 GCD22_00484 PF00753 Metallo-beta-lactamase superfamily GCD22_00484 PF16123 Hydroxyacylglutathione hydrolase C-terminus GCD22_00485 PF01209 ubiE/COQ5 methyltransferase family GCD22_00486 PF00075 RNase H GCD22_00487 PF00929 Exonuclease GCD22_00488 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GCD22_00489 PF00764 Arginosuccinate synthase GCD22_00490 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GCD22_00490 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GCD22_00491 PF00202 Aminotransferase class-III GCD22_00492 PF13840 ACT domain GCD22_00492 PF01842 ACT domain GCD22_00492 PF00696 Amino acid kinase family GCD22_00494 PF00923 Transaldolase/Fructose-6-phosphate aldolase GCD22_00496 PF01476 LysM domain GCD22_00496 PF01464 Transglycosylase SLT domain GCD22_00508 PF13495 Phage integrase, N-terminal SAM-like domain GCD22_00508 PF00589 Phage integrase family GCD22_00512 PF00872 Transposase, Mutator family GCD22_00514 PF00749 tRNA synthetases class I (E and Q), catalytic domain GCD22_00515 PF00330 Aconitase family (aconitate hydratase) GCD22_00516 PF00180 Isocitrate/isopropylmalate dehydrogenase GCD22_00517 PF08442 ATP-grasp domain GCD22_00517 PF00549 CoA-ligase GCD22_00519 PF00549 CoA-ligase GCD22_00519 PF02629 CoA binding domain GCD22_00520 PF00795 Carbon-nitrogen hydrolase GCD22_00520 PF02540 NAD synthase GCD22_00521 PF00543 Nitrogen regulatory protein P-II GCD22_00522 PF13525 Outer membrane lipoprotein GCD22_00523 PF00849 RNA pseudouridylate synthase GCD22_00523 PF01479 S4 domain GCD22_00525 PF03079 ARD/ARD' family GCD22_00526 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GCD22_00526 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GCD22_00528 PF00596 Class II Aldolase and Adducin N-terminal domain GCD22_00530 PF01327 Polypeptide deformylase GCD22_00532 PF16363 GDP-mannose 4,6 dehydratase GCD22_00533 PF04321 RmlD substrate binding domain GCD22_00536 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GCD22_00537 PF00483 Nucleotidyl transferase GCD22_00538 PF00483 Nucleotidyl transferase GCD22_00540 PF00072 Response regulator receiver domain GCD22_00540 PF00158 Sigma-54 interaction domain GCD22_00542 PF00512 His Kinase A (phospho-acceptor) domain GCD22_00542 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_00543 PF02463 RecF/RecN/SMC N terminal domain GCD22_00544 PF01513 ATP-NAD kinase GCD22_00545 PF03309 Type III pantothenate kinase GCD22_00546 PF02237 Biotin protein ligase C terminal domain GCD22_00546 PF03309 Type III pantothenate kinase GCD22_00546 PF03099 Biotin/lipoate A/B protein ligase family GCD22_00547 PF00171 Aldehyde dehydrogenase family GCD22_00548 PF06144 DNA polymerase III, delta subunit GCD22_00548 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GCD22_00550 PF00133 tRNA synthetases class I (I, L, M and V) GCD22_00550 PF08264 Anticodon-binding domain of tRNA GCD22_00550 PF09334 tRNA synthetases class I (M) GCD22_00550 PF13603 Leucyl-tRNA synthetase, Domain 2 GCD22_00551 PF06827 Zinc finger found in FPG and IleRS GCD22_00551 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GCD22_00551 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GCD22_00554 PF02384 N-6 DNA Methylase GCD22_00554 PF12161 HsdM N-terminal domain GCD22_00556 PF00271 Helicase conserved C-terminal domain GCD22_00556 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) GCD22_00556 PF04851 Type III restriction enzyme, res subunit GCD22_00556 PF08463 EcoEI R protein C-terminal GCD22_00560 PF00268 Ribonucleotide reductase, small chain GCD22_00561 PF03477 ATP cone domain GCD22_00561 PF00317 Ribonucleotide reductase, all-alpha domain GCD22_00561 PF02867 Ribonucleotide reductase, barrel domain GCD22_00562 PF01523 Putative modulator of DNA gyrase GCD22_00563 PF00004 ATPase family associated with various cellular activities (AAA) GCD22_00563 PF17862 AAA+ lid domain GCD22_00563 PF06480 FtsH Extracellular GCD22_00563 PF01434 Peptidase family M41 GCD22_00564 PF00809 Pterin binding enzyme GCD22_00565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GCD22_00565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GCD22_00565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GCD22_00565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GCD22_00566 PF00121 Triosephosphate isomerase GCD22_00567 PF03840 Preprotein translocase SecG subunit GCD22_00569 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GCD22_00570 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GCD22_00571 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GCD22_00572 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GCD22_00574 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GCD22_00574 PF10531 SLBB domain GCD22_00574 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GCD22_00575 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal GCD22_00575 PF00384 Molybdopterin oxidoreductase GCD22_00575 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GCD22_00576 PF00146 NADH dehydrogenase GCD22_00577 PF12838 4Fe-4S dicluster domain GCD22_00578 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GCD22_00579 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GCD22_00580 PF00361 Proton-conducting membrane transporter GCD22_00580 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GCD22_00581 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus GCD22_00581 PF00361 Proton-conducting membrane transporter GCD22_00582 PF00361 Proton-conducting membrane transporter GCD22_00585 PF03129 Anticodon binding domain GCD22_00585 PF02824 TGS domain GCD22_00585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GCD22_00585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GCD22_00586 PF00707 Translation initiation factor IF-3, C-terminal domain GCD22_00586 PF05198 Translation initiation factor IF-3, N-terminal domain GCD22_00587 PF01632 Ribosomal protein L35 GCD22_00588 PF00453 Ribosomal protein L20 GCD22_00589 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GCD22_00589 PF01409 tRNA synthetases class II core domain (F) GCD22_00590 PF03484 tRNA synthetase B5 domain GCD22_00590 PF01588 Putative tRNA binding domain GCD22_00590 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GCD22_00590 PF03483 B3/4 domain GCD22_00590 PF03147 Ferredoxin-fold anticodon binding domain GCD22_00591 PF00216 Bacterial DNA-binding protein GCD22_00607 PF00872 Transposase, Mutator family GCD22_00611 PF13651 Adenine-specific methyltransferase EcoRI GCD22_00617 PF12728 Helix-turn-helix domain GCD22_00620 PF18818 Metallopeptidase superfamily domain GCD22_00620 PF08401 Domain of unknown function (DUF1738) GCD22_00620 PF13362 Toprim domain GCD22_00633 PF00437 Type II/IV secretion system protein GCD22_00634 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system GCD22_00638 PF03135 CagE, TrbE, VirB family, component of type IV transporter system GCD22_00650 PF04335 VirB8 protein GCD22_00658 PF02534 Type IV secretory system Conjugative DNA transfer GCD22_00660 PF00075 RNase H GCD22_00673 PF00361 Proton-conducting membrane transporter GCD22_00673 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GCD22_00674 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_00674 PF03466 LysR substrate binding domain GCD22_00676 PF01979 Amidohydrolase family GCD22_00682 PF01011 PQQ enzyme repeat GCD22_00682 PF13360 PQQ-like domain GCD22_00682 PF13570 PQQ-like domain GCD22_00683 PF01011 PQQ enzyme repeat GCD22_00683 PF13360 PQQ-like domain GCD22_00683 PF13570 PQQ-like domain GCD22_00688 PF17762 HTH domain found in ParB protein GCD22_00688 PF02195 ParB-like nuclease domain GCD22_00698 PF01751 Toprim domain GCD22_00698 PF01131 DNA topoisomerase GCD22_00701 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GCD22_00706 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system GCD22_00708 PF00905 Penicillin binding protein transpeptidase domain GCD22_00708 PF00912 Transglycosylase GCD22_00708 PF06832 Penicillin-Binding Protein C-terminus Family GCD22_00710 PF02371 Transposase IS116/IS110/IS902 family GCD22_00710 PF01548 Transposase GCD22_00712 PF00872 Transposase, Mutator family GCD22_00715 PF13438 Domain of unknown function (DUF4113) GCD22_00715 PF00817 impB/mucB/samB family GCD22_00715 PF11799 impB/mucB/samB family C-terminal domain GCD22_00716 PF00717 Peptidase S24-like GCD22_00717 PF13520 Amino acid permease GCD22_00722 PF00324 Amino acid permease GCD22_00732 PF00872 Transposase, Mutator family GCD22_00743 PF13362 Toprim domain GCD22_00743 PF08401 Domain of unknown function (DUF1738) GCD22_00743 PF18818 Metallopeptidase superfamily domain GCD22_00753 PF03880 DbpA RNA binding domain GCD22_00753 PF00270 DEAD/DEAH box helicase GCD22_00753 PF00271 Helicase conserved C-terminal domain GCD22_00754 PF00313 'Cold-shock' DNA-binding domain GCD22_00755 PF00072 Response regulator receiver domain GCD22_00755 PF00158 Sigma-54 interaction domain GCD22_00755 PF02954 Bacterial regulatory protein, Fis family GCD22_00756 PF18074 Primosomal protein N C-terminal domain GCD22_00756 PF17764 3′ DNA-binding domain (3′BD) GCD22_00756 PF00271 Helicase conserved C-terminal domain GCD22_00756 PF00270 DEAD/DEAH box helicase GCD22_00756 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GCD22_00757 PF01040 UbiA prenyltransferase family GCD22_00758 PF04345 Chorismate lyase GCD22_00759 PF00398 Ribosomal RNA adenine dimethylase GCD22_00761 PF04055 Radical SAM superfamily GCD22_00761 PF01938 TRAM domain GCD22_00761 PF00919 Uncharacterized protein family UPF0004 GCD22_00762 PF02562 PhoH-like protein GCD22_00763 PF02130 Uncharacterized protein family UPF0054 GCD22_00764 PF00571 CBS domain GCD22_00764 PF03471 Transporter associated domain GCD22_00765 PF00795 Carbon-nitrogen hydrolase GCD22_00766 PF01523 Putative modulator of DNA gyrase GCD22_00767 PF00872 Transposase, Mutator family GCD22_00770 PF00210 Ferritin-like domain GCD22_00772 PF02492 CobW/HypB/UreG, nucleotide-binding domain GCD22_00772 PF07683 Cobalamin synthesis protein cobW C-terminal domain GCD22_00782 PF00005 ABC transporter GCD22_00784 PF00950 ABC 3 transport family GCD22_00786 PF13673 Acetyltransferase (GNAT) domain GCD22_00791 PF08241 Methyltransferase domain GCD22_00792 PF00330 Aconitase family (aconitate hydratase) GCD22_00794 PF00694 Aconitase C-terminal domain GCD22_00796 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GCD22_00796 PF01243 Pyridoxamine 5'-phosphate oxidase GCD22_00797 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GCD22_00799 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GCD22_00799 PF06481 COX Aromatic Rich Motif GCD22_00800 PF00115 Cytochrome C and Quinol oxidase polypeptide I GCD22_00801 PF00510 Cytochrome c oxidase subunit III GCD22_00804 PF01040 UbiA prenyltransferase family GCD22_00805 PF07690 Major Facilitator Superfamily GCD22_00806 PF02673 Bacitracin resistance protein BacA GCD22_00807 PF03449 Transcription elongation factor, N-terminal GCD22_00807 PF01272 Transcription elongation factor, GreA/GreB, C-term GCD22_00808 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GCD22_00808 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GCD22_00808 PF02142 MGS-like domain GCD22_00809 PF00117 Glutamine amidotransferase class-I GCD22_00809 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GCD22_00812 PF03073 TspO/MBR family GCD22_00816 PF07690 Major Facilitator Superfamily GCD22_00823 PF04371 Porphyromonas-type peptidyl-arginine deiminase GCD22_00824 PF00849 RNA pseudouridylate synthase GCD22_00824 PF01479 S4 domain GCD22_00825 PF00293 NUDIX domain GCD22_00826 PF00293 NUDIX domain GCD22_00827 PF06071 Protein of unknown function (DUF933) GCD22_00827 PF01926 50S ribosome-binding GTPase GCD22_00828 PF01195 Peptidyl-tRNA hydrolase GCD22_00829 PF14693 Ribosomal protein TL5, C-terminal domain GCD22_00829 PF01386 Ribosomal L25p family GCD22_00830 PF00905 Penicillin binding protein transpeptidase domain GCD22_00830 PF03717 Penicillin-binding Protein dimerisation domain GCD22_00832 PF01385 Probable transposase GCD22_00832 PF07282 Putative transposase DNA-binding domain GCD22_00832 PF12323 Helix-turn-helix domain GCD22_00834 PF01812 5-formyltetrahydrofolate cyclo-ligase family GCD22_00837 PF00857 Isochorismatase family GCD22_00842 PF00582 Universal stress protein family GCD22_00843 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GCD22_00843 PF03129 Anticodon binding domain GCD22_00843 PF04073 Aminoacyl-tRNA editing domain GCD22_00844 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GCD22_00848 PF00534 Glycosyl transferases group 1 GCD22_00848 PF13439 Glycosyltransferase Family 4 GCD22_00851 PF16363 GDP-mannose 4,6 dehydratase GCD22_00852 PF16363 GDP-mannose 4,6 dehydratase GCD22_00855 PF00005 ABC transporter GCD22_00856 PF01061 ABC-2 type transporter GCD22_00861 PF02556 Preprotein translocase subunit SecB GCD22_00862 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GCD22_00862 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GCD22_00863 PF00989 PAS fold GCD22_00863 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_00863 PF00512 His Kinase A (phospho-acceptor) domain GCD22_00864 PF00072 Response regulator receiver domain GCD22_00864 PF02954 Bacterial regulatory protein, Fis family GCD22_00864 PF00158 Sigma-54 interaction domain GCD22_00868 PF13243 Squalene-hopene cyclase C-terminal domain GCD22_00868 PF13249 Squalene-hopene cyclase N-terminal