ACPOL_0005 SM00947 Carbonic anhydrase ACPOL_0011 SM00382 ATPases associated with a variety of cellular activities ACPOL_0014 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACPOL_0025 SM00849 Metallo-beta-lactamase superfamily ACPOL_0028 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_0028 SM00240 Forkhead associated domain ACPOL_0028 SM00331 Sigma factor PP2C-like phosphatases ACPOL_0032 SM00849 Metallo-beta-lactamase superfamily ACPOL_0037 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPOL_0046 SM00507 HNH nucleases ACPOL_0054 SM00841 Elongation factor P, C-terminal ACPOL_0054 SM01185 ACPOL_0054 ACPOL_0055 SM00028 Tetratricopeptide repeats ACPOL_0057 SM00244 prohibitin homologues ACPOL_0059 SM00563 Phosphate acyltransferases ACPOL_0073 SM00904 Riboflavin kinase ACPOL_0075 SM00957 SecA DEAD-like domain ACPOL_0075 SM00958 SecA preprotein cross-linking domain ACPOL_0109 SM00327 von Willebrand factor (vWF) type A domain ACPOL_0110 SM00327 von Willebrand factor (vWF) type A domain ACPOL_0114 SM00909 Sporulation and spore germination ACPOL_0121 SM00448 cheY-homologous receiver domain ACPOL_0135 SM00382 ATPases associated with a variety of cellular activities ACPOL_0142 SM00382 ATPases associated with a variety of cellular activities ACPOL_0143 SM00448 cheY-homologous receiver domain ACPOL_0143 SM00862 Transcriptional regulatory protein, C terminal ACPOL_0153 SM00998 Adenylosuccinate lyase C-terminus ACPOL_0165 SM01192 ACPOL_0165 ACPOL_0165 SM01193 ACPOL_0165 ACPOL_0174 SM00316 Ribosomal protein S1-like RNA-binding domain ACPOL_0182 SM00825 Beta-ketoacyl synthase ACPOL_0185 SM00028 Tetratricopeptide repeats ACPOL_0186 SM00852 Probable molybdopterin binding domain ACPOL_0198 SM00487 DEAD-like helicases superfamily ACPOL_0198 SM00490 helicase superfamily c-terminal domain ACPOL_0203 SM00852 Probable molybdopterin binding domain ACPOL_0209 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_0216 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ACPOL_0216 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACPOL_0222 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_0229 SM00938 Nitrogen regulatory protein P-II ACPOL_0230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPOL_0243 SM00331 Sigma factor PP2C-like phosphatases ACPOL_0243 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACPOL_0246 SM00267 diguanylate cyclase ACPOL_0247 SM00382 ATPases associated with a variety of cellular activities ACPOL_0247 SM00487 DEAD-like helicases superfamily ACPOL_0247 SM00490 helicase superfamily c-terminal domain ACPOL_0263 SM00822 ACPOL_0263 ACPOL_0270 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_0271 SM00448 cheY-homologous receiver domain ACPOL_0289 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_0290 SM00947 Carbonic anhydrase ACPOL_0294 SM00387 Histidine kinase-like ATPases ACPOL_0298 SM00421 helix_turn_helix, Lux Regulon ACPOL_0298 SM00448 cheY-homologous receiver domain ACPOL_0315 SM00248 ankyrin repeats ACPOL_0323 SM00028 Tetratricopeptide repeats ACPOL_0327 SM00857 Resolvase, N terminal domain ACPOL_0337 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPOL_0338 SM00812 Alpha-L-fucosidase ACPOL_0342 SM00028 Tetratricopeptide repeats ACPOL_0347 SM00758 ACPOL_0347 ACPOL_0347 SM01217 ACPOL_0347 ACPOL_0352 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_0352 SM00331 Sigma factor PP2C-like phosphatases ACPOL_0354 SM00357 Cold shock protein domain ACPOL_0366 SM00357 Cold shock protein domain ACPOL_0375 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACPOL_0375 SM00481 DNA polymerase alpha chain like domain ACPOL_0375 SM00483 DNA polymerase X family ACPOL_0378 SM00267 diguanylate cyclase ACPOL_0380 SM00919 Malic enzyme, NAD binding domain ACPOL_0380 SM01274 ACPOL_0380 ACPOL_0385 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins ACPOL_0393 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPOL_0397 SM00028 Tetratricopeptide repeats ACPOL_0400 SM00028 Tetratricopeptide repeats ACPOL_0404 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins ACPOL_0422 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACPOL_0422 SM00475 5'-3' exonuclease ACPOL_0423 SM00028 Tetratricopeptide repeats ACPOL_0424 SM00822 ACPOL_0424 ACPOL_0430 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_0430 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_0431 SM00448 cheY-homologous receiver domain ACPOL_0434 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPOL_0440 SM00530 Helix-turn-helix XRE-family like proteins ACPOL_0456 SM00421 helix_turn_helix, Lux Regulon ACPOL_0457 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPOL_0458 SM00867 YceI-like domain ACPOL_0464 SM00028 Tetratricopeptide repeats ACPOL_0466 SM00944 Pro-kumamolisin, activation domain ACPOL_0470 SM01152 ACPOL_0470 ACPOL_0487 SM00028 Tetratricopeptide repeats ACPOL_0516 SM00387 Histidine kinase-like ATPases ACPOL_0517 SM00448 cheY-homologous receiver domain ACPOL_0526 SM00822 ACPOL_0526 ACPOL_0528 SM00052 Putative diguanylate phosphodiesterase ACPOL_0528 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPOL_0528 SM00091 PAS domain ACPOL_0535 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_0536 SM00478 endonuclease III ACPOL_0622 SM00822 ACPOL_0622 ACPOL_0624 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPOL_0624 SM01091 Transporter associated domain ACPOL_0631 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_0649 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_0655 SM00822 ACPOL_0655 ACPOL_0659 SM00421 helix_turn_helix, Lux Regulon ACPOL_0659 SM00448 cheY-homologous receiver domain ACPOL_0665 SM00829 Enoylreductase ACPOL_0667 SM00829 Enoylreductase ACPOL_0672 SM00387 Histidine kinase-like ATPases ACPOL_0680 SM00829 Enoylreductase ACPOL_0711 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_0712 SM00387 Histidine kinase-like ATPases ACPOL_0713 SM00421 helix_turn_helix, Lux Regulon ACPOL_0713 SM00448 cheY-homologous receiver domain ACPOL_0732 SM00919 Malic enzyme, NAD binding domain ACPOL_0732 SM01274 ACPOL_0732 ACPOL_0735 SM00944 Pro-kumamolisin, activation domain ACPOL_0746 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_0760 SM00812 Alpha-L-fucosidase ACPOL_0770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_0770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPOL_0770 SM00091 PAS domain ACPOL_0770 SM00387 Histidine kinase-like ATPases ACPOL_0770 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_0770 SM00448 cheY-homologous receiver domain ACPOL_0773 SM00448 cheY-homologous receiver domain ACPOL_0774 SM00331 Sigma factor PP2C-like phosphatases ACPOL_0786 SM00060 Fibronectin type 3 domain ACPOL_0794 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_0794 SM00387 Histidine kinase-like ATPases ACPOL_0794 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_0795 SM00448 cheY-homologous receiver domain ACPOL_0795 SM00862 Transcriptional regulatory protein, C terminal ACPOL_0808 SM00387 Histidine kinase-like ATPases ACPOL_0811 SM00387 Histidine kinase-like ATPases ACPOL_0820 SM00387 Histidine kinase-like ATPases ACPOL_0821 SM00421 helix_turn_helix, Lux Regulon ACPOL_0821 SM00448 cheY-homologous receiver domain ACPOL_0835 SM00226 Low molecular weight phosphatase family ACPOL_0857 SM00642 Alpha-amylase domain ACPOL_0873 SM00813 Alpha-L-arabinofuranosidase C-terminus ACPOL_0888 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_0897 SM00421 helix_turn_helix, Lux Regulon ACPOL_0897 SM00448 cheY-homologous receiver domain ACPOL_0898 SM00387 Histidine kinase-like ATPases ACPOL_0901 SM00028 Tetratricopeptide repeats ACPOL_0908 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACPOL_0914 SM00849 Metallo-beta-lactamase superfamily ACPOL_0921 SM00028 Tetratricopeptide repeats ACPOL_0930 SM00829 Enoylreductase ACPOL_0932 SM00822 ACPOL_0932 ACPOL_0961 SM00248 ankyrin repeats ACPOL_0962 SM00248 ankyrin repeats ACPOL_0979 SM00382 ATPases associated with a variety of cellular activities ACPOL_0980 SM00448 cheY-homologous receiver domain ACPOL_0994 SM00450 Rhodanese Homology Domain ACPOL_0998 SM00448 cheY-homologous receiver domain ACPOL_0998 SM00862 Transcriptional regulatory protein, C terminal ACPOL_0999 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_0999 SM00387 Histidine kinase-like ATPases ACPOL_0999 