locus-tag class description Acav_0001 PF08299 Bacterial dnaA protein helix-turn-helix Acav_0001 PF11638 DnaA N-terminal domain Acav_0001 PF00308 Bacterial dnaA protein Acav_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Acav_0002 PF02767 DNA polymerase III beta subunit, central domain Acav_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Acav_0003 PF00986 DNA gyrase B subunit, carboxyl terminus Acav_0003 PF00204 DNA gyrase B Acav_0003 PF01751 Toprim domain Acav_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0003 PF18053 DNA gyrase B subunit insert domain Acav_0005 PF12161 HsdM N-terminal domain Acav_0005 PF02384 N-6 DNA Methylase Acav_0007 PF02384 N-6 DNA Methylase Acav_0008 PF01420 Type I restriction modification DNA specificity domain Acav_0010 PF18766 SWI2/SNF2 ATPase Acav_0010 PF11867 Domain of unknown function (DUF3387) Acav_0010 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Acav_0013 PF00158 Sigma-54 interaction domain Acav_0013 PF06956 Regulator of RNA terminal phosphate cyclase Acav_0015 PF01139 tRNA-splicing ligase RtcB Acav_0016 PF10127 RNA repair pathway DNA polymerase beta family Acav_0017 PF01137 RNA 3'-terminal phosphate cyclase Acav_0017 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain Acav_0019 PF02566 OsmC-like protein Acav_0021 PF00742 Homoserine dehydrogenase Acav_0021 PF03447 Homoserine dehydrogenase, NAD binding domain Acav_0021 PF01842 ACT domain Acav_0023 PF06733 DEAD_2 Acav_0023 PF13307 Helicase C-terminal domain Acav_0026 PF14480 DNA polymerase III polC-type N-terminus I Acav_0026 PF11490 DNA polymerase III polC-type N-terminus II Acav_0026 PF07733 Bacterial DNA polymerase III alpha NTPase domain Acav_0026 PF00929 Exonuclease Acav_0026 PF02811 PHP domain Acav_0026 PF14579 Helix-hairpin-helix motif Acav_0026 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Acav_0027 PF00392 Bacterial regulatory proteins, gntR family Acav_0027 PF00155 Aminotransferase class I and II Acav_0030 PF00682 HMGL-like Acav_0030 PF08502 LeuA allosteric (dimerisation) domain Acav_0031 PF00877 NlpC/P60 family Acav_0032 PF00793 DAHP synthetase I family Acav_0033 PF00563 EAL domain Acav_0033 PF00990 Diguanylate cyclase, GGDEF domain Acav_0033 PF03707 Bacterial signalling protein N terminal repeat Acav_0036 PF04381 Putative exonuclease, RdgC Acav_0037 PF07670 Nucleoside recognition Acav_0041 PF02803 Thiolase, C-terminal domain Acav_0041 PF00108 Thiolase, N-terminal domain Acav_0042 PF00376 MerR family regulatory protein Acav_0042 PF09278 MerR, DNA binding Acav_0044 PF00403 Heavy-metal-associated domain Acav_0045 PF00672 HAMP domain Acav_0045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0045 PF02203 Tar ligand binding domain homologue Acav_0048 PF00873 AcrB/AcrD/AcrF family Acav_0049 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Acav_0049 PF00529 HlyD membrane-fusion protein of T1SS Acav_0051 PF00486 Transcriptional regulatory protein, C terminal Acav_0051 PF00072 Response regulator receiver domain Acav_0052 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0052 PF00512 His Kinase A (phospho-acceptor) domain Acav_0054 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Acav_0055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Acav_0056 PF00005 ABC transporter Acav_0057 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0058 PF00043 Glutathione S-transferase, C-terminal domain Acav_0058 PF02798 Glutathione S-transferase, N-terminal domain Acav_0059 PF03692 Putative zinc- or iron-chelating domain Acav_0060 PF03358 NADPH-dependent FMN reductase Acav_0061 PF13932 GidA associated domain Acav_0061 PF01134 Glucose inhibited division protein A Acav_0062 PF02527 rRNA small subunit methyltransferase G Acav_0063 PF01810 LysE type translocator Acav_0064 PF13614 AAA domain Acav_0067 PF02195 ParB-like nuclease domain Acav_0067 PF17762 HTH domain found in ParB protein Acav_0068 PF00501 AMP-binding enzyme Acav_0068 PF13193 AMP-binding enzyme C-terminal domain Acav_0071 PF00378 Enoyl-CoA hydratase/isomerase Acav_0072 PF02785 Biotin carboxylase C-terminal domain Acav_0072 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Acav_0072 PF00364 Biotin-requiring enzyme Acav_0072 PF00289 Biotin carboxylase, N-terminal domain Acav_0073 PF01039 Carboxyl transferase domain Acav_0075 PF08608 Wyosine base formation Acav_0075 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain Acav_0076 PF12833 Helix-turn-helix domain Acav_0076 PF02311 AraC-like ligand binding domain Acav_0079 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_0079 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Acav_0082 PF00106 short chain dehydrogenase Acav_0083 PF04030 D-arabinono-1,4-lactone oxidase Acav_0083 PF01565 FAD binding domain Acav_0084 PF01040 UbiA prenyltransferase family Acav_0087 PF00135 Carboxylesterase family Acav_0088 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Acav_0089 PF01903 CbiX Acav_0090 PF02570 Precorrin-8X methylmutase Acav_0091 PF01888 CbiD Acav_0092 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Acav_0094 PF01890 Cobalamin synthesis G C-terminus Acav_0094 PF11760 Cobalamin synthesis G N-terminal Acav_0094 PF11761 Cobalamin biosynthesis central region Acav_0097 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Acav_0097 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Acav_0100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0100 PF03466 LysR substrate binding domain Acav_0102 PF03992 Antibiotic biosynthesis monooxygenase Acav_0110 PF03543 Yersinia/Haemophilus virulence surface antigen Acav_0121 PF02913 FAD linked oxidases, C-terminal domain Acav_0121 PF01565 FAD binding domain Acav_0124 PF01923 Cobalamin adenosyltransferase Acav_0129 PF03061 Thioesterase superfamily Acav_0130 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Acav_0130 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Acav_0132 PF00860 Permease family Acav_0134 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0134 PF00672 HAMP domain Acav_0134 PF02203 Tar ligand binding domain homologue Acav_0136 PF00990 Diguanylate cyclase, GGDEF domain Acav_0136 PF13185 GAF domain Acav_0137 PF00132 Bacterial transferase hexapeptide (six repeats) Acav_0139 PF01810 LysE type translocator Acav_0140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0140 PF03466 LysR substrate binding domain Acav_0141 PF00440 Bacterial regulatory proteins, tetR family Acav_0141 PF17754 MftR C-terminal domain Acav_0142 PF12706 Beta-lactamase superfamily domain Acav_0143 PF00005 ABC transporter Acav_0144 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0145 PF01494 FAD binding domain Acav_0146 PF03466 LysR substrate binding domain Acav_0146 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0148 PF00171 Aldehyde dehydrogenase family Acav_0149 PF01614 Bacterial transcriptional regulator Acav_0149 PF09339 IclR helix-turn-helix domain Acav_0150 PF01435 Peptidase family M48 Acav_0152 PF13193 AMP-binding enzyme C-terminal domain Acav_0152 PF00501 AMP-binding enzyme Acav_0153 PF00491 Arginase family Acav_0154 PF02423 Ornithine cyclodeaminase/mu-crystallin family Acav_0156 PF01066 CDP-alcohol phosphatidyltransferase Acav_0157 PF03775 Septum formation inhibitor MinC, C-terminal domain Acav_0157 PF05209 Septum formation inhibitor MinC, N-terminal domain Acav_0158 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Acav_0159 PF03776 Septum formation topological specificity factor MinE Acav_0160 PF01613 Flavin reductase like domain Acav_0161 PF00561 alpha/beta hydrolase fold Acav_0163 PF02525 Flavodoxin-like fold Acav_0164 PF01266 FAD dependent oxidoreductase Acav_0165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0165 PF03466 LysR substrate binding domain Acav_0166 PF00440 Bacterial regulatory proteins, tetR family Acav_0168 PF00582 Universal stress protein family Acav_0170 PF03466 LysR substrate binding domain Acav_0170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0172 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Acav_0172 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain Acav_0174 PF06508 Queuosine biosynthesis protein QueC Acav_0176 PF04349 Periplasmic glucan biosynthesis protein, MdoG Acav_0177 PF13291 ACT domain Acav_0177 PF00291 Pyridoxal-phosphate dependent enzyme Acav_0180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_0180 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_0180 PF18158 Adaptive response protein AidB N-terminal domain Acav_0181 PF03466 LysR substrate binding domain Acav_0181 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0182 PF07883 Cupin domain Acav_0183 PF01557 Fumarylacetoacetate (FAA) hydrolase family Acav_0184 PF13417 Glutathione S-transferase, N-terminal domain Acav_0185 PF07690 Major Facilitator Superfamily Acav_0187 PF02423 Ornithine cyclodeaminase/mu-crystallin family Acav_0191 PF03922 OmpW family Acav_0194 PF03466 LysR substrate binding domain Acav_0194 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0195 PF00970 Oxidoreductase FAD-binding domain Acav_0195 PF00111 2Fe-2S iron-sulfur cluster binding domain Acav_0195 PF00175 Oxidoreductase NAD-binding domain Acav_0196 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Acav_0196 PF00355 Rieske [2Fe-2S] domain Acav_0197 PF13577 SnoaL-like domain Acav_0198 PF00355 Rieske [2Fe-2S] domain Acav_0199 PF00672 HAMP domain Acav_0199 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0199 PF02203 Tar ligand binding domain homologue Acav_0204 PF02954 Bacterial regulatory protein, Fis family Acav_0204 PF00072 Response regulator receiver domain Acav_0204 PF00158 Sigma-54 interaction domain Acav_0205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0205 PF00512 His Kinase A (phospho-acceptor) domain Acav_0206 PF00809 Pterin binding enzyme Acav_0206 PF02310 B12 binding domain Acav_0206 PF02965 Vitamin B12 dependent methionine synthase, activation domain Acav_0206 PF02607 B12 binding domain Acav_0206 PF02574 Homocysteine S-methyltransferase Acav_0208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0208 PF03466 LysR substrate binding domain Acav_0209 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_0209 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_0209 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_0211 PF02515 CoA-transferase family III Acav_0212 PF03401 Tripartite tricarboxylate transporter family receptor Acav_0213 PF00570 HRDC domain Acav_0213 PF16124 RecQ zinc-binding Acav_0213 PF09382 RQC domain Acav_0213 PF00270 DEAD/DEAH box helicase Acav_0213 PF00271 Helicase conserved C-terminal domain Acav_0220 PF00440 Bacterial regulatory proteins, tetR family Acav_0224 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Acav_0224 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Acav_0226 PF03976 Polyphosphate kinase 2 (PPK2) Acav_0227 PF01425 Amidase Acav_0228 PF00593 TonB dependent receptor Acav_0228 PF07715 TonB-dependent Receptor Plug Domain Acav_0233 PF00072 Response regulator receiver domain Acav_0233 PF00990 Diguanylate cyclase, GGDEF domain Acav_0234 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0234 PF00512 His Kinase A (phospho-acceptor) domain Acav_0234 PF00672 HAMP domain Acav_0234 PF00072 Response regulator receiver domain Acav_0234 PF17149 Periplasmic sensor domain found in signal transduction proteins Acav_0234 PF01627 Hpt domain Acav_0236 PF02653 Branched-chain amino acid transport system / permease component Acav_0236 PF11862 Domain of unknown function (DUF3382) Acav_0238 PF12399 Branched-chain amino acid ATP-binding cassette transporter Acav_0238 PF00005 ABC transporter Acav_0239 PF00005 ABC transporter Acav_0240 PF03069 Acetamidase/Formamidase family Acav_0242 PF00795 Carbon-nitrogen hydrolase Acav_0244 PF03466 LysR substrate binding domain Acav_0244 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0245 PF13378 Enolase C-terminal domain-like Acav_0245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Acav_0249 PF00155 Aminotransferase class I and II Acav_0249 PF00392 Bacterial regulatory proteins, gntR family Acav_0250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0250 PF03466 LysR substrate binding domain Acav_0251 PF07690 Major Facilitator Superfamily Acav_0255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0255 PF03466 LysR substrate binding domain Acav_0256 PF00497 Bacterial extracellular solute-binding proteins, family 3 Acav_0259 PF04115 Ureidoglycolate lyase Acav_0260 PF00005 ABC transporter Acav_0261 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0262 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0264 PF07729 FCD domain Acav_0264 PF00392 Bacterial regulatory proteins, gntR family Acav_0266 PF02574 Homocysteine S-methyltransferase Acav_0266 PF00809 Pterin binding enzyme Acav_0266 PF02310 B12 binding domain Acav_0266 PF02607 B12 binding domain Acav_0266 PF02965 Vitamin B12 dependent methionine synthase, activation domain Acav_0267 PF18070 CRISPR-Cas9 PI domain Acav_0267 PF18061 CRISPR-Cas9 WED domain Acav_0267 PF18541 RuvC endonuclease subdomain 3 Acav_0267 PF13395 HNH endonuclease Acav_0267 PF18470 Cas9 alpha-helical lobe domain Acav_0269 PF09827 CRISPR associated protein Cas2 Acav_0273 PF04185 Phosphoesterase family Acav_0273 PF05506 Domain of unknown function (DUF756) Acav_0274 PF00563 EAL domain Acav_0274 PF00990 Diguanylate cyclase, GGDEF domain Acav_0274 PF03707 Bacterial signalling protein N terminal repeat Acav_0278 PF00970 Oxidoreductase FAD-binding domain Acav_0278 PF00175 Oxidoreductase NAD-binding domain Acav_0279 PF03466 LysR substrate binding domain Acav_0279 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0282 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0282 PF02203 Tar ligand binding domain homologue Acav_0282 PF00672 HAMP domain Acav_0283 PF03401 Tripartite tricarboxylate transporter family receptor Acav_0284 PF00512 His Kinase A (phospho-acceptor) domain Acav_0284 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0285 PF02954 Bacterial regulatory protein, Fis family Acav_0285 PF00158 Sigma-54 interaction domain Acav_0285 PF00072 Response regulator receiver domain Acav_0286 PF13335 Magnesium chelatase, subunit ChlI C-terminal Acav_0286 PF01078 Magnesium chelatase, subunit ChlI Acav_0288 PF00543 Nitrogen regulatory protein P-II Acav_0289 PF00909 Ammonium Transporter Family Acav_0290 PF08450 SMP-30/Gluconolactonase/LRE-like region Acav_0298 PF04717 Type VI secretion system, phage-baseplate injector Acav_0299 PF01565 FAD binding domain Acav_0301 PF02754 Cysteine-rich domain Acav_0301 PF13183 4Fe-4S dicluster domain Acav_0307 PF00255 Glutathione peroxidase Acav_0309 PF07690 Major Facilitator Superfamily Acav_0310 PF01168 Alanine racemase, N-terminal domain Acav_0310 PF00842 Alanine racemase, C-terminal domain Acav_0312 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Acav_0314 PF03401 Tripartite tricarboxylate transporter family receptor Acav_0316 PF02798 Glutathione S-transferase, N-terminal domain Acav_0316 PF00043 Glutathione S-transferase, C-terminal domain Acav_0317 PF02558 Ketopantoate reductase PanE/ApbA Acav_0317 PF08546 Ketopantoate reductase PanE/ApbA C terminal Acav_0319 PF18073 Rubredoxin metal binding domain Acav_0321 PF01063 Amino-transferase class IV Acav_0326 PF00535 Glycosyl transferase family 2 Acav_0328 PF03060 Nitronate monooxygenase Acav_0329 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0329 PF03466 LysR substrate binding domain Acav_0330 PF06779 Uncharacterised MFS-type transporter YbfB Acav_0331 PF00672 HAMP domain Acav_0331 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0331 PF00512 His Kinase A (phospho-acceptor) domain Acav_0332 PF00072 Response regulator receiver domain Acav_0332 PF00486 Transcriptional regulatory protein, C terminal Acav_0333 PF07690 Major Facilitator Superfamily Acav_0336 PF01435 Peptidase family M48 Acav_0337 PF00939 Sodium:sulfate symporter transmembrane region Acav_0338 PF00753 Metallo-beta-lactamase superfamily Acav_0339 PF01546 Peptidase family M20/M25/M40 Acav_0339 PF07687 Peptidase dimerisation domain Acav_0341 PF13185 GAF domain Acav_0341 PF00990 Diguanylate cyclase, GGDEF domain Acav_0343 PF03466 LysR substrate binding domain Acav_0343 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0344 PF07690 Major Facilitator Superfamily Acav_0345 PF00248 Aldo/keto reductase family Acav_0346 PF03372 Endonuclease/Exonuclease/phosphatase family Acav_0347 PF00156 Phosphoribosyl transferase domain Acav_0349 PF02637 GatB domain Acav_0349 PF02934 GatB/GatE catalytic domain Acav_0352 PF01425 Amidase Acav_0353 PF02686 Glu-tRNAGln amidotransferase C subunit Acav_0356 PF04093 rod shape-determining protein MreD Acav_0357 PF03717 Penicillin-binding Protein dimerisation domain Acav_0357 PF00905 Penicillin binding protein transpeptidase domain Acav_0359 PF00005 ABC transporter Acav_0360 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0361 PF00497 Bacterial extracellular solute-binding proteins, family 3 Acav_0362 PF03313 Serine dehydratase alpha chain Acav_0362 PF03315 Serine dehydratase beta chain Acav_0363 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0363 PF03466 LysR substrate binding domain Acav_0364 PF01925 Sulfite exporter TauE/SafE Acav_0365 PF00732 GMC oxidoreductase Acav_0365 PF05199 GMC oxidoreductase Acav_0366 PF02405 Permease MlaE Acav_0367 PF00005 ABC transporter Acav_0375 PF07715 TonB-dependent Receptor Plug Domain Acav_0375 PF00593 TonB dependent receptor Acav_0378 PF01507 Phosphoadenosine phosphosulfate reductase family Acav_0379 PF05532 CsbD-like Acav_0383 PF06123 Inner membrane protein CreD Acav_0384 PF00672 HAMP domain Acav_0384 PF00512 His Kinase A (phospho-acceptor) domain Acav_0384 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0385 PF00486 Transcriptional regulatory protein, C terminal Acav_0385 PF00072 Response regulator receiver domain Acav_0386 PF01914 MarC family integral membrane protein Acav_0388 PF01738 Dienelactone hydrolase family Acav_0389 PF07690 Major Facilitator Superfamily Acav_0390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Acav_0390 PF00529 HlyD membrane-fusion protein of T1SS Acav_0391 PF02321 Outer membrane efflux protein Acav_0393 PF02540 NAD synthase Acav_0393 PF00958 GMP synthase C terminal domain Acav_0393 PF00117 Glutamine amidotransferase class-I Acav_0394 PF01544 CorA-like Mg2+ transporter protein Acav_0395 PF00490 Delta-aminolevulinic acid dehydratase Acav_0399 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Acav_0400 PF07943 Penicillin-binding protein 5, C-terminal domain Acav_0400 PF00768 D-alanyl-D-alanine carboxypeptidase Acav_0401 PF00164 Ribosomal protein S12/S23 Acav_0402 PF00177 Ribosomal protein S7p/S5e Acav_0403 PF03144 Elongation factor Tu domain 2 Acav_0403 PF14492 Elongation Factor G, domain II Acav_0403 PF03764 Elongation factor G, domain IV Acav_0403 PF00009 Elongation factor Tu GTP binding domain Acav_0403 PF00679 Elongation factor G C-terminus Acav_0404 PF00009 Elongation factor Tu GTP binding domain Acav_0404 PF03143 Elongation factor Tu C-terminal domain Acav_0404 PF03144 Elongation factor Tu domain 2 Acav_0405 PF00338 Ribosomal protein S10p/S20e Acav_0406 PF00297 Ribosomal protein L3 Acav_0407 PF00573 Ribosomal protein L4/L1 family Acav_0408 PF00276 Ribosomal protein L23 Acav_0409 PF03947 Ribosomal Proteins L2, C-terminal domain Acav_0409 PF00181 Ribosomal Proteins L2, RNA binding domain Acav_0410 PF00203 Ribosomal protein S19 Acav_0411 PF00237 Ribosomal protein L22p/L17e Acav_0412 PF07650 KH domain Acav_0412 PF00189 Ribosomal protein S3, C-terminal domain Acav_0413 PF00252 Ribosomal protein L16p/L10e Acav_0414 PF00831 Ribosomal L29 protein Acav_0415 PF00366 Ribosomal protein S17 Acav_0416 PF08534 Redoxin Acav_0418 PF00578 AhpC/TSA family Acav_0421 PF00381 PTS HPr component phosphorylation site Acav_0422 PF02896 PEP-utilising enzyme, TIM barrel domain Acav_0422 PF00391 PEP-utilising enzyme, mobile domain Acav_0422 PF05524 PEP-utilising enzyme, N-terminal Acav_0425 PF03814 Potassium-transporting ATPase A subunit Acav_0427 PF02669 K+-transporting ATPase, c chain Acav_0428 PF00512 His Kinase A (phospho-acceptor) domain Acav_0428 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0428 PF13492 GAF domain Acav_0428 PF13493 Domain of unknown function (DUF4118) Acav_0428 PF02702 Osmosensitive K+ channel His kinase sensor domain Acav_0429 PF00486 Transcriptional regulatory protein, C terminal Acav_0429 PF00072 Response regulator receiver domain Acav_0432 PF04055 Radical SAM superfamily Acav_0432 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Acav_0433 PF03099 Biotin/lipoate A/B protein ligase family Acav_0434 PF04359 Protein of unknown function (DUF493) Acav_0436 PF00119 ATP synthase A chain Acav_0437 PF00137 ATP synthase subunit C Acav_0438 PF00430 ATP synthase B/B' CF(0) Acav_0439 PF00213 ATP synthase delta (OSCP) subunit Acav_0440 PF00306 ATP synthase alpha/beta chain, C terminal domain Acav_0440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Acav_0440 PF02874 ATP synthase alpha/beta family, beta-barrel domain Acav_0441 PF00231 ATP synthase Acav_0442 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Acav_0442 PF02874 ATP synthase alpha/beta family, beta-barrel domain Acav_0443 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Acav_0444 PF01068 ATP dependent DNA ligase domain Acav_0444 PF04675 DNA ligase N terminus Acav_0444 PF04679 ATP dependent DNA ligase C terminal region Acav_0445 PF04675 DNA ligase N terminus Acav_0445 PF04679 ATP dependent DNA ligase C terminal region Acav_0445 PF01068 ATP dependent DNA ligase domain Acav_0446 PF00270 DEAD/DEAH box helicase Acav_0446 PF08494 DEAD/H associated Acav_0446 PF00271 Helicase conserved C-terminal domain Acav_0456 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Acav_0458 PF02321 Outer membrane efflux protein Acav_0459 PF00873 AcrB/AcrD/AcrF family Acav_0460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Acav_0460 PF00529 HlyD membrane-fusion protein of T1SS Acav_0461 PF08361 MAATS-type transcriptional repressor, C-terminal region Acav_0461 PF00440 Bacterial regulatory proteins, tetR family Acav_0464 PF13230 Glutamine amidotransferases class-II Acav_0465 PF07690 Major Facilitator Superfamily Acav_0466 PF01361 Tautomerase enzyme Acav_0468 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0468 PF02203 Tar ligand binding domain homologue Acav_0468 PF00672 HAMP domain Acav_0469 PF01274 Malate synthase Acav_0470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0470 PF03466 LysR substrate binding domain Acav_0472 PF01011 PQQ enzyme repeat Acav_0475 PF00750 tRNA synthetases class I (R) Acav_0475 PF05746 DALR anticodon binding domain Acav_0475 PF03485 Arginyl tRNA synthetase N terminal domain Acav_0477 PF01323 DSBA-like thioredoxin domain Acav_0477 PF00085 Thioredoxin Acav_0479 PF00005 ABC transporter Acav_0480 PF00309 Sigma-54 factor, Activator interacting domain (AID) Acav_0480 PF04963 Sigma-54 factor, core binding domain Acav_0480 PF04552 Sigma-54, DNA binding domain Acav_0481 PF03073 TspO/MBR family Acav_0482 PF02743 Cache domain Acav_0482 PF00672 HAMP domain Acav_0482 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0483 PF02743 Cache domain Acav_0483 PF00672 HAMP domain Acav_0483 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0484 PF01170 Putative RNA methylase family UPF0020 Acav_0484 PF02926 THUMP domain Acav_0486 PF00005 ABC transporter Acav_0486 PF06472 ABC transporter transmembrane region 2 Acav_0488 PF02810 SEC-C motif Acav_0488 PF03695 Uncharacterised protein family (UPF0149) Acav_0489 PF01740 STAS domain Acav_0489 PF00916 Sulfate permease family Acav_0490 PF00672 HAMP domain Acav_0490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0490 PF02203 Tar ligand binding domain homologue Acav_0491 PF02464 Competence-damaged protein Acav_0492 PF04608 Phosphatidylglycerophosphatase A Acav_0494 PF02769 AIR synthase related protein, C-terminal domain Acav_0494 PF00586 AIR synthase related protein, N-terminal domain Acav_0496 PF00691 OmpA family Acav_0496 PF04972 BON domain Acav_0497 PF03401 Tripartite tricarboxylate transporter family receptor Acav_0498 PF01070 FMN-dependent dehydrogenase Acav_0500 PF04107 Glutamate-cysteine ligase family 2(GCS2) Acav_0503 PF04379 ApaG domain Acav_0504 PF00834 Ribulose-phosphate 3 epimerase family Acav_0506 PF13419 Haloacid dehalogenase-like hydrolase Acav_0508 PF00425 chorismate binding enzyme Acav_0508 PF04715 Anthranilate synthase component I, N terminal region Acav_0510 PF12833 Helix-turn-helix domain Acav_0514 PF01313 Bacterial export proteins, family 3 Acav_0515 PF00813 FliP family Acav_0518 PF00771 FHIPEP family Acav_0519 PF01312 FlhB HrpN YscU SpaS Family Acav_0524 PF03211 Pectate lyase Acav_0530 PF18269 T3SS EscN ATPase C-terminal domain Acav_0530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Acav_0530 PF02874 ATP synthase alpha/beta family, beta-barrel domain Acav_0533 PF01514 Secretory protein of YscJ/FliF family Acav_0544 PF13847 Methyltransferase domain Acav_0544 PF10119 Predicted methyltransferase regulatory domain Acav_0545 PF01551 Peptidase family M23 Acav_0545 PF10145 Phage-related minor tail protein Acav_0545 PF01464 Transglycosylase SLT domain Acav_0550 PF00117 Glutamine amidotransferase class-I Acav_0552 PF01810 LysE type translocator Acav_0553 PF00591 Glycosyl transferase family, a/b domain Acav_0553 PF02885 Glycosyl transferase family, helical bundle domain Acav_0555 PF00218 Indole-3-glycerol phosphate synthase Acav_0556 PF03167 Uracil DNA glycosylase superfamily Acav_0559 PF02547 Queuosine biosynthesis protein Acav_0562 PF01557 Fumarylacetoacetate (FAA) hydrolase family Acav_0564 PF01966 HD domain Acav_0564 PF11871 Domain of unknown function (DUF3391) Acav_0565 PF00271 Helicase conserved C-terminal domain Acav_0565 PF17191 RecG wedge domain Acav_0565 PF00270 DEAD/DEAH box helicase Acav_0566 PF03466 LysR substrate binding domain Acav_0566 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0567 PF00210 Ferritin-like domain Acav_0568 PF01040 UbiA prenyltransferase family Acav_0572 PF14748 Pyrroline-5-carboxylate reductase dimerisation Acav_0572 PF03807 NADP oxidoreductase coenzyme F420-dependent Acav_0573 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Acav_0573 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Acav_0574 PF00455 DeoR C terminal sensor domain Acav_0574 PF08220 DeoR-like helix-turn-helix domain Acav_0575 PF17912 MalK OB fold domain Acav_0575 PF00005 ABC transporter Acav_0576 PF08402 TOBE domain Acav_0576 PF00005 ABC transporter Acav_0577 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0578 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0581 PF01266 FAD dependent oxidoreductase Acav_0581 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Acav_0582 PF00238 Ribosomal protein L14p/L23e Acav_0583 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Acav_0584 PF00281 Ribosomal protein L5 Acav_0584 PF00673 ribosomal L5P family C-terminus Acav_0585 PF00253 Ribosomal protein S14p/S29e Acav_0586 PF00410 Ribosomal protein S8 Acav_0587 PF00347 Ribosomal protein L6 Acav_0588 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Acav_0589 PF00333 Ribosomal protein S5, N-terminal domain Acav_0589 PF03719 Ribosomal protein S5, C-terminal domain Acav_0590 PF00327 Ribosomal protein L30p/L7e Acav_0591 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Acav_0592 PF00344 SecY translocase Acav_0593 PF00444 Ribosomal protein L36 Acav_0594 PF00416 Ribosomal protein S13/S18 Acav_0595 PF00411 Ribosomal protein S11 Acav_0596 PF00163 Ribosomal protein S4/S9 N-terminal domain Acav_0596 PF01479 S4 domain Acav_0597 PF01000 RNA polymerase Rpb3/RpoA insert domain Acav_0597 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Acav_0597 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Acav_0598 PF01196 Ribosomal protein L17 Acav_0599 PF00012 Hsp70 protein Acav_0600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Acav_0601 PF02021 Uncharacterised protein family UPF0102 Acav_0602 PF13580 SIS domain Acav_0603 PF04972 BON domain Acav_0604 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Acav_0604 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Acav_0605 PF00437 Type II/IV secretion system protein Acav_0606 PF13545 Crp-like helix-turn-helix domain Acav_0606 PF00027 Cyclic nucleotide-binding domain Acav_0607 PF00437 Type II/IV secretion system protein Acav_0608 PF01168 Alanine racemase, N-terminal domain Acav_0609 PF01212 Beta-eliminating lyase Acav_0611 PF04286 Protein of unknown function (DUF445) Acav_0615 PF02913 FAD linked oxidases, C-terminal domain Acav_0615 PF01565 FAD binding domain Acav_0617 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0617 PF03466 LysR substrate binding domain Acav_0618 PF00551 