locus-tag class description Aave_0001 PF00308 Bacterial dnaA protein Aave_0001 PF08299 Bacterial dnaA protein helix-turn-helix Aave_0001 PF11638 DnaA N-terminal domain Aave_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Aave_0002 PF02767 DNA polymerase III beta subunit, central domain Aave_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Aave_0003 PF00204 DNA gyrase B Aave_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_0003 PF18053 DNA gyrase B subunit insert domain Aave_0003 PF00986 DNA gyrase B subunit, carboxyl terminus Aave_0003 PF01751 Toprim domain Aave_0009 PF02566 OsmC-like protein Aave_0011 PF00742 Homoserine dehydrogenase Aave_0011 PF01842 ACT domain Aave_0011 PF03447 Homoserine dehydrogenase, NAD binding domain Aave_0013 PF13307 Helicase C-terminal domain Aave_0013 PF06733 DEAD_2 Aave_0016 PF14579 Helix-hairpin-helix motif Aave_0016 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Aave_0016 PF00929 Exonuclease Aave_0016 PF07733 Bacterial DNA polymerase III alpha NTPase domain Aave_0016 PF02811 PHP domain Aave_0016 PF14480 DNA polymerase III polC-type N-terminus I Aave_0016 PF11490 DNA polymerase III polC-type N-terminus II Aave_0017 PF00155 Aminotransferase class I and II Aave_0017 PF00392 Bacterial regulatory proteins, gntR family Aave_0019 PF08502 LeuA allosteric (dimerisation) domain Aave_0019 PF00682 HMGL-like Aave_0020 PF00877 NlpC/P60 family Aave_0021 PF00793 DAHP synthetase I family Aave_0022 PF03707 Bacterial signalling protein N terminal repeat Aave_0022 PF00990 Diguanylate cyclase, GGDEF domain Aave_0022 PF00563 EAL domain Aave_0025 PF04381 Putative exonuclease, RdgC Aave_0026 PF07670 Nucleoside recognition Aave_0031 PF02803 Thiolase, C-terminal domain Aave_0031 PF00108 Thiolase, N-terminal domain Aave_0032 PF00376 MerR family regulatory protein Aave_0032 PF09278 MerR, DNA binding Aave_0034 PF00403 Heavy-metal-associated domain Aave_0035 PF02203 Tar ligand binding domain homologue Aave_0035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0035 PF00672 HAMP domain Aave_0038 PF00873 AcrB/AcrD/AcrF family Aave_0039 PF00529 HlyD membrane-fusion protein of T1SS Aave_0039 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Aave_0041 PF00072 Response regulator receiver domain Aave_0041 PF00486 Transcriptional regulatory protein, C terminal Aave_0042 PF00512 His Kinase A (phospho-acceptor) domain Aave_0042 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_0046 PF00005 ABC transporter Aave_0047 PF00528 Binding-protein-dependent transport system inner membrane component Aave_0048 PF02798 Glutathione S-transferase, N-terminal domain Aave_0048 PF00043 Glutathione S-transferase, C-terminal domain Aave_0049 PF03692 Putative zinc- or iron-chelating domain Aave_0050 PF03358 NADPH-dependent FMN reductase Aave_0051 PF13932 GidA associated domain Aave_0051 PF01134 Glucose inhibited division protein A Aave_0052 PF02527 rRNA small subunit methyltransferase G Aave_0053 PF01810 LysE type translocator Aave_0054 PF13614 AAA domain Aave_0056 PF17762 HTH domain found in ParB protein Aave_0056 PF02195 ParB-like nuclease domain Aave_0059 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_0059 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Aave_0062 PF00106 short chain dehydrogenase Aave_0063 PF01565 FAD binding domain Aave_0063 PF04030 D-arabinono-1,4-lactone oxidase Aave_0064 PF01040 UbiA prenyltransferase family Aave_0067 PF00135 Carboxylesterase family Aave_0068 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aave_0070 PF02570 Precorrin-8X methylmutase Aave_0071 PF01888 CbiD Aave_0072 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aave_0074 PF11761 Cobalamin biosynthesis central region Aave_0074 PF01890 Cobalamin synthesis G C-terminus Aave_0074 PF11760 Cobalamin synthesis G N-terminal Aave_0077 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aave_0077 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Aave_0081 PF01613 Flavin reductase like domain Aave_0085 PF03543 Yersinia/Haemophilus virulence surface antigen Aave_0093 PF01609 Transposase DDE domain Aave_0095 PF02913 FAD linked oxidases, C-terminal domain Aave_0095 PF01565 FAD binding domain Aave_0098 PF01923 Cobalamin adenosyltransferase Aave_0099 PF03061 Thioesterase superfamily Aave_0100 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Aave_0100 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Aave_0102 PF00860 Permease family Aave_0104 PF00672 HAMP domain Aave_0104 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0104 PF02203 Tar ligand binding domain homologue Aave_0106 PF00132 Bacterial transferase hexapeptide (six repeats) Aave_0110 PF12706 Beta-lactamase superfamily domain Aave_0111 PF00005 ABC transporter Aave_0112 PF00528 Binding-protein-dependent transport system inner membrane component Aave_0113 PF01494 FAD binding domain Aave_0115 PF00171 Aldehyde dehydrogenase family Aave_0116 PF01614 Bacterial transcriptional regulator Aave_0116 PF09339 IclR helix-turn-helix domain Aave_0117 PF01435 Peptidase family M48 Aave_0119 PF00501 AMP-binding enzyme Aave_0119 PF13193 AMP-binding enzyme C-terminal domain Aave_0120 PF00491 Arginase family Aave_0121 PF02423 Ornithine cyclodeaminase/mu-crystallin family Aave_0123 PF01066 CDP-alcohol phosphatidyltransferase Aave_0124 PF05209 Septum formation inhibitor MinC, N-terminal domain Aave_0124 PF03775 Septum formation inhibitor MinC, C-terminal domain Aave_0125 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aave_0126 PF03776 Septum formation topological specificity factor MinE Aave_0127 PF01613 Flavin reductase like domain Aave_0128 PF00561 alpha/beta hydrolase fold Aave_0130 PF02525 Flavodoxin-like fold Aave_0131 PF01266 FAD dependent oxidoreductase Aave_0132 PF03466 LysR substrate binding domain Aave_0132 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0133 PF00440 Bacterial regulatory proteins, tetR family Aave_0134 PF00582 Universal stress protein family Aave_0136 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0136 PF03466 LysR substrate binding domain Aave_0138 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain Aave_0138 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Aave_0139 PF06508 Queuosine biosynthesis protein QueC Aave_0141 PF04349 Periplasmic glucan biosynthesis protein, MdoG Aave_0142 PF00291 Pyridoxal-phosphate dependent enzyme Aave_0142 PF13291 ACT domain Aave_0144 PF18158 Adaptive response protein AidB N-terminal domain Aave_0144 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_0144 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_0145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0145 PF03466 LysR substrate binding domain Aave_0146 PF07883 Cupin domain Aave_0147 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aave_0148 PF14497 Glutathione S-transferase, C-terminal domain Aave_0148 PF02798 Glutathione S-transferase, N-terminal domain Aave_0149 PF07690 Major Facilitator Superfamily Aave_0151 PF02423 Ornithine cyclodeaminase/mu-crystallin family Aave_0155 PF03922 OmpW family Aave_0157 PF00271 Helicase conserved C-terminal domain Aave_0157 PF00176 SNF2 family N-terminal domain Aave_0159 PF18273 Type III R-M EcoP15I C-terminal domain Aave_0159 PF01555 DNA methylase Aave_0162 PF04851 Type III restriction enzyme, res subunit Aave_0162 PF08774 VRR-NUC domain Aave_0163 PF03466 LysR substrate binding domain Aave_0163 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0164 PF00111 2Fe-2S iron-sulfur cluster binding domain Aave_0164 PF00175 Oxidoreductase NAD-binding domain Aave_0164 PF00970 Oxidoreductase FAD-binding domain Aave_0165 PF00355 Rieske [2Fe-2S] domain Aave_0165 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Aave_0166 PF13577 SnoaL-like domain Aave_0167 PF00355 Rieske [2Fe-2S] domain Aave_0168 PF00672 HAMP domain Aave_0168 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0168 PF02203 Tar ligand binding domain homologue Aave_0169 PF07690 Major Facilitator Superfamily Aave_0172 PF00072 Response regulator receiver domain Aave_0172 PF00158 Sigma-54 interaction domain Aave_0172 PF02954 Bacterial regulatory protein, Fis family Aave_0173 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_0173 PF00512 His Kinase A (phospho-acceptor) domain Aave_0174 PF02607 B12 binding domain Aave_0174 PF02965 Vitamin B12 dependent methionine synthase, activation domain Aave_0174 PF02310 B12 binding domain Aave_0174 PF02574 Homocysteine S-methyltransferase Aave_0174 PF00809 Pterin binding enzyme Aave_0175 PF03466 LysR substrate binding domain Aave_0175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0176 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_0176 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_0176 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_0178 PF02515 CoA-transferase family III Aave_0180 PF03401 Tripartite tricarboxylate transporter family receptor Aave_0181 PF00271 Helicase conserved C-terminal domain Aave_0181 PF16124 RecQ zinc-binding Aave_0181 PF00270 DEAD/DEAH box helicase Aave_0181 PF09382 RQC domain Aave_0181 PF00570 HRDC domain Aave_0188 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Aave_0188 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Aave_0190 PF03976 Polyphosphate kinase 2 (PPK2) Aave_0191 PF01425 Amidase Aave_0192 PF07715 TonB-dependent Receptor Plug Domain Aave_0192 PF00593 TonB dependent receptor Aave_0195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0198 PF03466 LysR substrate binding domain Aave_0199 PF13378 Enolase C-terminal domain-like Aave_0199 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Aave_0200 PF03401 Tripartite tricarboxylate transporter family receptor Aave_0204 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0204 PF03466 LysR substrate binding domain Aave_0205 PF00497 Bacterial extracellular solute-binding proteins, family 3 Aave_0207 PF04115 Ureidoglycolate lyase Aave_0210 PF00528 Binding-protein-dependent transport system inner membrane component Aave_0212 PF00392 Bacterial regulatory proteins, gntR family Aave_0212 PF07729 FCD domain Aave_0214 PF02310 B12 binding domain Aave_0214 PF02607 B12 binding domain Aave_0214 PF02965 Vitamin B12 dependent methionine synthase, activation domain Aave_0214 PF00809 Pterin binding enzyme Aave_0214 PF02574 Homocysteine S-methyltransferase Aave_0217 PF01204 Trehalase Aave_0219 PF05506 Domain of unknown function (DUF756) Aave_0219 PF04185 Phosphoesterase family Aave_0220 PF03707 Bacterial signalling protein N terminal repeat Aave_0220 PF00990 Diguanylate cyclase, GGDEF domain Aave_0220 PF00563 EAL domain Aave_0224 PF00175 Oxidoreductase NAD-binding domain Aave_0224 PF00970 Oxidoreductase FAD-binding domain Aave_0225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0225 PF03466 LysR substrate binding domain Aave_0227 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0227 PF02203 Tar ligand binding domain homologue Aave_0227 PF00672 HAMP domain Aave_0228 PF03401 Tripartite tricarboxylate transporter family receptor Aave_0229 PF00512 His Kinase A (phospho-acceptor) domain Aave_0229 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_0230 PF00072 Response regulator receiver domain Aave_0230 PF02954 Bacterial regulatory protein, Fis family Aave_0230 PF00158 Sigma-54 interaction domain Aave_0231 PF01078 Magnesium chelatase, subunit ChlI Aave_0231 PF13335 Magnesium chelatase, subunit ChlI C-terminal Aave_0233 PF00543 Nitrogen regulatory protein P-II Aave_0235 PF08450 SMP-30/Gluconolactonase/LRE-like region Aave_0241 PF04717 Type VI secretion system, phage-baseplate injector Aave_0242 PF01565 FAD binding domain Aave_0244 PF13183 4Fe-4S dicluster domain Aave_0244 PF02754 Cysteine-rich domain Aave_0250 PF00255 Glutathione peroxidase Aave_0252 PF07690 Major Facilitator Superfamily Aave_0253 PF01168 Alanine racemase, N-terminal domain Aave_0253 PF00842 Alanine racemase, C-terminal domain Aave_0255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aave_0257 PF03401 Tripartite tricarboxylate transporter family receptor Aave_0259 PF00043 Glutathione S-transferase, C-terminal domain Aave_0259 PF02798 Glutathione S-transferase, N-terminal domain Aave_0260 PF02558 Ketopantoate reductase PanE/ApbA Aave_0260 PF08546 Ketopantoate reductase PanE/ApbA C terminal Aave_0262 PF18073 Rubredoxin metal binding domain Aave_0264 PF01063 Amino-transferase class IV Aave_0269 PF00535 Glycosyl transferase family 2 Aave_0271 PF03060 Nitronate monooxygenase Aave_0272 PF03466 LysR substrate binding domain Aave_0272 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0273 PF06779 Uncharacterised MFS-type transporter YbfB Aave_0274 PF00672 HAMP domain Aave_0274 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_0274 PF00512 His Kinase A (phospho-acceptor) domain Aave_0275 PF00072 Response regulator receiver domain Aave_0275 PF00486 Transcriptional regulatory protein, C terminal Aave_0276 PF07690 Major Facilitator Superfamily Aave_0280 PF01435 Peptidase family M48 Aave_0281 PF00939 Sodium:sulfate symporter transmembrane region Aave_0282 PF00753 Metallo-beta-lactamase superfamily Aave_0285 PF03466 LysR substrate binding domain Aave_0285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0286 PF07690 Major Facilitator Superfamily Aave_0287 PF00248 Aldo/keto reductase family Aave_0288 PF03372 Endonuclease/Exonuclease/phosphatase family Aave_0289 PF00156 Phosphoribosyl transferase domain Aave_0291 PF02934 GatB/GatE catalytic domain Aave_0291 PF02637 GatB domain Aave_0292 PF01425 Amidase Aave_0293 PF02686 Glu-tRNAGln amidotransferase C subunit Aave_0296 PF04093 rod shape-determining protein MreD Aave_0297 PF03717 Penicillin-binding Protein dimerisation domain Aave_0297 PF00905 Penicillin binding protein transpeptidase domain Aave_0299 PF00005 ABC transporter Aave_0300 PF00528 Binding-protein-dependent transport system inner membrane component Aave_0301 PF00497 Bacterial extracellular solute-binding proteins, family 3 Aave_0302 PF03313 Serine dehydratase alpha chain Aave_0302 PF03315 Serine dehydratase beta chain Aave_0303 PF03466 LysR substrate binding domain Aave_0303 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0304 PF01925 Sulfite exporter TauE/SafE Aave_0305 PF00732 GMC oxidoreductase Aave_0305 PF05199 GMC oxidoreductase Aave_0306 PF02405 Permease MlaE Aave_0307 PF00005 ABC transporter Aave_0311 PF01507 Phosphoadenosine phosphosulfate reductase family Aave_0312 PF05532 CsbD-like Aave_0316 PF06123 Inner membrane protein CreD Aave_0317 PF00512 His Kinase A (phospho-acceptor) domain Aave_0317 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_0317 PF00672 HAMP domain Aave_0318 PF00486 Transcriptional regulatory protein, C terminal Aave_0318 PF00072 Response regulator receiver domain Aave_0319 PF01914 MarC family integral membrane protein Aave_0321 PF01738 Dienelactone hydrolase family Aave_0322 PF07690 Major Facilitator Superfamily Aave_0323 PF02321 Outer membrane efflux protein Aave_0324 PF01047 MarR family Aave_0325 PF00958 GMP synthase C terminal domain Aave_0325 PF00117 Glutamine amidotransferase class-I Aave_0325 PF02540 NAD synthase Aave_0326 PF01544 CorA-like Mg2+ transporter protein Aave_0327 PF00490 Delta-aminolevulinic acid dehydratase Aave_0331 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Aave_0332 PF00768 D-alanyl-D-alanine carboxypeptidase Aave_0332 PF07943 Penicillin-binding protein 5, C-terminal domain Aave_0333 PF00164 Ribosomal protein S12/S23 Aave_0334 PF00177 Ribosomal protein S7p/S5e Aave_0335 PF14492 Elongation Factor G, domain II Aave_0335 PF00679 Elongation factor G C-terminus Aave_0335 PF03764 Elongation factor G, domain IV Aave_0335 PF03144 Elongation factor Tu domain 2 Aave_0335 PF00009 Elongation factor Tu GTP binding domain Aave_0336 PF03143 Elongation factor Tu C-terminal domain Aave_0336 PF03144 Elongation factor Tu domain 2 Aave_0336 PF00009 Elongation factor Tu GTP binding domain Aave_0337 PF00338 Ribosomal protein S10p/S20e Aave_0338 PF00297 Ribosomal protein L3 Aave_0339 PF00573 Ribosomal protein L4/L1 family Aave_0340 PF00276 Ribosomal protein L23 Aave_0341 PF00181 Ribosomal Proteins L2, RNA binding domain Aave_0341 PF03947 Ribosomal Proteins L2, C-terminal domain Aave_0342 PF00203 Ribosomal protein S19 Aave_0343 PF00237 Ribosomal protein L22p/L17e Aave_0344 PF07650 KH domain Aave_0344 PF00189 Ribosomal protein S3, C-terminal domain Aave_0345 PF00252 Ribosomal protein L16p/L10e Aave_0346 PF00831 Ribosomal L29 protein Aave_0347 PF00366 Ribosomal protein S17 Aave_0348 PF08534 Redoxin Aave_0350 PF00578 AhpC/TSA family Aave_0353 PF00381 PTS HPr component phosphorylation site Aave_0354 PF02896 PEP-utilising enzyme, TIM barrel domain Aave_0354 PF00391 PEP-utilising enzyme, mobile domain Aave_0354 PF05524 PEP-utilising enzyme, N-terminal Aave_0355 PF03814 Potassium-transporting ATPase A subunit Aave_0357 PF02669 K+-transporting ATPase, c chain Aave_0358 PF02702 Osmosensitive K+ channel His kinase sensor domain Aave_0358 PF00512 His Kinase A (phospho-acceptor) domain Aave_0358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_0358 PF13492 GAF domain Aave_0358 PF13493 Domain of unknown function (DUF4118) Aave_0359 PF00486 Transcriptional regulatory protein, C terminal Aave_0359 PF00072 Response regulator receiver domain Aave_0362 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Aave_0362 PF04055 Radical SAM superfamily Aave_0363 PF03099 Biotin/lipoate A/B protein ligase family Aave_0364 PF04359 Protein of unknown function (DUF493) Aave_0366 PF00119 ATP synthase A chain Aave_0367 PF00137 ATP synthase subunit C Aave_0368 PF00430 ATP synthase B/B' CF(0) Aave_0369 PF00213 ATP synthase delta (OSCP) subunit Aave_0370 PF02874 ATP synthase alpha/beta family, beta-barrel domain Aave_0370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aave_0370 PF00306 ATP synthase alpha/beta chain, C terminal domain Aave_0371 PF00231 ATP synthase Aave_0372 PF02874 ATP synthase alpha/beta family, beta-barrel domain Aave_0372 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aave_0373 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Aave_0374 PF04679 ATP dependent DNA ligase C terminal region Aave_0374 PF01068 ATP dependent DNA ligase domain Aave_0374 PF04675 DNA ligase N terminus Aave_0375 PF04675 DNA ligase N terminus Aave_0375 PF01068 ATP dependent DNA ligase domain Aave_0375 PF04679 ATP dependent DNA ligase C terminal region Aave_0376 PF00270 DEAD/DEAH box helicase Aave_0376 PF00271 Helicase conserved C-terminal domain Aave_0376 PF08494 DEAD/H associated Aave_0386 PF01344 Kelch motif Aave_0387 PF02321 Outer membrane efflux protein Aave_0388 PF00873 AcrB/AcrD/AcrF family Aave_0389 PF00529 HlyD membrane-fusion protein of T1SS Aave_0389 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Aave_0390 PF08361 MAATS-type transcriptional repressor, C-terminal region Aave_0390 PF00440 Bacterial regulatory proteins, tetR family Aave_0401 PF00589 Phage integrase family Aave_0403 PF13230 Glutamine amidotransferases class-II Aave_0404 PF07690 Major Facilitator Superfamily Aave_0405 PF01361 Tautomerase enzyme Aave_0407 PF02203 Tar ligand binding domain homologue Aave_0407 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0407 PF00672 HAMP domain Aave_0408 PF01274 Malate synthase Aave_0409 PF03466 LysR substrate binding domain Aave_0409 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0411 PF01011 PQQ enzyme repeat Aave_0414 PF00750 tRNA synthetases class I (R) Aave_0414 PF05746 DALR anticodon binding domain Aave_0414 PF03485 Arginyl tRNA synthetase N terminal domain Aave_0416 PF00085 Thioredoxin Aave_0416 PF01323 DSBA-like thioredoxin domain Aave_0418 PF00005 ABC transporter Aave_0419 PF00309 Sigma-54 factor, Activator interacting domain (AID) Aave_0419 PF04963 Sigma-54 factor, core binding domain Aave_0419 PF04552 Sigma-54, DNA binding domain Aave_0420 PF03073 TspO/MBR family Aave_0421 PF00672 HAMP domain Aave_0421 PF02743 Cache domain Aave_0421 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0422 PF02926 THUMP domain Aave_0422 PF01170 Putative RNA methylase family UPF0020 Aave_0424 PF06472 ABC transporter transmembrane region 2 Aave_0424 PF00005 ABC transporter Aave_0426 PF02810 SEC-C motif Aave_0426 PF07516 SecA Wing and Scaffold domain Aave_0426 PF01043 SecA preprotein cross-linking domain Aave_0426 PF07517 SecA DEAD-like domain Aave_0427 PF00916 Sulfate permease family Aave_0427 PF01740 STAS domain Aave_0428 PF02203 Tar ligand binding domain homologue Aave_0428 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0428 PF00672 HAMP domain Aave_0429 PF02464 Competence-damaged protein Aave_0430 PF04608 Phosphatidylglycerophosphatase A Aave_0432 PF02769 AIR synthase related protein, C-terminal domain Aave_0432 PF00586 AIR synthase related protein, N-terminal domain Aave_0434 PF04107 Glutamate-cysteine ligase family 2(GCS2) Aave_0437 PF04379 ApaG domain Aave_0438 PF00834 Ribulose-phosphate 3 epimerase family Aave_0440 PF13419 Haloacid dehalogenase-like hydrolase Aave_0442 PF04715 Anthranilate synthase component I, N terminal region Aave_0442 PF00425 chorismate binding enzyme Aave_0444 PF12833 Helix-turn-helix domain Aave_0448 PF01313 Bacterial export proteins, family 3 Aave_0449 PF00813 FliP family Aave_0452 PF00771 FHIPEP family Aave_0453 PF01312 FlhB HrpN YscU SpaS Family Aave_0463 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aave_0463 PF02874 ATP synthase alpha/beta family, beta-barrel domain Aave_0463 PF18269 T3SS EscN ATPase C-terminal domain Aave_0466 PF01514 Secretory protein of YscJ/FliF family Aave_0475 PF10119 Predicted methyltransferase regulatory domain Aave_0475 PF13847 Methyltransferase domain Aave_0476 PF01551 Peptidase family M23 Aave_0476 PF01464 Transglycosylase SLT domain Aave_0476 PF10145 Phage-related minor tail protein Aave_0481 PF04717 Type VI secretion system, phage-baseplate injector Aave_0484 PF13356 Arm DNA-binding domain Aave_0484 PF00589 Phage integrase family Aave_0492 PF04002 RadC-like JAB domain Aave_0494 PF03401 Tripartite tricarboxylate transporter family receptor Aave_0495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Aave_0495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Aave_0496 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0496 PF03466 LysR substrate binding domain Aave_0497 PF04717 Type VI secretion system, phage-baseplate injector Aave_0499 PF03527 RHS protein Aave_0499 PF05593 RHS Repeat Aave_0499 PF14220 Domain of unknown function (DUF4329) Aave_0512 PF02796 Helix-turn-helix domain of resolvase Aave_0512 PF00239 Resolvase, N terminal domain Aave_0513 PF01527 Transposase Aave_0514 PF13333 Integrase core domain Aave_0514 PF13276 HTH-like domain Aave_0514 PF00665 Integrase core domain Aave_0518 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Aave_0518 PF14579 Helix-hairpin-helix motif Aave_0518 PF07733 Bacterial DNA polymerase III alpha NTPase domain Aave_0518 PF02811 PHP domain Aave_0519 PF13276 HTH-like domain Aave_0519 PF00665 Integrase core domain Aave_0519 PF13333 Integrase core domain Aave_0520 PF01527 Transposase Aave_0522 PF01609 Transposase DDE domain Aave_0523 PF13340 Putative transposase of IS4/5 family (DUF4096) Aave_0557 PF00145 C-5 cytosine-specific DNA methylase Aave_0558 PF01751 Toprim domain Aave_0558 PF01131 DNA topoisomerase Aave_0560 PF01555 DNA methylase Aave_0566 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aave_0569 PF02558 Ketopantoate reductase PanE/ApbA Aave_0569 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Aave_0570 PF00892 EamA-like transporter family Aave_0571 PF03466 LysR substrate binding domain Aave_0571 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0573 PF01266 FAD dependent oxidoreductase Aave_0575 PF01042 Endoribonuclease L-PSP Aave_0576 PF03401 Tripartite tricarboxylate transporter family receptor Aave_0578 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) Aave_0578 PF08463 EcoEI R protein C-terminal Aave_0578 PF04851 Type III restriction enzyme, res subunit Aave_0578 PF00271 Helicase conserved C-terminal domain Aave_0579 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Aave_0583 PF00117 Glutamine amidotransferase class-I Aave_0584 PF01810 LysE type translocator Aave_0585 PF02885 Glycosyl transferase family, helical bundle domain Aave_0585 PF00591 Glycosyl transferase family, a/b domain Aave_0586 PF00218 Indole-3-glycerol phosphate synthase Aave_0587 PF03167 Uracil DNA glycosylase superfamily Aave_0590 PF02547 Queuosine biosynthesis protein Aave_0592 PF11871 Domain of unknown function (DUF3391) Aave_0592 PF01966 HD domain Aave_0593 PF00270 DEAD/DEAH box helicase Aave_0593 PF00271 Helicase conserved C-terminal domain Aave_0593 PF17191 RecG wedge domain Aave_0594 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0594 PF03466 LysR substrate binding domain Aave_0595 PF00210 Ferritin-like domain Aave_0596 PF01040 UbiA prenyltransferase family Aave_0599 PF00535 Glycosyl transferase family 2 Aave_0601 PF14748 Pyrroline-5-carboxylate reductase dimerisation Aave_0601 PF03807 NADP oxidoreductase coenzyme F420-dependent Aave_0602 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aave_0602 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aave_0603 PF08220 DeoR-like helix-turn-helix domain Aave_0603 PF00455 DeoR C terminal sensor domain Aave_0604 PF17912 MalK OB fold domain Aave_0604 PF00005 ABC transporter Aave_0605 PF00005 ABC transporter Aave_0605 PF08402 TOBE domain Aave_0606 PF00528 Binding-protein-dependent transport system inner membrane component Aave_0607 PF00528 Binding-protein-dependent transport system inner membrane component Aave_0610 PF01266 FAD dependent oxidoreductase Aave_0610 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Aave_0611 PF00238 Ribosomal protein L14p/L23e Aave_0612 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Aave_0613 PF00281 Ribosomal protein L5 Aave_0613 PF00673 ribosomal L5P family C-terminus Aave_0614 PF00253 Ribosomal protein S14p/S29e Aave_0615 PF00410 Ribosomal protein S8 Aave_0616 PF00347 Ribosomal protein L6 Aave_0617 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Aave_0618 PF00333 Ribosomal protein S5, N-terminal domain Aave_0618 PF03719 Ribosomal protein S5, C-terminal domain Aave_0619 PF00327 Ribosomal protein L30p/L7e Aave_0620 