domain GCD22_00869 PF01048 Phosphorylase superfamily GCD22_00870 PF01370 NAD dependent epimerase/dehydratase family GCD22_00873 PF04794 YdjC-like protein GCD22_00877 PF06463 Molybdenum Cofactor Synthesis C GCD22_00877 PF04055 Radical SAM superfamily GCD22_00878 PF05494 MlaC protein GCD22_00880 PF02686 Glu-tRNAGln amidotransferase C subunit GCD22_00881 PF01425 Amidase GCD22_00882 PF02637 GatB domain GCD22_00882 PF02934 GatB/GatE catalytic domain GCD22_00887 PF06481 COX Aromatic Rich Motif GCD22_00887 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GCD22_00888 PF00115 Cytochrome C and Quinol oxidase polypeptide I GCD22_00889 PF00510 Cytochrome c oxidase subunit III GCD22_00892 PF01040 UbiA prenyltransferase family GCD22_00893 PF02082 Transcriptional regulator GCD22_00897 PF00149 Calcineurin-like phosphoesterase GCD22_00897 PF02872 5'-nucleotidase, C-terminal domain GCD22_00899 PF05140 ResB-like family GCD22_00902 PF01578 Cytochrome C assembly protein GCD22_00907 PF14306 PUA-like domain GCD22_00907 PF01747 ATP-sulfurylase GCD22_00908 PF00156 Phosphoribosyl transferase domain GCD22_00912 PF11855 Protein of unknown function (DUF3375) GCD22_00915 PF00872 Transposase, Mutator family GCD22_00917 PF00872 Transposase, Mutator family GCD22_00922 PF00872 Transposase, Mutator family GCD22_00927 PF00872 Transposase, Mutator family GCD22_00930 PF00872 Transposase, Mutator family GCD22_00931 PF00722 Glycosyl hydrolases family 16 GCD22_00940 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system GCD22_00941 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system GCD22_00947 PF10544 T5orf172 domain GCD22_00957 PF13356 Arm DNA-binding domain GCD22_00957 PF00589 Phage integrase family GCD22_00961 PF00768 D-alanyl-D-alanine carboxypeptidase GCD22_00961 PF07943 Penicillin-binding protein 5, C-terminal domain GCD22_00962 PF07690 Major Facilitator Superfamily GCD22_00969 PF03725 3' exoribonuclease family, domain 2 GCD22_00969 PF01138 3' exoribonuclease family, domain 1 GCD22_00970 PF01725 Ham1 family GCD22_00971 PF00140 Sigma-70 factor, region 1.2 GCD22_00971 PF04542 Sigma-70 region 2 GCD22_00971 PF04545 Sigma-70, region 4 GCD22_00971 PF04539 Sigma-70 region 3 GCD22_00972 PF01165 Ribosomal protein S21 GCD22_00974 PF01713 Smr domain GCD22_00974 PF00488 MutS domain V GCD22_00975 PF08278 DNA primase DnaG DnaB-binding GCD22_00975 PF13662 Toprim domain GCD22_00975 PF08275 DNA primase catalytic core, N-terminal domain GCD22_00975 PF10410 DnaB-helicase binding domain of primase GCD22_00975 PF01807 CHC2 zinc finger GCD22_00976 PF03979 Sigma-70 factor, region 1.1 GCD22_00976 PF04542 Sigma-70 region 2 GCD22_00976 PF04539 Sigma-70 region 3 GCD22_00976 PF04546 Sigma-70, non-essential region GCD22_00976 PF04545 Sigma-70, region 4 GCD22_00976 PF00140 Sigma-70 factor, region 1.2 GCD22_00978 PF01726 LexA DNA binding domain GCD22_00978 PF00717 Peptidase S24-like GCD22_00980 PF01433 Peptidase family M1 domain GCD22_00980 PF11940 Domain of unknown function (DUF3458) Ig-like fold GCD22_00980 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GCD22_00984 PF02503 Polyphosphate kinase middle domain GCD22_00984 PF17941 Polyphosphate kinase C-terminal domain 1 GCD22_00984 PF13089 Polyphosphate kinase N-terminal domain GCD22_00984 PF13090 Polyphosphate kinase C-terminal domain 2 GCD22_00985 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GCD22_00985 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GCD22_00988 PF02321 Outer membrane efflux protein GCD22_00990 PF02545 Maf-like protein GCD22_00991 PF00311 Phosphoenolpyruvate carboxylase GCD22_00992 PF17209 Hfq protein GCD22_00993 PF13167 GTP-binding GTPase N-terminal GCD22_00993 PF01926 50S ribosome-binding GTPase GCD22_00993 PF16360 GTP-binding GTPase Middle Region GCD22_00994 PF12221 Bacterial membrane protein N terminal GCD22_00994 PF01145 SPFH domain / Band 7 family GCD22_00996 PF13393 Histidyl-tRNA synthetase GCD22_00997 PF00709 Adenylosuccinate synthetase GCD22_00999 PF00773 RNB domain GCD22_00999 PF08461 Ribonuclease R winged-helix domain GCD22_00999 PF17876 Cold shock domain GCD22_00999 PF08206 Ribonuclease B OB domain GCD22_01003 PF04403 Paraquat-inducible protein A GCD22_01004 PF00990 Diguanylate cyclase, GGDEF domain GCD22_01004 PF03707 Bacterial signalling protein N terminal repeat GCD22_01004 PF00563 EAL domain GCD22_01007 PF01343 Peptidase family S49 GCD22_01007 PF08496 Peptidase family S49 N-terminal GCD22_01008 PF02597 ThiS family GCD22_01009 PF02391 MoaE protein GCD22_01011 PF08669 Glycine cleavage T-protein C-terminal barrel domain GCD22_01011 PF01571 Aminomethyltransferase folate-binding domain GCD22_01012 PF01597 Glycine cleavage H-protein GCD22_01013 PF02347 Glycine cleavage system P-protein GCD22_01014 PF02347 Glycine cleavage system P-protein GCD22_01015 PF07726 ATPase family associated with various cellular activities (AAA) GCD22_01015 PF17863 AAA lid domain GCD22_01018 PF00664 ABC transporter transmembrane region GCD22_01018 PF00005 ABC transporter GCD22_01019 PF11953 Domain of unknown function (DUF3470) GCD22_01019 PF00037 4Fe-4S binding domain GCD22_01020 PF00578 AhpC/TSA family GCD22_01020 PF10417 C-terminal domain of 1-Cys peroxiredoxin GCD22_01023 PF01594 AI-2E family transporter GCD22_01026 PF00588 SpoU rRNA Methylase family GCD22_01026 PF08032 RNA 2'-O ribose methyltransferase substrate binding GCD22_01027 PF01026 TatD related DNase GCD22_01028 PF03099 Biotin/lipoate A/B protein ligase family GCD22_01028 PF12706 Beta-lactamase superfamily domain GCD22_01031 PF00005 ABC transporter GCD22_01031 PF00664 ABC transporter transmembrane region GCD22_01032 PF00005 ABC transporter GCD22_01032 PF00664 ABC transporter transmembrane region GCD22_01035 PF02910 Fumarate reductase flavoprotein C-term GCD22_01035 PF00890 FAD binding domain GCD22_01036 PF08281 Sigma-70, region 4 GCD22_01036 PF04542 Sigma-70 region 2 GCD22_01039 PF00009 Elongation factor Tu GTP binding domain GCD22_01039 PF03144 Elongation factor Tu domain 2 GCD22_01039 PF06421 GTP-binding protein LepA C-terminus GCD22_01039 PF00679 Elongation factor G C-terminus GCD22_01040 PF10502 Signal peptidase, peptidase S26 GCD22_01043 PF00035 Double-stranded RNA binding motif GCD22_01043 PF14622 Ribonuclease-III-like GCD22_01044 PF01926 50S ribosome-binding GTPase GCD22_01044 PF07650 KH domain GCD22_01045 PF11967 Recombination protein O N terminal GCD22_01045 PF02565 Recombination protein O C terminal GCD22_01046 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GCD22_01047 PF01648 4'-phosphopantetheinyl transferase superfamily GCD22_01048 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GCD22_01048 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GCD22_01048 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GCD22_01049 PF00294 pfkB family carbohydrate kinase GCD22_01050 PF01171 PP-loop family GCD22_01051 PF01430 Hsp33 protein GCD22_01058 PF01783 Ribosomal L32p protein family GCD22_01059 PF02504 Fatty acid synthesis protein GCD22_01060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GCD22_01060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GCD22_01061 PF00698 Acyl transferase domain GCD22_01063 PF00550 Phosphopantetheine attachment site GCD22_01064 PF02801 Beta-ketoacyl synthase, C-terminal domain GCD22_01064 PF00109 Beta-ketoacyl synthase, N-terminal domain GCD22_01065 PF01063 Amino-transferase class IV GCD22_01066 PF02618 YceG-like family GCD22_01067 PF02223 Thymidylate kinase GCD22_01068 PF09115 DNA polymerase III, delta subunit, C terminal GCD22_01075 PF13091 PLD-like domain GCD22_01075 PF13396 Phospholipase_D-nuclease N-terminal GCD22_01077 PF00011 Hsp20/alpha crystallin family GCD22_01091 PF01292 Prokaryotic cytochrome b561 GCD22_01095 PF04349 Periplasmic glucan biosynthesis protein, MdoG GCD22_01105 PF00529 HlyD membrane-fusion protein of T1SS GCD22_01105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCD22_01106 PF02321 Outer membrane efflux protein GCD22_01108 PF07690 Major Facilitator Superfamily GCD22_01112 PF12170 DNA polymerase III tau subunit V interacting with alpha GCD22_01112 PF12169 DNA polymerase III subunits gamma and tau domain III GCD22_01112 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GCD22_01114 PF02132 RecR protein GCD22_01114 PF13662 Toprim domain GCD22_01116 PF01256 Carbohydrate kinase GCD22_01116 PF03853 YjeF-related protein N-terminus GCD22_01117 PF00202 Aminotransferase class-III GCD22_01119 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GCD22_01120 PF08676 MutL C terminal dimerisation domain GCD22_01120 PF01119 DNA mismatch repair protein, C-terminal domain GCD22_01122 PF02321 Outer membrane efflux protein GCD22_01123 PF04632 Fusaric acid resistance protein family GCD22_01125 PF00529 HlyD membrane-fusion protein of T1SS GCD22_01125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCD22_01126 PF00334 Nucleoside diphosphate kinase GCD22_01127 PF04055 Radical SAM superfamily GCD22_01128 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) GCD22_01130 PF04551 GcpE protein GCD22_01131 PF03129 Anticodon binding domain GCD22_01131 PF13393 Histidyl-tRNA synthetase GCD22_01134 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GCD22_01134 PF01926 50S ribosome-binding GTPase GCD22_01138 PF12849 PBP superfamily domain GCD22_01139 PF00528 Binding-protein-dependent transport system inner membrane component GCD22_01140 PF00528 Binding-protein-dependent transport system inner membrane component GCD22_01145 PF01979 Amidohydrolase family GCD22_01147 PF07015 VirC1 protein GCD22_01151 PF00488 MutS domain V GCD22_01151 PF05190 MutS family domain IV GCD22_01151 PF01624 MutS domain I GCD22_01151 PF05192 MutS domain III GCD22_01151 PF05188 MutS domain II GCD22_01155 PF00488 MutS domain V GCD22_01155 PF01713 Smr domain GCD22_01156 PF02913 FAD linked oxidases, C-terminal domain GCD22_01156 PF01565 FAD binding domain GCD22_01157 PF02569 Pantoate-beta-alanine ligase GCD22_01158 PF02548 Ketopantoate hydroxymethyltransferase GCD22_01160 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GCD22_01161 PF01966 HD domain GCD22_01161 PF01743 Poly A polymerase head domain GCD22_01161 PF12627 Probable RNA and SrmB- binding site of polymerase A GCD22_01162 PF12627 Probable RNA and SrmB- binding site of polymerase A GCD22_01162 PF12626 Polymerase A arginine-rich C-terminus GCD22_01162 PF01743 Poly A polymerase head domain GCD22_01167 PF00571 CBS domain GCD22_01167 PF00478 IMP dehydrogenase / GMP reductase domain GCD22_01168 PF02540 NAD synthase GCD22_01168 PF00117 Glutamine amidotransferase class-I GCD22_01168 PF00958 GMP synthase C terminal domain GCD22_01170 PF00696 Amino acid kinase family GCD22_01170 PF01472 PUA domain GCD22_01175 PF06508 Queuosine biosynthesis protein QueC GCD22_01176 PF01300 Telomere recombination GCD22_01177 PF02163 Peptidase family M50 GCD22_01178 PF00579 tRNA synthetases class I (W and Y) GCD22_01179 PF02616 Segregation and condensation protein ScpA GCD22_01180 PF04079 Segregation and condensation complex subunit ScpB GCD22_01182 PF01479 S4 domain GCD22_01182 PF00849 RNA pseudouridylate synthase GCD22_01185 PF05227 CHASE3 domain GCD22_01185 PF00672 HAMP domain GCD22_01185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GCD22_01186 PF01584 CheW-like domain GCD22_01186 PF00072 Response regulator receiver domain GCD22_01187 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GCD22_01187 PF00672 HAMP domain GCD22_01187 PF12729 Four helix bundle sensory module for signal transduction GCD22_01191 PF01627 Hpt domain GCD22_01191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_01191 PF01584 CheW-like domain GCD22_01191 PF02895 Signal transducing histidine kinase, homodimeric domain GCD22_01191 PF07194 P2 response regulator binding domain GCD22_01193 PF00072 Response regulator receiver domain GCD22_01194 PF13677 Membrane MotB of proton-channel complex MotA/MotB GCD22_01194 PF00691 OmpA family GCD22_01196 PF02623 FliW protein GCD22_01197 PF02599 Global regulator protein family GCD22_01201 PF00460 Flagella basal body rod protein GCD22_01202 PF00460 Flagella basal body rod protein GCD22_01202 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GCD22_01203 PF13861 FlgD Tudor-like domain GCD22_01203 PF13860 FlgD Ig-like domain GCD22_01203 PF03963 Flagellar hook capping protein - N-terminal region GCD22_01204 PF07559 Flagellar basal body protein FlaE GCD22_01204 PF00460 Flagella basal body rod protein GCD22_01204 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GCD22_01205 PF00460 Flagella basal body rod protein GCD22_01205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GCD22_01206 PF00460 Flagella basal body rod protein GCD22_01206 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GCD22_01207 PF02107 Flagellar L-ring protein GCD22_01208 PF02119 Flagellar P-ring protein GCD22_01209 PF10135 Rod binding protein GCD22_01209 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GCD22_01211 PF00460 Flagella basal body rod protein GCD22_01211 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GCD22_01212 PF00669 Bacterial flagellin N-terminal helical region GCD22_01216 PF00700 Bacterial flagellin C-terminal helical region GCD22_01216 PF00669 Bacterial flagellin N-terminal helical region GCD22_01217 PF00700 Bacterial flagellin C-terminal helical region GCD22_01217 PF00669 Bacterial flagellin N-terminal