Formyl transferase Acav_0619 PF03707 Bacterial signalling protein N terminal repeat Acav_0619 PF00563 EAL domain Acav_0619 PF00990 Diguanylate cyclase, GGDEF domain Acav_0622 PF02308 MgtC family Acav_0624 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Acav_0624 PF00672 HAMP domain Acav_0624 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0624 PF07730 Histidine kinase Acav_0625 PF00196 Bacterial regulatory proteins, luxR family Acav_0625 PF00072 Response regulator receiver domain Acav_0626 PF09572 XamI restriction endonuclease Acav_0627 PF02384 N-6 DNA Methylase Acav_0628 PF07690 Major Facilitator Superfamily Acav_0629 PF07690 Major Facilitator Superfamily Acav_0630 PF01568 Molydopterin dinucleotide binding domain Acav_0630 PF14710 Respiratory nitrate reductase alpha N-terminal Acav_0630 PF00384 Molybdopterin oxidoreductase Acav_0631 PF14711 Respiratory nitrate reductase beta C-terminal Acav_0631 PF13247 4Fe-4S dicluster domain Acav_0632 PF02613 Nitrate reductase delta subunit Acav_0633 PF02665 Nitrate reductase gamma subunit Acav_0634 PF00639 PPIC-type PPIASE domain Acav_0634 PF09312 SurA N-terminal domain Acav_0635 PF00484 Carbonic anhydrase Acav_0636 PF00317 Ribonucleotide reductase, all-alpha domain Acav_0636 PF03477 ATP cone domain Acav_0636 PF02867 Ribonucleotide reductase, barrel domain Acav_0639 PF01814 Hemerythrin HHE cation binding domain Acav_0641 PF07690 Major Facilitator Superfamily Acav_0647 PF03401 Tripartite tricarboxylate transporter family receptor Acav_0648 PF03466 LysR substrate binding domain Acav_0648 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0656 PF03006 Haemolysin-III related Acav_0662 PF04717 Type VI secretion system, phage-baseplate injector Acav_0670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Acav_0671 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Acav_0673 PF00920 Dehydratase family Acav_0674 PF03480 Bacterial extracellular solute-binding protein, family 7 Acav_0675 PF03466 LysR substrate binding domain Acav_0675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0676 PF03466 LysR substrate binding domain Acav_0676 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_0677 PF02678 Pirin Acav_0677 PF17954 Quercetinase C-terminal cupin domain Acav_0678 PF00857 Isochorismatase family Acav_0679 PF07969 Amidohydrolase family Acav_0681 PF07690 Major Facilitator Superfamily Acav_0683 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Acav_0683 PF00384 Molybdopterin oxidoreductase Acav_0683 PF01568 Molydopterin dinucleotide binding domain Acav_0685 PF07687 Peptidase dimerisation domain Acav_0685 PF01546 Peptidase family M20/M25/M40 Acav_0686 PF01546 Peptidase family M20/M25/M40 Acav_0686 PF07687 Peptidase dimerisation domain Acav_0688 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0691 PF13302 Acetyltransferase (GNAT) domain Acav_0691 PF00958 GMP synthase C terminal domain Acav_0691 PF00117 Glutamine amidotransferase class-I Acav_0691 PF13673 Acetyltransferase (GNAT) domain Acav_0691 PF03352 Methyladenine glycosylase Acav_0695 PF03401 Tripartite tricarboxylate transporter family receptor Acav_0696 PF03401 Tripartite tricarboxylate transporter family receptor Acav_0697 PF14535 AMP-binding enzyme C-terminal domain Acav_0697 PF00501 AMP-binding enzyme Acav_0698 PF00005 ABC transporter Acav_0700 PF02653 Branched-chain amino acid transport system / permease component Acav_0700 PF11862 Domain of unknown function (DUF3382) Acav_0701 PF02653 Branched-chain amino acid transport system / permease component Acav_0702 PF00005 ABC transporter Acav_0702 PF12399 Branched-chain amino acid ATP-binding cassette transporter Acav_0703 PF00501 AMP-binding enzyme Acav_0704 PF13401 AAA domain Acav_0704 PF01471 Putative peptidoglycan binding domain Acav_0705 PF16537 Type II secretion system protein B Acav_0718 PF05987 Bacterial protein of unknown function (DUF898) Acav_0719 PF01479 S4 domain Acav_0719 PF00849 RNA pseudouridylate synthase Acav_0721 PF01494 FAD binding domain Acav_0725 PF01638 HxlR-like helix-turn-helix Acav_0726 PF02525 Flavodoxin-like fold Acav_0729 PF02798 Glutathione S-transferase, N-terminal domain Acav_0730 PF01678 Diaminopimelate epimerase Acav_0732 PF00589 Phage integrase family Acav_0732 PF02899 Phage integrase, N-terminal SAM-like domain Acav_0734 PF00672 HAMP domain Acav_0734 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0734 PF12729 Four helix bundle sensory module for signal transduction Acav_0736 PF17785 PUA-like domain Acav_0736 PF10672 S-adenosylmethionine-dependent methyltransferase Acav_0737 PF13426 PAS domain Acav_0737 PF00563 EAL domain Acav_0737 PF08447 PAS fold Acav_0737 PF08448 PAS fold Acav_0737 PF05231 MASE1 Acav_0737 PF00990 Diguanylate cyclase, GGDEF domain Acav_0738 PF07683 Cobalamin synthesis protein cobW C-terminal domain Acav_0738 PF02492 CobW/HypB/UreG, nucleotide-binding domain Acav_0739 PF01258 Prokaryotic dksA/traR C4-type zinc finger Acav_0741 PF00227 Proteasome subunit Acav_0742 PF07724 AAA domain (Cdc48 subfamily) Acav_0742 PF00004 ATPase family associated with various cellular activities (AAA) Acav_0743 PF02381 MraZ protein, putative antitoxin-like Acav_0744 PF01795 MraW methylase family Acav_0746 PF03717 Penicillin-binding Protein dimerisation domain Acav_0746 PF00905 Penicillin binding protein transpeptidase domain Acav_0747 PF02875 Mur ligase family, glutamate ligase domain Acav_0747 PF08245 Mur ligase middle domain Acav_0748 PF02875 Mur ligase family, glutamate ligase domain Acav_0748 PF01225 Mur ligase family, catalytic domain Acav_0748 PF08245 Mur ligase middle domain Acav_0749 PF00953 Glycosyl transferase family 4 Acav_0749 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Acav_0750 PF08245 Mur ligase middle domain Acav_0750 PF02875 Mur ligase family, glutamate ligase domain Acav_0751 PF01098 Cell cycle protein Acav_0752 PF04101 Glycosyltransferase family 28 C-terminal domain Acav_0752 PF03033 Glycosyltransferase family 28 N-terminal domain Acav_0753 PF01225 Mur ligase family, catalytic domain Acav_0753 PF02875 Mur ligase family, glutamate ligase domain Acav_0753 PF08245 Mur ligase middle domain Acav_0754 PF01820 D-ala D-ala ligase N-terminus Acav_0754 PF07478 D-ala D-ala ligase C-terminus Acav_0755 PF08478 POTRA domain, FtsQ-type Acav_0755 PF03799 Cell division protein FtsQ Acav_0756 PF02491 SHS2 domain inserted in FTSA Acav_0757 PF00091 Tubulin/FtsZ family, GTPase domain Acav_0757 PF12327 FtsZ family, C-terminal domain Acav_0758 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Acav_0760 PF01964 Radical SAM ThiC family Acav_0760 PF13667 ThiC-associated domain Acav_0761 PF16591 Helical bimodular sensor domain Acav_0761 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0761 PF00672 HAMP domain Acav_0762 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0764 PF02075 Crossover junction endodeoxyribonuclease RuvC Acav_0767 PF03401 Tripartite tricarboxylate transporter family receptor Acav_0769 PF03328 HpcH/HpaI aldolase/citrate lyase family Acav_0771 PF01614 Bacterial transcriptional regulator Acav_0771 PF09339 IclR helix-turn-helix domain Acav_0772 PF00912 Transglycosylase Acav_0773 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Acav_0773 PF08501 Shikimate dehydrogenase substrate binding domain Acav_0773 PF01488 Shikimate / quinate 5-dehydrogenase Acav_0775 PF00773 RNB domain Acav_0777 PF05728 Uncharacterised protein family (UPF0227) Acav_0778 PF01098 Cell cycle protein Acav_0779 PF01425 Amidase Acav_0780 PF01523 Putative modulator of DNA gyrase Acav_0783 PF00793 DAHP synthetase I family Acav_0785 PF08245 Mur ligase middle domain Acav_0785 PF02875 Mur ligase family, glutamate ligase domain Acav_0785 PF01225 Mur ligase family, catalytic domain Acav_0787 PF08534 Redoxin Acav_0788 PF00364 Biotin-requiring enzyme Acav_0790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Acav_0790 PF00289 Biotin carboxylase, N-terminal domain Acav_0790 PF02785 Biotin carboxylase C-terminal domain Acav_0793 PF00294 pfkB family carbohydrate kinase Acav_0795 PF00268 Ribonucleotide reductase, small chain Acav_0796 PF00317 Ribonucleotide reductase, all-alpha domain Acav_0796 PF02867 Ribonucleotide reductase, barrel domain Acav_0796 PF03477 ATP cone domain Acav_0797 PF01510 N-acetylmuramoyl-L-alanine amidase Acav_0798 PF00158 Sigma-54 interaction domain Acav_0798 PF00072 Response regulator receiver domain Acav_0798 PF02954 Bacterial regulatory protein, Fis family Acav_0799 PF00512 His Kinase A (phospho-acceptor) domain Acav_0799 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0802 PF02978 Signal peptide binding domain Acav_0802 PF02881 SRP54-type protein, helical bundle domain Acav_0802 PF00448 SRP54-type protein, GTPase domain Acav_0803 PF00535 Glycosyl transferase family 2 Acav_0804 PF00158 Sigma-54 interaction domain Acav_0804 PF00072 Response regulator receiver domain Acav_0806 PF00512 His Kinase A (phospho-acceptor) domain Acav_0806 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0807 PF01938 TRAM domain Acav_0807 PF00919 Uncharacterized protein family UPF0004 Acav_0807 PF04055 Radical SAM superfamily Acav_0809 PF13673 Acetyltransferase (GNAT) domain Acav_0812 PF00593 TonB dependent receptor Acav_0812 PF07715 TonB-dependent Receptor Plug Domain Acav_0814 PF04542 Sigma-70 region 2 Acav_0814 PF08281 Sigma-70, region 4 Acav_0815 PF00072 Response regulator receiver domain Acav_0815 PF00486 Transcriptional regulatory protein, C terminal Acav_0816 PF00512 His Kinase A (phospho-acceptor) domain Acav_0816 PF08521 Two-component sensor kinase N-terminal Acav_0816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0818 PF00873 AcrB/AcrD/AcrF family Acav_0819 PF02321 Outer membrane efflux protein Acav_0821 PF00005 ABC transporter Acav_0822 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Acav_0822 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_0822 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_0824 PF02653 Branched-chain amino acid transport system / permease component Acav_0825 PF02653 Branched-chain amino acid transport system / permease component Acav_0826 PF00005 ABC transporter Acav_0826 PF12399 Branched-chain amino acid ATP-binding cassette transporter Acav_0827 PF00296 Luciferase-like monooxygenase Acav_0828 PF03358 NADPH-dependent FMN reductase Acav_0829 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Acav_0829 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_0830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_0830 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Acav_0831 PF00158 Sigma-54 interaction domain Acav_0832 PF00378 Enoyl-CoA hydratase/isomerase Acav_0834 PF13098 Thioredoxin-like domain Acav_0834 PF10411 Disulfide bond isomerase protein N-terminus Acav_0835 PF01494 FAD binding domain Acav_0837 PF01926 50S ribosome-binding GTPase Acav_0837 PF06071 Protein of unknown function (DUF933) Acav_0839 PF00005 ABC transporter Acav_0839 PF00571 CBS domain Acav_0840 PF00892 EamA-like transporter family Acav_0841 PF09335 SNARE associated Golgi protein Acav_0842 PF08448 PAS fold Acav_0842 PF00990 Diguanylate cyclase, GGDEF domain Acav_0843 PF01207 Dihydrouridine synthase (Dus) Acav_0844 PF02954 Bacterial regulatory protein, Fis family Acav_0845 PF02142 MGS-like domain Acav_0845 PF01808 AICARFT/IMPCHase bienzyme Acav_0847 PF00202 Aminotransferase class-III Acav_0848 PF02581 Thiamine monophosphate synthase Acav_0848 PF03070 TENA/THI-4/PQQC family Acav_0848 PF08543 Phosphomethylpyrimidine kinase Acav_0849 PF00301 Rubredoxin Acav_0850 PF00072 Response regulator receiver domain Acav_0851 PF00072 Response regulator receiver domain Acav_0852 PF01584 CheW-like domain Acav_0853 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0853 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Acav_0854 PF01584 CheW-like domain Acav_0854 PF01627 Hpt domain Acav_0854 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_0854 PF02895 Signal transducing histidine kinase, homodimeric domain Acav_0854 PF09078 CheY binding Acav_0855 PF00875 DNA photolyase Acav_0855 PF03441 FAD binding domain of DNA photolyase Acav_0856 PF02622 Uncharacterized ACR, COG1678 Acav_0857 PF03652 Holliday junction resolvase Acav_0858 PF00156 Phosphoribosyl transferase domain Acav_0859 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Acav_0859 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Acav_0860 PF01979 Amidohydrolase family Acav_0861 PF01553 Acyltransferase Acav_0864 PF03956 Lysine exporter LysO Acav_0865 PF08402 TOBE domain Acav_0865 PF00005 ABC transporter Acav_0866 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0867 PF03960 ArsC family Acav_0868 PF00437 Type II/IV secretion system protein Acav_0869 PF03958 Bacterial type II/III secretion system short domain Acav_0869 PF00263 Bacterial type II and III secretion system protein Acav_0874 PF07963 Prokaryotic N-terminal methylation motif Acav_0874 PF11612 Type II secretion system (T2SS), protein J Acav_0875 PF07963 Prokaryotic N-terminal methylation motif Acav_0875 PF02501 Type II secretion system (T2SS), protein I Acav_0876 PF07963 Prokaryotic N-terminal methylation motif Acav_0876 PF12019 Type II transport protein GspH Acav_0877 PF07963 Prokaryotic N-terminal methylation motif Acav_0877 PF08334 Type II secretion system (T2SS), protein G Acav_0880 PF02654 Cobalamin-5-phosphate synthase Acav_0881 PF00291 Pyridoxal-phosphate dependent enzyme Acav_0881 PF00585 C-terminal regulatory domain of Threonine dehydratase Acav_0882 PF02566 OsmC-like protein Acav_0883 PF03232 Ubiquinone biosynthesis protein COQ7 Acav_0884 PF13609 Gram-negative porin Acav_0885 PF00267 Gram-negative porin Acav_0886 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0887 PF07687 Peptidase dimerisation domain Acav_0887 PF01546 Peptidase family M20/M25/M40 Acav_0888 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Acav_0889 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0889 PF12911 N-terminal TM domain of oligopeptide transport permease C Acav_0890 PF00005 ABC transporter Acav_0890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Acav_0891 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Acav_0891 PF00005 ABC transporter Acav_0894 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0894 PF02203 Tar ligand binding domain homologue Acav_0894 PF00672 HAMP domain Acav_0896 PF02801 Beta-ketoacyl synthase, C-terminal domain Acav_0896 PF00109 Beta-ketoacyl synthase, N-terminal domain Acav_0898 PF01418 Helix-turn-helix domain, rpiR family Acav_0898 PF02685 Glucokinase Acav_0898 PF01380 SIS domain Acav_0899 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Acav_0899 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Acav_0900 PF00923 Transaldolase/Fructose-6-phosphate aldolase Acav_0901 PF00342 Phosphoglucose isomerase Acav_0902 PF02203 Tar ligand binding domain homologue Acav_0902 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_0902 PF00672 HAMP domain Acav_0904 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0905 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0906 PF00005 ABC transporter Acav_0906 PF08402 TOBE domain Acav_0907 PF08125 Mannitol dehydrogenase C-terminal domain Acav_0907 PF01232 Mannitol dehydrogenase Rossmann domain Acav_0909 PF00923 Transaldolase/Fructose-6-phosphate aldolase Acav_0910 PF00294 pfkB family carbohydrate kinase Acav_0911 PF12833 Helix-turn-helix domain Acav_0911 PF00072 Response regulator receiver domain Acav_0912 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Acav_0912 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Acav_0913 PF00118 TCP-1/cpn60 chaperonin family Acav_0914 PF00166 Chaperonin 10 Kd subunit Acav_0915 PF00679 Elongation factor G C-terminus Acav_0915 PF03144 Elongation factor Tu domain 2 Acav_0915 PF14492 Elongation Factor G, domain II Acav_0915 PF03764 Elongation factor G, domain IV Acav_0915 PF00009 Elongation factor Tu GTP binding domain Acav_0917 PF16861 Carbamoyltransferase C-terminus Acav_0917 PF02543 Carbamoyltransferase N-terminus Acav_0920 PF00483 Nucleotidyl transferase Acav_0920 PF01050 Mannose-6-phosphate isomerase Acav_0921 PF00535 Glycosyl transferase family 2 Acav_0923 PF02709 N-terminal domain of galactosyltransferase Acav_0923 PF00535 Glycosyl transferase family 2 Acav_0925 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Acav_0926 PF02350 UDP-N-acetylglucosamine 2-epimerase Acav_0929 PF16363 GDP-mannose 4,6 dehydratase Acav_0930 PF01370 NAD dependent epimerase/dehydratase family Acav_0931 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Acav_0935 PF00534 Glycosyl transferases group 1 Acav_0936 PF00534 Glycosyl transferases group 1 Acav_0936 PF13439 Glycosyltransferase Family 4 Acav_0938 PF00440 Bacterial regulatory proteins, tetR family Acav_0938 PF08362 YcdC-like protein, C-terminal region Acav_0939 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_0939 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Acav_0940 PF01180 Dihydroorotate dehydrogenase Acav_0941 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Acav_0942 PF01979 Amidohydrolase family Acav_0943 PF07687 Peptidase dimerisation domain Acav_0943 PF01546 Peptidase family M20/M25/M40 Acav_0948 PF02540 NAD synthase Acav_0948 PF00795 Carbon-nitrogen hydrolase Acav_0949 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Acav_0949 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Acav_0952 PF02773 S-adenosylmethionine synthetase, C-terminal domain Acav_0952 PF02772 S-adenosylmethionine synthetase, central domain Acav_0952 PF00438 S-adenosylmethionine synthetase, N-terminal domain Acav_0954 PF03279 Bacterial lipid A biosynthesis acyltransferase Acav_0956 PF01926 50S ribosome-binding GTPase Acav_0957 PF00034 Cytochrome c Acav_0958 PF05140 ResB-like family Acav_0959 PF01578 Cytochrome C assembly protein Acav_0960 PF00174 Oxidoreductase molybdopterin binding domain Acav_0961 PF01794 Ferric reductase like transmembrane component Acav_0963 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Acav_0963 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Acav_0965 PF01491 Frataxin-like domain Acav_0966 PF17092 Penicillin-binding protein OB-like domain Acav_0966 PF00905 Penicillin binding protein transpeptidase domain Acav_0966 PF00912 Transglycosylase Acav_0971 PF07660 Secretin and TonB N terminus short domain Acav_0971 PF03958 Bacterial type II/III secretion system short domain Acav_0971 PF11741 AMIN domain Acav_0971 PF00263 Bacterial type II and III secretion system protein Acav_0973 PF01202 Shikimate kinase Acav_0974 PF01761 3-dehydroquinate synthase Acav_0975 PF13286 Phosphohydrolase-associated domain Acav_0975 PF01966 HD domain Acav_0979 PF00310 Glutamine amidotransferases class-II Acav_0979 PF01493 GXGXG motif Acav_0979 PF01645 Conserved region in glutamate synthase Acav_0979 PF04898 Glutamate synthase central domain Acav_0980 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Acav_0980 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_0981 PF00497 Bacterial extracellular solute-binding proteins, family 3 Acav_0982 PF00528 Binding-protein-dependent transport system inner membrane component Acav_0983 PF00005 ABC transporter Acav_0984 PF00005 ABC transporter Acav_0985 PF02405 Permease MlaE Acav_0986 PF02470 MlaD protein Acav_0991 PF00005 ABC transporter Acav_0992 PF01061 ABC-2 type transporter Acav_0993 PF01722 BolA-like protein Acav_0994 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Acav_0995 PF01634 ATP phosphoribosyltransferase Acav_0999 PF00392 Bacterial regulatory proteins, gntR family Acav_0999 PF00155 Aminotransferase class I and II Acav_1002 PF00155 Aminotransferase class I and II Acav_1003 PF00475 Imidazoleglycerol-phosphate dehydratase Acav_1004 PF00117 Glutamine amidotransferase class-I Acav_1005 PF00977 Histidine biosynthesis protein Acav_1009 PF17102 Stealth protein CR3, conserved region 3 Acav_1009 PF00534 Glycosyl transferases group 1 Acav_1009 PF17101 Stealth protein CR1, conserved region 1 Acav_1009 PF11380 Stealth protein CR2, conserved region 2 Acav_1009 PF17103 Stealth protein CR4, conserved region 4 Acav_1015 PF16363 GDP-mannose 4,6 dehydratase Acav_1016 PF00375 Sodium:dicarboxylate symporter family Acav_1018 PF00977 Histidine biosynthesis protein Acav_1019 PF01502 Phosphoribosyl-AMP cyclohydrolase Acav_1020 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Acav_1023 PF01230 HIT domain Acav_1024 PF02416 mttA/Hcf106 family Acav_1025 PF02416 mttA/Hcf106 family Acav_1026 PF00902 Sec-independent protein translocase protein (TatC) Acav_1034 PF17820 PDZ domain Acav_1034 PF13180 PDZ domain Acav_1035 PF00083 Sugar (and other) transporter Acav_1035 PF08946 Osmosensory transporter coiled coil Acav_1037 PF01784 NIF3 (NGG1p interacting factor 3) Acav_1038 PF13519 von Willebrand factor type A domain Acav_1039 PF01882 Protein of unknown function DUF58 Acav_1040 PF17863 AAA lid domain Acav_1040 PF07726 ATPase family associated with various cellular activities (AAA) Acav_1041 PF00595 PDZ domain Acav_1042 PF01026 TatD related DNase Acav_1046 PF07331 Tripartite tricarboxylate transporter TctB family Acav_1047 PF01970 Tripartite tricarboxylate transporter TctA family Acav_1052 PF00106 short chain dehydrogenase Acav_1053 PF00171 Aldehyde dehydrogenase family Acav_1055 PF00202 Aminotransferase class-III Acav_1057 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Acav_1057 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Acav_1060 PF01370 NAD dependent epimerase/dehydratase family Acav_1063 PF01774 UreD urease accessory protein Acav_1067 PF01176 Translation initiation factor 1A / IF-1 Acav_1070 PF01261 Xylose isomerase-like TIM barrel Acav_1073 PF02463 RecF/RecN/SMC N terminal domain Acav_1074 PF00528 Binding-protein-dependent transport system inner membrane component Acav_1075 PF00005 ABC transporter Acav_1078 PF01515 Phosphate acetyl/butaryl transferase Acav_1078 PF00390 Malic enzyme, N-terminal domain Acav_1078 PF03949 Malic enzyme, NAD binding domain Acav_1079 PF00860 Permease family Acav_1081 PF01177 Asp/Glu/Hydantoin racemase Acav_1082 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Acav_1083 PF00392 Bacterial regulatory proteins, gntR family Acav_1083 PF07729 FCD domain Acav_1084 PF00672 HAMP domain Acav_1084 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_1084 PF02203 Tar ligand binding domain homologue Acav_1085 PF00375 Sodium:dicarboxylate symporter family Acav_1090 PF00685 Sulfotransferase domain Acav_1093 PF00664 ABC transporter transmembrane region Acav_1093 PF00005 ABC transporter Acav_1095 PF16363 GDP-mannose 4,6 dehydratase Acav_1098 PF13537 Glutamine amidotransferase domain Acav_1098 PF00733 Asparagine synthase Acav_1102 PF13439 Glycosyltransferase Family 4 Acav_1102 PF00534 Glycosyl transferases group 1 Acav_1103 PF03808 Glycosyl transferase WecB/TagA/CpsF family Acav_1105 PF02397 Bacterial sugar transferase Acav_1106 PF07687 Peptidase dimerisation domain Acav_1106 PF01546 Peptidase family M20/M25/M40 Acav_1107 PF07687 Peptidase dimerisation domain Acav_1107 PF01546 Peptidase family M20/M25/M40 Acav_1109 PF07729 FCD domain Acav_1109 PF00392 Bacterial regulatory proteins, gntR family Acav_1110 PF13660 Domain of unknown function (DUF4147) Acav_1110 PF05161 MOFRL family Acav_1113 PF00576 HIUase/Transthyretin family Acav_1117 PF03707 Bacterial signalling protein N terminal repeat Acav_1117 PF00990 Diguanylate cyclase, GGDEF domain Acav_1117 PF00563 EAL domain Acav_1118 PF00072 Response regulator receiver domain Acav_1118 PF00196 Bacterial regulatory proteins, luxR family Acav_1119 PF17200 Single Cache domain 2 Acav_1119 PF07730 Histidine kinase Acav_1120 PF01042 Endoribonuclease L-PSP Acav_1122 PF13609 Gram-negative porin Acav_1125 PF01266 FAD dependent oxidoreductase Acav_1125 PF05690 Thiazole biosynthesis protein ThiG Acav_1126 PF00563 EAL domain Acav_1126 PF05231 MASE1 Acav_1126 PF08447 PAS fold Acav_1126 PF08448 PAS fold Acav_1126 PF13426 PAS domain Acav_1126 PF00990 Diguanylate cyclase, GGDEF domain Acav_1130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Acav_1130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Acav_1131 PF00111 2Fe-2S iron-sulfur cluster binding domain Acav_1131 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Acav_1131 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Acav_1131 PF01799 [2Fe-2S] binding domain Acav_1133 PF00005 ABC transporter Acav_1136 PF02608 ABC transporter substrate-binding protein PnrA-like Acav_1137 PF07969 Amidohydrolase family Acav_1138 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1139 PF00795 Carbon-nitrogen hydrolase Acav_1140 PF03466 LysR substrate binding domain Acav_1140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1141 PF01266 FAD dependent oxidoreductase Acav_1142 PF00005 ABC transporter Acav_1144 PF00497 Bacterial extracellular solute-binding proteins, family 3 Acav_1146 PF00355 Rieske [2Fe-2S] domain Acav_1148 PF00962 Adenosine/AMP deaminase Acav_1150 PF01804 Penicillin amidase Acav_1151 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Acav_1151 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Acav_1152 PF02608 ABC transporter substrate-binding protein PnrA-like Acav_1153 PF01979 Amidohydrolase family Acav_1154 PF00692 dUTPase Acav_1157 PF04228 Putative neutral zinc metallopeptidase Acav_1158 PF00271 Helicase conserved C-terminal domain Acav_1158 PF00270 DEAD/DEAH box helicase Acav_1159 PF00149 Calcineurin-like phosphoesterase Acav_1160 PF00816 H-NS histone family Acav_1161 PF00694 Aconitase C-terminal domain Acav_1161 PF00330 Aconitase family (aconitate hydratase) Acav_1162 PF00563 EAL domain Acav_1162 PF00990 Diguanylate cyclase, GGDEF domain Acav_1162 PF08448 PAS fold Acav_1162 PF08447 PAS fold Acav_1163 PF03707 Bacterial signalling protein N terminal repeat Acav_1163 PF00990 Diguanylate cyclase, GGDEF domain Acav_1163 PF00563 EAL domain Acav_1164 PF01494 FAD binding domain Acav_1166 PF03301 Tryptophan 2,3-dioxygenase Acav_1167 PF00266 Aminotransferase class-V Acav_1168 PF04199 Putative cyclase Acav_1169 PF01037 Lrp/AsnC ligand binding domain Acav_1170 PF03692 Putative zinc- or iron-chelating domain Acav_1172 PF07670 Nucleoside recognition Acav_1172 PF07664 Ferrous iron transport protein B C terminus Acav_1172 PF02421 Ferrous iron transport protein B Acav_1176 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Acav_1176 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Acav_1177 PF00202 Aminotransferase class-III Acav_1179 PF06039 Malate:quinone oxidoreductase (Mqo) Acav_1180 PF01649 Ribosomal protein S20 Acav_1181 PF03023 Lipid II flippase MurJ Acav_1182 PF13369 Transglutaminase-like superfamily Acav_1183 PF14489 QueF-like protein Acav_1183 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Acav_1185 PF03883 Peroxide stress protein YaaA Acav_1186 PF10150 Ribonuclease E/G family Acav_1186 PF12111 Polyribonucleotide phosphorylase C terminal Acav_1186 PF00575 S1 RNA binding domain Acav_1188 PF00849 RNA pseudouridylate synthase Acav_1188 PF01479 S4 domain Acav_1191 PF06965 Na+/H+ antiporter 1 Acav_1191 PF01343 Peptidase family S49 Acav_1192 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Acav_1193 PF02545 Maf-like protein Acav_1194 PF02620 Large ribosomal RNA subunit accumulation protein YceD Acav_1195 PF01783 Ribosomal L32p protein family Acav_1196 PF02504 Fatty acid synthesis protein Acav_1197 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Acav_1197 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Acav_1198 PF00698 Acyl transferase domain Acav_1200 PF00550 Phosphopantetheine attachment site Acav_1201 PF02801 Beta-ketoacyl synthase, C-terminal domain Acav_1201 PF00109 Beta-ketoacyl synthase, N-terminal domain Acav_1203 PF08281 Sigma-70, region 4 Acav_1203 PF04542 Sigma-70 region 2 Acav_1206 PF13180 PDZ domain Acav_1207 PF06421 GTP-binding protein LepA C-terminus Acav_1207 PF00679 Elongation factor G C-terminus Acav_1207 PF00009 Elongation factor Tu GTP binding domain Acav_1208 PF10502 Signal peptidase, peptidase S26 Acav_1210 PF14622 Ribonuclease-III-like Acav_1210 PF00035 Double-stranded RNA binding motif Acav_1211 PF01926 50S ribosome-binding GTPase Acav_1211 PF07650 KH domain Acav_1212 PF11967 Recombination protein O N terminal Acav_1212 PF02565 Recombination protein O C terminal Acav_1213 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Acav_1214 PF01648 4'-phosphopantetheinyl transferase superfamily Acav_1215 PF00933 Glycosyl hydrolase family 3 N terminal domain Acav_1216 PF11737 Protein of unknown function (DUF3300) Acav_1218 PF00360 Phytochrome region Acav_1218 PF00563 EAL domain Acav_1218 PF01590 GAF domain Acav_1218 PF00990 Diguanylate cyclase, GGDEF domain Acav_1219 PF00152 tRNA synthetases class II (D, K and N) Acav_1219 PF01336 OB-fold nucleic acid binding