Aave_0001 SM00382 ATPases associated with a variety of cellular activities Aave_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Aave_0002 SM00480 DNA polymerase III beta subunit Aave_0003 SM00387 Histidine kinase-like ATPases Aave_0003 SM00433 TopoisomeraseII Aave_0013 SM00487 DEAD-like helicases superfamily Aave_0013 SM00491 Aave_0013 Aave_0016 SM00479 Aave_0016 Aave_0017 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_0019 SM00917 LeuA allosteric (dimerisation) domain Aave_0022 SM00052 Putative diguanylate phosphodiesterase Aave_0022 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Aave_0022 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_0022 SM00091 PAS domain Aave_0022 SM00267 diguanylate cyclase Aave_0032 SM00422 helix_turn_helix, mercury resistance Aave_0035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_0037 SM00257 Lysin motif Aave_0041 SM00448 cheY-homologous receiver domain Aave_0041 SM00862 Transcriptional regulatory protein, C terminal Aave_0042 SM00387 Histidine kinase-like ATPases Aave_0042 SM00388 His Kinase A (phosphoacceptor) domain Aave_0046 SM00382 ATPases associated with a variety of cellular activities Aave_0051 SM01228 Aave_0051 Aave_0056 SM00470 ParB-like nuclease domain Aave_0081 SM00903 Flavin reductase like domain Aave_0082 SM00342 helix_turn_helix, arabinose operon control protein Aave_0104 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0104 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_0105 SM00729 Elongator protein 3, MiaB family, Radical SAM Aave_0111 SM00382 ATPases associated with a variety of cellular activities Aave_0116 SM00346 helix_turn_helix isocitrate lyase regulation Aave_0122 SM00344 helix_turn_helix ASNC type Aave_0127 SM00903 Flavin reductase like domain Aave_0129 SM00631 Aave_0129 Aave_0150 SM00342 helix_turn_helix, arabinose operon control protein Aave_0157 SM00487 DEAD-like helicases superfamily Aave_0157 SM00490 helicase superfamily c-terminal domain Aave_0161 SM00506 Appr-1"-p processing enzyme Aave_0168 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0172 SM00382 ATPases associated with a variety of cellular activities Aave_0172 SM00448 cheY-homologous receiver domain Aave_0173 SM00387 Histidine kinase-like ATPases Aave_0173 SM00388 His Kinase A (phosphoacceptor) domain Aave_0181 SM00341 Helicase and RNase D C-terminal Aave_0181 SM00487 DEAD-like helicases superfamily Aave_0181 SM00490 helicase superfamily c-terminal domain Aave_0181 SM00956 Aave_0181 Aave_0185 SM00488 Aave_0185 Aave_0185 SM00491 Aave_0185 Aave_0188 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Aave_0199 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Aave_0205 SM00062 Bacterial periplasmic substrate-binding proteins Aave_0208 SM00382 ATPases associated with a variety of cellular activities Aave_0211 SM00062 Bacterial periplasmic substrate-binding proteins Aave_0211 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Aave_0212 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_0212 SM00895 Aave_0212 Aave_0214 SM01018 B12 binding domain Aave_0220 SM00267 diguanylate cyclase Aave_0227 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0227 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_0229 SM00387 Histidine kinase-like ATPases Aave_0229 SM00388 His Kinase A (phosphoacceptor) domain Aave_0230 SM00382 ATPases associated with a variety of cellular activities Aave_0230 SM00448 cheY-homologous receiver domain Aave_0231 SM00382 ATPases associated with a variety of cellular activities Aave_0233 SM00938 Nitrogen regulatory protein P-II Aave_0245 SM00945 ProQ/FINO family Aave_0253 SM01005 Alanine racemase, C-terminal domain Aave_0258 SM00346 helix_turn_helix isocitrate lyase regulation Aave_0262 SM00382 ATPases associated with a variety of cellular activities Aave_0274 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_0274 SM00387 Histidine kinase-like ATPases Aave_0274 SM00388 His Kinase A (phosphoacceptor) domain Aave_0275 SM00448 cheY-homologous receiver domain Aave_0275 SM00862 Transcriptional regulatory protein, C terminal Aave_0278 SM00342 helix_turn_helix, arabinose operon control protein Aave_0282 SM00849 Metallo-beta-lactamase superfamily Aave_0291 SM00845 GatB domain Aave_0299 SM00382 ATPases associated with a variety of cellular activities Aave_0301 SM00062 Bacterial periplasmic substrate-binding proteins Aave_0303 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Aave_0307 SM00382 ATPases associated with a variety of cellular activities Aave_0317 SM00387 Histidine kinase-like ATPases Aave_0317 SM00388 His Kinase A (phosphoacceptor) domain Aave_0318 SM00448 cheY-homologous receiver domain Aave_0318 SM00862 Transcriptional regulatory protein, C terminal Aave_0324 SM00347 helix_turn_helix multiple antibiotic resistance protein Aave_0327 SM01004 Delta-aminolevulinic acid dehydratase Aave_0332 SM00936 Penicillin-binding protein 5, C-terminal domain Aave_0335 SM00838 Elongation factor G C-terminus Aave_0335 SM00889 Elongation factor G, domain IV Aave_0337 SM01403 Aave_0337 Aave_0341 SM01382 Aave_0341 Aave_0341 SM01383 Aave_0341 Aave_0344 SM00322 K homology RNA-binding domain Aave_0358 SM00387 Histidine kinase-like ATPases Aave_0358 SM00388 His Kinase A (phosphoacceptor) domain Aave_0359 SM00448 cheY-homologous receiver domain Aave_0359 SM00862 Transcriptional regulatory protein, C terminal Aave_0362 SM00729 Elongator protein 3, MiaB family, Radical SAM Aave_0372 SM00382 ATPases associated with a variety of cellular activities Aave_0376 SM00487 DEAD-like helicases superfamily Aave_0376 SM00490 helicase superfamily c-terminal domain Aave_0407 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0407 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_0411 SM00564 beta-propeller repeat Aave_0414 SM00836 DALR anticodon binding domain Aave_0414 SM01016 Arginyl tRNA synthetase N terminal dom Aave_0418 SM00382 ATPases associated with a variety of cellular activities Aave_0421 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0421 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_0422 SM00981 Aave_0422 Aave_0424 SM00382 ATPases associated with a variety of cellular activities Aave_0428 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0443 SM00830 Chorismate mutase type II Aave_0444 SM00342 helix_turn_helix, arabinose operon control protein Aave_0445 SM00862 Transcriptional regulatory protein, C terminal Aave_0458 SM00368 Leucine rich repeat, ribonuclease inhibitor type Aave_0463 SM00382 ATPases associated with a variety of cellular activities Aave_0512 SM00857 Resolvase, N terminal domain Aave_0518 SM00481 DNA polymerase alpha chain like domain Aave_0540 SM00487 DEAD-like helicases superfamily Aave_0558 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Aave_0558 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Aave_0558 SM00493 Aave_0558 Aave_0578 SM00487 DEAD-like helicases superfamily Aave_0578 SM00490 helicase superfamily c-terminal domain Aave_0579 SM00966 SpoVT / AbrB like domain Aave_0587 SM00986 Uracil DNA glycosylase superfamily Aave_0587 SM00987 UreE urease accessory protein, C-terminal domain Aave_0591 SM00342 helix_turn_helix, arabinose operon control protein Aave_0592 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Aave_0593 SM00487 DEAD-like helicases superfamily Aave_0593 SM00490 helicase superfamily c-terminal domain Aave_0603 SM00420 helix_turn_helix, Deoxyribose operon repressor Aave_0603 SM01134 Aave_0603 Aave_0604 SM00382 ATPases associated with a variety of cellular activities Aave_0605 SM00382 ATPases associated with a variety of cellular activities Aave_0611 SM01374 Aave_0611 Aave_0612 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Aave_0625 SM00363 S4 RNA-binding domain Aave_0625 SM01390 Aave_0625 Aave_0626 SM00662 RNA polymerases D Aave_0632 SM00749 bacterial OsmY and nodulation domain Aave_0636 SM00100 Cyclic nucleotide-monophosphate binding