CQB05_00085	PWY-1361	benzoyl-CoA degradation I (aerobic)
CQB05_00085	PWY-5109	2-methylbutanoate biosynthesis
CQB05_00085	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CQB05_00085	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CQB05_00085	PWY-5177	glutaryl-CoA degradation
CQB05_00085	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_00085	PWY-6435	4-hydroxybenzoate biosynthesis V
CQB05_00085	PWY-6583	pyruvate fermentation to butanol I
CQB05_00085	PWY-6863	pyruvate fermentation to hexanol
CQB05_00085	PWY-6883	pyruvate fermentation to butanol II
CQB05_00085	PWY-6944	androstenedione degradation
CQB05_00085	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CQB05_00085	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CQB05_00085	PWY-7007	methyl ketone biosynthesis
CQB05_00085	PWY-7046	4-coumarate degradation (anaerobic)
CQB05_00085	PWY-7094	fatty acid salvage
CQB05_00085	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CQB05_00085	PWY-735	jasmonic acid biosynthesis
CQB05_00085	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CQB05_00085	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CQB05_00085	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CQB05_00085	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CQB05_00085	PWY-7726	CQB05_00085
CQB05_00085	PWY-7778	CQB05_00085
CQB05_00085	PWY-7779	CQB05_00085
CQB05_00180	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CQB05_00350	PWY-3941	&beta;-alanine biosynthesis II
CQB05_00350	PWY-5104	L-isoleucine biosynthesis IV
CQB05_00350	PWY-5108	L-isoleucine biosynthesis V
CQB05_00350	PWY-5132	humulone biosynthesis
CQB05_00350	PWY-5133	cohumulone biosynthesis
CQB05_00350	PWY-5747	2-methylcitrate cycle II
CQB05_00350	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CQB05_00350	PWY-7118	chitin degradation to ethanol
CQB05_00350	PWY-7857	CQB05_00350
CQB05_00375	PWY-6749	CMP-legionaminate biosynthesis I
CQB05_00385	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CQB05_00390	PWY-5392	reductive TCA cycle II
CQB05_00390	PWY-5537	pyruvate fermentation to acetate V
CQB05_00390	PWY-5538	pyruvate fermentation to acetate VI
CQB05_00390	PWY-5690	TCA cycle II (plants and fungi)
CQB05_00390	PWY-5913	TCA cycle VI (obligate autotrophs)
CQB05_00390	PWY-6728	methylaspartate cycle
CQB05_00390	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CQB05_00390	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CQB05_00470	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CQB05_00470	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CQB05_00480	PWY-7942	CQB05_00480
CQB05_00500	PWY-5530	sorbitol biosynthesis II
CQB05_00500	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CQB05_00520	PWY-5101	L-isoleucine biosynthesis II
CQB05_00520	PWY-5103	L-isoleucine biosynthesis III
CQB05_00520	PWY-5104	L-isoleucine biosynthesis IV
CQB05_00520	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CQB05_00525	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CQB05_00525	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
CQB05_00525	PWY-7242	D-fructuronate degradation
CQB05_00525	PWY-7310	D-glucosaminate degradation
CQB05_00525	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
CQB05_00535	PWY-5386	methylglyoxal degradation I
CQB05_00595	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CQB05_00595	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CQB05_00595	PWY-6936	seleno-amino acid biosynthesis
CQB05_00595	PWY-702	L-methionine biosynthesis II
CQB05_01150	PWY-6986	alginate degradation
CQB05_01180	PWY-7805	CQB05_01180
CQB05_01180	PWY-7807	CQB05_01180
CQB05_01185	PWY-7805	CQB05_01185
CQB05_01185	PWY-7807	CQB05_01185
CQB05_01215	PWY-6854	ethylene biosynthesis III (microbes)
CQB05_01230	PWY-6823	molybdenum cofactor biosynthesis
CQB05_01235	PWY-5964	guanylyl molybdenum cofactor biosynthesis
CQB05_01235	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
CQB05_01245	PWY-6823	molybdenum cofactor biosynthesis
CQB05_01270	PWY-5386	methylglyoxal degradation I
CQB05_01345	PWY-7980	CQB05_01345
CQB05_01440	PWY-6749	CMP-legionaminate biosynthesis I
CQB05_01445	PWY-6614	tetrahydrofolate biosynthesis
CQB05_01480	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_01480	PWY-5686	UMP biosynthesis
CQB05_01480	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CQB05_01480	PWY-7790	CQB05_01480
CQB05_01480	PWY-7791	CQB05_01480
CQB05_01485	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_01485	PWY-5686	UMP biosynthesis
CQB05_01485	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CQB05_01485	PWY-7790	CQB05_01485
CQB05_01485	PWY-7791	CQB05_01485
CQB05_01515	PWY-5642	2,4-dinitrotoluene degradation
CQB05_01540	PWY-6854	ethylene biosynthesis III (microbes)
CQB05_01560	PWY-6497	D-galactarate degradation II
CQB05_01600	PWY-6486	D-galacturonate degradation II
CQB05_01600	PWY-6497	D-galactarate degradation II
CQB05_01600	PWY-6499	D-glucarate degradation II
CQB05_01600	PWY-6501	D-glucuronate degradation II
CQB05_01675	PWY-5913	TCA cycle VI (obligate autotrophs)
CQB05_01675	PWY-6549	L-glutamine biosynthesis III
CQB05_01675	PWY-6728	methylaspartate cycle
CQB05_01675	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CQB05_01675	PWY-7124	ethylene biosynthesis V (engineered)
CQB05_01675	PWY-7254	TCA cycle VII (acetate-producers)
CQB05_01675	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CQB05_01695	PWY-6854	ethylene biosynthesis III (microbes)
CQB05_01725	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CQB05_01730	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CQB05_01770	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_01945	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CQB05_01970	PWY-4381	fatty acid biosynthesis initiation I
CQB05_01970	PWY-5743	3-hydroxypropanoate cycle
CQB05_01970	PWY-5744	glyoxylate assimilation
CQB05_01970	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_01970	PWY-6722	candicidin biosynthesis
CQB05_02140	PWY-5676	acetyl-CoA fermentation to butanoate II
CQB05_02140	PWY-5741	ethylmalonyl-CoA pathway
CQB05_02140	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CQB05_02140	PWY-7948	CQB05_02140
CQB05_02190	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_02190	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CQB05_02190	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CQB05_02190	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_02220	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CQB05_02220	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CQB05_02230	PWY-6891	thiazole biosynthesis II (Bacillus)