helical region GCD22_01217 PF07196 Flagellin hook IN motif GCD22_01218 PF00669 Bacterial flagellin N-terminal helical region GCD22_01218 PF00700 Bacterial flagellin C-terminal helical region GCD22_01221 PF02561 Flagellar protein FliS GCD22_01223 PF00158 Sigma-54 interaction domain GCD22_01223 PF02954 Bacterial regulatory protein, Fis family GCD22_01223 PF01590 GAF domain GCD22_01224 PF00512 His Kinase A (phospho-acceptor) domain GCD22_01224 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_01224 PF00989 PAS fold GCD22_01225 PF02954 Bacterial regulatory protein, Fis family GCD22_01225 PF00158 Sigma-54 interaction domain GCD22_01225 PF00072 Response regulator receiver domain GCD22_01226 PF02049 Flagellar hook-basal body complex protein FliE GCD22_01227 PF08345 Flagellar M-ring protein C-terminal GCD22_01227 PF01514 Secretory protein of YscJ/FliF family GCD22_01228 PF01706 FliG C-terminal domain GCD22_01228 PF14841 FliG middle domain GCD22_01228 PF14842 FliG N-terminal domain GCD22_01230 PF18269 T3SS EscN ATPase C-terminal domain GCD22_01230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GCD22_01233 PF02154 Flagellar motor switch protein FliM GCD22_01233 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GCD22_01234 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GCD22_01235 PF04347 Flagellar biosynthesis protein, FliO GCD22_01236 PF00813 FliP family GCD22_01237 PF01313 Bacterial export proteins, family 3 GCD22_01238 PF01311 Bacterial export proteins, family 1 GCD22_01240 PF01311 Bacterial export proteins, family 1 GCD22_01241 PF01312 FlhB HrpN YscU SpaS Family GCD22_01242 PF00771 FHIPEP family GCD22_01243 PF00448 SRP54-type protein, GTPase domain GCD22_01244 PF10609 NUBPL iron-transfer P-loop NTPase GCD22_01245 PF04545 Sigma-70, region 4 GCD22_01245 PF04539 Sigma-70 region 3 GCD22_01245 PF04542 Sigma-70 region 2 GCD22_01246 PF01618 MotA/TolQ/ExbB proton channel family GCD22_01248 PF00990 Diguanylate cyclase, GGDEF domain GCD22_01250 PF07694 5TMR of 5TMR-LYT GCD22_01250 PF00990 Diguanylate cyclase, GGDEF domain GCD22_01253 PF01618 MotA/TolQ/ExbB proton channel family GCD22_01254 PF13677 Membrane MotB of proton-channel complex MotA/MotB GCD22_01254 PF00691 OmpA family GCD22_01255 PF00990 Diguanylate cyclase, GGDEF domain GCD22_01255 PF00072 Response regulator receiver domain GCD22_01257 PF00563 EAL domain GCD22_01257 PF08668 HDOD domain GCD22_01258 PF01339 CheB methylesterase GCD22_01258 PF00072 Response regulator receiver domain GCD22_01262 PF01312 FlhB HrpN YscU SpaS Family GCD22_01265 PF04356 Protein of unknown function (DUF489) GCD22_01266 PF01909 Nucleotidyltransferase domain GCD22_01266 PF08335 GlnD PII-uridylyltransferase GCD22_01266 PF01842 ACT domain GCD22_01266 PF01966 HD domain GCD22_01267 PF00557 Metallopeptidase family M24 GCD22_01268 PF03749 Sugar fermentation stimulation protein RE domain GCD22_01268 PF17746 SfsA N-terminal OB domain GCD22_01269 PF00749 tRNA synthetases class I (E and Q), catalytic domain GCD22_01270 PF02769 AIR synthase related protein, C-terminal domain GCD22_01270 PF00586 AIR synthase related protein, N-terminal domain GCD22_01271 PF04608 Phosphatidylglycerophosphatase A GCD22_01273 PF00154 recA bacterial DNA recombination protein GCD22_01274 PF02631 RecX family GCD22_01275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GCD22_01275 PF02272 DHHA1 domain GCD22_01275 PF01411 tRNA synthetases class II (A) GCD22_01278 PF04545 Sigma-70, region 4 GCD22_01278 PF04542 Sigma-70 region 2 GCD22_01283 PF14718 Soluble lytic murein transglycosylase L domain GCD22_01283 PF01464 Transglycosylase SLT domain GCD22_01287 PF00176 SNF2 family N-terminal domain GCD22_01287 PF00271 Helicase conserved C-terminal domain GCD22_01287 PF12419 SNF2 Helicase protein GCD22_01288 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GCD22_01288 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GCD22_01288 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GCD22_01288 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GCD22_01290 PF00005 ABC transporter GCD22_01290 PF12848 ABC transporter GCD22_01291 PF13667 ThiC-associated domain GCD22_01291 PF01964 Radical SAM ThiC family GCD22_01294 PF01654 Cytochrome bd terminal oxidase subunit I GCD22_01295 PF04273 Putative phosphatase (DUF442) GCD22_01295 PF00753 Metallo-beta-lactamase superfamily GCD22_01297 PF02954 Bacterial regulatory protein, Fis family GCD22_01297 PF00072 Response regulator receiver domain GCD22_01297 PF00158 Sigma-54 interaction domain GCD22_01298 PF02230 Phospholipase/Carboxylesterase GCD22_01300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GCD22_01300 PF07992 Pyridine nucleotide-disulphide oxidoreductase GCD22_01302 PF04349 Periplasmic glucan biosynthesis protein, MdoG GCD22_01307 PF04241 Protein of unknown function (DUF423) GCD22_01309 PF00083 Sugar (and other) transporter GCD22_01310 PF01676 Metalloenzyme superfamily GCD22_01310 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GCD22_01311 PF02896 PEP-utilising enzyme, TIM barrel domain GCD22_01311 PF00391 PEP-utilising enzyme, mobile domain GCD22_01311 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GCD22_01314 PF00551 Formyl transferase GCD22_01315 PF02769 AIR synthase related protein, C-terminal domain GCD22_01315 PF00586 AIR synthase related protein, N-terminal domain GCD22_01316 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GCD22_01316 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GCD22_01318 PF00308 Bacterial dnaA protein GCD22_01318 PF11638 DnaA N-terminal domain GCD22_01318 PF08299 Bacterial dnaA protein helix-turn-helix GCD22_01319 PF03631 Virulence factor BrkB GCD22_01321 PF00591 Glycosyl transferase family, a/b domain GCD22_01321 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GCD22_01322 PF06299 Protein of unknown function (DUF1045) GCD22_01323 PF07969 Amidohydrolase family GCD22_01324 PF00005 ABC transporter GCD22_01325 PF00005 ABC transporter GCD22_01326 PF06007 Phosphonate metabolism protein PhnJ GCD22_01327 PF05861 Bacterial phosphonate metabolism protein (PhnI) GCD22_01328 PF05845 Bacterial phosphonate metabolism protein (PhnH) GCD22_01330 PF00083 Sugar (and other) transporter GCD22_01333 PF04185 Phosphoesterase family GCD22_01333 PF05506 Domain of unknown function (DUF756) GCD22_01336 PF02472 Biopolymer transport protein ExbD/TolR GCD22_01343 PF01545 Cation efflux family GCD22_01347 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GCD22_01348 PF14489 QueF-like protein GCD22_01349 PF02463 RecF/RecN/SMC N terminal domain GCD22_01349 PF06470 SMC proteins Flexible Hinge Domain GCD22_01352 PF02517 CPBP intramembrane metalloprotease GCD22_01353 PF13732 Domain of unknown function (DUF4162) GCD22_01353 PF00005 ABC transporter GCD22_01355 PF03120 NAD-dependent DNA ligase OB-fold domain GCD22_01355 PF00533 BRCA1 C Terminus (BRCT) domain GCD22_01355 PF01653 NAD-dependent DNA ligase adenylation domain GCD22_01355 PF12826 Helix-hairpin-helix motif GCD22_01355 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GCD22_01356 PF00691 OmpA family GCD22_01358 PF07690 Major Facilitator Superfamily GCD22_01359 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GCD22_01360 PF00905 Penicillin binding protein transpeptidase domain GCD22_01360 PF03717 Penicillin-binding Protein dimerisation domain GCD22_01361 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system GCD22_01363 PF00578 AhpC/TSA family GCD22_01364 PF13638 PIN domain GCD22_01364 PF02562 PhoH-like protein GCD22_01365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GCD22_01365 PF17944 Arginine decarboxylase C-terminal helical extension GCD22_01365 PF17810 Arginine decarboxylase helical bundle domain GCD22_01375 PF00862 Sucrose synthase GCD22_01375 PF00534 Glycosyl transferases group 1 GCD22_01377 PF01037 Lrp/AsnC ligand binding domain GCD22_01379 PF08502 LeuA allosteric (dimerisation) domain GCD22_01379 PF00682 HMGL-like GCD22_01380 PF01925 Sulfite exporter TauE/SafE GCD22_01383 PF00690 Cation transporter/ATPase, N-terminus GCD22_01383 PF00689 Cation transporting ATPase, C-terminus GCD22_01384 PF00149 Calcineurin-like phosphoesterase GCD22_01386 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GCD22_01387 PF13742 OB-fold nucleic acid binding domain GCD22_01387 PF02601 Exonuclease VII, large subunit GCD22_01388 PF00085 Thioredoxin GCD22_01392 PF07690 Major Facilitator Superfamily GCD22_01393 PF02609 Exonuclease VII small subunit GCD22_01394 PF00348 Polyprenyl synthetase GCD22_01395 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GCD22_01395 PF02780 Transketolase, C-terminal domain GCD22_01395 PF02779 Transketolase, pyrimidine binding domain GCD22_01396 PF02649 Type I GTP cyclohydrolase folE2 GCD22_01397 PF01264 Chorismate synthase GCD22_01399 PF10431 C-terminal, D2-small domain, of ClpB protein GCD22_01399 PF17871 AAA lid domain GCD22_01399 PF02861 Clp amino terminal domain, pathogenicity island component GCD22_01399 PF07724 AAA domain (Cdc48 subfamily) GCD22_01399 PF00004 ATPase family associated with various cellular activities (AAA) GCD22_01400 PF13193 AMP-binding enzyme C-terminal domain GCD22_01400 PF00501 AMP-binding enzyme GCD22_01400 PF16177 Acetyl-coenzyme A synthetase N-terminus GCD22_01401 PF00999 Sodium/hydrogen exchanger family GCD22_01401 PF02080 TrkA-C domain GCD22_01401 PF02254 TrkA-N domain GCD22_01402 PF01370 NAD dependent epimerase/dehydratase family GCD22_01403 PF01370 NAD dependent epimerase/dehydratase family GCD22_01412 PF01103 Surface antigen GCD22_01412 PF07244 Surface antigen variable number repeat GCD22_01412 PF17243 POTRA domain TamA domain 1 GCD22_01414 PF01266 FAD dependent oxidoreductase GCD22_01418 PF00795 Carbon-nitrogen hydrolase GCD22_01419 PF13098 Thioredoxin-like domain GCD22_01421 PF05114 Protein of unknown function (DUF692) GCD22_01425 PF11412 Disulphide bond corrector protein DsbC GCD22_01425 PF02683 Cytochrome C biogenesis protein transmembrane region GCD22_01428 PF07690 Major Facilitator Superfamily GCD22_01430 PF00581 Rhodanese-like domain GCD22_01430 PF00753 Metallo-beta-lactamase superfamily GCD22_01434 PF01209 ubiE/COQ5 methyltransferase family GCD22_01437 PF01022 Bacterial regulatory protein, arsR family GCD22_01440 PF01906 Putative heavy-metal-binding GCD22_01461 PF04403 Paraquat-inducible protein A GCD22_01468 PF01654 Cytochrome bd terminal oxidase subunit I GCD22_01473 PF01597 Glycine cleavage H-protein GCD22_01474 PF00654 Voltage gated chloride channel GCD22_01480 PF03466 LysR substrate binding domain GCD22_01480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_01482 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_01482 PF03466 LysR substrate binding domain GCD22_01483 PF04055 Radical SAM superfamily GCD22_01483 PF06463 Molybdenum Cofactor Synthesis C GCD22_01488 PF04976 DMSO reductase anchor subunit (DmsC) GCD22_01489 PF12800 4Fe-4S binding domain GCD22_01489 PF13247 4Fe-4S dicluster domain GCD22_01490 PF01568 Molydopterin dinucleotide binding domain GCD22_01490 PF00384 Molybdopterin oxidoreductase GCD22_01490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GCD22_01501 PF04285 Protein of unknown function (DUF444) GCD22_01510 PF12323 Helix-turn-helix domain GCD22_01510 PF07282 Putative transposase DNA-binding domain GCD22_01510 PF01385 Probable transposase GCD22_01541 PF08721 TnsA endonuclease C terminal GCD22_01541 PF08722 TnsA endonuclease N terminal GCD22_01542 PF00665 Integrase core domain GCD22_01543 PF13401 AAA domain GCD22_01543 PF11426 Tn7 transposition regulator TnsC GCD22_01544 PF00872 Transposase, Mutator family GCD22_01545 PF15978 Tn7-like transposition protein D GCD22_01545 PF06527 TniQ GCD22_01546 PF18623 TnsE C-terminal domain GCD22_01548 PF04545 Sigma-70, region 4 GCD22_01548 PF04542 Sigma-70 region 2 GCD22_01548 PF00140 Sigma-70 factor, region 1.2 GCD22_01548 PF04539 Sigma-70 region 3 GCD22_01553 PF01568 Molydopterin dinucleotide binding domain GCD22_01553 PF14710 Respiratory nitrate reductase alpha N-terminal GCD22_01553 PF00384 Molybdopterin oxidoreductase GCD22_01554 PF14711 Respiratory nitrate reductase beta C-terminal GCD22_01554 PF13247 4Fe-4S dicluster domain GCD22_01555 PF02665 Nitrate reductase gamma subunit GCD22_01555 PF00384 Molybdopterin oxidoreductase GCD22_01555 PF02613 Nitrate reductase delta subunit GCD22_01556 PF02665 Nitrate reductase gamma subunit GCD22_01557 PF07690 Major Facilitator Superfamily GCD22_01561 PF00175 Oxidoreductase NAD-binding domain GCD22_01561 PF00042 Globin GCD22_01561 PF00970 Oxidoreductase FAD-binding domain GCD22_01562 PF00970 Oxidoreductase FAD-binding domain GCD22_01562 PF00111 2Fe-2S iron-sulfur cluster binding domain GCD22_01562 PF00175 Oxidoreductase NAD-binding domain GCD22_01565 PF01597 Glycine cleavage H-protein GCD22_01567 PF04343 Protein of unknown function, DUF488 GCD22_01573 PF04542 Sigma-70 region 2 GCD22_01573 PF04539 Sigma-70 region 3 GCD22_01573 PF00140 Sigma-70 factor, region 1.2 GCD22_01573 PF04545 Sigma-70, region 4 GCD22_01579 PF02627 Carboxymuconolactone decarboxylase family GCD22_01580 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain GCD22_01580 PF00730 HhH-GPD superfamily base excision DNA repair protein GCD22_01583 PF11953 Domain of unknown function (DUF3470) GCD22_01583 PF00037 4Fe-4S binding domain GCD22_01590 PF04542 Sigma-70 region 2 GCD22_01590 PF00140 Sigma-70 