domain Aave_0637 SM00382 ATPases associated with a variety of cellular activities Aave_0649 SM00052 Putative diguanylate phosphodiesterase Aave_0649 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_0649 SM00091 PAS domain Aave_0649 SM00267 diguanylate cyclase Aave_0654 SM00421 helix_turn_helix, Lux Regulon Aave_0654 SM00448 cheY-homologous receiver domain Aave_0658 SM00342 helix_turn_helix, arabinose operon control protein Aave_0661 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Aave_0666 SM00947 Carbonic anhydrase Aave_0667 SM00306 Hint (Hedgehog/Intein) domain N-terminal region Aave_0680 SM00470 ParB-like nuclease domain Aave_0682 SM00530 Helix-turn-helix XRE-family like proteins Aave_0696 SM00342 helix_turn_helix, arabinose operon control protein Aave_0729 SM00382 ATPases associated with a variety of cellular activities Aave_0741 SM00346 helix_turn_helix isocitrate lyase regulation Aave_0746 SM00267 diguanylate cyclase Aave_0749 SM00267 diguanylate cyclase Aave_0767 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Aave_0772 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0782 SM00382 ATPases associated with a variety of cellular activities Aave_0786 SM00382 ATPases associated with a variety of cellular activities Aave_0788 SM00382 ATPases associated with a variety of cellular activities Aave_0792 SM00363 S4 RNA-binding domain Aave_0793 SM00849 Metallo-beta-lactamase superfamily Aave_0795 SM00347 helix_turn_helix multiple antibiotic resistance protein Aave_0803 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0805 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Aave_0806 SM00091 PAS domain Aave_0806 SM00267 diguanylate cyclase Aave_0807 SM00833 Cobalamin synthesis protein cobW C-terminal domain Aave_0811 SM00382 ATPases associated with a variety of cellular activities Aave_0811 SM01086 C-terminal, D2-small domain, of ClpB protein Aave_0825 SM00842 Cell division protein FtsA Aave_0826 SM00864 Tubulin/FtsZ family, GTPase domain Aave_0826 SM00865 Tubulin/FtsZ family, C-terminal domain Aave_0830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_0831 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0831 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_0835 SM00563 Phosphate acyltransferases Aave_0839 SM00346 helix_turn_helix isocitrate lyase regulation Aave_0843 SM00955 Aave_0843 Aave_0858 SM00878 Biotin carboxylase C-terminal domain Aave_0865 SM00644 Aave_0865 Aave_0866 SM00382 ATPases associated with a variety of cellular activities Aave_0866 SM00448 cheY-homologous receiver domain Aave_0867 SM00387 Histidine kinase-like ATPases Aave_0867 SM00388 His Kinase A (phosphoacceptor) domain Aave_0870 SM00382 ATPases associated with a variety of cellular activities Aave_0870 SM00962 SRP54-type protein, GTPase domain Aave_0870 SM00963 SRP54-type protein, helical bundle domain Aave_0872 SM00382 ATPases associated with a variety of cellular activities Aave_0872 SM00448 cheY-homologous receiver domain Aave_0874 SM00387 Histidine kinase-like ATPases Aave_0874 SM00388 His Kinase A (phosphoacceptor) domain Aave_0875 SM00729 Elongator protein 3, MiaB family, Radical SAM Aave_0881 SM00382 ATPases associated with a variety of cellular activities Aave_0890 SM00116 Domain in cystathionine beta-synthase and other proteins. Aave_0893 SM00267 diguanylate cyclase Aave_0896 SM00798 AICARFT/IMPCHase bienzyme Aave_0896 SM00851 MGS-like domain Aave_0901 SM00448 cheY-homologous receiver domain Aave_0902 SM00448 cheY-homologous receiver domain Aave_0903 SM00260 Two component signalling adaptor domain Aave_0904 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0905 SM00073 Histidine Phosphotransfer domain Aave_0905 SM00260 Two component signalling adaptor domain Aave_0905 SM00387 Histidine kinase-like ATPases Aave_0905 SM00448 cheY-homologous receiver domain Aave_0905 SM01231 Aave_0905 Aave_0908 SM00732 Likely ribonuclease with RNase H fold. Aave_0912 SM00563 Phosphate acyltransferases Aave_0913 SM00382 ATPases associated with a variety of cellular activities Aave_0916 SM00382 ATPases associated with a variety of cellular activities Aave_0927 SM00855 Phosphoglycerate mutase family Aave_0938 SM00382 ATPases associated with a variety of cellular activities Aave_0939 SM00382 ATPases associated with a variety of cellular activities Aave_0940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_0940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_0946 SM00883 Chaperonin 10 Kd subunit Aave_0949 SM00984 UDP binding domain Aave_0955 SM00382 ATPases associated with a variety of cellular activities Aave_0965 SM00028 Tetratricopeptide repeats Aave_0991 SM00849 Metallo-beta-lactamase superfamily Aave_0994 SM01219 Aave_0994 Aave_1000 SM00965 Secretin and TonB N terminus short domain Aave_1001 SM00634 Bacterial Ig-like domain (group 1) Aave_1004 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Aave_1007 SM01321 Aave_1007 Aave_1010 SM00062 Bacterial periplasmic substrate-binding proteins Aave_1010 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Aave_1012 SM00382 ATPases associated with a variety of cellular activities Aave_1013 SM00382 ATPases associated with a variety of cellular activities Aave_1019 SM00382 ATPases associated with a variety of cellular activities Aave_1061 SM00327 von Willebrand factor (vWF) type A domain Aave_1066 SM00986 Uracil DNA glycosylase superfamily Aave_1066 SM00987 UreE urease accessory protein, C-terminal domain Aave_1068 SM00382 ATPases associated with a variety of cellular activities Aave_1081 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_1081 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_1089 SM00822 Aave_1089 Aave_1092 SM00382 ATPases associated with a variety of cellular activities Aave_1095 SM00919 Malic enzyme, NAD binding domain Aave_1095 SM01274 Aave_1095 Aave_1096 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_1096 SM00895 Aave_1096 Aave_1099 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_1099 SM00895 Aave_1099 Aave_1100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_1100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_1112 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_1112 SM00895 Aave_1112 Aave_1120 SM00052 Putative diguanylate phosphodiesterase Aave_1120 SM00267 diguanylate cyclase Aave_1121 SM00421 helix_turn_helix, Lux Regulon Aave_1121 SM00448 cheY-homologous receiver domain Aave_1122 SM00387 Histidine kinase-like ATPases Aave_1122 SM01049 Aave_1122 Aave_1127 SM00091 PAS domain Aave_1127 SM00267 diguanylate cyclase Aave_1129 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Aave_1130 SM01092 CO dehydrogenase flavoprotein C-terminal domain Aave_1132 SM00382 ATPases associated with a variety of cellular activities Aave_1148 SM00487 DEAD-like helicases superfamily Aave_1148 SM00490 helicase superfamily c-terminal domain Aave_1150 SM00528 Domain in histone-like proteins of HNS family Aave_1152 SM00052 Putative diguanylate phosphodiesterase Aave_1152 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_1152 SM00091 PAS domain Aave_1152 SM00267 diguanylate cyclase Aave_1153 SM00052 Putative diguanylate phosphodiesterase Aave_1153 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_1153 SM00091 PAS domain Aave_1153 SM00267 diguanylate cyclase Aave_1158 SM00344 helix_turn_helix ASNC type Aave_1160 SM00899 Aave_1160 Aave_1171 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. Aave_1173 SM00316 Ribosomal protein S1-like RNA-binding domain Aave_1174 SM00363 S4 RNA-binding domain Aave_1184 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Aave_1185 SM00822 Aave_1185 Aave_1186 SM00823 Phosphopantetheine attachment site Aave_1187 SM00825 Beta-ketoacyl synthase Aave_1192 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Aave_1193 SM00838 Elongation factor G C-terminus Aave_1196 SM00358 Double-stranded RNA binding motif Aave_1196 SM00535 Ribonuclease III family Aave_1211 SM00464 