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_1005 SM00421 helix_turn_helix, Lux Regulon ACPOL_1005 SM00448 cheY-homologous receiver domain ACPOL_1012 SM00354 helix_turn _helix lactose operon repressor ACPOL_1020 SM00327 von Willebrand factor (vWF) type A domain ACPOL_1028 SM00028 Tetratricopeptide repeats ACPOL_1037 SM00271 DnaJ molecular chaperone homology domain ACPOL_1038 SM00422 helix_turn_helix, mercury resistance ACPOL_1045 SM01221 ACPOL_1045 ACPOL_1045 SM01222 ACPOL_1045 ACPOL_1053 SM01211 ACPOL_1053 ACPOL_1056 SM00421 helix_turn_helix, Lux Regulon ACPOL_1056 SM00448 cheY-homologous receiver domain ACPOL_1076 SM00382 ATPases associated with a variety of cellular activities ACPOL_1082 SM00822 ACPOL_1082 ACPOL_1085 SM00756 ACPOL_1085 ACPOL_1087 SM00530 Helix-turn-helix XRE-family like proteins ACPOL_1100 SM00028 Tetratricopeptide repeats ACPOL_1100 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_1106 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_1106 SM00387 Histidine kinase-like ATPases ACPOL_1110 SM01329 ACPOL_1110 ACPOL_1136 SM00357 Cold shock protein domain ACPOL_1138 SM00563 Phosphate acyltransferases ACPOL_1139 SM00354 helix_turn _helix lactose operon repressor ACPOL_1147 SM00382 ATPases associated with a variety of cellular activities ACPOL_1148 SM00829 Enoylreductase ACPOL_1150 SM00822 ACPOL_1150 ACPOL_1153 SM00421 helix_turn_helix, Lux Regulon ACPOL_1153 SM00448 cheY-homologous receiver domain ACPOL_1155 SM00382 ATPases associated with a variety of cellular activities ACPOL_1155 SM00843 ACPOL_1155 ACPOL_1159 SM00849 Metallo-beta-lactamase superfamily ACPOL_1162 SM01130 ACPOL_1162 ACPOL_1165 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACPOL_1167 SM01329 ACPOL_1167 ACPOL_1174 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPOL_1176 SM00341 Helicase and RNase D C-terminal ACPOL_1176 SM00487 DEAD-like helicases superfamily ACPOL_1176 SM00490 helicase superfamily c-terminal domain ACPOL_1181 SM00028 Tetratricopeptide repeats ACPOL_1189 SM00937 ACPOL_1189 ACPOL_1190 SM00881 CoA binding domain ACPOL_1192 SM00463 Small MutS-related domain ACPOL_1192 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ACPOL_1192 SM00534 ATPase domain of DNA mismatch repair MUTS family ACPOL_1199 SM00387 Histidine kinase-like ATPases ACPOL_1204 SM00882 Coenzyme A transferase ACPOL_1205 SM00882 Coenzyme A transferase ACPOL_1207 SM00028 Tetratricopeptide repeats ACPOL_1212 SM00421 helix_turn_helix, Lux Regulon ACPOL_1216 SM00387 Histidine kinase-like ATPases ACPOL_1230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPOL_1230 SM00245 tail specific protease ACPOL_1238 SM00836 DALR anticodon binding domain ACPOL_1238 SM01016 Arginyl tRNA synthetase N terminal dom ACPOL_1245 SM00382 ATPases associated with a variety of cellular activities ACPOL_1248 SM00331 Sigma factor PP2C-like phosphatases ACPOL_1249 SM00704 CDGSH-type zinc finger. Function unknown. ACPOL_1257 SM00464 Found in ATP-dependent protease La (LON) ACPOL_1262 SM00758 ACPOL_1262 ACPOL_1262 SM01217 ACPOL_1262 ACPOL_1265 SM00829 Enoylreductase ACPOL_1266 SM00829 Enoylreductase ACPOL_1280 SM00382 ATPases associated with a variety of cellular activities ACPOL_1280 SM01086 C-terminal, D2-small domain, of ClpB protein ACPOL_1286 SM00937 ACPOL_1286 ACPOL_1288 SM00382 ATPases associated with a variety of cellular activities ACPOL_1288 SM01086 C-terminal, D2-small domain, of ClpB protein ACPOL_1299 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_1307 SM00052 Putative diguanylate phosphodiesterase ACPOL_1312 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_1318 SM00091 PAS domain ACPOL_1318 SM00267 diguanylate cyclase ACPOL_1319 SM01248 ACPOL_1319 ACPOL_1320 SM00382 ATPases associated with a variety of cellular activities ACPOL_1332 SM00849 Metallo-beta-lactamase superfamily ACPOL_1337 SM00968 SMC proteins Flexible Hinge Domain ACPOL_1349 SM00382 ATPases associated with a variety of cellular activities ACPOL_1361 SM00864 Tubulin/FtsZ family, GTPase domain ACPOL_1361 SM00865 Tubulin/FtsZ family, C-terminal domain ACPOL_1362 SM00842 Cell division protein FtsA ACPOL_1381 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPOL_1394 SM00382 ATPases associated with a variety of cellular activities ACPOL_1402 SM00825 Beta-ketoacyl synthase ACPOL_1404 SM00822 ACPOL_1404 ACPOL_1424 SM00967 RNA 2'-O ribose methyltransferase substrate binding ACPOL_1433 SM00529 Helix-turn-helix diphteria tox regulatory element ACPOL_1433 SM00899 ACPOL_1433 ACPOL_1435 SM00642 Alpha-amylase domain ACPOL_1438 SM00387 Histidine kinase-like ATPases ACPOL_1438 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_1439 SM00448 cheY-homologous receiver domain ACPOL_1439 SM00862 Transcriptional regulatory protein, C terminal ACPOL_1440 SM00346 helix_turn_helix isocitrate lyase regulation ACPOL_1441 SM00849 Metallo-beta-lactamase superfamily ACPOL_1442 SM00358 Double-stranded RNA binding motif ACPOL_1442 SM00535 Ribonuclease III family ACPOL_1447 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPOL_1449 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPOL_1449 SM00954 Region found in RelA / SpoT proteins ACPOL_1452 SM00354 helix_turn _helix lactose operon repressor ACPOL_1453 SM00382 ATPases associated with a variety of cellular activities ACPOL_1457 SM00487 DEAD-like helicases superfamily ACPOL_1457 SM00490 helicase superfamily c-terminal domain ACPOL_1457 SM00982 ACPOL_1457 ACPOL_1457 SM01058 CarD-like/TRCF domain ACPOL_1459 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPOL_1473 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ACPOL_1473 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ACPOL_1474 SM00649 Ribosomal protein L11/L12 ACPOL_1479 SM00829 Enoylreductase ACPOL_1490 SM01133 ACPOL_1490 ACPOL_1493 SM00387 Histidine kinase-like ATPases ACPOL_1494 SM00382 ATPases associated with a variety of cellular activities ACPOL_1494 SM00448 cheY-homologous receiver domain ACPOL_1498 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_1501 SM00852 Probable molybdopterin binding domain ACPOL_1510 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. ACPOL_1512 SM00861 Transketolase, pyrimidine binding domain ACPOL_1521 SM00518 AP endonuclease family 2 ACPOL_1526 SM00886 Stress responsive A/B Barrel Domain ACPOL_1530 SM00028 Tetratricopeptide repeats ACPOL_1534 SM00967 RNA 2'-O ribose methyltransferase substrate binding ACPOL_1539 SM00448 cheY-homologous receiver domain ACPOL_1539 SM00850 LytTr DNA-binding domain ACPOL_1540 SM00893 Electron transfer flavoprotein domain ACPOL_1542 SM00893 Electron transfer flavoprotein domain ACPOL_1547 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_1547 SM00267 diguanylate cyclase ACPOL_1549 SM00382 ATPases associated with a variety of cellular activities ACPOL_1563 SM00996 S-adenosyl-L-homocysteine hydrolase ACPOL_1563 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACPOL_1564 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPOL_1565 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPOL_1566 SM00822 ACPOL_1566 ACPOL_1575 SM00944 Pro-kumamolisin, activation domain ACPOL_1576 SM00028 Tetratricopeptide repeats ACPOL_1578 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPOL_1579 SM00267 diguanylate cyclase ACPOL_1579 SM00448 cheY-homologous receiver domain ACPOL_1580 SM00073 Histidine Phosphotransfer domain ACPOL_1580 SM00387 Histidine kinase-like ATPases ACPOL_1580 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_1580 SM00448 cheY-homologous receiver domain ACPOL_1581 SM00564 beta-propeller repeat ACPOL_1585 SM00944 Pro-kumamolisin, activation domain ACPOL_1598 SM00460 Transglutaminase/protease-like homologues ACPOL_1605 SM00028 Tetratricopeptide repeats ACPOL_1606 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPOL_1623 SM00636 ACPOL_1623 ACPOL_1624 SM01209 ACPOL_1624 ACPOL_1624 SM01210 ACPOL_1624 ACPOL_1627 SM00845 GatB domain ACPOL_1632 SM00232 JAB/MPN domain ACPOL_1634 SM00450 Rhodanese Homology Domain ACPOL_1635 SM00670 Large family of predicted nucleotide-binding domains ACPOL_1637 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPOL_1637 SM00091 PAS domain ACPOL_1637 SM00387 Histidine kinase-like ATPases ACPOL_1637 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_1654 SM00478 endonuclease III ACPOL_1658 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACPOL_1664 