domain Acav_1223 PF08241 Methyltransferase domain Acav_1224 PF02397 Bacterial sugar transferase Acav_1225 PF13439 Glycosyltransferase Family 4 Acav_1225 PF00534 Glycosyl transferases group 1 Acav_1227 PF02325 YGGT family Acav_1228 PF17848 Acetyl-coA carboxylase zinc finger domain Acav_1228 PF01039 Carboxyl transferase domain Acav_1229 PF00290 Tryptophan synthase alpha chain Acav_1230 PF00291 Pyridoxal-phosphate dependent enzyme Acav_1231 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Acav_1232 PF01416 tRNA pseudouridine synthase Acav_1234 PF02774 Semialdehyde dehydrogenase, dimerisation domain Acav_1234 PF01118 Semialdehyde dehydrogenase, NAD binding domain Acav_1237 PF00180 Isocitrate/isopropylmalate dehydrogenase Acav_1238 PF00694 Aconitase C-terminal domain Acav_1240 PF00330 Aconitase family (aconitate hydratase) Acav_1242 PF01556 DnaJ C terminal domain Acav_1242 PF00684 DnaJ central domain Acav_1242 PF00226 DnaJ domain Acav_1243 PF00012 Hsp70 protein Acav_1244 PF01025 GrpE Acav_1245 PF01250 Ribosomal protein S6 Acav_1247 PF01084 Ribosomal protein S18 Acav_1248 PF01281 Ribosomal protein L9, N-terminal domain Acav_1248 PF03948 Ribosomal protein L9, C-terminal domain Acav_1249 PF03796 DnaB-like helicase C terminal domain Acav_1249 PF00772 DnaB-like helicase N terminal domain Acav_1252 PF02562 PhoH-like protein Acav_1252 PF13638 PIN domain Acav_1253 PF00578 AhpC/TSA family Acav_1255 PF00155 Aminotransferase class I and II Acav_1256 PF03447 Homoserine dehydrogenase, NAD binding domain Acav_1256 PF00742 Homoserine dehydrogenase Acav_1256 PF01842 ACT domain Acav_1257 PF00291 Pyridoxal-phosphate dependent enzyme Acav_1257 PF14821 Threonine synthase N terminus Acav_1258 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Acav_1259 PF00994 Probable molybdopterin binding domain Acav_1259 PF03454 MoeA C-terminal region (domain IV) Acav_1259 PF03453 MoeA N-terminal region (domain I and II) Acav_1261 PF00701 Dihydrodipicolinate synthetase family Acav_1266 PF02391 MoaE protein Acav_1267 PF17871 AAA lid domain Acav_1267 PF10431 C-terminal, D2-small domain, of ClpB protein Acav_1267 PF02861 Clp amino terminal domain, pathogenicity island component Acav_1267 PF07724 AAA domain (Cdc48 subfamily) Acav_1267 PF00004 ATPase family associated with various cellular activities (AAA) Acav_1269 PF00171 Aldehyde dehydrogenase family Acav_1271 PF05175 Methyltransferase small domain Acav_1273 PF01207 Dihydrouridine synthase (Dus) Acav_1274 PF13091 PLD-like domain Acav_1277 PF00312 Ribosomal protein S15 Acav_1278 PF00575 S1 RNA binding domain Acav_1278 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Acav_1278 PF00013 KH domain Acav_1278 PF01138 3' exoribonuclease family, domain 1 Acav_1278 PF03725 3' exoribonuclease family, domain 2 Acav_1279 PF02801 Beta-ketoacyl synthase, C-terminal domain Acav_1279 PF14765 Polyketide synthase dehydratase Acav_1279 PF16197 Ketoacyl-synthetase C-terminal extension Acav_1279 PF00550 Phosphopantetheine attachment site Acav_1279 PF00698 Acyl transferase domain Acav_1279 PF08240 Alcohol dehydrogenase GroES-like domain Acav_1279 PF00109 Beta-ketoacyl synthase, N-terminal domain Acav_1279 PF08659 KR domain Acav_1280 PF00121 Triosephosphate isomerase Acav_1281 PF03840 Preprotein translocase SecG subunit Acav_1282 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Acav_1283 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Acav_1284 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Acav_1285 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Acav_1287 PF10531 SLBB domain Acav_1287 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Acav_1287 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Acav_1288 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Acav_1288 PF00384 Molybdopterin oxidoreductase Acav_1288 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Acav_1289 PF00146 NADH dehydrogenase Acav_1290 PF12838 4Fe-4S dicluster domain Acav_1291 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Acav_1292 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Acav_1293 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Acav_1293 PF00361 Proton-conducting membrane transporter Acav_1294 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Acav_1294 PF00361 Proton-conducting membrane transporter Acav_1295 PF00361 Proton-conducting membrane transporter Acav_1298 PF00664 ABC transporter transmembrane region Acav_1298 PF00005 ABC transporter Acav_1299 PF00005 ABC transporter Acav_1299 PF12399 Branched-chain amino acid ATP-binding cassette transporter Acav_1300 PF00005 ABC transporter Acav_1303 PF02653 Branched-chain amino acid transport system / permease component Acav_1307 PF00535 Glycosyl transferase family 2 Acav_1307 PF13181 Tetratricopeptide repeat Acav_1311 PF00011 Hsp20/alpha crystallin family Acav_1312 PF12704 MacB-like periplasmic core domain Acav_1312 PF02687 FtsX-like permease family Acav_1312 PF00005 ABC transporter Acav_1314 PF05368 NmrA-like family Acav_1315 PF01638 HxlR-like helix-turn-helix Acav_1316 PF12146 Serine aminopeptidase, S33 Acav_1317 PF03009 Glycerophosphoryl diester phosphodiesterase family Acav_1319 PF01119 DNA mismatch repair protein, C-terminal domain Acav_1319 PF08676 MutL C terminal dimerisation domain Acav_1320 PF09335 SNARE associated Golgi protein Acav_1321 PF00561 alpha/beta hydrolase fold Acav_1324 PF01520 N-acetylmuramoyl-L-alanine amidase Acav_1324 PF11741 AMIN domain Acav_1325 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Acav_1326 PF08331 Domain of unknown function (DUF1730) Acav_1328 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1328 PF03466 LysR substrate binding domain Acav_1329 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Acav_1329 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Acav_1331 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1332 PF02899 Phage integrase, N-terminal SAM-like domain Acav_1332 PF00589 Phage integrase family Acav_1333 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1334 PF00563 EAL domain Acav_1334 PF08668 HDOD domain Acav_1335 PF00563 EAL domain Acav_1335 PF08668 HDOD domain Acav_1336 PF04305 Protein of unknown function (DUF455) Acav_1337 PF00132 Bacterial transferase hexapeptide (six repeats) Acav_1338 PF01430 Hsp33 protein Acav_1340 PF04977 Septum formation initiator Acav_1341 PF03952 Enolase, N-terminal domain Acav_1341 PF00113 Enolase, C-terminal TIM barrel domain Acav_1343 PF00793 DAHP synthetase I family Acav_1344 PF06418 CTP synthase N-terminus Acav_1344 PF00117 Glutamine amidotransferase class-I Acav_1345 PF04127 DNA / pantothenate metabolism flavoprotein Acav_1345 PF02441 Flavoprotein Acav_1346 PF00692 dUTPase Acav_1348 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Acav_1349 PF08007 Cupin superfamily protein Acav_1351 PF00753 Metallo-beta-lactamase superfamily Acav_1352 PF06804 NlpB/DapX lipoprotein Acav_1353 PF00701 Dihydrodipicolinate synthetase family Acav_1354 PF13649 Methyltransferase domain Acav_1357 PF00986 DNA gyrase B subunit, carboxyl terminus Acav_1357 PF00204 DNA gyrase B Acav_1357 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_1357 PF01751 Toprim domain Acav_1358 PF01464 Transglycosylase SLT domain Acav_1359 PF00521 DNA gyrase/topoisomerase IV, subunit A Acav_1360 PF02203 Tar ligand binding domain homologue Acav_1360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_1360 PF00672 HAMP domain Acav_1361 PF02203 Tar ligand binding domain homologue Acav_1361 PF00672 HAMP domain Acav_1361 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_1362 PF08543 Phosphomethylpyrimidine kinase Acav_1367 PF03772 Competence protein Acav_1367 PF00753 Metallo-beta-lactamase superfamily Acav_1368 PF14403 Circularly permuted ATP-grasp type 2 Acav_1371 PF00293 NUDIX domain Acav_1372 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Acav_1372 PF05221 S-adenosyl-L-homocysteine hydrolase Acav_1374 PF09905 DNA-binding protein VF530 Acav_1375 PF13649 Methyltransferase domain Acav_1376 PF00109 Beta-ketoacyl synthase, N-terminal domain Acav_1376 PF02801 Beta-ketoacyl synthase, C-terminal domain Acav_1378 PF00109 Beta-ketoacyl synthase, N-terminal domain Acav_1378 PF02801 Beta-ketoacyl synthase, C-terminal domain Acav_1381 PF02801 Beta-ketoacyl synthase, C-terminal domain Acav_1381 PF00109 Beta-ketoacyl synthase, N-terminal domain Acav_1387 PF07977 FabA-like domain Acav_1388 PF00501 AMP-binding enzyme Acav_1388 PF13193 AMP-binding enzyme C-terminal domain Acav_1390 PF00550 Phosphopantetheine attachment site Acav_1391 PF00550 Phosphopantetheine attachment site Acav_1395 PF03466 LysR substrate binding domain Acav_1395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1396 PF07859 alpha/beta hydrolase fold Acav_1397 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Acav_1398 PF00873 AcrB/AcrD/AcrF family Acav_1399 PF02321 Outer membrane efflux protein Acav_1400 PF00171 Aldehyde dehydrogenase family Acav_1402 PF07715 TonB-dependent Receptor Plug Domain Acav_1402 PF00593 TonB dependent receptor Acav_1407 PF07715 TonB-dependent Receptor Plug Domain Acav_1407 PF00593 TonB dependent receptor Acav_1408 PF00210 Ferritin-like domain Acav_1409 PF00578 AhpC/TSA family Acav_1409 PF10417 C-terminal domain of 1-Cys peroxiredoxin Acav_1410 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_1410 PF13192 Thioredoxin domain Acav_1416 PF03618 Kinase/pyrophosphorylase Acav_1417 PF00391 PEP-utilising enzyme, mobile domain Acav_1417 PF02896 PEP-utilising enzyme, TIM barrel domain Acav_1417 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Acav_1419 PF00474 Sodium:solute symporter family Acav_1422 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Acav_1424 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1424 PF03466 LysR substrate binding domain Acav_1425 PF00682 HMGL-like Acav_1426 PF02515 CoA-transferase family III Acav_1427 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1428 PF00892 EamA-like transporter family Acav_1429 PF06903 VirK protein Acav_1430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1430 PF03466 LysR substrate binding domain Acav_1431 PF00701 Dihydrodipicolinate synthetase family Acav_1432 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1434 PF13378 Enolase C-terminal domain-like Acav_1438 PF08546 Ketopantoate reductase PanE/ApbA C terminal Acav_1438 PF02558 Ketopantoate reductase PanE/ApbA Acav_1443 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_1443 PF02203 Tar ligand binding domain homologue Acav_1443 PF00672 HAMP domain Acav_1444 PF01011 PQQ enzyme repeat Acav_1445 PF04546 Sigma-70, non-essential region Acav_1445 PF03979 Sigma-70 factor, region 1.1 Acav_1445 PF00140 Sigma-70 factor, region 1.2 Acav_1445 PF04542 Sigma-70 region 2 Acav_1445 PF04545 Sigma-70, region 4 Acav_1445 PF04539 Sigma-70 region 3 Acav_1446 PF01807 CHC2 zinc finger Acav_1446 PF08275 DNA primase catalytic core, N-terminal domain Acav_1446 PF08278 DNA primase DnaG DnaB-binding Acav_1446 PF10410 DnaB-helicase binding domain of primase Acav_1447 PF13188 PAS domain Acav_1447 PF03707 Bacterial signalling protein N terminal repeat Acav_1447 PF00990 Diguanylate cyclase, GGDEF domain Acav_1447 PF00563 EAL domain Acav_1448 PF03480 Bacterial extracellular solute-binding protein, family 7 Acav_1450 PF16655 PhoD-like phosphatase, N-terminal domain Acav_1450 PF09423 PhoD-like phosphatase Acav_1451 PF00990 Diguanylate cyclase, GGDEF domain Acav_1451 PF00072 Response regulator receiver domain Acav_1452 PF00107 Zinc-binding dehydrogenase Acav_1452 PF08659 KR domain Acav_1452 PF00698 Acyl transferase domain Acav_1452 PF02801 Beta-ketoacyl synthase, C-terminal domain Acav_1452 PF00550 Phosphopantetheine attachment site Acav_1452 PF08240 Alcohol dehydrogenase GroES-like domain Acav_1452 PF00109 Beta-ketoacyl synthase, N-terminal domain Acav_1452 PF14765 Polyketide synthase dehydratase Acav_1452 PF16197 Ketoacyl-synthetase C-terminal extension Acav_1453 PF01975 Survival protein SurE Acav_1455 PF01551 Peptidase family M23 Acav_1455 PF01476 LysM domain Acav_1456 PF01479 S4 domain Acav_1456 PF00849 RNA pseudouridylate synthase Acav_1457 PF04079 Segregation and condensation complex subunit ScpB Acav_1458 PF00849 RNA pseudouridylate synthase Acav_1458 PF01479 S4 domain Acav_1459 PF00334 Nucleoside diphosphate kinase Acav_1460 PF04055 Radical SAM superfamily Acav_1463 PF04551 GcpE protein Acav_1464 PF03129 Anticodon binding domain Acav_1464 PF13393 Histidyl-tRNA synthetase Acav_1466 PF13360 PQQ-like domain Acav_1467 PF01926 50S ribosome-binding GTPase Acav_1467 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Acav_1468 PF17209 Hfq protein Acav_1469 PF16360 GTP-binding GTPase Middle Region Acav_1469 PF01926 50S ribosome-binding GTPase Acav_1469 PF13167 GTP-binding GTPase N-terminal Acav_1470 PF01145 SPFH domain / Band 7 family Acav_1470 PF12221 Bacterial membrane protein N terminal Acav_1471 PF01145 SPFH domain / Band 7 family Acav_1472 PF13393 Histidyl-tRNA synthetase Acav_1473 PF00709 Adenylosuccinate synthetase Acav_1474 PF00156 Phosphoribosyl transferase domain Acav_1475 PF01479 S4 domain Acav_1475 PF00849 RNA pseudouridylate synthase Acav_1483 PF00989 PAS fold Acav_1483 PF00512 His Kinase A (phospho-acceptor) domain Acav_1483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_1484 PF02954 Bacterial regulatory protein, Fis family Acav_1484 PF00072 Response regulator receiver domain Acav_1484 PF00158 Sigma-54 interaction domain Acav_1486 PF03372 Endonuclease/Exonuclease/phosphatase family Acav_1487 PF00186 Dihydrofolate reductase Acav_1489 PF00303 Thymidylate synthase Acav_1491 PF01565 FAD binding domain Acav_1491 PF02913 FAD linked oxidases, C-terminal domain Acav_1493 PF03631 Virulence factor BrkB Acav_1494 PF01593 Flavin containing amine oxidoreductase Acav_1496 PF02190 ATP-dependent protease La (LON) substrate-binding domain Acav_1496 PF05362 Lon protease (S16) C-terminal proteolytic domain Acav_1496 PF00004 ATPase family associated with various cellular activities (AAA) Acav_1497 PF06689 ClpX C4-type zinc finger Acav_1497 PF10431 C-terminal, D2-small domain, of ClpB protein Acav_1497 PF07724 AAA domain (Cdc48 subfamily) Acav_1498 PF00574 Clp protease Acav_1499 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Acav_1499 PF05698 Bacterial trigger factor protein (TF) C-terminus Acav_1499 PF05697 Bacterial trigger factor protein (TF) Acav_1500 PF00873 AcrB/AcrD/AcrF family Acav_1501 PF13533 Biotin-lipoyl like Acav_1505 PF00069 Protein kinase domain Acav_1505 PF03793 PASTA domain Acav_1511 PF13488 Glycine zipper Acav_1511 PF00691 OmpA family Acav_1521 PF10431 C-terminal, D2-small domain, of ClpB protein Acav_1521 PF00004 ATPase family associated with various cellular activities (AAA) Acav_1521 PF17871 AAA lid domain Acav_1521 PF07724 AAA domain (Cdc48 subfamily) Acav_1523 PF01863 Protein of unknown function DUF45 Acav_1524 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Acav_1524 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Acav_1525 PF00941 FAD binding domain in molybdopterin dehydrogenase Acav_1525 PF03450 CO dehydrogenase flavoprotein C-terminal domain Acav_1526 PF10518 TAT (twin-arginine translocation) pathway signal sequence Acav_1526 PF01799 [2Fe-2S] binding domain Acav_1526 PF00111 2Fe-2S iron-sulfur cluster binding domain Acav_1527 PF01177 Asp/Glu/Hydantoin racemase Acav_1529 PF00990 Diguanylate cyclase, GGDEF domain Acav_1529 PF03707 Bacterial signalling protein N terminal repeat Acav_1529 PF00563 EAL domain Acav_1530 PF10415 Fumarase C C-terminus Acav_1530 PF00206 Lyase Acav_1532 PF00486 Transcriptional regulatory protein, C terminal Acav_1532 PF00072 Response regulator receiver domain Acav_1533 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_1533 PF00512 His Kinase A (phospho-acceptor) domain Acav_1533 PF00672 HAMP domain Acav_1534 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Acav_1535 PF00528 Binding-protein-dependent transport system inner membrane component Acav_1536 PF00571 CBS domain Acav_1536 PF00005 ABC transporter Acav_1537 PF03350 Uncharacterized protein family, UPF0114 Acav_1539 PF16177 Acetyl-coenzyme A synthetase N-terminus Acav_1539 PF00501 AMP-binding enzyme Acav_1539 PF13193 AMP-binding enzyme C-terminal domain Acav_1541 PF00034 Cytochrome c Acav_1543 PF00920 Dehydratase family Acav_1544 PF00210 Ferritin-like domain Acav_1547 PF01790 Prolipoprotein diacylglyceryl transferase Acav_1548 PF00392 Bacterial regulatory proteins, gntR family Acav_1548 PF07729 FCD domain Acav_1550 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1551 PF00378 Enoyl-CoA hydratase/isomerase Acav_1552 PF00501 AMP-binding enzyme Acav_1552 PF13193 AMP-binding enzyme C-terminal domain Acav_1553 PF03466 LysR substrate binding domain Acav_1553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1554 PF01979 Amidohydrolase family Acav_1555 PF13458 Periplasmic binding protein Acav_1557 PF02653 Branched-chain amino acid transport system / permease component Acav_1557 PF11862 Domain of unknown function (DUF3382) Acav_1558 PF00005 ABC transporter Acav_1559 PF00005 ABC transporter Acav_1560 PF00582 Universal stress protein family Acav_1561 PF00403 Heavy-metal-associated domain Acav_1563 PF00115 Cytochrome C and Quinol oxidase polypeptide I Acav_1566 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Acav_1566 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Acav_1567 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Acav_1567 PF13746 4Fe-4S dicluster domain Acav_1567 PF12801 4Fe-4S binding domain Acav_1570 PF13545 Crp-like helix-turn-helix domain Acav_1570 PF00027 Cyclic nucleotide-binding domain Acav_1571 PF04055 Radical SAM superfamily Acav_1571 PF06969 HemN C-terminal domain Acav_1573 PF00072 Response regulator receiver domain Acav_1574 PF00563 EAL domain Acav_1574 PF00990 Diguanylate cyclase, GGDEF domain Acav_1574 PF03707 Bacterial signalling protein N terminal repeat Acav_1577 PF07715 TonB-dependent Receptor Plug Domain Acav_1577 PF00593 TonB dependent receptor Acav_1578 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Acav_1578 PF07685 CobB/CobQ-like glutamine amidotransferase domain Acav_1579 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Acav_1581 PF01032 FecCD transport family Acav_1582 PF00005 ABC transporter Acav_1583 PF12557 Cob(I)alamin adenosyltransferase N terminal Acav_1583 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Acav_1584 PF00881 Nitroreductase family Acav_1585 PF03186 CobD/Cbib protein Acav_1590 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Acav_1590 PF07685 CobB/CobQ-like glutamine amidotransferase domain Acav_1591 PF02277 Phosphoribosyltransferase Acav_1594 PF00005 ABC transporter Acav_1594 PF08402 TOBE domain Acav_1596 PF00528 Binding-protein-dependent transport system inner membrane component Acav_1597 PF00528 Binding-protein-dependent transport system inner membrane component Acav_1601 PF00083 Sugar (and other) transporter Acav_1603 PF00583 Acetyltransferase (GNAT) family Acav_1604 PF00633 Helix-hairpin-helix motif Acav_1604 PF00730 HhH-GPD superfamily base excision DNA repair protein Acav_1604 PF10576 Iron-sulfur binding domain of endonuclease III Acav_1605 PF00155 Aminotransferase class I and II Acav_1607 PF00248 Aldo/keto reductase family Acav_1609 PF00271 Helicase conserved C-terminal domain Acav_1609 PF00270 DEAD/DEAH box helicase Acav_1613 PF04405 Domain of Unknown function (DUF542) Acav_1613 PF01814 Hemerythrin HHE cation binding domain Acav_1614 PF02082 Transcriptional regulator Acav_1615 PF08450 SMP-30/Gluconolactonase/LRE-like region Acav_1619 PF00732 GMC oxidoreductase Acav_1619 PF05199 GMC oxidoreductase Acav_1620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1620 PF03466 LysR substrate binding domain Acav_1621 PF01810 LysE type translocator Acav_1622 PF03180 NLPA lipoprotein Acav_1625 PF07519 Tannase and feruloyl esterase Acav_1627 PF00271 Helicase conserved C-terminal domain Acav_1627 PF03461 TRCF domain Acav_1627 PF17757 UvrB interaction domain Acav_1627 PF02559 CarD-like/TRCF domain Acav_1627 PF00270 DEAD/DEAH box helicase Acav_1628 PF02542 YgbB family Acav_1628 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Acav_1629 PF02542 YgbB family Acav_1629 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Acav_1630 PF00672 HAMP domain Acav_1630 PF00512 His Kinase A (phospho-acceptor) domain Acav_1630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_1631 PF00072 Response regulator receiver domain Acav_1631 PF00486 Transcriptional regulatory protein, C terminal Acav_1633 PF00106 short chain dehydrogenase Acav_1635 PF13291 ACT domain Acav_1635 PF04607 Region found in RelA / SpoT proteins Acav_1635 PF02824 TGS domain Acav_1642 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_1642 PF02203 Tar ligand binding domain homologue Acav_1642 PF00672 HAMP domain Acav_1649 PF01965 DJ-1/PfpI family Acav_1651 PF07879 PHB/PHA accumulation regulator DNA-binding domain Acav_1651 PF05233 PHB accumulation regulatory domain Acav_1653 PF00294 pfkB family carbohydrate kinase Acav_1654 PF08666 SAF domain Acav_1654 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Acav_1655 PF05336 L-rhamnose mutarotase Acav_1656 PF08125 Mannitol dehydrogenase C-terminal domain Acav_1656 PF01232 Mannitol dehydrogenase Rossmann domain Acav_1657 PF00107 Zinc-binding dehydrogenase Acav_1657 PF08240 Alcohol dehydrogenase GroES-like domain Acav_1659 PF00248 Aldo/keto reductase family Acav_1661 PF02653 Branched-chain amino acid transport system / permease component Acav_1662 PF00005 ABC transporter Acav_1663 PF00392 Bacterial regulatory proteins, gntR family Acav_1663 PF07729 FCD domain Acav_1664 PF03812 2-keto-3-deoxygluconate permease Acav_1666 PF01557 Fumarylacetoacetate (FAA) hydrolase family Acav_1670 PF04055 Radical SAM superfamily Acav_1670 PF18693 TRAM domain Acav_1670 PF00919 Uncharacterized protein family UPF0004 Acav_1672 PF01566 Natural resistance-associated macrophage protein Acav_1673 PF07690 Major Facilitator Superfamily Acav_1678 PF09285 Elongation factor P, C-terminal Acav_1678 PF08207 Elongation factor P (EF-P) KOW-like domain Acav_1678 PF01132 Elongation factor P (EF-P) OB domain Acav_1681 PF02515 CoA-transferase family III Acav_1682 PF00682 HMGL-like Acav_1683 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1684 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1686 PF01112 Asparaginase Acav_1687 PF00005 ABC transporter Acav_1687 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Acav_1688 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Acav_1689 PF00528 Binding-protein-dependent transport system inner membrane component Acav_1690 PF00528 Binding-protein-dependent transport system inner membrane component Acav_1690 PF12911 N-terminal TM domain of oligopeptide transport permease C Acav_1691 PF03576 Peptidase family S58 Acav_1694 PF01541 GIY-YIG catalytic domain Acav_1694 PF08459 UvrC Helix-hairpin-helix N-terminal Acav_1695 PF01066 CDP-alcohol phosphatidyltransferase Acav_1696 PF00216 Bacterial DNA-binding protein Acav_1697 PF05698 Bacterial trigger factor protein (TF) C-terminus Acav_1698 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1699 PF00206 Lyase Acav_1699 PF14698 Argininosuccinate lyase C-terminal Acav_1700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1700 PF03466 LysR substrate binding domain Acav_1702 PF00557 Metallopeptidase family M24 Acav_1704 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Acav_1705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Acav_1706 PF00106 short chain dehydrogenase Acav_1707 PF03442 Carbohydrate binding domain X2 Acav_1707 PF00942 Cellulose binding domain Acav_1710 PF00561 alpha/beta hydrolase fold Acav_1712 PF01494 FAD binding domain Acav_1713 PF00171 Aldehyde dehydrogenase family Acav_1714 PF00171 Aldehyde dehydrogenase family Acav_1715 PF00881 Nitroreductase family Acav_1719 PF07044 Protein of unknown function (DUF1329) Acav_1720 PF01292 Prokaryotic cytochrome b561 Acav_1721 PF00171 Aldehyde dehydrogenase family Acav_1722 PF12833 Helix-turn-helix domain Acav_1724 PF00672 HAMP domain Acav_1724 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_1724 PF02203 Tar ligand binding domain homologue Acav_1725 PF00202 Aminotransferase class-III Acav_1730 PF02254 TrkA-N domain Acav_1730 PF00999 Sodium/hydrogen exchanger family Acav_1732 PF00270 DEAD/DEAH box helicase Acav_1732 PF00271 Helicase conserved C-terminal domain Acav_1733 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Acav_1733 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Acav_1734 PF00005 ABC transporter Acav_1734 PF12848 ABC transporter Acav_1737 PF03576 Peptidase family S58 Acav_1738 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term Acav_1738 PF12833 Helix-turn-helix domain Acav_1739 PF00171 Aldehyde dehydrogenase family Acav_1740 PF00732 GMC oxidoreductase Acav_1740 PF05199 GMC oxidoreductase Acav_1741 PF00743 Flavin-binding monooxygenase-like Acav_1744 PF13180 PDZ domain Acav_1747 PF07732 Multicopper oxidase Acav_1747 PF07731 Multicopper oxidase Acav_1747 PF00394 Multicopper oxidase Acav_1752 PF00403 Heavy-metal-associated domain Acav_1753 PF13411 MerR HTH family regulatory protein Acav_1758 PF01256 Carbohydrate kinase Acav_1758 PF03853 YjeF-related protein N-terminus Acav_1759 PF01266 FAD dependent oxidoreductase Acav_1760 PF00318 Ribosomal protein S2 Acav_1761 PF00889 Elongation factor TS Acav_1762 PF00696 Amino acid kinase family Acav_1763 PF01765 Ribosome recycling factor Acav_1764 PF01255 Putative undecaprenyl diphosphate synthase Acav_1766 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Acav_1766 PF13288 DXP reductoisomerase C-terminal domain Acav_1766 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Acav_1767 PF17820 PDZ domain Acav_1767 PF02163 Peptidase family M50 Acav_1768 PF01103 Surface antigen Acav_1768 PF07244 Surface antigen variable number repeat Acav_1770 PF00132 Bacterial transferase hexapeptide (six repeats) Acav_1770 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Acav_1771 PF07977 FabA-like domain Acav_1772 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Acav_1772 PF00132 Bacterial transferase hexapeptide (six repeats) Acav_1773 PF02684 Lipid-A-disaccharide synthetase Acav_1774 PF01351 Ribonuclease HII Acav_1775 PF08032 RNA 2'-O ribose methyltransferase substrate binding Acav_1775 PF00588 SpoU rRNA Methylase family Acav_1778 PF00593 TonB dependent receptor Acav_1778 PF07715 TonB-dependent Receptor Plug Domain Acav_1781 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Acav_1782 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Acav_1782 PF01433 Peptidase family M1 domain Acav_1782 PF11940 Domain of unknown function (DUF3458) Ig-like fold Acav_1784 PF02463 RecF/RecN/SMC N terminal domain Acav_1786 PF12697 Alpha/beta hydrolase family Acav_1787 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Acav_1787 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Acav_1788 PF00248 Aldo/keto reductase family Acav_1789 PF04073 Aminoacyl-tRNA editing domain Acav_1790 PF02660 Glycerol-3-phosphate acyltransferase Acav_1793 PF04461 Protein of unknown function (DUF520) Acav_1794 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Acav_1794 PF01565 FAD binding domain Acav_1795 PF00764 Arginosuccinate synthase Acav_1796 PF06865 Pyrimidine/purine nucleoside phosphorylase Acav_1798 PF03960 ArsC family Acav_1799 PF08245 Mur ligase middle domain Acav_1799 PF02875 Mur ligase family, glutamate ligase domain Acav_1801 PF02674 Colicin V production protein Acav_1802 PF00156 Phosphoribosyl transferase domain Acav_1803 PF01053 Cys/Met metabolism PLP-dependent enzyme Acav_1804 PF00749 tRNA synthetases class I (E and Q), catalytic domain Acav_1806 PF07690 Major Facilitator Superfamily Acav_1807 PF07690 Major Facilitator Superfamily Acav_1810 PF17674 HHH domain Acav_1810 PF00575 S1 RNA binding domain Acav_1810 PF09371 Tex-like protein N-terminal domain Acav_1810 PF16921 Tex protein YqgF-like domain Acav_1813 PF00465 Iron-containing alcohol dehydrogenase Acav_1814 PF01557 Fumarylacetoacetate (FAA) hydrolase family Acav_1815 PF07859 alpha/beta hydrolase fold Acav_1817 PF01571 Aminomethyltransferase folate-binding domain Acav_1818 PF02618 YceG-like family Acav_1819 PF02223 Thymidylate kinase Acav_1822 PF01026 TatD related DNase Acav_1824 PF00005 ABC transporter Acav_1824 PF00664 ABC transporter transmembrane region Acav_1825 PF07676 WD40-like Beta Propeller Repeat Acav_1825 PF04052 TolB amino-terminal domain Acav_1826 PF00691 OmpA family Acav_1828 PF00899 ThiF family Acav_1832 PF01527 Transposase Acav_1834 PF13458 Periplasmic binding protein Acav_1835 PF02423 Ornithine cyclodeaminase/mu-crystallin family Acav_1843 PF00360 Phytochrome region Acav_1843 PF00990 