factor, region 1.2 GCD22_01590 PF04539 Sigma-70 region 3 GCD22_01590 PF04545 Sigma-70, region 4 GCD22_01592 PF03466 LysR substrate binding domain GCD22_01592 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_01594 PF00342 Phosphoglucose isomerase GCD22_01597 PF07282 Putative transposase DNA-binding domain GCD22_01597 PF01385 Probable transposase GCD22_01597 PF12323 Helix-turn-helix domain GCD22_01598 PF07282 Putative transposase DNA-binding domain GCD22_01598 PF01385 Probable transposase GCD22_01598 PF12323 Helix-turn-helix domain GCD22_01603 PF00986 DNA gyrase B subunit, carboxyl terminus GCD22_01603 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_01603 PF00204 DNA gyrase B GCD22_01603 PF01751 Toprim domain GCD22_01617 PF13651 Adenine-specific methyltransferase EcoRI GCD22_01628 PF00270 DEAD/DEAH box helicase GCD22_01628 PF00271 Helicase conserved C-terminal domain GCD22_01628 PF08148 DSHCT (NUC185) domain GCD22_01637 PF00149 Calcineurin-like phosphoesterase GCD22_01648 PF01555 DNA methylase GCD22_01656 PF04545 Sigma-70, region 4 GCD22_01656 PF04539 Sigma-70 region 3 GCD22_01656 PF00140 Sigma-70 factor, region 1.2 GCD22_01656 PF04542 Sigma-70 region 2 GCD22_01657 PF00313 'Cold-shock' DNA-binding domain GCD22_01658 PF00437 Type II/IV secretion system protein GCD22_01658 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GCD22_01659 PF11741 AMIN domain GCD22_01659 PF00263 Bacterial type II and III secretion system protein GCD22_01659 PF07660 Secretin and TonB N terminus short domain GCD22_01659 PF03958 Bacterial type II/III secretion system short domain GCD22_01671 PF00114 Pilin (bacterial filament) GCD22_01671 PF07963 Prokaryotic N-terminal methylation motif GCD22_01673 PF00482 Type II secretion system (T2SS), protein F GCD22_01679 PF05567 Neisseria PilC beta-propeller domain GCD22_01694 PF00672 HAMP domain GCD22_01694 PF00563 EAL domain GCD22_01694 PF17154 Gammaproteobacterial periplasmic sensor domain GCD22_01694 PF00990 Diguanylate cyclase, GGDEF domain GCD22_01697 PF00497 Bacterial extracellular solute-binding proteins, family 3 GCD22_01697 PF01464 Transglycosylase SLT domain GCD22_01701 PF00437 Type II/IV secretion system protein GCD22_01707 PF17768 RecJ OB domain GCD22_01707 PF02272 DHHA1 domain GCD22_01707 PF01368 DHH family GCD22_01710 PF01022 Bacterial regulatory protein, arsR family GCD22_01713 PF01209 ubiE/COQ5 methyltransferase family GCD22_01717 PF00753 Metallo-beta-lactamase superfamily GCD22_01717 PF00581 Rhodanese-like domain GCD22_01719 PF07690 Major Facilitator Superfamily GCD22_01722 PF02683 Cytochrome C biogenesis protein transmembrane region GCD22_01722 PF11412 Disulphide bond corrector protein DsbC GCD22_01726 PF05114 Protein of unknown function (DUF692) GCD22_01729 PF13098 Thioredoxin-like domain GCD22_01730 PF00795 Carbon-nitrogen hydrolase GCD22_01731 PF00795 Carbon-nitrogen hydrolase GCD22_01747 PF00665 Integrase core domain GCD22_01748 PF01695 IstB-like ATP binding protein GCD22_01754 PF13808 DDE_Tnp_1-associated GCD22_01754 PF01609 Transposase DDE domain GCD22_01755 PF00589 Phage integrase family GCD22_01755 PF02899 Phage integrase, N-terminal SAM-like domain GCD22_01758 PF01541 GIY-YIG catalytic domain GCD22_01763 PF07690 Major Facilitator Superfamily GCD22_01765 PF03972 MmgE/PrpD family GCD22_01766 PF13276 HTH-like domain GCD22_01766 PF00665 Integrase core domain GCD22_01767 PF03466 LysR substrate binding domain GCD22_01767 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_01768 PF03472 Autoinducer binding domain GCD22_01768 PF00196 Bacterial regulatory proteins, luxR family GCD22_01770 PF17191 RecG wedge domain GCD22_01770 PF00271 Helicase conserved C-terminal domain GCD22_01770 PF00270 DEAD/DEAH box helicase GCD22_01773 PF07669 Eco57I restriction-modification methylase GCD22_01780 PF01555 DNA methylase GCD22_01782 PF00580 UvrD/REP helicase N-terminal domain GCD22_01782 PF13361 UvrD-like helicase C-terminal domain GCD22_01791 PF00158 Sigma-54 interaction domain GCD22_01791 PF00072 Response regulator receiver domain GCD22_01791 PF02954 Bacterial regulatory protein, Fis family GCD22_01792 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal GCD22_01792 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GCD22_01793 PF00374 Nickel-dependent hydrogenase GCD22_01801 PF01106 NifU-like domain GCD22_01803 PF17788 HypF Kae1-like domain GCD22_01803 PF00708 Acylphosphatase GCD22_01803 PF01300 Telomere recombination GCD22_01803 PF07503 HypF finger GCD22_01804 PF01455 HupF/HypC family GCD22_01805 PF13580 SIS domain GCD22_01806 PF01924 Hydrogenase formation hypA family GCD22_01807 PF02769 AIR synthase related protein, C-terminal domain GCD22_01807 PF00586 AIR synthase related protein, N-terminal domain GCD22_01808 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GCD22_01809 PF02492 CobW/HypB/UreG, nucleotide-binding domain GCD22_01825 PF07282 Putative transposase DNA-binding domain GCD22_01825 PF12323 Helix-turn-helix domain GCD22_01825 PF01385 Probable transposase GCD22_01835 PF13808 DDE_Tnp_1-associated GCD22_01835 PF01609 Transposase DDE domain GCD22_01840 PF02384 N-6 DNA Methylase GCD22_01858 PF00216 Bacterial DNA-binding protein GCD22_01875 PF00437 Type II/IV secretion system protein GCD22_01879 PF03135 CagE, TrbE, VirB family, component of type IV transporter system GCD22_01890 PF03743 Bacterial conjugation TrbI-like protein GCD22_01893 PF00263 Bacterial type II and III secretion system protein GCD22_01893 PF04972 BON domain GCD22_01893 PF13629 Pilus formation protein N terminal region GCD22_01896 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GCD22_01896 PF00437 Type II/IV secretion system protein GCD22_01902 PF13361 UvrD-like helicase C-terminal domain GCD22_01902 PF00580 UvrD/REP helicase N-terminal domain GCD22_01906 PF00436 Single-strand binding protein family GCD22_01910 PF07282 Putative transposase DNA-binding domain GCD22_01910 PF01385 Probable transposase GCD22_01910 PF12323 Helix-turn-helix domain GCD22_01948 PF00268 Ribonucleotide reductase, small chain GCD22_01954 PF17762 HTH domain found in ParB protein GCD22_01954 PF02195 ParB-like nuclease domain GCD22_01973 PF02867 Ribonucleotide reductase, barrel domain GCD22_01973 PF00317 Ribonucleotide reductase, all-alpha domain GCD22_01973 PF03477 ATP cone domain GCD22_01996 PF00589 Phage integrase family GCD22_02000 PF03466 LysR substrate binding domain GCD22_02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_02001 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GCD22_02001 PF00361 Proton-conducting membrane transporter GCD22_02009 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GCD22_02009 PF07992 Pyridine nucleotide-disulphide oxidoreductase GCD22_02009 PF00403 Heavy-metal-associated domain GCD22_02011 PF00376 MerR family regulatory protein GCD22_02011 PF09278 MerR, DNA binding GCD22_02019 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GCD22_02019 PF02896 PEP-utilising enzyme, TIM barrel domain GCD22_02019 PF00391 PEP-utilising enzyme, mobile domain GCD22_02020 PF00872 Transposase, Mutator family GCD22_02021 PF01925 Sulfite exporter TauE/SafE GCD22_02029 PF07690 Major Facilitator Superfamily GCD22_02038 PF00482 Type II secretion system (T2SS), protein F GCD22_02039 PF00114 Pilin (bacterial filament) GCD22_02039 PF07963 Prokaryotic N-terminal methylation motif GCD22_02047 PF07804 HipA-like C-terminal domain GCD22_02048 PF08681 Protein of unknown function (DUF1778) GCD22_02057 PF00005 ABC transporter GCD22_02058 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCD22_02059 PF02321 Outer membrane efflux protein GCD22_02062 PF08281 Sigma-70, region 4 GCD22_02062 PF04542 Sigma-70 region 2 GCD22_02066 PF02322 Cytochrome bd terminal oxidase subunit II GCD22_02067 PF01654 Cytochrome bd terminal oxidase subunit I GCD22_02069 PF01381 Helix-turn-helix GCD22_02070 PF07992 Pyridine nucleotide-disulphide oxidoreductase GCD22_02070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GCD22_02074 PF00676 Dehydrogenase E1 component GCD22_02075 PF02779 Transketolase, pyrimidine binding domain GCD22_02075 PF02780 Transketolase, C-terminal domain GCD22_02076 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GCD22_02076 PF00364 Biotin-requiring enzyme GCD22_02076 PF02817 e3 binding domain GCD22_02077 PF00871 Acetokinase family GCD22_02078 PF01515 Phosphate acetyl/butaryl transferase GCD22_02079 PF00294 pfkB family carbohydrate kinase GCD22_02081 PF00391 PEP-utilising enzyme, mobile domain GCD22_02081 PF02887 Pyruvate kinase, alpha/beta domain GCD22_02081 PF00224 Pyruvate kinase, barrel domain GCD22_02082 PF00113 Enolase, C-terminal TIM barrel domain GCD22_02082 PF03952 Enolase, N-terminal domain GCD22_02084 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GCD22_02084 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GCD22_02085 PF00083 Sugar (and other) transporter GCD22_02088 PF13545 Crp-like helix-turn-helix domain GCD22_02088 PF00027 Cyclic nucleotide-binding domain GCD22_02091 PF01654 Cytochrome bd terminal oxidase subunit I GCD22_02093 PF03976 Polyphosphate kinase 2 (PPK2) GCD22_02096 PF11897 Protein of unknown function (DUF3417) GCD22_02096 PF00343 Carbohydrate phosphorylase GCD22_02098 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) GCD22_02103 PF00990 Diguanylate cyclase, GGDEF domain GCD22_02103 PF08448 PAS fold GCD22_02105 PF14145 YrhK-like protein GCD22_02107 PF00521 DNA gyrase/topoisomerase IV, subunit A GCD22_02108 PF00204 DNA gyrase B GCD22_02108 PF00986 DNA gyrase B subunit, carboxyl terminus GCD22_02108 PF01751 Toprim domain GCD22_02108 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_02109 PF00534 Glycosyl transferases group 1 GCD22_02109 PF13439 Glycosyltransferase Family 4 GCD22_02112 PF00483 Nucleotidyl transferase GCD22_02113 PF00483 Nucleotidyl transferase GCD22_02115 PF13419 Haloacid dehalogenase-like hydrolase GCD22_02116 PF01258 Prokaryotic dksA/traR C4-type zinc finger GCD22_02117 PF01171 PP-loop family GCD22_02117 PF09179 TilS substrate binding domain GCD22_02117 PF11734 TilS substrate C-terminal domain GCD22_02118 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GCD22_02119 PF14579 Helix-hairpin-helix motif GCD22_02119 PF01336 OB-fold nucleic acid binding domain GCD22_02119 PF07733 Bacterial DNA polymerase III alpha NTPase domain GCD22_02119 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GCD22_02119 PF02811 PHP domain GCD22_02120 PF01351 Ribonuclease HII GCD22_02121 PF02684 Lipid-A-disaccharide synthetase GCD22_02122 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GCD22_02124 PF00132 Bacterial transferase hexapeptide (six repeats) GCD22_02124 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GCD22_02125 PF07977 FabA-like domain GCD22_02126 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GCD22_02126 PF14602 Hexapeptide repeat of succinyl-transferase GCD22_02126 PF00132 Bacterial transferase hexapeptide (six repeats) GCD22_02128 PF01103 Surface antigen GCD22_02128 PF07244 Surface antigen variable number repeat GCD22_02129 PF17820 PDZ domain GCD22_02129 PF02163 Peptidase family M50 GCD22_02130 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GCD22_02130 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GCD22_02130 PF13288 DXP reductoisomerase C-terminal domain GCD22_02132 PF01255 Putative undecaprenyl diphosphate synthase GCD22_02133 PF01765 Ribosome recycling factor GCD22_02134 PF00696 Amino acid kinase family GCD22_02135 PF00889 Elongation factor TS GCD22_02136 PF00318 Ribosomal protein S2 GCD22_02138 PF02541 Ppx/GppA phosphatase family GCD22_02139 PF01895 PhoU domain GCD22_02140 PF00005 ABC transporter GCD22_02141 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_02141 PF00512 His Kinase A (phospho-acceptor) domain GCD22_02141 PF00989 PAS fold GCD22_02141 PF11808 Phosphate regulon sensor protein PhoR GCD22_02142 PF00486 Transcriptional regulatory protein, C terminal GCD22_02142 PF00072 Response regulator receiver domain GCD22_02143 PF00271 Helicase conserved C-terminal domain GCD22_02143 PF00270 DEAD/DEAH box helicase GCD22_02144 PF00248 Aldo/keto reductase family GCD22_02147 PF00111 2Fe-2S iron-sulfur cluster binding domain GCD22_02148 PF00012 Hsp70 protein GCD22_02149 PF07743 HSCB C-terminal oligomerisation domain GCD22_02150 PF01521 Iron-sulphur cluster biosynthesis GCD22_02151 PF01592 NifU-like N terminal domain GCD22_02152 PF00266 Aminotransferase class-V GCD22_02153 PF02082 Transcriptional regulator GCD22_02154 PF00132 Bacterial transferase hexapeptide (six repeats) GCD22_02155 PF00588 SpoU rRNA Methylase family GCD22_02156 PF00459 Inositol monophosphatase family GCD22_02159 PF03795 YCII-related domain GCD22_02161 PF00696 Amino acid kinase family GCD22_02161 PF00583 Acetyltransferase (GNAT) family GCD22_02163 PF00920 Dehydratase family GCD22_02164 PF01594 AI-2E family transporter GCD22_02165 PF03949 Malic enzyme, NAD binding domain GCD22_02165 PF00390 Malic enzyme, N-terminal domain GCD22_02166 PF01197 Ribosomal protein L31 GCD22_02167 PF07498 Rho termination factor, N-terminal domain GCD22_02167 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GCD22_02167 PF07497 Rho termination factor, RNA-binding domain GCD22_02168 PF00085 Thioredoxin GCD22_02171 PF12704 MacB-like periplasmic core domain GCD22_02171 PF02687 FtsX-like permease family GCD22_02171 PF00005 ABC transporter