SM00091 PAS domain ACPOL_1664 SM00267 diguanylate cyclase ACPOL_1665 SM00642 Alpha-amylase domain ACPOL_1672 SM00382 ATPases associated with a variety of cellular activities ACPOL_1680 SM01400 ACPOL_1680 ACPOL_1683 SM00518 AP endonuclease family 2 ACPOL_1693 SM00947 Carbonic anhydrase ACPOL_1698 SM01126 ACPOL_1698 ACPOL_1704 SM01120 ACPOL_1704 ACPOL_1707 SM00460 Transglutaminase/protease-like homologues ACPOL_1709 SM00248 ankyrin repeats ACPOL_1714 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACPOL_1717 SM00357 Cold shock protein domain ACPOL_1717 SM00382 ATPases associated with a variety of cellular activities ACPOL_1717 SM00959 Rho termination factor, N-terminal domain ACPOL_1721 SM00382 ATPases associated with a variety of cellular activities ACPOL_1722 SM01217 ACPOL_1722 ACPOL_1727 SM00271 DnaJ molecular chaperone homology domain ACPOL_1730 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACPOL_1730 SM00475 5'-3' exonuclease ACPOL_1730 SM00482 DNA polymerase A domain ACPOL_1736 SM00382 ATPases associated with a variety of cellular activities ACPOL_1737 SM01266 ACPOL_1737 ACPOL_1738 SM00487 DEAD-like helicases superfamily ACPOL_1738 SM00490 helicase superfamily c-terminal domain ACPOL_1745 SM00411 bacterial (prokaryotic) histone like domain ACPOL_1750 SM00450 Rhodanese Homology Domain ACPOL_1752 SM00331 Sigma factor PP2C-like phosphatases ACPOL_1753 SM00382 ATPases associated with a variety of cellular activities ACPOL_1753 SM00448 cheY-homologous receiver domain ACPOL_1754 SM00387 Histidine kinase-like ATPases ACPOL_1754 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_1757 SM00363 S4 RNA-binding domain ACPOL_1773 SM00257 Lysin motif ACPOL_1775 SM00935 Outer membrane protein (OmpH-like) ACPOL_1784 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_1784 SM00387 Histidine kinase-like ATPases ACPOL_1784 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_1788 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_1797 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen ACPOL_1804 SM01350 ACPOL_1804 ACPOL_1806 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_1822 SM00822 ACPOL_1822 ACPOL_1844 SM01060 ACPOL_1844 ACPOL_1855 SM00862 Transcriptional regulatory protein, C terminal ACPOL_1859 SM00919 Malic enzyme, NAD binding domain ACPOL_1859 SM01274 ACPOL_1859 ACPOL_1869 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACPOL_1870 SM01092 CO dehydrogenase flavoprotein C-terminal domain ACPOL_1895 SM00944 Pro-kumamolisin, activation domain ACPOL_1899 SM00387 Histidine kinase-like ATPases ACPOL_1899 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_1900 SM00448 cheY-homologous receiver domain ACPOL_1900 SM00862 Transcriptional regulatory protein, C terminal ACPOL_1907 SM01018 B12 binding domain ACPOL_1911 SM00382 ATPases associated with a variety of cellular activities ACPOL_1920 SM00567 E-Z type HEAT repeats ACPOL_1921 SM00448 cheY-homologous receiver domain ACPOL_1921 SM00862 Transcriptional regulatory protein, C terminal ACPOL_1934 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_1934 SM00382 ATPases associated with a variety of cellular activities ACPOL_1950 SM00028 Tetratricopeptide repeats ACPOL_1952 SM00028 Tetratricopeptide repeats ACPOL_1955 SM00028 Tetratricopeptide repeats ACPOL_1959 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACPOL_1974 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_1975 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPOL_1982 SM00986 Uracil DNA glycosylase superfamily ACPOL_1982 SM00987 UreE urease accessory protein, C-terminal domain ACPOL_1988 SM00834 Putative regulatory protein ACPOL_2003 SM00758 ACPOL_2003 ACPOL_2003 SM01217 ACPOL_2003 ACPOL_2005 SM00387 Histidine kinase-like ATPases ACPOL_2007 SM00421 helix_turn_helix, Lux Regulon ACPOL_2007 SM00448 cheY-homologous receiver domain ACPOL_2014 SM00830 Chorismate mutase type II ACPOL_2025 SM00642 Alpha-amylase domain ACPOL_2026 SM01235 ACPOL_2026 ACPOL_2030 SM00382 ATPases associated with a variety of cellular activities ACPOL_2044 SM00354 helix_turn _helix lactose operon repressor ACPOL_2053 SM00382 ATPases associated with a variety of cellular activities ACPOL_2053 SM00760 Bacterial dnaA protein helix-turn-helix domain ACPOL_2058 SM00393 Putative single-stranded nucleic acids-binding domain ACPOL_2061 SM00387 Histidine kinase-like ATPases ACPOL_2061 SM00448 cheY-homologous receiver domain ACPOL_2062 SM00448 cheY-homologous receiver domain ACPOL_2063 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPOL_2063 SM00091 PAS domain ACPOL_2063 SM00387 Histidine kinase-like ATPases ACPOL_2063 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_2080 SM00567 E-Z type HEAT repeats ACPOL_2087 SM00382 ATPases associated with a variety of cellular activities ACPOL_2095 SM01005 Alanine racemase, C-terminal domain ACPOL_2096 SM00411 bacterial (prokaryotic) histone like domain ACPOL_2106 SM00382 ATPases associated with a variety of cellular activities ACPOL_2111 SM00387 Histidine kinase-like ATPases ACPOL_2112 SM00421 helix_turn_helix, Lux Regulon ACPOL_2112 SM00448 cheY-homologous receiver domain ACPOL_2118 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ACPOL_2118 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ACPOL_2121 SM00091 PAS domain ACPOL_2121 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_2121 SM00387 Histidine kinase-like ATPases ACPOL_2121 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_2122 SM00382 ATPases associated with a variety of cellular activities ACPOL_2122 SM00448 cheY-homologous receiver domain ACPOL_2136 SM01217 ACPOL_2136 ACPOL_2140 SM00014 Acid phosphatase homologues ACPOL_2141 SM00028 Tetratricopeptide repeats ACPOL_2141 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_2153 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACPOL_2163 SM00257 Lysin motif ACPOL_2165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPOL_2165 SM00245 tail specific protease ACPOL_2168 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPOL_2177 SM00740 ACPOL_2177 ACPOL_2180 SM00450 Rhodanese Homology Domain ACPOL_2181 SM00478 endonuclease III ACPOL_2192 SM00710 Parallel beta-helix repeats ACPOL_2215 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_2217 SM00862 Transcriptional regulatory protein, C terminal ACPOL_2220 SM00363 S4 RNA-binding domain ACPOL_2225 SM00422 helix_turn_helix, mercury resistance ACPOL_2232 SM00028 Tetratricopeptide repeats ACPOL_2257 SM00429 ig-like, plexins, transcription factors ACPOL_2258 SM00480 DNA polymerase III beta subunit ACPOL_2271 SM00091 PAS domain ACPOL_2271 SM00862 Transcriptional regulatory protein, C terminal ACPOL_2279 SM00448 cheY-homologous receiver domain ACPOL_2279 SM00862 Transcriptional regulatory protein, C terminal ACPOL_2280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_2280 SM00387 Histidine kinase-like ATPases ACPOL_2280 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_2283 SM00382 ATPases associated with a variety of cellular activities ACPOL_2284 SM00470 ParB-like nuclease domain ACPOL_2288 SM00563 Phosphate acyltransferases ACPOL_2302 SM01323 ACPOL_2302 ACPOL_2310 SM00028 Tetratricopeptide repeats ACPOL_2311 SM00878 Biotin carboxylase C-terminal domain ACPOL_2318 SM00387 Histidine kinase-like ATPases ACPOL_2318 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_2328 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_2335 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPOL_2335 SM01091 Transporter associated domain ACPOL_2340 SM00382 ATPases associated with a variety of cellular activities ACPOL_2343 SM00448 cheY-homologous receiver domain ACPOL_2349 SM00953 ACPOL_2349 ACPOL_2354 SM00382 ATPases associated with a variety of cellular activities ACPOL_2362 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACPOL_2362 SM00292 breast cancer carboxy-terminal domain ACPOL_2362 SM00532 Ligase N family ACPOL_2363 SM00327 von Willebrand factor (vWF) type A domain ACPOL_2369 SM00872 Alpha mannosidase, middle domain ACPOL_2370 SM00028 Tetratricopeptide repeats ACPOL_2373 SM00354 helix_turn _helix lactose operon repressor ACPOL_2374 SM00822 ACPOL_2374 ACPOL_2377 SM00028 Tetratricopeptide repeats ACPOL_2388 SM00028 Tetratricopeptide repeats ACPOL_2401 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_2409 SM00382 ATPases