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Aave_0621 PF00344 SecY translocase Aave_0622 PF00444 Ribosomal protein L36 Aave_0623 PF00416 Ribosomal protein S13/S18 Aave_0624 PF00411 Ribosomal protein S11 Aave_0625 PF01479 S4 domain Aave_0625 PF00163 Ribosomal protein S4/S9 N-terminal domain Aave_0626 PF01000 RNA polymerase Rpb3/RpoA insert domain Aave_0626 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Aave_0626 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Aave_0627 PF01196 Ribosomal protein L17 Aave_0628 PF00012 Hsp70 protein Aave_0629 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aave_0630 PF02021 Uncharacterised protein family UPF0102 Aave_0631 PF13580 SIS domain Aave_0632 PF04972 BON domain Aave_0633 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Aave_0633 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Aave_0635 PF00437 Type II/IV secretion system protein Aave_0636 PF13545 Crp-like helix-turn-helix domain Aave_0636 PF00027 Cyclic nucleotide-binding domain Aave_0637 PF00437 Type II/IV secretion system protein Aave_0638 PF01168 Alanine racemase, N-terminal domain Aave_0639 PF01212 Beta-eliminating lyase Aave_0641 PF04286 Protein of unknown function (DUF445) Aave_0645 PF02913 FAD linked oxidases, C-terminal domain Aave_0645 PF01565 FAD binding domain Aave_0647 PF03466 LysR substrate binding domain Aave_0647 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0648 PF00551 Formyl transferase Aave_0649 PF03707 Bacterial signalling protein N terminal repeat Aave_0649 PF00563 EAL domain Aave_0649 PF00990 Diguanylate cyclase, GGDEF domain Aave_0651 PF02308 MgtC family Aave_0654 PF00072 Response regulator receiver domain Aave_0654 PF00196 Bacterial regulatory proteins, luxR family Aave_0657 PF07715 TonB-dependent Receptor Plug Domain Aave_0657 PF00593 TonB dependent receptor Aave_0659 PF07690 Major Facilitator Superfamily Aave_0660 PF07690 Major Facilitator Superfamily Aave_0661 PF00384 Molybdopterin oxidoreductase Aave_0661 PF01568 Molydopterin dinucleotide binding domain Aave_0661 PF14710 Respiratory nitrate reductase alpha N-terminal Aave_0662 PF13247 4Fe-4S dicluster domain Aave_0662 PF14711 Respiratory nitrate reductase beta C-terminal Aave_0663 PF02613 Nitrate reductase delta subunit Aave_0664 PF02665 Nitrate reductase gamma subunit Aave_0665 PF00639 PPIC-type PPIASE domain Aave_0665 PF09312 SurA N-terminal domain Aave_0666 PF00484 Carbonic anhydrase Aave_0667 PF03477 ATP cone domain Aave_0667 PF00317 Ribonucleotide reductase, all-alpha domain Aave_0667 PF02867 Ribonucleotide reductase, barrel domain Aave_0669 PF01814 Hemerythrin HHE cation binding domain Aave_0672 PF06250 YhcG PDDEXK nuclease domain Aave_0672 PF17761 DUF1016 N-terminal domain Aave_0675 PF00580 UvrD/REP helicase N-terminal domain Aave_0675 PF13361 UvrD-like helicase C-terminal domain Aave_0676 PF02463 RecF/RecN/SMC N terminal domain Aave_0679 PF06067 Domain of unknown function (DUF932) Aave_0680 PF17762 HTH domain found in ParB protein Aave_0680 PF02195 ParB-like nuclease domain Aave_0681 PF05284 Protein of unknown function (DUF736) Aave_0687 PF13614 AAA domain Aave_0690 PF10502 Signal peptidase, peptidase S26 Aave_0692 PF01527 Transposase Aave_0693 PF13333 Integrase core domain Aave_0693 PF00665 Integrase core domain Aave_0693 PF13276 HTH-like domain Aave_0697 PF00291 Pyridoxal-phosphate dependent enzyme Aave_0698 PF03466 LysR substrate binding domain Aave_0698 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0699 PF02525 Flavodoxin-like fold Aave_0700 PF07690 Major Facilitator Superfamily Aave_0702 PF13276 HTH-like domain Aave_0702 PF13333 Integrase core domain Aave_0702 PF00665 Integrase core domain Aave_0703 PF01527 Transposase Aave_0704 PF07690 Major Facilitator Superfamily Aave_0705 PF01527 Transposase Aave_0706 PF00665 Integrase core domain Aave_0706 PF13333 Integrase core domain Aave_0706 PF13276 HTH-like domain Aave_0708 PF00665 Integrase core domain Aave_0708 PF13276 HTH-like domain Aave_0708 PF13333 Integrase core domain Aave_0709 PF01527 Transposase Aave_0710 PF13817 IS66 C-terminal element Aave_0710 PF13007 Transposase C of IS166 homeodomain Aave_0710 PF13005 zinc-finger binding domain of transposase IS66 Aave_0710 PF03050 Transposase IS66 family Aave_0713 PF02525 Flavodoxin-like fold Aave_0715 PF00248 Aldo/keto reductase family Aave_0716 PF03466 LysR substrate binding domain Aave_0716 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0717 PF07690 Major Facilitator Superfamily Aave_0718 PF00893 Small Multidrug Resistance protein Aave_0721 PF00893 Small Multidrug Resistance protein Aave_0722 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0722 PF03466 LysR substrate binding domain Aave_0724 PF02534 Type IV secretory system Conjugative DNA transfer Aave_0726 PF00437 Type II/IV secretion system protein Aave_0727 PF04956 TrbC/VIRB2 family Aave_0729 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Aave_0732 PF04610 TrbL/VirB6 plasmid conjugal transfer protein Aave_0734 PF03524 Conjugal transfer protein Aave_0735 PF03743 Bacterial conjugation TrbI-like protein Aave_0738 PF07690 Major Facilitator Superfamily Aave_0744 PF03401 Tripartite tricarboxylate transporter family receptor Aave_0746 PF13185 GAF domain Aave_0746 PF00563 EAL domain Aave_0746 PF00990 Diguanylate cyclase, GGDEF domain Aave_0747 PF03006 Haemolysin-III related Aave_0749 PF00990 Diguanylate cyclase, GGDEF domain Aave_0749 PF17158 Membrane-associated sensor, integral membrane domain Aave_0751 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Aave_0752 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Aave_0754 PF00920 Dehydratase family Aave_0755 PF03480 Bacterial extracellular solute-binding protein, family 7 Aave_0756 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0756 PF03466 LysR substrate binding domain Aave_0757 PF03466 LysR substrate binding domain Aave_0757 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_0758 PF17954 Quercetinase C-terminal cupin domain Aave_0758 PF02678 Pirin Aave_0759 PF00857 Isochorismatase family Aave_0760 PF07969 Amidohydrolase family Aave_0762 PF07690 Major Facilitator Superfamily Aave_0767 PF01568 Molydopterin dinucleotide binding domain Aave_0767 PF00384 Molybdopterin oxidoreductase Aave_0767 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Aave_0769 PF01546 Peptidase family M20/M25/M40 Aave_0769 PF07687 Peptidase dimerisation domain Aave_0770 PF01546 Peptidase family M20/M25/M40 Aave_0770 PF07687 Peptidase dimerisation domain Aave_0772 PF02203 Tar ligand binding domain homologue Aave_0772 PF00672 HAMP domain Aave_0772 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0775 PF00117 Glutamine amidotransferase class-I Aave_0775 PF00958 GMP synthase C terminal domain Aave_0775 PF13302 Acetyltransferase (GNAT) domain Aave_0775 PF13673 Acetyltransferase (GNAT) domain Aave_0775 PF03352 Methyladenine glycosylase Aave_0779 PF03401 Tripartite tricarboxylate transporter family receptor Aave_0780 PF03401 Tripartite tricarboxylate transporter family receptor Aave_0781 PF00501 AMP-binding enzyme Aave_0781 PF14535 AMP-binding enzyme C-terminal domain Aave_0782 PF00005 ABC transporter Aave_0784 PF11862 Domain of unknown function (DUF3382) Aave_0784 PF02653 Branched-chain amino acid transport system / permease component Aave_0785 PF02653 Branched-chain amino acid transport system / permease component Aave_0786 PF12399 Branched-chain amino acid ATP-binding cassette transporter Aave_0786 PF00005 ABC transporter Aave_0787 PF00501 AMP-binding enzyme Aave_0788 PF13401 AAA domain Aave_0788 PF01471 Putative peptidoglycan binding domain Aave_0789 PF16537 Type II secretion system protein B Aave_0791 PF05987 Bacterial protein of unknown function (DUF898) Aave_0792 PF01479 S4 domain Aave_0792 PF00849 RNA pseudouridylate synthase Aave_0794 PF01494 FAD binding domain Aave_0798 PF02798 Glutathione S-transferase, N-terminal domain Aave_0799 PF01678 Diaminopimelate epimerase Aave_0801 PF02899 Phage integrase, N-terminal SAM-like domain Aave_0801 PF00589 Phage integrase family Aave_0803 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0803 PF00672 HAMP domain Aave_0803 PF12729 Four helix bundle sensory module for signal transduction Aave_0805 PF10672 S-adenosylmethionine-dependent methyltransferase Aave_0805 PF17785 PUA-like domain Aave_0806 PF08448 PAS fold Aave_0806 PF08447 PAS fold Aave_0806 PF00563 EAL domain Aave_0806 PF00990 Diguanylate cyclase, GGDEF domain Aave_0806 PF13426 PAS domain Aave_0806 PF05231 MASE1 Aave_0807 PF02492 CobW/HypB/UreG, nucleotide-binding domain Aave_0807 PF07683 Cobalamin synthesis protein cobW C-terminal domain Aave_0808 PF01258 Prokaryotic dksA/traR C4-type zinc finger Aave_0810 PF00227 Proteasome subunit Aave_0811 PF07724 AAA domain (Cdc48 subfamily) Aave_0811 PF00004 ATPase family associated with various cellular activities (AAA) Aave_0812 PF02381 MraZ protein, putative antitoxin-like Aave_0813 PF01795 MraW methylase family Aave_0814 PF04999 Cell division protein FtsL Aave_0815 PF03717 Penicillin-binding Protein dimerisation domain Aave_0815 PF00905 Penicillin binding protein transpeptidase domain Aave_0816 PF02875 Mur ligase family, glutamate ligase domain Aave_0816 PF08245 Mur ligase middle domain Aave_0817 PF01225 Mur ligase family, catalytic domain Aave_0817 PF02875 Mur ligase family, glutamate ligase domain Aave_0817 PF08245 Mur ligase middle domain Aave_0818 PF00953 Glycosyl transferase family 4 Aave_0818 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Aave_0819 PF08245 Mur ligase middle domain Aave_0819 PF02875 Mur ligase family, glutamate ligase domain Aave_0820 PF01098 Cell cycle protein Aave_0821 PF04101 Glycosyltransferase family 28 C-terminal domain Aave_0821 PF03033 Glycosyltransferase family 28 N-terminal domain Aave_0822 PF08245 Mur ligase middle domain Aave_0822 PF02875 Mur ligase family, glutamate ligase domain Aave_0822 PF01225 Mur ligase family, catalytic domain Aave_0823 PF01820 D-ala D-ala ligase N-terminus Aave_0823 PF07478 D-ala D-ala ligase C-terminus Aave_0824 PF08478 POTRA domain, FtsQ-type Aave_0824 PF03799 Cell division protein FtsQ Aave_0825 PF02491 SHS2 domain inserted in FTSA Aave_0826 PF12327 FtsZ family, C-terminal domain Aave_0826 PF00091 Tubulin/FtsZ family, GTPase domain Aave_0827 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Aave_0829 PF01964 Radical SAM ThiC family Aave_0829 PF13667 ThiC-associated domain Aave_0830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0830 PF00672 HAMP domain Aave_0831 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0831 PF02203 Tar ligand binding domain homologue Aave_0831 PF00672 HAMP domain Aave_0833 PF02075 Crossover junction endodeoxyribonuclease RuvC Aave_0836 PF03401 Tripartite tricarboxylate transporter family receptor Aave_0838 PF03328 HpcH/HpaI aldolase/citrate lyase family Aave_0839 PF09339 IclR helix-turn-helix domain Aave_0839 PF01614 Bacterial transcriptional regulator Aave_0840 PF00912 Transglycosylase Aave_0841 PF08501 Shikimate dehydrogenase substrate binding domain Aave_0841 PF01488 Shikimate / quinate 5-dehydrogenase Aave_0841 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Aave_0843 PF00773 RNB domain Aave_0845 PF05728 Uncharacterised protein family (UPF0227) Aave_0846 PF01098 Cell cycle protein Aave_0847 PF01609 Transposase DDE domain Aave_0848 PF13340 Putative transposase of IS4/5 family (DUF4096) Aave_0849 PF01425 Amidase Aave_0850 PF01523 Putative modulator of DNA gyrase Aave_0852 PF00793 DAHP synthetase I family Aave_0854 PF01225 Mur ligase family, catalytic domain Aave_0854 PF08245 Mur ligase middle domain Aave_0854 PF02875 Mur ligase family, glutamate ligase domain Aave_0856 PF08534 Redoxin Aave_0857 PF00364 Biotin-requiring enzyme Aave_0858 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Aave_0858 PF02785 Biotin carboxylase C-terminal domain Aave_0858 PF00289 Biotin carboxylase, N-terminal domain Aave_0861 PF00294 pfkB family carbohydrate kinase Aave_0863 PF00268 Ribonucleotide reductase, small chain Aave_0864 PF00317 Ribonucleotide reductase, all-alpha domain Aave_0864 PF02867 Ribonucleotide reductase, barrel domain Aave_0864 PF03477 ATP cone domain Aave_0865 PF01510 N-acetylmuramoyl-L-alanine amidase Aave_0866 PF02954 Bacterial regulatory protein, Fis family Aave_0866 PF00158 Sigma-54 interaction domain Aave_0866 PF00072 Response regulator receiver domain Aave_0867 PF00512 His Kinase A (phospho-acceptor) domain Aave_0867 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_0870 PF02978 Signal peptide binding domain Aave_0870 PF00448 SRP54-type protein, GTPase domain Aave_0870 PF02881 SRP54-type protein, helical bundle domain Aave_0871 PF00535 Glycosyl transferase family 2 Aave_0872 PF00072 Response regulator receiver domain Aave_0872 PF00158 Sigma-54 interaction domain Aave_0874 PF00512 His Kinase A (phospho-acceptor) domain Aave_0874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_0875 PF01938 TRAM domain Aave_0875 PF00919 Uncharacterized protein family UPF0004 Aave_0875 PF04055 Radical SAM superfamily Aave_0877 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_0877 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Aave_0877 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_0878 PF00296 Luciferase-like monooxygenase Aave_0879 PF03358 NADPH-dependent FMN reductase Aave_0881 PF00158 Sigma-54 interaction domain Aave_0882 PF00378 Enoyl-CoA hydratase/isomerase Aave_0884 PF10411 Disulfide bond isomerase protein N-terminus Aave_0884 PF13098 Thioredoxin-like domain Aave_0885 PF01494 FAD binding domain Aave_0886 PF00111 2Fe-2S iron-sulfur cluster binding domain Aave_0886 PF03473 MOSC domain Aave_0886 PF03476 MOSC N-terminal beta barrel domain Aave_0887 PF01926 50S ribosome-binding GTPase Aave_0887 PF06071 Protein of unknown function (DUF933) Aave_0890 PF00005 ABC transporter Aave_0890 PF00571 CBS domain Aave_0891 PF00892 EamA-like transporter family Aave_0892 PF09335 SNARE associated Golgi protein Aave_0893 PF00990 Diguanylate cyclase, GGDEF domain Aave_0893 PF08448 PAS fold Aave_0894 PF01207 Dihydrouridine synthase (Dus) Aave_0895 PF02954 Bacterial regulatory protein, Fis family Aave_0896 PF02142 MGS-like domain Aave_0896 PF01808 AICARFT/IMPCHase bienzyme Aave_0898 PF00202 Aminotransferase class-III Aave_0899 PF02581 Thiamine monophosphate synthase Aave_0899 PF03070 TENA/THI-4/PQQC family Aave_0899 PF08543 Phosphomethylpyrimidine kinase Aave_0900 PF00301 Rubredoxin Aave_0901 PF00072 Response regulator receiver domain Aave_0902 PF00072 Response regulator receiver domain Aave_0903 PF01584 CheW-like domain Aave_0904 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Aave_0904 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0905 PF09078 CheY binding Aave_0905 PF01627 Hpt domain Aave_0905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_0905 PF02895 Signal transducing histidine kinase, homodimeric domain Aave_0905 PF01584 CheW-like domain Aave_0906 PF00875 DNA photolyase Aave_0906 PF03441 FAD binding domain of DNA photolyase Aave_0907 PF02622 Uncharacterized ACR, COG1678 Aave_0908 PF03652 Holliday junction resolvase Aave_0909 PF00156 Phosphoribosyl transferase domain Aave_0910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Aave_0910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Aave_0911 PF01979 Amidohydrolase family Aave_0912 PF01553 Acyltransferase Aave_0913 PF00005 ABC transporter Aave_0913 PF08402 TOBE domain Aave_0914 PF00528 Binding-protein-dependent transport system inner membrane component Aave_0915 PF03960 ArsC family Aave_0916 PF00437 Type II/IV secretion system protein Aave_0917 PF03958 Bacterial type II/III secretion system short domain Aave_0917 PF00263 Bacterial type II and III secretion system protein Aave_0923 PF07963 Prokaryotic N-terminal methylation motif Aave_0923 PF02501 Type II secretion system (T2SS), protein I Aave_0924 PF12019 Type II transport protein GspH Aave_0925 PF08334 Type II secretion system (T2SS), protein G Aave_0925 PF07963 Prokaryotic N-terminal methylation motif Aave_0928 PF02654 Cobalamin-5-phosphate synthase Aave_0929 PF00291 Pyridoxal-phosphate dependent enzyme Aave_0929 PF00585 C-terminal regulatory domain of Threonine dehydratase Aave_0930 PF02566 OsmC-like protein Aave_0931 PF03232 Ubiquinone biosynthesis protein COQ7 Aave_0932 PF13609 Gram-negative porin Aave_0933 PF00267 Gram-negative porin Aave_0934 PF00528 Binding-protein-dependent transport system inner membrane component Aave_0935 PF07687 Peptidase dimerisation domain Aave_0935 PF01546 Peptidase family M20/M25/M40 Aave_0936 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aave_0937 PF12911 N-terminal TM domain of oligopeptide transport permease C Aave_0937 PF00528 Binding-protein-dependent transport system inner membrane component Aave_0938 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aave_0938 PF00005 ABC transporter Aave_0939 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aave_0939 PF00005 ABC transporter Aave_0940 PF00672 HAMP domain Aave_0940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_0940 PF02203 Tar ligand binding domain homologue Aave_0941 PF01380 SIS domain Aave_0941 PF01418 Helix-turn-helix domain, rpiR family Aave_0941 PF02685 Glucokinase Aave_0942 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Aave_0942 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Aave_0943 PF00923 Transaldolase/Fructose-6-phosphate aldolase Aave_0944 PF00342 Phosphoglucose isomerase Aave_0945 PF00118 TCP-1/cpn60 chaperonin family Aave_0946 PF00166 Chaperonin 10 Kd subunit Aave_0948 PF00483 Nucleotidyl transferase Aave_0948 PF01050 Mannose-6-phosphate isomerase Aave_0949 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Aave_0949 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Aave_0949 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Aave_0950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aave_0950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aave_0951 PF00132 Bacterial transferase hexapeptide (six repeats) Aave_0952 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Aave_0953 PF02350 UDP-N-acetylglucosamine 2-epimerase Aave_0954 PF01061 ABC-2 type transporter Aave_0955 PF14524 Wzt C-terminal domain Aave_0955 PF00005 ABC transporter Aave_0956 PF13649 Methyltransferase domain Aave_0957 PF13439 Glycosyltransferase Family 4 Aave_0957 PF00534 Glycosyl transferases group 1 Aave_0959 PF00733 Asparagine synthase Aave_0959 PF13537 Glutamine amidotransferase domain Aave_0961 PF13537 Glutamine amidotransferase domain Aave_0961 PF00733 Asparagine synthase Aave_0964 PF00535 Glycosyl transferase family 2 Aave_0966 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Aave_0966 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_0967 PF01180 Dihydroorotate dehydrogenase Aave_0968 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Aave_0969 PF01979 Amidohydrolase family Aave_0970 PF07687 Peptidase dimerisation domain Aave_0970 PF01546 Peptidase family M20/M25/M40 Aave_0974 PF01467 Cytidylyltransferase-like Aave_0975 PF02540 NAD synthase Aave_0975 PF00795 Carbon-nitrogen hydrolase Aave_0976 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Aave_0976 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Aave_0979 PF02772 S-adenosylmethionine synthetase, central domain Aave_0979 PF00438 S-adenosylmethionine synthetase, N-terminal domain Aave_0979 PF02773 S-adenosylmethionine synthetase, C-terminal domain Aave_0981 PF03279 Bacterial lipid A biosynthesis acyltransferase Aave_0983 PF01926 50S ribosome-binding GTPase Aave_0984 PF00034 Cytochrome c Aave_0985 PF05140 ResB-like family Aave_0986 PF01578 Cytochrome C assembly protein Aave_0987 PF00174 Oxidoreductase molybdopterin binding domain Aave_0988 PF01794 Ferric reductase like transmembrane component Aave_0992 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Aave_0992 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Aave_0994 PF01491 Frataxin-like domain Aave_0995 PF00905 Penicillin binding protein transpeptidase domain Aave_0995 PF00912 Transglycosylase Aave_0995 PF17092 Penicillin-binding protein OB-like domain Aave_1000 PF07660 Secretin and TonB N terminus short domain Aave_1000 PF03958 Bacterial type II/III secretion system short domain Aave_1000 PF11741 AMIN domain Aave_1000 PF00263 Bacterial type II and III secretion system protein Aave_1002 PF01202 Shikimate kinase Aave_1003 PF01761 3-dehydroquinate synthase Aave_1004 PF01966 HD domain Aave_1004 PF13286 Phosphohydrolase-associated domain Aave_1008 PF04898 Glutamate synthase central domain Aave_1008 PF01645 Conserved region in glutamate synthase Aave_1008 PF01493 GXGXG motif Aave_1008 PF00310 Glutamine amidotransferases class-II Aave_1009 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_1009 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Aave_1010 PF00497 Bacterial extracellular solute-binding proteins, family 3 Aave_1011 PF00528 Binding-protein-dependent transport system inner membrane component Aave_1012 PF00005 ABC transporter Aave_1013 PF00005 ABC transporter Aave_1014 PF02405 Permease MlaE Aave_1015 PF02470 MlaD protein Aave_1016 PF04333 MlaA lipoprotein Aave_1019 PF00005 ABC transporter Aave_1020 PF01061 ABC-2 type transporter Aave_1021 PF01722 BolA-like protein Aave_1022 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Aave_1023 PF01634 ATP phosphoribosyltransferase Aave_1031 PF00155 Aminotransferase class I and II Aave_1032 PF00475 Imidazoleglycerol-phosphate dehydratase Aave_1033 PF00117 Glutamine amidotransferase class-I Aave_1034 PF00977 Histidine biosynthesis protein Aave_1038 PF17102 Stealth protein CR3, conserved region 3 Aave_1038 PF17103 Stealth protein CR4, conserved region 4 Aave_1038 PF00534 Glycosyl transferases group 1 Aave_1038 PF17101 Stealth protein CR1, conserved region 1 Aave_1038 PF11380 Stealth protein CR2, conserved region 2 Aave_1044 PF16363 GDP-mannose 4,6 dehydratase Aave_1045 PF00375 Sodium:dicarboxylate symporter family Aave_1047 PF00977 Histidine biosynthesis protein Aave_1048 PF01502 Phosphoribosyl-AMP cyclohydrolase Aave_1049 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Aave_1052 PF01230 HIT domain Aave_1053 PF02416 mttA/Hcf106 family Aave_1054 PF02416 mttA/Hcf106 family Aave_1055 PF00902 Sec-independent protein translocase protein (TatC) Aave_1058 PF08946 Osmosensory transporter coiled coil Aave_1058 PF00083 Sugar (and other) transporter Aave_1059 PF01784 NIF3 (NGG1p interacting factor 3) Aave_1061 PF13519 von Willebrand factor type A domain Aave_1062 PF01882 Protein of unknown function DUF58 Aave_1063 PF07726 ATPase family associated with various cellular activities (AAA) Aave_1063 PF17863 AAA lid domain Aave_1064 PF00595 PDZ domain Aave_1065 PF01026 TatD related DNase Aave_1069 PF07331 Tripartite tricarboxylate transporter TctB family Aave_1070 PF01970 Tripartite tricarboxylate transporter TctA family Aave_1078 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_1078 PF13192 Thioredoxin domain Aave_1080 PF00106 short chain dehydrogenase Aave_1081 PF00672 HAMP domain Aave_1081 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_1081 PF02743 Cache domain Aave_1082 PF01774 UreD urease accessory protein Aave_1086 PF01176 Translation initiation factor 1A / IF-1 Aave_1091 PF00528 Binding-protein-dependent transport system inner membrane component Aave_1092 PF00005 ABC transporter Aave_1095 PF01515 Phosphate acetyl/butaryl transferase Aave_1095 PF00390 Malic enzyme, N-terminal domain Aave_1095 PF03949 Malic enzyme, NAD binding domain Aave_1097 PF01177 Asp/Glu/Hydantoin racemase Aave_1098 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Aave_1099 PF07729 FCD domain Aave_1099 PF00392 Bacterial regulatory proteins, gntR family Aave_1100 PF02203 Tar ligand binding domain homologue Aave_1100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_1100 PF00672 HAMP domain Aave_1101 PF00375 Sodium:dicarboxylate symporter family Aave_1106 PF07687 Peptidase dimerisation domain Aave_1106 PF01546 Peptidase family M20/M25/M40 Aave_1109 PF01546 Peptidase family M20/M25/M40 Aave_1109 PF07687 Peptidase dimerisation domain Aave_1110 PF07687 Peptidase dimerisation domain Aave_1110 PF01546 Peptidase family M20/M25/M40 Aave_1112 PF00392 Bacterial regulatory proteins, gntR family Aave_1112 PF07729 FCD domain Aave_1113 PF05161 MOFRL family Aave_1113 PF13660 Domain of unknown function (DUF4147) Aave_1116 PF00576 HIUase/Transthyretin family Aave_1120 PF00990 Diguanylate cyclase, GGDEF domain Aave_1120 PF03707 Bacterial signalling protein N terminal repeat Aave_1120 PF00563 EAL domain Aave_1121 PF00196 Bacterial regulatory proteins, luxR family Aave_1121 PF00072 Response regulator receiver domain Aave_1122 PF17200 Single Cache domain 2 Aave_1122 PF07730 Histidine kinase Aave_1123 PF01042 Endoribonuclease L-PSP Aave_1125 PF13609 Gram-negative porin Aave_1127 PF00563 EAL domain Aave_1127 PF00990 Diguanylate cyclase, GGDEF domain Aave_1127 PF08447 PAS fold Aave_1127 PF08448 PAS fold Aave_1127 PF13426 PAS domain Aave_1127 PF05231 MASE1 Aave_1129 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Aave_1129 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Aave_1130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Aave_1130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Aave_1130 PF00111 2Fe-2S iron-sulfur cluster binding domain Aave_1130 PF01799 [2Fe-2S] binding domain Aave_1132 PF00005 ABC transporter Aave_1135 PF02608 ABC transporter substrate-binding protein PnrA-like Aave_1136 PF00355 Rieske [2Fe-2S] domain Aave_1138 PF00962 Adenosine/AMP deaminase Aave_1140 PF01804 Penicillin amidase Aave_1141 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aave_1141 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Aave_1142 PF02608 ABC transporter substrate-binding protein PnrA-like Aave_1144 PF00692 dUTPase Aave_1147 PF04228 Putative neutral zinc metallopeptidase Aave_1148 PF00271 Helicase conserved C-terminal domain Aave_1148 PF00270 DEAD/DEAH box helicase Aave_1149 PF00149 Calcineurin-like phosphoesterase Aave_1150 PF00816 H-NS histone family Aave_1151 PF00330 Aconitase family (aconitate hydratase) Aave_1151 PF00694 Aconitase C-terminal domain Aave_1152 PF00990 Diguanylate cyclase, GGDEF domain