GCD22_02172 PF12704 MacB-like periplasmic core domain GCD22_02172 PF02687 FtsX-like permease family GCD22_02172 PF00005 ABC transporter GCD22_02177 PF00899 ThiF family GCD22_02181 PF02405 Permease MlaE GCD22_02182 PF00005 ABC transporter GCD22_02183 PF02875 Mur ligase family, glutamate ligase domain GCD22_02183 PF01225 Mur ligase family, catalytic domain GCD22_02183 PF08245 Mur ligase middle domain GCD22_02185 PF05690 Thiazole biosynthesis protein ThiG GCD22_02186 PF05690 Thiazole biosynthesis protein ThiG GCD22_02186 PF02597 ThiS family GCD22_02189 PF05685 Putative restriction endonuclease GCD22_02194 PF01943 Polysaccharide biosynthesis protein GCD22_02194 PF14667 Polysaccharide biosynthesis C-terminal domain GCD22_02195 PF08241 Methyltransferase domain GCD22_02200 PF01266 FAD dependent oxidoreductase GCD22_02201 PF01022 Bacterial regulatory protein, arsR family GCD22_02204 PF01790 Prolipoprotein diacylglyceryl transferase GCD22_02205 PF13361 UvrD-like helicase C-terminal domain GCD22_02205 PF00580 UvrD/REP helicase N-terminal domain GCD22_02207 PF01649 Ribosomal protein S20 GCD22_02208 PF00171 Aldehyde dehydrogenase family GCD22_02208 PF14850 DNA-binding domain of Proline dehydrogenase GCD22_02208 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GCD22_02208 PF01619 Proline dehydrogenase GCD22_02211 PF08402 TOBE domain GCD22_02211 PF00005 ABC transporter GCD22_02214 PF00149 Calcineurin-like phosphoesterase GCD22_02215 PF16124 RecQ zinc-binding GCD22_02215 PF09382 RQC domain GCD22_02215 PF00570 HRDC domain GCD22_02215 PF00271 Helicase conserved C-terminal domain GCD22_02215 PF00270 DEAD/DEAH box helicase GCD22_02216 PF01491 Frataxin-like domain GCD22_02221 PF00350 Dynamin family GCD22_02223 PF03739 Lipopolysaccharide export system permease LptF/LptG GCD22_02224 PF00883 Cytosol aminopeptidase family, catalytic domain GCD22_02224 PF02789 Cytosol aminopeptidase family, N-terminal domain GCD22_02227 PF08264 Anticodon-binding domain of tRNA GCD22_02227 PF10458 Valyl tRNA synthetase tRNA binding arm GCD22_02227 PF00133 tRNA synthetases class I (I, L, M and V) GCD22_02228 PF10458 Valyl tRNA synthetase tRNA binding arm GCD22_02228 PF08264 Anticodon-binding domain of tRNA GCD22_02228 PF00133 tRNA synthetases class I (I, L, M and V) GCD22_02229 PF06965 Na+/H+ antiporter 1 GCD22_02230 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GCD22_02230 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GCD22_02232 PF00440 Bacterial regulatory proteins, tetR family GCD22_02232 PF16925 Tetracyclin repressor-like, C-terminal domain GCD22_02234 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GCD22_02235 PF00892 EamA-like transporter family GCD22_02238 PF00589 Phage integrase family GCD22_02246 PF00795 Carbon-nitrogen hydrolase GCD22_02255 PF05114 Protein of unknown function (DUF692) GCD22_02257 PF11412 Disulphide bond corrector protein DsbC GCD22_02257 PF02683 Cytochrome C biogenesis protein transmembrane region GCD22_02260 PF13098 Thioredoxin-like domain GCD22_02266 PF13686 DsrE/DsrF/DrsH-like family GCD22_02267 PF01206 Sulfurtransferase TusA GCD22_02272 PF13570 PQQ-like domain GCD22_02272 PF13360 PQQ-like domain GCD22_02272 PF01011 PQQ enzyme repeat GCD22_02275 PF00216 Bacterial DNA-binding protein GCD22_02276 PF00216 Bacterial DNA-binding protein GCD22_02280 PF00563 EAL domain GCD22_02280 PF13426 PAS domain GCD22_02280 PF08448 PAS fold GCD22_02280 PF08447 PAS fold GCD22_02280 PF05231 MASE1 GCD22_02280 PF00990 Diguanylate cyclase, GGDEF domain GCD22_02281 PF00872 Transposase, Mutator family GCD22_02282 PF00563 EAL domain GCD22_02282 PF00990 Diguanylate cyclase, GGDEF domain GCD22_02282 PF13188 PAS domain GCD22_02282 PF03707 Bacterial signalling protein N terminal repeat GCD22_02284 PF17200 Single Cache domain 2 GCD22_02284 PF00672 HAMP domain GCD22_02284 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GCD22_02286 PF01548 Transposase GCD22_02286 PF02371 Transposase IS116/IS110/IS902 family GCD22_02291 PF13536 Putative multidrug resistance efflux transporter GCD22_02293 PF13419 Haloacid dehalogenase-like hydrolase GCD22_02294 PF01479 S4 domain GCD22_02294 PF00849 RNA pseudouridylate synthase GCD22_02296 PF10150 Ribonuclease E/G family GCD22_02296 PF12111 Polyribonucleotide phosphorylase C terminal GCD22_02296 PF00575 S1 RNA binding domain GCD22_02297 PF09190 DALR domain GCD22_02297 PF01406 tRNA synthetases class I (C) catalytic domain GCD22_02298 PF00749 tRNA synthetases class I (E and Q), catalytic domain GCD22_02299 PF17092 Penicillin-binding protein OB-like domain GCD22_02299 PF00912 Transglycosylase GCD22_02299 PF00905 Penicillin binding protein transpeptidase domain GCD22_02300 PF00875 DNA photolyase GCD22_02300 PF03441 FAD binding domain of DNA photolyase GCD22_02305 PF00732 GMC oxidoreductase GCD22_02305 PF05199 GMC oxidoreductase GCD22_02307 PF00999 Sodium/hydrogen exchanger family GCD22_02312 PF01925 Sulfite exporter TauE/SafE GCD22_02314 PF00183 Hsp90 protein GCD22_02314 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_02315 PF01011 PQQ enzyme repeat GCD22_02315 PF13570 PQQ-like domain GCD22_02315 PF13360 PQQ-like domain GCD22_02317 PF13302 Acetyltransferase (GNAT) domain GCD22_02317 PF00117 Glutamine amidotransferase class-I GCD22_02317 PF00958 GMP synthase C terminal domain GCD22_02317 PF13673 Acetyltransferase (GNAT) domain GCD22_02317 PF03352 Methyladenine glycosylase GCD22_02321 PF13525 Outer membrane lipoprotein GCD22_02324 PF01594 AI-2E family transporter GCD22_02326 PF01850 PIN domain GCD22_02334 PF00873 AcrB/AcrD/AcrF family GCD22_02343 PF00158 Sigma-54 interaction domain GCD22_02343 PF02954 Bacterial regulatory protein, Fis family GCD22_02343 PF01590 GAF domain GCD22_02349 PF01654 Cytochrome bd terminal oxidase subunit I GCD22_02350 PF02322 Cytochrome bd terminal oxidase subunit II GCD22_02353 PF06146 Phosphate-starvation-inducible E GCD22_02361 PF01850 PIN domain GCD22_02366 PF03869 Arc-like DNA binding domain GCD22_02367 PF01850 PIN domain GCD22_02370 PF05958 tRNA (Uracil-5-)-methyltransferase GCD22_02370 PF01938 TRAM domain GCD22_02371 PF00005 ABC transporter GCD22_02372 PF00005 ABC transporter GCD22_02377 PF16363 GDP-mannose 4,6 dehydratase GCD22_02378 PF16363 GDP-mannose 4,6 dehydratase GCD22_02380 PF00534 Glycosyl transferases group 1 GCD22_02380 PF13439 Glycosyltransferase Family 4 GCD22_02382 PF02563 Polysaccharide biosynthesis/export protein GCD22_02384 PF02801 Beta-ketoacyl synthase, C-terminal domain GCD22_02384 PF00698 Acyl transferase domain GCD22_02384 PF14765 Polyketide synthase dehydratase GCD22_02384 PF00109 Beta-ketoacyl synthase, N-terminal domain GCD22_02384 PF16197 Ketoacyl-synthetase C-terminal extension GCD22_02384 PF00550 Phosphopantetheine attachment site GCD22_02384 PF08659 KR domain GCD22_02384 PF08240 Alcohol dehydrogenase GroES-like domain GCD22_02386 PF05159 Capsule polysaccharide biosynthesis protein GCD22_02387 PF05159 Capsule polysaccharide biosynthesis protein GCD22_02396 PF00483 Nucleotidyl transferase GCD22_02396 PF01050 Mannose-6-phosphate isomerase GCD22_02399 PF01061 ABC-2 type transporter GCD22_02404 PF00877 NlpC/P60 family GCD22_02406 PF01979 Amidohydrolase family GCD22_02410 PF00155 Aminotransferase class I and II GCD22_02411 PF00132 Bacterial transferase hexapeptide (six repeats) GCD22_02411 PF14602 Hexapeptide repeat of succinyl-transferase GCD22_02411 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GCD22_02412 PF07687 Peptidase dimerisation domain GCD22_02412 PF01546 Peptidase family M20/M25/M40 GCD22_02413 PF03330 Lytic transglycolase GCD22_02413 PF05036 Sporulation related domain GCD22_02416 PF13145 PPIC-type PPIASE domain GCD22_02419 PF00216 Bacterial DNA-binding protein GCD22_02420 PF00004 ATPase family associated with various cellular activities (AAA) GCD22_02420 PF05362 Lon protease (S16) C-terminal proteolytic domain GCD22_02420 PF02190 ATP-dependent protease La (LON) substrate-binding domain GCD22_02421 PF07724 AAA domain (Cdc48 subfamily) GCD22_02421 PF10431 C-terminal, D2-small domain, of ClpB protein GCD22_02421 PF06689 ClpX C4-type zinc finger GCD22_02422 PF00574 Clp protease GCD22_02423 PF05698 Bacterial trigger factor protein (TF) C-terminus GCD22_02423 PF05697 Bacterial trigger factor protein (TF) GCD22_02423 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GCD22_02424 PF00156 Phosphoribosyl transferase domain GCD22_02425 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GCD22_02426 PF18073 Rubredoxin metal binding domain GCD22_02427 PF00216 Bacterial DNA-binding protein GCD22_02428 PF00575 S1 RNA binding domain GCD22_02429 PF02224 Cytidylate kinase GCD22_02430 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GCD22_02431 PF02153 Prephenate dehydrogenase GCD22_02432 PF00793 DAHP synthetase I family GCD22_02432 PF18152 DAHP synthase ferredoxin-like domain GCD22_02433 PF00155 Aminotransferase class I and II GCD22_02434 PF00800 Prephenate dehydratase GCD22_02434 PF01842 ACT domain GCD22_02434 PF01817 Chorismate mutase type II GCD22_02435 PF00266 Aminotransferase class-V GCD22_02436 PF00521 DNA gyrase/topoisomerase IV, subunit A GCD22_02436 PF03989 DNA gyrase C-terminal domain, beta-propeller GCD22_02437 PF01008 Initiation factor 2 subunit family GCD22_02438 PF10672 S-adenosylmethionine-dependent methyltransferase GCD22_02438 PF17785 PUA-like domain GCD22_02442 PF02195 ParB-like nuclease domain GCD22_02442 PF17762 HTH domain found in ParB protein GCD22_02443 PF13614 AAA domain GCD22_02444 PF03743 Bacterial conjugation TrbI-like protein GCD22_02447 PF02384 N-6 DNA Methylase GCD22_02457 PF03135 CagE, TrbE, VirB family, component of type IV transporter system GCD22_02462 PF00437 Type II/IV secretion system protein GCD22_02474 PF00437 Type II/IV secretion system protein GCD22_02477 PF00263 Bacterial type II and III secretion system protein GCD22_02477 PF07655 Secretin N-terminal domain GCD22_02480 PF14718 Soluble lytic murein transglycosylase L domain GCD22_02480 PF01464 Transglycosylase SLT domain GCD22_02516 PF01906 Putative heavy-metal-binding GCD22_02528 PF01757 Acyltransferase family GCD22_02529 PF00436 Single-strand binding protein family GCD22_02534 PF01555 DNA methylase GCD22_02534 PF01555 DNA methylase GCD22_02535 PF01555 DNA methylase GCD22_02545 PF01751 Toprim domain GCD22_02545 PF01131 DNA topoisomerase GCD22_02548 PF01464 Transglycosylase SLT domain GCD22_02550 PF02899 Phage integrase, N-terminal SAM-like domain GCD22_02550 PF00589 Phage integrase family GCD22_02555 PF02534 Type IV secretory system Conjugative DNA transfer GCD22_02557 PF00589 Phage integrase family GCD22_02565 PF09588 YqaJ-like viral recombinase domain GCD22_02571 PF13438 Domain of unknown function (DUF4113) GCD22_02571 PF00817 impB/mucB/samB family GCD22_02571 PF11798 IMS family HHH motif GCD22_02571 PF11799 impB/mucB/samB family C-terminal domain GCD22_02572 PF00717 Peptidase S24-like GCD22_02577 PF01850 PIN domain GCD22_02580 PF00872 Transposase, Mutator family GCD22_02585 PF12161 HsdM N-terminal domain GCD22_02585 PF02384 N-6 DNA Methylase GCD22_02590 PF18766 SWI2/SNF2 ATPase GCD22_02590 PF12008 Type I restriction and modification enzyme - subunit R C terminal GCD22_02590 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GCD22_02593 PF03475 3-alpha domain GCD22_02593 PF03473 MOSC domain GCD22_02597 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GCD22_02597 PF13538 UvrD-like helicase C-terminal domain GCD22_02597 PF14490 Helix-hairpin-helix containing domain GCD22_02600 PF00990 Diguanylate cyclase, GGDEF domain GCD22_02603 PF00872 Transposase, Mutator family GCD22_02607 PF09588 YqaJ-like viral recombinase domain GCD22_02619 PF00376 MerR family regulatory protein GCD22_02619 PF09278 MerR, DNA binding GCD22_02628 PF00005 ABC transporter GCD22_02628 PF00664 ABC transporter transmembrane region GCD22_02629 PF01263 Aldose 1-epimerase GCD22_02631 PF00403 Heavy-metal-associated domain GCD22_02632 PF00155 Aminotransferase class I and II GCD22_02633 PF02222 ATP-grasp domain GCD22_02635 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GCD22_02635 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GCD22_02636 PF01022 Bacterial regulatory protein, arsR family GCD22_02637 PF01207 Dihydrouridine synthase (Dus) GCD22_02638 PF00589 Phage integrase family GCD22_02642 PF09278 MerR, DNA binding GCD22_02642 PF00376 MerR family regulatory protein GCD22_02644 PF00403 Heavy-metal-associated domain GCD22_02644 PF07992 Pyridine nucleotide-disulphide oxidoreductase GCD22_02644 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GCD22_02658 PF01654 Cytochrome bd terminal oxidase subunit I GCD22_02663 PF02627 Carboxymuconolactone decarboxylase family GCD22_02664 PF00730 HhH-GPD superfamily base excision DNA repair protein GCD22_02664 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain GCD22_02669 PF11953 Domain of unknown function (DUF3470) GCD22_02669 PF00037 4Fe-4S binding domain GCD22_02670 PF00175 Oxidoreductase NAD-binding domain GCD22_02670 PF00970 Oxidoreductase FAD-binding domain GCD22_02670 PF00111 2Fe-2S iron-sulfur cluster binding domain GCD22_02671 PF02798 Glutathione S-transferase, N-terminal domain GCD22_02671 PF00043 Glutathione S-transferase, C-terminal domain GCD22_02674 PF14710 Respiratory nitrate reductase alpha N-terminal GCD22_02674 PF01568 Molydopterin dinucleotide binding domain GCD22_02674 