associated with a variety of cellular activities ACPOL_2412 SM01007 Class II Aldolase and Adducin N-terminal domain ACPOL_2421 SM00984 UDP binding domain ACPOL_2422 SM00986 Uracil DNA glycosylase superfamily ACPOL_2422 SM00987 UreE urease accessory protein, C-terminal domain ACPOL_2431 SM00411 bacterial (prokaryotic) histone like domain ACPOL_2433 SM00487 DEAD-like helicases superfamily ACPOL_2433 SM00490 helicase superfamily c-terminal domain ACPOL_2434 SM00986 Uracil DNA glycosylase superfamily ACPOL_2434 SM00987 UreE urease accessory protein, C-terminal domain ACPOL_2436 SM01409 ACPOL_2436 ACPOL_2437 SM00072 Guanylate kinase homologues. ACPOL_2439 SM00382 ATPases associated with a variety of cellular activities ACPOL_2444 SM00382 ATPases associated with a variety of cellular activities ACPOL_2450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPOL_2462 SM00155 Phospholipase D. Active site motifs. ACPOL_2463 SM00382 ATPases associated with a variety of cellular activities ACPOL_2471 SM00823 Phosphopantetheine attachment site ACPOL_2481 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_2492 SM00825 Beta-ketoacyl synthase ACPOL_2499 SM00642 Alpha-amylase domain ACPOL_2504 SM00564 beta-propeller repeat ACPOL_2506 SM00710 Parallel beta-helix repeats ACPOL_2512 SM00344 helix_turn_helix ASNC type ACPOL_2517 SM00387 Histidine kinase-like ATPases ACPOL_2524 SM00354 helix_turn _helix lactose operon repressor ACPOL_2532 SM00382 ATPases associated with a variety of cellular activities ACPOL_2539 SM00327 von Willebrand factor (vWF) type A domain ACPOL_2545 SM00458 Ricin-type beta-trefoil ACPOL_2546 SM00327 von Willebrand factor (vWF) type A domain ACPOL_2549 SM00812 Alpha-L-fucosidase ACPOL_2565 SM00636 ACPOL_2565 ACPOL_2571 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPOL_2571 SM00866 ACPOL_2571 ACPOL_2574 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_2578 SM00830 Chorismate mutase type II ACPOL_2580 SM00421 helix_turn_helix, Lux Regulon ACPOL_2580 SM00448 cheY-homologous receiver domain ACPOL_2583 SM00387 Histidine kinase-like ATPases ACPOL_2583 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_2585 SM00829 Enoylreductase ACPOL_2592 SM00387 Histidine kinase-like ATPases ACPOL_2592 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_2607 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_2609 SM00822 ACPOL_2609 ACPOL_2616 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_2619 SM00822 ACPOL_2619 ACPOL_2627 SM00872 Alpha mannosidase, middle domain ACPOL_2630 SM00354 helix_turn _helix lactose operon repressor ACPOL_2653 SM00944 Pro-kumamolisin, activation domain ACPOL_2654 SM00267 diguanylate cyclase ACPOL_2655 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_2655 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_2677 SM00091 PAS domain ACPOL_2678 SM00267 diguanylate cyclase ACPOL_2693 SM00612 ACPOL_2693 ACPOL_2702 SM00382 ATPases associated with a variety of cellular activities ACPOL_2729 SM00331 Sigma factor PP2C-like phosphatases ACPOL_2734 SM00458 Ricin-type beta-trefoil ACPOL_2742 SM00822 ACPOL_2742 ACPOL_2756 SM00829 Enoylreductase ACPOL_2771 SM00354 helix_turn _helix lactose operon repressor ACPOL_2778 SM01149 ACPOL_2778 ACPOL_2780 SM00354 helix_turn _helix lactose operon repressor ACPOL_2782 SM00028 Tetratricopeptide repeats ACPOL_2793 SM00028 Tetratricopeptide repeats ACPOL_2833 SM00829 Enoylreductase ACPOL_2837 SM00849 Metallo-beta-lactamase superfamily ACPOL_2846 SM00470 ParB-like nuclease domain ACPOL_2855 SM00829 Enoylreductase ACPOL_2859 SM00450 Rhodanese Homology Domain ACPOL_2860 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_2861 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_2862 SM00829 Enoylreductase ACPOL_2873 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_2888 SM00822 ACPOL_2888 ACPOL_2893 SM00642 Alpha-amylase domain ACPOL_2899 SM00382 ATPases associated with a variety of cellular activities ACPOL_2920 SM00091 PAS domain ACPOL_2920 SM00387 Histidine kinase-like ATPases ACPOL_2920 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_2932 SM00354 helix_turn _helix lactose operon repressor ACPOL_2947 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_2953 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_2953 SM00091 PAS domain ACPOL_2957 SM00028 Tetratricopeptide repeats ACPOL_2963 SM00458 Ricin-type beta-trefoil ACPOL_2973 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPOL_2987 SM00448 cheY-homologous receiver domain ACPOL_2987 SM00850 LytTr DNA-binding domain ACPOL_2997 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_3017 SM00450 Rhodanese Homology Domain ACPOL_3018 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_3021 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPOL_3029 SM00829 Enoylreductase ACPOL_3040 SM00829 Enoylreductase ACPOL_3044 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_3044 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_3046 SM00387 Histidine kinase-like ATPases ACPOL_3046 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_3052 SM00835 Cupin ACPOL_3073 SM00448 cheY-homologous receiver domain ACPOL_3074 SM00642 Alpha-amylase domain ACPOL_3125 SM00822 ACPOL_3125 ACPOL_3143 SM00421 helix_turn_helix, Lux Regulon ACPOL_3143 SM00448 cheY-homologous receiver domain ACPOL_3144 SM00387 Histidine kinase-like ATPases ACPOL_3145 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_3149 SM00822 ACPOL_3149 ACPOL_3157 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_3159 SM00829 Enoylreductase ACPOL_3177 SM00953 ACPOL_3177 ACPOL_3179 SM00829 Enoylreductase ACPOL_3197 SM00822 ACPOL_3197 ACPOL_3202 SM00822 ACPOL_3202 ACPOL_3205 SM01230 ACPOL_3205 ACPOL_3212 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_3213 SM00331 Sigma factor PP2C-like phosphatases ACPOL_3213 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACPOL_3219 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACPOL_3221 SM00028 Tetratricopeptide repeats ACPOL_3229 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACPOL_3238 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACPOL_3253 SM00829 Enoylreductase ACPOL_3259 SM00422 helix_turn_helix, mercury resistance ACPOL_3261 SM00028 Tetratricopeptide repeats ACPOL_3280 SM00028 Tetratricopeptide repeats ACPOL_3284 SM00060 Fibronectin type 3 domain ACPOL_3285 SM00060 Fibronectin type 3 domain ACPOL_3285 SM00409 Immunoglobulin ACPOL_3286 SM00060 Fibronectin type 3 domain ACPOL_3287 SM00060 Fibronectin type 3 domain ACPOL_3306 SM00052 Putative diguanylate phosphodiesterase ACPOL_3306 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPOL_3306 SM00091 PAS domain ACPOL_3310 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPOL_3315 SM00813 Alpha-L-arabinofuranosidase C-terminus ACPOL_3321 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_3356 SM00354 helix_turn _helix lactose operon repressor ACPOL_3361 SM00420 helix_turn_helix, Deoxyribose operon repressor ACPOL_3361 SM01134 ACPOL_3361 ACPOL_3367 SM00633 Glycosyl hydrolase family 10 ACPOL_3382 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_3382 SM00862 Transcriptional regulatory protein, C terminal ACPOL_3413 SM00354 helix_turn _helix lactose operon repressor ACPOL_3416 SM00813 Alpha-L-arabinofuranosidase C-terminus ACPOL_3418 SM00872 Alpha mannosidase, middle domain ACPOL_3425 SM00822 ACPOL_3425 ACPOL_3439 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_3446 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_3471 SM00363 S4 RNA-binding domain ACPOL_3486 SM00382 ATPases associated with a variety of cellular activities ACPOL_3489 SM00382 ATPases associated with a variety of cellular activities ACPOL_3489 SM00448 cheY-homologous receiver domain ACPOL_3490 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_3490 SM00091 PAS domain ACPOL_3490 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPOL_3490 SM00387 Histidine kinase-like ATPases ACPOL_3490 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_3494 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ACPOL_3494 SM01232 ACPOL_3494 ACPOL_3497 SM00838 Elongation factor G C-terminus ACPOL_3497 SM00889 Elongation factor G, domain IV ACPOL_3500 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_3504 SM00354 helix_turn _helix lactose operon repressor ACPOL_3506 SM00028 Tetratricopeptide repeats ACPOL_3509 