Found in ATP-dependent protease La (LON) Aave_1219 SM00859 Semialdehyde dehydrogenase, NAD binding domain Aave_1221 SM01329 Aave_1221 Aave_1225 SM00271 DnaJ molecular chaperone homology domain Aave_1232 SM00382 ATPases associated with a variety of cellular activities Aave_1234 SM00670 Large family of predicted nucleotide-binding domains Aave_1241 SM00852 Probable molybdopterin binding domain Aave_1243 SM01130 Aave_1243 Aave_1249 SM00382 ATPases associated with a variety of cellular activities Aave_1249 SM01086 C-terminal, D2-small domain, of ClpB protein Aave_1256 SM00155 Phospholipase D. Active site motifs. Aave_1258 SM01387 Aave_1258 Aave_1259 SM00316 Ribosomal protein S1-like RNA-binding domain Aave_1259 SM00322 K homology RNA-binding domain Aave_1260 SM00829 Enoylreductase Aave_1268 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Aave_1269 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Aave_1279 SM00382 ATPases associated with a variety of cellular activities Aave_1280 SM00382 ATPases associated with a variety of cellular activities Aave_1281 SM00382 ATPases associated with a variety of cellular activities Aave_1293 SM00382 ATPases associated with a variety of cellular activities Aave_1300 SM00853 MutL C terminal dimerisation domain Aave_1300 SM01340 Aave_1300 Aave_1305 SM00646 Aave_1305 Aave_1315 SM00052 Putative diguanylate phosphodiesterase Aave_1316 SM00052 Putative diguanylate phosphodiesterase Aave_1322 SM01192 Aave_1322 Aave_1322 SM01193 Aave_1322 Aave_1332 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. Aave_1335 SM00849 Metallo-beta-lactamase superfamily Aave_1337 SM01130 Aave_1337 Aave_1340 SM00387 Histidine kinase-like ATPases Aave_1340 SM00433 TopoisomeraseII Aave_1342 SM00434 DNA Topoisomerase IV Aave_1343 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_1343 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_1344 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_1344 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_1352 SM00849 Metallo-beta-lactamase superfamily Aave_1357 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Aave_1393 SM01130 Aave_1393 Aave_1397 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Aave_1405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_1405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_1407 SM00400 zinc finger Aave_1407 SM00493 Aave_1407 Aave_1408 SM00052 Putative diguanylate phosphodiesterase Aave_1412 SM00267 diguanylate cyclase Aave_1413 SM00829 Enoylreductase Aave_1416 SM00257 Lysin motif Aave_1417 SM00363 S4 RNA-binding domain Aave_1419 SM00363 S4 RNA-binding domain Aave_1420 SM00562 Aave_1420 Aave_1422 SM00028 Tetratricopeptide repeats Aave_1427 SM00564 beta-propeller repeat Aave_1431 SM00244 prohibitin homologues Aave_1432 SM00244 prohibitin homologues Aave_1434 SM00788 Adenylosuccinate synthetase Aave_1441 SM00852 Probable molybdopterin binding domain Aave_1442 SM01230 Aave_1442 Aave_1444 SM00387 Histidine kinase-like ATPases Aave_1444 SM00388 His Kinase A (phosphoacceptor) domain Aave_1445 SM00382 ATPases associated with a variety of cellular activities Aave_1445 SM00448 cheY-homologous receiver domain Aave_1457 SM00382 ATPases associated with a variety of cellular activities Aave_1457 SM00464 Found in ATP-dependent protease La (LON) Aave_1458 SM00382 ATPases associated with a variety of cellular activities Aave_1458 SM00994 ClpX C4-type zinc finger Aave_1458 SM01086 C-terminal, D2-small domain, of ClpB protein Aave_1466 SM00219 Tyrosine kinase, catalytic domain Aave_1469 SM00331 Sigma factor PP2C-like phosphatases Aave_1469 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Aave_1482 SM00382 ATPases associated with a variety of cellular activities Aave_1482 SM01086 C-terminal, D2-small domain, of ClpB protein Aave_1485 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Aave_1486 SM01092 CO dehydrogenase flavoprotein C-terminal domain Aave_1490 SM00052 Putative diguanylate phosphodiesterase Aave_1490 SM00267 diguanylate cyclase Aave_1493 SM00448 cheY-homologous receiver domain Aave_1493 SM00862 Transcriptional regulatory protein, C terminal Aave_1494 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_1494 SM00387 Histidine kinase-like ATPases Aave_1494 SM00388 His Kinase A (phosphoacceptor) domain Aave_1497 SM00382 ATPases associated with a variety of cellular activities Aave_1510 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_1510 SM00895 Aave_1510 Aave_1530 SM00100 Cyclic nucleotide-monophosphate binding domain Aave_1530 SM00419 helix_turn_helix, cAMP Regulatory protein Aave_1531 SM00729 Elongator protein 3, MiaB family, Radical SAM Aave_1534 SM00052 Putative diguanylate phosphodiesterase Aave_1534 SM00091 PAS domain Aave_1534 SM00267 diguanylate cyclase Aave_1542 SM00382 ATPases associated with a variety of cellular activities Aave_1562 SM00478 endonuclease III Aave_1562 SM00525 Aave_1562 Aave_1567 SM00487 DEAD-like helicases superfamily Aave_1567 SM00490 helicase superfamily c-terminal domain Aave_1577 SM00421 helix_turn_helix, Lux Regulon Aave_1580 SM00487 DEAD-like helicases superfamily Aave_1580 SM00490 helicase superfamily c-terminal domain Aave_1580 SM00982 Aave_1580 Aave_1580 SM01058 CarD-like/TRCF domain Aave_1583 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_1583 SM00387 Histidine kinase-like ATPases Aave_1583 SM00388 His Kinase A (phosphoacceptor) domain Aave_1584 SM00448 cheY-homologous receiver domain Aave_1584 SM00862 Transcriptional regulatory protein, C terminal Aave_1588 SM00954 Region found in RelA / SpoT proteins Aave_1601 SM00470 ParB-like nuclease domain Aave_1607 SM00530 Helix-turn-helix XRE-family like proteins Aave_1644 SM00857 Resolvase, N terminal domain Aave_1645 SM00729 Elongator protein 3, MiaB family, Radical SAM Aave_1648 SM00841 Elongation factor P, C-terminal Aave_1648 SM01185 Aave_1648 Aave_1657 SM00382 ATPases associated with a variety of cellular activities Aave_1664 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Aave_1664 SM00465 GIY-YIG type nucleases (URI domain) Aave_1666 SM00411 bacterial (prokaryotic) histone like domain Aave_1686 SM00530 Helix-turn-helix XRE-family like proteins Aave_1687 SM00530 Helix-turn-helix XRE-family like proteins Aave_1750 SM00530 Helix-turn-helix XRE-family like proteins Aave_1797 SM00631 Aave_1797 Aave_1798 SM00487 DEAD-like helicases superfamily Aave_1798 SM00490 helicase superfamily c-terminal domain Aave_1801 SM00382 ATPases associated with a variety of cellular activities Aave_1806 SM00849 Metallo-beta-lactamase superfamily Aave_1816 SM00422 helix_turn_helix, mercury resistance Aave_1832 SM00935 Outer membrane protein (OmpH-like) Aave_1847 SM00937 Aave_1847 Aave_1848 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Aave_1848 SM01232 Aave_1848 Aave_1851 SM01207 Aave_1851 Aave_1872 SM00986 Uracil DNA glycosylase superfamily Aave_1872 SM00987 UreE urease accessory protein, C-terminal domain Aave_1873 SM00382 ATPases associated with a variety of cellular activities Aave_1874 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_1874 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_1877 SM00382 ATPases associated with a variety of cellular activities Aave_1878 SM00382 ATPases associated with a variety of cellular activities Aave_1893 SM00479 Aave_1893 Aave_1894 SM00487 DEAD-like helicases superfamily Aave_1894 SM00490 helicase superfamily c-terminal domain Aave_1895 SM00267 diguanylate cyclase Aave_1900 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_1900 SM00387 Histidine kinase-like ATPases Aave_1900 SM00388 His Kinase A (phosphoacceptor) domain Aave_1900 SM00448 cheY-homologous receiver domain Aave_1901 SM00382 ATPases associated with a variety of cellular activities Aave_1901 SM00448 cheY-homologous receiver domain Aave_1911 SM01240 Aave_1911 Aave_1930 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Aave_1930 SM00474 3'-5' exonuclease Aave_1930 