PF00384 Molybdopterin oxidoreductase GCD22_02675 PF13247 4Fe-4S dicluster domain GCD22_02675 PF14711 Respiratory nitrate reductase beta C-terminal GCD22_02676 PF02665 Nitrate reductase gamma subunit GCD22_02677 PF07690 Major Facilitator Superfamily GCD22_02681 PF00970 Oxidoreductase FAD-binding domain GCD22_02681 PF00042 Globin GCD22_02681 PF00175 Oxidoreductase NAD-binding domain GCD22_02682 PF00970 Oxidoreductase FAD-binding domain GCD22_02682 PF00175 Oxidoreductase NAD-binding domain GCD22_02682 PF00111 2Fe-2S iron-sulfur cluster binding domain GCD22_02685 PF01597 Glycine cleavage H-protein GCD22_02686 PF00654 Voltage gated chloride channel GCD22_02687 PF02195 ParB-like nuclease domain GCD22_02687 PF17762 HTH domain found in ParB protein GCD22_02688 PF13614 AAA domain GCD22_02701 PF01209 ubiE/COQ5 methyltransferase family GCD22_02706 PF05114 Protein of unknown function (DUF692) GCD22_02708 PF02683 Cytochrome C biogenesis protein transmembrane region GCD22_02708 PF11412 Disulphide bond corrector protein DsbC GCD22_02711 PF13098 Thioredoxin-like domain GCD22_02715 PF00589 Phage integrase family GCD22_02715 PF02899 Phage integrase, N-terminal SAM-like domain GCD22_02727 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GCD22_02727 PF17200 Single Cache domain 2 GCD22_02727 PF00672 HAMP domain GCD22_02729 PF00990 Diguanylate cyclase, GGDEF domain GCD22_02729 PF00563 EAL domain GCD22_02729 PF13188 PAS domain GCD22_02729 PF03707 Bacterial signalling protein N terminal repeat GCD22_02735 PF07690 Major Facilitator Superfamily GCD22_02736 PF00561 alpha/beta hydrolase fold GCD22_02739 PF00872 Transposase, Mutator family GCD22_02757 PF00589 Phage integrase family GCD22_02761 PF04715 Anthranilate synthase component I, N terminal region GCD22_02761 PF00425 chorismate binding enzyme GCD22_02763 PF02321 Outer membrane efflux protein GCD22_02764 PF07690 Major Facilitator Superfamily GCD22_02765 PF00654 Voltage gated chloride channel GCD22_02766 PF00654 Voltage gated chloride channel GCD22_02767 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_02767 PF03466 LysR substrate binding domain GCD22_02768 PF01594 AI-2E family transporter GCD22_02771 PF00271 Helicase conserved C-terminal domain GCD22_02771 PF17191 RecG wedge domain GCD22_02771 PF00270 DEAD/DEAH box helicase GCD22_02773 PF01042 Endoribonuclease L-PSP GCD22_02774 PF13291 ACT domain GCD22_02774 PF02824 TGS domain GCD22_02774 PF04607 Region found in RelA / SpoT proteins GCD22_02775 PF01192 RNA polymerase Rpb6 GCD22_02776 PF00625 Guanylate kinase GCD22_02777 PF03755 YicC-like family, N-terminal region GCD22_02777 PF08340 Domain of unknown function (DUF1732) GCD22_02783 PF08406 CbbQ/NirQ/NorQ C-terminal GCD22_02783 PF07728 AAA domain (dynein-related subfamily) GCD22_02787 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GCD22_02787 PF00361 Proton-conducting membrane transporter GCD22_02792 PF00210 Ferritin-like domain GCD22_02801 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GCD22_02801 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GCD22_02802 PF03466 LysR substrate binding domain GCD22_02802 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_02803 PF03023 Lipid II flippase MurJ GCD22_02805 PF01687 Riboflavin kinase GCD22_02805 PF06574 FAD synthetase GCD22_02806 PF06827 Zinc finger found in FPG and IleRS GCD22_02806 PF00133 tRNA synthetases class I (I, L, M and V) GCD22_02806 PF08264 Anticodon-binding domain of tRNA GCD22_02807 PF01252 Signal peptidase (SPase) II GCD22_02813 PF06472 ABC transporter transmembrane region 2 GCD22_02813 PF00005 ABC transporter GCD22_02817 PF03710 Glutamate-ammonia ligase adenylyltransferase GCD22_02817 PF08335 GlnD PII-uridylyltransferase GCD22_02818 PF01063 Amino-transferase class IV GCD22_02821 PF02683 Cytochrome C biogenesis protein transmembrane region GCD22_02821 PF11412 Disulphide bond corrector protein DsbC GCD22_02823 PF00166 Chaperonin 10 Kd subunit GCD22_02824 PF00118 TCP-1/cpn60 chaperonin family GCD22_02834 PF00990 Diguanylate cyclase, GGDEF domain GCD22_02834 PF05231 MASE1 GCD22_02834 PF08447 PAS fold GCD22_02834 PF08448 PAS fold GCD22_02834 PF13426 PAS domain GCD22_02834 PF00563 EAL domain GCD22_02836 PF07963 Prokaryotic N-terminal methylation motif GCD22_02836 PF00114 Pilin (bacterial filament) GCD22_02837 PF00114 Pilin (bacterial filament) GCD22_02837 PF07963 Prokaryotic N-terminal methylation motif GCD22_02846 PF00589 Phage integrase family GCD22_02846 PF14659 Phage integrase, N-terminal SAM-like domain GCD22_02846 PF13356 Arm DNA-binding domain GCD22_02864 PF02355 Protein export membrane protein GCD22_02864 PF07549 SecD/SecF GG Motif GCD22_02865 PF02355 Protein export membrane protein GCD22_02865 PF13721 SecD export protein N-terminal TM region GCD22_02865 PF07549 SecD/SecF GG Motif GCD22_02866 PF02699 Preprotein translocase subunit GCD22_02867 PF01702 Queuine tRNA-ribosyltransferase GCD22_02868 PF02547 Queuosine biosynthesis protein GCD22_02869 PF01595 Cyclin M transmembrane N-terminal domain GCD22_02869 PF00571 CBS domain GCD22_02869 PF03471 Transporter associated domain GCD22_02871 PF01053 Cys/Met metabolism PLP-dependent enzyme GCD22_02872 PF00156 Phosphoribosyl transferase domain GCD22_02874 PF08245 Mur ligase middle domain GCD22_02874 PF02875 Mur ligase family, glutamate ligase domain GCD22_02875 PF17848 Acetyl-coA carboxylase zinc finger domain GCD22_02875 PF01039 Carboxyl transferase domain GCD22_02876 PF00290 Tryptophan synthase alpha chain GCD22_02877 PF00291 Pyridoxal-phosphate dependent enzyme GCD22_02878 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GCD22_02879 PF01416 tRNA pseudouridine synthase GCD22_02881 PF01118 Semialdehyde dehydrogenase, NAD binding domain GCD22_02881 PF02774 Semialdehyde dehydrogenase, dimerisation domain GCD22_02882 PF00180 Isocitrate/isopropylmalate dehydrogenase GCD22_02884 PF12804 MobA-like NTP transferase domain GCD22_02885 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GCD22_02886 PF00994 Probable molybdopterin binding domain GCD22_02886 PF03454 MoeA C-terminal region (domain IV) GCD22_02886 PF03453 MoeA N-terminal region (domain I and II) GCD22_02887 PF13091 PLD-like domain GCD22_02889 PF05724 Thiopurine S-methyltransferase (TPMT) GCD22_02890 PF03466 LysR substrate binding domain GCD22_02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_02891 PF07690 Major Facilitator Superfamily GCD22_02892 PF02321 Outer membrane efflux protein GCD22_02893 PF00529 HlyD membrane-fusion protein of T1SS GCD22_02893 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCD22_02894 PF00970 Oxidoreductase FAD-binding domain GCD22_02894 PF00175 Oxidoreductase NAD-binding domain GCD22_02894 PF00042 Globin GCD22_02895 PF00970 Oxidoreductase FAD-binding domain GCD22_02895 PF00111 2Fe-2S iron-sulfur cluster binding domain GCD22_02895 PF00175 Oxidoreductase NAD-binding domain GCD22_02898 PF01597 Glycine cleavage H-protein GCD22_02900 PF04343 Protein of unknown function, DUF488 GCD22_02901 PF13545 Crp-like helix-turn-helix domain GCD22_02901 PF00027 Cyclic nucleotide-binding domain GCD22_02904 PF00873 AcrB/AcrD/AcrF family GCD22_02909 PF00872 Transposase, Mutator family GCD22_02913 PF00589 Phage integrase family GCD22_02913 PF13495 Phage integrase, N-terminal SAM-like domain GCD22_02914 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH GCD22_02916 PF08521 Two-component sensor kinase N-terminal GCD22_02916 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_02916 PF00512 His Kinase A (phospho-acceptor) domain GCD22_02917 PF00486 Transcriptional regulatory protein, C terminal GCD22_02917 PF00072 Response regulator receiver domain GCD22_02924 PF10518 TAT (twin-arginine translocation) pathway signal sequence GCD22_02924 PF00394 Multicopper oxidase GCD22_02924 PF07731 Multicopper oxidase GCD22_02924 PF07732 Multicopper oxidase GCD22_02927 PF00486 Transcriptional regulatory protein, C terminal GCD22_02927 PF00072 Response regulator receiver domain GCD22_02928 PF00512 His Kinase A (phospho-acceptor) domain GCD22_02928 PF00672 HAMP domain GCD22_02928 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_02931 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCD22_02932 PF00873 AcrB/AcrD/AcrF family GCD22_02934 PF13520 Amino acid permease GCD22_02938 PF01066 CDP-alcohol phosphatidyltransferase GCD22_02939 PF01541 GIY-YIG catalytic domain GCD22_02939 PF08459 UvrC Helix-hairpin-helix N-terminal GCD22_02939 PF02151 UvrB/uvrC motif GCD22_02941 PF08207 Elongation factor P (EF-P) KOW-like domain GCD22_02941 PF01132 Elongation factor P (EF-P) OB domain GCD22_02941 PF09285 Elongation factor P, C-terminal GCD22_02942 PF04977 Septum formation initiator GCD22_02943 PF03952 Enolase, N-terminal domain GCD22_02943 PF00113 Enolase, C-terminal TIM barrel domain GCD22_02944 PF00793 DAHP synthetase I family GCD22_02945 PF00117 Glutamine amidotransferase class-I GCD22_02945 PF06418 CTP synthase N-terminus GCD22_02946 PF08240 Alcohol dehydrogenase GroES-like domain GCD22_02946 PF00107 Zinc-binding dehydrogenase GCD22_02948 PF02040 Arsenical pump membrane protein GCD22_02949 PF01022 Bacterial regulatory protein, arsR family GCD22_02950 PF01451 Low molecular weight phosphotyrosine protein phosphatase GCD22_02952 PF17757 UvrB interaction domain GCD22_02952 PF12344 Ultra-violet resistance protein B GCD22_02952 PF02151 UvrB/uvrC motif GCD22_02952 PF04851 Type III restriction enzyme, res subunit GCD22_02952 PF00271 Helicase conserved C-terminal domain GCD22_02955 PF01066 CDP-alcohol phosphatidyltransferase GCD22_02956 PF02666 Phosphatidylserine decarboxylase GCD22_02958 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GCD22_02958 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GCD22_02959 PF10369 Small subunit of acetolactate synthase GCD22_02960 PF00205 Thiamine pyrophosphate enzyme, central domain GCD22_02960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GCD22_02960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GCD22_02961 PF01713 Smr domain GCD22_02961 PF00488 MutS domain V GCD22_02963 PF01894 Uncharacterised protein family UPF0047 GCD22_02964 PF14437 MafB19-like deaminase GCD22_02969 PF03958 Bacterial type II/III secretion system short domain GCD22_02969 PF11741 AMIN domain GCD22_02969 PF07660 Secretin and TonB N terminus short domain GCD22_02969 PF00263 Bacterial type II and III secretion system protein GCD22_02970 PF01202 Shikimate kinase GCD22_02971 PF01761 3-dehydroquinate synthase GCD22_02972 PF02511 Thymidylate synthase complementing protein GCD22_02974 PF01493 GXGXG motif GCD22_02974 PF01645 Conserved region in glutamate synthase GCD22_02974 PF04898 Glutamate synthase central domain GCD22_02974 PF00310 Glutamine amidotransferases class-II GCD22_02975 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GCD22_02975 PF07992 Pyridine nucleotide-disulphide oxidoreductase GCD22_02976 PF01208 Uroporphyrinogen decarboxylase (URO-D) GCD22_02977 PF01553 Acyltransferase GCD22_02981 PF03459 TOBE domain GCD22_02981 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_02982 PF00291 Pyridoxal-phosphate dependent enzyme GCD22_02982 PF00585 C-terminal regulatory domain of Threonine dehydratase GCD22_02984 PF13439 Glycosyltransferase Family 4 GCD22_02984 PF00534 Glycosyl transferases group 1 GCD22_02985 PF00535 Glycosyl transferase family 2 GCD22_02987 PF00534 Glycosyl transferases group 1 GCD22_02987 PF13439 Glycosyltransferase Family 4 GCD22_02992 PF14667 Polysaccharide biosynthesis C-terminal domain GCD22_02992 PF01943 Polysaccharide biosynthesis protein GCD22_02993 PF13614 AAA domain GCD22_02993 PF13807 G-rich domain on putative tyrosine kinase GCD22_02993 PF02706 Chain length determinant protein GCD22_02995 PF01370 NAD dependent epimerase/dehydratase family GCD22_02996 PF16363 GDP-mannose 4,6 dehydratase GCD22_02997 PF13439 Glycosyltransferase Family 4 GCD22_02999 PF02397 Bacterial sugar transferase GCD22_03000 PF01808 AICARFT/IMPCHase bienzyme GCD22_03000 PF02142 MGS-like domain GCD22_03001 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GCD22_03001 PF02843 Phosphoribosylglycinamide synthetase, C domain GCD22_03001 PF02844 Phosphoribosylglycinamide synthetase, N domain GCD22_03002 PF01300 Telomere recombination GCD22_03003 PF01218 Coproporphyrinogen III oxidase GCD22_03004 PF01180 Dihydroorotate dehydrogenase GCD22_03006 PF00083 Sugar (and other) transporter GCD22_03008 PF05506 Domain of unknown function (DUF756) GCD22_03008 PF04185 Phosphoesterase family GCD22_03010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCD22_03011 PF00873 AcrB/AcrD/AcrF family GCD22_03014 PF04185 Phosphoesterase family GCD22_03018 PF02472 Biopolymer transport protein ExbD/TolR GCD22_03021 PF07690 Major Facilitator Superfamily GCD22_03026 PF02472 Biopolymer transport protein ExbD/TolR GCD22_03030 PF00512 His Kinase A (phospho-acceptor) domain GCD22_03030 PF00672 HAMP domain GCD22_03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_03031 PF00486 Transcriptional regulatory protein, C terminal GCD22_03031 PF00072 Response regulator receiver domain GCD22_03033 PF00929 Exonuclease GCD22_03039 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GCD22_03039 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GCD22_03039 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GCD22_03039 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GCD22_03067 