CQB05_02230	PWY-6892	thiazole biosynthesis I (E. coli)
CQB05_02230	PWY-7560	methylerythritol phosphate pathway II
CQB05_02245	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CQB05_02245	PWY-2201	folate transformations I
CQB05_02245	PWY-3841	folate transformations II
CQB05_02245	PWY-5030	L-histidine degradation III
CQB05_02245	PWY-5497	purine nucleobases degradation II (anaerobic)
CQB05_02245	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CQB05_02245	PWY-7909	CQB05_02245
CQB05_02260	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CQB05_02260	PWY-5723	Rubisco shunt
CQB05_02265	PWY-5686	UMP biosynthesis
CQB05_02335	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CQB05_02350	PWY-5913	TCA cycle VI (obligate autotrophs)
CQB05_02350	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CQB05_02350	PWY-6638	sulfolactate degradation III
CQB05_02350	PWY-6642	(<i>R</i>)-cysteate degradation
CQB05_02350	PWY-6643	coenzyme M biosynthesis II
CQB05_02350	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CQB05_02350	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CQB05_02350	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CQB05_02405	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CQB05_02945	PWY-2941	L-lysine biosynthesis II
CQB05_02945	PWY-2942	L-lysine biosynthesis III
CQB05_02945	PWY-5097	L-lysine biosynthesis VI
CQB05_02945	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
CQB05_02945	PWY-6559	spermidine biosynthesis II
CQB05_02945	PWY-6562	norspermidine biosynthesis
CQB05_02945	PWY-7153	grixazone biosynthesis
CQB05_02945	PWY-7977	CQB05_02945
CQB05_02955	PWY-4381	fatty acid biosynthesis initiation I
CQB05_02955	PWY-5743	3-hydroxypropanoate cycle
CQB05_02955	PWY-5744	glyoxylate assimilation
CQB05_02955	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_02955	PWY-6722	candicidin biosynthesis
CQB05_03000	PWY-4041	&gamma;-glutamyl cycle
CQB05_03000	PWY-4061	glutathione-mediated detoxification I
CQB05_03000	PWY-5826	hypoglycin biosynthesis
CQB05_03000	PWY-6842	glutathione-mediated detoxification II
CQB05_03000	PWY-7112	4-hydroxy-2-nonenal detoxification
CQB05_03000	PWY-7559	glutathione degradation (DUG pathway - yeast)
CQB05_03055	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CQB05_03055	PWY-6416	quinate degradation II
CQB05_03055	PWY-6707	gallate biosynthesis
CQB05_03260	PWY-6840	homoglutathione biosynthesis
CQB05_03260	PWY-7255	ergothioneine biosynthesis I (bacteria)
CQB05_03325	PWY-5101	L-isoleucine biosynthesis II
CQB05_03325	PWY-5103	L-isoleucine biosynthesis III
CQB05_03325	PWY-5104	L-isoleucine biosynthesis IV
CQB05_03325	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CQB05_03335	PWY-7130	L-glucose degradation
CQB05_03340	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CQB05_03340	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
CQB05_03340	PWY-7242	D-fructuronate degradation
CQB05_03340	PWY-7310	D-glucosaminate degradation
CQB05_03340	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
CQB05_03410	PWY-6167	flavin biosynthesis II (archaea)
CQB05_03410	PWY-6168	flavin biosynthesis III (fungi)
CQB05_03455	PWY-3781	aerobic respiration I (cytochrome c)
CQB05_03455	PWY-4521	arsenite oxidation I (respiratory)
CQB05_03455	PWY-6692	Fe(II) oxidation
CQB05_03455	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CQB05_03455	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
CQB05_03515	PWY-5747	2-methylcitrate cycle II
CQB05_03535	PWY-1622	formaldehyde assimilation I (serine pathway)
CQB05_03535	PWY-5392	reductive TCA cycle II
CQB05_03535	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CQB05_03535	PWY-5690	TCA cycle II (plants and fungi)
CQB05_03535	PWY-5913	TCA cycle VI (obligate autotrophs)
CQB05_03535	PWY-6728	methylaspartate cycle
CQB05_03535	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CQB05_03535	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CQB05_03535	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CQB05_03555	PWY-3781	aerobic respiration I (cytochrome c)
CQB05_03555	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CQB05_03555	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CQB05_03555	PWY-5690	TCA cycle II (plants and fungi)
CQB05_03555	PWY-6728	methylaspartate cycle
CQB05_03555	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CQB05_03555	PWY-7254	TCA cycle VII (acetate-producers)
CQB05_03555	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CQB05_03560	PWY-3781	aerobic respiration I (cytochrome c)
CQB05_03560	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CQB05_03560	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CQB05_03560	PWY-5690	TCA cycle II (plants and fungi)
CQB05_03560	PWY-6728	methylaspartate cycle
CQB05_03560	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CQB05_03560	PWY-7254	TCA cycle VII (acetate-producers)
CQB05_03560	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CQB05_03590	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CQB05_03590	PWY-3162	L-tryptophan degradation V (side chain pathway)
CQB05_03590	PWY-5057	L-valine degradation II
CQB05_03590	PWY-5076	L-leucine degradation III
CQB05_03590	PWY-5078	L-isoleucine degradation II
CQB05_03590	PWY-5079	L-phenylalanine degradation III
CQB05_03590	PWY-5082	L-methionine degradation III
CQB05_03590	PWY-5480	pyruvate fermentation to ethanol I
CQB05_03590	PWY-5486	pyruvate fermentation to ethanol II
CQB05_03590	PWY-5751	phenylethanol biosynthesis
CQB05_03590	PWY-6313	serotonin degradation
CQB05_03590	PWY-6333	acetaldehyde biosynthesis I
CQB05_03590	PWY-6342	noradrenaline and adrenaline degradation
CQB05_03590	PWY-6587	pyruvate fermentation to ethanol III
CQB05_03590	PWY-6802	salidroside biosynthesis
CQB05_03590	PWY-6871	3-methylbutanol biosynthesis
CQB05_03590	PWY-7013	L-1,2-propanediol degradation
CQB05_03590	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CQB05_03590	PWY-7118	chitin degradation to ethanol
CQB05_03590	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CQB05_03590	PWY-7798	CQB05_03590
CQB05_03595	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CQB05_03640	PWY-7425	2-chloroacrylate degradation I
CQB05_03650	PWY-5692	allantoin degradation to glyoxylate II
CQB05_03650	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
CQB05_03710	PWY-723	alkylnitronates degradation
CQB05_03975	PWY-4381	fatty acid biosynthesis initiation I
CQB05_03975	PWY-5743	3-hydroxypropanoate cycle
CQB05_03975	PWY-5744	glyoxylate assimilation
CQB05_03975	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_03975	PWY-6722	candicidin biosynthesis