SM00475 5'-3' exonuclease Aave_1930 SM00482 DNA polymerase A domain Aave_1937 SM00062 Bacterial periplasmic substrate-binding proteins Aave_1947 SM00448 cheY-homologous receiver domain Aave_1947 SM00850 LytTr DNA-binding domain Aave_1953 SM01359 Aave_1953 Aave_1953 SM01360 Aave_1953 Aave_1956 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_1956 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_1960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_1960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_1966 SM00342 helix_turn_helix, arabinose operon control protein Aave_1995 SM00382 ATPases associated with a variety of cellular activities Aave_2010 SM00450 Rhodanese Homology Domain Aave_2015 SM00861 Transketolase, pyrimidine binding domain Aave_2022 SM00642 Alpha-amylase domain Aave_2023 SM00642 Alpha-amylase domain Aave_2024 SM00642 Alpha-amylase domain Aave_2026 SM00382 ATPases associated with a variety of cellular activities Aave_2035 SM00448 cheY-homologous receiver domain Aave_2035 SM00850 LytTr DNA-binding domain Aave_2036 SM00387 Histidine kinase-like ATPases Aave_2043 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_2043 SM00091 PAS domain Aave_2043 SM00267 diguanylate cyclase Aave_2052 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Aave_2052 SM00534 ATPase domain of DNA mismatch repair MUTS family Aave_2063 SM00073 Histidine Phosphotransfer domain Aave_2063 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_2063 SM00091 PAS domain Aave_2063 SM00387 Histidine kinase-like ATPases Aave_2063 SM00388 His Kinase A (phosphoacceptor) domain Aave_2063 SM00448 cheY-homologous receiver domain Aave_2064 SM00448 cheY-homologous receiver domain Aave_2064 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Aave_2066 SM00382 ATPases associated with a variety of cellular activities Aave_2073 SM00382 ATPases associated with a variety of cellular activities Aave_2077 SM00852 Probable molybdopterin binding domain Aave_2082 SM00858 Aave_2082 Aave_2087 SM01329 Aave_2087 Aave_2096 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Aave_2100 SM00947 Carbonic anhydrase Aave_2102 SM00637 Aave_2102 Aave_2105 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Aave_2108 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_2113 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_2113 SM00091 PAS domain Aave_2113 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_2114 SM00116 Domain in cystathionine beta-synthase and other proteins. Aave_2118 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_2118 SM00387 Histidine kinase-like ATPases Aave_2121 SM00448 cheY-homologous receiver domain Aave_2141 SM00360 RNA recognition motif Aave_2145 SM00382 ATPases associated with a variety of cellular activities Aave_2149 SM01012 Aave_2149 Aave_2161 SM00460 Transglutaminase/protease-like homologues Aave_2163 SM00382 ATPases associated with a variety of cellular activities Aave_2168 SM00893 Electron transfer flavoprotein domain Aave_2169 SM00893 Electron transfer flavoprotein domain Aave_2176 SM00729 Elongator protein 3, MiaB family, Radical SAM Aave_2180 SM00344 helix_turn_helix ASNC type Aave_2190 SM00382 ATPases associated with a variety of cellular activities Aave_2191 SM01329 Aave_2191 Aave_2195 SM00829 Enoylreductase Aave_2196 SM00342 helix_turn_helix, arabinose operon control protein Aave_2205 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_2205 SM00866 Aave_2205 Aave_2212 SM00530 Helix-turn-helix XRE-family like proteins Aave_2217 SM00448 cheY-homologous receiver domain Aave_2218 SM00387 Histidine kinase-like ATPases Aave_2236 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_2236 SM00091 PAS domain Aave_2236 SM00387 Histidine kinase-like ATPases Aave_2236 SM00388 His Kinase A (phosphoacceptor) domain Aave_2237 SM00062 Bacterial periplasmic substrate-binding proteins Aave_2238 SM00448 cheY-homologous receiver domain Aave_2239 SM00448 cheY-homologous receiver domain Aave_2240 SM00448 cheY-homologous receiver domain Aave_2241 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_2241 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_2244 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Aave_2247 SM01130 Aave_2247 Aave_2251 SM00382 ATPases associated with a variety of cellular activities Aave_2253 SM00382 ATPases associated with a variety of cellular activities Aave_2267 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Aave_2267 SM00387 Histidine kinase-like ATPases Aave_2267 SM00388 His Kinase A (phosphoacceptor) domain Aave_2272 SM00346 helix_turn_helix isocitrate lyase regulation Aave_2276 SM00422 helix_turn_helix, mercury resistance Aave_2284 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_2286 SM00671 Sel1-like repeats. Aave_2290 SM00155 Phospholipase D. Active site motifs. Aave_2309 SM00344 helix_turn_helix ASNC type Aave_2319 SM00028 Tetratricopeptide repeats Aave_2320 SM00840 Aave_2320 Aave_2321 SM00478 endonuclease III Aave_2335 SM00530 Helix-turn-helix XRE-family like proteins Aave_2396 SM00857 Resolvase, N terminal domain Aave_2399 SM00857 Resolvase, N terminal domain Aave_2417 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_2417 SM00091 PAS domain Aave_2417 SM00138 Methyltransferase, chemotaxis proteins Aave_2417 SM00387 Histidine kinase-like ATPases Aave_2417 SM00388 His Kinase A (phosphoacceptor) domain Aave_2417 SM00448 cheY-homologous receiver domain Aave_2419 SM00363 S4 RNA-binding domain Aave_2436 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_2437 SM00729 Elongator protein 3, MiaB family, Radical SAM Aave_2441 SM00487 DEAD-like helicases superfamily Aave_2441 SM00490 helicase superfamily c-terminal domain Aave_2449 SM00479 Aave_2449 Aave_2460 SM00421 helix_turn_helix, Lux Regulon Aave_2460 SM00448 cheY-homologous receiver domain Aave_2461 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_2461 SM00091 PAS domain Aave_2461 SM00387 Histidine kinase-like ATPases Aave_2461 SM00388 His Kinase A (phosphoacceptor) domain Aave_2470 SM00062 Bacterial periplasmic substrate-binding proteins Aave_2471 SM00364 Leucine-rich repeats, bacterial type Aave_2471 SM00369 Leucine-rich repeats, typical (most populated) subfamily Aave_2479 SM00822 Aave_2479 Aave_2480 SM00382 ATPases associated with a variety of cellular activities Aave_2486 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_2486 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_2489 SM00954 Region found in RelA / SpoT proteins Aave_2490 SM00052 Putative diguanylate phosphodiesterase Aave_2490 SM00267 diguanylate cyclase Aave_2490 SM01079 Aave_2490 Aave_2496 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_2496 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_2497 SM00421 helix_turn_helix, Lux Regulon Aave_2497 SM00448 cheY-homologous receiver domain Aave_2507 SM00091 PAS domain Aave_2507 SM00267 diguanylate cyclase Aave_2508 SM00091 PAS domain Aave_2509 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_2509 SM00895 Aave_2509 Aave_2515 SM00878 Biotin carboxylase C-terminal domain Aave_2518 SM00729 Elongator protein 3, MiaB family, Radical SAM Aave_2518 SM00876 Biotin and Thiamin Synthesis associated domain Aave_2520 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen Aave_2525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_2525 SM00387 Histidine kinase-like ATPases Aave_2525 SM00388 His Kinase A (phosphoacceptor) domain Aave_2526 SM00448 cheY-homologous receiver domain Aave_2526 SM00862 Transcriptional regulatory protein, C terminal Aave_2532 SM00226 Low molecular weight phosphatase family Aave_2535 SM00091 PAS domain Aave_2535 SM00387 Histidine kinase-like ATPases Aave_2535 SM00388 His Kinase A (phosphoacceptor) domain Aave_2535 SM00448 cheY-homologous receiver domain Aave_2536 SM00382 ATPases associated with a variety of cellular activities Aave_2536 SM00930 Aave_2536 Aave_2538 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_2548 