Aave_1152 PF00563 EAL domain Aave_1152 PF03707 Bacterial signalling protein N terminal repeat Aave_1153 PF00990 Diguanylate cyclase, GGDEF domain Aave_1153 PF00563 EAL domain Aave_1153 PF03707 Bacterial signalling protein N terminal repeat Aave_1154 PF01494 FAD binding domain Aave_1155 PF03301 Tryptophan 2,3-dioxygenase Aave_1156 PF00266 Aminotransferase class-V Aave_1157 PF04199 Putative cyclase Aave_1158 PF01037 Lrp/AsnC ligand binding domain Aave_1159 PF03692 Putative zinc- or iron-chelating domain Aave_1161 PF02421 Ferrous iron transport protein B Aave_1161 PF07664 Ferrous iron transport protein B C terminus Aave_1161 PF07670 Nucleoside recognition Aave_1163 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Aave_1163 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Aave_1164 PF00202 Aminotransferase class-III Aave_1166 PF06039 Malate:quinone oxidoreductase (Mqo) Aave_1167 PF01649 Ribosomal protein S20 Aave_1168 PF03023 Lipid II flippase MurJ Aave_1169 PF13369 Transglutaminase-like superfamily Aave_1170 PF14489 QueF-like protein Aave_1170 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Aave_1172 PF03883 Peroxide stress protein YaaA Aave_1173 PF10150 Ribonuclease E/G family Aave_1173 PF12111 Polyribonucleotide phosphorylase C terminal Aave_1173 PF00575 S1 RNA binding domain Aave_1174 PF01479 S4 domain Aave_1174 PF00849 RNA pseudouridylate synthase Aave_1177 PF06965 Na+/H+ antiporter 1 Aave_1177 PF01343 Peptidase family S49 Aave_1178 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aave_1179 PF02545 Maf-like protein Aave_1180 PF02620 Large ribosomal RNA subunit accumulation protein YceD Aave_1181 PF01783 Ribosomal L32p protein family Aave_1182 PF02504 Fatty acid synthesis protein Aave_1183 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Aave_1183 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Aave_1184 PF00698 Acyl transferase domain Aave_1186 PF00550 Phosphopantetheine attachment site Aave_1187 PF00109 Beta-ketoacyl synthase, N-terminal domain Aave_1187 PF02801 Beta-ketoacyl synthase, C-terminal domain Aave_1189 PF04542 Sigma-70 region 2 Aave_1189 PF08281 Sigma-70, region 4 Aave_1192 PF13180 PDZ domain Aave_1193 PF06421 GTP-binding protein LepA C-terminus Aave_1193 PF00009 Elongation factor Tu GTP binding domain Aave_1193 PF00679 Elongation factor G C-terminus Aave_1194 PF10502 Signal peptidase, peptidase S26 Aave_1196 PF14622 Ribonuclease-III-like Aave_1196 PF00035 Double-stranded RNA binding motif Aave_1197 PF07650 KH domain Aave_1197 PF01926 50S ribosome-binding GTPase Aave_1198 PF02565 Recombination protein O C terminal Aave_1198 PF11967 Recombination protein O N terminal Aave_1199 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Aave_1200 PF00933 Glycosyl hydrolase family 3 N terminal domain Aave_1201 PF11737 Protein of unknown function (DUF3300) Aave_1204 PF00152 tRNA synthetases class II (D, K and N) Aave_1204 PF01336 OB-fold nucleic acid binding domain Aave_1209 PF02397 Bacterial sugar transferase Aave_1212 PF02325 YGGT family Aave_1213 PF17848 Acetyl-coA carboxylase zinc finger domain Aave_1213 PF01039 Carboxyl transferase domain Aave_1214 PF00290 Tryptophan synthase alpha chain Aave_1215 PF00291 Pyridoxal-phosphate dependent enzyme Aave_1216 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Aave_1217 PF01416 tRNA pseudouridine synthase Aave_1219 PF01118 Semialdehyde dehydrogenase, NAD binding domain Aave_1219 PF02774 Semialdehyde dehydrogenase, dimerisation domain Aave_1221 PF00180 Isocitrate/isopropylmalate dehydrogenase Aave_1222 PF00694 Aconitase C-terminal domain Aave_1223 PF00330 Aconitase family (aconitate hydratase) Aave_1225 PF01556 DnaJ C terminal domain Aave_1225 PF00684 DnaJ central domain Aave_1225 PF00226 DnaJ domain Aave_1226 PF00012 Hsp70 protein Aave_1227 PF01025 GrpE Aave_1228 PF01250 Ribosomal protein S6 Aave_1230 PF01084 Ribosomal protein S18 Aave_1231 PF01281 Ribosomal protein L9, N-terminal domain Aave_1231 PF03948 Ribosomal protein L9, C-terminal domain Aave_1232 PF00772 DnaB-like helicase N terminal domain Aave_1232 PF03796 DnaB-like helicase C terminal domain Aave_1234 PF13638 PIN domain Aave_1234 PF02562 PhoH-like protein Aave_1235 PF00578 AhpC/TSA family Aave_1237 PF00155 Aminotransferase class I and II Aave_1238 PF01842 ACT domain Aave_1238 PF00742 Homoserine dehydrogenase Aave_1238 PF03447 Homoserine dehydrogenase, NAD binding domain Aave_1239 PF00291 Pyridoxal-phosphate dependent enzyme Aave_1239 PF14821 Threonine synthase N terminus Aave_1240 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Aave_1241 PF00994 Probable molybdopterin binding domain Aave_1241 PF03454 MoeA C-terminal region (domain IV) Aave_1241 PF03453 MoeA N-terminal region (domain I and II) Aave_1242 PF02597 ThiS family Aave_1243 PF00701 Dihydrodipicolinate synthetase family Aave_1248 PF02391 MoaE protein Aave_1249 PF10431 C-terminal, D2-small domain, of ClpB protein Aave_1249 PF02861 Clp amino terminal domain, pathogenicity island component Aave_1249 PF17871 AAA lid domain Aave_1249 PF07724 AAA domain (Cdc48 subfamily) Aave_1249 PF00004 ATPase family associated with various cellular activities (AAA) Aave_1251 PF00171 Aldehyde dehydrogenase family Aave_1253 PF05175 Methyltransferase small domain Aave_1255 PF01207 Dihydrouridine synthase (Dus) Aave_1256 PF13091 PLD-like domain Aave_1258 PF00312 Ribosomal protein S15 Aave_1259 PF03725 3' exoribonuclease family, domain 2 Aave_1259 PF00575 S1 RNA binding domain Aave_1259 PF01138 3' exoribonuclease family, domain 1 Aave_1259 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Aave_1259 PF00013 KH domain Aave_1260 PF14765 Polyketide synthase dehydratase Aave_1260 PF00550 Phosphopantetheine attachment site Aave_1260 PF08659 KR domain Aave_1260 PF02801 Beta-ketoacyl synthase, C-terminal domain Aave_1260 PF08240 Alcohol dehydrogenase GroES-like domain Aave_1260 PF16197 Ketoacyl-synthetase C-terminal extension Aave_1260 PF00698 Acyl transferase domain Aave_1260 PF00109 Beta-ketoacyl synthase, N-terminal domain Aave_1261 PF00121 Triosephosphate isomerase Aave_1262 PF03840 Preprotein translocase SecG subunit Aave_1263 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Aave_1264 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Aave_1265 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Aave_1266 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Aave_1268 PF10531 SLBB domain Aave_1268 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Aave_1268 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Aave_1269 PF00384 Molybdopterin oxidoreductase Aave_1269 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Aave_1269 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Aave_1270 PF00146 NADH dehydrogenase Aave_1271 PF12838 4Fe-4S dicluster domain Aave_1272 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Aave_1273 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Aave_1274 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Aave_1274 PF00361 Proton-conducting membrane transporter Aave_1275 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Aave_1275 PF00361 Proton-conducting membrane transporter Aave_1276 PF00361 Proton-conducting membrane transporter Aave_1279 PF00005 ABC transporter Aave_1279 PF00664 ABC transporter transmembrane region Aave_1280 PF00005 ABC transporter Aave_1280 PF12399 Branched-chain amino acid ATP-binding cassette transporter Aave_1281 PF00005 ABC transporter Aave_1284 PF02653 Branched-chain amino acid transport system / permease component Aave_1288 PF13181 Tetratricopeptide repeat Aave_1288 PF00535 Glycosyl transferase family 2 Aave_1292 PF00011 Hsp20/alpha crystallin family Aave_1293 PF00005 ABC transporter Aave_1295 PF05368 NmrA-like family Aave_1296 PF01638 HxlR-like helix-turn-helix Aave_1297 PF12146 Serine aminopeptidase, S33 Aave_1298 PF03009 Glycerophosphoryl diester phosphodiesterase family Aave_1300 PF01119 DNA mismatch repair protein, C-terminal domain Aave_1300 PF08676 MutL C terminal dimerisation domain Aave_1301 PF09335 SNARE associated Golgi protein Aave_1302 PF00561 alpha/beta hydrolase fold Aave_1305 PF01520 N-acetylmuramoyl-L-alanine amidase Aave_1305 PF11741 AMIN domain Aave_1306 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Aave_1307 PF08331 Domain of unknown function (DUF1730) Aave_1309 PF03466 LysR substrate binding domain Aave_1309 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_1310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Aave_1310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Aave_1312 PF03401 Tripartite tricarboxylate transporter family receptor Aave_1313 PF02899 Phage integrase, N-terminal SAM-like domain Aave_1313 PF00589 Phage integrase family Aave_1314 PF03401 Tripartite tricarboxylate transporter family receptor Aave_1315 PF08668 HDOD domain Aave_1315 PF00563 EAL domain Aave_1316 PF08668 HDOD domain Aave_1316 PF00563 EAL domain Aave_1317 PF04305 Protein of unknown function (DUF455) Aave_1318 PF00132 Bacterial transferase hexapeptide (six repeats) Aave_1319 PF01430 Hsp33 protein Aave_1321 PF04977 Septum formation initiator Aave_1322 PF00113 Enolase, C-terminal TIM barrel domain Aave_1322 PF03952 Enolase, N-terminal domain Aave_1326 PF00793 DAHP synthetase I family Aave_1327 PF00117 Glutamine amidotransferase class-I Aave_1327 PF06418 CTP synthase N-terminus Aave_1328 PF04127 DNA / pantothenate metabolism flavoprotein Aave_1328 PF02441 Flavoprotein Aave_1329 PF00692 dUTPase Aave_1331 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Aave_1332 PF08007 Cupin superfamily protein Aave_1335 PF00753 Metallo-beta-lactamase superfamily Aave_1336 PF06804 NlpB/DapX lipoprotein Aave_1337 PF00701 Dihydrodipicolinate synthetase family Aave_1340 PF01751 Toprim domain Aave_1340 PF00986 DNA gyrase B subunit, carboxyl terminus Aave_1340 PF00204 DNA gyrase B Aave_1340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_1341 PF01464 Transglycosylase SLT domain Aave_1342 PF00521 DNA gyrase/topoisomerase IV, subunit A Aave_1343 PF02203 Tar ligand binding domain homologue Aave_1343 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_1343 PF00672 HAMP domain Aave_1344 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_1344 PF02203 Tar ligand binding domain homologue Aave_1344 PF00672 HAMP domain Aave_1345 PF08543 Phosphomethylpyrimidine kinase Aave_1352 PF00753 Metallo-beta-lactamase superfamily Aave_1352 PF03772 Competence protein Aave_1353 PF14403 Circularly permuted ATP-grasp type 2 Aave_1357 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Aave_1357 PF05221 S-adenosyl-L-homocysteine hydrolase Aave_1359 PF09905 DNA-binding protein VF530 Aave_1360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_1360 PF03466 LysR substrate binding domain Aave_1361 PF07859 alpha/beta hydrolase fold Aave_1362 PF13533 Biotin-lipoyl like Aave_1363 PF00873 AcrB/AcrD/AcrF family Aave_1364 PF02321 Outer membrane efflux protein Aave_1365 PF00171 Aldehyde dehydrogenase family Aave_1367 PF00593 TonB dependent receptor Aave_1367 PF07715 TonB-dependent Receptor Plug Domain Aave_1372 PF00593 TonB dependent receptor Aave_1372 PF07660 Secretin and TonB N terminus short domain Aave_1372 PF07715 TonB-dependent Receptor Plug Domain Aave_1374 PF00210 Ferritin-like domain Aave_1375 PF00578 AhpC/TSA family Aave_1375 PF10417 C-terminal domain of 1-Cys peroxiredoxin Aave_1376 PF13192 Thioredoxin domain Aave_1376 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_1377 PF04185 Phosphoesterase family Aave_1377 PF05506 Domain of unknown function (DUF756) Aave_1381 PF03618 Kinase/pyrophosphorylase Aave_1382 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Aave_1382 PF02896 PEP-utilising enzyme, TIM barrel domain Aave_1382 PF00391 PEP-utilising enzyme, mobile domain Aave_1384 PF00474 Sodium:solute symporter family Aave_1387 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Aave_1389 PF02515 CoA-transferase family III Aave_1390 PF00892 EamA-like transporter family Aave_1391 PF06903 VirK protein Aave_1392 PF03466 LysR substrate binding domain Aave_1392 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_1393 PF00701 Dihydrodipicolinate synthetase family Aave_1395 PF03401 Tripartite tricarboxylate transporter family receptor Aave_1397 PF13378 Enolase C-terminal domain-like Aave_1400 PF08546 Ketopantoate reductase PanE/ApbA C terminal Aave_1400 PF02558 Ketopantoate reductase PanE/ApbA Aave_1405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_1405 PF00672 HAMP domain Aave_1405 PF02203 Tar ligand binding domain homologue Aave_1406 PF04545 Sigma-70, region 4 Aave_1406 PF03979 Sigma-70 factor, region 1.1 Aave_1406 PF00140 Sigma-70 factor, region 1.2 Aave_1406 PF04539 Sigma-70 region 3 Aave_1406 PF04542 Sigma-70 region 2 Aave_1406 PF04546 Sigma-70, non-essential region Aave_1407 PF08278 DNA primase DnaG DnaB-binding Aave_1407 PF13662 Toprim domain Aave_1407 PF08275 DNA primase catalytic core, N-terminal domain Aave_1407 PF10410 DnaB-helicase binding domain of primase Aave_1407 PF01807 CHC2 zinc finger Aave_1408 PF00563 EAL domain Aave_1408 PF00990 Diguanylate cyclase, GGDEF domain Aave_1408 PF03707 Bacterial signalling protein N terminal repeat Aave_1408 PF13188 PAS domain Aave_1409 PF03480 Bacterial extracellular solute-binding protein, family 7 Aave_1411 PF09423 PhoD-like phosphatase Aave_1411 PF16655 PhoD-like phosphatase, N-terminal domain Aave_1412 PF00072 Response regulator receiver domain Aave_1412 PF00990 Diguanylate cyclase, GGDEF domain Aave_1413 PF00107 Zinc-binding dehydrogenase Aave_1413 PF08240 Alcohol dehydrogenase GroES-like domain Aave_1413 PF02801 Beta-ketoacyl synthase, C-terminal domain Aave_1413 PF00698 Acyl transferase domain Aave_1413 PF08659 KR domain Aave_1413 PF00109 Beta-ketoacyl synthase, N-terminal domain Aave_1413 PF14765 Polyketide synthase dehydratase Aave_1413 PF00550 Phosphopantetheine attachment site Aave_1413 PF16197 Ketoacyl-synthetase C-terminal extension Aave_1414 PF01975 Survival protein SurE Aave_1416 PF01551 Peptidase family M23 Aave_1416 PF01476 LysM domain Aave_1417 PF00849 RNA pseudouridylate synthase Aave_1417 PF01479 S4 domain Aave_1418 PF04079 Segregation and condensation complex subunit ScpB Aave_1419 PF01479 S4 domain Aave_1419 PF00849 RNA pseudouridylate synthase Aave_1420 PF00334 Nucleoside diphosphate kinase Aave_1421 PF04055 Radical SAM superfamily Aave_1424 PF04551 GcpE protein Aave_1425 PF03129 Anticodon binding domain Aave_1425 PF13393 Histidyl-tRNA synthetase Aave_1427 PF13360 PQQ-like domain Aave_1428 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Aave_1428 PF01926 50S ribosome-binding GTPase Aave_1429 PF17209 Hfq protein Aave_1430 PF13167 GTP-binding GTPase N-terminal Aave_1430 PF01926 50S ribosome-binding GTPase Aave_1430 PF16360 GTP-binding GTPase Middle Region Aave_1431 PF01145 SPFH domain / Band 7 family Aave_1431 PF12221 Bacterial membrane protein N terminal Aave_1432 PF01145 SPFH domain / Band 7 family Aave_1433 PF13393 Histidyl-tRNA synthetase Aave_1434 PF00709 Adenylosuccinate synthetase Aave_1435 PF00156 Phosphoribosyl transferase domain Aave_1436 PF00849 RNA pseudouridylate synthase Aave_1436 PF01479 S4 domain Aave_1444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_1444 PF00989 PAS fold Aave_1444 PF00512 His Kinase A (phospho-acceptor) domain Aave_1445 PF02954 Bacterial regulatory protein, Fis family Aave_1445 PF00072 Response regulator receiver domain Aave_1445 PF00158 Sigma-54 interaction domain Aave_1447 PF03372 Endonuclease/Exonuclease/phosphatase family Aave_1448 PF00186 Dihydrofolate reductase Aave_1450 PF00303 Thymidylate synthase Aave_1452 PF01565 FAD binding domain Aave_1452 PF02913 FAD linked oxidases, C-terminal domain Aave_1454 PF03631 Virulence factor BrkB Aave_1455 PF01593 Flavin containing amine oxidoreductase Aave_1457 PF00004 ATPase family associated with various cellular activities (AAA) Aave_1457 PF05362 Lon protease (S16) C-terminal proteolytic domain Aave_1457 PF02190 ATP-dependent protease La (LON) substrate-binding domain Aave_1458 PF07724 AAA domain (Cdc48 subfamily) Aave_1458 PF10431 C-terminal, D2-small domain, of ClpB protein Aave_1458 PF06689 ClpX C4-type zinc finger Aave_1459 PF00574 Clp protease Aave_1460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Aave_1460 PF05698 Bacterial trigger factor protein (TF) C-terminus Aave_1460 PF05697 Bacterial trigger factor protein (TF) Aave_1461 PF00873 AcrB/AcrD/AcrF family Aave_1462 PF13533 Biotin-lipoyl like Aave_1466 PF03793 PASTA domain Aave_1466 PF00069 Protein kinase domain Aave_1472 PF00691 OmpA family Aave_1472 PF13488 Glycine zipper Aave_1482 PF17871 AAA lid domain Aave_1482 PF07724 AAA domain (Cdc48 subfamily) Aave_1482 PF00004 ATPase family associated with various cellular activities (AAA) Aave_1482 PF10431 C-terminal, D2-small domain, of ClpB protein Aave_1484 PF01863 Protein of unknown function DUF45 Aave_1485 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Aave_1485 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Aave_1486 PF03450 CO dehydrogenase flavoprotein C-terminal domain Aave_1486 PF00941 FAD binding domain in molybdopterin dehydrogenase Aave_1488 PF01177 Asp/Glu/Hydantoin racemase Aave_1490 PF00563 EAL domain Aave_1490 PF00990 Diguanylate cyclase, GGDEF domain Aave_1490 PF03707 Bacterial signalling protein N terminal repeat Aave_1491 PF10415 Fumarase C C-terminus Aave_1491 PF00206 Lyase Aave_1493 PF00072 Response regulator receiver domain Aave_1493 PF00486 Transcriptional regulatory protein, C terminal Aave_1494 PF00512 His Kinase A (phospho-acceptor) domain Aave_1494 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_1494 PF00672 HAMP domain Aave_1495 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Aave_1496 PF00528 Binding-protein-dependent transport system inner membrane component Aave_1497 PF00005 ABC transporter Aave_1497 PF00571 CBS domain Aave_1498 PF03350 Uncharacterized protein family, UPF0114 Aave_1499 PF00501 AMP-binding enzyme Aave_1499 PF16177 Acetyl-coenzyme A synthetase N-terminus Aave_1499 PF13193 AMP-binding enzyme C-terminal domain Aave_1504 PF00034 Cytochrome c Aave_1506 PF00920 Dehydratase family Aave_1507 PF00210 Ferritin-like domain Aave_1508 PF13018 Extended Signal Peptide of Type V secretion system Aave_1508 PF02661 Fic/DOC family Aave_1508 PF13332 Hemagglutinin repeat Aave_1508 PF05860 haemagglutination activity domain Aave_1508 PF03543 Yersinia/Haemophilus virulence surface antigen Aave_1509 PF01790 Prolipoprotein diacylglyceryl transferase Aave_1510 PF00392 Bacterial regulatory proteins, gntR family Aave_1510 PF07729 FCD domain Aave_1513 PF03401 Tripartite tricarboxylate transporter family receptor Aave_1514 PF00378 Enoyl-CoA hydratase/isomerase Aave_1515 PF00501 AMP-binding enzyme Aave_1515 PF13193 AMP-binding enzyme C-terminal domain Aave_1516 PF03543 Yersinia/Haemophilus virulence surface antigen Aave_1516 PF05860 haemagglutination activity domain Aave_1516 PF13332 Hemagglutinin repeat Aave_1516 PF02661 Fic/DOC family Aave_1516 PF13018 Extended Signal Peptide of Type V secretion system Aave_1519 PF00582 Universal stress protein family Aave_1521 PF00403 Heavy-metal-associated domain Aave_1523 PF00115 Cytochrome C and Quinol oxidase polypeptide I Aave_1526 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Aave_1526 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Aave_1527 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Aave_1527 PF12801 4Fe-4S binding domain Aave_1527 PF13746 4Fe-4S dicluster domain Aave_1530 PF13545 Crp-like helix-turn-helix domain Aave_1530 PF00027 Cyclic nucleotide-binding domain Aave_1531 PF04055 Radical SAM superfamily Aave_1531 PF06969 HemN C-terminal domain Aave_1533 PF00072 Response regulator receiver domain Aave_1534 PF00990 Diguanylate cyclase, GGDEF domain Aave_1534 PF03707 Bacterial signalling protein N terminal repeat Aave_1534 PF00563 EAL domain Aave_1537 PF00593 TonB dependent receptor Aave_1537 PF07715 TonB-dependent Receptor Plug Domain Aave_1538 PF07685 CobB/CobQ-like glutamine amidotransferase domain Aave_1538 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aave_1539 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Aave_1541 PF01032 FecCD transport family Aave_1542 PF00005 ABC transporter Aave_1543 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Aave_1543 PF12557 Cob(I)alamin adenosyltransferase N terminal Aave_1544 PF00881 Nitroreductase family Aave_1545 PF03186 CobD/Cbib protein Aave_1548 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA Aave_1552 PF07685 CobB/CobQ-like glutamine amidotransferase domain Aave_1552 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aave_1553 PF02277 Phosphoribosyltransferase Aave_1557 PF05598 Transposase domain (DUF772) Aave_1557 PF01609 Transposase DDE domain Aave_1559 PF00083 Sugar (and other) transporter Aave_1561 PF00583 Acetyltransferase (GNAT) family Aave_1562 PF00730 HhH-GPD superfamily base excision DNA repair protein Aave_1562 PF10576 Iron-sulfur binding domain of endonuclease III Aave_1562 PF00633 Helix-hairpin-helix motif Aave_1563 PF00155 Aminotransferase class I and II Aave_1565 PF00248 Aldo/keto reductase family Aave_1567 PF00271 Helicase conserved C-terminal domain Aave_1567 PF00270 DEAD/DEAH box helicase Aave_1571 PF04405 Domain of Unknown function (DUF542) Aave_1571 PF01814 Hemerythrin HHE cation binding domain Aave_1572 PF02082 Transcriptional regulator Aave_1573 PF03466 LysR substrate binding domain Aave_1573 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_1574 PF01810 LysE type translocator Aave_1575 PF03180 NLPA lipoprotein Aave_1578 PF07519 Tannase and feruloyl esterase Aave_1580 PF00271 Helicase conserved C-terminal domain Aave_1580 PF00270 DEAD/DEAH box helicase Aave_1580 PF17757 UvrB interaction domain Aave_1580 PF02559 CarD-like/TRCF domain Aave_1580 PF03461 TRCF domain Aave_1581 PF02542 YgbB family Aave_1581 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Aave_1582 PF02542 YgbB family Aave_1582 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Aave_1583 PF00672 HAMP domain Aave_1583 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_1583 PF00512 His Kinase A (phospho-acceptor) domain Aave_1584 PF00486 Transcriptional regulatory protein, C terminal Aave_1584 PF00072 Response regulator receiver domain Aave_1586 PF00106 short chain dehydrogenase Aave_1588 PF02824 TGS domain Aave_1588 PF04607 Region found in RelA / SpoT proteins Aave_1588 PF13291 ACT domain Aave_1595 PF01965 DJ-1/PfpI family Aave_1597 PF05233 PHB accumulation regulatory domain Aave_1597 PF07879 PHB/PHA accumulation regulator DNA-binding domain Aave_1601 PF02195 ParB-like nuclease domain Aave_1601 PF17762 HTH domain found in ParB protein Aave_1607 PF00717 Peptidase S24-like Aave_1607 PF01381 Helix-turn-helix Aave_1628 PF06791 Prophage tail length tape measure protein Aave_1645 PF04055 Radical SAM superfamily Aave_1645 PF18693 TRAM domain Aave_1645 PF00919 Uncharacterized protein family UPF0004 Aave_1646 PF07690 Major Facilitator Superfamily Aave_1648 PF09285 Elongation factor P, C-terminal Aave_1648 PF08207 Elongation factor P (EF-P) KOW-like domain Aave_1648 PF01132 Elongation factor P (EF-P) OB domain Aave_1651 PF02515 CoA-transferase family III Aave_1652 PF00682 HMGL-like Aave_1653 PF03401 Tripartite tricarboxylate transporter family receptor Aave_1654 PF03401 Tripartite tricarboxylate transporter family receptor Aave_1656 PF01112 Asparaginase Aave_1657 PF00005 ABC transporter Aave_1657 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aave_1658 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aave_1659 PF00528 Binding-protein-dependent transport system inner membrane component Aave_1660 PF12911 N-terminal TM domain of oligopeptide transport permease C Aave_1660 PF00528 Binding-protein-dependent transport system inner membrane component Aave_1661 PF03576 Peptidase family S58 Aave_1664 PF08459 UvrC Helix-hairpin-helix N-terminal Aave_1664 PF01541 GIY-YIG catalytic domain Aave_1665 PF01066 CDP-alcohol phosphatidyltransferase Aave_1666 PF00216 Bacterial DNA-binding protein Aave_1680 PF00145 C-5 cytosine-specific DNA methylase Aave_1691 PF03354 Phage Terminase Aave_1698 PF10668 Phage terminase small subunit Aave_1698 PF03592 Terminase small subunit Aave_1719 PF12441 CopG antitoxin of type II toxin-antitoxin system Aave_1740 PF00145 C-5 cytosine-specific DNA methylase Aave_1750 PF01381 Helix-turn-helix Aave_1750 PF00717 Peptidase S24-like Aave_1782 PF06791 Prophage tail length tape measure protein Aave_1796 PF02254 TrkA-N domain Aave_1796 PF00999 Sodium/hydrogen exchanger family Aave_1798 PF00271 Helicase conserved C-terminal domain Aave_1798 PF00270 DEAD/DEAH box helicase Aave_1800 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Aave_1800 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Aave_1801 PF00005 ABC transporter Aave_1801 PF12848 ABC transporter Aave_1804 PF03576 Peptidase family S58 Aave_1807 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_1807 PF03466 LysR substrate binding domain Aave_1810 PF00394 Multicopper oxidase Aave_1810 PF07731 Multicopper oxidase Aave_1810 PF07732 Multicopper oxidase Aave_1815 PF00403 Heavy-metal-associated domain Aave_1816 PF13411 MerR HTH family regulatory protein Aave_1821 PF03853 YjeF-related protein N-terminus Aave_1821 PF01256 Carbohydrate kinase Aave_1822 PF01266 FAD dependent oxidoreductase Aave_1823 PF00318 Ribosomal protein S2 Aave_1824 PF00889 Elongation factor TS Aave_1825 PF00696 Amino acid kinase family Aave_1826 PF01765 Ribosome recycling factor Aave_1827 PF01255 Putative undecaprenyl diphosphate synthase Aave_1829 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Aave_1829 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Aave_1829 PF13288 DXP reductoisomerase C-terminal domain Aave_1830 PF17820 PDZ domain Aave_1830 PF02163 Peptidase family M50 Aave_1831 PF01103 Surface antigen Aave_1831 PF07244 Surface antigen variable number repeat Aave_1833 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Aave_1833 PF00132 Bacterial transferase hexapeptide (six repeats) Aave_1834 PF07977 FabA-like domain Aave_1835 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Aave_1835 PF00132 Bacterial transferase hexapeptide (six repeats) Aave_1836 PF02684 