SM01119 ACPOL_3509 ACPOL_3522 SM00245 tail specific protease ACPOL_3525 SM00564 beta-propeller repeat ACPOL_3528 SM00387 Histidine kinase-like ATPases ACPOL_3529 SM00421 helix_turn_helix, Lux Regulon ACPOL_3529 SM00448 cheY-homologous receiver domain ACPOL_3531 SM00382 ATPases associated with a variety of cellular activities ACPOL_3538 SM00052 Putative diguanylate phosphodiesterase ACPOL_3538 SM00267 diguanylate cyclase ACPOL_3541 SM00346 helix_turn_helix isocitrate lyase regulation ACPOL_3547 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPOL_3554 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPOL_3570 SM00316 Ribosomal protein S1-like RNA-binding domain ACPOL_3570 SM00357 Cold shock protein domain ACPOL_3570 SM00955 ACPOL_3570 ACPOL_3573 SM00316 Ribosomal protein S1-like RNA-binding domain ACPOL_3585 SM00052 Putative diguanylate phosphodiesterase ACPOL_3585 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_3585 SM00267 diguanylate cyclase ACPOL_3588 SM00028 Tetratricopeptide repeats ACPOL_3588 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_3592 SM00387 Histidine kinase-like ATPases ACPOL_3594 SM00448 cheY-homologous receiver domain ACPOL_3595 SM00421 helix_turn_helix, Lux Regulon ACPOL_3601 SM00073 Histidine Phosphotransfer domain ACPOL_3601 SM00260 Two component signalling adaptor domain ACPOL_3601 SM00387 Histidine kinase-like ATPases ACPOL_3601 SM01231 ACPOL_3601 ACPOL_3602 SM00260 Two component signalling adaptor domain ACPOL_3603 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPOL_3603 SM00091 PAS domain ACPOL_3603 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPOL_3605 SM00448 cheY-homologous receiver domain ACPOL_3606 SM00448 cheY-homologous receiver domain ACPOL_3607 SM00138 Methyltransferase, chemotaxis proteins ACPOL_3609 SM00881 CoA binding domain ACPOL_3624 SM01060 ACPOL_3624 ACPOL_3628 SM00382 ATPases associated with a variety of cellular activities ACPOL_3631 SM00028 Tetratricopeptide repeats ACPOL_3643 SM00824 Thioesterase ACPOL_3660 SM00060 Fibronectin type 3 domain ACPOL_3660 SM00637 ACPOL_3660 ACPOL_3675 SM00563 Phosphate acyltransferases ACPOL_3684 SM00382 ATPases associated with a variety of cellular activities ACPOL_3685 SM00028 Tetratricopeptide repeats ACPOL_3686 SM00813 Alpha-L-arabinofuranosidase C-terminus ACPOL_3689 SM00387 Histidine kinase-like ATPases ACPOL_3690 SM00421 helix_turn_helix, Lux Regulon ACPOL_3690 SM00448 cheY-homologous receiver domain ACPOL_3693 SM00028 Tetratricopeptide repeats ACPOL_3698 SM01359 ACPOL_3698 ACPOL_3698 SM01360 ACPOL_3698 ACPOL_3707 SM00849 Metallo-beta-lactamase superfamily ACPOL_3714 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_3715 SM00478 endonuclease III ACPOL_3715 SM01009 AlkA N-terminal domain ACPOL_3729 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_3735 SM00448 cheY-homologous receiver domain ACPOL_3735 SM00862 Transcriptional regulatory protein, C terminal ACPOL_3736 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_3736 SM00387 Histidine kinase-like ATPases ACPOL_3736 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_3749 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_3750 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_3751 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_3753 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_3762 SM00829 Enoylreductase ACPOL_3766 SM00640 Glycosyl hydrolases family 32 ACPOL_3780 SM00382 ATPases associated with a variety of cellular activities ACPOL_3790 SM00400 zinc finger ACPOL_3790 SM00493 ACPOL_3790 ACPOL_3798 SM00387 Histidine kinase-like ATPases ACPOL_3798 SM00433 TopoisomeraseII ACPOL_3805 SM00562 ACPOL_3805 ACPOL_3809 SM00862 Transcriptional regulatory protein, C terminal ACPOL_3813 SM00327 von Willebrand factor (vWF) type A domain ACPOL_3836 SM00663 RNA polymerase I subunit A N-terminus ACPOL_3848 SM00636 ACPOL_3848 ACPOL_3855 SM00822 ACPOL_3855 ACPOL_3868 SM00966 SpoVT / AbrB like domain ACPOL_3879 SM00060 Fibronectin type 3 domain ACPOL_3881 SM00530 Helix-turn-helix XRE-family like proteins ACPOL_3900 SM01011 Aminopeptidase P, N-terminal domain ACPOL_3906 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_3916 SM01058 CarD-like/TRCF domain ACPOL_3932 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ACPOL_3932 SM01232 ACPOL_3932 ACPOL_3933 SM00788 Adenylosuccinate synthetase ACPOL_3939 SM00840 ACPOL_3939 ACPOL_3943 SM01057 Eukaryotic-type carbonic anhydrase ACPOL_3944 SM00944 Pro-kumamolisin, activation domain ACPOL_3962 SM00849 Metallo-beta-lactamase superfamily ACPOL_3970 SM00382 ATPases associated with a variety of cellular activities ACPOL_3970 SM00994 ClpX C4-type zinc finger ACPOL_3970 SM01086 C-terminal, D2-small domain, of ClpB protein ACPOL_3971 SM00382 ATPases associated with a variety of cellular activities ACPOL_3971 SM00464 Found in ATP-dependent protease La (LON) ACPOL_3973 SM00354 helix_turn _helix lactose operon repressor ACPOL_3977 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACPOL_3988 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_3991 SM00822 ACPOL_3991 ACPOL_3992 SM00822 ACPOL_3992 ACPOL_4002 SM00633 Glycosyl hydrolase family 10 ACPOL_4013 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_4024 SM00354 helix_turn _helix lactose operon repressor ACPOL_4027 SM01217 ACPOL_4027 ACPOL_4028 SM00822 ACPOL_4028 ACPOL_4029 SM00829 Enoylreductase ACPOL_4033 SM00829 Enoylreductase ACPOL_4035 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPOL_4035 SM00895 ACPOL_4035 ACPOL_4036 SM00813 Alpha-L-arabinofuranosidase C-terminus ACPOL_4051 SM00387 Histidine kinase-like ATPases ACPOL_4051 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_4056 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPOL_4059 SM00244 prohibitin homologues ACPOL_4066 SM00028 Tetratricopeptide repeats ACPOL_4074 SM00944 Pro-kumamolisin, activation domain ACPOL_4080 SM00028 Tetratricopeptide repeats ACPOL_4080 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_4082 SM00331 Sigma factor PP2C-like phosphatases ACPOL_4082 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACPOL_4096 SM00382 ATPases associated with a variety of cellular activities ACPOL_4096 SM01086 C-terminal, D2-small domain, of ClpB protein ACPOL_4101 SM00835 Cupin ACPOL_4105 SM00813 Alpha-L-arabinofuranosidase C-terminus ACPOL_4106 SM00646 ACPOL_4106 ACPOL_4107 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACPOL_4113 SM00861 Transketolase, pyrimidine binding domain ACPOL_4126 SM00861 Transketolase, pyrimidine binding domain ACPOL_4133 SM00465 GIY-YIG type nucleases (URI domain) ACPOL_4137 SM00382 ATPases associated with a variety of cellular activities ACPOL_4145 SM00984 UDP binding domain ACPOL_4159 SM00899 ACPOL_4159 ACPOL_4162 SM00382 ATPases associated with a variety of cellular activities ACPOL_4166 SM00382 ATPases associated with a variety of cellular activities ACPOL_4179 SM00267 diguanylate cyclase ACPOL_4191 SM00642 Alpha-amylase domain ACPOL_4192 SM00841 Elongation factor P, C-terminal ACPOL_4192 SM01185 ACPOL_4192 ACPOL_4194 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_4195 SM00855 Phosphoglycerate mutase family ACPOL_4228 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_4241 SM00812 Alpha-L-fucosidase ACPOL_4244 SM00387 Histidine kinase-like ATPases ACPOL_4244 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_4244 SM00448 cheY-homologous receiver domain ACPOL_4260 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPOL_4265 SM00822 ACPOL_4265 ACPOL_4266 SM00822 ACPOL_4266 ACPOL_4295 SM01004 Delta-aminolevulinic acid dehydratase ACPOL_4301 SM01001 AIR carboxylase ACPOL_4326 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_4326 SM00331 Sigma factor PP2C-like phosphatases ACPOL_4332 SM00838 Elongation factor G C-terminus ACPOL_4338 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_4338 SM00387 Histidine kinase-like ATPases ACPOL_4338 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_4339 SM00448 cheY-homologous receiver domain ACPOL_4339 SM00862 Transcriptional regulatory protein, C terminal ACPOL_4345 SM00028 Tetratricopeptide repeats ACPOL_4345 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_4349 SM00944 Pro-kumamolisin, activation domain ACPOL_4351 SM00862 Transcriptional regulatory protein, C terminal ACPOL_4352 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_4361 