Diguanylate cyclase, GGDEF domain Acav_1843 PF01590 GAF domain Acav_1843 PF00563 EAL domain Acav_1844 PF03466 LysR substrate binding domain Acav_1844 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1847 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1850 PF00034 Cytochrome c Acav_1850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Acav_1850 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Acav_1852 PF02576 RimP N-terminal domain Acav_1853 PF08529 NusA N-terminal domain Acav_1853 PF13184 NusA-like KH domain Acav_1854 PF11987 Translation-initiation factor 2 Acav_1854 PF08364 Bacterial translation initiation factor IF-2 associated region Acav_1854 PF00009 Elongation factor Tu GTP binding domain Acav_1854 PF04760 Translation initiation factor IF-2, N-terminal region Acav_1855 PF02033 Ribosome-binding factor A Acav_1856 PF01509 TruB family pseudouridylate synthase (N terminal domain) Acav_1856 PF16198 tRNA pseudouridylate synthase B C-terminal domain Acav_1858 PF03471 Transporter associated domain Acav_1858 PF03741 Integral membrane protein TerC family Acav_1859 PF00378 Enoyl-CoA hydratase/isomerase Acav_1861 PF08281 Sigma-70, region 4 Acav_1861 PF04542 Sigma-70 region 2 Acav_1863 PF01668 SmpB protein Acav_1864 PF03364 Polyketide cyclase / dehydrase and lipid transport Acav_1865 PF03658 RnfH family Ubiquitin Acav_1868 PF00478 IMP dehydrogenase / GMP reductase domain Acav_1868 PF00571 CBS domain Acav_1871 PF02540 NAD synthase Acav_1871 PF00958 GMP synthase C terminal domain Acav_1871 PF00117 Glutamine amidotransferase class-I Acav_1872 PF13356 Arm DNA-binding domain Acav_1872 PF00589 Phage integrase family Acav_1882 PF01494 FAD binding domain Acav_1883 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1883 PF03466 LysR substrate binding domain Acav_1884 PF02321 Outer membrane efflux protein Acav_1885 PF13533 Biotin-lipoyl like Acav_1886 PF07869 Protein of unknown function (DUF1656) Acav_1887 PF04632 Fusaric acid resistance protein family Acav_1888 PF01047 MarR family Acav_1889 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1889 PF03466 LysR substrate binding domain Acav_1892 PF00753 Metallo-beta-lactamase superfamily Acav_1892 PF10996 Beta-Casp domain Acav_1892 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Acav_1893 PF00106 short chain dehydrogenase Acav_1894 PF00106 short chain dehydrogenase Acav_1899 PF00593 TonB dependent receptor Acav_1899 PF07715 TonB-dependent Receptor Plug Domain Acav_1899 PF07660 Secretin and TonB N terminus short domain Acav_1900 PF02311 AraC-like ligand binding domain Acav_1900 PF12833 Helix-turn-helix domain Acav_1903 PF01494 FAD binding domain Acav_1904 PF09209 Tetracyclin repressor-like, C-terminal domain Acav_1904 PF00440 Bacterial regulatory proteins, tetR family Acav_1905 PF04717 Type VI secretion system, phage-baseplate injector Acav_1910 PF13649 Methyltransferase domain Acav_1911 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_1913 PF16736 Single Cache-like Acav_1913 PF00989 PAS fold Acav_1913 PF00512 His Kinase A (phospho-acceptor) domain Acav_1913 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_1914 PF00293 NUDIX domain Acav_1916 PF07969 Amidohydrolase family Acav_1919 PF00990 Diguanylate cyclase, GGDEF domain Acav_1921 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1922 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1923 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1924 PF00043 Glutathione S-transferase, C-terminal domain Acav_1924 PF02798 Glutathione S-transferase, N-terminal domain Acav_1925 PF06505 Activator of aromatic catabolism Acav_1925 PF00158 Sigma-54 interaction domain Acav_1925 PF02830 V4R domain Acav_1925 PF02954 Bacterial regulatory protein, Fis family Acav_1926 PF00171 Aldehyde dehydrogenase family Acav_1928 PF07715 TonB-dependent Receptor Plug Domain Acav_1928 PF00593 TonB dependent receptor Acav_1929 PF00005 ABC transporter Acav_1931 PF01032 FecCD transport family Acav_1933 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Acav_1933 PF00171 Aldehyde dehydrogenase family Acav_1933 PF01619 Proline dehydrogenase Acav_1933 PF14850 DNA-binding domain of Proline dehydrogenase Acav_1934 PF01037 Lrp/AsnC ligand binding domain Acav_1937 PF05958 tRNA (Uracil-5-)-methyltransferase Acav_1939 PF01027 Inhibitor of apoptosis-promoting Bax1 Acav_1940 PF03928 Haem-degrading Acav_1942 PF02472 Biopolymer transport protein ExbD/TolR Acav_1943 PF01618 MotA/TolQ/ExbB proton channel family Acav_1946 PF09361 Phasin protein Acav_1949 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Acav_1949 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Acav_1950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Acav_1950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Acav_1951 PF02646 RmuC family Acav_1955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Acav_1956 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Acav_1960 PF01968 Hydantoinase/oxoprolinase Acav_1960 PF05378 Hydantoinase/oxoprolinase N-terminal region Acav_1962 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Acav_1964 PF00361 Proton-conducting membrane transporter Acav_1965 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Acav_1966 PF13244 Domain of unknown function (DUF4040) Acav_1966 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Acav_1966 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Acav_1966 PF00361 Proton-conducting membrane transporter Acav_1967 PF18073 Rubredoxin metal binding domain Acav_1969 PF00216 Bacterial DNA-binding protein Acav_1970 PF00575 S1 RNA binding domain Acav_1971 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Acav_1972 PF02153 Prephenate dehydrogenase Acav_1973 PF01842 ACT domain Acav_1973 PF00800 Prephenate dehydratase Acav_1973 PF01817 Chorismate mutase type II Acav_1974 PF00266 Aminotransferase class-V Acav_1975 PF00521 DNA gyrase/topoisomerase IV, subunit A Acav_1975 PF03989 DNA gyrase C-terminal domain, beta-propeller Acav_1976 PF00691 OmpA family Acav_1978 PF13419 Haloacid dehalogenase-like hydrolase Acav_1980 PF00512 His Kinase A (phospho-acceptor) domain Acav_1980 PF00672 HAMP domain Acav_1980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_1981 PF00072 Response regulator receiver domain Acav_1981 PF00486 Transcriptional regulatory protein, C terminal Acav_1983 PF01970 Tripartite tricarboxylate transporter TctA family Acav_1984 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1985 PF13609 Gram-negative porin Acav_1987 PF03401 Tripartite tricarboxylate transporter family receptor Acav_1988 PF03466 LysR substrate binding domain Acav_1988 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_1989 PF01145 SPFH domain / Band 7 family Acav_1991 PF01276 Orn/Lys/Arg decarboxylase, major domain Acav_1991 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Acav_1991 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Acav_1992 PF02469 Fasciclin domain Acav_1994 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Acav_1995 PF00528 Binding-protein-dependent transport system inner membrane component Acav_1996 PF00528 Binding-protein-dependent transport system inner membrane component Acav_1996 PF12911 N-terminal TM domain of oligopeptide transport permease C Acav_1997 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Acav_1997 PF00005 ABC transporter Acav_1998 PF00990 Diguanylate cyclase, GGDEF domain Acav_1998 PF13426 PAS domain Acav_1998 PF05231 MASE1 Acav_1998 PF00563 EAL domain Acav_1998 PF08448 PAS fold Acav_1998 PF08447 PAS fold Acav_1999 PF01594 AI-2E family transporter Acav_2000 PF00676 Dehydrogenase E1 component Acav_2000 PF02779 Transketolase, pyrimidine binding domain Acav_2000 PF16870 2-oxoglutarate dehydrogenase C-terminal Acav_2000 PF16078 2-oxoglutarate dehydrogenase N-terminus Acav_2001 PF02817 e3 binding domain Acav_2001 PF00364 Biotin-requiring enzyme Acav_2001 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Acav_2002 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_2002 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Acav_2003 PF03969 AFG1-like ATPase Acav_2006 PF04851 Type III restriction enzyme, res subunit Acav_2006 PF13307 Helicase C-terminal domain Acav_2007 PF13525 Outer membrane lipoprotein Acav_2008 PF07733 Bacterial DNA polymerase III alpha NTPase domain Acav_2008 PF01336 OB-fold nucleic acid binding domain Acav_2008 PF14579 Helix-hairpin-helix motif Acav_2008 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Acav_2008 PF02811 PHP domain Acav_2009 PF02617 ATP-dependent Clp protease adaptor protein ClpS Acav_2010 PF00004 ATPase family associated with various cellular activities (AAA) Acav_2010 PF02861 Clp amino terminal domain, pathogenicity island component Acav_2010 PF10431 C-terminal, D2-small domain, of ClpB protein Acav_2010 PF07724 AAA domain (Cdc48 subfamily) Acav_2010 PF17871 AAA lid domain Acav_2013 PF13406 Transglycosylase SLT domain Acav_2014 PF08411 Exonuclease C-terminal Acav_2014 PF00929 Exonuclease Acav_2015 PF02146 Sir2 family Acav_2016 PF02954 Bacterial regulatory protein, Fis family Acav_2016 PF01590 GAF domain Acav_2016 PF00158 Sigma-54 interaction domain Acav_2019 PF08240 Alcohol dehydrogenase GroES-like domain Acav_2019 PF00107 Zinc-binding dehydrogenase Acav_2020 PF00171 Aldehyde dehydrogenase family Acav_2021 PF00226 DnaJ domain Acav_2021 PF01556 DnaJ C terminal domain Acav_2021 PF00684 DnaJ central domain Acav_2030 PF07969 Amidohydrolase family Acav_2033 PF13302 Acetyltransferase (GNAT) domain Acav_2037 PF02608 ABC transporter substrate-binding protein PnrA-like Acav_2038 PF03412 Peptidase C39 family Acav_2038 PF00664 ABC transporter transmembrane region Acav_2038 PF00005 ABC transporter Acav_2044 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Acav_2044 PF06594 Haemolysin-type calcium binding protein related domain Acav_2047 PF06594 Haemolysin-type calcium binding protein related domain Acav_2047 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Acav_2049 PF00291 Pyridoxal-phosphate dependent enzyme Acav_2050 PF00378 Enoyl-CoA hydratase/isomerase Acav_2050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Acav_2050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Acav_2052 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2052 PF03466 LysR substrate binding domain Acav_2053 PF02798 Glutathione S-transferase, N-terminal domain Acav_2053 PF00043 Glutathione S-transferase, C-terminal domain Acav_2054 PF05872 Bacterial protein of unknown function (DUF853) Acav_2055 PF01709 Transcriptional regulator Acav_2056 PF02843 Phosphoribosylglycinamide synthetase, C domain Acav_2056 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Acav_2056 PF02844 Phosphoribosylglycinamide synthetase, N domain Acav_2057 PF01218 Coproporphyrinogen III oxidase Acav_2059 PF02590 Predicted SPOUT methyltransferase Acav_2061 PF02545 Maf-like protein Acav_2062 PF10150 Ribonuclease E/G family Acav_2062 PF00575 S1 RNA binding domain Acav_2072 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2072 PF00512 His Kinase A (phospho-acceptor) domain Acav_2072 PF07689 KaiB domain Acav_2073 PF12697 Alpha/beta hydrolase family Acav_2075 PF01494 FAD binding domain Acav_2076 PF00106 short chain dehydrogenase Acav_2078 PF00378 Enoyl-CoA hydratase/isomerase Acav_2079 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_2079 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_2079 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_2080 PF00501 AMP-binding enzyme Acav_2080 PF13193 AMP-binding enzyme C-terminal domain Acav_2081 PF13458 Periplasmic binding protein Acav_2082 PF02653 Branched-chain amino acid transport system / permease component Acav_2084 PF00005 ABC transporter Acav_2084 PF12399 Branched-chain amino acid ATP-binding cassette transporter Acav_2085 PF00005 ABC transporter Acav_2088 PF00155 Aminotransferase class I and II Acav_2089 PF03466 LysR substrate binding domain Acav_2089 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2093 PF02789 Cytosol aminopeptidase family, N-terminal domain Acav_2093 PF00883 Cytosol aminopeptidase family, catalytic domain Acav_2096 PF13458 Periplasmic binding protein Acav_2097 PF01810 LysE type translocator Acav_2098 PF00285 Citrate synthase, C-terminal domain Acav_2099 PF02515 CoA-transferase family III Acav_2100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Acav_2100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Acav_2100 PF01842 ACT domain Acav_2101 PF00501 AMP-binding enzyme Acav_2101 PF13193 AMP-binding enzyme C-terminal domain Acav_2102 PF07238 PilZ domain Acav_2104 PF00582 Universal stress protein family Acav_2105 PF05598 Transposase domain (DUF772) Acav_2105 PF01609 Transposase DDE domain Acav_2107 PF02705 K+ potassium transporter Acav_2108 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2109 PF00106 short chain dehydrogenase Acav_2110 PF00849 RNA pseudouridylate synthase Acav_2111 PF00072 Response regulator receiver domain Acav_2111 PF08448 PAS fold Acav_2111 PF00512 His Kinase A (phospho-acceptor) domain Acav_2111 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2111 PF13188 PAS domain Acav_2113 PF13411 MerR HTH family regulatory protein Acav_2113 PF07739 TipAS antibiotic-recognition domain Acav_2114 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Acav_2114 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Acav_2115 PF02347 Glycine cleavage system P-protein Acav_2116 PF01597 Glycine cleavage H-protein Acav_2117 PF01571 Aminomethyltransferase folate-binding domain Acav_2117 PF08669 Glycine cleavage T-protein C-terminal barrel domain Acav_2118 PF01037 Lrp/AsnC ligand binding domain Acav_2119 PF00005 ABC transporter Acav_2120 PF02653 Branched-chain amino acid transport system / permease component Acav_2123 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Acav_2123 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Acav_2125 PF12804 MobA-like NTP transferase domain Acav_2125 PF14602 Hexapeptide repeat of succinyl-transferase Acav_2125 PF00132 Bacterial transferase hexapeptide (six repeats) Acav_2126 PF00733 Asparagine synthase Acav_2126 PF13537 Glutamine amidotransferase domain Acav_2127 PF00171 Aldehyde dehydrogenase family Acav_2128 PF01925 Sulfite exporter TauE/SafE Acav_2135 PF00199 Catalase Acav_2135 PF06628 Catalase-related immune-responsive Acav_2140 PF07732 Multicopper oxidase Acav_2140 PF07731 Multicopper oxidase Acav_2142 PF02371 Transposase IS116/IS110/IS902 family Acav_2142 PF01548 Transposase Acav_2143 PF09339 IclR helix-turn-helix domain Acav_2143 PF01614 Bacterial transcriptional regulator Acav_2144 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2145 PF04909 Amidohydrolase Acav_2146 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2147 PF03737 Aldolase/RraA Acav_2148 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Acav_2148 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Acav_2149 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2150 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2151 PF04909 Amidohydrolase Acav_2153 PF00141 Peroxidase Acav_2155 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_2158 PF01144 Coenzyme A transferase Acav_2159 PF01144 Coenzyme A transferase Acav_2160 PF01584 CheW-like domain Acav_2162 PF00795 Carbon-nitrogen hydrolase Acav_2162 PF02540 NAD synthase Acav_2163 PF00543 Nitrogen regulatory protein P-II Acav_2164 PF03641 Possible lysine decarboxylase Acav_2165 PF01219 Prokaryotic diacylglycerol kinase Acav_2169 PF04542 Sigma-70 region 2 Acav_2169 PF08281 Sigma-70, region 4 Acav_2171 PF00205 Thiamine pyrophosphate enzyme, central domain Acav_2171 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Acav_2171 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Acav_2172 PF10369 Small subunit of acetolactate synthase Acav_2173 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Acav_2173 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Acav_2174 PF01066 CDP-alcohol phosphatidyltransferase Acav_2175 PF00682 HMGL-like Acav_2175 PF08502 LeuA allosteric (dimerisation) domain Acav_2176 PF00768 D-alanyl-D-alanine carboxypeptidase Acav_2177 PF01614 Bacterial transcriptional regulator Acav_2177 PF09339 IclR helix-turn-helix domain Acav_2178 PF04376 Arginine-tRNA-protein transferase, N terminus Acav_2178 PF04377 Arginine-tRNA-protein transferase, C terminus Acav_2179 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Acav_2180 PF04304 Protein of unknown function (DUF454) Acav_2181 PF01327 Polypeptide deformylase Acav_2182 PF01909 Nucleotidyltransferase domain Acav_2182 PF08335 GlnD PII-uridylyltransferase Acav_2182 PF01966 HD domain Acav_2183 PF00557 Metallopeptidase family M24 Acav_2184 PF02769 AIR synthase related protein, C-terminal domain Acav_2184 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Acav_2184 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Acav_2187 PF03707 Bacterial signalling protein N terminal repeat Acav_2187 PF00563 EAL domain Acav_2187 PF00990 Diguanylate cyclase, GGDEF domain Acav_2188 PF05661 Protein of unknown function (DUF808) Acav_2189 PF03922 OmpW family Acav_2190 PF01627 Hpt domain Acav_2190 PF00072 Response regulator receiver domain Acav_2190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Acav_2190 PF00672 HAMP domain Acav_2190 PF00512 His Kinase A (phospho-acceptor) domain Acav_2190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2192 PF10017 Histidine-specific methyltransferase, SAM-dependent Acav_2193 PF12867 DinB superfamily Acav_2193 PF03781 Sulfatase-modifying factor enzyme 1 Acav_2194 PF01053 Cys/Met metabolism PLP-dependent enzyme Acav_2197 PF01136 Peptidase family U32 Acav_2197 PF12392 Collagenase Acav_2199 PF13458 Periplasmic binding protein Acav_2201 PF14437 MafB19-like deaminase Acav_2202 PF17676 LD-carboxypeptidase C-terminal domain Acav_2202 PF02016 LD-carboxypeptidase N-terminal domain Acav_2203 PF16701 Adenylate cyclase regulatory domain Acav_2203 PF00211 Adenylate and Guanylate cyclase catalytic domain Acav_2204 PF01804 Penicillin amidase Acav_2205 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_2205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_2205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_2207 PF00027 Cyclic nucleotide-binding domain Acav_2207 PF13545 Crp-like helix-turn-helix domain Acav_2208 PF00378 Enoyl-CoA hydratase/isomerase Acav_2209 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Acav_2209 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Acav_2209 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain Acav_2211 PF02581 Thiamine monophosphate synthase Acav_2212 PF05690 Thiazole biosynthesis protein ThiG Acav_2214 PF01266 FAD dependent oxidoreductase Acav_2215 PF08543 Phosphomethylpyrimidine kinase Acav_2216 PF00069 Protein kinase domain Acav_2224 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_2225 PF11953 Domain of unknown function (DUF3470) Acav_2225 PF00037 4Fe-4S binding domain Acav_2226 PF00009 Elongation factor Tu GTP binding domain Acav_2227 PF01507 Phosphoadenosine phosphosulfate reductase family Acav_2229 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Acav_2229 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Acav_2230 PF01925 Sulfite exporter TauE/SafE Acav_2233 PF01266 FAD dependent oxidoreductase Acav_2233 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Acav_2234 PF04362 Bacterial Fe(2+) trafficking Acav_2236 PF03358 NADPH-dependent FMN reductase Acav_2237 PF09084 NMT1/THI5 like Acav_2239 PF00296 Luciferase-like monooxygenase Acav_2241 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2242 PF00005 ABC transporter Acav_2243 PF03459 TOBE domain Acav_2244 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2244 PF03466 LysR substrate binding domain Acav_2248 PF02272 DHHA1 domain Acav_2248 PF01411 tRNA synthetases class II (A) Acav_2248 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Acav_2249 PF00990 Diguanylate cyclase, GGDEF domain Acav_2249 PF17158 Membrane-associated sensor, integral membrane domain Acav_2250 PF02390 Putative methyltransferase Acav_2251 PF00749 tRNA synthetases class I (E and Q), catalytic domain Acav_2252 PF01593 Flavin containing amine oxidoreductase Acav_2253 PF03466 LysR substrate binding domain Acav_2253 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2254 PF02678 Pirin Acav_2254 PF17954 Quercetinase C-terminal cupin domain Acav_2255 PF03358 NADPH-dependent FMN reductase Acav_2256 PF02678 Pirin Acav_2256 PF05726 Pirin C-terminal cupin domain Acav_2258 PF10609 NUBPL iron-transfer P-loop NTPase Acav_2259 PF00072 Response regulator receiver domain Acav_2259 PF00990 Diguanylate cyclase, GGDEF domain Acav_2260 PF00916 Sulfate permease family Acav_2260 PF01740 STAS domain Acav_2262 PF01053 Cys/Met metabolism PLP-dependent enzyme Acav_2264 PF13472 GDSL-like Lipase/Acylhydrolase family Acav_2265 PF00005 ABC transporter Acav_2266 PF00588 SpoU rRNA Methylase family Acav_2266 PF08032 RNA 2'-O ribose methyltransferase substrate binding Acav_2267 PF02146 Sir2 family Acav_2268 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Acav_2269 PF00248 Aldo/keto reductase family Acav_2271 PF02417 Chromate transporter Acav_2272 PF01321 Creatinase/Prolidase N-terminal domain Acav_2272 PF00557 Metallopeptidase family M24 Acav_2273 PF02789 Cytosol aminopeptidase family, N-terminal domain Acav_2273 PF00883 Cytosol aminopeptidase family, catalytic domain Acav_2275 PF02472 Biopolymer transport protein ExbD/TolR Acav_2276 PF01618 MotA/TolQ/ExbB proton channel family Acav_2279 PF00326 Prolyl oligopeptidase family Acav_2280 PF00085 Thioredoxin Acav_2281 PF06472 ABC transporter transmembrane region 2 Acav_2281 PF00005 ABC transporter Acav_2282 PF00593 TonB dependent receptor Acav_2282 PF07715 TonB-dependent Receptor Plug Domain Acav_2283 PF00392 Bacterial regulatory proteins, gntR family Acav_2283 PF00155 Aminotransferase class I and II Acav_2284 PF00512 His Kinase A (phospho-acceptor) domain Acav_2284 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2284 PF08521 Two-component sensor kinase N-terminal Acav_2285 PF00486 Transcriptional regulatory protein, C terminal Acav_2285 PF00072 Response regulator receiver domain Acav_2286 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2288 PF01970 Tripartite tricarboxylate transporter TctA family Acav_2290 PF07715 TonB-dependent Receptor Plug Domain Acav_2290 PF00593 TonB dependent receptor Acav_2292 PF10605 3HB-oligomer hydrolase (3HBOH) Acav_2295 PF00072 Response regulator receiver domain Acav_2295 PF00486 Transcriptional regulatory protein, C terminal Acav_2296 PF16736 Single Cache-like Acav_2296 PF00989 PAS fold Acav_2296 PF00512 His Kinase A (phospho-acceptor) domain Acav_2296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2297 PF00762 Ferrochelatase Acav_2298 PF13419 Haloacid dehalogenase-like hydrolase Acav_2299 PF08386 TAP-like protein Acav_2299 PF00561 alpha/beta hydrolase fold Acav_2300 PF01053 Cys/Met metabolism PLP-dependent enzyme Acav_2301 PF00005 ABC transporter Acav_2301 PF00571 CBS domain Acav_2302 PF01264 Chorismate synthase Acav_2304 PF03477 ATP cone domain Acav_2305 PF00464 Serine hydroxymethyltransferase Acav_2306 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Acav_2306 PF01464 Transglycosylase SLT domain Acav_2309 PF08206 Ribonuclease B OB domain Acav_2309 PF00773 RNB domain Acav_2309 PF17876 Cold shock domain Acav_2309 PF08461 Ribonuclease R winged-helix domain Acav_2309 PF00575 S1 RNA binding domain Acav_2312 PF00534 Glycosyl transferases group 1 Acav_2312 PF08323 Starch synthase catalytic domain Acav_2313 PF00128 Alpha amylase, catalytic domain Acav_2314 PF00128 Alpha amylase, catalytic domain Acav_2314 PF11941 Domain of unknown function (DUF3459) Acav_2315 PF00128 Alpha amylase, catalytic domain Acav_2315 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Acav_2316 PF00483 Nucleotidyl transferase Acav_2317 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2317 PF00512 His Kinase A (phospho-acceptor) domain Acav_2317 PF00072 Response regulator receiver domain Acav_2317 PF09308 LuxQ, periplasmic Acav_2318 PF01590 GAF domain Acav_2318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2318 PF00512 His Kinase A (phospho-acceptor) domain Acav_2318 PF08446 PAS fold Acav_2318 PF00360 Phytochrome region Acav_2320 PF00512 His Kinase A (phospho-acceptor) domain Acav_2320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2320 PF00072 Response regulator receiver domain Acav_2320 PF13188 PAS domain Acav_2320 PF08448 PAS fold Acav_2321 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2321 PF00512 His Kinase A (phospho-acceptor) domain Acav_2322 PF00512 His Kinase A (phospho-acceptor) domain Acav_2322 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2324 PF13581 Histidine kinase-like ATPase domain Acav_2325 PF01740 STAS domain Acav_2326 PF01740 STAS domain Acav_2326 PF08678 Rsbr N terminal Acav_2328 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2329 PF00005 ABC transporter Acav_2330 PF07702 UTRA domain Acav_2330 PF00392 Bacterial regulatory proteins, gntR family Acav_2331 PF00221 Aromatic amino acid lyase Acav_2332 PF17392 Urocanase C-terminal domain Acav_2332 PF17391 Urocanase N-terminal domain Acav_2332 PF01175 Urocanase Rossmann-like domain Acav_2335 PF01979 Amidohydrolase family Acav_2338 PF00892 EamA-like transporter family Acav_2339 PF12951 Passenger-associated-transport-repeat Acav_2341 PF02666 Phosphatidylserine decarboxylase Acav_2342 PF01176 Translation initiation factor 1A / IF-1 Acav_2347 PF04279 Intracellular septation protein A Acav_2348 PF01641 SelR domain Acav_2349 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Acav_2350 PF00501 AMP-binding enzyme Acav_2350 PF13193 AMP-binding enzyme C-terminal domain Acav_2352 PF02653 Branched-chain amino acid transport system / permease component Acav_2354 PF12399 Branched-chain amino acid ATP-binding cassette transporter Acav_2354 PF00005 ABC transporter Acav_2355 PF00005 ABC transporter Acav_2359 PF00990 Diguanylate cyclase, GGDEF domain Acav_2359 PF17158 Membrane-associated sensor, integral membrane domain Acav_2360 PF03707 Bacterial signalling protein N terminal repeat Acav_2360 PF00990 Diguanylate cyclase, GGDEF domain Acav_2360 PF00563 EAL domain Acav_2362 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Acav_2362 PF00378 Enoyl-CoA hydratase/isomerase Acav_2362 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Acav_2363 PF02803 Thiolase, C-terminal domain Acav_2363 PF00108 Thiolase, N-terminal domain Acav_2364 PF03061 Thioesterase superfamily Acav_2365 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_2365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_2365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_2365 PF12806 Acetyl-CoA dehydrogenase C-terminal like Acav_2368 PF16884 N-terminal domain of oxidoreductase Acav_2368 PF00107 Zinc-binding dehydrogenase Acav_2369 PF13673 Acetyltransferase (GNAT) domain Acav_2371 PF00106 short chain dehydrogenase Acav_2372 PF00106 short chain dehydrogenase Acav_2373 PF13416 Bacterial extracellular solute-binding protein Acav_2375 PF00892 EamA-like transporter family Acav_2376 PF01037 Lrp/AsnC ligand binding domain Acav_2379 PF00463 Isocitrate lyase family Acav_2380 PF02824 TGS domain Acav_2380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Acav_2380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Acav_2380 PF03129 Anticodon binding domain Acav_2381 PF00707 Translation initiation factor IF-3, C-terminal domain Acav_2381 PF05198 Translation initiation factor IF-3, N-terminal domain Acav_2382 PF01632 Ribosomal protein L35 Acav_2383 PF00453 Ribosomal protein L20 Acav_2384 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Acav_2384 PF01409 tRNA synthetases class II core domain (F) Acav_2385 PF03484 tRNA synthetase B5 domain Acav_2385 PF03147 Ferredoxin-fold anticodon binding domain Acav_2385 PF03483 B3/4 domain Acav_2385 PF01588 Putative tRNA binding domain Acav_2385 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Acav_2386 PF00216 Bacterial DNA-binding protein Acav_2387 PF13411 MerR HTH family regulatory protein Acav_2390 PF14602 Hexapeptide repeat of succinyl-transferase Acav_2390 PF12464 Maltose acetyltransferase Acav_2391 PF00005 ABC transporter Acav_2391 PF00664 ABC transporter transmembrane region Acav_2392 PF02040 Arsenical pump membrane protein Acav_2393 PF00563 EAL domain Acav_2393 PF00990 Diguanylate cyclase, GGDEF domain Acav_2393 PF03707 Bacterial signalling protein N terminal repeat Acav_2394 PF02694 Uncharacterised BCR, YnfA/UPF0060 family Acav_2396 PF02463 RecF/RecN/SMC N terminal domain Acav_2396 PF06470 SMC proteins Flexible Hinge Domain Acav_2398 PF00533 BRCA1 C Terminus (BRCT) domain Acav_2398 PF01653 NAD-dependent DNA ligase adenylation