Lipid-A-disaccharide synthetase Aave_1837 PF01351 Ribonuclease HII Aave_1838 PF08032 RNA 2'-O ribose methyltransferase substrate binding Aave_1838 PF00588 SpoU rRNA Methylase family Aave_1839 PF02515 CoA-transferase family III Aave_1840 PF03401 Tripartite tricarboxylate transporter family receptor Aave_1841 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_1841 PF18158 Adaptive response protein AidB N-terminal domain Aave_1841 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_1842 PF03466 LysR substrate binding domain Aave_1842 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_1843 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Aave_1844 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Aave_1844 PF11940 Domain of unknown function (DUF3458) Ig-like fold Aave_1844 PF01433 Peptidase family M1 domain Aave_1846 PF02463 RecF/RecN/SMC N terminal domain Aave_1847 PF00472 RF-1 domain Aave_1847 PF03462 PCRF domain Aave_1848 PF06827 Zinc finger found in FPG and IleRS Aave_1848 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Aave_1848 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Aave_1849 PF00248 Aldo/keto reductase family Aave_1850 PF04073 Aminoacyl-tRNA editing domain Aave_1851 PF02660 Glycerol-3-phosphate acyltransferase Aave_1854 PF04461 Protein of unknown function (DUF520) Aave_1855 PF01565 FAD binding domain Aave_1855 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Aave_1856 PF00764 Arginosuccinate synthase Aave_1857 PF06865 Pyrimidine/purine nucleoside phosphorylase Aave_1859 PF03960 ArsC family Aave_1860 PF08245 Mur ligase middle domain Aave_1860 PF02875 Mur ligase family, glutamate ligase domain Aave_1862 PF02674 Colicin V production protein Aave_1863 PF00156 Phosphoribosyl transferase domain Aave_1864 PF01053 Cys/Met metabolism PLP-dependent enzyme Aave_1865 PF00749 tRNA synthetases class I (E and Q), catalytic domain Aave_1867 PF07690 Major Facilitator Superfamily Aave_1868 PF07690 Major Facilitator Superfamily Aave_1872 PF03167 Uracil DNA glycosylase superfamily Aave_1873 PF12002 MgsA AAA+ ATPase C terminal Aave_1873 PF00004 ATPase family associated with various cellular activities (AAA) Aave_1873 PF16193 AAA C-terminal domain Aave_1874 PF02203 Tar ligand binding domain homologue Aave_1874 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_1874 PF00672 HAMP domain Aave_1875 PF02653 Branched-chain amino acid transport system / permease component Aave_1876 PF02653 Branched-chain amino acid transport system / permease component Aave_1876 PF11862 Domain of unknown function (DUF3382) Aave_1877 PF12399 Branched-chain amino acid ATP-binding cassette transporter Aave_1877 PF00005 ABC transporter Aave_1878 PF00005 ABC transporter Aave_1879 PF00691 OmpA family Aave_1879 PF01389 OmpA-like transmembrane domain Aave_1880 PF01865 Protein of unknown function DUF47 Aave_1881 PF01384 Phosphate transporter family Aave_1884 PF00886 Ribosomal protein S16 Aave_1885 PF05239 PRC-barrel domain Aave_1885 PF01782 RimM N-terminal domain Aave_1886 PF01746 tRNA (Guanine-1)-methyltransferase Aave_1887 PF01245 Ribosomal protein L19 Aave_1888 PF00293 NUDIX domain Aave_1889 PF17113 Regulatory signalling modulator protein AmpE Aave_1889 PF03186 CobD/Cbib protein Aave_1890 PF03193 RsgA GTPase Aave_1891 PF01329 Pterin 4 alpha carbinolamine dehydratase Aave_1892 PF01435 Peptidase family M48 Aave_1893 PF00929 Exonuclease Aave_1894 PF00271 Helicase conserved C-terminal domain Aave_1894 PF00270 DEAD/DEAH box helicase Aave_1895 PF08447 PAS fold Aave_1895 PF08448 PAS fold Aave_1895 PF00563 EAL domain Aave_1895 PF00990 Diguanylate cyclase, GGDEF domain Aave_1895 PF05231 MASE1 Aave_1895 PF13426 PAS domain Aave_1896 PF07690 Major Facilitator Superfamily Aave_1899 PF04963 Sigma-54 factor, core binding domain Aave_1899 PF04552 Sigma-54, DNA binding domain Aave_1899 PF00309 Sigma-54 factor, Activator interacting domain (AID) Aave_1900 PF00989 PAS fold Aave_1900 PF00512 His Kinase A (phospho-acceptor) domain Aave_1900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_1900 PF16736 Single Cache-like Aave_1901 PF02954 Bacterial regulatory protein, Fis family Aave_1901 PF00072 Response regulator receiver domain Aave_1901 PF00158 Sigma-54 interaction domain Aave_1905 PF13340 Putative transposase of IS4/5 family (DUF4096) Aave_1908 PF01609 Transposase DDE domain Aave_1911 PF00478 IMP dehydrogenase / GMP reductase domain Aave_1913 PF03401 Tripartite tricarboxylate transporter family receptor Aave_1914 PF07687 Peptidase dimerisation domain Aave_1914 PF01546 Peptidase family M20/M25/M40 Aave_1916 PF13361 UvrD-like helicase C-terminal domain Aave_1916 PF00580 UvrD/REP helicase N-terminal domain Aave_1928 PF01636 Phosphotransferase enzyme family Aave_1930 PF00476 DNA polymerase family A Aave_1930 PF01367 5'-3' exonuclease, C-terminal SAM fold Aave_1930 PF01612 3'-5' exonuclease Aave_1930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Aave_1935 PF03466 LysR substrate binding domain Aave_1935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_1936 PF01266 FAD dependent oxidoreductase Aave_1937 PF00497 Bacterial extracellular solute-binding proteins, family 3 Aave_1943 PF01738 Dienelactone hydrolase family Aave_1945 PF00206 Lyase Aave_1945 PF14698 Argininosuccinate lyase C-terminal Aave_1947 PF00072 Response regulator receiver domain Aave_1947 PF04397 LytTr DNA-binding domain Aave_1948 PF07694 5TMR of 5TMR-LYT Aave_1948 PF06580 Histidine kinase Aave_1949 PF00206 Lyase Aave_1949 PF14698 Argininosuccinate lyase C-terminal Aave_1950 PF03401 Tripartite tricarboxylate transporter family receptor Aave_1956 PF00672 HAMP domain Aave_1956 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_1956 PF02203 Tar ligand binding domain homologue Aave_1957 PF00905 Penicillin binding protein transpeptidase domain Aave_1957 PF14814 Bifunctional transglycosylase second domain Aave_1957 PF00912 Transglycosylase Aave_1959 PF01070 FMN-dependent dehydrogenase Aave_1960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_1960 PF00672 HAMP domain Aave_1960 PF02203 Tar ligand binding domain homologue Aave_1964 PF11799 impB/mucB/samB family C-terminal domain Aave_1964 PF00817 impB/mucB/samB family Aave_1966 PF01965 DJ-1/PfpI family Aave_1967 PF01965 DJ-1/PfpI family Aave_1970 PF00586 AIR synthase related protein, N-terminal domain Aave_1970 PF02769 AIR synthase related protein, C-terminal domain Aave_1971 PF00308 Bacterial dnaA protein Aave_1973 PF01743 Poly A polymerase head domain Aave_1973 PF12626 Polymerase A arginine-rich C-terminus Aave_1973 PF12627 Probable RNA and SrmB- binding site of polymerase A Aave_1974 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Aave_1975 PF03401 Tripartite tricarboxylate transporter family receptor Aave_1977 PF00111 2Fe-2S iron-sulfur cluster binding domain Aave_1977 PF00970 Oxidoreductase FAD-binding domain Aave_1977 PF00175 Oxidoreductase NAD-binding domain Aave_1981 PF02515 CoA-transferase family III Aave_1982 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_1982 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_1982 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_1983 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_1983 PF03466 LysR substrate binding domain Aave_1987 PF00291 Pyridoxal-phosphate dependent enzyme Aave_1988 PF09297 NADH pyrophosphatase zinc ribbon domain Aave_1988 PF00293 NUDIX domain Aave_1988 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Aave_1989 PF01206 Sulfurtransferase TusA Aave_1991 PF00483 Nucleotidyl transferase Aave_1993 PF01435 Peptidase family M48 Aave_1995 PF00005 ABC transporter Aave_1995 PF12848 ABC transporter Aave_1999 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Aave_1999 PF03900 Porphobilinogen deaminase, C-terminal domain Aave_2000 PF00311 Phosphoenolpyruvate carboxylase Aave_2001 PF12805 FUSC-like inner membrane protein yccS Aave_2002 PF01594 AI-2E family transporter Aave_2005 PF05280 Flagellar transcriptional activator (FlhC) Aave_2006 PF05247 Flagellar transcriptional activator (FlhD) Aave_2007 PF00296 Luciferase-like monooxygenase Aave_2008 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_2008 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Aave_2008 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_2009 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Aave_2009 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_2010 PF00581 Rhodanese-like domain Aave_2012 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Aave_2012 PF00355 Rieske [2Fe-2S] domain Aave_2013 PF02609 Exonuclease VII small subunit Aave_2014 PF00348 Polyprenyl synthetase Aave_2015 PF02779 Transketolase, pyrimidine binding domain Aave_2015 PF02780 Transketolase, C-terminal domain Aave_2015 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Aave_2016 PF03480 Bacterial extracellular solute-binding protein, family 7 Aave_2018 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Aave_2021 PF05552 Conserved TM helix Aave_2022 PF16657 Maltogenic Amylase, C-terminal domain Aave_2022 PF00128 Alpha amylase, catalytic domain Aave_2023 PF00128 Alpha amylase, catalytic domain Aave_2023 PF11896 Domain of unknown function (DUF3416) Aave_2024 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Aave_2024 PF00128 Alpha amylase, catalytic domain Aave_2024 PF02806 Alpha amylase, C-terminal all-beta domain Aave_2025 PF02028 BCCT, betaine/carnitine/choline family transporter Aave_2026 PF03459 TOBE domain Aave_2026 PF00005 ABC transporter Aave_2027 PF00528 Binding-protein-dependent transport system inner membrane component Aave_2030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2030 PF03459 TOBE domain Aave_2032 PF00005 ABC transporter Aave_2035 PF00072 Response regulator receiver domain Aave_2035 PF04397 LytTr DNA-binding domain Aave_2036 PF06580 Histidine kinase Aave_2036 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2036 PF07694 5TMR of 5TMR-LYT Aave_2038 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Aave_2039 PF00873 AcrB/AcrD/AcrF family Aave_2040 PF00873 AcrB/AcrD/AcrF family Aave_2041 PF02321 Outer membrane efflux protein Aave_2042 PF02673 Bacitracin resistance protein BacA Aave_2043 PF08447 PAS fold Aave_2043 PF08448 PAS fold Aave_2043 PF00990 Diguanylate cyclase, GGDEF domain Aave_2043 PF00563 EAL domain Aave_2043 PF05231 MASE1 Aave_2043 PF13426 PAS domain Aave_2047 PF04717 Type VI secretion system, phage-baseplate injector Aave_2049 PF14220 Domain of unknown function (DUF4329) Aave_2049 PF05593 RHS Repeat Aave_2049 PF03527 RHS protein Aave_2052 PF00488 MutS domain V Aave_2052 PF01624 MutS domain I Aave_2052 PF05188 MutS domain II Aave_2052 PF05192 MutS domain III Aave_2052 PF05190 MutS family domain IV Aave_2054 PF00593 TonB dependent receptor Aave_2054 PF07715 TonB-dependent Receptor Plug Domain Aave_2063 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Aave_2063 PF00072 Response regulator receiver domain Aave_2063 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2063 PF00512 His Kinase A (phospho-acceptor) domain Aave_2063 PF01627 Hpt domain Aave_2063 PF00672 HAMP domain Aave_2064 PF00072 Response regulator receiver domain Aave_2066 PF00664 ABC transporter transmembrane region Aave_2066 PF00005 ABC transporter Aave_2070 PF00459 Inositol monophosphatase family Aave_2073 PF00005 ABC transporter Aave_2074 PF00982 Glycosyltransferase family 20 Aave_2075 PF00588 SpoU rRNA Methylase family Aave_2076 PF00132 Bacterial transferase hexapeptide (six repeats) Aave_2077 PF00994 Probable molybdopterin binding domain Aave_2078 PF04751 Protein of unknown function (DUF615) Aave_2079 PF01523 Putative modulator of DNA gyrase Aave_2080 PF03328 HpcH/HpaI aldolase/citrate lyase family Aave_2081 PF00171 Aldehyde dehydrogenase family Aave_2082 PF08666 SAF domain Aave_2082 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Aave_2083 PF03401 Tripartite tricarboxylate transporter family receptor Aave_2084 PF03466 LysR substrate binding domain Aave_2084 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2085 PF07690 Major Facilitator Superfamily Aave_2086 PF01734 Patatin-like phospholipase Aave_2087 PF00180 Isocitrate/isopropylmalate dehydrogenase Aave_2088 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2088 PF03466 LysR substrate binding domain Aave_2090 PF00043 Glutathione S-transferase, C-terminal domain Aave_2090 PF02798 Glutathione S-transferase, N-terminal domain Aave_2091 PF09424 Yqey-like protein Aave_2092 PF01165 Ribosomal protein S21 Aave_2100 PF00484 Carbonic anhydrase Aave_2101 PF03061 Thioesterase superfamily Aave_2102 PF00150 Cellulase (glycosyl hydrolase family 5) Aave_2102 PF00553 Cellulose binding domain Aave_2103 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aave_2104 PF00591 Glycosyl transferase family, a/b domain Aave_2104 PF02885 Glycosyl transferase family, helical bundle domain Aave_2105 PF00384 Molybdopterin oxidoreductase Aave_2105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Aave_2105 PF01568 Molydopterin dinucleotide binding domain Aave_2106 PF00355 Rieske [2Fe-2S] domain Aave_2107 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_2107 PF18267 Rubredoxin NAD+ reductase C-terminal domain Aave_2107 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Aave_2107 PF04324 BFD-like [2Fe-2S] binding domain Aave_2107 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Aave_2108 PF00672 HAMP domain Aave_2108 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_2108 PF02203 Tar ligand binding domain homologue Aave_2110 PF02321 Outer membrane efflux protein Aave_2111 PF00873 AcrB/AcrD/AcrF family Aave_2112 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Aave_2112 PF00529 HlyD membrane-fusion protein of T1SS Aave_2113 PF08447 PAS fold Aave_2113 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_2114 PF00571 CBS domain Aave_2114 PF00478 IMP dehydrogenase / GMP reductase domain Aave_2115 PF00296 Luciferase-like monooxygenase Aave_2116 PF01039 Carboxyl transferase domain Aave_2117 PF01204 Trehalase Aave_2118 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2118 PF02895 Signal transducing histidine kinase, homodimeric domain Aave_2118 PF01627 Hpt domain Aave_2118 PF01584 CheW-like domain Aave_2119 PF00672 HAMP domain Aave_2119 PF16591 Helical bimodular sensor domain Aave_2119 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_2123 PF17755 UvrA DNA-binding domain Aave_2124 PF07690 Major Facilitator Superfamily Aave_2127 PF04717 Type VI secretion system, phage-baseplate injector Aave_2139 PF01053 Cys/Met metabolism PLP-dependent enzyme Aave_2141 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Aave_2144 PF01872 RibD C-terminal domain Aave_2145 PF00005 ABC transporter Aave_2146 PF00528 Binding-protein-dependent transport system inner membrane component Aave_2149 PF03861 ANTAR domain Aave_2149 PF00072 Response regulator receiver domain Aave_2151 PF00814 Glycoprotease family Aave_2154 PF13458 Periplasmic binding protein Aave_2158 PF07690 Major Facilitator Superfamily Aave_2160 PF13406 Transglycosylase SLT domain Aave_2161 PF13559 Domain of unknown function (DUF4129) Aave_2161 PF11992 Domain of unknown function (DUF3488) Aave_2161 PF01841 Transglutaminase-like superfamily Aave_2163 PF17863 AAA lid domain Aave_2163 PF07726 ATPase family associated with various cellular activities (AAA) Aave_2164 PF00850 Histone deacetylase domain Aave_2165 PF00378 Enoyl-CoA hydratase/isomerase Aave_2166 PF03421 YopJ Serine/Threonine acetyltransferase Aave_2167 PF12794 Mechanosensitive ion channel inner membrane domain 1 Aave_2167 PF00924 Mechanosensitive ion channel Aave_2167 PF12795 Mechanosensitive ion channel porin domain Aave_2168 PF01012 Electron transfer flavoprotein domain Aave_2169 PF00766 Electron transfer flavoprotein FAD-binding domain Aave_2169 PF01012 Electron transfer flavoprotein domain Aave_2170 PF12806 Acetyl-CoA dehydrogenase C-terminal like Aave_2170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_2170 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_2170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_2176 PF04055 Radical SAM superfamily Aave_2180 PF01037 Lrp/AsnC ligand binding domain Aave_2181 PF00202 Aminotransferase class-III Aave_2182 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aave_2186 PF01266 FAD dependent oxidoreductase Aave_2188 PF00528 Binding-protein-dependent transport system inner membrane component Aave_2189 PF00528 Binding-protein-dependent transport system inner membrane component Aave_2189 PF12911 N-terminal TM domain of oligopeptide transport permease C Aave_2190 PF00005 ABC transporter Aave_2190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aave_2191 PF00180 Isocitrate/isopropylmalate dehydrogenase Aave_2192 PF00171 Aldehyde dehydrogenase family Aave_2193 PF00884 Sulfatase Aave_2193 PF08019 Phosphoethanolamine transferase EptA/EptB Aave_2194 PF00756 Putative esterase Aave_2195 PF00107 Zinc-binding dehydrogenase Aave_2195 PF08240 Alcohol dehydrogenase GroES-like domain Aave_2196 PF12833 Helix-turn-helix domain Aave_2196 PF01965 DJ-1/PfpI family Aave_2197 PF13302 Acetyltransferase (GNAT) domain Aave_2199 PF00285 Citrate synthase, C-terminal domain Aave_2200 PF03937 Flavinator of succinate dehydrogenase Aave_2201 PF13085 2Fe-2S iron-sulfur cluster binding domain Aave_2202 PF00890 FAD binding domain Aave_2202 PF02910 Fumarate reductase flavoprotein C-term Aave_2205 PF07702 UTRA domain Aave_2205 PF00392 Bacterial regulatory proteins, gntR family Aave_2206 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Aave_2206 PF00056 lactate/malate dehydrogenase, NAD binding domain Aave_2207 PF13649 Methyltransferase domain Aave_2210 PF11791 Aconitate B N-terminal domain Aave_2210 PF06434 Aconitate hydratase 2 N-terminus Aave_2210 PF00330 Aconitase family (aconitate hydratase) Aave_2211 PF05992 SbmA/BacA-like family Aave_2215 PF03466 LysR substrate binding domain Aave_2215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2217 PF00072 Response regulator receiver domain Aave_2218 PF00989 PAS fold Aave_2218 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2220 PF03626 Prokaryotic Cytochrome C oxidase subunit IV Aave_2221 PF00510 Cytochrome c oxidase subunit III Aave_2222 PF00115 Cytochrome C and Quinol oxidase polypeptide I Aave_2223 PF06481 COX Aromatic Rich Motif Aave_2223 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Aave_2224 PF00083 Sugar (and other) transporter Aave_2224 PF07690 Major Facilitator Superfamily Aave_2226 PF02472 Biopolymer transport protein ExbD/TolR Aave_2227 PF01618 MotA/TolQ/ExbB proton channel family Aave_2228 PF03061 Thioesterase superfamily Aave_2229 PF00155 Aminotransferase class I and II Aave_2230 PF01029 NusB family Aave_2231 PF00885 6,7-dimethyl-8-ribityllumazine synthase Aave_2232 PF00925 GTP cyclohydrolase II Aave_2232 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Aave_2234 PF00111 2Fe-2S iron-sulfur cluster binding domain Aave_2236 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2236 PF00512 His Kinase A (phospho-acceptor) domain Aave_2236 PF00989 PAS fold Aave_2238 PF00072 Response regulator receiver domain Aave_2238 PF00486 Transcriptional regulatory protein, C terminal Aave_2239 PF00072 Response regulator receiver domain Aave_2239 PF01339 CheB methylesterase Aave_2241 PF00672 HAMP domain Aave_2241 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_2241 PF02203 Tar ligand binding domain homologue Aave_2244 PF13378 Enolase C-terminal domain-like Aave_2244 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Aave_2245 PF01081 KDPG and KHG aldolase Aave_2246 PF05035 2-keto-3-deoxy-galactonokinase Aave_2247 PF00701 Dihydrodipicolinate synthetase family Aave_2248 PF00920 Dehydratase family Aave_2249 PF02653 Branched-chain amino acid transport system / permease component Aave_2250 PF02653 Branched-chain amino acid transport system / permease component Aave_2251 PF00005 ABC transporter Aave_2252 PF02653 Branched-chain amino acid transport system / permease component Aave_2253 PF00005 ABC transporter Aave_2254 PF13407 Periplasmic binding protein domain Aave_2255 PF13407 Periplasmic binding protein domain Aave_2256 PF00171 Aldehyde dehydrogenase family Aave_2257 PF03466 LysR substrate binding domain Aave_2257 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2259 PF08450 SMP-30/Gluconolactonase/LRE-like region Aave_2262 PF04262 Glutamate-cysteine ligase Aave_2263 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Aave_2263 PF00205 Thiamine pyrophosphate enzyme, central domain Aave_2263 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Aave_2264 PF02463 RecF/RecN/SMC N terminal domain Aave_2266 PF01810 LysE type translocator Aave_2267 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2267 PF00512 His Kinase A (phospho-acceptor) domain Aave_2270 PF01926 50S ribosome-binding GTPase Aave_2271 PF13609 Gram-negative porin Aave_2274 PF07690 Major Facilitator Superfamily Aave_2276 PF00376 MerR family regulatory protein Aave_2276 PF09278 MerR, DNA binding Aave_2277 PF02308 MgtC family Aave_2278 PF00849 RNA pseudouridylate synthase Aave_2283 PF01547 Bacterial extracellular solute-binding protein Aave_2284 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_2284 PF02203 Tar ligand binding domain homologue Aave_2284 PF00672 HAMP domain Aave_2287 PF00849 RNA pseudouridylate synthase Aave_2290 PF13091 PLD-like domain Aave_2290 PF13396 Phospholipase_D-nuclease N-terminal Aave_2297 PF17932 Tetracyclin repressor-like, C-terminal domain Aave_2297 PF00440 Bacterial regulatory proteins, tetR family Aave_2300 PF00749 tRNA synthetases class I (E and Q), catalytic domain Aave_2300 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Aave_2302 PF01220 Dehydroquinase class II Aave_2304 PF00472 RF-1 domain Aave_2305 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Aave_2309 PF01037 Lrp/AsnC ligand binding domain Aave_2311 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2311 PF03466 LysR substrate binding domain Aave_2312 PF03401 Tripartite tricarboxylate transporter family receptor Aave_2314 PF06167 Glucose-regulated metallo-peptidase M90 Aave_2315 PF00149 Calcineurin-like phosphoesterase Aave_2316 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Aave_2317 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Aave_2320 PF09190 DALR domain Aave_2320 PF01406 tRNA synthetases class I (C) catalytic domain Aave_2321 PF02805 Metal binding domain of Ada Aave_2321 PF12833 Helix-turn-helix domain Aave_2321 PF00730 HhH-GPD superfamily base excision DNA repair protein Aave_2321 PF06029 AlkA N-terminal domain Aave_2322 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Aave_2323 PF01171 PP-loop family Aave_2323 PF09179 TilS substrate binding domain Aave_2324 PF13840 ACT domain Aave_2324 PF00696 Amino acid kinase family Aave_2324 PF01842 ACT domain Aave_2336 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Aave_2395 PF05707 Zonular occludens toxin (Zot) Aave_2396 PF00239 Resolvase, N terminal domain Aave_2397 PF01527 Transposase Aave_2398 PF00665 Integrase core domain Aave_2398 PF13333 Integrase core domain Aave_2398 PF13276 HTH-like domain Aave_2399 PF00239 Resolvase, N terminal domain Aave_2400 PF13333 Integrase core domain Aave_2400 PF13276 HTH-like domain Aave_2400 PF00665 Integrase core domain Aave_2401 PF01527 Transposase Aave_2417 PF08448 PAS fold Aave_2417 PF01739 CheR methyltransferase, SAM binding domain Aave_2417 PF01339 CheB methylesterase Aave_2417 PF03705 CheR methyltransferase, all-alpha domain Aave_2419 PF01479 S4 domain Aave_2420 PF07995 Glucose / Sorbosone dehydrogenase Aave_2424 PF03466 LysR substrate binding domain Aave_2424 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2428 PF00291 Pyridoxal-phosphate dependent enzyme Aave_2429 PF03401 Tripartite tricarboxylate transporter family receptor Aave_2430 PF01425 Amidase Aave_2431 PF01266 FAD dependent oxidoreductase Aave_2433 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_2433 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Aave_2434 PF09186 Domain of unknown function (DUF1949) Aave_2434 PF01205 Uncharacterized protein family UPF0029 Aave_2435 PF00127 Copper binding proteins, plastocyanin/azurin family Aave_2436 PF00672 HAMP domain Aave_2436 PF02203 Tar ligand binding domain homologue Aave_2436 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_2437 PF04055 Radical SAM superfamily Aave_2437 PF11842 Domain of unknown function (DUF3362) Aave_2437 PF08497 Radical SAM N-terminal Aave_2439 PF02515 CoA-transferase family III Aave_2440 PF00155 Aminotransferase class I and II Aave_2442 PF02082 Transcriptional regulator Aave_2443 PF00266 Aminotransferase class-V Aave_2444 PF01592 NifU-like N terminal domain Aave_2445 PF01521 Iron-sulphur cluster biosynthesis Aave_2446 PF07743 HSCB C-terminal oligomerisation domain Aave_2447 PF00012 Hsp70 protein Aave_2448 PF00111 2Fe-2S iron-sulfur cluster binding domain Aave_2449 PF00929 Exonuclease Aave_2450 PF00850 Histone deacetylase domain Aave_2451 PF01266 FAD dependent oxidoreductase Aave_2455 PF01180 Dihydroorotate dehydrogenase Aave_2456 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Aave_2458 PF01432 Peptidase family M3 Aave_2459 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Aave_2459 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Aave_2460 PF00196 Bacterial regulatory proteins, luxR family Aave_2460 PF00072 Response regulator receiver domain Aave_2461 PF00989 PAS fold Aave_2461 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2461 PF00512 His Kinase A (phospho-acceptor) domain Aave_2462 PF17831 Pyruvate dehydrogenase E1 component middle domain Aave_2462 PF00456 Transketolase, thiamine diphosphate binding domain Aave_2463 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Aave_2463 PF00364 Biotin-requiring enzyme Aave_2463 PF02817 e3 binding domain Aave_2464 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Aave_2464 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_2466 PF03401 Tripartite tricarboxylate transporter family receptor Aave_2468 PF17785 PUA-like domain Aave_2468 PF10672 S-adenosylmethionine-dependent methyltransferase Aave_2469 PF00912 Transglycosylase Aave_2469 PF00905 Penicillin binding protein transpeptidase domain Aave_2470 PF00497 