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_4364 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_4366 SM00421 helix_turn_helix, Lux Regulon ACPOL_4367 SM00387 Histidine kinase-like ATPases ACPOL_4386 SM00448 cheY-homologous receiver domain ACPOL_4386 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPOL_4394 SM00853 MutL C terminal dimerisation domain ACPOL_4394 SM01340 ACPOL_4394 ACPOL_4415 SM00421 helix_turn_helix, Lux Regulon ACPOL_4418 SM00564 beta-propeller repeat ACPOL_4419 SM00564 beta-propeller repeat ACPOL_4423 SM00862 Transcriptional regulatory protein, C terminal ACPOL_4425 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_4436 SM00382 ATPases associated with a variety of cellular activities ACPOL_4436 SM00962 SRP54-type protein, GTPase domain ACPOL_4436 SM00963 SRP54-type protein, helical bundle domain ACPOL_4439 SM01207 ACPOL_4439 ACPOL_4445 SM00046 Diacylglycerol kinase catalytic domain (presumed) ACPOL_4458 SM00382 ATPases associated with a variety of cellular activities ACPOL_4460 SM00363 S4 RNA-binding domain ACPOL_4473 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ACPOL_4473 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ACPOL_4473 SM00493 ACPOL_4473 ACPOL_4477 SM00382 ATPases associated with a variety of cellular activities ACPOL_4477 SM00962 SRP54-type protein, GTPase domain ACPOL_4477 SM00963 SRP54-type protein, helical bundle domain ACPOL_4486 SM01092 CO dehydrogenase flavoprotein C-terminal domain ACPOL_4487 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACPOL_4490 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_4495 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPOL_4495 SM00091 PAS domain ACPOL_4495 SM00387 Histidine kinase-like ATPases ACPOL_4495 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_4507 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_4508 SM00829 Enoylreductase ACPOL_4517 SM00822 ACPOL_4517 ACPOL_4521 SM00857 Resolvase, N terminal domain ACPOL_4524 SM00448 cheY-homologous receiver domain ACPOL_4527 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_4527 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_4530 SM00382 ATPases associated with a variety of cellular activities ACPOL_4534 SM00248 ankyrin repeats ACPOL_4540 SM00530 Helix-turn-helix XRE-family like proteins ACPOL_4574 SM00829 Enoylreductase ACPOL_4579 SM00421 helix_turn_helix, Lux Regulon ACPOL_4579 SM00448 cheY-homologous receiver domain ACPOL_4580 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_4580 SM00387 Histidine kinase-like ATPases ACPOL_4582 SM00829 Enoylreductase ACPOL_4613 SM01217 ACPOL_4613 ACPOL_4614 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_4624 SM00028 Tetratricopeptide repeats ACPOL_4634 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_4635 SM00028 Tetratricopeptide repeats ACPOL_4647 SM00606 Cellulose Binding Domain Type IV ACPOL_4655 SM00060 Fibronectin type 3 domain ACPOL_4659 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_4667 SM00829 Enoylreductase ACPOL_4673 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_4673 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_4680 SM00421 helix_turn_helix, Lux Regulon ACPOL_4680 SM00448 cheY-homologous receiver domain ACPOL_4681 SM00387 Histidine kinase-like ATPases ACPOL_4684 SM00028 Tetratricopeptide repeats ACPOL_4716 SM00953 ACPOL_4716 ACPOL_4723 SM00382 ATPases associated with a variety of cellular activities ACPOL_4763 SM00052 Putative diguanylate phosphodiesterase ACPOL_4763 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPOL_4763 SM00091 PAS domain ACPOL_4763 SM00267 diguanylate cyclase ACPOL_4782 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPOL_4802 SM01060 ACPOL_4802 ACPOL_4807 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPOL_4807 SM00382 ATPases associated with a variety of cellular activities ACPOL_4821 SM00420 helix_turn_helix, Deoxyribose operon repressor ACPOL_4821 SM01134 ACPOL_4821 ACPOL_4830 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_4833 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_4840 SM00710 Parallel beta-helix repeats ACPOL_4846 SM00822 ACPOL_4846 ACPOL_4873 SM01321 ACPOL_4873 ACPOL_4894 SM00028 Tetratricopeptide repeats ACPOL_4906 SM00487 DEAD-like helicases superfamily ACPOL_4906 SM00491 ACPOL_4906 ACPOL_4916 SM00838 Elongation factor G C-terminus ACPOL_4916 SM00889 Elongation factor G, domain IV ACPOL_4919 SM01403 ACPOL_4919 ACPOL_4923 SM01382 ACPOL_4923 ACPOL_4923 SM01383 ACPOL_4923 ACPOL_4926 SM00322 K homology RNA-binding domain ACPOL_4930 SM01374 ACPOL_4930 ACPOL_4931 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ACPOL_4943 SM00316 Ribosomal protein S1-like RNA-binding domain ACPOL_4948 SM00363 S4 RNA-binding domain ACPOL_4948 SM01390 ACPOL_4948 ACPOL_4949 SM00662 RNA polymerases D ACPOL_4951 SM00331 Sigma factor PP2C-like phosphatases ACPOL_4953 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPOL_4953 SM01240 ACPOL_4953 ACPOL_4955 SM00316 Ribosomal protein S1-like RNA-binding domain ACPOL_4955 SM00322 K homology RNA-binding domain ACPOL_4958 SM00382 ATPases associated with a variety of cellular activities ACPOL_4961 SM00382 ATPases associated with a variety of cellular activities ACPOL_4963 SM00382 ATPases associated with a variety of cellular activities ACPOL_4963 SM00448 cheY-homologous receiver domain ACPOL_4964 SM00387 Histidine kinase-like ATPases ACPOL_4973 SM00880 ACPOL_4973 ACPOL_4978 SM00650 Ribosomal RNA adenine dimethylases ACPOL_4986 SM00155 Phospholipase D. Active site motifs. ACPOL_5006 SM00091 PAS domain ACPOL_5006 SM00387 Histidine kinase-like ATPases ACPOL_5006 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_5007 SM00382 ATPases associated with a variety of cellular activities ACPOL_5014 SM00434 DNA Topoisomerase IV ACPOL_5016 SM00448 cheY-homologous receiver domain ACPOL_5017 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_5022 SM00849 Metallo-beta-lactamase superfamily ACPOL_5025 SM00944 Pro-kumamolisin, activation domain ACPOL_5035 SM01228 ACPOL_5035 ACPOL_5043 SM00873 B3/4 domain ACPOL_5043 SM00874 tRNA synthetase B5 domain ACPOL_5043 SM00896 Ferredoxin-fold anticodon binding domain ACPOL_5062 SM00564 beta-propeller repeat ACPOL_5075 SM00028 Tetratricopeptide repeats ACPOL_5087 SM00028 Tetratricopeptide repeats ACPOL_5096 SM00855 Phosphoglycerate mutase family ACPOL_5097 SM00642 Alpha-amylase domain ACPOL_5111 SM00450 Rhodanese Homology Domain ACPOL_5121 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPOL_5121 SM01091 Transporter associated domain ACPOL_5142 SM00028 Tetratricopeptide repeats ACPOL_5150 SM00855 Phosphoglycerate mutase family ACPOL_5156 SM00327 von Willebrand factor (vWF) type A domain ACPOL_5159 SM00420 helix_turn_helix, Deoxyribose operon repressor ACPOL_5159 SM01134 ACPOL_5159 ACPOL_5162 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACPOL_5167 SM00822 ACPOL_5167 ACPOL_5167 SM01007 Class II Aldolase and Adducin N-terminal domain ACPOL_5171 SM00267 diguanylate cyclase ACPOL_5175 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPOL_5181 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_5181 SM00331 Sigma factor PP2C-like phosphatases ACPOL_5182 SM01133 ACPOL_5182 ACPOL_5210 SM00028 Tetratricopeptide repeats ACPOL_5210 SM00862 Transcriptional regulatory protein, C terminal ACPOL_5214 SM00331 Sigma factor PP2C-like phosphatases ACPOL_5215 SM00387 Histidine kinase-like ATPases ACPOL_5215 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_5215 SM00448 cheY-homologous receiver domain ACPOL_5216 SM00091 PAS domain ACPOL_5216 SM00387 Histidine kinase-like ATPases ACPOL_5216 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_5216 SM00448 cheY-homologous receiver domain ACPOL_5222 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_5222 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_5223 SM00829 Enoylreductase ACPOL_5228 SM00382 ATPases associated with a variety of cellular activities ACPOL_5233 SM00944 Pro-kumamolisin, activation domain ACPOL_5251 SM00028 Tetratricopeptide repeats ACPOL_5252 SM00798 AICARFT/IMPCHase bienzyme ACPOL_5252 SM00851 MGS-like domain ACPOL_5254 SM00487 DEAD-like helicases superfamily ACPOL_5254 SM00490 helicase superfamily c-terminal domain ACPOL_5264 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACPOL_5267 