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB GCD22_03068 PF00589 Phage integrase family GCD22_03068 PF02899 Phage integrase, N-terminal SAM-like domain GCD22_03070 PF02769 AIR synthase related protein, C-terminal domain GCD22_03070 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GCD22_03070 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GCD22_03071 PF01259 SAICAR synthetase GCD22_03072 PF10397 Adenylosuccinate lyase C-terminus GCD22_03072 PF00206 Lyase GCD22_03074 PF00701 Dihydrodipicolinate synthetase family GCD22_03078 PF03006 Haemolysin-III related GCD22_03079 PF11741 AMIN domain GCD22_03079 PF01520 N-acetylmuramoyl-L-alanine amidase GCD22_03080 PF00085 Thioredoxin GCD22_03081 PF00462 Glutaredoxin GCD22_03082 PF00581 Rhodanese-like domain GCD22_03084 PF00873 AcrB/AcrD/AcrF family GCD22_03085 PF13533 Biotin-lipoyl like GCD22_03088 PF01022 Bacterial regulatory protein, arsR family GCD22_03091 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GCD22_03094 PF00899 ThiF family GCD22_03095 PF01026 TatD related DNase GCD22_03096 PF01494 FAD binding domain GCD22_03097 PF01494 FAD binding domain GCD22_03098 PF04380 Membrane fusogenic activity GCD22_03099 PF13335 Magnesium chelatase, subunit ChlI C-terminal GCD22_03099 PF01078 Magnesium chelatase, subunit ChlI GCD22_03102 PF16658 Class II release factor RF3, C-terminal domain GCD22_03102 PF03144 Elongation factor Tu domain 2 GCD22_03102 PF00009 Elongation factor Tu GTP binding domain GCD22_03104 PF00814 Glycoprotease family GCD22_03105 PF13307 Helicase C-terminal domain GCD22_03105 PF04851 Type III restriction enzyme, res subunit GCD22_03107 PF01578 Cytochrome C assembly protein GCD22_03108 PF00877 NlpC/P60 family GCD22_03113 PF07664 Ferrous iron transport protein B C terminus GCD22_03113 PF07670 Nucleoside recognition GCD22_03113 PF02421 Ferrous iron transport protein B GCD22_03113 PF17910 FeoB cytosolic helical domain GCD22_03115 PF00795 Carbon-nitrogen hydrolase GCD22_03116 PF07722 Peptidase C26 GCD22_03117 PF09335 SNARE associated Golgi protein GCD22_03124 PF00133 tRNA synthetases class I (I, L, M and V) GCD22_03124 PF09334 tRNA synthetases class I (M) GCD22_03124 PF01588 Putative tRNA binding domain GCD22_03126 PF00850 Histone deacetylase domain GCD22_03128 PF08406 CbbQ/NirQ/NorQ C-terminal GCD22_03128 PF07728 AAA domain (dynein-related subfamily) GCD22_03140 PF03099 Biotin/lipoate A/B protein ligase family GCD22_03142 PF01597 Glycine cleavage H-protein GCD22_03144 PF01597 Glycine cleavage H-protein GCD22_03145 PF02754 Cysteine-rich domain GCD22_03148 PF01593 Flavin containing amine oxidoreductase GCD22_03151 PF13686 DsrE/DsrF/DrsH-like family GCD22_03152 PF01206 Sulfurtransferase TusA GCD22_03154 PF06463 Molybdenum Cofactor Synthesis C GCD22_03154 PF04055 Radical SAM superfamily GCD22_03156 PF13247 4Fe-4S dicluster domain GCD22_03156 PF12800 4Fe-4S binding domain GCD22_03157 PF00384 Molybdopterin oxidoreductase GCD22_03157 PF01568 Molydopterin dinucleotide binding domain GCD22_03157 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GCD22_03159 PF01967 MoaC family GCD22_03161 PF00989 PAS fold GCD22_03161 PF00512 His Kinase A (phospho-acceptor) domain GCD22_03161 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_03162 PF02954 Bacterial regulatory protein, Fis family GCD22_03162 PF00158 Sigma-54 interaction domain GCD22_03162 PF00072 Response regulator receiver domain GCD22_03167 PF03625 Domain of unknown function DUF302 GCD22_03168 PF00149 Calcineurin-like phosphoesterase GCD22_03168 PF02872 5'-nucleotidase, C-terminal domain GCD22_03170 PF04085 rod shape-determining protein MreC GCD22_03172 PF01098 Cell cycle protein GCD22_03173 PF07943 Penicillin-binding protein 5, C-terminal domain GCD22_03173 PF00768 D-alanyl-D-alanine carboxypeptidase GCD22_03175 PF03099 Biotin/lipoate A/B protein ligase family GCD22_03176 PF04055 Radical SAM superfamily GCD22_03176 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GCD22_03185 PF02091 Glycyl-tRNA synthetase alpha subunit GCD22_03186 PF02092 Glycyl-tRNA synthetase beta subunit GCD22_03188 PF01553 Acyltransferase GCD22_03189 PF08443 RimK-like ATP-grasp domain GCD22_03189 PF18030 RimK PreATP-grasp domain GCD22_03196 PF02677 Epoxyqueuosine reductase QueH GCD22_03198 PF01510 N-acetylmuramoyl-L-alanine amidase GCD22_03201 PF00682 HMGL-like GCD22_03201 PF08502 LeuA allosteric (dimerisation) domain GCD22_03202 PF00158 Sigma-54 interaction domain GCD22_03202 PF00072 Response regulator receiver domain GCD22_03202 PF02954 Bacterial regulatory protein, Fis family GCD22_03203 PF00872 Transposase, Mutator family GCD22_03204 PF00158 Sigma-54 interaction domain GCD22_03204 PF02954 Bacterial regulatory protein, Fis family GCD22_03204 PF13185 GAF domain GCD22_03212 PF05736 OprF membrane domain GCD22_03212 PF00691 OmpA family GCD22_03215 PF00485 Phosphoribulokinase / Uridine kinase family GCD22_03216 PF02219 Methylenetetrahydrofolate reductase GCD22_03217 PF05221 S-adenosyl-L-homocysteine hydrolase GCD22_03217 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GCD22_03218 PF02772 S-adenosylmethionine synthetase, central domain GCD22_03218 PF02773 S-adenosylmethionine synthetase, C-terminal domain GCD22_03218 PF00438 S-adenosylmethionine synthetase, N-terminal domain GCD22_03221 PF00294 pfkB family carbohydrate kinase GCD22_03223 PF00343 Carbohydrate phosphorylase GCD22_03224 PF01676 Metalloenzyme superfamily GCD22_03224 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GCD22_03225 PF01551 Peptidase family M23 GCD22_03226 PF13180 PDZ domain GCD22_03226 PF03572 Peptidase family S41 GCD22_03227 PF01965 DJ-1/PfpI family GCD22_03230 PF02617 ATP-dependent Clp protease adaptor protein ClpS GCD22_03231 PF07724 AAA domain (Cdc48 subfamily) GCD22_03231 PF00004 ATPase family associated with various cellular activities (AAA) GCD22_03231 PF10431 C-terminal, D2-small domain, of ClpB protein GCD22_03231 PF17871 AAA lid domain GCD22_03231 PF02861 Clp amino terminal domain, pathogenicity island component GCD22_03232 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GCD22_03233 PF00958 GMP synthase C terminal domain GCD22_03233 PF00117 Glutamine amidotransferase class-I GCD22_03233 PF02540 NAD synthase GCD22_03234 PF10417 C-terminal domain of 1-Cys peroxiredoxin GCD22_03234 PF00578 AhpC/TSA family GCD22_03236 PF00719 Inorganic pyrophosphatase GCD22_03237 PF02348 Cytidylyltransferase GCD22_03238 PF03966 Trm112p-like protein GCD22_03239 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GCD22_03242 PF02472 Biopolymer transport protein ExbD/TolR GCD22_03244 PF00753 Metallo-beta-lactamase superfamily GCD22_03244 PF03772 Competence protein GCD22_03254 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GCD22_03256 PF04221 RelB antitoxin GCD22_03257 PF00005 ABC transporter GCD22_03258 PF02687 FtsX-like permease family GCD22_03258 PF12704 MacB-like periplasmic core domain GCD22_03259 PF00152 tRNA synthetases class II (D, K and N) GCD22_03259 PF01336 OB-fold nucleic acid binding domain GCD22_03260 PF03462 PCRF domain GCD22_03260 PF00472 RF-1 domain GCD22_03261 PF01850 PIN domain GCD22_03264 PF17768 RecJ OB domain GCD22_03264 PF02272 DHHA1 domain GCD22_03264 PF01368 DHH family GCD22_03266 PF00291 Pyridoxal-phosphate dependent enzyme GCD22_03267 PF01842 ACT domain GCD22_03267 PF00742 Homoserine dehydrogenase GCD22_03267 PF03447 Homoserine dehydrogenase, NAD binding domain GCD22_03268 PF00155 Aminotransferase class I and II GCD22_03269 PF04430 Protein of unknown function (DUF498/DUF598) GCD22_03270 PF00140 Sigma-70 factor, region 1.2 GCD22_03270 PF04542 Sigma-70 region 2 GCD22_03270 PF04545 Sigma-70, region 4 GCD22_03270 PF04539 Sigma-70 region 3 GCD22_03272 PF01975 Survival protein SurE GCD22_03274 PF00120 Glutamine synthetase, catalytic domain GCD22_03274 PF03951 Glutamine synthetase, beta-Grasp domain GCD22_03275 PF16916 Dimerisation domain of Zinc Transporter GCD22_03275 PF01545 Cation efflux family GCD22_03279 PF01593 Flavin containing amine oxidoreductase GCD22_03281 PF00989 PAS fold GCD22_03291 PF04244 Deoxyribodipyrimidine photo-lyase-related protein GCD22_03295 PF00692 dUTPase GCD22_03296 PF10609 NUBPL iron-transfer P-loop NTPase GCD22_03298 PF01113 Dihydrodipicolinate reductase, N-terminus GCD22_03298 PF05173 Dihydrodipicolinate reductase, C-terminus GCD22_03299 PF01556 DnaJ C terminal domain GCD22_03299 PF00684 DnaJ central domain GCD22_03299 PF00226 DnaJ domain GCD22_03300 PF00012 Hsp70 protein GCD22_03301 PF01025 GrpE GCD22_03302 PF01628 HrcA protein C terminal domain GCD22_03304 PF00471 Ribosomal protein L33 GCD22_03305 PF00830 Ribosomal L28 family GCD22_03307 PF09334 tRNA synthetases class I (M) GCD22_03307 PF01588 Putative tRNA binding domain GCD22_03308 PF18152 DAHP synthase ferredoxin-like domain GCD22_03308 PF00793 DAHP synthetase I family GCD22_03309 PF00206 Lyase GCD22_03309 PF10415 Fumarase C C-terminus GCD22_03310 PF08439 Oligopeptidase F GCD22_03310 PF01432 Peptidase family M3 GCD22_03317 PF08323 Starch synthase catalytic domain GCD22_03317 PF00534 Glycosyl transferases group 1 GCD22_03319 PF00730 HhH-GPD superfamily base excision DNA repair protein GCD22_03319 PF00633 Helix-hairpin-helix motif GCD22_03319 PF10576 Iron-sulfur binding domain of endonuclease III GCD22_03321 PF01476 LysM domain GCD22_03321 PF03734 L,D-transpeptidase catalytic domain GCD22_03321 PF17969 L,D-transpeptidase C-terminal domain GCD22_03325 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GCD22_03326 PF00361 Proton-conducting membrane transporter GCD22_03333 PF08406 CbbQ/NirQ/NorQ C-terminal GCD22_03333 PF07728 AAA domain (dynein-related subfamily) GCD22_03334 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GCD22_03334 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GCD22_03335 PF03466 LysR substrate binding domain GCD22_03335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_03338 PF02594 Uncharacterised ACR, YggU family COG1872 GCD22_03339 PF00916 Sulfate permease family GCD22_03339 PF01740 STAS domain GCD22_03345 PF01728 FtsJ-like methyltransferase GCD22_03347 PF04379 ApaG domain GCD22_03348 PF01209 ubiE/COQ5 methyltransferase family GCD22_03354 PF01678 Diaminopimelate epimerase GCD22_03357 PF02899 Phage integrase, N-terminal SAM-like domain GCD22_03357 PF00589 Phage integrase family GCD22_03358 PF00227 Proteasome subunit GCD22_03359 PF07724 AAA domain (Cdc48 subfamily) GCD22_03359 PF00004 ATPase family associated with various cellular activities (AAA) GCD22_03361 PF00140 Sigma-70 factor, region 1.2 GCD22_03361 PF04542 Sigma-70 region 2 GCD22_03361 PF04545 Sigma-70, region 4 GCD22_03362 PF18075 FtsX extracellular domain GCD22_03363 PF00005 ABC transporter GCD22_03364 PF02881 SRP54-type protein, helical bundle domain GCD22_03364 PF00448 SRP54-type protein, GTPase domain GCD22_03366 PF01467 Cytidylyltransferase-like GCD22_03367 PF00037 4Fe-4S binding domain GCD22_03368 PF01926 50S ribosome-binding GTPase GCD22_03368 PF07650 KH domain GCD22_03369 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GCD22_03369 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GCD22_03369 PF06827 Zinc finger found in FPG and IleRS GCD22_03370 PF17827 PrmC N-terminal domain GCD22_03370 PF13847 Methyltransferase domain GCD22_03371 PF03462 PCRF domain GCD22_03371 PF00472 RF-1 domain GCD22_03372 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GCD22_03372 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GCD22_03372 PF01488 Shikimate / quinate 5-dehydrogenase GCD22_03375 PF00288 GHMP kinases N terminal domain GCD22_03375 PF08544 GHMP kinases C terminal GCD22_03377 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GCD22_03377 PF14572 Phosphoribosyl synthetase-associated domain GCD22_03382 PF01906 Putative heavy-metal-binding GCD22_03396 PF00557 Metallopeptidase family M24 GCD22_03396 PF05195 Aminopeptidase P, N-terminal domain GCD22_03398 PF18073 Rubredoxin metal binding domain GCD22_03399 PF01168 Alanine racemase, N-terminal domain GCD22_03399 PF00842 Alanine racemase, C-terminal domain GCD22_03400 PF00772 DnaB-like helicase N terminal domain GCD22_03400 PF03796 DnaB-like helicase C terminal domain GCD22_03401 PF01281 Ribosomal protein L9, N-terminal domain GCD22_03401 PF03948 Ribosomal protein L9, C-terminal domain GCD22_03403 PF01084 Ribosomal protein S18 GCD22_03404 PF01250 Ribosomal protein S6 GCD22_03405 PF00933 Glycosyl hydrolase family 3 N terminal domain GCD22_03406 PF13520 Amino acid permease GCD22_03408 PF01938 TRAM domain GCD22_03408 PF05958 tRNA (Uracil-5-)-methyltransferase GCD22_03412 PF00291 Pyridoxal-phosphate dependent enzyme GCD22_03414 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GCD22_03417 PF00128 Alpha amylase, catalytic domain GCD22_03417 PF02806 Alpha amylase, C-terminal all-beta domain GCD22_03417 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GCD22_03418 PF00483 Nucleotidyl transferase GCD22_03420 PF09095 Domain of unknown function (DUF1926) GCD22_03420 PF03065 Glycosyl hydrolase family 57 GCD22_03420 PF09094 Domain of unknown function (DUF1925) GCD22_03421 PF00480 ROK family GCD22_03422 PF01177 Asp/Glu/Hydantoin racemase GCD22_03425 PF04286 Protein of unknown function (DUF445) GCD22_03429 PF00436 Single-strand binding protein family GCD22_03430 PF17755 UvrA DNA-binding domain GCD22_03430 PF17760 UvrA interaction domain GCD22_03432 PF00085 Thioredoxin