Bacterial extracellular solute-binding proteins, family 3 Aave_2471 PF00069 Protein kinase domain Aave_2473 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aave_2474 PF13417 Glutathione S-transferase, N-terminal domain Aave_2477 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Aave_2478 PF00108 Thiolase, N-terminal domain Aave_2478 PF02803 Thiolase, C-terminal domain Aave_2479 PF00106 short chain dehydrogenase Aave_2481 PF05175 Methyltransferase small domain Aave_2482 PF01546 Peptidase family M20/M25/M40 Aave_2482 PF07687 Peptidase dimerisation domain Aave_2483 PF00437 Type II/IV secretion system protein Aave_2484 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Aave_2484 PF14602 Hexapeptide repeat of succinyl-transferase Aave_2485 PF00155 Aminotransferase class I and II Aave_2486 PF02203 Tar ligand binding domain homologue Aave_2486 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_2486 PF00672 HAMP domain Aave_2487 PF04060 Putative Fe-S cluster Aave_2490 PF00990 Diguanylate cyclase, GGDEF domain Aave_2490 PF03707 Bacterial signalling protein N terminal repeat Aave_2490 PF00563 EAL domain Aave_2491 PF01207 Dihydrouridine synthase (Dus) Aave_2493 PF01527 Transposase Aave_2494 PF01609 Transposase DDE domain Aave_2494 PF05598 Transposase domain (DUF772) Aave_2496 PF02203 Tar ligand binding domain homologue Aave_2496 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_2496 PF00672 HAMP domain Aave_2497 PF00072 Response regulator receiver domain Aave_2497 PF00196 Bacterial regulatory proteins, luxR family Aave_2504 PF02321 Outer membrane efflux protein Aave_2505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Aave_2505 PF00529 HlyD membrane-fusion protein of T1SS Aave_2506 PF00873 AcrB/AcrD/AcrF family Aave_2507 PF00563 EAL domain Aave_2507 PF00990 Diguanylate cyclase, GGDEF domain Aave_2507 PF03707 Bacterial signalling protein N terminal repeat Aave_2508 PF00563 EAL domain Aave_2508 PF00990 Diguanylate cyclase, GGDEF domain Aave_2508 PF03707 Bacterial signalling protein N terminal repeat Aave_2509 PF00392 Bacterial regulatory proteins, gntR family Aave_2509 PF07729 FCD domain Aave_2513 PF01039 Carboxyl transferase domain Aave_2515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Aave_2515 PF00289 Biotin carboxylase, N-terminal domain Aave_2515 PF02785 Biotin carboxylase C-terminal domain Aave_2518 PF04055 Radical SAM superfamily Aave_2518 PF06968 Biotin and Thiamin Synthesis associated domain Aave_2519 PF04679 ATP dependent DNA ligase C terminal region Aave_2519 PF01068 ATP dependent DNA ligase domain Aave_2519 PF13298 DNA polymerase Ligase (LigD) Aave_2520 PF02735 Ku70/Ku80 beta-barrel domain Aave_2523 PF03466 LysR substrate binding domain Aave_2523 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2525 PF00672 HAMP domain Aave_2525 PF00989 PAS fold Aave_2525 PF00512 His Kinase A (phospho-acceptor) domain Aave_2525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2525 PF18698 Histidine kinase sensor domain Aave_2526 PF00072 Response regulator receiver domain Aave_2526 PF00486 Transcriptional regulatory protein, C terminal Aave_2527 PF00529 HlyD membrane-fusion protein of T1SS Aave_2527 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Aave_2528 PF00873 AcrB/AcrD/AcrF family Aave_2529 PF02321 Outer membrane efflux protein Aave_2532 PF01451 Low molecular weight phosphotyrosine protein phosphatase Aave_2533 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2533 PF03466 LysR substrate binding domain Aave_2534 PF07690 Major Facilitator Superfamily Aave_2535 PF08448 PAS fold Aave_2535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2535 PF00512 His Kinase A (phospho-acceptor) domain Aave_2535 PF13188 PAS domain Aave_2535 PF00072 Response regulator receiver domain Aave_2536 PF00005 ABC transporter Aave_2536 PF09383 NIL domain Aave_2537 PF00528 Binding-protein-dependent transport system inner membrane component Aave_2538 PF00672 HAMP domain Aave_2538 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_2538 PF02203 Tar ligand binding domain homologue Aave_2539 PF03180 NLPA lipoprotein Aave_2540 PF03358 NADPH-dependent FMN reductase Aave_2541 PF02525 Flavodoxin-like fold Aave_2542 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2542 PF03466 LysR substrate binding domain Aave_2546 PF00528 Binding-protein-dependent transport system inner membrane component Aave_2547 PF00528 Binding-protein-dependent transport system inner membrane component Aave_2548 PF00005 ABC transporter Aave_2548 PF12857 TOBE-like domain Aave_2548 PF17850 CysA C-terminal regulatory domain Aave_2549 PF02600 Disulfide bond formation protein DsbB Aave_2551 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2551 PF03466 LysR substrate binding domain Aave_2553 PF00583 Acetyltransferase (GNAT) family Aave_2553 PF00696 Amino acid kinase family Aave_2554 PF01266 FAD dependent oxidoreductase Aave_2556 PF11898 Domain of unknown function (DUF3418) Aave_2556 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Aave_2556 PF04408 Helicase associated domain (HA2) Aave_2556 PF00271 Helicase conserved C-terminal domain Aave_2556 PF00270 DEAD/DEAH box helicase Aave_2558 PF01726 LexA DNA binding domain Aave_2558 PF00717 Peptidase S24-like Aave_2559 PF17763 Glutaminase/Asparaginase C-terminal domain Aave_2559 PF00710 Asparaginase, N-terminal Aave_2561 PF05191 Adenylate kinase, active site lid Aave_2562 PF02348 Cytidylyltransferase Aave_2563 PF03966 Trm112p-like protein Aave_2564 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Aave_2565 PF02472 Biopolymer transport protein ExbD/TolR Aave_2566 PF01618 MotA/TolQ/ExbB proton channel family Aave_2567 PF02601 Exonuclease VII, large subunit Aave_2567 PF13742 OB-fold nucleic acid binding domain Aave_2568 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Aave_2568 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Aave_2572 PF00180 Isocitrate/isopropylmalate dehydrogenase Aave_2573 PF03466 LysR substrate binding domain Aave_2573 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2574 PF00043 Glutathione S-transferase, C-terminal domain Aave_2574 PF02798 Glutathione S-transferase, N-terminal domain Aave_2575 PF01361 Tautomerase enzyme Aave_2578 PF07690 Major Facilitator Superfamily Aave_2579 PF00376 MerR family regulatory protein Aave_2579 PF09278 MerR, DNA binding Aave_2583 PF00082 Subtilase family Aave_2587 PF00701 Dihydrodipicolinate synthetase family Aave_2588 PF03401 Tripartite tricarboxylate transporter family receptor Aave_2590 PF01370 NAD dependent epimerase/dehydratase family Aave_2592 PF03480 Bacterial extracellular solute-binding protein, family 7 Aave_2594 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Aave_2595 PF08666 SAF domain Aave_2595 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Aave_2597 PF03401 Tripartite tricarboxylate transporter family receptor Aave_2598 PF07715 TonB-dependent Receptor Plug Domain Aave_2598 PF00593 TonB dependent receptor Aave_2599 PF00080 Copper/zinc superoxide dismutase (SODC) Aave_2600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Aave_2600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Aave_2602 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_2602 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_2602 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_2604 PF00171 Aldehyde dehydrogenase family Aave_2608 PF00324 Amino acid permease Aave_2610 PF00117 Glutamine amidotransferase class-I Aave_2610 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Aave_2611 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Aave_2611 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Aave_2611 PF02142 MGS-like domain Aave_2612 PF03449 Transcription elongation factor, N-terminal Aave_2612 PF01272 Transcription elongation factor, GreA/GreB, C-term Aave_2615 PF01985 CRS1 / YhbY (CRM) domain Aave_2616 PF01728 FtsJ-like methyltransferase Aave_2617 PF01434 Peptidase family M41 Aave_2617 PF00004 ATPase family associated with various cellular activities (AAA) Aave_2617 PF17862 AAA+ lid domain Aave_2617 PF06480 FtsH Extracellular Aave_2618 PF00809 Pterin binding enzyme Aave_2619 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Aave_2619 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Aave_2619 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Aave_2619 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Aave_2620 PF00990 Diguanylate cyclase, GGDEF domain Aave_2620 PF00563 EAL domain Aave_2620 PF03707 Bacterial signalling protein N terminal repeat Aave_2622 PF13090 Polyphosphate kinase C-terminal domain 2 Aave_2622 PF17941 Polyphosphate kinase C-terminal domain 1 Aave_2622 PF13089 Polyphosphate kinase N-terminal domain Aave_2622 PF02503 Polyphosphate kinase middle domain Aave_2623 PF00300 Histidine phosphatase superfamily (branch 1) Aave_2625 PF02541 Ppx/GppA phosphatase family Aave_2626 PF12849 PBP superfamily domain Aave_2627 PF00528 Binding-protein-dependent transport system inner membrane component Aave_2628 PF00528 Binding-protein-dependent transport system inner membrane component Aave_2629 PF00005 ABC transporter Aave_2630 PF01895 PhoU domain Aave_2631 PF00486 Transcriptional regulatory protein, C terminal Aave_2631 PF00072 Response regulator receiver domain Aave_2632 PF11808 Phosphate regulon sensor protein PhoR Aave_2632 PF00989 PAS fold Aave_2632 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2632 PF00512 His Kinase A (phospho-acceptor) domain Aave_2633 PF01554 MatE Aave_2635 PF01197 Ribosomal protein L31 Aave_2636 PF00149 Calcineurin-like phosphoesterase Aave_2636 PF12320 Type 5 capsule protein repressor C-terminal domain Aave_2637 PF13476 AAA domain Aave_2638 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aave_2638 PF07498 Rho termination factor, N-terminal domain Aave_2638 PF07497 Rho termination factor, RNA-binding domain Aave_2639 PF00085 Thioredoxin Aave_2641 PF00580 UvrD/REP helicase N-terminal domain Aave_2641 PF12705 PD-(D/E)XK nuclease superfamily Aave_2641 PF13361 UvrD-like helicase C-terminal domain Aave_2643 PF17200 Single Cache domain 2 Aave_2643 PF00672 HAMP domain Aave_2643 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_2644 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Aave_2644 PF12169 DNA polymerase III subunits gamma and tau domain III Aave_2644 PF12170 DNA polymerase III tau subunit V interacting with alpha Aave_2645 PF02575 YbaB/EbfC DNA-binding family Aave_2646 PF02132 RecR protein Aave_2646 PF13662 Toprim domain Aave_2650 PF01464 Transglycosylase SLT domain Aave_2650 PF01476 LysM domain Aave_2651 PF16123 Hydroxyacylglutathione hydrolase C-terminus Aave_2651 PF00753 Metallo-beta-lactamase superfamily Aave_2652 PF08241 Methyltransferase domain Aave_2653 PF00075 RNase H Aave_2656 PF03453 MoeA N-terminal region (domain I and II) Aave_2656 PF03454 MoeA C-terminal region (domain IV) Aave_2656 PF00994 Probable molybdopterin binding domain Aave_2658 PF12804 MobA-like NTP transferase domain Aave_2659 PF06463 Molybdenum Cofactor Synthesis C Aave_2659 PF04055 Radical SAM superfamily Aave_2662 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Aave_2662 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Aave_2663 PF02535 ZIP Zinc transporter Aave_2664 PF00171 Aldehyde dehydrogenase family Aave_2668 PF03030 Inorganic H+ pyrophosphatase Aave_2669 PF00719 Inorganic pyrophosphatase Aave_2672 PF02811 PHP domain Aave_2672 PF14579 Helix-hairpin-helix motif Aave_2672 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Aave_2672 PF07733 Bacterial DNA polymerase III alpha NTPase domain Aave_2673 PF05170 AsmA family Aave_2674 PF00849 RNA pseudouridylate synthase Aave_2676 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aave_2686 PF04434 SWIM zinc finger Aave_2686 PF00176 SNF2 family N-terminal domain Aave_2686 PF00271 Helicase conserved C-terminal domain Aave_2702 PF02796 Helix-turn-helix domain of resolvase Aave_2702 PF00239 Resolvase, N terminal domain Aave_2705 PF01526 Tn3 transposase DDE domain Aave_2705 PF13700 Domain of unknown function (DUF4158) Aave_2706 PF03695 Uncharacterised protein family (UPF0149) Aave_2706 PF02810 SEC-C motif Aave_2708 PF03421 YopJ Serine/Threonine acetyltransferase Aave_2709 PF13276 HTH-like domain Aave_2709 PF00665 Integrase core domain Aave_2709 PF13333 Integrase core domain Aave_2716 PF00437 Type II/IV secretion system protein Aave_2719 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Aave_2719 PF00437 Type II/IV secretion system protein Aave_2722 PF00437 Type II/IV secretion system protein Aave_2725 PF00263 Bacterial type II and III secretion system protein Aave_2725 PF07655 Secretin N-terminal domain Aave_2727 PF01464 Transglycosylase SLT domain Aave_2727 PF01551 Peptidase family M23 Aave_2727 PF10145 Phage-related minor tail protein Aave_2730 PF13098 Thioredoxin-like domain Aave_2730 PF10411 Disulfide bond isomerase protein N-terminus Aave_2731 PF00589 Phage integrase family Aave_2731 PF02899 Phage integrase, N-terminal SAM-like domain Aave_2732 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Aave_2732 PF14579 Helix-hairpin-helix motif Aave_2732 PF07733 Bacterial DNA polymerase III alpha NTPase domain Aave_2732 PF02811 PHP domain Aave_2735 PF04717 Type VI secretion system, phage-baseplate injector Aave_2740 PF05593 RHS Repeat Aave_2740 PF03527 RHS protein Aave_2749 PF08681 Protein of unknown function (DUF1778) Aave_2779 PF01717 Cobalamin-independent synthase, Catalytic domain Aave_2779 PF08267 Cobalamin-independent synthase, N-terminal domain Aave_2781 PF03358 NADPH-dependent FMN reductase Aave_2782 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_2782 PF03466 LysR substrate binding domain Aave_2783 PF00005 ABC transporter Aave_2788 PF00106 short chain dehydrogenase Aave_2791 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aave_2792 PF01081 KDPG and KHG aldolase Aave_2793 PF00920 Dehydratase family Aave_2794 PF03480 Bacterial extracellular solute-binding protein, family 7 Aave_2795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Aave_2796 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Aave_2798 PF00356 Bacterial regulatory proteins, lacI family Aave_2803 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Aave_2803 PF01243 Pyridoxamine 5'-phosphate oxidase Aave_2805 PF00171 Aldehyde dehydrogenase family Aave_2806 PF01266 FAD dependent oxidoreductase Aave_2807 PF07715 TonB-dependent Receptor Plug Domain Aave_2807 PF00593 TonB dependent receptor Aave_2812 PF00005 ABC transporter Aave_2814 PF01625 Peptide methionine sulfoxide reductase Aave_2815 PF00440 Bacterial regulatory proteins, tetR family Aave_2815 PF17922 Tetracyclin repressor-like, C-terminal domain Aave_2818 PF02321 Outer membrane efflux protein Aave_2819 PF00583 Acetyltransferase (GNAT) family Aave_2819 PF13380 CoA binding domain Aave_2819 PF13607 Succinyl-CoA ligase like flavodoxin domain Aave_2820 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Aave_2820 PF00534 Glycosyl transferases group 1 Aave_2822 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Aave_2822 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Aave_2822 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Aave_2822 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Aave_2823 PF00730 HhH-GPD superfamily base excision DNA repair protein Aave_2823 PF06029 AlkA N-terminal domain Aave_2823 PF02805 Metal binding domain of Ada Aave_2823 PF12833 Helix-turn-helix domain Aave_2824 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Aave_2824 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Aave_2826 PF03707 Bacterial signalling protein N terminal repeat Aave_2826 PF00990 Diguanylate cyclase, GGDEF domain Aave_2826 PF00563 EAL domain Aave_2827 PF16177 Acetyl-coenzyme A synthetase N-terminus Aave_2827 PF00501 AMP-binding enzyme Aave_2827 PF13193 AMP-binding enzyme C-terminal domain Aave_2829 PF07995 Glucose / Sorbosone dehydrogenase Aave_2830 PF00877 NlpC/P60 family Aave_2833 PF12419 SNF2 Helicase protein Aave_2833 PF00271 Helicase conserved C-terminal domain Aave_2833 PF00176 SNF2 family N-terminal domain Aave_2838 PF03527 RHS protein Aave_2838 PF05593 RHS Repeat Aave_2840 PF04717 Type VI secretion system, phage-baseplate injector Aave_2841 PF03120 NAD-dependent DNA ligase OB-fold domain Aave_2841 PF01653 NAD-dependent DNA ligase adenylation domain Aave_2841 PF00533 BRCA1 C Terminus (BRCT) domain Aave_2841 PF12826 Helix-hairpin-helix motif Aave_2841 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Aave_2843 PF06470 SMC proteins Flexible Hinge Domain Aave_2843 PF02463 RecF/RecN/SMC N terminal domain Aave_2845 PF02694 Uncharacterised BCR, YnfA/UPF0060 family Aave_2846 PF00563 EAL domain Aave_2846 PF00990 Diguanylate cyclase, GGDEF domain Aave_2846 PF03707 Bacterial signalling protein N terminal repeat Aave_2847 PF02040 Arsenical pump membrane protein Aave_2848 PF00005 ABC transporter Aave_2848 PF00664 ABC transporter transmembrane region Aave_2849 PF12464 Maltose acetyltransferase Aave_2849 PF14602 Hexapeptide repeat of succinyl-transferase Aave_2852 PF13411 MerR HTH family regulatory protein Aave_2853 PF00216 Bacterial DNA-binding protein Aave_2855 PF01409 tRNA synthetases class II core domain (F) Aave_2855 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Aave_2856 PF00453 Ribosomal protein L20 Aave_2857 PF01632 Ribosomal protein L35 Aave_2858 PF05198 Translation initiation factor IF-3, N-terminal domain Aave_2858 PF00707 Translation initiation factor IF-3, C-terminal domain Aave_2859 PF03129 Anticodon binding domain Aave_2859 PF02824 TGS domain Aave_2859 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aave_2859 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Aave_2860 PF00463 Isocitrate lyase family Aave_2863 PF01037 Lrp/AsnC ligand binding domain Aave_2864 PF00892 EamA-like transporter family Aave_2866 PF13416 Bacterial extracellular solute-binding protein Aave_2867 PF00106 short chain dehydrogenase Aave_2868 PF00106 short chain dehydrogenase Aave_2870 PF13673 Acetyltransferase (GNAT) domain Aave_2871 PF00107 Zinc-binding dehydrogenase Aave_2871 PF16884 N-terminal domain of oxidoreductase Aave_2877 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_2877 PF12806 Acetyl-CoA dehydrogenase C-terminal like Aave_2877 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_2877 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_2878 PF03061 Thioesterase superfamily Aave_2879 PF02803 Thiolase, C-terminal domain Aave_2879 PF00108 Thiolase, N-terminal domain Aave_2880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aave_2880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aave_2880 PF00378 Enoyl-CoA hydratase/isomerase Aave_2925 PF00563 EAL domain Aave_2925 PF03707 Bacterial signalling protein N terminal repeat Aave_2925 PF00990 Diguanylate cyclase, GGDEF domain Aave_2926 PF00990 Diguanylate cyclase, GGDEF domain Aave_2930 PF00005 ABC transporter Aave_2931 PF12399 Branched-chain amino acid ATP-binding cassette transporter Aave_2931 PF00005 ABC transporter Aave_2933 PF02653 Branched-chain amino acid transport system / permease component Aave_2936 PF01527 Transposase Aave_2937 PF13333 Integrase core domain Aave_2937 PF00665 Integrase core domain Aave_2937 PF13276 HTH-like domain Aave_2938 PF03421 YopJ Serine/Threonine acetyltransferase Aave_2940 PF03695 Uncharacterised protein family (UPF0149) Aave_2940 PF02810 SEC-C motif Aave_2941 PF13700 Domain of unknown function (DUF4158) Aave_2941 PF01526 Tn3 transposase DDE domain Aave_2944 PF02796 Helix-turn-helix domain of resolvase Aave_2944 PF00239 Resolvase, N terminal domain Aave_2946 PF00501 AMP-binding enzyme Aave_2946 PF13193 AMP-binding enzyme C-terminal domain Aave_2947 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Aave_2948 PF01641 SelR domain Aave_2949 PF04279 Intracellular septation protein A Aave_2954 PF01176 Translation initiation factor 1A / IF-1 Aave_2955 PF02666 Phosphatidylserine decarboxylase Aave_2957 PF12951 Passenger-associated-transport-repeat Aave_2958 PF00892 EamA-like transporter family Aave_2961 PF01979 Amidohydrolase family Aave_2964 PF17391 Urocanase N-terminal domain Aave_2964 PF01175 Urocanase Rossmann-like domain Aave_2964 PF17392 Urocanase C-terminal domain Aave_2965 PF00221 Aromatic amino acid lyase Aave_2966 PF00392 Bacterial regulatory proteins, gntR family Aave_2966 PF07702 UTRA domain Aave_2967 PF00005 ABC transporter Aave_2968 PF00528 Binding-protein-dependent transport system inner membrane component Aave_2970 PF08678 Rsbr N terminal Aave_2970 PF01740 STAS domain Aave_2971 PF01740 STAS domain Aave_2972 PF13581 Histidine kinase-like ATPase domain Aave_2974 PF00512 His Kinase A (phospho-acceptor) domain Aave_2974 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2975 PF00512 His Kinase A (phospho-acceptor) domain Aave_2976 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2976 PF00072 Response regulator receiver domain Aave_2976 PF13426 PAS domain Aave_2978 PF08446 PAS fold Aave_2978 PF00360 Phytochrome region Aave_2978 PF00512 His Kinase A (phospho-acceptor) domain Aave_2978 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2978 PF01590 GAF domain Aave_2980 PF01590 GAF domain Aave_2980 PF08446 PAS fold Aave_2980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_2980 PF00360 Phytochrome region Aave_2980 PF00512 His Kinase A (phospho-acceptor) domain Aave_2982 PF00483 Nucleotidyl transferase Aave_2983 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Aave_2983 PF00128 Alpha amylase, catalytic domain Aave_2984 PF11941 Domain of unknown function (DUF3459) Aave_2984 PF00128 Alpha amylase, catalytic domain Aave_2985 PF00128 Alpha amylase, catalytic domain Aave_2986 PF00534 Glycosyl transferases group 1 Aave_2986 PF08323 Starch synthase catalytic domain Aave_2988 PF08206 Ribonuclease B OB domain Aave_2988 PF00773 RNB domain Aave_2988 PF08461 Ribonuclease R winged-helix domain Aave_2988 PF17876 Cold shock domain Aave_2988 PF00575 S1 RNA binding domain Aave_2991 PF01464 Transglycosylase SLT domain Aave_2991 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Aave_2992 PF00464 Serine hydroxymethyltransferase Aave_2993 PF03477 ATP cone domain Aave_2995 PF01264 Chorismate synthase Aave_2996 PF00005 ABC transporter Aave_2996 PF00571 CBS domain Aave_2997 PF01053 Cys/Met metabolism PLP-dependent enzyme Aave_2999 PF13419 Haloacid dehalogenase-like hydrolase Aave_3000 PF00762 Ferrochelatase Aave_3001 PF16736 Single Cache-like Aave_3001 PF00989 PAS fold Aave_3001 PF00512 His Kinase A (phospho-acceptor) domain Aave_3001 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3002 PF00072 Response regulator receiver domain Aave_3002 PF00486 Transcriptional regulatory protein, C terminal Aave_3005 PF10605 3HB-oligomer hydrolase (3HBOH) Aave_3007 PF07715 TonB-dependent Receptor Plug Domain Aave_3007 PF00593 TonB dependent receptor Aave_3009 PF01970 Tripartite tricarboxylate transporter TctA family Aave_3011 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3012 PF00486 Transcriptional regulatory protein, C terminal Aave_3012 PF00072 Response regulator receiver domain Aave_3013 PF08521 Two-component sensor kinase N-terminal Aave_3013 PF00512 His Kinase A (phospho-acceptor) domain Aave_3013 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3014 PF02417 Chromate transporter Aave_3016 PF00248 Aldo/keto reductase family Aave_3017 PF02146 Sir2 family Aave_3018 PF08032 RNA 2'-O ribose methyltransferase substrate binding Aave_3018 PF00588 SpoU rRNA Methylase family Aave_3019 PF00005 ABC transporter Aave_3020 PF13472 GDSL-like Lipase/Acylhydrolase family Aave_3021 PF01053 Cys/Met metabolism PLP-dependent enzyme Aave_3023 PF01740 STAS domain Aave_3023 PF00916 Sulfate permease family Aave_3024 PF00990 Diguanylate cyclase, GGDEF domain Aave_3024 PF00072 Response regulator receiver domain Aave_3025 PF10609 NUBPL iron-transfer P-loop NTPase Aave_3027 PF05726 Pirin C-terminal cupin domain Aave_3027 PF02678 Pirin Aave_3028 PF03358 NADPH-dependent FMN reductase Aave_3029 PF02678 Pirin Aave_3029 PF17954 Quercetinase C-terminal cupin domain Aave_3030 PF03466 LysR substrate binding domain Aave_3030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3031 PF01593 Flavin containing amine oxidoreductase Aave_3032 PF00749 tRNA synthetases class I (E and Q), catalytic domain Aave_3033 PF02390 Putative methyltransferase Aave_3034 PF17158 Membrane-associated sensor, integral membrane domain Aave_3034 PF00990 Diguanylate cyclase, GGDEF domain Aave_3035 PF01411 tRNA synthetases class II (A) Aave_3035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Aave_3035 PF02272 DHHA1 domain Aave_3039 PF03466 LysR substrate binding domain Aave_3039 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3040 PF03459 TOBE domain Aave_3041 PF00005 ABC transporter Aave_3042 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3044 PF00296 Luciferase-like monooxygenase Aave_3045 PF09084 NMT1/THI5 like Aave_3047 PF04362 Bacterial Fe(2+) trafficking Aave_3048 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Aave_3048 PF01266 FAD dependent oxidoreductase Aave_3052 PF01925 Sulfite exporter TauE/SafE Aave_3053 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Aave_3053 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Aave_3055 PF01507 Phosphoadenosine phosphosulfate reductase family Aave_3056 PF00009 Elongation factor Tu GTP binding domain Aave_3057 PF00037 4Fe-4S binding domain Aave_3057 PF11953 Domain of unknown function (DUF3470) Aave_3058 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_3066 PF00069 Protein kinase domain Aave_3067 PF08543 Phosphomethylpyrimidine kinase Aave_3068 PF01266 FAD dependent oxidoreductase Aave_3070 PF05690 Thiazole biosynthesis protein ThiG Aave_3071 PF02581 Thiamine monophosphate synthase Aave_3073 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain Aave_3073 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aave_3073 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aave_3074 PF00378 Enoyl-CoA hydratase/isomerase Aave_3075 PF00027 Cyclic nucleotide-binding domain Aave_3075 PF13545 Crp-like helix-turn-helix domain Aave_3077 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_3077 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_3077 