SM00382 ATPases associated with a variety of cellular activities ACPOL_5275 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_5280 SM00421 helix_turn_helix, Lux Regulon ACPOL_5280 SM00448 cheY-homologous receiver domain ACPOL_5281 SM00448 cheY-homologous receiver domain ACPOL_5282 SM00421 helix_turn_helix, Lux Regulon ACPOL_5282 SM00448 cheY-homologous receiver domain ACPOL_5283 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPOL_5283 SM00091 PAS domain ACPOL_5283 SM00387 Histidine kinase-like ATPases ACPOL_5283 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_5299 SM00829 Enoylreductase ACPOL_5303 SM00448 cheY-homologous receiver domain ACPOL_5304 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPOL_5304 SM00091 PAS domain ACPOL_5304 SM00387 Histidine kinase-like ATPases ACPOL_5304 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_5304 SM00448 cheY-homologous receiver domain ACPOL_5305 SM00421 helix_turn_helix, Lux Regulon ACPOL_5305 SM00448 cheY-homologous receiver domain ACPOL_5311 SM00382 ATPases associated with a variety of cellular activities ACPOL_5314 SM00331 Sigma factor PP2C-like phosphatases ACPOL_5314 SM00448 cheY-homologous receiver domain ACPOL_5315 SM00091 PAS domain ACPOL_5315 SM00387 Histidine kinase-like ATPases ACPOL_5315 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_5315 SM00448 cheY-homologous receiver domain ACPOL_5316 SM00331 Sigma factor PP2C-like phosphatases ACPOL_5316 SM00448 cheY-homologous receiver domain ACPOL_5326 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_5326 SM00387 Histidine kinase-like ATPases ACPOL_5326 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_5334 SM00387 Histidine kinase-like ATPases ACPOL_5335 SM00448 cheY-homologous receiver domain ACPOL_5336 SM00481 DNA polymerase alpha chain like domain ACPOL_5342 SM00861 Transketolase, pyrimidine binding domain ACPOL_5364 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_5368 SM00487 DEAD-like helicases superfamily ACPOL_5368 SM00490 helicase superfamily c-terminal domain ACPOL_5370 SM00822 ACPOL_5370 ACPOL_5373 SM00091 PAS domain ACPOL_5373 SM00138 Methyltransferase, chemotaxis proteins ACPOL_5373 SM00387 Histidine kinase-like ATPases ACPOL_5373 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_5373 SM00448 cheY-homologous receiver domain ACPOL_5375 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ACPOL_5378 SM00530 Helix-turn-helix XRE-family like proteins ACPOL_5381 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_5381 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_5382 SM00382 ATPases associated with a variety of cellular activities ACPOL_5384 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACPOL_5387 SM00812 Alpha-L-fucosidase ACPOL_5388 SM00420 helix_turn_helix, Deoxyribose operon repressor ACPOL_5388 SM01134 ACPOL_5388 ACPOL_5392 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain ACPOL_5410 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPOL_5415 SM01232 ACPOL_5415 ACPOL_5419 SM01149 ACPOL_5419 ACPOL_5423 SM00028 Tetratricopeptide repeats ACPOL_5431 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_5438 SM00448 cheY-homologous receiver domain ACPOL_5453 SM00028 Tetratricopeptide repeats ACPOL_5455 SM00382 ATPases associated with a variety of cellular activities ACPOL_5456 SM00448 cheY-homologous receiver domain ACPOL_5457 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACPOL_5457 SM00493 ACPOL_5457 ACPOL_5459 SM00382 ATPases associated with a variety of cellular activities ACPOL_5463 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain ACPOL_5468 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACPOL_5473 SM00857 Resolvase, N terminal domain ACPOL_5481 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_5490 SM00448 cheY-homologous receiver domain ACPOL_5490 SM00862 Transcriptional regulatory protein, C terminal ACPOL_5491 SM00387 Histidine kinase-like ATPases ACPOL_5491 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_5495 SM00244 prohibitin homologues ACPOL_5500 SM00944 Pro-kumamolisin, activation domain ACPOL_5502 SM00267 diguanylate cyclase ACPOL_5502 SM00448 cheY-homologous receiver domain ACPOL_5527 SM00028 Tetratricopeptide repeats ACPOL_5527 SM00862 Transcriptional regulatory protein, C terminal ACPOL_5529 SM01235 ACPOL_5529 ACPOL_5541 SM00245 tail specific protease ACPOL_5562 SM00327 von Willebrand factor (vWF) type A domain ACPOL_5566 SM00028 Tetratricopeptide repeats ACPOL_5566 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_5571 SM00382 ATPases associated with a variety of cellular activities ACPOL_5573 SM00382 ATPases associated with a variety of cellular activities ACPOL_5580 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACPOL_5581 SM00478 endonuclease III ACPOL_5587 SM00028 Tetratricopeptide repeats ACPOL_5592 SM00382 ATPases associated with a variety of cellular activities ACPOL_5596 SM00382 ATPases associated with a variety of cellular activities ACPOL_5604 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACPOL_5607 SM00878 Biotin carboxylase C-terminal domain ACPOL_5625 SM00382 ATPases associated with a variety of cellular activities ACPOL_5629 SM00883 Chaperonin 10 Kd subunit ACPOL_5637 SM01001 AIR carboxylase ACPOL_5649 SM00636 ACPOL_5649 ACPOL_5652 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_5652 SM00876 Biotin and Thiamin Synthesis associated domain ACPOL_5664 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_5668 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_5668 SM00091 PAS domain ACPOL_5668 SM00267 diguanylate cyclase ACPOL_5686 SM00903 Flavin reductase like domain ACPOL_5692 SM00642 Alpha-amylase domain ACPOL_5703 SM00028 Tetratricopeptide repeats ACPOL_5710 SM00829 Enoylreductase ACPOL_5726 SM00867 YceI-like domain ACPOL_5735 SM00028 Tetratricopeptide repeats ACPOL_5743 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_5744 SM00382 ATPases associated with a variety of cellular activities ACPOL_5747 SM00028 Tetratricopeptide repeats ACPOL_5754 SM00642 Alpha-amylase domain ACPOL_5766 SM00822 ACPOL_5766 ACPOL_5767 SM00822 ACPOL_5767 ACPOL_5768 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_5774 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPOL_5781 SM00448 cheY-homologous receiver domain ACPOL_5798 SM00478 endonuclease III ACPOL_5805 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ACPOL_5805 SM00534 ATPase domain of DNA mismatch repair MUTS family ACPOL_5809 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_5810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_5820 SM00947 Carbonic anhydrase ACPOL_5827 SM00382 ATPases associated with a variety of cellular activities ACPOL_5828 SM00382 ATPases associated with a variety of cellular activities ACPOL_5828 SM01086 C-terminal, D2-small domain, of ClpB protein ACPOL_5833 SM00563 Phosphate acyltransferases ACPOL_5840 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACPOL_5843 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ACPOL_5843 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACPOL_5855 SM01118 ACPOL_5855 ACPOL_5872 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACPOL_5873 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACPOL_5879 SM00890 Domain of unknown function ACPOL_5884 SM00028 Tetratricopeptide repeats ACPOL_5885 SM00028 Tetratricopeptide repeats ACPOL_5892 SM00836 DALR anticodon binding domain ACPOL_5895 SM00248 ankyrin repeats ACPOL_5897 SM00564 beta-propeller repeat ACPOL_5902 SM00944 Pro-kumamolisin, activation domain ACPOL_5916 SM00481 DNA polymerase alpha chain like domain ACPOL_5918 SM00487 DEAD-like helicases superfamily ACPOL_5918 SM00490 helicase superfamily c-terminal domain ACPOL_5919 SM00387 Histidine kinase-like ATPases ACPOL_5919 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_5929 SM00448 cheY-homologous receiver domain ACPOL_5929 SM00862 Transcriptional regulatory protein, C terminal ACPOL_5933 SM00829 Enoylreductase ACPOL_5934 SM00812 Alpha-L-fucosidase ACPOL_5935 SM00028 Tetratricopeptide repeats ACPOL_5936 SM00944 Pro-kumamolisin, activation domain ACPOL_5937 SM00382 ATPases associated with a variety of cellular activities ACPOL_5937 SM00464 Found in ATP-dependent protease La (LON) ACPOL_5952 SM00382 ATPases associated with a variety of cellular activities ACPOL_5960 SM01219 ACPOL_5960 