SM00382 ATPases associated with a variety of cellular activities Aave_2550 SM00450 Rhodanese Homology Domain Aave_2556 SM00382 ATPases associated with a variety of cellular activities Aave_2556 SM00487 DEAD-like helicases superfamily Aave_2556 SM00490 helicase superfamily c-terminal domain Aave_2556 SM00847 Helicase associated domain (HA2) Add an annotation Aave_2559 SM00870 Aave_2559 Aave_2572 SM01329 Aave_2572 Aave_2579 SM00422 helix_turn_helix, mercury resistance Aave_2580 SM00528 Domain in histone-like proteins of HNS family Aave_2587 SM01130 Aave_2587 Aave_2589 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_2589 SM00895 Aave_2589 Aave_2595 SM00858 Aave_2595 Aave_2610 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Aave_2611 SM00851 MGS-like domain Aave_2611 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Aave_2615 SM01103 Aave_2615 Aave_2617 SM00382 ATPases associated with a variety of cellular activities Aave_2620 SM00052 Putative diguanylate phosphodiesterase Aave_2620 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_2620 SM00091 PAS domain Aave_2620 SM00267 diguanylate cyclase Aave_2623 SM00855 Phosphoglycerate mutase family Aave_2629 SM00382 ATPases associated with a variety of cellular activities Aave_2631 SM00448 cheY-homologous receiver domain Aave_2631 SM00862 Transcriptional regulatory protein, C terminal Aave_2632 SM00091 PAS domain Aave_2632 SM00387 Histidine kinase-like ATPases Aave_2632 SM00388 His Kinase A (phosphoacceptor) domain Aave_2638 SM00357 Cold shock protein domain Aave_2638 SM00382 ATPases associated with a variety of cellular activities Aave_2638 SM00959 Rho termination factor, N-terminal domain Aave_2643 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_2643 SM01049 Aave_2643 Aave_2644 SM00382 ATPases associated with a variety of cellular activities Aave_2646 SM00493 Aave_2646 Aave_2651 SM00849 Metallo-beta-lactamase superfamily Aave_2656 SM00852 Probable molybdopterin binding domain Aave_2659 SM00729 Elongator protein 3, MiaB family, Radical SAM Aave_2665 SM00100 Cyclic nucleotide-monophosphate binding domain Aave_2665 SM00419 helix_turn_helix, cAMP Regulatory protein Aave_2672 SM00481 DNA polymerase alpha chain like domain Aave_2686 SM00487 DEAD-like helicases superfamily Aave_2686 SM00490 helicase superfamily c-terminal domain Aave_2701 SM00487 DEAD-like helicases superfamily Aave_2702 SM00857 Resolvase, N terminal domain Aave_2704 SM00670 Large family of predicted nucleotide-binding domains Aave_2732 SM00481 DNA polymerase alpha chain like domain Aave_2772 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Aave_2783 SM00382 ATPases associated with a variety of cellular activities Aave_2787 SM00729 Elongator protein 3, MiaB family, Radical SAM Aave_2790 SM00822 Aave_2790 Aave_2798 SM00354 helix_turn _helix lactose operon repressor Aave_2812 SM00382 ATPases associated with a variety of cellular activities Aave_2817 SM00450 Rhodanese Homology Domain Aave_2819 SM00881 CoA binding domain Aave_2823 SM00342 helix_turn_helix, arabinose operon control protein Aave_2823 SM00478 endonuclease III Aave_2823 SM01009 AlkA N-terminal domain Aave_2826 SM00052 Putative diguanylate phosphodiesterase Aave_2826 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_2826 SM00091 PAS domain Aave_2826 SM00267 diguanylate cyclase Aave_2833 SM00487 DEAD-like helicases superfamily Aave_2833 SM00490 helicase superfamily c-terminal domain Aave_2836 SM00062 Bacterial periplasmic substrate-binding proteins Aave_2841 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Aave_2841 SM00292 breast cancer carboxy-terminal domain Aave_2841 SM00532 Ligase N family Aave_2842 SM00771 ZipA, C-terminal domain (FtsZ-binding) Aave_2843 SM00968 SMC proteins Flexible Hinge Domain Aave_2846 SM00052 Putative diguanylate phosphodiesterase Aave_2846 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_2846 SM00091 PAS domain Aave_2846 SM00267 diguanylate cyclase Aave_2846 SM01079 Aave_2846 Aave_2848 SM00382 ATPases associated with a variety of cellular activities Aave_2849 SM01266 Aave_2849 Aave_2852 SM00422 helix_turn_helix, mercury resistance Aave_2853 SM00411 bacterial (prokaryotic) histone like domain Aave_2854 SM00873 B3/4 domain Aave_2854 SM00874 tRNA synthetase B5 domain Aave_2854 SM00896 Ferredoxin-fold anticodon binding domain Aave_2859 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Aave_2863 SM00344 helix_turn_helix ASNC type Aave_2865 SM00151 SWI complex, BAF60b domains Aave_2871 SM00829 Enoylreductase Aave_2873 SM00822 Aave_2873 Aave_2925 SM00052 Putative diguanylate phosphodiesterase Aave_2925 SM00267 diguanylate cyclase Aave_2926 SM00267 diguanylate cyclase Aave_2929 SM00331 Sigma factor PP2C-like phosphatases Aave_2930 SM00382 ATPases associated with a variety of cellular activities Aave_2931 SM00382 ATPases associated with a variety of cellular activities Aave_2942 SM00670 Large family of predicted nucleotide-binding domains Aave_2944 SM00857 Resolvase, N terminal domain Aave_2957 SM00014 Acid phosphatase homologues Aave_2966 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_2966 SM00866 Aave_2966 Aave_2967 SM00382 ATPases associated with a variety of cellular activities Aave_2973 SM00331 Sigma factor PP2C-like phosphatases Aave_2974 SM00387 Histidine kinase-like ATPases Aave_2974 SM00388 His Kinase A (phosphoacceptor) domain Aave_2975 SM00091 PAS domain Aave_2975 SM00387 Histidine kinase-like ATPases Aave_2975 SM00388 His Kinase A (phosphoacceptor) domain Aave_2975 SM00448 cheY-homologous receiver domain Aave_2976 SM00091 PAS domain Aave_2976 SM00387 Histidine kinase-like ATPases Aave_2976 SM00388 His Kinase A (phosphoacceptor) domain Aave_2976 SM00448 cheY-homologous receiver domain Aave_2978 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Aave_2980 SM00387 Histidine kinase-like ATPases Aave_2981 SM00448 cheY-homologous receiver domain Aave_2983 SM00642 Alpha-amylase domain Aave_2984 SM00642 Alpha-amylase domain Aave_2985 SM00642 Alpha-amylase domain Aave_2987 SM00822 Aave_2987 Aave_2988 SM00316 Ribosomal protein S1-like RNA-binding domain Aave_2988 SM00357 Cold shock protein domain Aave_2988 SM00955 Aave_2988 Aave_2996 SM00116 Domain in cystathionine beta-synthase and other proteins. Aave_3001 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_3001 SM00387 Histidine kinase-like ATPases Aave_3001 SM00388 His Kinase A (phosphoacceptor) domain Aave_3002 SM00448 cheY-homologous receiver domain Aave_3002 SM00862 Transcriptional regulatory protein, C terminal Aave_3012 SM00448 cheY-homologous receiver domain Aave_3012 SM00862 Transcriptional regulatory protein, C terminal Aave_3013 SM00387 Histidine kinase-like ATPases Aave_3013 SM00388 His Kinase A (phosphoacceptor) domain Aave_3018 SM00967 RNA 2'-O ribose methyltransferase substrate binding Aave_3019 SM00382 ATPases associated with a variety of cellular activities Aave_3024 SM00267 diguanylate cyclase Aave_3026 SM00450 Rhodanese Homology Domain Aave_3034 SM00267 diguanylate cyclase Aave_3035 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Aave_3041 SM00382 ATPases associated with a variety of cellular activities Aave_3045 SM00062 Bacterial periplasmic substrate-binding proteins Aave_3060 SM00240 Forkhead associated domain Aave_3066 SM00220 Serine/Threonine protein kinases, catalytic domain Aave_3075 SM00100 Cyclic nucleotide-monophosphate binding domain Aave_3075 SM00419 helix_turn_helix, cAMP Regulatory protein Aave_3093 SM00387 Histidine kinase-like ATPases Aave_3093 SM00388 His Kinase A (phosphoacceptor) domain Aave_3096 SM00052 Putative diguanylate phosphodiesterase Aave_3096 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Aave_3099 SM01211 Aave_3099 Aave_3101 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Aave_3106 SM00346 helix_turn_helix isocitrate lyase regulation Aave_3108 SM00917 LeuA allosteric (dimerisation) domain Aave_3119 SM00938 Nitrogen regulatory