domain Acav_2398 PF12826 Helix-hairpin-helix motif Acav_2398 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Acav_2398 PF03120 NAD-dependent DNA ligase OB-fold domain Acav_2399 PF04717 Type VI secretion system, phage-baseplate injector Acav_2401 PF05593 RHS Repeat Acav_2401 PF03527 RHS protein Acav_2408 PF00271 Helicase conserved C-terminal domain Acav_2408 PF00176 SNF2 family N-terminal domain Acav_2408 PF04434 SWIM zinc finger Acav_2411 PF00877 NlpC/P60 family Acav_2412 PF07995 Glucose / Sorbosone dehydrogenase Acav_2414 PF16177 Acetyl-coenzyme A synthetase N-terminus Acav_2414 PF13193 AMP-binding enzyme C-terminal domain Acav_2414 PF00501 AMP-binding enzyme Acav_2415 PF13193 AMP-binding enzyme C-terminal domain Acav_2415 PF00501 AMP-binding enzyme Acav_2417 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Acav_2417 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_2419 PF03707 Bacterial signalling protein N terminal repeat Acav_2419 PF00990 Diguanylate cyclase, GGDEF domain Acav_2419 PF00563 EAL domain Acav_2421 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Acav_2421 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Acav_2422 PF02805 Metal binding domain of Ada Acav_2422 PF12833 Helix-turn-helix domain Acav_2423 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Acav_2423 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Acav_2423 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Acav_2423 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Acav_2425 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Acav_2425 PF00534 Glycosyl transferases group 1 Acav_2427 PF00501 AMP-binding enzyme Acav_2427 PF13193 AMP-binding enzyme C-terminal domain Acav_2429 PF07683 Cobalamin synthesis protein cobW C-terminal domain Acav_2429 PF02492 CobW/HypB/UreG, nucleotide-binding domain Acav_2430 PF02211 Nitrile hydratase beta subunit Acav_2431 PF02979 Nitrile hydratase, alpha chain Acav_2432 PF01425 Amidase Acav_2433 PF12833 Helix-turn-helix domain Acav_2433 PF14525 AraC-binding-like domain Acav_2434 PF00583 Acetyltransferase (GNAT) family Acav_2434 PF13380 CoA binding domain Acav_2434 PF13607 Succinyl-CoA ligase like flavodoxin domain Acav_2436 PF02321 Outer membrane efflux protein Acav_2439 PF17922 Tetracyclin repressor-like, C-terminal domain Acav_2439 PF00440 Bacterial regulatory proteins, tetR family Acav_2440 PF01625 Peptide methionine sulfoxide reductase Acav_2442 PF02687 FtsX-like permease family Acav_2442 PF00005 ABC transporter Acav_2442 PF12704 MacB-like periplasmic core domain Acav_2447 PF00593 TonB dependent receptor Acav_2447 PF07715 TonB-dependent Receptor Plug Domain Acav_2448 PF01266 FAD dependent oxidoreductase Acav_2450 PF01266 FAD dependent oxidoreductase Acav_2451 PF00171 Aldehyde dehydrogenase family Acav_2452 PF13180 PDZ domain Acav_2452 PF03572 Peptidase family S41 Acav_2455 PF01243 Pyridoxamine 5'-phosphate oxidase Acav_2455 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Acav_2462 PF00356 Bacterial regulatory proteins, lacI family Acav_2464 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Acav_2465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Acav_2466 PF03480 Bacterial extracellular solute-binding protein, family 7 Acav_2467 PF00920 Dehydratase family Acav_2468 PF01081 KDPG and KHG aldolase Acav_2470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Acav_2472 PF01381 Helix-turn-helix Acav_2472 PF06114 IrrE N-terminal-like domain Acav_2472 PF09856 Predicted transcriptional regulator (DUF2083) Acav_2473 PF00285 Citrate synthase, C-terminal domain Acav_2474 PF00694 Aconitase C-terminal domain Acav_2474 PF00330 Aconitase family (aconitate hydratase) Acav_2475 PF04303 PrpF protein Acav_2477 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2477 PF03466 LysR substrate binding domain Acav_2479 PF01717 Cobalamin-independent synthase, Catalytic domain Acav_2479 PF08267 Cobalamin-independent synthase, N-terminal domain Acav_2488 PF13609 Gram-negative porin Acav_2489 PF00561 alpha/beta hydrolase fold Acav_2490 PF00795 Carbon-nitrogen hydrolase Acav_2491 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2492 PF12911 N-terminal TM domain of oligopeptide transport permease C Acav_2492 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2493 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Acav_2494 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Acav_2494 PF00005 ABC transporter Acav_2495 PF03737 Aldolase/RraA Acav_2496 PF03328 HpcH/HpaI aldolase/citrate lyase family Acav_2500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2500 PF03466 LysR substrate binding domain Acav_2501 PF03328 HpcH/HpaI aldolase/citrate lyase family Acav_2502 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2503 PF02515 CoA-transferase family III Acav_2504 PF04909 Amidohydrolase Acav_2505 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2508 PF00550 Phosphopantetheine attachment site Acav_2509 PF00501 AMP-binding enzyme Acav_2509 PF13193 AMP-binding enzyme C-terminal domain Acav_2510 PF11182 Alginate O-acetyl transferase AlgF Acav_2511 PF03062 MBOAT, membrane-bound O-acyltransferase family Acav_2513 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX Acav_2515 PF13632 Glycosyl transferase family group 2 Acav_2515 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Acav_2517 PF02350 UDP-N-acetylglucosamine 2-epimerase Acav_2520 PF00849 RNA pseudouridylate synthase Acav_2521 PF05170 AsmA family Acav_2522 PF02811 PHP domain Acav_2522 PF14579 Helix-hairpin-helix motif Acav_2522 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Acav_2522 PF07733 Bacterial DNA polymerase III alpha NTPase domain Acav_2526 PF00719 Inorganic pyrophosphatase Acav_2527 PF12833 Helix-turn-helix domain Acav_2527 PF02311 AraC-like ligand binding domain Acav_2530 PF02655 ATP-grasp domain Acav_2530 PF00206 Lyase Acav_2531 PF00291 Pyridoxal-phosphate dependent enzyme Acav_2533 PF03030 Inorganic H+ pyrophosphatase Acav_2537 PF00171 Aldehyde dehydrogenase family Acav_2538 PF02535 ZIP Zinc transporter Acav_2539 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Acav_2539 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Acav_2540 PF02447 GntP family permease Acav_2541 PF17990 L-Lysine epsilon oxidase N-terminal Acav_2541 PF18417 L-lysine epsilon oxidase C-terminal domain Acav_2542 PF01494 FAD binding domain Acav_2545 PF06463 Molybdenum Cofactor Synthesis C Acav_2545 PF04055 Radical SAM superfamily Acav_2546 PF12804 MobA-like NTP transferase domain Acav_2548 PF03453 MoeA N-terminal region (domain I and II) Acav_2548 PF03454 MoeA C-terminal region (domain IV) Acav_2548 PF00994 Probable molybdopterin binding domain Acav_2550 PF00075 RNase H Acav_2552 PF00753 Metallo-beta-lactamase superfamily Acav_2552 PF16123 Hydroxyacylglutathione hydrolase C-terminus Acav_2553 PF01476 LysM domain Acav_2553 PF01464 Transglycosylase SLT domain Acav_2557 PF13662 Toprim domain Acav_2557 PF02132 RecR protein Acav_2558 PF02575 YbaB/EbfC DNA-binding family Acav_2559 PF12170 DNA polymerase III tau subunit V interacting with alpha Acav_2559 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Acav_2559 PF12169 DNA polymerase III subunits gamma and tau domain III Acav_2560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_2560 PF00672 HAMP domain Acav_2560 PF17200 Single Cache domain 2 Acav_2562 PF13361 UvrD-like helicase C-terminal domain Acav_2562 PF00580 UvrD/REP helicase N-terminal domain Acav_2562 PF12705 PD-(D/E)XK nuclease superfamily Acav_2564 PF00085 Thioredoxin Acav_2565 PF07497 Rho termination factor, RNA-binding domain Acav_2565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Acav_2565 PF07498 Rho termination factor, N-terminal domain Acav_2566 PF13476 AAA domain Acav_2567 PF12320 Type 5 capsule protein repressor C-terminal domain Acav_2567 PF00149 Calcineurin-like phosphoesterase Acav_2568 PF01197 Ribosomal protein L31 Acav_2570 PF01554 MatE Acav_2571 PF11808 Phosphate regulon sensor protein PhoR Acav_2571 PF00989 PAS fold Acav_2571 PF00512 His Kinase A (phospho-acceptor) domain Acav_2571 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2572 PF00072 Response regulator receiver domain Acav_2572 PF00486 Transcriptional regulatory protein, C terminal Acav_2573 PF01895 PhoU domain Acav_2574 PF00005 ABC transporter Acav_2575 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2576 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2577 PF12849 PBP superfamily domain Acav_2578 PF02541 Ppx/GppA phosphatase family Acav_2580 PF00300 Histidine phosphatase superfamily (branch 1) Acav_2581 PF13089 Polyphosphate kinase N-terminal domain Acav_2581 PF17941 Polyphosphate kinase C-terminal domain 1 Acav_2581 PF13090 Polyphosphate kinase C-terminal domain 2 Acav_2581 PF02503 Polyphosphate kinase middle domain Acav_2583 PF00563 EAL domain Acav_2583 PF03707 Bacterial signalling protein N terminal repeat Acav_2583 PF00990 Diguanylate cyclase, GGDEF domain Acav_2584 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Acav_2584 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Acav_2584 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Acav_2584 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Acav_2585 PF00809 Pterin binding enzyme Acav_2586 PF00004 ATPase family associated with various cellular activities (AAA) Acav_2586 PF17862 AAA+ lid domain Acav_2586 PF06480 FtsH Extracellular Acav_2586 PF01434 Peptidase family M41 Acav_2587 PF01728 FtsJ-like methyltransferase Acav_2588 PF01985 CRS1 / YhbY (CRM) domain Acav_2591 PF03449 Transcription elongation factor, N-terminal Acav_2591 PF01272 Transcription elongation factor, GreA/GreB, C-term Acav_2592 PF02142 MGS-like domain Acav_2592 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Acav_2592 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Acav_2593 PF00117 Glutamine amidotransferase class-I Acav_2593 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Acav_2595 PF00324 Amino acid permease Acav_2598 PF02371 Transposase IS116/IS110/IS902 family Acav_2598 PF01548 Transposase Acav_2599 PF00171 Aldehyde dehydrogenase family Acav_2601 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_2601 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_2601 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_2603 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Acav_2603 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Acav_2604 PF00080 Copper/zinc superoxide dismutase (SODC) Acav_2605 PF07715 TonB-dependent Receptor Plug Domain Acav_2605 PF00593 TonB dependent receptor Acav_2606 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2608 PF08666 SAF domain Acav_2608 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Acav_2609 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Acav_2611 PF03480 Bacterial extracellular solute-binding protein, family 7 Acav_2613 PF01370 NAD dependent epimerase/dehydratase family Acav_2615 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2616 PF00701 Dihydrodipicolinate synthetase family Acav_2620 PF00082 Subtilase family Acav_2623 PF07690 Major Facilitator Superfamily Acav_2625 PF00672 HAMP domain Acav_2625 PF02203 Tar ligand binding domain homologue Acav_2625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_2628 PF00884 Sulfatase Acav_2628 PF08019 Phosphoethanolamine transferase EptA/EptB Acav_2630 PF11808 Phosphate regulon sensor protein PhoR Acav_2630 PF00989 PAS fold Acav_2630 PF00512 His Kinase A (phospho-acceptor) domain Acav_2630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2631 PF00072 Response regulator receiver domain Acav_2631 PF00486 Transcriptional regulatory protein, C terminal Acav_2637 PF00180 Isocitrate/isopropylmalate dehydrogenase Acav_2640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Acav_2640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Acav_2641 PF02601 Exonuclease VII, large subunit Acav_2641 PF13742 OB-fold nucleic acid binding domain Acav_2642 PF01618 MotA/TolQ/ExbB proton channel family Acav_2643 PF02472 Biopolymer transport protein ExbD/TolR Acav_2644 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Acav_2645 PF03966 Trm112p-like protein Acav_2646 PF02348 Cytidylyltransferase Acav_2647 PF05191 Adenylate kinase, active site lid Acav_2648 PF00710 Asparaginase, N-terminal Acav_2648 PF17763 Glutaminase/Asparaginase C-terminal domain Acav_2649 PF00717 Peptidase S24-like Acav_2649 PF01726 LexA DNA binding domain Acav_2651 PF00270 DEAD/DEAH box helicase Acav_2651 PF00271 Helicase conserved C-terminal domain Acav_2651 PF04408 Helicase associated domain (HA2) Acav_2651 PF11898 Domain of unknown function (DUF3418) Acav_2651 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Acav_2653 PF01266 FAD dependent oxidoreductase Acav_2654 PF00696 Amino acid kinase family Acav_2654 PF00583 Acetyltransferase (GNAT) family Acav_2656 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2656 PF03466 LysR substrate binding domain Acav_2658 PF02600 Disulfide bond formation protein DsbB Acav_2659 PF00005 ABC transporter Acav_2659 PF12857 TOBE-like domain Acav_2659 PF17850 CysA C-terminal regulatory domain Acav_2660 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2661 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2665 PF03466 LysR substrate binding domain Acav_2665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2666 PF02525 Flavodoxin-like fold Acav_2667 PF03358 NADPH-dependent FMN reductase Acav_2668 PF03180 NLPA lipoprotein Acav_2669 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_2669 PF02203 Tar ligand binding domain homologue Acav_2669 PF00672 HAMP domain Acav_2672 PF12833 Helix-turn-helix domain Acav_2673 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2674 PF00005 ABC transporter Acav_2674 PF09383 NIL domain Acav_2675 PF00512 His Kinase A (phospho-acceptor) domain Acav_2675 PF13188 PAS domain Acav_2675 PF00072 Response regulator receiver domain Acav_2675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2675 PF08448 PAS fold Acav_2676 PF07690 Major Facilitator Superfamily Acav_2677 PF03466 LysR substrate binding domain Acav_2677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2681 PF02321 Outer membrane efflux protein Acav_2682 PF00873 AcrB/AcrD/AcrF family Acav_2683 PF00529 HlyD membrane-fusion protein of T1SS Acav_2683 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Acav_2684 PF00486 Transcriptional regulatory protein, C terminal Acav_2684 PF00072 Response regulator receiver domain Acav_2685 PF00989 PAS fold Acav_2685 PF18698 Histidine kinase sensor domain Acav_2685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2685 PF00512 His Kinase A (phospho-acceptor) domain Acav_2685 PF00672 HAMP domain Acav_2687 PF03466 LysR substrate binding domain Acav_2687 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2692 PF02735 Ku70/Ku80 beta-barrel domain Acav_2693 PF01068 ATP dependent DNA ligase domain Acav_2693 PF04679 ATP dependent DNA ligase C terminal region Acav_2693 PF13298 DNA polymerase Ligase (LigD) Acav_2694 PF04055 Radical SAM superfamily Acav_2694 PF06968 Biotin and Thiamin Synthesis associated domain Acav_2697 PF00202 Aminotransferase class-III Acav_2698 PF01418 Helix-turn-helix domain, rpiR family Acav_2698 PF01380 SIS domain Acav_2701 PF02785 Biotin carboxylase C-terminal domain Acav_2701 PF00289 Biotin carboxylase, N-terminal domain Acav_2701 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Acav_2704 PF00364 Biotin-requiring enzyme Acav_2704 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Acav_2704 PF00289 Biotin carboxylase, N-terminal domain Acav_2704 PF02785 Biotin carboxylase C-terminal domain Acav_2706 PF01039 Carboxyl transferase domain Acav_2710 PF00392 Bacterial regulatory proteins, gntR family Acav_2710 PF07729 FCD domain Acav_2711 PF03707 Bacterial signalling protein N terminal repeat Acav_2711 PF00990 Diguanylate cyclase, GGDEF domain Acav_2711 PF00563 EAL domain Acav_2712 PF00873 AcrB/AcrD/AcrF family Acav_2713 PF00529 HlyD membrane-fusion protein of T1SS Acav_2713 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Acav_2714 PF02321 Outer membrane efflux protein Acav_2719 PF00072 Response regulator receiver domain Acav_2719 PF00196 Bacterial regulatory proteins, luxR family Acav_2720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_2720 PF00672 HAMP domain Acav_2720 PF02203 Tar ligand binding domain homologue Acav_2721 PF01207 Dihydrouridine synthase (Dus) Acav_2722 PF00563 EAL domain Acav_2722 PF00990 Diguanylate cyclase, GGDEF domain Acav_2722 PF03707 Bacterial signalling protein N terminal repeat Acav_2725 PF04060 Putative Fe-S cluster Acav_2726 PF02203 Tar ligand binding domain homologue Acav_2726 PF00672 HAMP domain Acav_2726 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_2727 PF00155 Aminotransferase class I and II Acav_2728 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Acav_2728 PF14602 Hexapeptide repeat of succinyl-transferase Acav_2729 PF00437 Type II/IV secretion system protein Acav_2730 PF01546 Peptidase family M20/M25/M40 Acav_2730 PF07687 Peptidase dimerisation domain Acav_2731 PF05175 Methyltransferase small domain Acav_2733 PF00106 short chain dehydrogenase Acav_2734 PF00108 Thiolase, N-terminal domain Acav_2734 PF02803 Thiolase, C-terminal domain Acav_2735 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Acav_2738 PF13417 Glutathione S-transferase, N-terminal domain Acav_2739 PF01557 Fumarylacetoacetate (FAA) hydrolase family Acav_2741 PF00069 Protein kinase domain Acav_2744 PF00497 Bacterial extracellular solute-binding proteins, family 3 Acav_2745 PF00912 Transglycosylase Acav_2745 PF00905 Penicillin binding protein transpeptidase domain Acav_2747 PF10672 S-adenosylmethionine-dependent methyltransferase Acav_2747 PF17785 PUA-like domain Acav_2750 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2751 PF01757 Acyltransferase family Acav_2752 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Acav_2752 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_2753 PF00364 Biotin-requiring enzyme Acav_2753 PF02817 e3 binding domain Acav_2753 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Acav_2754 PF00456 Transketolase, thiamine diphosphate binding domain Acav_2754 PF17831 Pyruvate dehydrogenase E1 component middle domain Acav_2755 PF00512 His Kinase A (phospho-acceptor) domain Acav_2755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2755 PF00989 PAS fold Acav_2756 PF00196 Bacterial regulatory proteins, luxR family Acav_2756 PF00072 Response regulator receiver domain Acav_2757 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Acav_2757 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Acav_2758 PF01432 Peptidase family M3 Acav_2760 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Acav_2761 PF01180 Dihydroorotate dehydrogenase Acav_2765 PF01266 FAD dependent oxidoreductase Acav_2766 PF00850 Histone deacetylase domain Acav_2767 PF00929 Exonuclease Acav_2768 PF00111 2Fe-2S iron-sulfur cluster binding domain Acav_2769 PF00012 Hsp70 protein Acav_2770 PF07743 HSCB C-terminal oligomerisation domain Acav_2771 PF01521 Iron-sulphur cluster biosynthesis Acav_2772 PF01592 NifU-like N terminal domain Acav_2773 PF00266 Aminotransferase class-V Acav_2774 PF02082 Transcriptional regulator Acav_2776 PF00155 Aminotransferase class I and II Acav_2777 PF02515 CoA-transferase family III Acav_2779 PF11842 Domain of unknown function (DUF3362) Acav_2779 PF04055 Radical SAM superfamily Acav_2779 PF08497 Radical SAM N-terminal Acav_2780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_2780 PF00672 HAMP domain Acav_2781 PF00127 Copper binding proteins, plastocyanin/azurin family Acav_2782 PF01205 Uncharacterized protein family UPF0029 Acav_2782 PF09186 Domain of unknown function (DUF1949) Acav_2783 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Acav_2783 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_2785 PF01266 FAD dependent oxidoreductase Acav_2786 PF01425 Amidase Acav_2787 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2788 PF00291 Pyridoxal-phosphate dependent enzyme Acav_2789 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2789 PF03466 LysR substrate binding domain Acav_2791 PF07995 Glucose / Sorbosone dehydrogenase Acav_2792 PF01479 S4 domain Acav_2794 PF01739 CheR methyltransferase, SAM binding domain Acav_2794 PF03705 CheR methyltransferase, all-alpha domain Acav_2794 PF01339 CheB methylesterase Acav_2794 PF08448 PAS fold Acav_2799 PF02525 Flavodoxin-like fold Acav_2800 PF03466 LysR substrate binding domain Acav_2800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2806 PF13840 ACT domain Acav_2806 PF01842 ACT domain Acav_2806 PF00696 Amino acid kinase family Acav_2807 PF01171 PP-loop family Acav_2807 PF09179 TilS substrate binding domain Acav_2808 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Acav_2809 PF02805 Metal binding domain of Ada Acav_2809 PF06029 AlkA N-terminal domain Acav_2809 PF12833 Helix-turn-helix domain Acav_2809 PF00730 HhH-GPD superfamily base excision DNA repair protein Acav_2810 PF09190 DALR domain Acav_2810 PF01406 tRNA synthetases class I (C) catalytic domain Acav_2813 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Acav_2814 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Acav_2815 PF00149 Calcineurin-like phosphoesterase Acav_2816 PF06167 Glucose-regulated metallo-peptidase M90 Acav_2818 PF00563 EAL domain Acav_2818 PF03707 Bacterial signalling protein N terminal repeat Acav_2818 PF00990 Diguanylate cyclase, GGDEF domain Acav_2819 PF13689 YfiR/HmsC-like Acav_2821 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2822 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2822 PF03466 LysR substrate binding domain Acav_2823 PF00456 Transketolase, thiamine diphosphate binding domain Acav_2823 PF17831 Pyruvate dehydrogenase E1 component middle domain Acav_2824 PF01037 Lrp/AsnC ligand binding domain Acav_2828 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Acav_2829 PF00472 RF-1 domain Acav_2831 PF01220 Dehydroquinase class II Acav_2833 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Acav_2833 PF00749 tRNA synthetases class I (E and Q), catalytic domain Acav_2834 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Acav_2836 PF00497 Bacterial extracellular solute-binding proteins, family 3 Acav_2837 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2838 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2839 PF00005 ABC transporter Acav_2841 PF01053 Cys/Met metabolism PLP-dependent enzyme Acav_2845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2845 PF03466 LysR substrate binding domain Acav_2847 PF03401 Tripartite tricarboxylate transporter family receptor Acav_2853 PF13396 Phospholipase_D-nuclease N-terminal Acav_2853 PF13091 PLD-like domain Acav_2855 PF00849 RNA pseudouridylate synthase Acav_2859 PF00672 HAMP domain Acav_2859 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_2859 PF02203 Tar ligand binding domain homologue Acav_2860 PF01547 Bacterial extracellular solute-binding protein Acav_2865 PF00849 RNA pseudouridylate synthase Acav_2866 PF02308 MgtC family Acav_2867 PF09278 MerR, DNA binding Acav_2867 PF00376 MerR family regulatory protein Acav_2869 PF07690 Major Facilitator Superfamily Acav_2872 PF00267 Gram-negative porin Acav_2873 PF01926 50S ribosome-binding GTPase Acav_2875 PF00512 His Kinase A (phospho-acceptor) domain Acav_2875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2876 PF01810 LysE type translocator Acav_2877 PF00205 Thiamine pyrophosphate enzyme, central domain Acav_2877 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Acav_2877 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Acav_2878 PF04262 Glutamate-cysteine ligase Acav_2881 PF08450 SMP-30/Gluconolactonase/LRE-like region Acav_2883 PF03466 LysR substrate binding domain Acav_2883 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2884 PF00171 Aldehyde dehydrogenase family Acav_2885 PF13407 Periplasmic binding protein domain Acav_2886 PF13407 Periplasmic binding protein domain Acav_2887 PF00005 ABC transporter Acav_2888 PF02653 Branched-chain amino acid transport system / permease component Acav_2889 PF00005 ABC transporter Acav_2890 PF02653 Branched-chain amino acid transport system / permease component Acav_2891 PF02653 Branched-chain amino acid transport system / permease component Acav_2892 PF00920 Dehydratase family Acav_2893 PF00701 Dihydrodipicolinate synthetase family Acav_2894 PF05035 2-keto-3-deoxy-galactonokinase Acav_2895 PF01081 KDPG and KHG aldolase Acav_2896 PF13378 Enolase C-terminal domain-like Acav_2896 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Acav_2897 PF12805 FUSC-like inner membrane protein yccS Acav_2899 PF02203 Tar ligand binding domain homologue Acav_2899 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_2899 PF00672 HAMP domain Acav_2901 PF01339 CheB methylesterase Acav_2901 PF00072 Response regulator receiver domain Acav_2902 PF00486 Transcriptional regulatory protein, C terminal Acav_2902 PF00072 Response regulator receiver domain Acav_2904 PF00989 PAS fold Acav_2904 PF00512 His Kinase A (phospho-acceptor) domain Acav_2904 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2906 PF00111 2Fe-2S iron-sulfur cluster binding domain Acav_2908 PF00925 GTP cyclohydrolase II Acav_2908 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Acav_2909 PF00885 6,7-dimethyl-8-ribityllumazine synthase Acav_2910 PF01029 NusB family Acav_2911 PF00155 Aminotransferase class I and II Acav_2912 PF03061 Thioesterase superfamily Acav_2913 PF01618 MotA/TolQ/ExbB proton channel family Acav_2914 PF02472 Biopolymer transport protein ExbD/TolR Acav_2916 PF03150 Di-haem cytochrome c peroxidase Acav_2918 PF07690 Major Facilitator Superfamily Acav_2918 PF00083 Sugar (and other) transporter Acav_2919 PF06481 COX Aromatic Rich Motif Acav_2919 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Acav_2920 PF00115 Cytochrome C and Quinol oxidase polypeptide I Acav_2921 PF00510 Cytochrome c oxidase subunit III Acav_2922 PF03626 Prokaryotic Cytochrome C oxidase subunit IV Acav_2924 PF00989 PAS fold Acav_2924 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_2925 PF02954 Bacterial regulatory protein, Fis family Acav_2925 PF00072 Response regulator receiver domain Acav_2927 PF03466 LysR substrate binding domain Acav_2927 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2931 PF05992 SbmA/BacA-like family Acav_2932 PF06434 Aconitate hydratase 2 N-terminus Acav_2932 PF11791 Aconitate B N-terminal domain Acav_2932 PF00330 Aconitase family (aconitate hydratase) Acav_2935 PF13649 Methyltransferase domain Acav_2936 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Acav_2936 PF00056 lactate/malate dehydrogenase, NAD binding domain Acav_2937 PF00392 Bacterial regulatory proteins, gntR family Acav_2937 PF07702 UTRA domain Acav_2940 PF02910 Fumarate reductase flavoprotein C-term Acav_2940 PF00890 FAD binding domain Acav_2941 PF13085 2Fe-2S iron-sulfur cluster binding domain Acav_2942 PF03937 Flavinator of succinate dehydrogenase Acav_2943 PF00285 Citrate synthase, C-terminal domain Acav_2945 PF13302 Acetyltransferase (GNAT) domain Acav_2946 PF01965 DJ-1/PfpI family Acav_2946 PF12833 Helix-turn-helix domain Acav_2947 PF08240 Alcohol dehydrogenase GroES-like domain Acav_2947 PF00107 Zinc-binding dehydrogenase Acav_2948 PF00756 Putative esterase Acav_2949 PF00884 Sulfatase Acav_2949 PF08019 Phosphoethanolamine transferase EptA/EptB Acav_2950 PF03466 LysR substrate binding domain Acav_2950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_2951 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_2951 PF02203 Tar ligand binding domain homologue Acav_2951 PF00672 HAMP domain Acav_2952 PF00171 Aldehyde dehydrogenase family Acav_2953 PF00180 Isocitrate/isopropylmalate dehydrogenase Acav_2954 PF00005 ABC transporter Acav_2954 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Acav_2955 PF12911 N-terminal TM domain of oligopeptide transport permease C Acav_2955 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2956 PF00528 Binding-protein-dependent transport system inner membrane component Acav_2958 PF01266 FAD dependent oxidoreductase Acav_2961 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Acav_2962 PF00202 Aminotransferase class-III Acav_2963 PF01037 Lrp/AsnC ligand binding domain Acav_2968 PF04055 Radical SAM superfamily Acav_2972 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_2972 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_2972 PF12806 Acetyl-CoA dehydrogenase C-terminal like Acav_2972 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_2973 PF01012 Electron transfer flavoprotein domain Acav_2973 PF00766 Electron transfer flavoprotein FAD-binding domain Acav_2974 PF01012 