CQB05_04020	PWY-6683	sulfate reduction III (assimilatory)
CQB05_04040	PWY-5194	siroheme biosynthesis
CQB05_04040	PWY-5196	factor 430 biosynthesis
CQB05_04040	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CQB05_04055	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CQB05_04055	PWY-5743	3-hydroxypropanoate cycle
CQB05_04055	PWY-5744	glyoxylate assimilation
CQB05_04055	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_04055	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CQB05_04055	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CQB05_04055	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CQB05_04170	PWY-6936	seleno-amino acid biosynthesis
CQB05_04170	PWY-7274	D-cycloserine biosynthesis
CQB05_04170	PWY-7870	CQB05_04170
CQB05_04200	PWY-2301	<i>myo</i>-inositol biosynthesis
CQB05_04200	PWY-4702	phytate degradation I
CQB05_04200	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
CQB05_04295	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CQB05_04295	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CQB05_04295	PWY-5989	stearate biosynthesis II (bacteria and plants)
CQB05_04295	PWY-6113	superpathway of mycolate biosynthesis
CQB05_04295	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CQB05_04295	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CQB05_04295	PWY-7663	gondoate biosynthesis (anaerobic)
CQB05_04295	PWY-7664	oleate biosynthesis IV (anaerobic)
CQB05_04295	PWY-7858	CQB05_04295
CQB05_04295	PWYG-321	mycolate biosynthesis
CQB05_04335	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CQB05_04425	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CQB05_04425	PWY-622	starch biosynthesis
CQB05_04425	PWY-7900	CQB05_04425
CQB05_04430	PWY-7900	CQB05_04430
CQB05_04435	PWY-2622	trehalose biosynthesis IV
CQB05_04435	PWY-7900	CQB05_04435
CQB05_04470	PWY-6891	thiazole biosynthesis II (Bacillus)
CQB05_04470	PWY-6892	thiazole biosynthesis I (E. coli)
CQB05_04470	PWY-7560	methylerythritol phosphate pathway II
CQB05_04545	PWY-1622	formaldehyde assimilation I (serine pathway)
CQB05_04545	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CQB05_04545	PWY-5913	TCA cycle VI (obligate autotrophs)
CQB05_04545	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CQB05_04545	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
CQB05_04545	PWY-6549	L-glutamine biosynthesis III
CQB05_04545	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CQB05_04545	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CQB05_04545	PWY-7124	ethylene biosynthesis V (engineered)
CQB05_04550	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CQB05_04550	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CQB05_04555	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CQB05_04555	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CQB05_04590	PWY-3801	sucrose degradation II (sucrose synthase)
CQB05_04590	PWY-6527	stachyose degradation
CQB05_04590	PWY-7238	sucrose biosynthesis II
CQB05_04590	PWY-7343	UDP-glucose biosynthesis
CQB05_04590	PWY-7817	CQB05_04590
CQB05_04610	PWY-6936	seleno-amino acid biosynthesis
CQB05_04680	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CQB05_04680	PWY-6148	tetrahydromethanopterin biosynthesis
CQB05_04680	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CQB05_04680	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CQB05_04680	PWY-7852	CQB05_04680
CQB05_04680	PWY-7853	CQB05_04680
CQB05_04700	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CQB05_04700	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CQB05_04700	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CQB05_04765	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_04765	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CQB05_04765	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CQB05_04765	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_04805	PWY-4983	L-citrulline-nitric oxide cycle
CQB05_04805	PWY-4984	urea cycle
CQB05_04805	PWY-5	canavanine biosynthesis
CQB05_04805	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_04805	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CQB05_04825	PWY-4983	L-citrulline-nitric oxide cycle
CQB05_04825	PWY-4984	urea cycle
CQB05_04825	PWY-5	canavanine biosynthesis
CQB05_04825	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_04825	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CQB05_04910	PWY-702	L-methionine biosynthesis II
CQB05_05100	PWY-7158	L-phenylalanine degradation V
CQB05_05125	PWY-6829	tRNA methylation (yeast)
CQB05_05125	PWY-7285	methylwyosine biosynthesis
CQB05_05125	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CQB05_05270	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CQB05_05270	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CQB05_05295	PWY-6855	chitin degradation I (archaea)
CQB05_05295	PWY-6902	chitin degradation II
CQB05_05295	PWY-7822	CQB05_05295
CQB05_05330	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CQB05_05330	PWY-6167	flavin biosynthesis II (archaea)
CQB05_05330	PWY-6168	flavin biosynthesis III (fungi)
CQB05_05330	PWY-7863	CQB05_05330
CQB05_05340	PWY-7884	CQB05_05340
CQB05_05565	PWY-7425	2-chloroacrylate degradation I
CQB05_05650	PWY-4041	&gamma;-glutamyl cycle
CQB05_05650	PWY-7942	CQB05_05650
CQB05_05660	PWY-4041	&gamma;-glutamyl cycle
CQB05_05660	PWY-7942	CQB05_05660
CQB05_05730	PWY-5704	urea degradation II
CQB05_05740	PWY-5704	urea degradation II
CQB05_05745	PWY-5704	urea degradation II
CQB05_05875	PWY-7991	CQB05_05875
CQB05_05885	PWY-3781	aerobic respiration I (cytochrome c)
CQB05_05885	PWY-4521	arsenite oxidation I (respiratory)
CQB05_05885	PWY-6692	Fe(II) oxidation
CQB05_05885	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CQB05_06015	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CQB05_06055	PWY-6717	(1,4)-&beta;-xylan degradation
CQB05_06055	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
CQB05_06120	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CQB05_06120	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CQB05_06120	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CQB05_06160	PWY-7560	methylerythritol phosphate pathway II
CQB05_06180	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CQB05_06230	PWY-6499	D-glucarate degradation II
CQB05_06270	PWY-5663	tetrahydrobiopterin biosynthesis I
CQB05_06270	PWY-5664	tetrahydrobiopterin biosynthesis II
CQB05_06270	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CQB05_06270	PWY-6703	preQ<sub>0</sub> biosynthesis
CQB05_06270	PWY-6983	tetrahydrobiopterin biosynthesis III