protein P-II Aave_3125 SM00260 Two component signalling adaptor domain Aave_3126 SM00882 Coenzyme A transferase Aave_3127 SM00882 Coenzyme A transferase Aave_3128 SM00091 PAS domain Aave_3128 SM00421 helix_turn_helix, Lux Regulon Aave_3136 SM00248 ankyrin repeats Aave_3137 SM01060 Aave_3137 Aave_3138 SM00822 Aave_3138 Aave_3143 SM00382 ATPases associated with a variety of cellular activities Aave_3144 SM00344 helix_turn_helix ASNC type Aave_3149 SM00091 PAS domain Aave_3149 SM00387 Histidine kinase-like ATPases Aave_3149 SM00388 His Kinase A (phosphoacceptor) domain Aave_3149 SM00448 cheY-homologous receiver domain Aave_3170 SM00382 ATPases associated with a variety of cellular activities Aave_3171 SM00382 ATPases associated with a variety of cellular activities Aave_3178 SM00347 helix_turn_helix multiple antibiotic resistance protein Aave_3179 SM00822 Aave_3179 Aave_3183 SM00091 PAS domain Aave_3183 SM00387 Histidine kinase-like ATPases Aave_3183 SM00388 His Kinase A (phosphoacceptor) domain Aave_3196 SM00316 Ribosomal protein S1-like RNA-binding domain Aave_3202 SM01209 Aave_3202 Aave_3202 SM01210 Aave_3202 Aave_3205 SM00849 Metallo-beta-lactamase superfamily Aave_3208 SM00346 helix_turn_helix isocitrate lyase regulation Aave_3210 SM00998 Adenylosuccinate lyase C-terminus Aave_3212 SM00450 Rhodanese Homology Domain Aave_3222 SM00862 Transcriptional regulatory protein, C terminal Aave_3228 SM00271 DnaJ molecular chaperone homology domain Aave_3231 SM00829 Enoylreductase Aave_3234 SM00382 ATPases associated with a variety of cellular activities Aave_3236 SM00479 Aave_3236 Aave_3238 SM00382 ATPases associated with a variety of cellular activities Aave_3238 SM01086 C-terminal, D2-small domain, of ClpB protein Aave_3240 SM00481 DNA polymerase alpha chain like domain Aave_3242 SM00487 DEAD-like helicases superfamily Aave_3242 SM00491 Aave_3242 Aave_3243 SM00331 Sigma factor PP2C-like phosphatases Aave_3243 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Aave_3248 SM00861 Transketolase, pyrimidine binding domain Aave_3250 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_3250 SM00091 PAS domain Aave_3250 SM00267 diguanylate cyclase Aave_3251 SM00382 ATPases associated with a variety of cellular activities Aave_3256 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. Aave_3259 SM00244 prohibitin homologues Aave_3274 SM00448 cheY-homologous receiver domain Aave_3274 SM00862 Transcriptional regulatory protein, C terminal Aave_3275 SM00387 Histidine kinase-like ATPases Aave_3275 SM00388 His Kinase A (phosphoacceptor) domain Aave_3280 SM00434 DNA Topoisomerase IV Aave_3282 SM00830 Chorismate mutase type II Aave_3285 SM00316 Ribosomal protein S1-like RNA-binding domain Aave_3286 SM00411 bacterial (prokaryotic) histone like domain Aave_3288 SM00028 Tetratricopeptide repeats Aave_3320 SM00344 helix_turn_helix ASNC type Aave_3325 SM00382 ATPases associated with a variety of cellular activities Aave_3331 SM00346 helix_turn_helix isocitrate lyase regulation Aave_3333 SM00357 Cold shock protein domain Aave_3355 SM00487 DEAD-like helicases superfamily Aave_3357 SM00382 ATPases associated with a variety of cellular activities Aave_3370 SM00116 Domain in cystathionine beta-synthase and other proteins. Aave_3370 SM01240 Aave_3370 Aave_3379 SM01091 Transporter associated domain Aave_3384 SM00316 Ribosomal protein S1-like RNA-binding domain Aave_3384 SM00322 K homology RNA-binding domain Aave_3396 SM00637 Aave_3396 Aave_3398 SM00477 DNA/RNA non-specific endonuclease Aave_3398 SM00892 DNA/RNA non-specific endonuclease Aave_3404 SM00028 Tetratricopeptide repeats Aave_3407 SM00382 ATPases associated with a variety of cellular activities Aave_3408 SM00248 ankyrin repeats Aave_3421 SM00316 Ribosomal protein S1-like RNA-binding domain Aave_3421 SM00732 Likely ribonuclease with RNase H fold. Aave_3426 SM00382 ATPases associated with a variety of cellular activities Aave_3426 SM00843 Aave_3426 Aave_3430 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_3434 SM00656 Aave_3434 Aave_3442 SM00636 Aave_3442 Aave_3443 SM00028 Tetratricopeptide repeats Aave_3444 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_3448 SM00507 HNH nucleases Aave_3449 SM00904 Riboflavin kinase Aave_3453 SM00354 helix_turn _helix lactose operon repressor Aave_3457 SM00382 ATPases associated with a variety of cellular activities Aave_3466 SM00903 Flavin reductase like domain Aave_3468 SM00829 Enoylreductase Aave_3480 SM00860 SMI1 / KNR4 family Aave_3487 SM00052 Putative diguanylate phosphodiesterase Aave_3487 SM00267 diguanylate cyclase Aave_3491 SM00014 Acid phosphatase homologues Aave_3494 SM00357 Cold shock protein domain Aave_3496 SM00382 ATPases associated with a variety of cellular activities Aave_3497 SM00382 ATPases associated with a variety of cellular activities Aave_3502 SM01301 Aave_3502 Aave_3505 SM00867 YceI-like domain Aave_3506 SM00867 YceI-like domain Aave_3510 SM00878 Biotin carboxylase C-terminal domain Aave_3511 SM00796 Allophanate hydrolase subunit 1 Aave_3511 SM00797 Allophanate hydrolase subunit 2 Aave_3515 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_3515 SM00895 Aave_3515 Aave_3518 SM00387 Histidine kinase-like ATPases Aave_3518 SM00388 His Kinase A (phosphoacceptor) domain Aave_3523 SM00052 Putative diguanylate phosphodiesterase Aave_3523 SM00091 PAS domain Aave_3523 SM00267 diguanylate cyclase Aave_3524 SM00421 helix_turn_helix, Lux Regulon Aave_3524 SM00448 cheY-homologous receiver domain Aave_3525 SM00387 Histidine kinase-like ATPases Aave_3525 SM00388 His Kinase A (phosphoacceptor) domain Aave_3525 SM00448 cheY-homologous receiver domain Aave_3531 SM00988 UreE urease accessory protein, N-terminal domain Aave_3536 SM00382 ATPases associated with a variety of cellular activities Aave_3541 SM00387 Histidine kinase-like ATPases Aave_3541 SM00388 His Kinase A (phosphoacceptor) domain Aave_3545 SM00052 Putative diguanylate phosphodiesterase Aave_3546 SM00138 Methyltransferase, chemotaxis proteins Aave_3548 SM00448 cheY-homologous receiver domain Aave_3564 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_3564 SM00091 PAS domain Aave_3564 SM00387 Histidine kinase-like ATPases Aave_3564 SM00388 His Kinase A (phosphoacceptor) domain Aave_3564 SM00448 cheY-homologous receiver domain Aave_3574 SM00822 Aave_3574 Aave_3577 SM00729 Elongator protein 3, MiaB family, Radical SAM Aave_3580 SM00331 Sigma factor PP2C-like phosphatases Aave_3580 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Aave_3581 SM00220 Serine/Threonine protein kinases, catalytic domain Aave_3583 SM00072 Guanylate kinase homologues. Aave_3584 SM01409 Aave_3584 Aave_3585 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Aave_3585 SM00954 Region found in RelA / SpoT proteins Aave_3590 SM00633 Glycosyl hydrolase family 10 Aave_3591 SM00421 helix_turn_helix, Lux Regulon Aave_3591 SM00448 cheY-homologous receiver domain Aave_3594 SM00857 Resolvase, N terminal domain Aave_3604 SM00478 endonuclease III Aave_3606 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Aave_3606 SM01232 Aave_3606 Aave_3607 SM00028 Tetratricopeptide repeats Aave_3610 SM01400 Aave_3610 Aave_3616 SM00382 ATPases associated with a variety of cellular activities Aave_3617 SM00382 ATPases associated with a variety of cellular activities Aave_3623 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Aave_3625 SM00354 helix_turn _helix lactose operon repressor Aave_3630 SM01034 Sensors of blue-light using FAD Aave_3634 SM00028 Tetratricopeptide repeats Aave_3634 SM00448 cheY-homologous receiver domain Aave_3639 SM00834 Putative regulatory protein Aave_3643 SM00978 Aave_3643 Aave_3646 SM00267 diguanylate cyclase Aave_3653 SM00382 ATPases associated with a variety of cellular activities Aave_3664 SM00937 Aave_3664 Aave_3667 SM00382 ATPases associated with a variety of cellular activities Aave_3668 SM01091 Transporter associated domain Aave_3672 