Electron transfer flavoprotein domain Acav_2975 PF12795 Mechanosensitive ion channel porin domain Acav_2975 PF00924 Mechanosensitive ion channel Acav_2975 PF12794 Mechanosensitive ion channel inner membrane domain 1 Acav_2976 PF03421 YopJ Serine/Threonine acetyltransferase Acav_2977 PF00378 Enoyl-CoA hydratase/isomerase Acav_2978 PF00850 Histone deacetylase domain Acav_2979 PF07726 ATPase family associated with various cellular activities (AAA) Acav_2979 PF17863 AAA lid domain Acav_2981 PF13559 Domain of unknown function (DUF4129) Acav_2981 PF01841 Transglutaminase-like superfamily Acav_2981 PF11992 Domain of unknown function (DUF3488) Acav_2982 PF13406 Transglycosylase SLT domain Acav_2985 PF03435 Saccharopine dehydrogenase NADP binding domain Acav_2986 PF13193 AMP-binding enzyme C-terminal domain Acav_2986 PF00501 AMP-binding enzyme Acav_2989 PF07690 Major Facilitator Superfamily Acav_2993 PF13458 Periplasmic binding protein Acav_2996 PF00814 Glycoprotease family Acav_2997 PF13458 Periplasmic binding protein Acav_2998 PF00072 Response regulator receiver domain Acav_2998 PF03861 ANTAR domain Acav_3001 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3002 PF00005 ABC transporter Acav_3003 PF01872 RibD C-terminal domain Acav_3007 PF07690 Major Facilitator Superfamily Acav_3008 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3008 PF03466 LysR substrate binding domain Acav_3009 PF01557 Fumarylacetoacetate (FAA) hydrolase family Acav_3011 PF01565 FAD binding domain Acav_3011 PF02913 FAD linked oxidases, C-terminal domain Acav_3012 PF00171 Aldehyde dehydrogenase family Acav_3014 PF07690 Major Facilitator Superfamily Acav_3015 PF01557 Fumarylacetoacetate (FAA) hydrolase family Acav_3016 PF02558 Ketopantoate reductase PanE/ApbA Acav_3016 PF08546 Ketopantoate reductase PanE/ApbA C terminal Acav_3018 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3018 PF03466 LysR substrate binding domain Acav_3024 PF00135 Carboxylesterase family Acav_3029 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3029 PF16591 Helical bimodular sensor domain Acav_3029 PF00672 HAMP domain Acav_3030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3030 PF01627 Hpt domain Acav_3030 PF01584 CheW-like domain Acav_3030 PF02895 Signal transducing histidine kinase, homodimeric domain Acav_3031 PF00106 short chain dehydrogenase Acav_3032 PF03466 LysR substrate binding domain Acav_3032 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3034 PF01204 Trehalase Acav_3035 PF01039 Carboxyl transferase domain Acav_3036 PF00296 Luciferase-like monooxygenase Acav_3037 PF00571 CBS domain Acav_3037 PF00478 IMP dehydrogenase / GMP reductase domain Acav_3038 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3038 PF08447 PAS fold Acav_3039 PF00529 HlyD membrane-fusion protein of T1SS Acav_3039 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Acav_3040 PF00873 AcrB/AcrD/AcrF family Acav_3041 PF02321 Outer membrane efflux protein Acav_3042 PF03975 CheD chemotactic sensory transduction Acav_3043 PF03705 CheR methyltransferase, all-alpha domain Acav_3043 PF01739 CheR methyltransferase, SAM binding domain Acav_3044 PF01584 CheW-like domain Acav_3045 PF08447 PAS fold Acav_3047 PF18267 Rubredoxin NAD+ reductase C-terminal domain Acav_3047 PF04324 BFD-like [2Fe-2S] binding domain Acav_3047 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Acav_3047 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Acav_3047 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_3048 PF00355 Rieske [2Fe-2S] domain Acav_3049 PF00384 Molybdopterin oxidoreductase Acav_3049 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Acav_3049 PF01568 Molydopterin dinucleotide binding domain Acav_3050 PF00591 Glycosyl transferase family, a/b domain Acav_3050 PF02885 Glycosyl transferase family, helical bundle domain Acav_3051 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Acav_3053 PF00553 Cellulose binding domain Acav_3053 PF00150 Cellulase (glycosyl hydrolase family 5) Acav_3055 PF03061 Thioesterase superfamily Acav_3056 PF00484 Carbonic anhydrase Acav_3063 PF03707 Bacterial signalling protein N terminal repeat Acav_3063 PF00990 Diguanylate cyclase, GGDEF domain Acav_3063 PF00563 EAL domain Acav_3064 PF01165 Ribosomal protein S21 Acav_3065 PF09424 Yqey-like protein Acav_3066 PF02798 Glutathione S-transferase, N-terminal domain Acav_3066 PF00043 Glutathione S-transferase, C-terminal domain Acav_3068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3068 PF03466 LysR substrate binding domain Acav_3069 PF00180 Isocitrate/isopropylmalate dehydrogenase Acav_3070 PF01734 Patatin-like phospholipase Acav_3071 PF07690 Major Facilitator Superfamily Acav_3072 PF14031 Putative serine dehydratase domain Acav_3072 PF01168 Alanine racemase, N-terminal domain Acav_3073 PF03466 LysR substrate binding domain Acav_3073 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3076 PF03466 LysR substrate binding domain Acav_3076 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3077 PF02371 Transposase IS116/IS110/IS902 family Acav_3077 PF01548 Transposase Acav_3078 PF03401 Tripartite tricarboxylate transporter family receptor Acav_3079 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Acav_3079 PF08666 SAF domain Acav_3080 PF00171 Aldehyde dehydrogenase family Acav_3081 PF03328 HpcH/HpaI aldolase/citrate lyase family Acav_3084 PF01523 Putative modulator of DNA gyrase Acav_3085 PF04751 Protein of unknown function (DUF615) Acav_3086 PF00994 Probable molybdopterin binding domain Acav_3088 PF00132 Bacterial transferase hexapeptide (six repeats) Acav_3089 PF00588 SpoU rRNA Methylase family Acav_3090 PF00982 Glycosyltransferase family 20 Acav_3091 PF00005 ABC transporter Acav_3094 PF00459 Inositol monophosphatase family Acav_3095 PF00072 Response regulator receiver domain Acav_3096 PF00672 HAMP domain Acav_3096 PF00072 Response regulator receiver domain Acav_3096 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Acav_3096 PF01627 Hpt domain Acav_3096 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3096 PF00512 His Kinase A (phospho-acceptor) domain Acav_3098 PF03972 MmgE/PrpD family Acav_3099 PF00583 Acetyltransferase (GNAT) family Acav_3099 PF13380 CoA binding domain Acav_3099 PF13607 Succinyl-CoA ligase like flavodoxin domain Acav_3100 PF00378 Enoyl-CoA hydratase/isomerase Acav_3101 PF03401 Tripartite tricarboxylate transporter family receptor Acav_3102 PF09339 IclR helix-turn-helix domain Acav_3104 PF00563 EAL domain Acav_3104 PF08448 PAS fold Acav_3104 PF00990 Diguanylate cyclase, GGDEF domain Acav_3104 PF08447 PAS fold Acav_3105 PF05192 MutS domain III Acav_3105 PF05190 MutS family domain IV Acav_3105 PF01624 MutS domain I Acav_3105 PF00488 MutS domain V Acav_3105 PF05188 MutS domain II Acav_3110 PF14220 Domain of unknown function (DUF4329) Acav_3110 PF03527 RHS protein Acav_3110 PF05593 RHS Repeat Acav_3111 PF04717 Type VI secretion system, phage-baseplate injector Acav_3115 PF00990 Diguanylate cyclase, GGDEF domain Acav_3115 PF00563 EAL domain Acav_3115 PF03707 Bacterial signalling protein N terminal repeat Acav_3116 PF02673 Bacitracin resistance protein BacA Acav_3117 PF02321 Outer membrane efflux protein Acav_3118 PF00873 AcrB/AcrD/AcrF family Acav_3119 PF00873 AcrB/AcrD/AcrF family Acav_3120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Acav_3122 PF07694 5TMR of 5TMR-LYT Acav_3122 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3122 PF06580 Histidine kinase Acav_3123 PF04397 LytTr DNA-binding domain Acav_3123 PF00072 Response regulator receiver domain Acav_3124 PF01810 LysE type translocator Acav_3126 PF00005 ABC transporter Acav_3128 PF03459 TOBE domain Acav_3128 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3129 PF14220 Domain of unknown function (DUF4329) Acav_3129 PF03527 RHS protein Acav_3129 PF05593 RHS Repeat Acav_3131 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3132 PF03459 TOBE domain Acav_3132 PF00005 ABC transporter Acav_3133 PF10397 Adenylosuccinate lyase C-terminus Acav_3133 PF00206 Lyase Acav_3134 PF02028 BCCT, betaine/carnitine/choline family transporter Acav_3135 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Acav_3135 PF00128 Alpha amylase, catalytic domain Acav_3135 PF02806 Alpha amylase, C-terminal all-beta domain Acav_3136 PF00128 Alpha amylase, catalytic domain Acav_3136 PF11896 Domain of unknown function (DUF3416) Acav_3137 PF00128 Alpha amylase, catalytic domain Acav_3137 PF16657 Maltogenic Amylase, C-terminal domain Acav_3138 PF05552 Conserved TM helix Acav_3140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Acav_3143 PF03480 Bacterial extracellular solute-binding protein, family 7 Acav_3144 PF02780 Transketolase, C-terminal domain Acav_3144 PF02779 Transketolase, pyrimidine binding domain Acav_3144 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Acav_3145 PF00348 Polyprenyl synthetase Acav_3146 PF02609 Exonuclease VII small subunit Acav_3147 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Acav_3147 PF00355 Rieske [2Fe-2S] domain Acav_3149 PF00581 Rhodanese-like domain Acav_3150 PF03180 NLPA lipoprotein Acav_3151 PF00005 ABC transporter Acav_3151 PF09383 NIL domain Acav_3152 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3153 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Acav_3153 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_3154 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Acav_3154 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_3154 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_3155 PF00296 Luciferase-like monooxygenase Acav_3156 PF05247 Flagellar transcriptional activator (FlhD) Acav_3157 PF05280 Flagellar transcriptional activator (FlhC) Acav_3160 PF01594 AI-2E family transporter Acav_3161 PF12805 FUSC-like inner membrane protein yccS Acav_3162 PF00311 Phosphoenolpyruvate carboxylase Acav_3163 PF03900 Porphobilinogen deaminase, C-terminal domain Acav_3163 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Acav_3167 PF12848 ABC transporter Acav_3167 PF16326 ABC transporter C-terminal domain Acav_3167 PF00005 ABC transporter Acav_3169 PF01435 Peptidase family M48 Acav_3171 PF00483 Nucleotidyl transferase Acav_3172 PF01206 Sulfurtransferase TusA Acav_3173 PF00293 NUDIX domain Acav_3173 PF09297 NADH pyrophosphatase zinc ribbon domain Acav_3173 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Acav_3174 PF00291 Pyridoxal-phosphate dependent enzyme Acav_3180 PF03466 LysR substrate binding domain Acav_3180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3181 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_3181 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_3181 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_3182 PF02515 CoA-transferase family III Acav_3186 PF00175 Oxidoreductase NAD-binding domain Acav_3186 PF00970 Oxidoreductase FAD-binding domain Acav_3186 PF00111 2Fe-2S iron-sulfur cluster binding domain Acav_3188 PF03401 Tripartite tricarboxylate transporter family receptor Acav_3189 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Acav_3190 PF12626 Polymerase A arginine-rich C-terminus Acav_3190 PF12627 Probable RNA and SrmB- binding site of polymerase A Acav_3190 PF01743 Poly A polymerase head domain Acav_3192 PF00308 Bacterial dnaA protein Acav_3193 PF00586 AIR synthase related protein, N-terminal domain Acav_3193 PF02769 AIR synthase related protein, C-terminal domain Acav_3196 PF01965 DJ-1/PfpI family Acav_3197 PF01965 DJ-1/PfpI family Acav_3198 PF11799 impB/mucB/samB family C-terminal domain Acav_3198 PF00817 impB/mucB/samB family Acav_3202 PF00672 HAMP domain Acav_3202 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3202 PF02203 Tar ligand binding domain homologue Acav_3203 PF01070 FMN-dependent dehydrogenase Acav_3206 PF00912 Transglycosylase Acav_3206 PF00905 Penicillin binding protein transpeptidase domain Acav_3206 PF14814 Bifunctional transglycosylase second domain Acav_3207 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3207 PF02203 Tar ligand binding domain homologue Acav_3207 PF00672 HAMP domain Acav_3213 PF07690 Major Facilitator Superfamily Acav_3214 PF03466 LysR substrate binding domain Acav_3214 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3215 PF03401 Tripartite tricarboxylate transporter family receptor Acav_3216 PF14698 Argininosuccinate lyase C-terminal Acav_3216 PF00206 Lyase Acav_3217 PF07694 5TMR of 5TMR-LYT Acav_3217 PF06580 Histidine kinase Acav_3218 PF00072 Response regulator receiver domain Acav_3218 PF04397 LytTr DNA-binding domain Acav_3219 PF01548 Transposase Acav_3219 PF02371 Transposase IS116/IS110/IS902 family Acav_3220 PF00206 Lyase Acav_3220 PF14698 Argininosuccinate lyase C-terminal Acav_3222 PF01738 Dienelactone hydrolase family Acav_3228 PF01177 Asp/Glu/Hydantoin racemase Acav_3229 PF00497 Bacterial extracellular solute-binding proteins, family 3 Acav_3230 PF01266 FAD dependent oxidoreductase Acav_3231 PF03466 LysR substrate binding domain Acav_3231 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3236 PF01367 5'-3' exonuclease, C-terminal SAM fold Acav_3236 PF00476 DNA polymerase family A Acav_3236 PF01612 3'-5' exonuclease Acav_3236 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Acav_3238 PF01636 Phosphotransferase enzyme family Acav_3250 PF13361 UvrD-like helicase C-terminal domain Acav_3250 PF00580 UvrD/REP helicase N-terminal domain Acav_3252 PF07687 Peptidase dimerisation domain Acav_3252 PF01546 Peptidase family M20/M25/M40 Acav_3253 PF03401 Tripartite tricarboxylate transporter family receptor Acav_3255 PF00478 IMP dehydrogenase / GMP reductase domain Acav_3257 PF17754 MftR C-terminal domain Acav_3257 PF00440 Bacterial regulatory proteins, tetR family Acav_3259 PF00072 Response regulator receiver domain Acav_3259 PF00158 Sigma-54 interaction domain Acav_3259 PF02954 Bacterial regulatory protein, Fis family Acav_3260 PF16736 Single Cache-like Acav_3260 PF00989 PAS fold Acav_3260 PF00512 His Kinase A (phospho-acceptor) domain Acav_3260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3261 PF00309 Sigma-54 factor, Activator interacting domain (AID) Acav_3261 PF04552 Sigma-54, DNA binding domain Acav_3261 PF04963 Sigma-54 factor, core binding domain Acav_3264 PF07690 Major Facilitator Superfamily Acav_3265 PF00990 Diguanylate cyclase, GGDEF domain Acav_3265 PF05231 MASE1 Acav_3265 PF08447 PAS fold Acav_3265 PF00563 EAL domain Acav_3265 PF13426 PAS domain Acav_3265 PF08448 PAS fold Acav_3266 PF00270 DEAD/DEAH box helicase Acav_3266 PF00271 Helicase conserved C-terminal domain Acav_3267 PF00929 Exonuclease Acav_3268 PF01435 Peptidase family M48 Acav_3269 PF01329 Pterin 4 alpha carbinolamine dehydratase Acav_3270 PF03193 RsgA GTPase Acav_3271 PF17113 Regulatory signalling modulator protein AmpE Acav_3271 PF03186 CobD/Cbib protein Acav_3272 PF00293 NUDIX domain Acav_3273 PF01245 Ribosomal protein L19 Acav_3274 PF01746 tRNA (Guanine-1)-methyltransferase Acav_3275 PF05239 PRC-barrel domain Acav_3275 PF01782 RimM N-terminal domain Acav_3276 PF00886 Ribosomal protein S16 Acav_3279 PF01384 Phosphate transporter family Acav_3280 PF01865 Protein of unknown function DUF47 Acav_3282 PF00005 ABC transporter Acav_3283 PF12399 Branched-chain amino acid ATP-binding cassette transporter Acav_3283 PF00005 ABC transporter Acav_3284 PF02653 Branched-chain amino acid transport system / permease component Acav_3284 PF11862 Domain of unknown function (DUF3382) Acav_3285 PF02653 Branched-chain amino acid transport system / permease component Acav_3286 PF12002 MgsA AAA+ ATPase C terminal Acav_3286 PF00004 ATPase family associated with various cellular activities (AAA) Acav_3286 PF16193 AAA C-terminal domain Acav_3287 PF12002 MgsA AAA+ ATPase C terminal Acav_3287 PF00004 ATPase family associated with various cellular activities (AAA) Acav_3287 PF16193 AAA C-terminal domain Acav_3288 PF03167 Uracil DNA glycosylase superfamily Acav_3290 PF03548 Outer membrane lipoprotein carrier protein LolA Acav_3291 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Acav_3291 PF17854 FtsK alpha domain Acav_3291 PF09397 Ftsk gamma domain Acav_3291 PF01580 FtsK/SpoIIIE family Acav_3292 PF07992 Pyridine nucleotide-disulphide oxidoreductase Acav_3293 PF00830 Ribosomal L28 family Acav_3294 PF00471 Ribosomal protein L33 Acav_3295 PF00392 Bacterial regulatory proteins, gntR family Acav_3295 PF00155 Aminotransferase class I and II Acav_3298 PF01029 NusB family Acav_3298 PF01189 16S rRNA methyltransferase RsmB/F Acav_3299 PF00544 Pectate lyase Acav_3301 PF00672 HAMP domain Acav_3301 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3301 PF00512 His Kinase A (phospho-acceptor) domain Acav_3302 PF00486 Transcriptional regulatory protein, C terminal Acav_3302 PF00072 Response regulator receiver domain Acav_3305 PF00551 Formyl transferase Acav_3306 PF04337 Protein of unknown function, DUF480 Acav_3307 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_3307 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_3307 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_3310 PF00553 Cellulose binding domain Acav_3310 PF00704 Glycosyl hydrolases family 18 Acav_3310 PF00041 Fibronectin type III domain Acav_3312 PF02203 Tar ligand binding domain homologue Acav_3312 PF00672 HAMP domain Acav_3312 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3313 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Acav_3315 PF03480 Bacterial extracellular solute-binding protein, family 7 Acav_3316 PF00593 TonB dependent receptor Acav_3316 PF07715 TonB-dependent Receptor Plug Domain Acav_3319 PF01687 Riboflavin kinase Acav_3319 PF06574 FAD synthetase Acav_3320 PF06827 Zinc finger found in FPG and IleRS Acav_3320 PF08264 Anticodon-binding domain of tRNA Acav_3320 PF00133 tRNA synthetases class I (I, L, M and V) Acav_3321 PF01252 Signal peptidase (SPase) II Acav_3323 PF00356 Bacterial regulatory proteins, lacI family Acav_3325 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3326 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3327 PF17850 CysA C-terminal regulatory domain Acav_3327 PF00005 ABC transporter Acav_3327 PF12857 TOBE-like domain Acav_3328 PF00149 Calcineurin-like phosphoesterase Acav_3330 PF02690 Na+/Pi-cotransporter Acav_3333 PF03466 LysR substrate binding domain Acav_3333 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3335 PF00107 Zinc-binding dehydrogenase Acav_3335 PF08240 Alcohol dehydrogenase GroES-like domain Acav_3336 PF13593 SBF-like CPA transporter family (DUF4137) Acav_3338 PF17645 Arylmalonate decarboxylase Acav_3339 PF00795 Carbon-nitrogen hydrolase Acav_3340 PF01557 Fumarylacetoacetate (FAA) hydrolase family Acav_3341 PF07883 Cupin domain Acav_3342 PF01494 FAD binding domain Acav_3345 PF07690 Major Facilitator Superfamily Acav_3347 PF12833 Helix-turn-helix domain Acav_3347 PF14525 AraC-binding-like domain Acav_3349 PF01593 Flavin containing amine oxidoreductase Acav_3350 PF04199 Putative cyclase Acav_3351 PF01613 Flavin reductase like domain Acav_3352 PF17885 Styrene monooxygenase A putative substrate binding domain Acav_3355 PF00107 Zinc-binding dehydrogenase Acav_3355 PF08240 Alcohol dehydrogenase GroES-like domain Acav_3356 PF00892 EamA-like transporter family Acav_3364 PF03527 RHS protein Acav_3364 PF05593 RHS Repeat Acav_3364 PF14220 Domain of unknown function (DUF4329) Acav_3369 PF04717 Type VI secretion system, phage-baseplate injector Acav_3370 PF00563 EAL domain Acav_3370 PF00990 Diguanylate cyclase, GGDEF domain Acav_3370 PF03707 Bacterial signalling protein N terminal repeat Acav_3373 PF00781 Diacylglycerol kinase catalytic domain Acav_3375 PF07690 Major Facilitator Superfamily Acav_3379 PF00005 ABC transporter Acav_3381 PF00005 ABC transporter Acav_3381 PF12399 Branched-chain amino acid ATP-binding cassette transporter Acav_3382 PF02653 Branched-chain amino acid transport system / permease component Acav_3383 PF02653 Branched-chain amino acid transport system / permease component Acav_3385 PF00375 Sodium:dicarboxylate symporter family Acav_3388 PF01037 Lrp/AsnC ligand binding domain Acav_3392 PF09339 IclR helix-turn-helix domain Acav_3392 PF01614 Bacterial transcriptional regulator Acav_3393 PF03401 Tripartite tricarboxylate transporter family receptor Acav_3394 PF02515 CoA-transferase family III Acav_3395 PF00285 Citrate synthase, C-terminal domain Acav_3398 PF11008 Protein of unknown function (DUF2846) Acav_3400 PF02785 Biotin carboxylase C-terminal domain Acav_3400 PF00289 Biotin carboxylase, N-terminal domain Acav_3400 PF00364 Biotin-requiring enzyme Acav_3400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Acav_3401 PF02682 Carboxyltransferase domain, subdomain C and D Acav_3402 PF07286 Protein of unknown function (DUF1445) Acav_3403 PF03746 LamB/YcsF family Acav_3407 PF01402 Ribbon-helix-helix protein, copG family Acav_3407 PF08753 NikR C terminal nickel binding domain Acav_3410 PF01070 FMN-dependent dehydrogenase Acav_3411 PF07729 FCD domain Acav_3411 PF00392 Bacterial regulatory proteins, gntR family Acav_3412 PF02652 L-lactate permease Acav_3416 PF00990 Diguanylate cyclase, GGDEF domain Acav_3416 PF08447 PAS fold Acav_3416 PF08448 PAS fold Acav_3416 PF00563 EAL domain Acav_3417 PF00072 Response regulator receiver domain Acav_3418 PF00072 Response regulator receiver domain Acav_3418 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3418 PF00512 His Kinase A (phospho-acceptor) domain Acav_3418 PF01627 Hpt domain Acav_3421 PF00547 Urease, gamma subunit Acav_3423 PF00699 Urease beta subunit Acav_3424 PF00449 Urease alpha-subunit, N-terminal domain Acav_3424 PF01979 Amidohydrolase family Acav_3426 PF02814 UreE urease accessory protein, N-terminal domain Acav_3426 PF05194 UreE urease accessory protein, C-terminal domain Acav_3427 PF01730 UreF Acav_3428 PF02492 CobW/HypB/UreG, nucleotide-binding domain Acav_3436 PF00005 ABC transporter Acav_3436 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Acav_3437 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3437 PF12911 N-terminal TM domain of oligopeptide transport permease C Acav_3438 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3439 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Acav_3441 PF00392 Bacterial regulatory proteins, gntR family Acav_3442 PF00202 Aminotransferase class-III Acav_3445 PF02525 Flavodoxin-like fold Acav_3447 PF08240 Alcohol dehydrogenase GroES-like domain Acav_3447 PF00107 Zinc-binding dehydrogenase Acav_3449 PF01590 GAF domain Acav_3449 PF00158 Sigma-54 interaction domain Acav_3449 PF02954 Bacterial regulatory protein, Fis family Acav_3450 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term Acav_3450 PF12833 Helix-turn-helix domain Acav_3451 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3451 PF12729 Four helix bundle sensory module for signal transduction Acav_3451 PF00672 HAMP domain Acav_3452 PF00072 Response regulator receiver domain Acav_3454 PF01584 CheW-like domain Acav_3454 PF01627 Hpt domain Acav_3454 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3454 PF02895 Signal transducing histidine kinase, homodimeric domain Acav_3454 PF09078 CheY binding Acav_3457 PF01584 CheW-like domain Acav_3458 PF13426 PAS domain Acav_3458 PF00990 Diguanylate cyclase, GGDEF domain Acav_3458 PF00563 EAL domain Acav_3459 PF01739 CheR methyltransferase, SAM binding domain Acav_3459 PF03705 CheR methyltransferase, all-alpha domain Acav_3460 PF03975 CheD chemotactic sensory transduction Acav_3461 PF00072 Response regulator receiver domain Acav_3461 PF01339 CheB methylesterase Acav_3462 PF07963 Prokaryotic N-terminal methylation motif Acav_3463 PF14245 Type IV pilin PilA Acav_3463 PF07963 Prokaryotic N-terminal methylation motif Acav_3464 PF05567 Neisseria PilC beta-propeller domain Acav_3468 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Acav_3468 PF01872 RibD C-terminal domain Acav_3475 PF13426 PAS domain Acav_3475 PF00072 Response regulator receiver domain Acav_3475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3481 PF04545 Sigma-70, region 4 Acav_3481 PF04542 Sigma-70 region 2 Acav_3482 PF01593 Flavin containing amine oxidoreductase Acav_3485 PF00106 short chain dehydrogenase Acav_3488 PF04055 Radical SAM superfamily Acav_3488 PF06969 HemN C-terminal domain Acav_3489 PF01725 Ham1 family Acav_3490 PF03725 3' exoribonuclease family, domain 2 Acav_3490 PF01138 3' exoribonuclease family, domain 1 Acav_3492 PF03793 PASTA domain Acav_3492 PF00069 Protein kinase domain Acav_3493 PF08340 Domain of unknown function (DUF1732) Acav_3493 PF03755 YicC-like family, N-terminal region Acav_3494 PF00625 Guanylate kinase Acav_3495 PF01192 RNA polymerase Rpb6 Acav_3496 PF04607 Region found in RelA / SpoT proteins Acav_3496 PF02824 TGS domain Acav_3496 PF13291 ACT domain Acav_3497 PF01272 Transcription elongation factor, GreA/GreB, C-term Acav_3497 PF03449 Transcription elongation factor, N-terminal Acav_3513 PF00072 Response regulator receiver domain Acav_3513 PF00196 Bacterial regulatory proteins, luxR family Acav_3515 PF01628 HrcA protein C terminal domain Acav_3515 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Acav_3516 PF01513 ATP-NAD kinase Acav_3517 PF02463 RecF/RecN/SMC N terminal domain Acav_3518 PF03668 P-loop ATPase protein family Acav_3519 PF00633 Helix-hairpin-helix motif Acav_3519 PF14815 NUDIX domain Acav_3519 PF00730 HhH-GPD superfamily base excision DNA repair protein Acav_3521 PF06827 Zinc finger found in FPG and IleRS Acav_3521 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Acav_3521 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Acav_3524 PF00288 GHMP kinases N terminal domain Acav_3524 PF08544 GHMP kinases C terminal Acav_3525 PF14572 Phosphoribosyl synthetase-associated domain Acav_3525 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Acav_3526 PF01386 Ribosomal L25p family Acav_3526 PF14693 Ribosomal protein TL5, C-terminal domain Acav_3527 PF01195 Peptidyl-tRNA hydrolase Acav_3528 PF00037 4Fe-4S binding domain Acav_3530 PF12911 N-terminal TM domain of oligopeptide transport permease C Acav_3530 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3531 PF00005 ABC transporter Acav_3531 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Acav_3532 PF00005 ABC transporter Acav_3532 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Acav_3535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Acav_3537 PF07804 HipA-like C-terminal domain Acav_3538 PF00171 Aldehyde dehydrogenase family Acav_3539 PF13378 Enolase C-terminal domain-like Acav_3539 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Acav_3540 PF03401 Tripartite tricarboxylate transporter family receptor Acav_3541 PF02371 Transposase IS116/IS110/IS902 family Acav_3541 PF01548 Transposase Acav_3542 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Acav_3542 PF00356 Bacterial regulatory proteins, lacI family Acav_3548 PF01227 GTP cyclohydrolase I Acav_3549 PF13091 PLD-like domain Acav_3550 PF03372 Endonuclease/Exonuclease/phosphatase family Acav_3552 PF00293 NUDIX domain Acav_3555 PF02938 GAD domain Acav_3555 PF00152 tRNA synthetases class II (D, K and N) Acav_3555 PF01336 OB-fold nucleic acid binding domain Acav_3559 PF03109 ABC1 family Acav_3562 PF01209 ubiE/COQ5 methyltransferase family Acav_3564 PF00990 Diguanylate cyclase, GGDEF domain Acav_3564 PF00072 Response regulator receiver domain Acav_3567 PF00672 HAMP domain Acav_3567 PF02203 Tar ligand binding domain homologue Acav_3567 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3568 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Acav_3568 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Acav_3568 PF01842 ACT domain Acav_3569 PF13416 Bacterial extracellular solute-binding protein Acav_3570 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3571 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3572 PF17912 MalK OB fold domain Acav_3572 PF00005 ABC transporter Acav_3574 PF03009 Glycerophosphoryl diester phosphodiesterase family Acav_3575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3575 PF00672 HAMP domain Acav_3575 PF02203 Tar ligand binding domain homologue Acav_3576 PF12795 Mechanosensitive ion channel porin domain Acav_3576 PF00924 Mechanosensitive ion channel Acav_3576 PF12794 Mechanosensitive ion channel inner membrane domain 1 Acav_3577 PF03401 Tripartite tricarboxylate transporter family receptor Acav_3578 PF03466 LysR substrate binding domain Acav_3578 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3579 PF07690 Major Facilitator Superfamily Acav_3581 PF01488 Shikimate / quinate 5-dehydrogenase Acav_3581 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Acav_3581 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Acav_3582 PF03462 PCRF domain Acav_3582 PF00472 RF-1 domain Acav_3583 PF05175 