CQB05_06270	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CQB05_06270	PWY-7852	CQB05_06270
CQB05_06290	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CQB05_06335	PWY-5839	menaquinol-7 biosynthesis
CQB05_06335	PWY-5844	menaquinol-9 biosynthesis
CQB05_06335	PWY-5849	menaquinol-6 biosynthesis
CQB05_06335	PWY-5890	menaquinol-10 biosynthesis
CQB05_06335	PWY-5891	menaquinol-11 biosynthesis
CQB05_06335	PWY-5892	menaquinol-12 biosynthesis
CQB05_06335	PWY-5895	menaquinol-13 biosynthesis
CQB05_06410	PWY-2681	<i>trans</i>-zeatin biosynthesis
CQB05_06415	PWY-2681	<i>trans</i>-zeatin biosynthesis
CQB05_06425	PWY-2681	<i>trans</i>-zeatin biosynthesis
CQB05_06435	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CQB05_06480	PWY-3341	L-proline biosynthesis III
CQB05_06480	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CQB05_06540	PWY-7851	CQB05_06540
CQB05_06565	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_06610	PWY-3781	aerobic respiration I (cytochrome c)
CQB05_06610	PWY-6692	Fe(II) oxidation
CQB05_06610	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
CQB05_06610	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CQB05_06640	PWY-7805	CQB05_06640
CQB05_06640	PWY-7807	CQB05_06640
CQB05_06645	PWY-6511	3-methylarginine biosynthesis
CQB05_06735	PWY-6012	acyl carrier protein metabolism I
CQB05_06735	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CQB05_06735	PWY-6289	petrobactin biosynthesis
CQB05_06900	PWY-7425	2-chloroacrylate degradation I
CQB05_06910	PWY-5101	L-isoleucine biosynthesis II
CQB05_06910	PWY-5103	L-isoleucine biosynthesis III
CQB05_06910	PWY-5104	L-isoleucine biosynthesis IV
CQB05_06910	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CQB05_06955	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CQB05_06975	PWY-7560	methylerythritol phosphate pathway II
CQB05_07110	PWY-4381	fatty acid biosynthesis initiation I
CQB05_07115	PWY-4381	fatty acid biosynthesis initiation I
CQB05_07150	PWY-5080	very long chain fatty acid biosynthesis I
CQB05_07150	PWY-5972	stearate biosynthesis I (animals and fungi)
CQB05_07150	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CQB05_07150	PWY-6598	sciadonate biosynthesis
CQB05_07150	PWY-7036	very long chain fatty acid biosynthesis II
CQB05_07150	PWY-7601	arachidonate biosynthesis IV (8-detaturase)
CQB05_07150	PWY-7602	icosapentaenoate biosynthesis V (&Delta;8 desaturase)
CQB05_07150	PWY-7619	juniperonate biosynthesis
CQB05_07150	PWY-7724	CQB05_07150
CQB05_07150	PWY-7725	CQB05_07150
CQB05_07160	PWY-6157	autoinducer AI-1 biosynthesis
CQB05_07180	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CQB05_07210	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CQB05_07215	PWY-5642	2,4-dinitrotoluene degradation
CQB05_07305	PWY-5316	nicotine biosynthesis
CQB05_07305	PWY-7342	superpathway of nicotine biosynthesis
CQB05_07315	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CQB05_07320	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CQB05_07320	PWY-6578	8-amino-7-oxononanoate biosynthesis III
CQB05_07320	PWY-7147	8-amino-7-oxononanoate biosynthesis II
CQB05_07325	PWY-6703	preQ<sub>0</sub> biosynthesis
CQB05_07350	PWY-5958	acridone alkaloid biosynthesis
CQB05_07350	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CQB05_07350	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CQB05_07355	PWY-5316	nicotine biosynthesis
CQB05_07355	PWY-7342	superpathway of nicotine biosynthesis
CQB05_07360	PWY-5316	nicotine biosynthesis
CQB05_07360	PWY-5381	pyridine nucleotide cycling (plants)
CQB05_07360	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CQB05_07360	PWY-7342	superpathway of nicotine biosynthesis
CQB05_07365	PWY-6654	phosphopantothenate biosynthesis III
CQB05_07375	PWY-5667	CDP-diacylglycerol biosynthesis I
CQB05_07375	PWY-5981	CDP-diacylglycerol biosynthesis III
CQB05_07375	PWY-7902	CQB05_07375
CQB05_07395	PWY-1622	formaldehyde assimilation I (serine pathway)
CQB05_07395	PWY-5484	glycolysis II (from fructose 6-phosphate)
CQB05_07450	PWY-7851	CQB05_07450
CQB05_07635	PWY-3781	aerobic respiration I (cytochrome c)
CQB05_07635	PWY-4521	arsenite oxidation I (respiratory)
CQB05_07635	PWY-6692	Fe(II) oxidation
CQB05_07635	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CQB05_07745	PWY-5033	nicotinate degradation II
CQB05_07745	PWY-6993	nicotine degradation II (pyrrolidine pathway)
CQB05_07745	PWY-7128	nicotine degradation III (VPP pathway)
CQB05_07745	PWY-722	nicotinate degradation I
CQB05_07795	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CQB05_07815	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CQB05_07815	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CQB05_07815	PWY-7717	CQB05_07815
CQB05_07815	PWY-7733	CQB05_07815
CQB05_07815	PWY-7734	CQB05_07815
CQB05_07815	PWY-7765	CQB05_07815
CQB05_07820	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CQB05_07825	PWY-1361	benzoyl-CoA degradation I (aerobic)
CQB05_07825	PWY-2361	3-oxoadipate degradation
CQB05_07825	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CQB05_07990	PWY-5381	pyridine nucleotide cycling (plants)
CQB05_07990	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CQB05_07990	PWY-6596	adenosine nucleotides degradation I
CQB05_07990	PWY-6606	guanosine nucleotides degradation II
CQB05_07990	PWY-6607	guanosine nucleotides degradation I
CQB05_07990	PWY-6608	guanosine nucleotides degradation III
CQB05_07990	PWY-7185	UTP and CTP dephosphorylation I
CQB05_07990	PWY-7821	CQB05_07990
CQB05_08015	PWY-7052	cyanophycin metabolism
CQB05_08020	PWY-7052	cyanophycin metabolism
CQB05_08300	PWY-6749	CMP-legionaminate biosynthesis I
CQB05_08315	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CQB05_08355	PWY-7883	CQB05_08355
CQB05_08410	PWY-2201	folate transformations I
CQB05_08410	PWY-3841	folate transformations II
CQB05_08420	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CQB05_08555	PWY-1361	benzoyl-CoA degradation I (aerobic)
CQB05_08555	PWY-5109	2-methylbutanoate biosynthesis
CQB05_08555	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CQB05_08555	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CQB05_08555	PWY-5177	glutaryl-CoA degradation
CQB05_08555	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_08555	PWY-6435	4-hydroxybenzoate biosynthesis V
CQB05_08555	PWY-6583	pyruvate fermentation to butanol I
CQB05_08555	PWY-6863	pyruvate fermentation to hexanol
CQB05_08555	PWY-6883	pyruvate fermentation to butanol II
CQB05_08555	PWY-6944	androstenedione degradation
CQB05_08555	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CQB05_08555	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CQB05_08555	PWY-7007	methyl ketone biosynthesis