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Aave_3680 SM00382 ATPases associated with a variety of cellular activities Aave_3689 SM00957 SecA DEAD-like domain Aave_3689 SM00958 SecA preprotein cross-linking domain Aave_3699 SM00382 ATPases associated with a variety of cellular activities Aave_3707 SM00481 DNA polymerase alpha chain like domain Aave_3724 SM00382 ATPases associated with a variety of cellular activities Aave_3727 SM01006 Siderophore biosynthesis protein domain Aave_3729 SM00823 Phosphopantetheine attachment site Aave_3729 SM00824 Thioesterase Aave_3730 SM00823 Phosphopantetheine attachment site Aave_3731 SM00823 Phosphopantetheine attachment site Aave_3732 SM00822 Aave_3732 Aave_3732 SM00823 Phosphopantetheine attachment site Aave_3732 SM00825 Beta-ketoacyl synthase Aave_3732 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Aave_3733 SM00823 Phosphopantetheine attachment site Aave_3736 SM00923 MbtH-like protein Aave_3756 SM00062 Bacterial periplasmic substrate-binding proteins Aave_3762 SM00052 Putative diguanylate phosphodiesterase Aave_3762 SM00091 PAS domain Aave_3762 SM00267 diguanylate cyclase Aave_3769 SM00116 Domain in cystathionine beta-synthase and other proteins. Aave_3770 SM00116 Domain in cystathionine beta-synthase and other proteins. Aave_3770 SM01091 Transporter associated domain Aave_3777 SM00463 Small MutS-related domain Aave_3778 SM00387 Histidine kinase-like ATPases Aave_3779 SM00448 cheY-homologous receiver domain Aave_3779 SM00862 Transcriptional regulatory protein, C terminal Aave_3810 SM00421 helix_turn_helix, Lux Regulon Aave_3813 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_3813 SM00895 Aave_3813 Aave_3817 SM00382 ATPases associated with a variety of cellular activities Aave_3818 SM00382 ATPases associated with a variety of cellular activities Aave_3828 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_3828 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_3857 SM00450 Rhodanese Homology Domain Aave_3858 SM00855 Phosphoglycerate mutase family Aave_3859 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Aave_3859 SM00245 tail specific protease Aave_3861 SM00448 cheY-homologous receiver domain Aave_3862 SM00421 helix_turn_helix, Lux Regulon Aave_3862 SM00448 cheY-homologous receiver domain Aave_3863 SM00387 Histidine kinase-like ATPases Aave_3867 SM00749 bacterial OsmY and nodulation domain Aave_3874 SM00382 ATPases associated with a variety of cellular activities Aave_3874 SM00962 SRP54-type protein, GTPase domain Aave_3874 SM00963 SRP54-type protein, helical bundle domain Aave_3880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_3880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_3881 SM00342 helix_turn_helix, arabinose operon control protein Aave_3890 SM00382 ATPases associated with a variety of cellular activities Aave_3897 SM00100 Cyclic nucleotide-monophosphate binding domain Aave_3897 SM00419 helix_turn_helix, cAMP Regulatory protein Aave_3922 SM00347 helix_turn_helix multiple antibiotic resistance protein Aave_3923 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_3923 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_3932 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Aave_3934 SM00347 helix_turn_helix multiple antibiotic resistance protein Aave_3945 SM00882 Coenzyme A transferase Aave_3946 SM00882 Coenzyme A transferase Aave_3947 SM00346 helix_turn_helix isocitrate lyase regulation Aave_3952 SM00382 ATPases associated with a variety of cellular activities Aave_3962 SM00155 Phospholipase D. Active site motifs. Aave_3963 SM00387 Histidine kinase-like ATPases Aave_3963 SM00388 His Kinase A (phosphoacceptor) domain Aave_3964 SM00448 cheY-homologous receiver domain Aave_3964 SM00862 Transcriptional regulatory protein, C terminal Aave_3965 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Aave_3969 SM00342 helix_turn_helix, arabinose operon control protein Aave_3970 SM00487 DEAD-like helicases superfamily Aave_3979 SM00382 ATPases associated with a variety of cellular activities Aave_3981 SM01209 Aave_3981 Aave_3990 SM00460 Transglutaminase/protease-like homologues Aave_3991 SM01060 Aave_3991 Aave_3992 SM00448 cheY-homologous receiver domain Aave_3993 SM00387 Histidine kinase-like ATPases Aave_3993 SM00388 His Kinase A (phosphoacceptor) domain Aave_3993 SM00448 cheY-homologous receiver domain Aave_3995 SM00138 Methyltransferase, chemotaxis proteins Aave_3996 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Aave_3996 SM00387 Histidine kinase-like ATPases Aave_3996 SM00388 His Kinase A (phosphoacceptor) domain Aave_3996 SM00448 cheY-homologous receiver domain Aave_3998 SM00267 diguanylate cyclase Aave_3998 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_4004 SM00382 ATPases associated with a variety of cellular activities Aave_4005 SM00487 DEAD-like helicases superfamily Aave_4005 SM00490 helicase superfamily c-terminal domain Aave_4010 SM01236 Aave_4010 Aave_4012 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Aave_4013 SM01092 CO dehydrogenase flavoprotein C-terminal domain Aave_4030 SM00880 Aave_4030 Aave_4030 SM01118 Aave_4030 Aave_4037 SM00344 helix_turn_helix ASNC type Aave_4038 SM00387 Histidine kinase-like ATPases Aave_4038 SM00388 His Kinase A (phosphoacceptor) domain Aave_4040 SM00100 Cyclic nucleotide-monophosphate binding domain Aave_4040 SM00419 helix_turn_helix, cAMP Regulatory protein Aave_4041 SM01034 Sensors of blue-light using FAD Aave_4060 SM00996 S-adenosyl-L-homocysteine hydrolase Aave_4060 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Aave_4070 SM00382 ATPases associated with a variety of cellular activities Aave_4073 SM00062 Bacterial periplasmic substrate-binding proteins Aave_4074 SM00062 Bacterial periplasmic substrate-binding proteins Aave_4079 SM00382 ATPases associated with a variety of cellular activities Aave_4115 SM00530 Helix-turn-helix XRE-family like proteins Aave_4137 SM00387 Histidine kinase-like ATPases Aave_4137 SM00388 His Kinase A (phosphoacceptor) domain Aave_4138 SM00448 cheY-homologous receiver domain Aave_4138 SM00862 Transcriptional regulatory protein, C terminal Aave_4145 SM00382 ATPases associated with a variety of cellular activities Aave_4160 SM00382 ATPases associated with a variety of cellular activities Aave_4170 SM00257 Lysin motif Aave_4172 SM00450 Rhodanese Homology Domain Aave_4174 SM00563 Phosphate acyltransferases Aave_4180 SM00825 Beta-ketoacyl synthase Aave_4182 SM00870 Aave_4182 Aave_4185 SM00116 Domain in cystathionine beta-synthase and other proteins. Aave_4185 SM01091 Transporter associated domain Aave_4188 SM00344 helix_turn_helix ASNC type Aave_4197 SM00382 ATPases associated with a variety of cellular activities Aave_4199 SM00354 helix_turn _helix lactose operon repressor Aave_4202 SM00849 Metallo-beta-lactamase superfamily Aave_4205 SM00267 diguanylate cyclase Aave_4222 SM00062 Bacterial periplasmic substrate-binding proteins Aave_4226 SM00905 Dihydroneopterin aldolase Aave_4229 SM00421 helix_turn_helix, Lux Regulon Aave_4229 SM00448 cheY-homologous receiver domain Aave_4230 SM00387 Histidine kinase-like ATPases Aave_4230 SM01049 Aave_4230 Aave_4233 SM00855 Phosphoglycerate mutase family Aave_4234 SM01119 Aave_4234 Aave_4237 SM00382 ATPases associated with a variety of cellular activities Aave_4240 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Aave_4245 SM00487 DEAD-like helicases superfamily Aave_4245 SM00490 helicase superfamily c-terminal domain Aave_4247 SM00267 diguanylate cyclase Aave_4253 SM00354 helix_turn _helix lactose operon repressor Aave_4259 SM00382 ATPases associated with a variety of cellular activities Aave_4262 SM00346 helix_turn_helix isocitrate lyase regulation Aave_4263 SM00903 Flavin reductase like domain Aave_4271 SM00347 helix_turn_helix multiple antibiotic resistance protein Aave_4274 SM00220 Serine/Threonine protein kinases, catalytic domain Aave_4276 SM00448 cheY-homologous