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_3080 PF00211 Adenylate and Guanylate cyclase catalytic domain Aave_3080 PF16701 Adenylate cyclase regulatory domain Aave_3081 PF02016 LD-carboxypeptidase N-terminal domain Aave_3081 PF17676 LD-carboxypeptidase C-terminal domain Aave_3082 PF14437 MafB19-like deaminase Aave_3084 PF13458 Periplasmic binding protein Aave_3086 PF12392 Collagenase Aave_3086 PF01136 Peptidase family U32 Aave_3088 PF07676 WD40-like Beta Propeller Repeat Aave_3088 PF00326 Prolyl oligopeptidase family Aave_3089 PF01053 Cys/Met metabolism PLP-dependent enzyme Aave_3090 PF03781 Sulfatase-modifying factor enzyme 1 Aave_3090 PF12867 DinB superfamily Aave_3091 PF10017 Histidine-specific methyltransferase, SAM-dependent Aave_3093 PF00672 HAMP domain Aave_3093 PF00512 His Kinase A (phospho-acceptor) domain Aave_3093 PF01627 Hpt domain Aave_3093 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3093 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Aave_3093 PF00072 Response regulator receiver domain Aave_3094 PF03922 OmpW family Aave_3095 PF05661 Protein of unknown function (DUF808) Aave_3096 PF00990 Diguanylate cyclase, GGDEF domain Aave_3096 PF00563 EAL domain Aave_3096 PF03707 Bacterial signalling protein N terminal repeat Aave_3099 PF02769 AIR synthase related protein, C-terminal domain Aave_3099 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Aave_3099 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Aave_3100 PF00557 Metallopeptidase family M24 Aave_3101 PF08335 GlnD PII-uridylyltransferase Aave_3101 PF01966 HD domain Aave_3101 PF01909 Nucleotidyltransferase domain Aave_3102 PF01327 Polypeptide deformylase Aave_3103 PF04304 Protein of unknown function (DUF454) Aave_3104 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Aave_3105 PF04377 Arginine-tRNA-protein transferase, C terminus Aave_3105 PF04376 Arginine-tRNA-protein transferase, N terminus Aave_3106 PF09339 IclR helix-turn-helix domain Aave_3106 PF01614 Bacterial transcriptional regulator Aave_3107 PF00768 D-alanyl-D-alanine carboxypeptidase Aave_3108 PF08502 LeuA allosteric (dimerisation) domain Aave_3108 PF00682 HMGL-like Aave_3109 PF01066 CDP-alcohol phosphatidyltransferase Aave_3110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Aave_3110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Aave_3111 PF10369 Small subunit of acetolactate synthase Aave_3112 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Aave_3112 PF00205 Thiamine pyrophosphate enzyme, central domain Aave_3112 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Aave_3113 PF04542 Sigma-70 region 2 Aave_3113 PF08281 Sigma-70, region 4 Aave_3117 PF01219 Prokaryotic diacylglycerol kinase Aave_3118 PF03641 Possible lysine decarboxylase Aave_3119 PF00543 Nitrogen regulatory protein P-II Aave_3120 PF00795 Carbon-nitrogen hydrolase Aave_3120 PF02540 NAD synthase Aave_3122 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3122 PF03466 LysR substrate binding domain Aave_3124 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3125 PF01584 CheW-like domain Aave_3126 PF01144 Coenzyme A transferase Aave_3127 PF01144 Coenzyme A transferase Aave_3130 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_3132 PF00141 Peroxidase Aave_3137 PF06628 Catalase-related immune-responsive Aave_3137 PF00199 Catalase Aave_3140 PF08212 Lipocalin-like domain Aave_3142 PF02653 Branched-chain amino acid transport system / permease component Aave_3143 PF00005 ABC transporter Aave_3144 PF01037 Lrp/AsnC ligand binding domain Aave_3145 PF01571 Aminomethyltransferase folate-binding domain Aave_3145 PF08669 Glycine cleavage T-protein C-terminal barrel domain Aave_3146 PF01597 Glycine cleavage H-protein Aave_3147 PF02347 Glycine cleavage system P-protein Aave_3148 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Aave_3148 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Aave_3149 PF13188 PAS domain Aave_3149 PF00512 His Kinase A (phospho-acceptor) domain Aave_3149 PF08448 PAS fold Aave_3149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3149 PF00072 Response regulator receiver domain Aave_3150 PF00849 RNA pseudouridylate synthase Aave_3151 PF00106 short chain dehydrogenase Aave_3152 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3154 PF00582 Universal stress protein family Aave_3156 PF07238 PilZ domain Aave_3157 PF00501 AMP-binding enzyme Aave_3157 PF13193 AMP-binding enzyme C-terminal domain Aave_3158 PF01842 ACT domain Aave_3158 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aave_3158 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Aave_3159 PF13458 Periplasmic binding protein Aave_3162 PF00883 Cytosol aminopeptidase family, catalytic domain Aave_3162 PF02789 Cytosol aminopeptidase family, N-terminal domain Aave_3166 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3166 PF03466 LysR substrate binding domain Aave_3167 PF00155 Aminotransferase class I and II Aave_3170 PF00005 ABC transporter Aave_3171 PF12399 Branched-chain amino acid ATP-binding cassette transporter Aave_3171 PF00005 ABC transporter Aave_3173 PF02653 Branched-chain amino acid transport system / permease component Aave_3174 PF13458 Periplasmic binding protein Aave_3175 PF00501 AMP-binding enzyme Aave_3175 PF13193 AMP-binding enzyme C-terminal domain Aave_3176 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_3176 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_3176 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_3177 PF00378 Enoyl-CoA hydratase/isomerase Aave_3179 PF00106 short chain dehydrogenase Aave_3180 PF01494 FAD binding domain Aave_3182 PF12697 Alpha/beta hydrolase family Aave_3183 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3183 PF07689 KaiB domain Aave_3183 PF00512 His Kinase A (phospho-acceptor) domain Aave_3185 PF11398 Protein of unknown function (DUF2813) Aave_3186 PF13361 UvrD-like helicase C-terminal domain Aave_3186 PF00580 UvrD/REP helicase N-terminal domain Aave_3188 PF01527 Transposase Aave_3189 PF13276 HTH-like domain Aave_3189 PF00665 Integrase core domain Aave_3189 PF13333 Integrase core domain Aave_3196 PF00575 S1 RNA binding domain Aave_3196 PF10150 Ribonuclease E/G family Aave_3197 PF02545 Maf-like protein Aave_3199 PF02590 Predicted SPOUT methyltransferase Aave_3201 PF01218 Coproporphyrinogen III oxidase Aave_3202 PF02844 Phosphoribosylglycinamide synthetase, N domain Aave_3202 PF02843 Phosphoribosylglycinamide synthetase, C domain Aave_3202 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Aave_3203 PF01709 Transcriptional regulator Aave_3204 PF05872 Bacterial protein of unknown function (DUF853) Aave_3205 PF00753 Metallo-beta-lactamase superfamily Aave_3209 PF02913 FAD linked oxidases, C-terminal domain Aave_3209 PF01565 FAD binding domain Aave_3210 PF00206 Lyase Aave_3210 PF10397 Adenylosuccinate lyase C-terminus Aave_3211 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3212 PF00581 Rhodanese-like domain Aave_3213 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3214 PF00384 Molybdopterin oxidoreductase Aave_3214 PF01568 Molydopterin dinucleotide binding domain Aave_3215 PF00043 Glutathione S-transferase, C-terminal domain Aave_3215 PF02798 Glutathione S-transferase, N-terminal domain Aave_3216 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aave_3216 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aave_3216 PF00378 Enoyl-CoA hydratase/isomerase Aave_3217 PF00291 Pyridoxal-phosphate dependent enzyme Aave_3219 PF13302 Acetyltransferase (GNAT) domain Aave_3221 PF07969 Amidohydrolase family Aave_3228 PF01556 DnaJ C terminal domain Aave_3228 PF00226 DnaJ domain Aave_3228 PF00684 DnaJ central domain Aave_3230 PF00171 Aldehyde dehydrogenase family Aave_3231 PF08240 Alcohol dehydrogenase GroES-like domain Aave_3231 PF00107 Zinc-binding dehydrogenase Aave_3234 PF00158 Sigma-54 interaction domain Aave_3234 PF02954 Bacterial regulatory protein, Fis family Aave_3234 PF01590 GAF domain Aave_3235 PF02146 Sir2 family Aave_3236 PF00929 Exonuclease Aave_3236 PF08411 Exonuclease C-terminal Aave_3237 PF13406 Transglycosylase SLT domain Aave_3238 PF10431 C-terminal, D2-small domain, of ClpB protein Aave_3238 PF17871 AAA lid domain Aave_3238 PF00004 ATPase family associated with various cellular activities (AAA) Aave_3238 PF02861 Clp amino terminal domain, pathogenicity island component Aave_3238 PF07724 AAA domain (Cdc48 subfamily) Aave_3239 PF02617 ATP-dependent Clp protease adaptor protein ClpS Aave_3240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Aave_3240 PF02811 PHP domain Aave_3240 PF01336 OB-fold nucleic acid binding domain Aave_3240 PF07733 Bacterial DNA polymerase III alpha NTPase domain Aave_3240 PF14579 Helix-hairpin-helix motif Aave_3241 PF13525 Outer membrane lipoprotein Aave_3242 PF04851 Type III restriction enzyme, res subunit Aave_3242 PF13307 Helicase C-terminal domain Aave_3245 PF03969 AFG1-like ATPase Aave_3246 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_3246 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Aave_3247 PF02817 e3 binding domain Aave_3247 PF00364 Biotin-requiring enzyme Aave_3247 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Aave_3248 PF02779 Transketolase, pyrimidine binding domain Aave_3248 PF16870 2-oxoglutarate dehydrogenase C-terminal Aave_3248 PF00676 Dehydrogenase E1 component Aave_3248 PF16078 2-oxoglutarate dehydrogenase N-terminus Aave_3249 PF01594 AI-2E family transporter Aave_3250 PF00563 EAL domain Aave_3250 PF00990 Diguanylate cyclase, GGDEF domain Aave_3250 PF05231 MASE1 Aave_3250 PF08447 PAS fold Aave_3250 PF08448 PAS fold Aave_3250 PF13426 PAS domain Aave_3251 PF00005 ABC transporter Aave_3251 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aave_3252 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3252 PF12911 N-terminal TM domain of oligopeptide transport permease C Aave_3253 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3254 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aave_3256 PF02469 Fasciclin domain Aave_3257 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Aave_3257 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Aave_3257 PF01276 Orn/Lys/Arg decarboxylase, major domain Aave_3259 PF01145 SPFH domain / Band 7 family Aave_3271 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3272 PF01970 Tripartite tricarboxylate transporter TctA family Aave_3274 PF00486 Transcriptional regulatory protein, C terminal Aave_3274 PF00072 Response regulator receiver domain Aave_3275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3275 PF00672 HAMP domain Aave_3275 PF00512 His Kinase A (phospho-acceptor) domain Aave_3277 PF13419 Haloacid dehalogenase-like hydrolase Aave_3279 PF00691 OmpA family Aave_3280 PF00521 DNA gyrase/topoisomerase IV, subunit A Aave_3280 PF03989 DNA gyrase C-terminal domain, beta-propeller Aave_3281 PF00266 Aminotransferase class-V Aave_3282 PF01817 Chorismate mutase type II Aave_3282 PF00800 Prephenate dehydratase Aave_3282 PF01842 ACT domain Aave_3283 PF02153 Prephenate dehydrogenase Aave_3284 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Aave_3285 PF00575 S1 RNA binding domain Aave_3286 PF00216 Bacterial DNA-binding protein Aave_3288 PF18073 Rubredoxin metal binding domain Aave_3289 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Aave_3289 PF00361 Proton-conducting membrane transporter Aave_3289 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Aave_3289 PF13244 Domain of unknown function (DUF4040) Aave_3290 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Aave_3291 PF00361 Proton-conducting membrane transporter Aave_3293 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Aave_3295 PF01968 Hydantoinase/oxoprolinase Aave_3295 PF05378 Hydantoinase/oxoprolinase N-terminal region Aave_3299 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Aave_3300 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Aave_3304 PF02646 RmuC family Aave_3305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aave_3305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Aave_3306 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Aave_3306 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Aave_3309 PF09361 Phasin protein Aave_3312 PF01618 MotA/TolQ/ExbB proton channel family Aave_3313 PF02472 Biopolymer transport protein ExbD/TolR Aave_3315 PF03928 Haem-degrading Aave_3316 PF01027 Inhibitor of apoptosis-promoting Bax1 Aave_3318 PF05958 tRNA (Uracil-5-)-methyltransferase Aave_3320 PF01037 Lrp/AsnC ligand binding domain Aave_3321 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Aave_3321 PF14850 DNA-binding domain of Proline dehydrogenase Aave_3321 PF01619 Proline dehydrogenase Aave_3321 PF00171 Aldehyde dehydrogenase family Aave_3323 PF01032 FecCD transport family Aave_3325 PF00005 ABC transporter Aave_3326 PF07715 TonB-dependent Receptor Plug Domain Aave_3326 PF00593 TonB dependent receptor Aave_3328 PF02798 Glutathione S-transferase, N-terminal domain Aave_3328 PF00043 Glutathione S-transferase, C-terminal domain Aave_3329 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3330 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3332 PF00293 NUDIX domain Aave_3333 PF00313 'Cold-shock' DNA-binding domain Aave_3336 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_3337 PF13649 Methyltransferase domain Aave_3345 PF03527 RHS protein Aave_3345 PF05593 RHS Repeat Aave_3347 PF04717 Type VI secretion system, phage-baseplate injector Aave_3351 PF03466 LysR substrate binding domain Aave_3351 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3353 PF13333 Integrase core domain Aave_3353 PF00665 Integrase core domain Aave_3353 PF13276 HTH-like domain Aave_3354 PF01527 Transposase Aave_3357 PF02463 RecF/RecN/SMC N terminal domain Aave_3358 PF01420 Type I restriction modification DNA specificity domain Aave_3359 PF12161 HsdM N-terminal domain Aave_3359 PF02384 N-6 DNA Methylase Aave_3366 PF13356 Arm DNA-binding domain Aave_3366 PF00589 Phage integrase family Aave_3367 PF02540 NAD synthase Aave_3367 PF00958 GMP synthase C terminal domain Aave_3367 PF00117 Glutamine amidotransferase class-I Aave_3370 PF00478 IMP dehydrogenase / GMP reductase domain Aave_3370 PF00571 CBS domain Aave_3372 PF03658 RnfH family Ubiquitin Aave_3373 PF03364 Polyketide cyclase / dehydrase and lipid transport Aave_3374 PF01668 SmpB protein Aave_3376 PF04542 Sigma-70 region 2 Aave_3376 PF08281 Sigma-70, region 4 Aave_3378 PF00378 Enoyl-CoA hydratase/isomerase Aave_3379 PF03471 Transporter associated domain Aave_3379 PF03741 Integral membrane protein TerC family Aave_3381 PF16198 tRNA pseudouridylate synthase B C-terminal domain Aave_3381 PF01509 TruB family pseudouridylate synthase (N terminal domain) Aave_3382 PF02033 Ribosome-binding factor A Aave_3383 PF08364 Bacterial translation initiation factor IF-2 associated region Aave_3383 PF00009 Elongation factor Tu GTP binding domain Aave_3383 PF04760 Translation initiation factor IF-2, N-terminal region Aave_3383 PF11987 Translation-initiation factor 2 Aave_3384 PF13184 NusA-like KH domain Aave_3384 PF00575 S1 RNA binding domain Aave_3384 PF08529 NusA N-terminal domain Aave_3385 PF02576 RimP N-terminal domain Aave_3387 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Aave_3387 PF00034 Cytochrome c Aave_3387 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Aave_3390 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3393 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3393 PF03466 LysR substrate binding domain Aave_3400 PF02423 Ornithine cyclodeaminase/mu-crystallin family Aave_3401 PF13458 Periplasmic binding protein Aave_3403 PF00899 ThiF family Aave_3405 PF00691 OmpA family Aave_3406 PF04052 TolB amino-terminal domain Aave_3406 PF07676 WD40-like Beta Propeller Repeat Aave_3407 PF00664 ABC transporter transmembrane region Aave_3407 PF00005 ABC transporter Aave_3409 PF01026 TatD related DNase Aave_3412 PF02223 Thymidylate kinase Aave_3413 PF02618 YceG-like family Aave_3414 PF01571 Aminomethyltransferase folate-binding domain Aave_3416 PF07859 alpha/beta hydrolase fold Aave_3417 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aave_3418 PF00465 Iron-containing alcohol dehydrogenase Aave_3421 PF17674 HHH domain Aave_3421 PF09371 Tex-like protein N-terminal domain Aave_3421 PF16921 Tex protein YqgF-like domain Aave_3421 PF00575 S1 RNA binding domain Aave_3425 PF03548 Outer membrane lipoprotein carrier protein LolA Aave_3426 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Aave_3426 PF17854 FtsK alpha domain Aave_3426 PF09397 Ftsk gamma domain Aave_3426 PF01580 FtsK/SpoIIIE family Aave_3427 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aave_3428 PF00830 Ribosomal L28 family Aave_3429 PF00471 Ribosomal protein L33 Aave_3430 PF00392 Bacterial regulatory proteins, gntR family Aave_3430 PF00155 Aminotransferase class I and II Aave_3433 PF01189 16S rRNA methyltransferase RsmB/F Aave_3433 PF01029 NusB family Aave_3434 PF00544 Pectate lyase Aave_3437 PF00551 Formyl transferase Aave_3438 PF04337 Protein of unknown function, DUF480 Aave_3439 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_3439 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_3439 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_3442 PF00704 Glycosyl hydrolases family 18 Aave_3442 PF00041 Fibronectin type III domain Aave_3442 PF00553 Cellulose binding domain Aave_3444 PF02203 Tar ligand binding domain homologue Aave_3444 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_3444 PF00672 HAMP domain Aave_3445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Aave_3447 PF03480 Bacterial extracellular solute-binding protein, family 7 Aave_3449 PF06574 FAD synthetase Aave_3449 PF01687 Riboflavin kinase Aave_3450 PF00133 tRNA synthetases class I (I, L, M and V) Aave_3450 PF08264 Anticodon-binding domain of tRNA Aave_3450 PF06827 Zinc finger found in FPG and IleRS Aave_3451 PF01252 Signal peptidase (SPase) II Aave_3453 PF00356 Bacterial regulatory proteins, lacI family Aave_3455 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3456 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3457 PF00005 ABC transporter Aave_3457 PF08402 TOBE domain Aave_3458 PF00149 Calcineurin-like phosphoesterase Aave_3460 PF05598 Transposase domain (DUF772) Aave_3460 PF01609 Transposase DDE domain Aave_3461 PF02690 Na+/Pi-cotransporter Aave_3463 PF03466 LysR substrate binding domain Aave_3463 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3465 PF13593 SBF-like CPA transporter family (DUF4137) Aave_3468 PF00107 Zinc-binding dehydrogenase Aave_3468 PF08240 Alcohol dehydrogenase GroES-like domain Aave_3469 PF00892 EamA-like transporter family Aave_3478 PF14220 Domain of unknown function (DUF4329) Aave_3478 PF03527 RHS protein Aave_3478 PF05593 RHS Repeat Aave_3481 PF05593 RHS Repeat Aave_3481 PF03527 RHS protein Aave_3481 PF14220 Domain of unknown function (DUF4329) Aave_3486 PF04717 Type VI secretion system, phage-baseplate injector Aave_3487 PF00563 EAL domain Aave_3487 PF00990 Diguanylate cyclase, GGDEF domain Aave_3487 PF03707 Bacterial signalling protein N terminal repeat Aave_3490 PF00781 Diacylglycerol kinase catalytic domain Aave_3492 PF07690 Major Facilitator Superfamily Aave_3496 PF00005 ABC transporter Aave_3497 PF00005 ABC transporter Aave_3497 PF12399 Branched-chain amino acid ATP-binding cassette transporter Aave_3499 PF02653 Branched-chain amino acid transport system / permease component Aave_3501 PF00375 Sodium:dicarboxylate symporter family Aave_3507 PF01292 Prokaryotic cytochrome b561 Aave_3510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Aave_3510 PF02785 Biotin carboxylase C-terminal domain Aave_3510 PF00364 Biotin-requiring enzyme Aave_3510 PF00289 Biotin carboxylase, N-terminal domain Aave_3511 PF02682 Carboxyltransferase domain, subdomain C and D Aave_3512 PF07286 Protein of unknown function (DUF1445) Aave_3513 PF03746 LamB/YcsF family Aave_3517 PF01494 FAD binding domain Aave_3518 PF00672 HAMP domain Aave_3518 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3518 PF00512 His Kinase A (phospho-acceptor) domain Aave_3519 PF01070 FMN-dependent dehydrogenase Aave_3523 PF08447 PAS fold Aave_3523 PF00990 Diguanylate cyclase, GGDEF domain Aave_3523 PF00563 EAL domain Aave_3523 PF08448 PAS fold Aave_3524 PF00072 Response regulator receiver domain Aave_3525 PF00512 His Kinase A (phospho-acceptor) domain Aave_3525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3525 PF01627 Hpt domain Aave_3525 PF00072 Response regulator receiver domain Aave_3526 PF00547 Urease, gamma subunit Aave_3528 PF00699 Urease beta subunit Aave_3529 PF00449 Urease alpha-subunit, N-terminal domain Aave_3529 PF01979 Amidohydrolase family Aave_3531 PF02814 UreE urease accessory protein, N-terminal domain Aave_3531 PF05194 UreE urease accessory protein, C-terminal domain Aave_3532 PF01730 UreF Aave_3533 PF02492 CobW/HypB/UreG, nucleotide-binding domain Aave_3536 PF00004 ATPase family associated with various cellular activities (AAA) Aave_3540 PF02525 Flavodoxin-like fold Aave_3541 PF00512 His Kinase A (phospho-acceptor) domain Aave_3541 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3545 PF00563 EAL domain Aave_3545 PF00990 Diguanylate cyclase, GGDEF domain Aave_3545 PF13426 PAS domain Aave_3546 PF01739 CheR methyltransferase, SAM binding domain Aave_3546 PF03705 CheR methyltransferase, all-alpha domain Aave_3548 PF00072 Response regulator receiver domain Aave_3548 PF01339 CheB methylesterase Aave_3549 PF14245 Type IV pilin PilA Aave_3549 PF07963 Prokaryotic N-terminal methylation motif Aave_3550 PF07963 Prokaryotic N-terminal methylation motif Aave_3550 PF14245 Type IV pilin PilA Aave_3551 PF05567 Neisseria PilC beta-propeller domain Aave_3555 PF01872 RibD C-terminal domain Aave_3555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Aave_3557 PF00115 Cytochrome C and Quinol oxidase polypeptide I Aave_3564 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3564 PF00072 Response regulator receiver domain Aave_3564 PF13426 PAS domain Aave_3570 PF04545 Sigma-70, region 4 Aave_3570 PF04542 Sigma-70 region 2 Aave_3574 PF00106 short chain dehydrogenase Aave_3577 PF06969 HemN C-terminal domain Aave_3577 PF04055 Radical SAM superfamily Aave_3578 PF01725 Ham1 family Aave_3579 PF03725 3' exoribonuclease family, domain 2 Aave_3579 PF01138 3' exoribonuclease family, domain 1 Aave_3581 PF00069 Protein kinase domain Aave_3581 PF03793 PASTA domain Aave_3582 PF03755 YicC-like family, N-terminal region Aave_3582 PF08340 Domain of unknown function (DUF1732) Aave_3583 PF00625 Guanylate kinase Aave_3584 PF01192 RNA polymerase Rpb6 Aave_3585 PF04607 Region found in RelA / SpoT proteins Aave_3585 PF02824 TGS domain Aave_3585 PF13291 ACT domain Aave_3586 PF03449 Transcription elongation factor, N-terminal Aave_3586 PF01272 Transcription elongation factor, GreA/GreB, C-term Aave_3590 PF00331 Glycosyl hydrolase family 10 Aave_3590 PF00553 Cellulose binding domain Aave_3590 PF03422 Carbohydrate binding module (family 6) Aave_3591 PF00072 Response regulator receiver domain Aave_3591 PF00196 Bacterial regulatory proteins, luxR family Aave_3593 PF01628 HrcA protein C terminal domain Aave_3593 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Aave_3594 PF00239 Resolvase, N terminal domain Aave_3601 PF01513 ATP-NAD kinase Aave_3602 PF02463 RecF/RecN/SMC N terminal domain Aave_3603 PF03668 P-loop ATPase protein family Aave_3604 PF00730 HhH-GPD superfamily base excision DNA repair protein Aave_3604 PF14815 NUDIX domain Aave_3604 PF00633 Helix-hairpin-helix motif Aave_3604 PF10576 Iron-sulfur binding domain of endonuclease III Aave_3606 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Aave_3606 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Aave_3606 PF06827 Zinc finger found in FPG and IleRS Aave_3609 PF08544 GHMP kinases C terminal Aave_3609 PF00288 GHMP kinases N terminal domain Aave_3610 PF14572 Phosphoribosyl synthetase-associated domain Aave_3610 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Aave_3611 PF14693 Ribosomal protein TL5, C-terminal domain Aave_3611 PF01386 Ribosomal L25p family Aave_3612 PF01195 Peptidyl-tRNA hydrolase Aave_3613 PF00037 4Fe-4S binding domain Aave_3614 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3615 PF12911 N-terminal TM domain of oligopeptide transport permease C Aave_3615 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3616 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aave_3616 PF00005 ABC transporter Aave_3617 PF00005 ABC transporter Aave_3617 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aave_3619 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aave_3623 PF13378 Enolase C-terminal domain-like Aave_3623 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Aave_3624 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3625 PF00356 Bacterial regulatory proteins, lacI family Aave_3625 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Aave_3631 PF01227 GTP cyclohydrolase I Aave_3632 PF13091 PLD-like domain Aave_3635 PF00293 NUDIX domain Aave_3637 PF01336 OB-fold nucleic acid binding domain Aave_3637 PF00152 tRNA synthetases class II (D, K and N) Aave_3637 PF02938 GAD domain Aave_3641 PF03109 ABC1 family Aave_3644 PF01209 ubiE/COQ5 methyltransferase family Aave_3646 PF00072 Response regulator receiver domain Aave_3646 PF00990 Diguanylate cyclase, GGDEF domain Aave_3649 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aave_3649 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Aave_3650 PF13416 Bacterial extracellular solute-binding protein Aave_3651 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3652 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3653 PF00005 ABC transporter Aave_3653 PF17912 MalK OB fold domain Aave_3655 PF03009 Glycerophosphoryl diester phosphodiesterase family Aave_3656 PF12794 Mechanosensitive ion channel inner membrane domain 1 Aave_3656 PF00924 Mechanosensitive ion channel Aave_3656 PF12795 Mechanosensitive ion channel porin domain Aave_3657 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3663 PF01488 Shikimate / quinate 5-dehydrogenase Aave_3663 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Aave_3663 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Aave_3664 