CQB05_08555	PWY-7046	4-coumarate degradation (anaerobic)
CQB05_08555	PWY-7094	fatty acid salvage
CQB05_08555	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CQB05_08555	PWY-735	jasmonic acid biosynthesis
CQB05_08555	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CQB05_08555	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CQB05_08555	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CQB05_08555	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CQB05_08555	PWY-7726	CQB05_08555
CQB05_08555	PWY-7778	CQB05_08555
CQB05_08555	PWY-7779	CQB05_08555
CQB05_08910	PWY-5669	phosphatidylethanolamine biosynthesis I
CQB05_08940	PWY-5028	L-histidine degradation II
CQB05_08940	PWY-5030	L-histidine degradation III
CQB05_08955	PWY-5028	L-histidine degradation II
CQB05_08955	PWY-5030	L-histidine degradation III
CQB05_08960	PWY-5028	L-histidine degradation II
CQB05_08960	PWY-5030	L-histidine degradation III
CQB05_09020	PWY-5874	heme degradation
CQB05_09045	PWY-622	starch biosynthesis
CQB05_09045	PWY-7902	CQB05_09045
CQB05_09055	PWY-2661	trehalose biosynthesis V
CQB05_09060	PWY-2661	trehalose biosynthesis V
CQB05_09060	PWY-5941	glycogen degradation II (eukaryotic)
CQB05_09060	PWY-6724	starch degradation II
CQB05_09060	PWY-6737	starch degradation V
CQB05_09060	PWY-7238	sucrose biosynthesis II
CQB05_09065	PWY-622	starch biosynthesis
CQB05_09110	PWY-1622	formaldehyde assimilation I (serine pathway)
CQB05_09110	PWY-181	photorespiration
CQB05_09110	PWY-2161	folate polyglutamylation
CQB05_09110	PWY-2201	folate transformations I
CQB05_09110	PWY-3661	glycine betaine degradation I
CQB05_09110	PWY-3661-1	glycine betaine degradation II (mammalian)
CQB05_09110	PWY-3841	folate transformations II
CQB05_09110	PWY-5497	purine nucleobases degradation II (anaerobic)
CQB05_09125	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CQB05_09165	PWY-2582	brassinosteroid biosynthesis II
CQB05_09165	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CQB05_09165	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CQB05_09165	PWY-6948	sitosterol degradation to androstenedione
CQB05_09165	PWY-699	brassinosteroid biosynthesis I
CQB05_09165	PWY-7299	progesterone biosynthesis
CQB05_09400	PWY-7892	CQB05_09400
CQB05_09420	PWY-6683	sulfate reduction III (assimilatory)
CQB05_09430	PWY-5278	sulfite oxidation III
CQB05_09430	PWY-5340	sulfate activation for sulfonation
CQB05_09430	PWY-6683	sulfate reduction III (assimilatory)
CQB05_09430	PWY-6932	selenate reduction
CQB05_09435	PWY-5278	sulfite oxidation III
CQB05_09435	PWY-5340	sulfate activation for sulfonation
CQB05_09435	PWY-6683	sulfate reduction III (assimilatory)
CQB05_09435	PWY-6932	selenate reduction
CQB05_09445	PWY-101	photosynthesis light reactions
CQB05_09490	PWY-6910	hydroxymethylpyrimidine salvage
CQB05_09490	PWY-7356	thiamin salvage IV (yeast)
CQB05_09490	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CQB05_09505	PWY-6891	thiazole biosynthesis II (Bacillus)
CQB05_09505	PWY-6892	thiazole biosynthesis I (E. coli)
CQB05_09510	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CQB05_09510	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CQB05_09510	PWY-6897	thiamin salvage II
CQB05_09510	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CQB05_09510	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CQB05_09510	PWY-7356	thiamin salvage IV (yeast)
CQB05_09510	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CQB05_09520	PWY-1361	benzoyl-CoA degradation I (aerobic)
CQB05_09520	PWY-5109	2-methylbutanoate biosynthesis
CQB05_09520	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CQB05_09520	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CQB05_09520	PWY-5177	glutaryl-CoA degradation
CQB05_09520	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_09520	PWY-6435	4-hydroxybenzoate biosynthesis V
CQB05_09520	PWY-6583	pyruvate fermentation to butanol I
CQB05_09520	PWY-6863	pyruvate fermentation to hexanol
CQB05_09520	PWY-6883	pyruvate fermentation to butanol II
CQB05_09520	PWY-6944	androstenedione degradation
CQB05_09520	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CQB05_09520	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CQB05_09520	PWY-7007	methyl ketone biosynthesis
CQB05_09520	PWY-7046	4-coumarate degradation (anaerobic)
CQB05_09520	PWY-7094	fatty acid salvage
CQB05_09520	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CQB05_09520	PWY-735	jasmonic acid biosynthesis
CQB05_09520	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CQB05_09520	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CQB05_09520	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CQB05_09520	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CQB05_09520	PWY-7726	CQB05_09520
CQB05_09520	PWY-7778	CQB05_09520
CQB05_09520	PWY-7779	CQB05_09520
CQB05_09600	PWY-7255	ergothioneine biosynthesis I (bacteria)
CQB05_09605	PWY-7255	ergothioneine biosynthesis I (bacteria)
CQB05_09605	PWY-7550	ergothioneine biosynthesis II (fungi)
CQB05_09645	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CQB05_09645	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CQB05_09645	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CQB05_09650	PWY-7799	CQB05_09650
CQB05_09650	PWY-7800	CQB05_09650
CQB05_09675	PWY-7801	CQB05_09675
CQB05_09680	PWY-7802	CQB05_09680
CQB05_09695	PWY-6871	3-methylbutanol biosynthesis
CQB05_09700	PWY-5669	phosphatidylethanolamine biosynthesis I
CQB05_09705	PWY-5103	L-isoleucine biosynthesis III
CQB05_09705	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CQB05_09710	PWY-5101	L-isoleucine biosynthesis II
CQB05_09710	PWY-5103	L-isoleucine biosynthesis III
CQB05_09710	PWY-5104	L-isoleucine biosynthesis IV
CQB05_09710	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CQB05_09710	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CQB05_09710	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CQB05_09710	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CQB05_09715	PWY-5101	L-isoleucine biosynthesis II
CQB05_09715	PWY-5103	L-isoleucine biosynthesis III
CQB05_09715	PWY-5104	L-isoleucine biosynthesis IV
CQB05_09715	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CQB05_09715	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CQB05_09715	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CQB05_09715	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CQB05_09740	PWY-7039	phosphatidate metabolism, as a signaling molecule
CQB05_09740	PWY-7817	CQB05_09740
CQB05_09755	PWY-5381	pyridine nucleotide cycling (plants)