receiver domain Aave_4276 SM00862 Transcriptional regulatory protein, C terminal Aave_4279 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_4279 SM00387 Histidine kinase-like ATPases Aave_4279 SM00388 His Kinase A (phosphoacceptor) domain Aave_4279 SM00448 cheY-homologous receiver domain Aave_4289 SM00387 Histidine kinase-like ATPases Aave_4291 SM00363 S4 RNA-binding domain Aave_4292 SM00052 Putative diguanylate phosphodiesterase Aave_4292 SM00267 diguanylate cyclase Aave_4292 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_4294 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_4294 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_4295 SM00100 Cyclic nucleotide-monophosphate binding domain Aave_4295 SM00419 helix_turn_helix, cAMP Regulatory protein Aave_4299 SM00155 Phospholipase D. Active site motifs. Aave_4303 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_4303 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_4305 SM01007 Class II Aldolase and Adducin N-terminal domain Aave_4306 SM00893 Electron transfer flavoprotein domain Aave_4307 SM00893 Electron transfer flavoprotein domain Aave_4320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_4320 SM00387 Histidine kinase-like ATPases Aave_4320 SM00388 His Kinase A (phosphoacceptor) domain Aave_4321 SM00448 cheY-homologous receiver domain Aave_4321 SM00862 Transcriptional regulatory protein, C terminal Aave_4324 SM00382 ATPases associated with a variety of cellular activities Aave_4341 SM00382 ATPases associated with a variety of cellular activities Aave_4351 SM00878 Biotin carboxylase C-terminal domain Aave_4356 SM00342 helix_turn_helix, arabinose operon control protein Aave_4361 SM00387 Histidine kinase-like ATPases Aave_4361 SM00388 His Kinase A (phosphoacceptor) domain Aave_4361 SM00448 cheY-homologous receiver domain Aave_4370 SM00947 Carbonic anhydrase Aave_4372 SM00422 helix_turn_helix, mercury resistance Aave_4373 SM00382 ATPases associated with a variety of cellular activities Aave_4374 SM00448 cheY-homologous receiver domain Aave_4376 SM00138 Methyltransferase, chemotaxis proteins Aave_4377 SM00260 Two component signalling adaptor domain Aave_4378 SM00073 Histidine Phosphotransfer domain Aave_4378 SM00260 Two component signalling adaptor domain Aave_4378 SM00387 Histidine kinase-like ATPases Aave_4378 SM01231 Aave_4378 Aave_4379 SM00448 cheY-homologous receiver domain Aave_4381 SM00387 Histidine kinase-like ATPases Aave_4381 SM00448 cheY-homologous receiver domain Aave_4382 SM00421 helix_turn_helix, Lux Regulon Aave_4382 SM00448 cheY-homologous receiver domain Aave_4392 SM00382 ATPases associated with a variety of cellular activities Aave_4410 SM00448 cheY-homologous receiver domain Aave_4414 SM00382 ATPases associated with a variety of cellular activities Aave_4414 SM00962 SRP54-type protein, GTPase domain Aave_4419 SM00858 Aave_4419 Aave_4429 SM00047 Lysozyme subfamily 2 Aave_4434 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_4443 SM00855 Phosphoglycerate mutase family Aave_4446 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_4454 SM00829 Enoylreductase Aave_4455 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Aave_4468 SM00347 helix_turn_helix multiple antibiotic resistance protein Aave_4471 SM00487 DEAD-like helicases superfamily Aave_4471 SM00490 helicase superfamily c-terminal domain Aave_4492 SM00344 helix_turn_helix ASNC type Aave_4495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_4497 SM00563 Phosphate acyltransferases Aave_4499 SM00530 Helix-turn-helix XRE-family like proteins Aave_4508 SM00897 FIST N domain Aave_4508 SM01204 Aave_4508 Aave_4510 SM00411 bacterial (prokaryotic) histone like domain Aave_4515 SM00382 ATPases associated with a variety of cellular activities Aave_4519 SM00530 Helix-turn-helix XRE-family like proteins Aave_4525 SM00448 cheY-homologous receiver domain Aave_4526 SM00091 PAS domain Aave_4526 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_4526 SM00387 Histidine kinase-like ATPases Aave_4526 SM00388 His Kinase A (phosphoacceptor) domain Aave_4530 SM00663 RNA polymerase I subunit A N-terminus Aave_4535 SM00649 Ribosomal protein L11/L12 Aave_4536 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Aave_4536 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Aave_4550 SM00267 diguanylate cyclase Aave_4562 SM01001 AIR carboxylase Aave_4571 SM00986 Uracil DNA glycosylase superfamily Aave_4571 SM00987 UreE urease accessory protein, C-terminal domain Aave_4577 SM00388 His Kinase A (phosphoacceptor) domain Aave_4578 SM00448 cheY-homologous receiver domain Aave_4578 SM00862 Transcriptional regulatory protein, C terminal Aave_4580 SM00014 Acid phosphatase homologues Aave_4582 SM01011 Aminopeptidase P, N-terminal domain Aave_4585 SM00861 Transketolase, pyrimidine binding domain Aave_4588 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Aave_4599 SM00972 Spore Coat Protein U domain Aave_4603 SM00972 Spore Coat Protein U domain Aave_4607 SM00871 Bacterial transcription activator, effector binding domain Aave_4627 SM00151 SWI complex, BAF60b domains Aave_4627 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Aave_4627 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Aave_4627 SM00493 Aave_4627 Aave_4628 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Aave_4628 SM00508 Cysteine-rich motif following a subset of SET domains Aave_4637 SM00387 Histidine kinase-like ATPases Aave_4637 SM00388 His Kinase A (phosphoacceptor) domain Aave_4638 SM00448 cheY-homologous receiver domain Aave_4638 SM00862 Transcriptional regulatory protein, C terminal Aave_4640 SM00382 ATPases associated with a variety of cellular activities Aave_4645 SM01323 Aave_4645 Aave_4647 SM00344 helix_turn_helix ASNC type Aave_4651 SM00925 MltA specific insert domain Aave_4653 SM00421 helix_turn_helix, Lux Regulon Aave_4653 SM00448 cheY-homologous receiver domain Aave_4654 SM00091 PAS domain Aave_4654 SM00387 Histidine kinase-like ATPases Aave_4654 SM00388 His Kinase A (phosphoacceptor) domain Aave_4660 SM00923 MbtH-like protein Aave_4670 SM01322 Aave_4670 Aave_4680 SM00240 Forkhead associated domain Aave_4681 SM00331 Sigma factor PP2C-like phosphatases Aave_4681 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Aave_4683 SM00881 CoA binding domain Aave_4685 SM00859 Semialdehyde dehydrogenase, NAD binding domain Aave_4687 SM00257 Lysin motif Aave_4696 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Aave_4703 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Aave_4703 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_4710 SM00213 Ubiquitin homologues Aave_4718 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Aave_4719 SM00849 Metallo-beta-lactamase superfamily Aave_4720 SM00267 diguanylate cyclase Aave_4730 SM00267 diguanylate cyclase Aave_4730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Aave_4732 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Aave_4732 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Aave_4732 SM00387 Histidine kinase-like ATPases Aave_4732 SM00388 His Kinase A (phosphoacceptor) domain Aave_4732 SM00448 cheY-homologous receiver domain Aave_4748 SM00267 diguanylate cyclase Aave_4749 SM00345 helix_turn_helix gluconate operon transcriptional repressor Aave_4749 SM00895 Aave_4749 Aave_4753 SM00382 ATPases associated with a variety of cellular activities Aave_4754 SM00382 ATPases associated with a variety of cellular activities Aave_4759 SM00919 Malic enzyme, NAD binding domain Aave_4759 SM01274 Aave_4759 Aave_4762 SM00650 Ribosomal RNA adenine dimethylases Aave_4772 SM00342 helix_turn_helix, arabinose operon control protein Aave_4776 SM00267 diguanylate cyclase Aave_4780 SM00360 RNA recognition motif Aave_4781 SM00360 RNA recognition motif Aave_4785 SM00116 Domain in cystathionine beta-synthase and other proteins. Aave_4790 SM00100 Cyclic nucleotide-monophosphate binding domain Aave_4794 SM01234 Aave_4794