Methyltransferase small domain Acav_3583 PF17827 PrmC N-terminal domain Acav_3584 PF00462 Glutaredoxin Acav_3585 PF05362 Lon protease (S16) C-terminal proteolytic domain Acav_3585 PF00004 ATPase family associated with various cellular activities (AAA) Acav_3585 PF02190 ATP-dependent protease La (LON) substrate-binding domain Acav_3586 PF01595 Cyclin M transmembrane N-terminal domain Acav_3586 PF03471 Transporter associated domain Acav_3586 PF00571 CBS domain Acav_3587 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Acav_3587 PF01464 Transglycosylase SLT domain Acav_3588 PF03129 Anticodon binding domain Acav_3588 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Acav_3588 PF04073 Aminoacyl-tRNA editing domain Acav_3589 PF00293 NUDIX domain Acav_3590 PF01472 PUA domain Acav_3590 PF00696 Amino acid kinase family Acav_3591 PF01926 50S ribosome-binding GTPase Acav_3591 PF01018 GTP1/OBG Acav_3592 PF01016 Ribosomal L27 protein Acav_3593 PF00829 Ribosomal prokaryotic L21 protein Acav_3594 PF00348 Polyprenyl synthetase Acav_3595 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Acav_3595 PF00437 Type II/IV secretion system protein Acav_3596 PF00482 Type II secretion system (T2SS), protein F Acav_3597 PF01478 Type IV leader peptidase family Acav_3597 PF06750 Bacterial Peptidase A24 N-terminal domain Acav_3598 PF01121 Dephospho-CoA kinase Acav_3599 PF07072 Cell division protein Acav_3600 PF03884 DNA gyrase inhibitor YacG Acav_3601 PF00293 NUDIX domain Acav_3603 PF01960 ArgJ family Acav_3604 PF07517 SecA DEAD-like domain Acav_3604 PF01043 SecA preprotein cross-linking domain Acav_3604 PF07516 SecA Wing and Scaffold domain Acav_3604 PF02810 SEC-C motif Acav_3605 PF08525 Opacity-associated protein A N-terminal motif Acav_3605 PF01551 Peptidase family M23 Acav_3605 PF01476 LysM domain Acav_3607 PF04386 Stringent starvation protein B Acav_3608 PF00043 Glutathione S-transferase, C-terminal domain Acav_3608 PF02798 Glutathione S-transferase, N-terminal domain Acav_3609 PF02167 Cytochrome C1 family Acav_3610 PF00033 Cytochrome b/b6/petB Acav_3610 PF00032 Cytochrome b(C-terminal)/b6/petD Acav_3611 PF00355 Rieske [2Fe-2S] domain Acav_3611 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Acav_3612 PF01741 Large-conductance mechanosensitive channel, MscL Acav_3613 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Acav_3614 PF00005 ABC transporter Acav_3615 PF02687 FtsX-like permease family Acav_3615 PF12704 MacB-like periplasmic core domain Acav_3617 PF17768 RecJ OB domain Acav_3617 PF02272 DHHA1 domain Acav_3617 PF01368 DHH family Acav_3618 PF02203 Tar ligand binding domain homologue Acav_3618 PF00672 HAMP domain Acav_3618 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3619 PF02811 PHP domain Acav_3620 PF01300 Telomere recombination Acav_3621 PF00672 HAMP domain Acav_3621 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3621 PF12729 Four helix bundle sensory module for signal transduction Acav_3622 PF02163 Peptidase family M50 Acav_3623 PF00579 tRNA synthetases class I (W and Y) Acav_3624 PF03358 NADPH-dependent FMN reductase Acav_3625 PF03960 ArsC family Acav_3626 PF01022 Bacterial regulatory protein, arsR family Acav_3627 PF05593 RHS Repeat Acav_3627 PF03527 RHS protein Acav_3634 PF00202 Aminotransferase class-III Acav_3640 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Acav_3641 PF00664 ABC transporter transmembrane region Acav_3641 PF00005 ABC transporter Acav_3643 PF00551 Formyl transferase Acav_3645 PF00593 TonB dependent receptor Acav_3645 PF07715 TonB-dependent Receptor Plug Domain Acav_3646 PF07993 Male sterility protein Acav_3646 PF00668 Condensation domain Acav_3646 PF13193 AMP-binding enzyme C-terminal domain Acav_3646 PF00550 Phosphopantetheine attachment site Acav_3646 PF00501 AMP-binding enzyme Acav_3647 PF00668 Condensation domain Acav_3647 PF13193 AMP-binding enzyme C-terminal domain Acav_3647 PF00501 AMP-binding enzyme Acav_3647 PF00550 Phosphopantetheine attachment site Acav_3648 PF13193 AMP-binding enzyme C-terminal domain Acav_3648 PF00668 Condensation domain Acav_3648 PF00550 Phosphopantetheine attachment site Acav_3648 PF00975 Thioesterase domain Acav_3648 PF00501 AMP-binding enzyme Acav_3649 PF00698 Acyl transferase domain Acav_3649 PF00668 Condensation domain Acav_3649 PF00109 Beta-ketoacyl synthase, N-terminal domain Acav_3649 PF16197 Ketoacyl-synthetase C-terminal extension Acav_3649 PF00550 Phosphopantetheine attachment site Acav_3649 PF02801 Beta-ketoacyl synthase, C-terminal domain Acav_3650 PF00668 Condensation domain Acav_3650 PF13193 AMP-binding enzyme C-terminal domain Acav_3650 PF00501 AMP-binding enzyme Acav_3650 PF00550 Phosphopantetheine attachment site Acav_3653 PF03621 MbtH-like protein Acav_3655 PF08281 Sigma-70, region 4 Acav_3655 PF04542 Sigma-70 region 2 Acav_3657 PF06314 Acetoacetate decarboxylase (ADC) Acav_3659 PF13609 Gram-negative porin Acav_3661 PF07683 Cobalamin synthesis protein cobW C-terminal domain Acav_3661 PF02492 CobW/HypB/UreG, nucleotide-binding domain Acav_3663 PF02538 Hydantoinase B/oxoprolinase Acav_3664 PF01968 Hydantoinase/oxoprolinase Acav_3664 PF05378 Hydantoinase/oxoprolinase N-terminal region Acav_3665 PF01557 Fumarylacetoacetate (FAA) hydrolase family Acav_3666 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3666 PF03466 LysR substrate binding domain Acav_3671 PF00012 Hsp70 protein Acav_3672 PF00012 Hsp70 protein Acav_3674 PF00654 Voltage gated chloride channel Acav_3675 PF05593 RHS Repeat Acav_3675 PF03527 RHS protein Acav_3675 PF14220 Domain of unknown function (DUF4329) Acav_3676 PF04717 Type VI secretion system, phage-baseplate injector Acav_3677 PF00675 Insulinase (Peptidase family M16) Acav_3677 PF05193 Peptidase M16 inactive domain Acav_3678 PF04116 Fatty acid hydroxylase superfamily Acav_3679 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3680 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3681 PF00497 Bacterial extracellular solute-binding proteins, family 3 Acav_3682 PF00795 Carbon-nitrogen hydrolase Acav_3683 PF00005 ABC transporter Acav_3684 PF00005 ABC transporter Acav_3692 PF03707 Bacterial signalling protein N terminal repeat Acav_3692 PF00563 EAL domain Acav_3692 PF00990 Diguanylate cyclase, GGDEF domain Acav_3702 PF01527 Transposase Acav_3703 PF13276 HTH-like domain Acav_3703 PF00665 Integrase core domain Acav_3707 PF00440 Bacterial regulatory proteins, tetR family Acav_3708 PF02403 Seryl-tRNA synthetase N-terminal domain Acav_3708 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Acav_3709 PF13291 ACT domain Acav_3709 PF00291 Pyridoxal-phosphate dependent enzyme Acav_3711 PF01595 Cyclin M transmembrane N-terminal domain Acav_3711 PF03471 Transporter associated domain Acav_3711 PF00571 CBS domain Acav_3712 PF02401 LytB protein Acav_3713 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Acav_3714 PF04002 RadC-like JAB domain Acav_3716 PF12833 Helix-turn-helix domain Acav_3718 PF01713 Smr domain Acav_3718 PF00488 MutS domain V Acav_3719 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3719 PF00512 His Kinase A (phospho-acceptor) domain Acav_3720 PF00072 Response regulator receiver domain Acav_3720 PF00486 Transcriptional regulatory protein, C terminal Acav_3723 PF00149 Calcineurin-like phosphoesterase Acav_3723 PF02872 5'-nucleotidase, C-terminal domain Acav_3724 PF04717 Type VI secretion system, phage-baseplate injector Acav_3729 PF14220 Domain of unknown function (DUF4329) Acav_3729 PF05593 RHS Repeat Acav_3729 PF03527 RHS protein Acav_3734 PF02634 FdhD/NarQ family Acav_3735 PF00384 Molybdopterin oxidoreductase Acav_3736 PF02203 Tar ligand binding domain homologue Acav_3736 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3736 PF00672 HAMP domain Acav_3737 PF07690 Major Facilitator Superfamily Acav_3738 PF10609 NUBPL iron-transfer P-loop NTPase Acav_3741 PF00205 Thiamine pyrophosphate enzyme, central domain Acav_3741 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Acav_3741 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Acav_3742 PF09334 tRNA synthetases class I (M) Acav_3742 PF01588 Putative tRNA binding domain Acav_3747 PF02616 Segregation and condensation protein ScpA Acav_3748 PF02910 Fumarate reductase flavoprotein C-term Acav_3748 PF00890 FAD binding domain Acav_3749 PF00202 Aminotransferase class-III Acav_3751 PF00155 Aminotransferase class I and II Acav_3753 PF01242 6-pyruvoyl tetrahydropterin synthase Acav_3757 PF04715 Anthranilate synthase component I, N terminal region Acav_3757 PF00425 chorismate binding enzyme Acav_3758 PF02445 Quinolinate synthetase A protein Acav_3759 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Acav_3759 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Acav_3760 PF02548 Ketopantoate hydroxymethyltransferase Acav_3761 PF02569 Pantoate-beta-alanine ligase Acav_3762 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Acav_3762 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Acav_3763 PF02556 Preprotein translocase subunit SecB Acav_3764 PF00462 Glutaredoxin Acav_3765 PF00581 Rhodanese-like domain Acav_3766 PF00300 Histidine phosphatase superfamily (branch 1) Acav_3767 PF03572 Peptidase family S41 Acav_3767 PF13180 PDZ domain Acav_3768 PF00899 ThiF family Acav_3770 PF00196 Bacterial regulatory proteins, luxR family Acav_3770 PF00072 Response regulator receiver domain Acav_3771 PF05231 MASE1 Acav_3771 PF07730 Histidine kinase Acav_3771 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3772 PF07043 Protein of unknown function (DUF1328) Acav_3776 PF10005 zinc-ribbon domain Acav_3776 PF15887 Putative zinc-binding metallo-peptidase Acav_3777 PF01467 Cytidylyltransferase-like Acav_3779 PF05193 Peptidase M16 inactive domain Acav_3780 PF05193 Peptidase M16 inactive domain Acav_3780 PF00675 Insulinase (Peptidase family M16) Acav_3781 PF02881 SRP54-type protein, helical bundle domain Acav_3781 PF00448 SRP54-type protein, GTPase domain Acav_3785 PF00672 HAMP domain Acav_3785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3785 PF02203 Tar ligand binding domain homologue Acav_3786 PF01554 MatE Acav_3787 PF01914 MarC family integral membrane protein Acav_3788 PF04545 Sigma-70, region 4 Acav_3788 PF04542 Sigma-70 region 2 Acav_3788 PF00140 Sigma-70 factor, region 1.2 Acav_3792 PF02630 SCO1/SenC Acav_3793 PF01040 UbiA prenyltransferase family Acav_3794 PF02628 Cytochrome oxidase assembly protein Acav_3797 PF00510 Cytochrome c oxidase subunit III Acav_3799 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Acav_3801 PF00115 Cytochrome C and Quinol oxidase polypeptide I Acav_3802 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Acav_3802 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Acav_3803 PF08241 Methyltransferase domain Acav_3805 PF00588 SpoU rRNA Methylase family Acav_3806 PF03466 LysR substrate binding domain Acav_3806 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3809 PF13614 AAA domain Acav_3810 PF01810 LysE type translocator Acav_3811 PF00999 Sodium/hydrogen exchanger family Acav_3811 PF02254 TrkA-N domain Acav_3812 PF13569 Domain of unknown function (DUF4132) Acav_3813 PF07728 AAA domain (dynein-related subfamily) Acav_3815 PF05762 VWA domain containing CoxE-like protein Acav_3816 PF04434 SWIM zinc finger Acav_3817 PF00583 Acetyltransferase (GNAT) family Acav_3820 PF12802 MarR family Acav_3821 PF07690 Major Facilitator Superfamily Acav_3822 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Acav_3822 PF00034 Cytochrome c Acav_3822 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Acav_3823 PF00111 2Fe-2S iron-sulfur cluster binding domain Acav_3823 PF01799 [2Fe-2S] binding domain Acav_3824 PF01494 FAD binding domain Acav_3825 PF17645 Arylmalonate decarboxylase Acav_3826 PF00561 alpha/beta hydrolase fold Acav_3828 PF00857 Isochorismatase family Acav_3829 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Acav_3829 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Acav_3829 PF00034 Cytochrome c Acav_3831 PF12802 MarR family Acav_3833 PF00723 Glycosyl hydrolases family 15 Acav_3834 PF03401 Tripartite tricarboxylate transporter family receptor Acav_3835 PF02426 Muconolactone delta-isomerase Acav_3836 PF02667 Short chain fatty acid transporter Acav_3837 PF00106 short chain dehydrogenase Acav_3840 PF12146 Serine aminopeptidase, S33 Acav_3841 PF00108 Thiolase, N-terminal domain Acav_3841 PF02803 Thiolase, C-terminal domain Acav_3842 PF01144 Coenzyme A transferase Acav_3843 PF01144 Coenzyme A transferase Acav_3844 PF01614 Bacterial transcriptional regulator Acav_3844 PF09339 IclR helix-turn-helix domain Acav_3848 PF00563 EAL domain Acav_3848 PF00990 Diguanylate cyclase, GGDEF domain Acav_3848 PF03707 Bacterial signalling protein N terminal repeat Acav_3849 PF00034 Cytochrome c Acav_3850 PF00004 ATPase family associated with various cellular activities (AAA) Acav_3850 PF01434 Peptidase family M41 Acav_3850 PF17862 AAA+ lid domain Acav_3854 PF04357 TamB, inner membrane protein subunit of TAM complex Acav_3859 PF07859 alpha/beta hydrolase fold Acav_3861 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Acav_3861 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Acav_3862 PF13091 PLD-like domain Acav_3863 PF08521 Two-component sensor kinase N-terminal Acav_3863 PF00512 His Kinase A (phospho-acceptor) domain Acav_3863 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3864 PF00072 Response regulator receiver domain Acav_3864 PF00486 Transcriptional regulatory protein, C terminal Acav_3865 PF13180 PDZ domain Acav_3870 PF09704 CRISPR-associated protein (Cas_Cas5) Acav_3874 PF01867 CRISPR associated protein Cas1 Acav_3875 PF09827 CRISPR associated protein Cas2 Acav_3877 PF00593 TonB dependent receptor Acav_3877 PF07715 TonB-dependent Receptor Plug Domain Acav_3879 PF00296 Luciferase-like monooxygenase Acav_3880 PF00482 Type II secretion system (T2SS), protein F Acav_3885 PF00664 ABC transporter transmembrane region Acav_3885 PF00005 ABC transporter Acav_3888 PF05981 CreA protein Acav_3891 PF13532 2OG-Fe(II) oxygenase superfamily Acav_3894 PF18011 C-terminal domain found in long catalases Acav_3894 PF06628 Catalase-related immune-responsive Acav_3894 PF00199 Catalase Acav_3895 PF00072 Response regulator receiver domain Acav_3895 PF00486 Transcriptional regulatory protein, C terminal Acav_3896 PF00672 HAMP domain Acav_3896 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3896 PF00512 His Kinase A (phospho-acceptor) domain Acav_3897 PF01339 CheB methylesterase Acav_3898 PF01739 CheR methyltransferase, SAM binding domain Acav_3898 PF03705 CheR methyltransferase, all-alpha domain Acav_3899 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3899 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Acav_3899 PF00072 Response regulator receiver domain Acav_3899 PF01627 Hpt domain Acav_3899 PF00512 His Kinase A (phospho-acceptor) domain Acav_3899 PF00672 HAMP domain Acav_3901 PF08448 PAS fold Acav_3901 PF00990 Diguanylate cyclase, GGDEF domain Acav_3903 PF07715 TonB-dependent Receptor Plug Domain Acav_3903 PF00593 TonB dependent receptor Acav_3905 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3906 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3906 PF12911 N-terminal TM domain of oligopeptide transport permease C Acav_3907 PF00005 ABC transporter Acav_3908 PF09382 RQC domain Acav_3908 PF00570 HRDC domain Acav_3908 PF16124 RecQ zinc-binding Acav_3908 PF00271 Helicase conserved C-terminal domain Acav_3908 PF00270 DEAD/DEAH box helicase Acav_3911 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Acav_3911 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Acav_3912 PF03450 CO dehydrogenase flavoprotein C-terminal domain Acav_3912 PF00941 FAD binding domain in molybdopterin dehydrogenase Acav_3913 PF10518 TAT (twin-arginine translocation) pathway signal sequence Acav_3913 PF01799 [2Fe-2S] binding domain Acav_3913 PF00111 2Fe-2S iron-sulfur cluster binding domain Acav_3915 PF08240 Alcohol dehydrogenase GroES-like domain Acav_3915 PF00107 Zinc-binding dehydrogenase Acav_3915 PF13823 Alcohol dehydrogenase GroES-associated Acav_3917 PF00881 Nitroreductase family Acav_3920 PF00149 Calcineurin-like phosphoesterase Acav_3920 PF02872 5'-nucleotidase, C-terminal domain Acav_3921 PF03466 LysR substrate binding domain Acav_3921 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3922 PF03601 Conserved hypothetical protein 698 Acav_3923 PF01272 Transcription elongation factor, GreA/GreB, C-term Acav_3923 PF03449 Transcription elongation factor, N-terminal Acav_3924 PF07859 alpha/beta hydrolase fold Acav_3925 PF02566 OsmC-like protein Acav_3926 PF02311 AraC-like ligand binding domain Acav_3926 PF12833 Helix-turn-helix domain Acav_3928 PF03466 LysR substrate binding domain Acav_3928 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3929 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3930 PF12911 N-terminal TM domain of oligopeptide transport permease C Acav_3930 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3931 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Acav_3931 PF00005 ABC transporter Acav_3932 PF00005 ABC transporter Acav_3932 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Acav_3934 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Acav_3934 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Acav_3935 PF13609 Gram-negative porin Acav_3937 PF02203 Tar ligand binding domain homologue Acav_3937 PF00672 HAMP domain Acav_3937 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_3938 PF12146 Serine aminopeptidase, S33 Acav_3940 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) Acav_3941 PF00361 Proton-conducting membrane transporter Acav_3941 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Acav_3942 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3942 PF03466 LysR substrate binding domain Acav_3944 PF01380 SIS domain Acav_3945 PF01037 Lrp/AsnC ligand binding domain Acav_3947 PF07689 KaiB domain Acav_3947 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_3947 PF00512 His Kinase A (phospho-acceptor) domain Acav_3948 PF12804 MobA-like NTP transferase domain Acav_3948 PF00132 Bacterial transferase hexapeptide (six repeats) Acav_3949 PF13545 Crp-like helix-turn-helix domain Acav_3949 PF00027 Cyclic nucleotide-binding domain Acav_3953 PF03466 LysR substrate binding domain Acav_3953 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3954 PF03171 2OG-Fe(II) oxygenase superfamily Acav_3954 PF14226 non-haem dioxygenase in morphine synthesis N-terminal Acav_3956 PF02608 ABC transporter substrate-binding protein PnrA-like Acav_3957 PF00005 ABC transporter Acav_3963 PF03702 Anhydro-N-acetylmuramic acid kinase Acav_3964 PF07690 Major Facilitator Superfamily Acav_3965 PF01521 Iron-sulphur cluster biosynthesis Acav_3968 PF00380 Ribosomal protein S9/S16 Acav_3969 PF00572 Ribosomal protein L13 Acav_3970 PF08308 PEGA domain Acav_3970 PF00069 Protein kinase domain Acav_3971 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Acav_3972 PF03330 Lytic transglycolase Acav_3974 PF02219 Methylenetetrahydrofolate reductase Acav_3975 PF01479 S4 domain Acav_3975 PF01728 FtsJ-like methyltransferase Acav_3976 PF05221 S-adenosyl-L-homocysteine hydrolase Acav_3976 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Acav_3977 PF01757 Acyltransferase family Acav_3978 PF16658 Class II release factor RF3, C-terminal domain Acav_3978 PF00009 Elongation factor Tu GTP binding domain Acav_3978 PF03144 Elongation factor Tu domain 2 Acav_3980 PF00892 EamA-like transporter family Acav_3983 PF03401 Tripartite tricarboxylate transporter family receptor Acav_3985 PF00005 ABC transporter Acav_3986 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3987 PF00528 Binding-protein-dependent transport system inner membrane component Acav_3988 PF00497 Bacterial extracellular solute-binding proteins, family 3 Acav_3990 PF03466 LysR substrate binding domain Acav_3990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_3991 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Acav_3992 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Acav_3993 PF03480 Bacterial extracellular solute-binding protein, family 7 Acav_3994 PF00664 ABC transporter transmembrane region Acav_3994 PF00005 ABC transporter Acav_3995 PF03061 Thioesterase superfamily Acav_3997 PF03401 Tripartite tricarboxylate transporter family receptor Acav_3998 PF00378 Enoyl-CoA hydratase/isomerase Acav_4000 PF02803 Thiolase, C-terminal domain Acav_4000 PF00108 Thiolase, N-terminal domain Acav_4002 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Acav_4002 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Acav_4002 PF00378 Enoyl-CoA hydratase/isomerase Acav_4004 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_4004 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_4004 PF12806 Acetyl-CoA dehydrogenase C-terminal like Acav_4004 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_4006 PF00440 Bacterial regulatory proteins, tetR family Acav_4007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4007 PF00512 His Kinase A (phospho-acceptor) domain Acav_4008 PF00072 Response regulator receiver domain Acav_4008 PF00486 Transcriptional regulatory protein, C terminal Acav_4009 PF00696 Amino acid kinase family Acav_4015 PF00005 ABC transporter Acav_4020 PF00263 Bacterial type II and III secretion system protein Acav_4020 PF03958 Bacterial type II/III secretion system short domain Acav_4026 PF07963 Prokaryotic N-terminal methylation motif Acav_4028 PF08334 Type II secretion system (T2SS), protein G Acav_4028 PF07963 Prokaryotic N-terminal methylation motif Acav_4029 PF00482 Type II secretion system (T2SS), protein F Acav_4030 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Acav_4030 PF00437 Type II/IV secretion system protein Acav_4032 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Acav_4033 PF00483 Nucleotidyl transferase Acav_4034 PF04321 RmlD substrate binding domain Acav_4035 PF16363 GDP-mannose 4,6 dehydratase Acav_4038 PF03309 Type III pantothenate kinase Acav_4039 PF04972 BON domain Acav_4039 PF01476 LysM domain Acav_4040 PF00155 Aminotransferase class I and II Acav_4040 PF00392 Bacterial regulatory proteins, gntR family Acav_4044 PF01553 Acyltransferase Acav_4047 PF05746 DALR anticodon binding domain Acav_4047 PF02092 Glycyl-tRNA synthetase beta subunit Acav_4048 PF02091 Glycyl-tRNA synthetase alpha subunit Acav_4049 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Acav_4050 PF00109 Beta-ketoacyl synthase, N-terminal domain Acav_4050 PF02801 Beta-ketoacyl synthase, C-terminal domain Acav_4051 PF07977 FabA-like domain Acav_4052 PF00710 Asparaginase, N-terminal Acav_4052 PF17763 Glutaminase/Asparaginase C-terminal domain Acav_4053 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4053 PF03466 LysR substrate binding domain Acav_4054 PF00795 Carbon-nitrogen hydrolase Acav_4055 PF03471 Transporter associated domain Acav_4055 PF00571 CBS domain Acav_4056 PF05593 RHS Repeat Acav_4056 PF03527 RHS protein Acav_4058 PF01037 Lrp/AsnC ligand binding domain Acav_4059 PF00561 alpha/beta hydrolase fold Acav_4061 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Acav_4062 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4063 PF00351 Biopterin-dependent aromatic amino acid hydroxylase Acav_4066 PF00501 AMP-binding enzyme Acav_4066 PF13193 AMP-binding enzyme C-terminal domain Acav_4067 PF13407 Periplasmic binding protein domain Acav_4068 PF00005 ABC transporter Acav_4069 PF02653 Branched-chain amino acid transport system / permease component Acav_4070 PF00356 Bacterial regulatory proteins, lacI family Acav_4071 PF00294 pfkB family carbohydrate kinase Acav_4072 PF05025 RbsD / FucU transport protein family Acav_4075 PF10145 Phage-related minor tail protein Acav_4075 PF01464 Transglycosylase SLT domain Acav_4075 PF01551 Peptidase family M23 Acav_4076 PF01812 5-formyltetrahydrofolate cyclo-ligase family Acav_4077 PF00990 Diguanylate cyclase, GGDEF domain Acav_4077 PF03707 Bacterial signalling protein N terminal repeat Acav_4077 PF00563 EAL domain Acav_4078 PF02798 Glutathione S-transferase, N-terminal domain Acav_4078 PF14497 Glutathione S-transferase, C-terminal domain Acav_4080 PF01966 HD domain Acav_4080 PF01743 Poly A polymerase head domain Acav_4080 PF12627 Probable RNA and SrmB- binding site of polymerase A Acav_4081 PF00085 Thioredoxin Acav_4082 PF02358 Trehalose-phosphatase Acav_4083 PF00723 Glycosyl hydrolases family 15 Acav_4084 PF00982 Glycosyltransferase family 20 Acav_4089 PF13193 AMP-binding enzyme C-terminal domain Acav_4089 PF00550 Phosphopantetheine attachment site Acav_4089 PF00668 Condensation domain Acav_4089 PF00501 AMP-binding enzyme Acav_4091 PF00583 Acetyltransferase (GNAT) family Acav_4092 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Acav_4093 PF00202 Aminotransferase class-III Acav_4094 PF00282 Pyridoxal-dependent decarboxylase conserved domain Acav_4095 PF00497 Bacterial extracellular solute-binding proteins, family 3 Acav_4097 PF00528 Binding-protein-dependent transport system inner membrane component Acav_4098 PF00005 ABC transporter Acav_4100 PF02668 Taurine catabolism dioxygenase TauD, TfdA family Acav_4101 PF02668 Taurine catabolism dioxygenase TauD, TfdA family Acav_4103 PF00528 Binding-protein-dependent transport system inner membrane component Acav_4104 PF00528 Binding-protein-dependent transport system inner membrane component Acav_4105 PF00005 ABC transporter Acav_4105 PF03459 TOBE domain Acav_4105 PF17912 MalK OB fold domain Acav_4109 PF04328 Selenoprotein, putative Acav_4110 PF02554 Carbon starvation protein CstA Acav_4110 PF13722 5TM C-terminal transporter carbon starvation CstA Acav_4111 PF00196 Bacterial regulatory proteins, luxR family Acav_4111 PF00072 Response regulator receiver domain Acav_4112 PF07730 Histidine kinase Acav_4112 PF17200 Single Cache domain 2 Acav_4113 PF01171 PP-loop family Acav_4115 PF00300 Histidine phosphatase superfamily (branch 1) Acav_4116 PF01168 Alanine racemase, N-terminal domain Acav_4116 PF14031 Putative serine dehydratase domain Acav_4120 PF05496 Holliday junction DNA helicase RuvB P-loop domain Acav_4120 PF05491 RuvB C-terminal winged helix domain Acav_4120 PF17864 RuvB AAA lid domain Acav_4123 PF07499 RuvA, C-terminal domain Acav_4123 PF01330 RuvA N terminal domain Acav_4124 PF02562 PhoH-like protein Acav_4129 PF02130 Uncharacterized protein family UPF0054 Acav_4130 PF02580 D-Tyr-tRNA(Tyr) deacylase Acav_4131 PF16916 Dimerisation domain of Zinc Transporter Acav_4131 PF01545 Cation efflux family Acav_4132 PF04909 Amidohydrolase Acav_4134 PF00392 Bacterial regulatory proteins, gntR family Acav_4134 PF07702 UTRA domain Acav_4135 PF00270 DEAD/DEAH box helicase Acav_4135 PF03880 DbpA RNA binding domain Acav_4135 PF00271 Helicase conserved C-terminal domain Acav_4136 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus Acav_4136 PF01048 Phosphorylase superfamily Acav_4137 PF05230 MASE2 domain Acav_4137 PF00990 Diguanylate cyclase, GGDEF domain Acav_4138 PF13609 Gram-negative porin Acav_4139 PF07690 Major Facilitator Superfamily Acav_4141 PF00775 Dioxygenase Acav_4141 PF04444 Catechol dioxygenase N terminus Acav_4142 PF00465 Iron-containing alcohol dehydrogenase Acav_4143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4143 PF03466 LysR substrate binding domain Acav_4146 PF01613 Flavin reductase like domain Acav_4150 PF08501 Shikimate dehydrogenase substrate binding domain Acav_4151 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Acav_4152 PF00294 pfkB family carbohydrate kinase Acav_4153 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Acav_4153 PF00391 PEP-utilising enzyme, mobile domain Acav_4153 PF02896 PEP-utilising enzyme, TIM barrel domain Acav_4153 PF05524 PEP-utilising enzyme, N-terminal Acav_4153 PF00381 PTS HPr component phosphorylation site Acav_4154 PF00356 Bacterial regulatory proteins, lacI family Acav_4157 PF00012 Hsp70 protein Acav_4158 PF00082 Subtilase family Acav_4159 PF02222 ATP-grasp domain Acav_4162 PF02525 Flavodoxin-like fold Acav_4163 PF03466 LysR substrate binding domain Acav_4163 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4164 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Acav_4164 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Acav_4165 PF01614 Bacterial transcriptional regulator Acav_4165 PF09339 IclR helix-turn-helix domain Acav_4166 PF01613 Flavin reductase like domain Acav_4167 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4168 PF01042 Endoribonuclease L-PSP Acav_4169 PF04909 Amidohydrolase Acav_4170 PF01557 Fumarylacetoacetate (FAA) hydrolase family Acav_4171 PF01557 Fumarylacetoacetate (FAA) hydrolase family Acav_4172 PF03328 HpcH/HpaI aldolase/citrate lyase family Acav_4173 PF01047 MarR family Acav_4174 