CQB05_09755	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CQB05_09755	PWY-7761	CQB05_09755
CQB05_09815	PWY-5506	methanol oxidation to formaldehyde IV
CQB05_09980	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CQB05_10145	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CQB05_10150	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CQB05_10150	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CQB05_10150	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CQB05_10190	PWY-6123	inosine-5'-phosphate biosynthesis I
CQB05_10190	PWY-6124	inosine-5'-phosphate biosynthesis II
CQB05_10190	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CQB05_10190	PWY-7234	inosine-5'-phosphate biosynthesis III
CQB05_10200	PWY-5350	thiosulfate disproportionation III (rhodanese)
CQB05_10200	PWY-7927	CQB05_10200
CQB05_10230	PWY-7183	pyrimidine nucleobases salvage I
CQB05_10370	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CQB05_10370	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CQB05_10375	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CQB05_10380	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CQB05_10415	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CQB05_10415	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CQB05_10415	PWY-5989	stearate biosynthesis II (bacteria and plants)
CQB05_10415	PWY-6113	superpathway of mycolate biosynthesis
CQB05_10415	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CQB05_10415	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CQB05_10415	PWY-7663	gondoate biosynthesis (anaerobic)
CQB05_10415	PWY-7664	oleate biosynthesis IV (anaerobic)
CQB05_10415	PWY-7858	CQB05_10415
CQB05_10415	PWYG-321	mycolate biosynthesis
CQB05_10520	PWY-181	photorespiration
CQB05_10525	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CQB05_10525	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CQB05_10525	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CQB05_10525	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
CQB05_10525	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
CQB05_10525	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
CQB05_10525	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
CQB05_10525	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CQB05_10525	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
CQB05_10525	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
CQB05_10545	PWY-3461	L-tyrosine biosynthesis II
CQB05_10545	PWY-3462	L-phenylalanine biosynthesis II
CQB05_10545	PWY-6120	L-tyrosine biosynthesis III
CQB05_10545	PWY-6627	salinosporamide A biosynthesis
CQB05_10545	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CQB05_10545	PWY-7626	bacilysin biosynthesis
CQB05_10550	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CQB05_10555	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CQB05_10555	PWY-7205	CMP phosphorylation
CQB05_10665	PWY-5381	pyridine nucleotide cycling (plants)
CQB05_10670	PWY-4041	&gamma;-glutamyl cycle
CQB05_10670	PWY-4061	glutathione-mediated detoxification I
CQB05_10670	PWY-5826	hypoglycin biosynthesis
CQB05_10670	PWY-6842	glutathione-mediated detoxification II
CQB05_10670	PWY-7112	4-hydroxy-2-nonenal detoxification
CQB05_10670	PWY-7559	glutathione degradation (DUG pathway - yeast)
CQB05_10740	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
CQB05_10740	PWY-6853	ethylene biosynthesis II (microbes)
CQB05_10740	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CQB05_10970	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CQB05_10985	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CQB05_10985	PWY-6596	adenosine nucleotides degradation I
CQB05_10985	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CQB05_11200	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CQB05_11200	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CQB05_11200	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CQB05_11200	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CQB05_11200	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CQB05_11200	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CQB05_11315	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CQB05_11325	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CQB05_11325	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CQB05_11325	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CQB05_11325	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CQB05_11340	PWY-2161	folate polyglutamylation
CQB05_11355	PWY-5532	adenosine nucleotides degradation IV
CQB05_11355	PWY-7181	pyrimidine deoxyribonucleosides degradation
CQB05_11360	PWY-4983	L-citrulline-nitric oxide cycle
CQB05_11360	PWY-4984	urea cycle
CQB05_11360	PWY-5	canavanine biosynthesis
CQB05_11360	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_11360	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CQB05_11365	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CQB05_11365	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CQB05_11365	PWY-7953	CQB05_11365
CQB05_11430	PWY-5484	glycolysis II (from fructose 6-phosphate)
CQB05_11480	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CQB05_11480	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CQB05_11480	PWY-5989	stearate biosynthesis II (bacteria and plants)
CQB05_11480	PWY-5994	palmitate biosynthesis I (animals and fungi)
CQB05_11480	PWY-6113	superpathway of mycolate biosynthesis
CQB05_11480	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CQB05_11480	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CQB05_11480	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CQB05_11480	PWY-7663	gondoate biosynthesis (anaerobic)
CQB05_11480	PWY-7664	oleate biosynthesis IV (anaerobic)
CQB05_11480	PWY-7858	CQB05_11480
CQB05_11480	PWYG-321	mycolate biosynthesis
CQB05_11505	PWY-7560	methylerythritol phosphate pathway II
CQB05_11510	PWY-5667	CDP-diacylglycerol biosynthesis I
CQB05_11510	PWY-5981	CDP-diacylglycerol biosynthesis III
CQB05_11510	PWY-7817	CQB05_11510
CQB05_11630	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_12430	PWY-5269	cardiolipin biosynthesis II
CQB05_12430	PWY-5668	cardiolipin biosynthesis I
CQB05_12430	PWY-7817	CQB05_12430
CQB05_12440	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CQB05_12440	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CQB05_12450	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_12870	PWY-7560	methylerythritol phosphate pathway II
CQB05_12875	PWY-7560	methylerythritol phosphate pathway II
CQB05_12890	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