ACPOL_5969 SM00354 helix_turn _helix lactose operon repressor ACPOL_5981 SM00448 cheY-homologous receiver domain ACPOL_5981 SM00862 Transcriptional regulatory protein, C terminal ACPOL_5982 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_5982 SM00387 Histidine kinase-like ATPases ACPOL_5982 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_5986 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPOL_5991 SM00028 Tetratricopeptide repeats ACPOL_5995 SM00823 Phosphopantetheine attachment site ACPOL_6017 SM00636 ACPOL_6017 ACPOL_6022 SM01329 ACPOL_6022 ACPOL_6029 SM00422 helix_turn_helix, mercury resistance ACPOL_6029 SM00871 Bacterial transcription activator, effector binding domain ACPOL_6035 SM00382 ATPases associated with a variety of cellular activities ACPOL_6042 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPOL_6064 SM00849 Metallo-beta-lactamase superfamily ACPOL_6073 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPOL_6084 SM00382 ATPases associated with a variety of cellular activities ACPOL_6096 SM00849 Metallo-beta-lactamase superfamily ACPOL_6137 SM00271 DnaJ molecular chaperone homology domain ACPOL_6152 SM00382 ATPases associated with a variety of cellular activities ACPOL_6202 SM00530 Helix-turn-helix XRE-family like proteins ACPOL_6240 SM00642 Alpha-amylase domain ACPOL_6258 SM00530 Helix-turn-helix XRE-family like proteins ACPOL_6277 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6278 SM00822 ACPOL_6278 ACPOL_6287 SM01329 ACPOL_6287 ACPOL_6289 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6303 SM00829 Enoylreductase ACPOL_6308 SM00448 cheY-homologous receiver domain ACPOL_6308 SM00862 Transcriptional regulatory protein, C terminal ACPOL_6323 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6324 SM00382 ATPases associated with a variety of cellular activities ACPOL_6328 SM00091 PAS domain ACPOL_6331 SM00028 Tetratricopeptide repeats ACPOL_6332 SM00245 tail specific protease ACPOL_6340 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6386 SM00450 Rhodanese Homology Domain ACPOL_6394 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACPOL_6395 SM01092 CO dehydrogenase flavoprotein C-terminal domain ACPOL_6406 SM00020 Trypsin-like serine protease ACPOL_6417 SM00829 Enoylreductase ACPOL_6434 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6435 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6437 SM00421 helix_turn_helix, Lux Regulon ACPOL_6437 SM00448 cheY-homologous receiver domain ACPOL_6441 SM00387 Histidine kinase-like ATPases ACPOL_6476 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6478 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6487 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6511 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_6511 SM00387 Histidine kinase-like ATPases ACPOL_6511 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_6512 SM00448 cheY-homologous receiver domain ACPOL_6512 SM00862 Transcriptional regulatory protein, C terminal ACPOL_6520 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6529 SM00885 D5 N terminal like ACPOL_6539 SM00382 ATPases associated with a variety of cellular activities ACPOL_6550 SM00822 ACPOL_6550 ACPOL_6556 SM00530 Helix-turn-helix XRE-family like proteins ACPOL_6560 SM00829 Enoylreductase ACPOL_6565 SM00028 Tetratricopeptide repeats ACPOL_6571 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6576 SM01092 CO dehydrogenase flavoprotein C-terminal domain ACPOL_6577 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACPOL_6595 SM00829 Enoylreductase ACPOL_6604 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6606 SM00530 Helix-turn-helix XRE-family like proteins ACPOL_6619 SM00947 Carbonic anhydrase ACPOL_6620 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6622 SM00421 helix_turn_helix, Lux Regulon ACPOL_6628 SM00354 helix_turn _helix lactose operon repressor ACPOL_6634 SM00812 Alpha-L-fucosidase ACPOL_6640 SM00028 Tetratricopeptide repeats ACPOL_6641 SM00812 Alpha-L-fucosidase ACPOL_6642 SM00637 ACPOL_6642 ACPOL_6645 SM00838 Elongation factor G C-terminus ACPOL_6664 SM01130 ACPOL_6664 ACPOL_6666 SM00851 MGS-like domain ACPOL_6666 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACPOL_6668 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ACPOL_6669 SM00327 von Willebrand factor (vWF) type A domain ACPOL_6680 SM00316 Ribosomal protein S1-like RNA-binding domain ACPOL_6680 SM00322 K homology RNA-binding domain ACPOL_6681 SM01387 ACPOL_6681 ACPOL_6709 SM00448 cheY-homologous receiver domain ACPOL_6709 SM00850 LytTr DNA-binding domain ACPOL_6714 SM00387 Histidine kinase-like ATPases ACPOL_6717 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPOL_6717 SM00387 Histidine kinase-like ATPases ACPOL_6717 SM00388 His Kinase A (phosphoacceptor) domain ACPOL_6718 SM00448 cheY-homologous receiver domain ACPOL_6718 SM00862 Transcriptional regulatory protein, C terminal ACPOL_6730 SM00369 Leucine-rich repeats, typical (most populated) subfamily ACPOL_6731 SM00365 Leucine-rich repeat, SDS22-like subfamily ACPOL_6744 SM00028 Tetratricopeptide repeats ACPOL_6794 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_6802 SM00387 Histidine kinase-like ATPases ACPOL_6813 SM00530 Helix-turn-helix XRE-family like proteins ACPOL_6815 SM00866 ACPOL_6815 ACPOL_6827 SM00155 Phospholipase D. Active site motifs. ACPOL_6828 SM00382 ATPases associated with a variety of cellular activities ACPOL_6831 SM00387 Histidine kinase-like ATPases ACPOL_6832 SM00421 helix_turn_helix, Lux Regulon ACPOL_6844 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_6844 SM00267 diguanylate cyclase ACPOL_6847 SM00448 cheY-homologous receiver domain ACPOL_6856 SM00564 beta-propeller repeat ACPOL_6861 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_6862 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_6862 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_6868 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_6874 SM00387 Histidine kinase-like ATPases ACPOL_6881 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_6881 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_6885 SM00267 diguanylate cyclase ACPOL_6899 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_6922 SM00857 Resolvase, N terminal domain ACPOL_6943 SM00862 Transcriptional regulatory protein, C terminal ACPOL_6956 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPOL_6956 SM00267 diguanylate cyclase ACPOL_6957 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_6957 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_6980 SM00267 diguanylate cyclase ACPOL_6992 SM00028 Tetratricopeptide repeats ACPOL_7026 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_7029 SM00829 Enoylreductase ACPOL_7030 SM00822 ACPOL_7030 ACPOL_7035 SM00220 Serine/Threonine protein kinases, catalytic domain ACPOL_7038 SM00862 Transcriptional regulatory protein, C terminal ACPOL_7048 SM00901 ACPOL_7048 ACPOL_7052 SM00857 Resolvase, N terminal domain ACPOL_7062 SM01149 ACPOL_7062 ACPOL_7063 SM00872 Alpha mannosidase, middle domain ACPOL_7070 SM00354 helix_turn _helix lactose operon repressor ACPOL_7083 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_7091 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_7092 SM01119 ACPOL_7092 ACPOL_7102 SM00100 Cyclic nucleotide-monophosphate binding domain ACPOL_7102 SM00419 helix_turn_helix, cAMP Regulatory protein ACPOL_7123 SM00448 cheY-homologous receiver domain ACPOL_7130 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_7135 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_7153 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_7158 SM00342 helix_turn_helix, arabinose operon control protein ACPOL_7176 SM00028 Tetratricopeptide repeats ACPOL_7176 SM01043 Bacterial transcriptional activator domain ACPOL_7180 SM00354 helix_turn _helix lactose operon repressor ACPOL_7190 SM00470 ParB-like nuclease domain ACPOL_7207 SM00421 helix_turn_helix, Lux Regulon ACPOL_7207 SM00448 cheY-homologous receiver domain ACPOL_7209 SM00387 Histidine kinase-like ATPases ACPOL_7240 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ACPOL_7240 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ACPOL_7240 SM00493 ACPOL_7240 ACPOL_7253 SM00382 ATPases associated with a variety of cellular activities ACPOL_7266 SM00857 Resolvase, N terminal domain