GCD22_03435 PF00589 Phage integrase family GCD22_03435 PF02899 Phage integrase, N-terminal SAM-like domain GCD22_03437 PF01245 Ribosomal protein L19 GCD22_03438 PF01746 tRNA (Guanine-1)-methyltransferase GCD22_03439 PF05239 PRC-barrel domain GCD22_03439 PF01782 RimM N-terminal domain GCD22_03440 PF00886 Ribosomal protein S16 GCD22_03441 PF02881 SRP54-type protein, helical bundle domain GCD22_03441 PF02978 Signal peptide binding domain GCD22_03441 PF00448 SRP54-type protein, GTPase domain GCD22_03446 PF05736 OprF membrane domain GCD22_03446 PF00691 OmpA family GCD22_03456 PF00437 Type II/IV secretion system protein GCD22_03462 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA GCD22_03463 PF15723 Motility quorum-sensing regulator, toxin of MqsA GCD22_03464 PF03167 Uracil DNA glycosylase superfamily GCD22_03470 PF00905 Penicillin binding protein transpeptidase domain GCD22_03470 PF03717 Penicillin-binding Protein dimerisation domain GCD22_03475 PF00348 Polyprenyl synthetase GCD22_03477 PF02954 Bacterial regulatory protein, Fis family GCD22_03477 PF00158 Sigma-54 interaction domain GCD22_03477 PF00072 Response regulator receiver domain GCD22_03478 PF00512 His Kinase A (phospho-acceptor) domain GCD22_03478 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_03478 PF00989 PAS fold GCD22_03482 PF14403 Circularly permuted ATP-grasp type 2 GCD22_03483 PF14403 Circularly permuted ATP-grasp type 2 GCD22_03483 PF04168 A predicted alpha-helical domain with a conserved ER motif. GCD22_03486 PF06798 PrkA serine protein kinase C-terminal domain GCD22_03486 PF08298 PrkA AAA domain GCD22_03487 PF00909 Ammonium Transporter Family GCD22_03488 PF04285 Protein of unknown function (DUF444) GCD22_03489 PF04293 SpoVR like protein GCD22_03491 PF00543 Nitrogen regulatory protein P-II GCD22_03492 PF00909 Ammonium Transporter Family GCD22_03494 PF00872 Transposase, Mutator family GCD22_03500 PF00905 Penicillin binding protein transpeptidase domain GCD22_03500 PF03717 Penicillin-binding Protein dimerisation domain GCD22_03502 PF05036 Sporulation related domain GCD22_03502 PF03330 Lytic transglycolase GCD22_03504 PF02254 TrkA-N domain GCD22_03504 PF07885 Ion channel GCD22_03506 PF00905 Penicillin binding protein transpeptidase domain GCD22_03506 PF03717 Penicillin-binding Protein dimerisation domain GCD22_03508 PF17820 PDZ domain GCD22_03508 PF13180 PDZ domain GCD22_03509 PF00768 D-alanyl-D-alanine carboxypeptidase GCD22_03509 PF07943 Penicillin-binding protein 5, C-terminal domain GCD22_03510 PF07676 WD40-like Beta Propeller Repeat GCD22_03510 PF04052 TolB amino-terminal domain GCD22_03516 PF03466 LysR substrate binding domain GCD22_03516 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_03519 PF00912 Transglycosylase GCD22_03519 PF00905 Penicillin binding protein transpeptidase domain GCD22_03519 PF17092 Penicillin-binding protein OB-like domain GCD22_03520 PF07943 Penicillin-binding protein 5, C-terminal domain GCD22_03520 PF00768 D-alanyl-D-alanine carboxypeptidase GCD22_03521 PF00342 Phosphoglucose isomerase GCD22_03522 PF01654 Cytochrome bd terminal oxidase subunit I GCD22_03523 PF02322 Cytochrome bd terminal oxidase subunit II GCD22_03529 PF00144 Beta-lactamase GCD22_03534 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GCD22_03534 PF00361 Proton-conducting membrane transporter GCD22_03535 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GCD22_03535 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GCD22_03536 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GCD22_03537 PF00361 Proton-conducting membrane transporter GCD22_03538 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GCD22_03543 PF06736 Protein of unknown function (DUF1211) GCD22_03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_03545 PF03466 LysR substrate binding domain GCD22_03550 PF05114 Protein of unknown function (DUF692) GCD22_03552 PF17946 RecC C-terminal domain GCD22_03553 PF13361 UvrD-like helicase C-terminal domain GCD22_03553 PF00580 UvrD/REP helicase N-terminal domain GCD22_03553 PF12705 PD-(D/E)XK nuclease superfamily GCD22_03554 PF13538 UvrD-like helicase C-terminal domain GCD22_03555 PF03707 Bacterial signalling protein N terminal repeat GCD22_03555 PF00990 Diguanylate cyclase, GGDEF domain GCD22_03555 PF00563 EAL domain GCD22_03556 PF01641 SelR domain GCD22_03557 PF01625 Peptide methionine sulfoxide reductase GCD22_03559 PF13098 Thioredoxin-like domain GCD22_03560 PF16363 GDP-mannose 4,6 dehydratase GCD22_03565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GCD22_03569 PF13580 SIS domain GCD22_03570 PF01565 FAD binding domain GCD22_03570 PF02913 FAD linked oxidases, C-terminal domain GCD22_03572 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GCD22_03573 PF04972 BON domain GCD22_03573 PF00691 OmpA family GCD22_03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_03575 PF03466 LysR substrate binding domain GCD22_03576 PF06969 HemN C-terminal domain GCD22_03576 PF04055 Radical SAM superfamily GCD22_03577 PF03960 ArsC family GCD22_03581 PF18693 TRAM domain GCD22_03581 PF00919 Uncharacterized protein family UPF0004 GCD22_03581 PF04055 Radical SAM superfamily GCD22_03582 PF02152 Dihydroneopterin aldolase GCD22_03583 PF02660 Glycerol-3-phosphate acyltransferase GCD22_03585 PF00814 Glycoprotease family GCD22_03586 PF04305 Protein of unknown function (DUF455) GCD22_03587 PF01654 Cytochrome bd terminal oxidase subunit I GCD22_03588 PF02322 Cytochrome bd terminal oxidase subunit II GCD22_03595 PF00486 Transcriptional regulatory protein, C terminal GCD22_03595 PF00072 Response regulator receiver domain GCD22_03596 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_03596 PF00672 HAMP domain GCD22_03596 PF00512 His Kinase A (phospho-acceptor) domain GCD22_03597 PF01566 Natural resistance-associated macrophage protein GCD22_03598 PF08402 TOBE domain GCD22_03598 PF00005 ABC transporter GCD22_03600 PF00528 Binding-protein-dependent transport system inner membrane component GCD22_03604 PF13532 2OG-Fe(II) oxygenase superfamily GCD22_03606 PF03466 LysR substrate binding domain GCD22_03606 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GCD22_03610 PF07681 DoxX GCD22_03612 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GCD22_03621 PF04542 Sigma-70 region 2 GCD22_03621 PF08281 Sigma-70, region 4 GCD22_03624 PF05973 Phage derived protein Gp49-like (DUF891) GCD22_03644 PF03389 MobA/MobL family GCD22_03644 PF16793 RepB DNA-primase from phage plasmid GCD22_03647 PF00589 Phage integrase family GCD22_03650 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GCD22_03650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GCD22_03652 PF14698 Argininosuccinate lyase C-terminal GCD22_03652 PF00206 Lyase GCD22_03654 PF00512 His Kinase A (phospho-acceptor) domain GCD22_03654 PF00672 HAMP domain GCD22_03654 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GCD22_03655 PF00072 Response regulator receiver domain GCD22_03655 PF00486 Transcriptional regulatory protein, C terminal GCD22_03658 PF13533 Biotin-lipoyl like GCD22_03659 PF00873 AcrB/AcrD/AcrF family GCD22_03661 PF01741 Large-conductance mechanosensitive channel, MscL GCD22_03662 PF02646 RmuC family GCD22_03663 PF02401 LytB protein GCD22_03664 PF03976 Polyphosphate kinase 2 (PPK2) GCD22_03665 PF00083 Sugar (and other) transporter GCD22_03666 PF01544 CorA-like Mg2+ transporter protein GCD22_03667 PF04452 RNA methyltransferase GCD22_03668 PF00459 Inositol monophosphatase family GCD22_03669 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GCD22_03670 PF00456 Transketolase, thiamine diphosphate binding domain GCD22_03670 PF02779 Transketolase, pyrimidine binding domain GCD22_03670 PF02780 Transketolase, C-terminal domain GCD22_03671 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GCD22_03671 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GCD22_03672 PF00162 Phosphoglycerate kinase GCD22_03673 PF00224 Pyruvate kinase, barrel domain GCD22_03673 PF02887 Pyruvate kinase, alpha/beta domain GCD22_03674 PF01116 Fructose-bisphosphate aldolase class-II GCD22_03675 PF00834 Ribulose-phosphate 3 epimerase family GCD22_03677 PF00425 chorismate binding enzyme GCD22_03677 PF04715 Anthranilate synthase component I, N terminal region GCD22_03680 PF00117 Glutamine amidotransferase class-I GCD22_03681 PF02885 Glycosyl transferase family, helical bundle domain GCD22_03681 PF00591 Glycosyl transferase family, a/b domain GCD22_03682 PF00218 Indole-3-glycerol phosphate synthase GCD22_03684 PF02082 Transcriptional regulator GCD22_03685 PF03232 Ubiquinone biosynthesis protein COQ7 GCD22_03687 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GCD22_03688 PF00005 ABC transporter GCD22_03689 PF01061 ABC-2 type transporter GCD22_03691 PF04143 Sulphur transport GCD22_03695 PF00589 Phage integrase family GCD22_03696 PF00216 Bacterial DNA-binding protein GCD22_03699 PF01906 Putative heavy-metal-binding GCD22_03702 PF00535 Glycosyl transferase family 2 GCD22_03704 PF00535 Glycosyl transferase family 2 GCD22_03708 PF00216 Bacterial DNA-binding protein GCD22_03723 PF00313 'Cold-shock' DNA-binding domain GCD22_03724 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GCD22_03724 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GCD22_03725 PF00384 Molybdopterin oxidoreductase GCD22_03727 PF02634 FdhD/NarQ family GCD22_03728 PF00107 Zinc-binding dehydrogenase GCD22_03728 PF08240 Alcohol dehydrogenase GroES-like domain GCD22_03729 PF00756 Putative esterase GCD22_03730 PF00083 Sugar (and other) transporter GCD22_03732 PF00490 Delta-aminolevulinic acid dehydratase GCD22_03734 PF03900 Porphobilinogen deaminase, C-terminal domain GCD22_03734 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GCD22_03735 PF00691 OmpA family GCD22_03737 PF04055 Radical SAM superfamily GCD22_03738 PF06508 Queuosine biosynthesis protein QueC GCD22_03739 PF07676 WD40-like Beta Propeller Repeat GCD22_03739 PF04052 TolB amino-terminal domain GCD22_03741 PF02472 Biopolymer transport protein ExbD/TolR GCD22_03742 PF01618 MotA/TolQ/ExbB proton channel family GCD22_03743 PF03061 Thioesterase superfamily GCD22_03744 PF05491 RuvB C-terminal winged helix domain GCD22_03744 PF05496 Holliday junction DNA helicase RuvB P-loop domain GCD22_03744 PF17864 RuvB AAA lid domain GCD22_03745 PF07499 RuvA, C-terminal domain GCD22_03745 PF01330 RuvA N terminal domain GCD22_03746 PF02075 Crossover junction endodeoxyribonuclease RuvC GCD22_03749 PF02445 Quinolinate synthetase A protein GCD22_03750 PF00293 NUDIX domain GCD22_03751 PF01336 OB-fold nucleic acid binding domain GCD22_03751 PF02938 GAD domain GCD22_03751 PF00152 tRNA synthetases class II (D, K and N) GCD22_03753 PF01914 MarC family integral membrane protein GCD22_03761 PF00083 Sugar (and other) transporter GCD22_03762 PF17912 MalK OB fold domain GCD22_03762 PF00005 ABC transporter GCD22_03765 PF01547 Bacterial extracellular solute-binding protein GCD22_03767 PF02653 Branched-chain amino acid transport system / permease component GCD22_03768 PF00005 ABC transporter GCD22_03769 PF13407 Periplasmic binding protein domain GCD22_03770 PF00294 pfkB family carbohydrate kinase GCD22_03771 PF01624 MutS domain I GCD22_03771 PF05188 MutS domain II GCD22_03771 PF00488 MutS domain V GCD22_03771 PF05190 MutS family domain IV GCD22_03771 PF05192 MutS domain III GCD22_03773 PF05192 MutS domain III GCD22_03773 PF05190 MutS family domain IV GCD22_03773 PF01624 MutS domain I GCD22_03773 PF05188 MutS domain II GCD22_03773 PF00488 MutS domain V GCD22_03774 PF01266 FAD dependent oxidoreductase GCD22_03774 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GCD22_03775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GCD22_03775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GCD22_03776 PF00230 Major intrinsic protein GCD22_03777 PF02733 Dak1 domain GCD22_03778 PF02734 DAK2 domain GCD22_03779 PF00381 PTS HPr component phosphorylation site GCD22_03779 PF02896 PEP-utilising enzyme, TIM barrel domain GCD22_03779 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GCD22_03779 PF05524 PEP-utilising enzyme, N-terminal GCD22_03779 PF00391 PEP-utilising enzyme, mobile domain GCD22_03783 PF00005 ABC transporter GCD22_03783 PF12848 ABC transporter GCD22_03786 PF02463 RecF/RecN/SMC N terminal domain GCD22_03787 PF01420 Type I restriction modification DNA specificity domain GCD22_03788 PF04851 Type III restriction enzyme, res subunit GCD22_03788 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GCD22_03788 PF08463 EcoEI R protein C-terminal GCD22_03788 PF00271 Helicase conserved C-terminal domain GCD22_03790 PF00825 Ribonuclease P GCD22_03792 PF02096 60Kd inner membrane protein GCD22_03792 PF14849 YidC periplasmic domain GCD22_03793 PF01926 50S ribosome-binding GTPase GCD22_03793 PF12631 MnmE helical domain GCD22_03793 PF10396 GTP-binding protein TrmE N-terminus GCD22_03794 PF00011 Hsp20/alpha crystallin family GCD22_03795 PF03279 Bacterial lipid A biosynthesis acyltransferase GCD22_03796 PF01467 Cytidylyltransferase-like GCD22_03798 PF02590 Predicted SPOUT methyltransferase GCD22_03802 PF10150 Ribonuclease E/G family GCD22_03802 PF00575 S1 RNA binding domain GCD22_03805 PF00202 Aminotransferase class-III GCD22_03806 PF02581 Thiamine monophosphate synthase GCD22_03807 PF08543 Phosphomethylpyrimidine kinase GCD22_03807 PF02581 Thiamine monophosphate synthase