CQB05_13015	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CQB05_13015	PWY-6269	adenosylcobalamin salvage from cobinamide II
CQB05_13015	PWY-7964	CQB05_13015
CQB05_13015	PWY-7965	CQB05_13015
CQB05_13015	PWY-7966	CQB05_13015
CQB05_13015	PWY-7967	CQB05_13015
CQB05_13015	PWY-7968	CQB05_13015
CQB05_13015	PWY-7969	CQB05_13015
CQB05_13015	PWY-7970	CQB05_13015
CQB05_13060	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CQB05_13085	PWY-6269	adenosylcobalamin salvage from cobinamide II
CQB05_13085	PWY-7962	CQB05_13085
CQB05_13085	PWY-7971	CQB05_13085
CQB05_13085	PWY-7972	CQB05_13085
CQB05_13125	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CQB05_13165	PWY-3781	aerobic respiration I (cytochrome c)
CQB05_13165	PWY-4521	arsenite oxidation I (respiratory)
CQB05_13165	PWY-6692	Fe(II) oxidation
CQB05_13165	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CQB05_13245	PWY-5101	L-isoleucine biosynthesis II
CQB05_13245	PWY-5103	L-isoleucine biosynthesis III
CQB05_13245	PWY-5104	L-isoleucine biosynthesis IV
CQB05_13245	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CQB05_13275	PWY-5108	L-isoleucine biosynthesis V
CQB05_13275	PWY-5132	humulone biosynthesis
CQB05_13275	PWY-5133	cohumulone biosynthesis
CQB05_13275	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CQB05_13275	PWY-7118	chitin degradation to ethanol
CQB05_13275	PWY-7857	CQB05_13275
CQB05_13315	PWY-5392	reductive TCA cycle II
CQB05_13315	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CQB05_13315	PWY-5690	TCA cycle II (plants and fungi)
CQB05_13315	PWY-5913	TCA cycle VI (obligate autotrophs)
CQB05_13315	PWY-6728	methylaspartate cycle
CQB05_13315	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CQB05_13315	PWY-7254	TCA cycle VII (acetate-producers)
CQB05_13315	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CQB05_13325	PWY-5392	reductive TCA cycle II
CQB05_13325	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CQB05_13325	PWY-5690	TCA cycle II (plants and fungi)
CQB05_13325	PWY-5913	TCA cycle VI (obligate autotrophs)
CQB05_13325	PWY-6728	methylaspartate cycle
CQB05_13325	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CQB05_13325	PWY-7254	TCA cycle VII (acetate-producers)
CQB05_13325	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CQB05_13330	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CQB05_13330	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CQB05_13460	PWY-7072	hopanoid biosynthesis (bacteria)
CQB05_13520	PWY-7072	hopanoid biosynthesis (bacteria)
CQB05_13545	PWY-3841	folate transformations II
CQB05_13545	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CQB05_13545	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CQB05_13545	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CQB05_13545	PWY-7199	pyrimidine deoxyribonucleosides salvage
CQB05_13545	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CQB05_13555	PWY-3841	folate transformations II
CQB05_13555	PWY-6614	tetrahydrofolate biosynthesis
CQB05_13585	PWY-381	nitrate reduction II (assimilatory)
CQB05_13585	PWY-5675	nitrate reduction V (assimilatory)
CQB05_13585	PWY-6549	L-glutamine biosynthesis III
CQB05_13585	PWY-6963	ammonia assimilation cycle I
CQB05_13585	PWY-6964	ammonia assimilation cycle II
CQB05_13650	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CQB05_13720	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CQB05_13720	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CQB05_13720	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CQB05_13720	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CQB05_13720	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CQB05_13720	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CQB05_13720	PWY-7205	CMP phosphorylation
CQB05_13720	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CQB05_13720	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CQB05_13720	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CQB05_13720	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CQB05_13720	PWY-7224	purine deoxyribonucleosides salvage
CQB05_13720	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CQB05_13720	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CQB05_13750	PWY-5381	pyridine nucleotide cycling (plants)
CQB05_13750	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CQB05_13750	PWY-6596	adenosine nucleotides degradation I
CQB05_13750	PWY-6606	guanosine nucleotides degradation II
CQB05_13750	PWY-6607	guanosine nucleotides degradation I
CQB05_13750	PWY-6608	guanosine nucleotides degradation III
CQB05_13750	PWY-7185	UTP and CTP dephosphorylation I
CQB05_13750	PWY-7821	CQB05_13750
CQB05_13770	PWY-4041	&gamma;-glutamyl cycle
CQB05_13770	PWY-4061	glutathione-mediated detoxification I
CQB05_13770	PWY-5826	hypoglycin biosynthesis
CQB05_13770	PWY-6842	glutathione-mediated detoxification II
CQB05_13770	PWY-7112	4-hydroxy-2-nonenal detoxification
CQB05_13770	PWY-7559	glutathione degradation (DUG pathway - yeast)
CQB05_13910	PWY-5484	glycolysis II (from fructose 6-phosphate)
CQB05_13910	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CQB05_13935	PWY-7782	CQB05_13935
CQB05_13935	PWY-7783	CQB05_13935
CQB05_14035	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CQB05_14095	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CQB05_14095	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CQB05_14135	PWY-2941	L-lysine biosynthesis II
CQB05_14135	PWY-2942	L-lysine biosynthesis III
CQB05_14135	PWY-5097	L-lysine biosynthesis VI
CQB05_14180	PWY-7851	CQB05_14180
CQB05_14185	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CQB05_14185	PWY-7177	UTP and CTP dephosphorylation II
CQB05_14185	PWY-7185	UTP and CTP dephosphorylation I
CQB05_14190	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CQB05_14190	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CQB05_14210	PWY-1042	glycolysis IV (plant cytosol)
CQB05_14210	PWY-1622	formaldehyde assimilation I (serine pathway)
CQB05_14210	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CQB05_14210	PWY-5484	glycolysis II (from fructose 6-phosphate)
CQB05_14210	PWY-5723	Rubisco shunt
CQB05_14210	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CQB05_14210	PWY-6886	1-butanol autotrophic biosynthesis
CQB05_14210	PWY-6901	superpathway of glucose and xylose degradation
CQB05_14210	PWY-7003	glycerol degradation to butanol
CQB05_14210	PWY-7124	ethylene biosynthesis V (engineered)
CQB05_14210	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CQB05_14270	PWY-5686	UMP biosynthesis
CQB05_14270	PWY-7790	CQB05_14270
CQB05_14270	PWY-7791	CQB05_14270
CQB05_14285	PWY-6700	queuosine biosynthesis