PF02566 OsmC-like protein Acav_4176 PF00069 Protein kinase domain Acav_4176 PF03793 PASTA domain Acav_4177 PF01636 Phosphotransferase enzyme family Acav_4178 PF00486 Transcriptional regulatory protein, C terminal Acav_4178 PF00072 Response regulator receiver domain Acav_4181 PF17149 Periplasmic sensor domain found in signal transduction proteins Acav_4181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4181 PF00672 HAMP domain Acav_4181 PF01627 Hpt domain Acav_4181 PF00072 Response regulator receiver domain Acav_4181 PF00512 His Kinase A (phospho-acceptor) domain Acav_4190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4190 PF00183 Hsp90 protein Acav_4191 PF00072 Response regulator receiver domain Acav_4191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4191 PF13188 PAS domain Acav_4191 PF08448 PAS fold Acav_4191 PF00512 His Kinase A (phospho-acceptor) domain Acav_4192 PF01479 S4 domain Acav_4192 PF00849 RNA pseudouridylate synthase Acav_4193 PF00990 Diguanylate cyclase, GGDEF domain Acav_4193 PF03707 Bacterial signalling protein N terminal repeat Acav_4193 PF00563 EAL domain Acav_4195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_4195 PF02203 Tar ligand binding domain homologue Acav_4195 PF00672 HAMP domain Acav_4196 PF00027 Cyclic nucleotide-binding domain Acav_4196 PF13545 Crp-like helix-turn-helix domain Acav_4197 PF02837 Glycosyl hydrolases family 2, sugar binding domain Acav_4197 PF00703 Glycosyl hydrolases family 2 Acav_4197 PF16990 Carbohydrate binding module (family 35) Acav_4197 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain Acav_4198 PF00291 Pyridoxal-phosphate dependent enzyme Acav_4199 PF03372 Endonuclease/Exonuclease/phosphatase family Acav_4200 PF13091 PLD-like domain Acav_4201 PF03706 Lysylphosphatidylglycerol synthase TM region Acav_4204 PF02203 Tar ligand binding domain homologue Acav_4204 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_4204 PF00672 HAMP domain Acav_4205 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4206 PF00596 Class II Aldolase and Adducin N-terminal domain Acav_4207 PF01012 Electron transfer flavoprotein domain Acav_4207 PF00766 Electron transfer flavoprotein FAD-binding domain Acav_4208 PF01012 Electron transfer flavoprotein domain Acav_4209 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4210 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4211 PF02515 CoA-transferase family III Acav_4212 PF00378 Enoyl-CoA hydratase/isomerase Acav_4213 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_4213 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_4213 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_4214 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_4214 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_4214 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_4215 PF00378 Enoyl-CoA hydratase/isomerase Acav_4215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Acav_4215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Acav_4216 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4216 PF03466 LysR substrate binding domain Acav_4217 PF01810 LysE type translocator Acav_4218 PF01037 Lrp/AsnC ligand binding domain Acav_4219 PF01435 Peptidase family M48 Acav_4222 PF01979 Amidohydrolase family Acav_4223 PF00512 His Kinase A (phospho-acceptor) domain Acav_4223 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4223 PF00672 HAMP domain Acav_4224 PF00486 Transcriptional regulatory protein, C terminal Acav_4224 PF00072 Response regulator receiver domain Acav_4227 PF00005 ABC transporter Acav_4227 PF02687 FtsX-like permease family Acav_4227 PF12704 MacB-like periplasmic core domain Acav_4231 PF00892 EamA-like transporter family Acav_4233 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Acav_4236 PF00202 Aminotransferase class-III Acav_4241 PF17760 UvrA interaction domain Acav_4241 PF17755 UvrA DNA-binding domain Acav_4241 PF00005 ABC transporter Acav_4242 PF13458 Periplasmic binding protein Acav_4244 PF13609 Gram-negative porin Acav_4245 PF08946 Osmosensory transporter coiled coil Acav_4245 PF00083 Sugar (and other) transporter Acav_4246 PF01323 DSBA-like thioredoxin domain Acav_4249 PF00682 HMGL-like Acav_4250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Acav_4251 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Acav_4251 PF00289 Biotin carboxylase, N-terminal domain Acav_4251 PF00364 Biotin-requiring enzyme Acav_4251 PF02785 Biotin carboxylase C-terminal domain Acav_4253 PF00378 Enoyl-CoA hydratase/isomerase Acav_4254 PF01039 Carboxyl transferase domain Acav_4255 PF00501 AMP-binding enzyme Acav_4255 PF13193 AMP-binding enzyme C-terminal domain Acav_4258 PF13419 Haloacid dehalogenase-like hydrolase Acav_4259 PF00672 HAMP domain Acav_4259 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4259 PF17149 Periplasmic sensor domain found in signal transduction proteins Acav_4259 PF01627 Hpt domain Acav_4259 PF00512 His Kinase A (phospho-acceptor) domain Acav_4259 PF00072 Response regulator receiver domain Acav_4262 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_4262 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_4262 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_4265 PF00108 Thiolase, N-terminal domain Acav_4265 PF02803 Thiolase, C-terminal domain Acav_4266 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) Acav_4267 PF00484 Carbonic anhydrase Acav_4268 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Acav_4268 PF02770 Acyl-CoA dehydrogenase, middle domain Acav_4268 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Acav_4269 PF13411 MerR HTH family regulatory protein Acav_4271 PF00072 Response regulator receiver domain Acav_4271 PF01339 CheB methylesterase Acav_4272 PF03975 CheD chemotactic sensory transduction Acav_4273 PF01739 CheR methyltransferase, SAM binding domain Acav_4273 PF03705 CheR methyltransferase, all-alpha domain Acav_4274 PF01584 CheW-like domain Acav_4275 PF09078 CheY binding Acav_4275 PF01627 Hpt domain Acav_4275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4275 PF02895 Signal transducing histidine kinase, homodimeric domain Acav_4275 PF01584 CheW-like domain Acav_4276 PF00072 Response regulator receiver domain Acav_4278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4278 PF07730 Histidine kinase Acav_4278 PF05231 MASE1 Acav_4279 PF00196 Bacterial regulatory proteins, luxR family Acav_4279 PF00072 Response regulator receiver domain Acav_4280 PF01311 Bacterial export proteins, family 1 Acav_4281 PF01313 Bacterial export proteins, family 3 Acav_4282 PF00813 FliP family Acav_4284 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Acav_4284 PF16973 Flagellar motor switch protein FliN N-terminal Acav_4285 PF02154 Flagellar motor switch protein FliM Acav_4285 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Acav_4286 PF03748 Flagellar basal body-associated protein FliL Acav_4289 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Acav_4289 PF18269 T3SS EscN ATPase C-terminal domain Acav_4291 PF14842 FliG N-terminal domain Acav_4291 PF01706 FliG C-terminal domain Acav_4291 PF14841 FliG middle domain Acav_4292 PF01514 Secretory protein of YscJ/FliF family Acav_4292 PF08345 Flagellar M-ring protein C-terminal Acav_4295 PF02561 Flagellar protein FliS Acav_4296 PF02465 Flagellar hook-associated protein 2 N-terminus Acav_4296 PF07195 Flagellar hook-associated protein 2 C-terminus Acav_4296 PF07196 Flagellin hook IN motif Acav_4297 PF00700 Bacterial flagellin C-terminal helical region Acav_4297 PF00669 Bacterial flagellin N-terminal helical region Acav_4298 PF00700 Bacterial flagellin C-terminal helical region Acav_4298 PF00669 Bacterial flagellin N-terminal helical region Acav_4299 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Acav_4302 PF00535 Glycosyl transferase family 2 Acav_4303 PF01618 MotA/TolQ/ExbB proton channel family Acav_4304 PF00691 OmpA family Acav_4304 PF13677 Membrane MotB of proton-channel complex MotA/MotB Acav_4305 PF00072 Response regulator receiver domain Acav_4306 PF04344 Chemotaxis phosphatase, CheZ Acav_4307 PF01312 FlhB HrpN YscU SpaS Family Acav_4308 PF00771 FHIPEP family Acav_4309 PF00448 SRP54-type protein, GTPase domain Acav_4311 PF04542 Sigma-70 region 2 Acav_4311 PF04539 Sigma-70 region 3 Acav_4311 PF04545 Sigma-70, region 4 Acav_4315 PF00460 Flagella basal body rod protein Acav_4316 PF00460 Flagella basal body rod protein Acav_4316 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Acav_4317 PF03963 Flagellar hook capping protein - N-terminal region Acav_4317 PF13861 FlgD Tudor-like domain Acav_4317 PF13860 FlgD Ig-like domain Acav_4318 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Acav_4318 PF00460 Flagella basal body rod protein Acav_4318 PF07559 Flagellar basal body protein FlaE Acav_4319 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Acav_4319 PF00460 Flagella basal body rod protein Acav_4320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Acav_4320 PF00460 Flagella basal body rod protein Acav_4321 PF02107 Flagellar L-ring protein Acav_4322 PF02119 Flagellar P-ring protein Acav_4323 PF10135 Rod binding protein Acav_4323 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Acav_4324 PF00460 Flagella basal body rod protein Acav_4324 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Acav_4325 PF00700 Bacterial flagellin C-terminal helical region Acav_4325 PF00669 Bacterial flagellin N-terminal helical region Acav_4327 PF00155 Aminotransferase class I and II Acav_4327 PF00392 Bacterial regulatory proteins, gntR family Acav_4329 PF00892 EamA-like transporter family Acav_4330 PF00155 Aminotransferase class I and II Acav_4331 PF00043 Glutathione S-transferase, C-terminal domain Acav_4331 PF13417 Glutathione S-transferase, N-terminal domain Acav_4332 PF02567 Phenazine biosynthesis-like protein Acav_4334 PF01810 LysE type translocator Acav_4335 PF00291 Pyridoxal-phosphate dependent enzyme Acav_4338 PF00672 HAMP domain Acav_4338 PF02203 Tar ligand binding domain homologue Acav_4338 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_4344 PF01970 Tripartite tricarboxylate transporter TctA family Acav_4345 PF03466 LysR substrate binding domain Acav_4345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4346 PF00107 Zinc-binding dehydrogenase Acav_4346 PF08240 Alcohol dehydrogenase GroES-like domain Acav_4347 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Acav_4347 PF01411 tRNA synthetases class II (A) Acav_4347 PF02272 DHHA1 domain Acav_4355 PF03741 Integral membrane protein TerC family Acav_4356 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4356 PF03466 LysR substrate binding domain Acav_4358 PF00873 AcrB/AcrD/AcrF family Acav_4361 PF02321 Outer membrane efflux protein Acav_4363 PF00884 Sulfatase Acav_4363 PF16385 Domain of unknown function Acav_4364 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4366 PF01208 Uroporphyrinogen decarboxylase (URO-D) Acav_4367 PF00270 DEAD/DEAH box helicase Acav_4367 PF17764 3′ DNA-binding domain (3′BD) Acav_4367 PF18074 Primosomal protein N C-terminal domain Acav_4367 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Acav_4367 PF00271 Helicase conserved C-terminal domain Acav_4371 PF00580 UvrD/REP helicase N-terminal domain Acav_4371 PF13361 UvrD-like helicase C-terminal domain Acav_4372 PF02253 Phospholipase A1 Acav_4374 PF00582 Universal stress protein family Acav_4375 PF01702 Queuine tRNA-ribosyltransferase Acav_4379 PF08447 PAS fold Acav_4379 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_4379 PF13426 PAS domain Acav_4386 PF01037 Lrp/AsnC ligand binding domain Acav_4387 PF00291 Pyridoxal-phosphate dependent enzyme Acav_4388 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4389 PF00672 HAMP domain Acav_4389 PF02203 Tar ligand binding domain homologue Acav_4389 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_4407 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4408 PF13454 FAD-NAD(P)-binding Acav_4410 PF01266 FAD dependent oxidoreductase Acav_4414 PF13350 Tyrosine phosphatase family Acav_4418 PF00528 Binding-protein-dependent transport system inner membrane component Acav_4419 PF00005 ABC transporter Acav_4422 PF04244 Deoxyribodipyrimidine photo-lyase-related protein Acav_4423 PF01381 Helix-turn-helix Acav_4423 PF00717 Peptidase S24-like Acav_4424 PF07804 HipA-like C-terminal domain Acav_4424 PF13657 HipA N-terminal domain Acav_4425 PF04545 Sigma-70, region 4 Acav_4425 PF04539 Sigma-70 region 3 Acav_4425 PF04542 Sigma-70 region 2 Acav_4425 PF00140 Sigma-70 factor, region 1.2 Acav_4425 PF03979 Sigma-70 factor, region 1.1 Acav_4425 PF04546 Sigma-70, non-essential region Acav_4426 PF01119 DNA mismatch repair protein, C-terminal domain Acav_4426 PF08676 MutL C terminal dimerisation domain Acav_4430 PF03852 DNA mismatch endonuclease Vsr Acav_4431 PF00145 C-5 cytosine-specific DNA methylase Acav_4434 PF07995 Glucose / Sorbosone dehydrogenase Acav_4435 PF00080 Copper/zinc superoxide dismutase (SODC) Acav_4436 PF00384 Molybdopterin oxidoreductase Acav_4439 PF13657 HipA N-terminal domain Acav_4439 PF07804 HipA-like C-terminal domain Acav_4441 PF02954 Bacterial regulatory protein, Fis family Acav_4441 PF00072 Response regulator receiver domain Acav_4441 PF00158 Sigma-54 interaction domain Acav_4442 PF00989 PAS fold Acav_4442 PF00672 HAMP domain Acav_4442 PF00512 His Kinase A (phospho-acceptor) domain Acav_4442 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4444 PF01189 16S rRNA methyltransferase RsmB/F Acav_4444 PF01029 NusB family Acav_4446 PF04983 RNA polymerase Rpb1, domain 3 Acav_4446 PF04997 RNA polymerase Rpb1, domain 1 Acav_4446 PF04998 RNA polymerase Rpb1, domain 5 Acav_4446 PF05000 RNA polymerase Rpb1, domain 4 Acav_4446 PF00623 RNA polymerase Rpb1, domain 2 Acav_4447 PF00562 RNA polymerase Rpb2, domain 6 Acav_4447 PF04560 RNA polymerase Rpb2, domain 7 Acav_4447 PF10385 RNA polymerase beta subunit external 1 domain Acav_4447 PF04565 RNA polymerase Rpb2, domain 3 Acav_4447 PF04561 RNA polymerase Rpb2, domain 2 Acav_4447 PF04563 RNA polymerase beta subunit Acav_4448 PF16320 Ribosomal protein L7/L12 dimerisation domain Acav_4448 PF00542 Ribosomal protein L7/L12 C-terminal domain Acav_4449 PF00466 Ribosomal protein L10 Acav_4451 PF00687 Ribosomal protein L1p/L10e family Acav_4452 PF03946 Ribosomal protein L11, N-terminal domain Acav_4452 PF00298 Ribosomal protein L11, RNA binding domain Acav_4453 PF00467 KOW motif Acav_4453 PF02357 Transcription termination factor nusG Acav_4454 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Acav_4455 PF00009 Elongation factor Tu GTP binding domain Acav_4455 PF03143 Elongation factor Tu C-terminal domain Acav_4455 PF03144 Elongation factor Tu domain 2 Acav_4456 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Acav_4456 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Acav_4457 PF03594 Benzoate membrane transport protein Acav_4458 PF02705 K+ potassium transporter Acav_4460 PF02386 Cation transport protein Acav_4461 PF02080 TrkA-C domain Acav_4461 PF02254 TrkA-N domain Acav_4462 PF00171 Aldehyde dehydrogenase family Acav_4464 PF00795 Carbon-nitrogen hydrolase Acav_4465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4465 PF03466 LysR substrate binding domain Acav_4468 PF09334 tRNA synthetases class I (M) Acav_4468 PF13603 Leucyl-tRNA synthetase, Domain 2 Acav_4468 PF00133 tRNA synthetases class I (I, L, M and V) Acav_4468 PF08264 Anticodon-binding domain of tRNA Acav_4470 PF00990 Diguanylate cyclase, GGDEF domain Acav_4470 PF00563 EAL domain Acav_4470 PF13188 PAS domain Acav_4470 PF03707 Bacterial signalling protein N terminal repeat Acav_4471 PF02472 Biopolymer transport protein ExbD/TolR Acav_4472 PF01618 MotA/TolQ/ExbB proton channel family Acav_4474 PF04355 SmpA / OmlA family Acav_4475 PF01475 Ferric uptake regulator family Acav_4476 PF07475 HPr Serine kinase C-terminal domain Acav_4476 PF02603 HPr Serine kinase N terminus Acav_4477 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Acav_4478 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Acav_4479 PF01259 SAICAR synthetase Acav_4481 PF00085 Thioredoxin Acav_4482 PF00731 AIR carboxylase Acav_4483 PF02222 ATP-grasp domain Acav_4483 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Acav_4484 PF01300 Telomere recombination Acav_4484 PF03481 Putative GTP-binding controlling metal-binding Acav_4489 PF00814 Glycoprotease family Acav_4492 PF01544 CorA-like Mg2+ transporter protein Acav_4493 PF01048 Phosphorylase superfamily Acav_4494 PF13193 AMP-binding enzyme C-terminal domain Acav_4494 PF00501 AMP-binding enzyme Acav_4496 PF01116 Fructose-bisphosphate aldolase class-II Acav_4497 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4497 PF00512 His Kinase A (phospho-acceptor) domain Acav_4498 PF00072 Response regulator receiver domain Acav_4498 PF00486 Transcriptional regulatory protein, C terminal Acav_4501 PF02887 Pyruvate kinase, alpha/beta domain Acav_4501 PF00224 Pyruvate kinase, barrel domain Acav_4502 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4502 PF00672 HAMP domain Acav_4502 PF00512 His Kinase A (phospho-acceptor) domain Acav_4503 PF00072 Response regulator receiver domain Acav_4503 PF00486 Transcriptional regulatory protein, C terminal Acav_4505 PF01032 FecCD transport family Acav_4506 PF00005 ABC transporter Acav_4507 PF00127 Copper binding proteins, plastocyanin/azurin family Acav_4508 PF00557 Metallopeptidase family M24 Acav_4508 PF05195 Aminopeptidase P, N-terminal domain Acav_4512 PF15975 Flotillin Acav_4512 PF01145 SPFH domain / Band 7 family Acav_4513 PF00483 Nucleotidyl transferase Acav_4514 PF02675 S-adenosylmethionine decarboxylase Acav_4515 PF02779 Transketolase, pyrimidine binding domain Acav_4515 PF00456 Transketolase, thiamine diphosphate binding domain Acav_4515 PF02780 Transketolase, C-terminal domain Acav_4518 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Acav_4518 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Acav_4520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4520 PF03466 LysR substrate binding domain Acav_4522 PF00691 OmpA family Acav_4522 PF05736 OprF membrane domain Acav_4527 PF07722 Peptidase C26 Acav_4534 PF02678 Pirin Acav_4534 PF05726 Pirin C-terminal cupin domain Acav_4538 PF00924 Mechanosensitive ion channel Acav_4540 PF00884 Sulfatase Acav_4541 PF00106 short chain dehydrogenase Acav_4546 PF13361 UvrD-like helicase C-terminal domain Acav_4546 PF00580 UvrD/REP helicase N-terminal domain Acav_4551 PF06271 RDD family Acav_4556 PF01751 Toprim domain Acav_4556 PF01131 DNA topoisomerase Acav_4558 PF08279 HTH domain Acav_4558 PF02237 Biotin protein ligase C terminal domain Acav_4558 PF03099 Biotin/lipoate A/B protein ligase family Acav_4563 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4566 PF02743 Cache domain Acav_4566 PF00211 Adenylate and Guanylate cyclase catalytic domain Acav_4566 PF00672 HAMP domain Acav_4569 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4569 PF00512 His Kinase A (phospho-acceptor) domain Acav_4569 PF08521 Two-component sensor kinase N-terminal Acav_4570 PF00486 Transcriptional regulatory protein, C terminal Acav_4570 PF00072 Response regulator receiver domain Acav_4572 PF00154 recA bacterial DNA recombination protein Acav_4573 PF02631 RecX family Acav_4575 PF02355 Protein export membrane protein Acav_4575 PF07549 SecD/SecF GG Motif Acav_4576 PF02355 Protein export membrane protein Acav_4576 PF13721 SecD export protein N-terminal TM region Acav_4576 PF07549 SecD/SecF GG Motif Acav_4577 PF02699 Preprotein translocase subunit Acav_4582 PF01037 Lrp/AsnC ligand binding domain Acav_4584 PF05977 Transmembrane secretion effector Acav_4587 PF03562 MltA specific insert domain Acav_4587 PF06725 3D domain Acav_4588 PF00691 OmpA family Acav_4588 PF04972 BON domain Acav_4589 PF00072 Response regulator receiver domain Acav_4589 PF00196 Bacterial regulatory proteins, luxR family Acav_4590 PF00512 His Kinase A (phospho-acceptor) domain Acav_4590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4590 PF00989 PAS fold Acav_4591 PF00795 Carbon-nitrogen hydrolase Acav_4593 PF03710 Glutamate-ammonia ligase adenylyltransferase Acav_4593 PF08335 GlnD PII-uridylyltransferase Acav_4594 PF00501 AMP-binding enzyme Acav_4594 PF00550 Phosphopantetheine attachment site Acav_4594 PF00975 Thioesterase domain Acav_4594 PF13193 AMP-binding enzyme C-terminal domain Acav_4594 PF00668 Condensation domain Acav_4597 PF00440 Bacterial regulatory proteins, tetR family Acav_4597 PF08361 MAATS-type transcriptional repressor, C-terminal region Acav_4598 PF02321 Outer membrane efflux protein Acav_4599 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Acav_4600 PF00873 AcrB/AcrD/AcrF family Acav_4602 PF11871 Domain of unknown function (DUF3391) Acav_4602 PF01966 HD domain Acav_4603 PF00255 Glutathione peroxidase Acav_4604 PF00043 Glutathione S-transferase, C-terminal domain Acav_4604 PF13417 Glutathione S-transferase, N-terminal domain Acav_4605 PF00206 Lyase Acav_4605 PF08328 Adenylosuccinate lyase C-terminal Acav_4606 PF07152 YaeQ protein Acav_4609 PF03741 Integral membrane protein TerC family Acav_4611 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Acav_4612 PF13181 Tetratricopeptide repeat Acav_4612 PF01435 Peptidase family M48 Acav_4613 PF01967 MoaC family Acav_4617 PF04932 O-Antigen ligase Acav_4617 PF15864 Protein glycosylation ligase Acav_4617 PF11846 Virulence factor membrane-bound polymerase, C-terminal Acav_4618 PF00114 Pilin (bacterial filament) Acav_4618 PF07963 Prokaryotic N-terminal methylation motif Acav_4619 PF12773 Double zinc ribbon Acav_4619 PF00498 FHA domain Acav_4621 PF03741 Integral membrane protein TerC family Acav_4622 PF02629 CoA binding domain Acav_4622 PF00549 CoA-ligase Acav_4623 PF08442 ATP-grasp domain Acav_4623 PF00549 CoA-ligase Acav_4624 PF01118 Semialdehyde dehydrogenase, NAD binding domain Acav_4625 PF17782 DprA winged helix domain Acav_4625 PF02481 DNA recombination-mediator protein A Acav_4627 PF01327 Polypeptide deformylase Acav_4629 PF00551 Formyl transferase Acav_4629 PF02911 Formyl transferase, C-terminal domain Acav_4632 PF00162 Phosphoglycerate kinase Acav_4633 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Acav_4636 PF03466 LysR substrate binding domain Acav_4636 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4637 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4639 PF00893 Small Multidrug Resistance protein Acav_4640 PF00892 EamA-like transporter family Acav_4641 PF02203 Tar ligand binding domain homologue Acav_4641 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Acav_4641 PF00672 HAMP domain Acav_4644 PF03466 LysR substrate binding domain Acav_4644 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4645 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4646 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Acav_4647 PF13378 Enolase C-terminal domain-like Acav_4647 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Acav_4648 PF00701 Dihydrodipicolinate synthetase family Acav_4649 PF03480 Bacterial extracellular solute-binding protein, family 7 Acav_4650 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Acav_4651 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Acav_4653 PF03480 Bacterial extracellular solute-binding protein, family 7 Acav_4656 PF00356 Bacterial regulatory proteins, lacI family Acav_4658 PF00005 ABC transporter Acav_4658 PF17912 MalK OB fold domain Acav_4660 PF00528 Binding-protein-dependent transport system inner membrane component Acav_4661 PF00528 Binding-protein-dependent transport system inner membrane component Acav_4662 PF08450 SMP-30/Gluconolactonase/LRE-like region Acav_4664 PF00171 Aldehyde dehydrogenase family Acav_4665 PF17755 UvrA DNA-binding domain Acav_4665 PF17760 UvrA interaction domain Acav_4668 PF07690 Major Facilitator Superfamily Acav_4669 PF00654 Voltage gated chloride channel Acav_4670 PF00436 Single-strand binding protein family Acav_4671 PF18766 SWI2/SNF2 ATPase Acav_4671 PF11867 Domain of unknown function (DUF3387) Acav_4671 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Acav_4672 PF02661 Fic/DOC family Acav_4672 PF13784 Fic/DOC family N-terminal Acav_4676 PF01420 Type I restriction modification DNA specificity domain Acav_4677 PF02384 N-6 DNA Methylase Acav_4678 PF03466 LysR substrate binding domain Acav_4678 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4680 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4682 PF00563 EAL domain Acav_4682 PF12792 CSS motif domain associated with EAL Acav_4683 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4683 PF03466 LysR substrate binding domain Acav_4689 PF04143 Sulphur transport Acav_4691 PF00753 Metallo-beta-lactamase superfamily Acav_4693 PF13185 GAF domain Acav_4693 PF00563 EAL domain Acav_4693 PF00990 Diguanylate cyclase, GGDEF domain Acav_4696 PF00501 AMP-binding enzyme Acav_4696 PF13193 AMP-binding enzyme C-terminal domain Acav_4697 PF03401 Tripartite tricarboxylate transporter family receptor Acav_4699 PF02652 L-lactate permease Acav_4700 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Acav_4700 PF00722 Glycosyl hydrolases family 16 Acav_4705 PF00293 NUDIX domain Acav_4705 PF13344 Haloacid dehalogenase-like hydrolase Acav_4707 PF03466 LysR substrate binding domain Acav_4707 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4710 PF00990 Diguanylate cyclase, GGDEF domain Acav_4710 PF08448 PAS fold Acav_4711 PF00677 Lumazine binding domain Acav_4712 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acav_4712 PF00072 Response regulator receiver domain Acav_4712 PF13188 PAS domain Acav_4712 PF08448 PAS fold Acav_4712 PF00512 His Kinase A (phospho-acceptor) domain Acav_4715 PF08021 Siderophore-interacting FAD-binding domain Acav_4715 PF04954 Siderophore-interacting protein Acav_4716 PF03551 Transcriptional regulator PadR-like family Acav_4720 PF07715 TonB-dependent Receptor Plug Domain Acav_4720 PF00593 TonB dependent receptor Acav_4732 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Acav_4732 PF03466 LysR substrate binding domain Acav_4733 PF00202 Aminotransferase class-III Acav_4735 PF00171 Aldehyde dehydrogenase family Acav_4737 PF00072 Response regulator receiver domain Acav_4737 PF00990 Diguanylate cyclase, GGDEF domain Acav_4738 PF00392 Bacterial regulatory proteins, gntR family Acav_4738 PF07729 FCD domain Acav_4740 PF02653 Branched-chain amino acid transport system / permease component Acav_4741 PF11862 Domain of unknown function (DUF3382) Acav_4741 PF02653 Branched-chain amino acid transport system / permease component Acav_4742 PF12399 Branched-chain amino acid ATP-binding cassette transporter Acav_4742 PF00005 ABC transporter Acav_4743 PF00005 ABC transporter Acav_4744 PF01546 Peptidase family M20/M25/M40 Acav_4744 PF07687 Peptidase dimerisation domain Acav_4745 PF07364 Metallopeptidase family M81 Acav_4745 PF07171 MlrC C-terminus Acav_4748 PF00390 Malic enzyme, N-terminal domain Acav_4748 PF03949 Malic enzyme, NAD binding domain Acav_4748 PF01515 Phosphate acetyl/butaryl transferase Acav_4749 PF00545 ribonuclease Acav_4751 PF00398 Ribosomal RNA adenine dimethylase Acav_4752 PF09312 SurA N-terminal domain Acav_4752 PF00639 PPIC-type PPIASE domain Acav_4753 PF04453 LPS transport system D Acav_4754 PF01636 Phosphotransferase enzyme family Acav_4755 PF04452 RNA methyltransferase Acav_4758 PF06470 SMC proteins Flexible Hinge Domain Acav_4758 PF02463 RecF/RecN/SMC N terminal domain Acav_4760 PF00990 Diguanylate cyclase, GGDEF domain Acav_4760 PF08448 PAS fold Acav_4761 PF07690 Major Facilitator Superfamily Acav_4765 PF13520 Amino acid permease Acav_4766 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Acav_4767 PF05985 Ethanolamine ammonia-lyase light chain (EutC) Acav_4768 PF00072 Response regulator receiver domain Acav_4768 PF00990 Diguanylate cyclase, GGDEF domain Acav_4770 PF00561 alpha/beta hydrolase fold Acav_4771 PF01169 Uncharacterized protein family UPF0016 Acav_4772 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Acav_4773 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Acav_4774 PF00106 short chain dehydrogenase Acav_4777 PF01380 SIS domain Acav_4777 PF00571 CBS domain Acav_4778 PF00999 Sodium/hydrogen exchanger family Acav_4778 PF02254 TrkA-N domain Acav_4778 PF02080 TrkA-C domain Acav_4779 PF00156 Phosphoribosyl transferase domain Acav_4780 PF00175 Oxidoreductase NAD-binding domain Acav_4780 PF00667 FAD binding domain Acav_4780 PF00258 Flavodoxin Acav_4783 PF01926 50S ribosome-binding GTPase Acav_4783 PF12631 MnmE helical domain Acav_4783 PF10396 GTP-binding protein TrmE N-terminus Acav_4786 PF01809 Putative membrane protein insertion efficiency factor Acav_4787 PF00825 Ribonuclease P Acav_4788 PF00468 Ribosomal protein L34