PF00472 RF-1 domain Aave_3664 PF03462 PCRF domain Aave_3665 PF05175 Methyltransferase small domain Aave_3665 PF17827 PrmC N-terminal domain Aave_3667 PF02190 ATP-dependent protease La (LON) substrate-binding domain Aave_3667 PF05362 Lon protease (S16) C-terminal proteolytic domain Aave_3667 PF00004 ATPase family associated with various cellular activities (AAA) Aave_3668 PF01595 Cyclin M transmembrane N-terminal domain Aave_3668 PF00571 CBS domain Aave_3668 PF03471 Transporter associated domain Aave_3669 PF01464 Transglycosylase SLT domain Aave_3669 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Aave_3670 PF03129 Anticodon binding domain Aave_3670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aave_3670 PF04073 Aminoacyl-tRNA editing domain Aave_3671 PF00293 NUDIX domain Aave_3672 PF00696 Amino acid kinase family Aave_3672 PF01472 PUA domain Aave_3673 PF01926 50S ribosome-binding GTPase Aave_3673 PF01018 GTP1/OBG Aave_3674 PF01016 Ribosomal L27 protein Aave_3675 PF00829 Ribosomal prokaryotic L21 protein Aave_3676 PF00348 Polyprenyl synthetase Aave_3677 PF01546 Peptidase family M20/M25/M40 Aave_3677 PF07687 Peptidase dimerisation domain Aave_3678 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3679 PF03466 LysR substrate binding domain Aave_3679 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3680 PF00437 Type II/IV secretion system protein Aave_3680 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Aave_3681 PF00482 Type II secretion system (T2SS), protein F Aave_3682 PF01478 Type IV leader peptidase family Aave_3682 PF06750 Bacterial Peptidase A24 N-terminal domain Aave_3683 PF01121 Dephospho-CoA kinase Aave_3684 PF07072 Cell division protein Aave_3685 PF03884 DNA gyrase inhibitor YacG Aave_3686 PF00293 NUDIX domain Aave_3688 PF01960 ArgJ family Aave_3689 PF02810 SEC-C motif Aave_3689 PF07517 SecA DEAD-like domain Aave_3689 PF01043 SecA preprotein cross-linking domain Aave_3689 PF07516 SecA Wing and Scaffold domain Aave_3690 PF01551 Peptidase family M23 Aave_3690 PF01476 LysM domain Aave_3690 PF08525 Opacity-associated protein A N-terminal motif Aave_3692 PF04386 Stringent starvation protein B Aave_3693 PF02798 Glutathione S-transferase, N-terminal domain Aave_3693 PF00043 Glutathione S-transferase, C-terminal domain Aave_3694 PF02167 Cytochrome C1 family Aave_3695 PF00033 Cytochrome b/b6/petB Aave_3695 PF00032 Cytochrome b(C-terminal)/b6/petD Aave_3696 PF00355 Rieske [2Fe-2S] domain Aave_3696 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Aave_3697 PF01741 Large-conductance mechanosensitive channel, MscL Aave_3698 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Aave_3699 PF00005 ABC transporter Aave_3700 PF12704 MacB-like periplasmic core domain Aave_3700 PF02687 FtsX-like permease family Aave_3702 PF02272 DHHA1 domain Aave_3702 PF17768 RecJ OB domain Aave_3702 PF01368 DHH family Aave_3705 PF00155 Aminotransferase class I and II Aave_3706 PF07690 Major Facilitator Superfamily Aave_3707 PF02811 PHP domain Aave_3708 PF01300 Telomere recombination Aave_3710 PF02163 Peptidase family M50 Aave_3711 PF00579 tRNA synthetases class I (W and Y) Aave_3712 PF03527 RHS protein Aave_3712 PF15606 Bacterial toxin 34 Aave_3712 PF05593 RHS Repeat Aave_3717 PF00202 Aminotransferase class-III Aave_3723 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Aave_3724 PF00664 ABC transporter transmembrane region Aave_3724 PF00005 ABC transporter Aave_3726 PF00551 Formyl transferase Aave_3728 PF00593 TonB dependent receptor Aave_3728 PF07715 TonB-dependent Receptor Plug Domain Aave_3729 PF13193 AMP-binding enzyme C-terminal domain Aave_3729 PF00975 Thioesterase domain Aave_3729 PF00501 AMP-binding enzyme Aave_3729 PF00550 Phosphopantetheine attachment site Aave_3729 PF00668 Condensation domain Aave_3730 PF13193 AMP-binding enzyme C-terminal domain Aave_3730 PF00501 AMP-binding enzyme Aave_3730 PF00668 Condensation domain Aave_3730 PF00550 Phosphopantetheine attachment site Aave_3731 PF00668 Condensation domain Aave_3731 PF13193 AMP-binding enzyme C-terminal domain Aave_3731 PF00550 Phosphopantetheine attachment site Aave_3731 PF00501 AMP-binding enzyme Aave_3731 PF00975 Thioesterase domain Aave_3732 PF00668 Condensation domain Aave_3732 PF00109 Beta-ketoacyl synthase, N-terminal domain Aave_3732 PF02801 Beta-ketoacyl synthase, C-terminal domain Aave_3732 PF00550 Phosphopantetheine attachment site Aave_3732 PF00698 Acyl transferase domain Aave_3732 PF16197 Ketoacyl-synthetase C-terminal extension Aave_3733 PF00501 AMP-binding enzyme Aave_3733 PF00550 Phosphopantetheine attachment site Aave_3733 PF00668 Condensation domain Aave_3733 PF13193 AMP-binding enzyme C-terminal domain Aave_3735 PF13193 AMP-binding enzyme C-terminal domain Aave_3735 PF00668 Condensation domain Aave_3735 PF00550 Phosphopantetheine attachment site Aave_3735 PF00975 Thioesterase domain Aave_3735 PF00501 AMP-binding enzyme Aave_3736 PF03621 MbtH-like protein Aave_3739 PF00012 Hsp70 protein Aave_3740 PF00012 Hsp70 protein Aave_3746 PF00654 Voltage gated chloride channel Aave_3751 PF05593 RHS Repeat Aave_3751 PF14220 Domain of unknown function (DUF4329) Aave_3751 PF03527 RHS protein Aave_3752 PF04717 Type VI secretion system, phage-baseplate injector Aave_3753 PF05193 Peptidase M16 inactive domain Aave_3753 PF00675 Insulinase (Peptidase family M16) Aave_3754 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3755 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3756 PF00497 Bacterial extracellular solute-binding proteins, family 3 Aave_3758 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aave_3759 PF00920 Dehydratase family Aave_3762 PF00990 Diguanylate cyclase, GGDEF domain Aave_3762 PF00563 EAL domain Aave_3762 PF03707 Bacterial signalling protein N terminal repeat Aave_3767 PF02403 Seryl-tRNA synthetase N-terminal domain Aave_3767 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aave_3768 PF00291 Pyridoxal-phosphate dependent enzyme Aave_3768 PF13291 ACT domain Aave_3770 PF01595 Cyclin M transmembrane N-terminal domain Aave_3770 PF00571 CBS domain Aave_3770 PF03471 Transporter associated domain Aave_3771 PF02401 LytB protein Aave_3772 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Aave_3773 PF04002 RadC-like JAB domain Aave_3777 PF01713 Smr domain Aave_3777 PF00488 MutS domain V Aave_3778 PF00672 HAMP domain Aave_3778 PF00512 His Kinase A (phospho-acceptor) domain Aave_3778 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3779 PF00072 Response regulator receiver domain Aave_3779 PF00486 Transcriptional regulatory protein, C terminal Aave_3782 PF00149 Calcineurin-like phosphoesterase Aave_3782 PF02872 5'-nucleotidase, C-terminal domain Aave_3783 PF04717 Type VI secretion system, phage-baseplate injector Aave_3788 PF05593 RHS Repeat Aave_3788 PF03527 RHS protein Aave_3789 PF13340 Putative transposase of IS4/5 family (DUF4096) Aave_3790 PF01609 Transposase DDE domain Aave_3794 PF03527 RHS protein Aave_3794 PF05593 RHS Repeat Aave_3800 PF00550 Phosphopantetheine attachment site Aave_3802 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Aave_3802 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Aave_3803 PF01554 MatE Aave_3804 PF00501 AMP-binding enzyme Aave_3804 PF13193 AMP-binding enzyme C-terminal domain Aave_3805 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Aave_3805 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Aave_3810 PF03472 Autoinducer binding domain Aave_3810 PF00196 Bacterial regulatory proteins, luxR family Aave_3811 PF00765 Autoinducer synthase Aave_3812 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_3812 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_3812 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_3813 PF00392 Bacterial regulatory proteins, gntR family Aave_3813 PF07729 FCD domain Aave_3815 PF01425 Amidase Aave_3816 PF13458 Periplasmic binding protein Aave_3817 PF00005 ABC transporter Aave_3818 PF00005 ABC transporter Aave_3818 PF12399 Branched-chain amino acid ATP-binding cassette transporter Aave_3819 PF02653 Branched-chain amino acid transport system / permease component Aave_3819 PF11862 Domain of unknown function (DUF3382) Aave_3820 PF02653 Branched-chain amino acid transport system / permease component Aave_3821 PF01425 Amidase Aave_3822 PF00171 Aldehyde dehydrogenase family Aave_3823 PF03466 LysR substrate binding domain Aave_3823 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3826 PF02634 FdhD/NarQ family Aave_3827 PF00384 Molybdopterin oxidoreductase Aave_3828 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_3828 PF00672 HAMP domain Aave_3828 PF02203 Tar ligand binding domain homologue Aave_3829 PF07690 Major Facilitator Superfamily Aave_3830 PF10609 NUBPL iron-transfer P-loop NTPase Aave_3833 PF00205 Thiamine pyrophosphate enzyme, central domain Aave_3833 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Aave_3833 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Aave_3834 PF01588 Putative tRNA binding domain Aave_3834 PF09334 tRNA synthetases class I (M) Aave_3839 PF02616 Segregation and condensation protein ScpA Aave_3840 PF02910 Fumarate reductase flavoprotein C-term Aave_3840 PF00890 FAD binding domain Aave_3841 PF00202 Aminotransferase class-III Aave_3843 PF00155 Aminotransferase class I and II Aave_3845 PF01242 6-pyruvoyl tetrahydropterin synthase Aave_3849 PF04715 Anthranilate synthase component I, N terminal region Aave_3849 PF00425 chorismate binding enzyme Aave_3850 PF02445 Quinolinate synthetase A protein Aave_3851 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Aave_3851 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Aave_3852 PF02548 Ketopantoate hydroxymethyltransferase Aave_3853 PF02569 Pantoate-beta-alanine ligase Aave_3854 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Aave_3854 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Aave_3855 PF02556 Preprotein translocase subunit SecB Aave_3856 PF00462 Glutaredoxin Aave_3857 PF00581 Rhodanese-like domain Aave_3858 PF00300 Histidine phosphatase superfamily (branch 1) Aave_3859 PF03572 Peptidase family S41 Aave_3859 PF13180 PDZ domain Aave_3860 PF00899 ThiF family Aave_3862 PF00072 Response regulator receiver domain Aave_3862 PF00196 Bacterial regulatory proteins, luxR family Aave_3863 PF05231 MASE1 Aave_3863 PF07730 Histidine kinase Aave_3863 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3864 PF07043 Protein of unknown function (DUF1328) Aave_3868 PF15887 Putative zinc-binding metallo-peptidase Aave_3868 PF10005 zinc-ribbon domain Aave_3869 PF01467 Cytidylyltransferase-like Aave_3871 PF05193 Peptidase M16 inactive domain Aave_3872 PF00675 Insulinase (Peptidase family M16) Aave_3872 PF05193 Peptidase M16 inactive domain Aave_3874 PF02881 SRP54-type protein, helical bundle domain Aave_3874 PF00448 SRP54-type protein, GTPase domain Aave_3875 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aave_3877 PF03812 2-keto-3-deoxygluconate permease Aave_3880 PF00672 HAMP domain Aave_3880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_3880 PF02203 Tar ligand binding domain homologue Aave_3881 PF01965 DJ-1/PfpI family Aave_3881 PF12833 Helix-turn-helix domain Aave_3882 PF01965 DJ-1/PfpI family Aave_3883 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3884 PF01554 MatE Aave_3885 PF01914 MarC family integral membrane protein Aave_3889 PF00528 Binding-protein-dependent transport system inner membrane component Aave_3890 PF08402 TOBE domain Aave_3890 PF00005 ABC transporter Aave_3892 PF03466 LysR substrate binding domain Aave_3892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3894 PF00140 Sigma-70 factor, region 1.2 Aave_3894 PF04545 Sigma-70, region 4 Aave_3894 PF04542 Sigma-70 region 2 Aave_3898 PF02630 SCO1/SenC Aave_3899 PF01040 UbiA prenyltransferase family Aave_3900 PF02628 Cytochrome oxidase assembly protein Aave_3903 PF00510 Cytochrome c oxidase subunit III Aave_3905 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Aave_3906 PF00115 Cytochrome C and Quinol oxidase polypeptide I Aave_3907 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Aave_3907 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Aave_3908 PF08241 Methyltransferase domain Aave_3910 PF00588 SpoU rRNA Methylase family Aave_3911 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3911 PF03466 LysR substrate binding domain Aave_3914 PF13614 AAA domain Aave_3915 PF01810 LysE type translocator Aave_3916 PF00999 Sodium/hydrogen exchanger family Aave_3916 PF02254 TrkA-N domain Aave_3917 PF00593 TonB dependent receptor Aave_3917 PF07715 TonB-dependent Receptor Plug Domain Aave_3921 PF01292 Prokaryotic cytochrome b561 Aave_3922 PF12802 MarR family Aave_3923 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_3923 PF00672 HAMP domain Aave_3923 PF02203 Tar ligand binding domain homologue Aave_3924 PF07690 Major Facilitator Superfamily Aave_3925 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Aave_3925 PF00034 Cytochrome c Aave_3925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Aave_3926 PF01799 [2Fe-2S] binding domain Aave_3926 PF00111 2Fe-2S iron-sulfur cluster binding domain Aave_3927 PF01494 FAD binding domain Aave_3928 PF17645 Arylmalonate decarboxylase Aave_3929 PF00561 alpha/beta hydrolase fold Aave_3931 PF00857 Isochorismatase family Aave_3932 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Aave_3932 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Aave_3932 PF00034 Cytochrome c Aave_3936 PF00723 Glycosyl hydrolases family 15 Aave_3937 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3938 PF02426 Muconolactone delta-isomerase Aave_3939 PF02667 Short chain fatty acid transporter Aave_3940 PF00106 short chain dehydrogenase Aave_3943 PF12146 Serine aminopeptidase, S33 Aave_3944 PF00108 Thiolase, N-terminal domain Aave_3944 PF02803 Thiolase, C-terminal domain Aave_3945 PF01144 Coenzyme A transferase Aave_3946 PF01144 Coenzyme A transferase Aave_3947 PF01614 Bacterial transcriptional regulator Aave_3947 PF09339 IclR helix-turn-helix domain Aave_3951 PF00034 Cytochrome c Aave_3952 PF00004 ATPase family associated with various cellular activities (AAA) Aave_3952 PF17862 AAA+ lid domain Aave_3952 PF01434 Peptidase family M41 Aave_3956 PF04357 TamB, inner membrane protein subunit of TAM complex Aave_3962 PF13091 PLD-like domain Aave_3963 PF00512 His Kinase A (phospho-acceptor) domain Aave_3963 PF08521 Two-component sensor kinase N-terminal Aave_3963 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3964 PF00072 Response regulator receiver domain Aave_3964 PF00486 Transcriptional regulatory protein, C terminal Aave_3965 PF13180 PDZ domain Aave_3968 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aave_3973 PF00296 Luciferase-like monooxygenase Aave_3974 PF00482 Type II secretion system (T2SS), protein F Aave_3979 PF00005 ABC transporter Aave_3979 PF00664 ABC transporter transmembrane region Aave_3982 PF05981 CreA protein Aave_3983 PF03466 LysR substrate binding domain Aave_3983 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_3984 PF02515 CoA-transferase family III Aave_3986 PF03401 Tripartite tricarboxylate transporter family receptor Aave_3988 PF13532 2OG-Fe(II) oxygenase superfamily Aave_3991 PF18011 C-terminal domain found in long catalases Aave_3991 PF06628 Catalase-related immune-responsive Aave_3991 PF00199 Catalase Aave_3992 PF00486 Transcriptional regulatory protein, C terminal Aave_3992 PF00072 Response regulator receiver domain Aave_3993 PF00672 HAMP domain Aave_3993 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3993 PF00512 His Kinase A (phospho-acceptor) domain Aave_3994 PF01339 CheB methylesterase Aave_3995 PF03705 CheR methyltransferase, all-alpha domain Aave_3995 PF01739 CheR methyltransferase, SAM binding domain Aave_3996 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_3996 PF00512 His Kinase A (phospho-acceptor) domain Aave_3996 PF00672 HAMP domain Aave_3996 PF01627 Hpt domain Aave_3996 PF00072 Response regulator receiver domain Aave_3996 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Aave_3998 PF08448 PAS fold Aave_3998 PF00990 Diguanylate cyclase, GGDEF domain Aave_4000 PF00593 TonB dependent receptor Aave_4000 PF07715 TonB-dependent Receptor Plug Domain Aave_4002 PF00528 Binding-protein-dependent transport system inner membrane component Aave_4003 PF12911 N-terminal TM domain of oligopeptide transport permease C Aave_4003 PF00528 Binding-protein-dependent transport system inner membrane component Aave_4004 PF00005 ABC transporter Aave_4005 PF00271 Helicase conserved C-terminal domain Aave_4005 PF16124 RecQ zinc-binding Aave_4005 PF09382 RQC domain Aave_4005 PF00270 DEAD/DEAH box helicase Aave_4005 PF00570 HRDC domain Aave_4008 PF14220 Domain of unknown function (DUF4329) Aave_4008 PF03527 RHS protein Aave_4008 PF05593 RHS Repeat Aave_4008 PF14220 Domain of unknown function (DUF4329) Aave_4008 PF03527 RHS protein Aave_4008 PF05593 RHS Repeat Aave_4009 PF04717 Type VI secretion system, phage-baseplate injector Aave_4012 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Aave_4012 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Aave_4013 PF00941 FAD binding domain in molybdopterin dehydrogenase Aave_4013 PF03450 CO dehydrogenase flavoprotein C-terminal domain Aave_4014 PF10518 TAT (twin-arginine translocation) pathway signal sequence Aave_4014 PF01799 [2Fe-2S] binding domain Aave_4014 PF00111 2Fe-2S iron-sulfur cluster binding domain Aave_4017 PF08240 Alcohol dehydrogenase GroES-like domain Aave_4017 PF00107 Zinc-binding dehydrogenase Aave_4017 PF13823 Alcohol dehydrogenase GroES-associated Aave_4019 PF00881 Nitroreductase family Aave_4022 PF00149 Calcineurin-like phosphoesterase Aave_4022 PF02872 5'-nucleotidase, C-terminal domain Aave_4023 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_4023 PF03466 LysR substrate binding domain Aave_4024 PF03601 Conserved hypothetical protein 698 Aave_4029 PF03631 Virulence factor BrkB Aave_4031 PF12146 Serine aminopeptidase, S33 Aave_4033 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) Aave_4034 PF00361 Proton-conducting membrane transporter Aave_4034 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Aave_4035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_4035 PF03466 LysR substrate binding domain Aave_4036 PF01380 SIS domain Aave_4038 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4039 PF12804 MobA-like NTP transferase domain Aave_4039 PF00132 Bacterial transferase hexapeptide (six repeats) Aave_4040 PF13545 Crp-like helix-turn-helix domain Aave_4040 PF00027 Cyclic nucleotide-binding domain Aave_4044 PF03466 LysR substrate binding domain Aave_4044 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_4047 PF03702 Anhydro-N-acetylmuramic acid kinase Aave_4048 PF07690 Major Facilitator Superfamily Aave_4049 PF01521 Iron-sulphur cluster biosynthesis Aave_4052 PF00380 Ribosomal protein S9/S16 Aave_4053 PF00572 Ribosomal protein L13 Aave_4054 PF00069 Protein kinase domain Aave_4054 PF13360 PQQ-like domain Aave_4055 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Aave_4056 PF03330 Lytic transglycolase Aave_4058 PF02219 Methylenetetrahydrofolate reductase Aave_4059 PF01728 FtsJ-like methyltransferase Aave_4059 PF01479 S4 domain Aave_4060 PF05221 S-adenosyl-L-homocysteine hydrolase Aave_4060 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Aave_4061 PF01757 Acyltransferase family Aave_4062 PF00009 Elongation factor Tu GTP binding domain Aave_4062 PF16658 Class II release factor RF3, C-terminal domain Aave_4062 PF03144 Elongation factor Tu domain 2 Aave_4064 PF00893 Small Multidrug Resistance protein Aave_4068 PF03401 Tripartite tricarboxylate transporter family receptor Aave_4070 PF00005 ABC transporter Aave_4071 PF00528 Binding-protein-dependent transport system inner membrane component Aave_4072 PF00528 Binding-protein-dependent transport system inner membrane component Aave_4073 PF00497 Bacterial extracellular solute-binding proteins, family 3 Aave_4074 PF00497 Bacterial extracellular solute-binding proteins, family 3 Aave_4075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_4075 PF03466 LysR substrate binding domain Aave_4076 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Aave_4077 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Aave_4078 PF03480 Bacterial extracellular solute-binding protein, family 7 Aave_4079 PF00664 ABC transporter transmembrane region Aave_4079 PF00005 ABC transporter Aave_4080 PF03061 Thioesterase superfamily Aave_4082 PF03401 Tripartite tricarboxylate transporter family receptor Aave_4083 PF00378 Enoyl-CoA hydratase/isomerase Aave_4085 PF02803 Thiolase, C-terminal domain Aave_4085 PF00108 Thiolase, N-terminal domain Aave_4087 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aave_4087 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aave_4087 PF00378 Enoyl-CoA hydratase/isomerase Aave_4089 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_4089 PF12806 Acetyl-CoA dehydrogenase C-terminal like Aave_4089 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_4089 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_4117 PF01527 Transposase Aave_4118 PF13333 Integrase core domain Aave_4118 PF13276 HTH-like domain Aave_4118 PF00665 Integrase core domain Aave_4136 PF00440 Bacterial regulatory proteins, tetR family Aave_4137 PF00512 His Kinase A (phospho-acceptor) domain Aave_4137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4138 PF00072 Response regulator receiver domain Aave_4138 PF00486 Transcriptional regulatory protein, C terminal Aave_4139 PF00696 Amino acid kinase family Aave_4145 PF00005 ABC transporter Aave_4150 PF00263 Bacterial type II and III secretion system protein Aave_4150 PF03958 Bacterial type II/III secretion system short domain Aave_4156 PF07963 Prokaryotic N-terminal methylation motif Aave_4157 PF12019 Type II transport protein GspH Aave_4158 PF08334 Type II secretion system (T2SS), protein G Aave_4158 PF07963 Prokaryotic N-terminal methylation motif Aave_4159 PF00482 Type II secretion system (T2SS), protein F Aave_4160 PF00437 Type II/IV secretion system protein Aave_4160 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Aave_4163 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Aave_4164 PF00483 Nucleotidyl transferase Aave_4165 PF04321 RmlD substrate binding domain Aave_4166 PF16363 GDP-mannose 4,6 dehydratase Aave_4169 PF03309 Type III pantothenate kinase Aave_4170 PF04972 BON domain Aave_4170 PF01476 LysM domain Aave_4174 PF01553 Acyltransferase Aave_4177 PF05746 DALR anticodon binding domain Aave_4177 PF02092 Glycyl-tRNA synthetase beta subunit Aave_4178 PF02091 Glycyl-tRNA synthetase alpha subunit Aave_4179 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Aave_4180 PF00109 Beta-ketoacyl synthase, N-terminal domain Aave_4180 PF02801 Beta-ketoacyl synthase, C-terminal domain Aave_4181 PF07977 FabA-like domain Aave_4182 PF00710 Asparaginase, N-terminal Aave_4182 PF17763 Glutaminase/Asparaginase C-terminal domain Aave_4183 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_4183 PF03466 LysR substrate binding domain Aave_4184 PF00795 Carbon-nitrogen hydrolase Aave_4185 PF00571 CBS domain Aave_4185 PF03471 Transporter associated domain Aave_4188 PF01037 Lrp/AsnC ligand binding domain Aave_4189 PF00561 alpha/beta hydrolase fold Aave_4191 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aave_4192 PF03401 Tripartite tricarboxylate transporter family receptor Aave_4193 PF00351 Biopterin-dependent aromatic amino acid hydroxylase Aave_4195 PF13193 AMP-binding enzyme C-terminal domain Aave_4195 PF00501 AMP-binding enzyme Aave_4196 PF13407 Periplasmic binding protein domain Aave_4197 PF00005 ABC transporter Aave_4198 PF02653 Branched-chain amino acid transport system / permease component Aave_4199 PF00356 Bacterial regulatory proteins, lacI family Aave_4200 PF00294 pfkB family carbohydrate kinase Aave_4201 PF05025 RbsD / FucU transport protein family Aave_4203 PF10145 Phage-related minor tail protein Aave_4203 PF01551 Peptidase family M23 Aave_4203 PF01464 Transglycosylase SLT domain Aave_4204 PF01812 5-formyltetrahydrofolate cyclo-ligase family Aave_4205 PF00990 Diguanylate cyclase, GGDEF domain Aave_4205 PF00563 EAL domain Aave_4205 PF03707 Bacterial signalling protein N terminal repeat Aave_4206 PF13417 Glutathione S-transferase, N-terminal domain Aave_4206 PF00043 Glutathione S-transferase, C-terminal domain Aave_4208 PF01743 Poly A polymerase head domain Aave_4208 PF01966 HD domain Aave_4208 PF12627 Probable RNA and SrmB- binding site of polymerase A Aave_4209 PF00085 Thioredoxin Aave_4210 PF02358 Trehalose-phosphatase Aave_4211 PF00723 Glycosyl hydrolases family 15 Aave_4212 PF00982 Glycosyltransferase family 20 Aave_4216 PF00668 Condensation domain Aave_4216 PF00550 Phosphopantetheine attachment site Aave_4216 PF00501 AMP-binding enzyme Aave_4216 PF13193 AMP-binding enzyme C-terminal domain Aave_4218 PF00583 Acetyltransferase (GNAT) family Aave_4219 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Aave_4220 PF00202 Aminotransferase class-III Aave_4221 PF00282 Pyridoxal-dependent decarboxylase conserved domain Aave_4222 PF00497 Bacterial extracellular solute-binding proteins, family 3 Aave_4227 PF04328 Selenoprotein, putative Aave_4228 PF02554 Carbon starvation protein CstA Aave_4228 PF13722 5TM C-terminal transporter carbon starvation CstA Aave_4229 PF00072 Response regulator receiver domain Aave_4229 PF00196 Bacterial regulatory proteins, luxR family Aave_4230 PF07730 Histidine kinase Aave_4230 PF17200 Single Cache domain 2 Aave_4231 PF01171 PP-loop family Aave_4233 PF00300 Histidine phosphatase superfamily (branch 1) Aave_4234 PF01168 Alanine racemase, N-terminal domain Aave_4234 PF14031 Putative serine dehydratase domain Aave_4237 PF05496 Holliday junction DNA helicase RuvB P-loop domain Aave_4237 PF05491 RuvB C-terminal winged helix domain Aave_4237 PF17864 RuvB AAA lid domain Aave_4240 PF07499 RuvA, C-terminal domain Aave_4240 PF01330 RuvA N terminal domain Aave_4241 PF02562 PhoH-like protein Aave_4242 PF02130 Uncharacterized protein family UPF0054 Aave_4243 PF02580 D-Tyr-tRNA(Tyr) deacylase Aave_4244 PF01545 Cation efflux family Aave_4244 PF16916 Dimerisation domain of Zinc Transporter Aave_4245 PF00271 Helicase conserved C-terminal domain Aave_4245 PF00270 DEAD/DEAH box helicase Aave_4245 PF03880 DbpA RNA binding domain Aave_4246 PF01048 Phosphorylase superfamily Aave_4246 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus Aave_4247 PF05230 MASE2 domain Aave_4247 PF00990 Diguanylate cyclase, GGDEF domain Aave_4250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Aave_4251 PF00294 pfkB family carbohydrate kinase Aave_4252 PF00381 PTS HPr component phosphorylation site Aave_4252 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Aave_4252 PF00391 PEP-utilising enzyme, mobile domain Aave_4252 PF05524 PEP-utilising enzyme, N-terminal Aave_4252 PF02896 PEP-utilising enzyme, TIM barrel domain Aave_4253 PF00356 Bacterial regulatory proteins, lacI family Aave_4256 PF00012 Hsp70 protein Aave_4257 PF00082 Subtilase family Aave_4258 PF02222 ATP-grasp domain Aave_4259 PF00005 ABC transporter Aave_4260 PF01061 ABC-2 type transporter Aave_4261 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aave_4261 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aave_4262 PF01614 Bacterial transcriptional regulator Aave_4262 PF09339 IclR helix-turn-helix domain Aave_4263 PF01613 Flavin reductase like domain Aave_4265 PF03401 Tripartite tricarboxylate transporter family receptor Aave_4266 PF01042 Endoribonuclease L-PSP Aave_4267 PF04909 Amidohydrolase Aave_4268 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aave_4269 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aave_4270 PF03328 HpcH/HpaI aldolase/citrate lyase family Aave_4271 PF01047 MarR family Aave_4272 PF02566 OsmC-like protein Aave_4274 PF00069 Protein kinase domain Aave_4274 PF03793 PASTA domain Aave_4275 PF01636 Phosphotransferase enzyme family Aave_4276 PF00486 Transcriptional regulatory protein, C terminal Aave_4276 PF00072 Response regulator receiver domain Aave_4278 PF01547 Bacterial extracellular solute-binding protein Aave_4279 PF01627 Hpt domain Aave_4279 PF00512 His Kinase A (phospho-acceptor) domain Aave_4279 PF00072 Response regulator receiver domain Aave_4279 PF17149 Periplasmic sensor domain found in signal transduction proteins Aave_4279 PF00672 HAMP domain Aave_4279 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4283 PF14220 Domain of unknown function (DUF4329) Aave_4283 PF05593 RHS Repeat Aave_4283 PF03527 RHS protein Aave_4289 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4289 PF00183 Hsp90 protein Aave_4291 PF00849 RNA pseudouridylate synthase Aave_4291 PF01479 S4 domain Aave_4292 PF00990 Diguanylate cyclase, GGDEF domain Aave_4292 PF00563 EAL domain Aave_4292 PF03707 Bacterial signalling protein N terminal repeat Aave_4294 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_4294 PF02203 Tar ligand binding domain homologue Aave_4294 PF00672 HAMP domain Aave_4295 PF13545 Crp-like helix-turn-helix domain Aave_4295 PF00027 Cyclic nucleotide-binding domain Aave_4297 PF00291 Pyridoxal-phosphate dependent enzyme Aave_4298 PF03372 Endonuclease/Exonuclease/phosphatase family Aave_4299 PF13091 PLD-like domain Aave_4300 PF03706 Lysylphosphatidylglycerol synthase TM region Aave_4303 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_4303 PF02203 Tar ligand binding domain homologue Aave_4303 PF00672 HAMP domain Aave_4304 PF03401 Tripartite tricarboxylate transporter family receptor Aave_4305 PF00596 Class II Aldolase and Adducin N-terminal domain Aave_4306 PF01012 Electron transfer flavoprotein domain Aave_4306 PF00766 Electron transfer flavoprotein FAD-binding domain Aave_4307 PF01012 Electron transfer flavoprotein domain Aave_4309 PF03401 Tripartite tricarboxylate transporter family receptor Aave_4310 PF02515 CoA-transferase family III Aave_4311 PF00378 Enoyl-CoA hydratase/isomerase Aave_4312 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_4312 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_4312 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_4313 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_4313 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_4313 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_4314 PF00378 Enoyl-CoA hydratase/isomerase Aave_4314 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aave_4314 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aave_4315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_4315 PF03466 LysR substrate binding domain Aave_4316 PF01435 Peptidase family M48 Aave_4319 PF01979 Amidohydrolase family Aave_4320 PF00672 HAMP domain Aave_4320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4320 PF00512 His Kinase A (phospho-acceptor) domain Aave_4321 PF00486 Transcriptional regulatory protein, C terminal Aave_4321 PF00072 Response regulator receiver domain Aave_4322 PF02321 Outer membrane efflux protein Aave_4324 PF02687 FtsX-like permease family Aave_4324 PF12704 MacB-like periplasmic core domain Aave_4324 PF00005 ABC transporter Aave_4328 PF00892 EamA-like transporter family Aave_4330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Aave_4333 PF00202 Aminotransferase class-III Aave_4341 PF17760 UvrA interaction domain Aave_4341 PF00005 ABC transporter Aave_4341 PF17755 UvrA DNA-binding domain Aave_4342 PF13458 Periplasmic binding protein Aave_4343 PF13609 Gram-negative porin Aave_4344 PF13609 Gram-negative porin Aave_4345 PF08946 Osmosensory transporter coiled coil Aave_4345 PF00083 Sugar (and other) transporter Aave_4346 PF01323 DSBA-like thioredoxin domain Aave_4349 PF00682 HMGL-like Aave_4350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aave_4351 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Aave_4351 PF02785 Biotin carboxylase C-terminal domain Aave_4351 PF00364 Biotin-requiring enzyme Aave_4351 PF00289 Biotin carboxylase, N-terminal domain Aave_4353 PF00378 Enoyl-CoA hydratase/isomerase Aave_4354 PF01039 Carboxyl transferase domain Aave_4355 PF00501 AMP-binding enzyme Aave_4355 PF13193 AMP-binding enzyme C-terminal domain Aave_4360 PF13419 Haloacid dehalogenase-like hydrolase Aave_4361 PF00072 Response regulator receiver domain Aave_4361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4361 PF00512 His Kinase A (phospho-acceptor) domain Aave_4361 PF01627 Hpt domain Aave_4364 PF03575 Peptidase family S51 Aave_4365 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_4365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_4365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_4368 PF02803 Thiolase, C-terminal domain Aave_4368 PF00108 Thiolase, N-terminal domain Aave_4369 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) Aave_4370 PF00484 Carbonic anhydrase Aave_4371 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aave_4371 PF02770 Acyl-CoA dehydrogenase, middle domain Aave_4371 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aave_4372 PF13411 MerR HTH family regulatory protein Aave_4374 PF00072 Response regulator receiver domain Aave_4374 PF01339 CheB methylesterase Aave_4375 PF03975 CheD chemotactic sensory transduction Aave_4376 PF03705 CheR methyltransferase, all-alpha domain Aave_4376 PF01739 CheR methyltransferase, SAM binding domain Aave_4377 PF01584 CheW-like domain Aave_4378 PF01627 Hpt domain Aave_4378 PF01584 CheW-like domain Aave_4378 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4378 PF02895 Signal transducing histidine kinase, homodimeric domain Aave_4378 PF09078 CheY binding Aave_4379 PF00072 Response regulator receiver domain Aave_4381 PF07730 Histidine kinase Aave_4381 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4381 PF05231 MASE1 Aave_4382 PF00072 Response regulator receiver domain Aave_4382 PF00196 Bacterial regulatory proteins, luxR family Aave_4383 PF01311 Bacterial export proteins, family 1 Aave_4384 PF01313 Bacterial export proteins, family 3 Aave_4385 PF00813 FliP family Aave_4387 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Aave_4387 PF16973 Flagellar motor switch protein FliN N-terminal Aave_4388 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Aave_4388 PF02154 Flagellar motor switch protein FliM Aave_4389 PF03748 Flagellar basal body-associated protein FliL Aave_4392 PF18269 T3SS EscN ATPase C-terminal domain Aave_4392 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aave_4394 PF01706 FliG C-terminal domain Aave_4394 PF14842 FliG N-terminal domain Aave_4394 PF14841 FliG middle domain Aave_4395 PF08345 Flagellar M-ring protein C-terminal Aave_4395 PF01514 Secretory protein of YscJ/FliF family Aave_4398 PF02561 Flagellar protein FliS Aave_4399 PF07196 Flagellin hook IN motif Aave_4399 PF07195 Flagellar hook-associated protein 2 C-terminus Aave_4399 PF02465 Flagellar hook-associated protein 2 N-terminus Aave_4400 PF00669 Bacterial flagellin N-terminal helical region Aave_4400 PF00700 Bacterial flagellin C-terminal helical region Aave_4401 PF00669 Bacterial flagellin N-terminal helical region Aave_4401 PF00700 Bacterial flagellin C-terminal helical region Aave_4402 PF08889 WbqC-like protein family Aave_4403 PF13649 Methyltransferase domain Aave_4405 PF01266 FAD dependent oxidoreductase Aave_4406 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Aave_4407 PF00535 Glycosyl transferase family 2 Aave_4408 PF01618 MotA/TolQ/ExbB proton channel family Aave_4409 PF13677 Membrane MotB of proton-channel complex MotA/MotB Aave_4409 PF00691 OmpA family Aave_4410 PF00072 Response regulator receiver domain Aave_4411 PF04344 Chemotaxis phosphatase, CheZ Aave_4412 PF01312 FlhB HrpN YscU SpaS Family Aave_4413 PF00771 FHIPEP family Aave_4414 PF00448 SRP54-type protein, GTPase domain Aave_4416 PF04545 Sigma-70, region 4 Aave_4416 PF04539 Sigma-70 region 3 Aave_4416 PF04542 Sigma-70 region 2 Aave_4420 PF00460 Flagella basal body rod protein Aave_4421 PF00460 Flagella basal body rod protein Aave_4421 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aave_4422 PF03963 Flagellar hook capping protein - N-terminal region Aave_4422 PF13861 FlgD Tudor-like domain Aave_4422 PF13860 FlgD Ig-like domain Aave_4423 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aave_4423 PF00460 Flagella basal body rod protein Aave_4423 PF07559 Flagellar basal body protein FlaE Aave_4424 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aave_4424 PF00460 Flagella basal body rod protein Aave_4425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aave_4425 PF00460 Flagella basal body rod protein Aave_4426 PF02107 Flagellar L-ring protein Aave_4428 PF02119 Flagellar P-ring protein Aave_4429 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Aave_4429 PF10135 Rod binding protein Aave_4430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aave_4430 PF00460 Flagella basal body rod protein Aave_4431 PF00669 Bacterial flagellin N-terminal helical region Aave_4431 PF00700 Bacterial flagellin C-terminal helical region Aave_4434 PF00155 Aminotransferase class I and II Aave_4434 PF00392 Bacterial regulatory proteins, gntR family Aave_4435 PF01810 LysE type translocator Aave_4436 PF00892 EamA-like transporter family Aave_4437 PF00155 Aminotransferase class I and II Aave_4438 PF13417 Glutathione S-transferase, N-terminal domain Aave_4438 PF00043 Glutathione S-transferase, C-terminal domain Aave_4439 PF02567 Phenazine biosynthesis-like protein Aave_4441 PF00291 Pyridoxal-phosphate dependent enzyme Aave_4446 PF02203 Tar ligand binding domain homologue Aave_4446 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_4446 PF00672 HAMP domain Aave_4452 PF01970 Tripartite tricarboxylate transporter TctA family Aave_4453 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_4453 PF03466 LysR substrate binding domain Aave_4454 PF08240 Alcohol dehydrogenase GroES-like domain Aave_4454 PF00107 Zinc-binding dehydrogenase Aave_4455 PF02272 DHHA1 domain Aave_4455 PF01411 tRNA synthetases class II (A) Aave_4455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Aave_4461 PF03741 Integral membrane protein TerC family Aave_4462 PF03466 LysR substrate binding domain Aave_4462 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_4466 PF00884 Sulfatase Aave_4466 PF16385 Domain of unknown function Aave_4467 PF03401 Tripartite tricarboxylate transporter family receptor Aave_4469 PF01208 Uroporphyrinogen decarboxylase (URO-D) Aave_4471 PF00270 DEAD/DEAH box helicase Aave_4471 PF17764 3′ DNA-binding domain (3′BD) Aave_4471 PF00271 Helicase conserved C-terminal domain Aave_4471 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Aave_4471 PF18074 Primosomal protein N C-terminal domain Aave_4475 PF00580 UvrD/REP helicase N-terminal domain Aave_4475 PF13361 UvrD-like helicase C-terminal domain Aave_4476 PF02253 Phospholipase A1 Aave_4478 PF00582 Universal stress protein family Aave_4479 PF01702 Queuine tRNA-ribosyltransferase Aave_4492 PF01037 Lrp/AsnC ligand binding domain Aave_4493 PF00291 Pyridoxal-phosphate dependent enzyme Aave_4494 PF03401 Tripartite tricarboxylate transporter family receptor Aave_4495 PF02203 Tar ligand binding domain homologue Aave_4495 PF00672 HAMP domain Aave_4495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_4503 PF03401 Tripartite tricarboxylate transporter family receptor Aave_4505 PF13454 FAD-NAD(P)-binding Aave_4507 PF01266 FAD dependent oxidoreductase Aave_4511 PF13350 Tyrosine phosphatase family Aave_4514 PF00528 Binding-protein-dependent transport system inner membrane component Aave_4515 PF00005 ABC transporter Aave_4518 PF04244 Deoxyribodipyrimidine photo-lyase-related protein Aave_4520 PF13657 HipA N-terminal domain Aave_4520 PF07804 HipA-like C-terminal domain Aave_4521 PF13391 HNH endonuclease Aave_4522 PF07995 Glucose / Sorbosone dehydrogenase Aave_4523 PF00080 Copper/zinc superoxide dismutase (SODC) Aave_4525 PF02954 Bacterial regulatory protein, Fis family Aave_4525 PF00072 Response regulator receiver domain Aave_4525 PF00158 Sigma-54 interaction domain Aave_4526 PF00672 HAMP domain Aave_4526 PF00989 PAS fold Aave_4526 PF00512 His Kinase A (phospho-acceptor) domain Aave_4526 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4528 PF01029 NusB family Aave_4528 PF01189 16S rRNA methyltransferase RsmB/F Aave_4530 PF04983 RNA polymerase Rpb1, domain 3 Aave_4530 PF04997 RNA polymerase Rpb1, domain 1 Aave_4530 PF00623 RNA polymerase Rpb1, domain 2 Aave_4530 PF05000 RNA polymerase Rpb1, domain 4 Aave_4530 PF04998 RNA polymerase Rpb1, domain 5 Aave_4531 PF04563 RNA polymerase beta subunit Aave_4531 PF04561 RNA polymerase Rpb2, domain 2 Aave_4531 PF04560 RNA polymerase Rpb2, domain 7 Aave_4531 PF00562 RNA polymerase Rpb2, domain 6 Aave_4531 PF10385 RNA polymerase beta subunit external 1 domain Aave_4531 PF04565 RNA polymerase Rpb2, domain 3 Aave_4532 PF16320 Ribosomal protein L7/L12 dimerisation domain Aave_4532 PF00542 Ribosomal protein L7/L12 C-terminal domain Aave_4533 PF00466 Ribosomal protein L10 Aave_4534 PF00687 Ribosomal protein L1p/L10e family Aave_4535 PF00298 Ribosomal protein L11, RNA binding domain Aave_4535 PF03946 Ribosomal protein L11, N-terminal domain Aave_4536 PF02357 Transcription termination factor nusG Aave_4536 PF00467 KOW motif Aave_4537 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Aave_4538 PF03143 Elongation factor Tu C-terminal domain Aave_4538 PF03144 Elongation factor Tu domain 2 Aave_4538 PF00009 Elongation factor Tu GTP binding domain Aave_4539 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Aave_4539 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Aave_4540 PF03594 Benzoate membrane transport protein Aave_4541 PF02705 K+ potassium transporter Aave_4543 PF02386 Cation transport protein Aave_4544 PF02080 TrkA-C domain Aave_4544 PF02254 TrkA-N domain Aave_4545 PF00171 Aldehyde dehydrogenase family Aave_4548 PF09334 tRNA synthetases class I (M) Aave_4548 PF13603 Leucyl-tRNA synthetase, Domain 2 Aave_4548 PF00133 tRNA synthetases class I (I, L, M and V) Aave_4548 PF08264 Anticodon-binding domain of tRNA Aave_4550 PF00563 EAL domain Aave_4550 PF00990 Diguanylate cyclase, GGDEF domain Aave_4550 PF03707 Bacterial signalling protein N terminal repeat Aave_4550 PF13188 PAS domain Aave_4551 PF02472 Biopolymer transport protein ExbD/TolR Aave_4552 PF01618 MotA/TolQ/ExbB proton channel family Aave_4554 PF04355 SmpA / OmlA family Aave_4555 PF01475 Ferric uptake regulator family Aave_4556 PF02603 HPr Serine kinase N terminus Aave_4556 PF07475 HPr Serine kinase C-terminal domain Aave_4557 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Aave_4558 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Aave_4559 PF01259 SAICAR synthetase Aave_4561 PF00085 Thioredoxin Aave_4562 PF00731 AIR carboxylase Aave_4563 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Aave_4563 PF02222 ATP-grasp domain Aave_4564 PF03481 Putative GTP-binding controlling metal-binding Aave_4564 PF01300 Telomere recombination Aave_4569 PF00814 Glycoprotease family Aave_4572 PF01544 CorA-like Mg2+ transporter protein Aave_4573 PF01048 Phosphorylase superfamily Aave_4574 PF00501 AMP-binding enzyme Aave_4574 PF13193 AMP-binding enzyme C-terminal domain Aave_4576 PF01116 Fructose-bisphosphate aldolase class-II Aave_4577 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4577 PF00512 His Kinase A (phospho-acceptor) domain Aave_4578 PF00486 Transcriptional regulatory protein, C terminal Aave_4578 PF00072 Response regulator receiver domain Aave_4581 PF00224 Pyruvate kinase, barrel domain Aave_4581 PF02887 Pyruvate kinase, alpha/beta domain Aave_4582 PF00557 Metallopeptidase family M24 Aave_4582 PF05195 Aminopeptidase P, N-terminal domain Aave_4583 PF00483 Nucleotidyl transferase Aave_4584 PF02675 S-adenosylmethionine decarboxylase Aave_4585 PF00456 Transketolase, thiamine diphosphate binding domain Aave_4585 PF02780 Transketolase, C-terminal domain Aave_4585 PF02779 Transketolase, pyrimidine binding domain Aave_4588 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Aave_4588 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Aave_4590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_4590 PF03466 LysR substrate binding domain Aave_4592 PF00691 OmpA family Aave_4592 PF05736 OprF membrane domain Aave_4597 PF07722 Peptidase C26 Aave_4605 PF05726 Pirin C-terminal cupin domain Aave_4605 PF02678 Pirin Aave_4608 PF00924 Mechanosensitive ion channel Aave_4610 PF00884 Sulfatase Aave_4611 PF00106 short chain dehydrogenase Aave_4614 PF06983 3-demethylubiquinone-9 3-methyltransferase Aave_4619 PF13361 UvrD-like helicase C-terminal domain Aave_4619 PF00580 UvrD/REP helicase N-terminal domain Aave_4623 PF06271 RDD family Aave_4627 PF01751 Toprim domain Aave_4627 PF01131 DNA topoisomerase Aave_4629 PF02237 Biotin protein ligase C terminal domain Aave_4629 PF03099 Biotin/lipoate A/B protein ligase family Aave_4629 PF08279 HTH domain Aave_4634 PF03401 Tripartite tricarboxylate transporter family receptor Aave_4637 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4637 PF08521 Two-component sensor kinase N-terminal Aave_4637 PF00512 His Kinase A (phospho-acceptor) domain Aave_4638 PF00486 Transcriptional regulatory protein, C terminal Aave_4638 PF00072 Response regulator receiver domain Aave_4640 PF00154 recA bacterial DNA recombination protein Aave_4641 PF02631 RecX family Aave_4643 PF07549 SecD/SecF GG Motif Aave_4643 PF02355 Protein export membrane protein Aave_4644 PF07549 SecD/SecF GG Motif Aave_4644 PF13721 SecD export protein N-terminal TM region Aave_4644 PF02355 Protein export membrane protein Aave_4645 PF02699 Preprotein translocase subunit Aave_4647 PF01037 Lrp/AsnC ligand binding domain Aave_4649 PF05977 Transmembrane secretion effector Aave_4651 PF06725 3D domain Aave_4651 PF03562 MltA specific insert domain Aave_4652 PF04972 BON domain Aave_4652 PF00691 OmpA family Aave_4653 PF00196 Bacterial regulatory proteins, luxR family Aave_4653 PF00072 Response regulator receiver domain Aave_4654 PF00989 PAS fold Aave_4654 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4654 PF00512 His Kinase A (phospho-acceptor) domain Aave_4655 PF00795 Carbon-nitrogen hydrolase Aave_4657 PF03710 Glutamate-ammonia ligase adenylyltransferase Aave_4657 PF08335 GlnD PII-uridylyltransferase Aave_4658 PF00668 Condensation domain Aave_4658 PF00550 Phosphopantetheine attachment site Aave_4658 PF00501 AMP-binding enzyme Aave_4658 PF13193 AMP-binding enzyme C-terminal domain Aave_4658 PF00975 Thioesterase domain Aave_4661 PF08361 MAATS-type transcriptional repressor, C-terminal region Aave_4661 PF00440 Bacterial regulatory proteins, tetR family Aave_4662 PF02321 Outer membrane efflux protein Aave_4663 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Aave_4664 PF00873 AcrB/AcrD/AcrF family Aave_4666 PF01966 HD domain Aave_4666 PF11871 Domain of unknown function (DUF3391) Aave_4667 PF00255 Glutathione peroxidase Aave_4668 PF00043 Glutathione S-transferase, C-terminal domain Aave_4668 PF13417 Glutathione S-transferase, N-terminal domain Aave_4669 PF00206 Lyase Aave_4669 PF08328 Adenylosuccinate lyase C-terminal Aave_4670 PF07152 YaeQ protein Aave_4673 PF03741 Integral membrane protein TerC family Aave_4675 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Aave_4676 PF01435 Peptidase family M48 Aave_4676 PF13181 Tetratricopeptide repeat Aave_4677 PF01967 MoaC family Aave_4678 PF15864 Protein glycosylation ligase Aave_4678 PF11846 Virulence factor membrane-bound polymerase, C-terminal Aave_4678 PF04932 O-Antigen ligase Aave_4679 PF00114 Pilin (bacterial filament) Aave_4679 PF07963 Prokaryotic N-terminal methylation motif Aave_4680 PF00498 FHA domain Aave_4680 PF12773 Double zinc ribbon Aave_4682 PF03741 Integral membrane protein TerC family Aave_4683 PF02629 CoA binding domain Aave_4683 PF00549 CoA-ligase Aave_4684 PF00549 CoA-ligase Aave_4684 PF08442 ATP-grasp domain Aave_4685 PF01118 Semialdehyde dehydrogenase, NAD binding domain Aave_4686 PF02481 DNA recombination-mediator protein A Aave_4686 PF17782 DprA winged helix domain Aave_4688 PF01327 Polypeptide deformylase Aave_4690 PF00551 Formyl transferase Aave_4690 PF02911 Formyl transferase, C-terminal domain Aave_4693 PF00162 Phosphoglycerate kinase Aave_4695 PF00892 EamA-like transporter family Aave_4696 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Aave_4697 PF01757 Acyltransferase family Aave_4699 PF03401 Tripartite tricarboxylate transporter family receptor Aave_4701 PF00893 Small Multidrug Resistance protein Aave_4702 PF00892 EamA-like transporter family Aave_4703 PF02203 Tar ligand binding domain homologue Aave_4703 PF00672 HAMP domain Aave_4703 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aave_4708 PF17755 UvrA DNA-binding domain Aave_4708 PF17760 UvrA interaction domain Aave_4711 PF07690 Major Facilitator Superfamily Aave_4712 PF00654 Voltage gated chloride channel Aave_4713 PF00436 Single-strand binding protein family Aave_4717 PF04143 Sulphur transport Aave_4719 PF00753 Metallo-beta-lactamase superfamily Aave_4720 PF00563 EAL domain Aave_4720 PF13185 GAF domain Aave_4720 PF00990 Diguanylate cyclase, GGDEF domain Aave_4723 PF02652 L-lactate permease Aave_4725 PF00293 NUDIX domain Aave_4730 PF08448 PAS fold Aave_4730 PF00990 Diguanylate cyclase, GGDEF domain Aave_4731 PF00677 Lumazine binding domain Aave_4732 PF00072 Response regulator receiver domain Aave_4732 PF13188 PAS domain Aave_4732 PF08448 PAS fold Aave_4732 PF00512 His Kinase A (phospho-acceptor) domain Aave_4732 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aave_4737 PF08546 Ketopantoate reductase PanE/ApbA C terminal Aave_4737 PF02558 Ketopantoate reductase PanE/ApbA Aave_4743 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aave_4743 PF03466 LysR substrate binding domain Aave_4744 PF00202 Aminotransferase class-III Aave_4746 PF00171 Aldehyde dehydrogenase family Aave_4748 PF00990 Diguanylate cyclase, GGDEF domain Aave_4748 PF00072 Response regulator receiver domain Aave_4749 PF07729 FCD domain Aave_4749 PF00392 Bacterial regulatory proteins, gntR family Aave_4752 PF02653 Branched-chain amino acid transport system / permease component Aave_4752 PF11862 Domain of unknown function (DUF3382) Aave_4753 PF12399 Branched-chain amino acid ATP-binding cassette transporter Aave_4753 PF00005 ABC transporter Aave_4754 PF00005 ABC transporter Aave_4755 PF01546 Peptidase family M20/M25/M40 Aave_4755 PF07687 Peptidase dimerisation domain Aave_4756 PF07171 MlrC C-terminus Aave_4756 PF07364 Metallopeptidase family M81 Aave_4759 PF01515 Phosphate acetyl/butaryl transferase Aave_4759 PF00390 Malic enzyme, N-terminal domain Aave_4759 PF03949 Malic enzyme, NAD binding domain Aave_4760 PF00545 ribonuclease Aave_4762 PF00398 Ribosomal RNA adenine dimethylase Aave_4763 PF09312 SurA N-terminal domain Aave_4763 PF00639 PPIC-type PPIASE domain Aave_4764 PF04453 LPS transport system D Aave_4765 PF01636 Phosphotransferase enzyme family Aave_4766 PF04452 RNA methyltransferase Aave_4769 PF02463 RecF/RecN/SMC N terminal domain Aave_4769 PF06470 SMC proteins Flexible Hinge Domain Aave_4770 PF07690 Major Facilitator Superfamily Aave_4772 PF12833 Helix-turn-helix domain Aave_4773 PF00324 Amino acid permease Aave_4774 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Aave_4775 PF05985 Ethanolamine ammonia-lyase light chain (EutC) Aave_4776 PF00990 Diguanylate cyclase, GGDEF domain Aave_4776 PF00072 Response regulator receiver domain Aave_4778 PF00561 alpha/beta hydrolase fold Aave_4779 PF01169 Uncharacterized protein family UPF0016 Aave_4780 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Aave_4781 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Aave_4782 PF00106 short chain dehydrogenase Aave_4785 PF01380 SIS domain Aave_4785 PF00571 CBS domain Aave_4786 PF02080 TrkA-C domain Aave_4786 PF02254 TrkA-N domain Aave_4786 PF00999 Sodium/hydrogen exchanger family Aave_4787 PF00156 Phosphoribosyl transferase domain Aave_4788 PF00258 Flavodoxin Aave_4788 PF00667 FAD binding domain Aave_4788 PF00175 Oxidoreductase NAD-binding domain Aave_4791 PF10396 GTP-binding protein TrmE N-terminus Aave_4791 PF01926 50S ribosome-binding GTPase Aave_4791 PF12631 MnmE helical domain Aave_4793 PF14849 YidC periplasmic domain Aave_4793 PF02096 60Kd inner membrane protein Aave_4794 PF01809 Putative membrane protein insertion efficiency factor Aave_4795 PF00825 Ribonuclease P Aave_4796 PF00468 Ribosomal protein L34