CQB05_14350	PWY-2781	<i>cis</i>-zeatin biosynthesis
CQB05_14520	PWY-1042	glycolysis IV (plant cytosol)
CQB05_14520	PWY-5484	glycolysis II (from fructose 6-phosphate)
CQB05_14520	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CQB05_14520	PWY-7003	glycerol degradation to butanol
CQB05_14590	PWY-6823	molybdenum cofactor biosynthesis
CQB05_14590	PWY-7887	CQB05_14590
CQB05_14615	PWY-2941	L-lysine biosynthesis II
CQB05_14615	PWY-2942	L-lysine biosynthesis III
CQB05_14615	PWY-5097	L-lysine biosynthesis VI
CQB05_14625	PWY-6823	molybdenum cofactor biosynthesis
CQB05_14730	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CQB05_14740	PWY-2941	L-lysine biosynthesis II
CQB05_14740	PWY-2942	L-lysine biosynthesis III
CQB05_14740	PWY-5097	L-lysine biosynthesis VI
CQB05_14740	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_14740	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
CQB05_14740	PWY-6559	spermidine biosynthesis II
CQB05_14740	PWY-6562	norspermidine biosynthesis
CQB05_14740	PWY-7153	grixazone biosynthesis
CQB05_14740	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CQB05_14740	PWY-7977	CQB05_14740
CQB05_14770	PWY-4381	fatty acid biosynthesis initiation I
CQB05_14770	PWY-5743	3-hydroxypropanoate cycle
CQB05_14770	PWY-5744	glyoxylate assimilation
CQB05_14770	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_14770	PWY-6722	candicidin biosynthesis
CQB05_14915	PWY-5367	petroselinate biosynthesis
CQB05_14915	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CQB05_14915	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CQB05_14915	PWY-5989	stearate biosynthesis II (bacteria and plants)
CQB05_14915	PWY-5994	palmitate biosynthesis I (animals and fungi)
CQB05_14915	PWY-6113	superpathway of mycolate biosynthesis
CQB05_14915	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CQB05_14915	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CQB05_14915	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CQB05_14915	PWY-7663	gondoate biosynthesis (anaerobic)
CQB05_14915	PWY-7664	oleate biosynthesis IV (anaerobic)
CQB05_14915	PWY-7858	CQB05_14915
CQB05_14915	PWYG-321	mycolate biosynthesis
CQB05_14920	PWY-4381	fatty acid biosynthesis initiation I
CQB05_14920	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CQB05_14920	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CQB05_14925	PWY-4381	fatty acid biosynthesis initiation I
CQB05_14995	PWY-6700	queuosine biosynthesis
CQB05_15015	PWY-7254	TCA cycle VII (acetate-producers)
CQB05_15030	PWY-4981	L-proline biosynthesis II (from arginine)
CQB05_15030	PWY-4984	urea cycle
CQB05_15030	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CQB05_15065	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CQB05_15065	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CQB05_15065	PWY-7717	CQB05_15065
CQB05_15065	PWY-7733	CQB05_15065
CQB05_15065	PWY-7734	CQB05_15065
CQB05_15065	PWY-7765	CQB05_15065
CQB05_15070	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CQB05_15070	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CQB05_15160	PWY-6610	adenine and adenosine salvage IV
CQB05_15200	PWY-5497	purine nucleobases degradation II (anaerobic)
CQB05_15200	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CQB05_15200	PWY-6538	caffeine degradation III (bacteria, via demethylation)
CQB05_15200	PWY-6596	adenosine nucleotides degradation I
CQB05_15200	PWY-6606	guanosine nucleotides degradation II
CQB05_15200	PWY-6607	guanosine nucleotides degradation I
CQB05_15200	PWY-6608	guanosine nucleotides degradation III
CQB05_15200	PWY-6999	theophylline degradation
CQB05_15275	PWY-5691	urate degradation to allantoin I
CQB05_15275	PWY-7394	urate degradation to allantoin II
CQB05_15275	PWY-7849	CQB05_15275
CQB05_15285	PWY-4041	&gamma;-glutamyl cycle
CQB05_15285	PWY-4061	glutathione-mediated detoxification I
CQB05_15285	PWY-5826	hypoglycin biosynthesis
CQB05_15285	PWY-6842	glutathione-mediated detoxification II
CQB05_15285	PWY-7112	4-hydroxy-2-nonenal detoxification
CQB05_15285	PWY-7559	glutathione degradation (DUG pathway - yeast)
CQB05_15305	PWY-5691	urate degradation to allantoin I
CQB05_15305	PWY-7394	urate degradation to allantoin II
CQB05_15305	PWY-7849	CQB05_15305
CQB05_15370	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CQB05_15370	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CQB05_15385	PWY-1281	sulfoacetaldehyde degradation I
CQB05_15385	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CQB05_15385	PWY-5482	pyruvate fermentation to acetate II
CQB05_15385	PWY-5485	pyruvate fermentation to acetate IV
CQB05_15385	PWY-5497	purine nucleobases degradation II (anaerobic)
CQB05_15385	PWY-6637	sulfolactate degradation II
CQB05_15385	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CQB05_15620	PWY-3821	galactose degradation III
CQB05_15620	PWY-6317	galactose degradation I (Leloir pathway)
CQB05_15620	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CQB05_15620	PWY-6527	stachyose degradation
CQB05_15620	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CQB05_15620	PWY-7344	UDP-D-galactose biosynthesis
CQB05_15725	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CQB05_15725	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CQB05_15725	PWY-7953	CQB05_15725
CQB05_15825	PWY-6164	3-dehydroquinate biosynthesis I
CQB05_15830	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CQB05_15865	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_15865	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CQB05_15865	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CQB05_15865	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_15880	PWY-2941	L-lysine biosynthesis II
CQB05_15880	PWY-2942	L-lysine biosynthesis III
CQB05_15880	PWY-5097	L-lysine biosynthesis VI
CQB05_15945	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CQB05_15945	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CQB05_15960	PWY-5381	pyridine nucleotide cycling (plants)
CQB05_15965	PWY-5381	pyridine nucleotide cycling (plants)
CQB05_15965	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CQB05_15965	PWY-7761	CQB05_15965
CQB05_16105	PWY-5659	GDP-mannose biosynthesis
CQB05_16105	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
CQB05_16130	PWY-3801	sucrose degradation II (sucrose synthase)
CQB05_16130	PWY-5054	sorbitol biosynthesis I
CQB05_16130	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CQB05_16130	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CQB05_16130	PWY-5659	GDP-mannose biosynthesis
CQB05_16130	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CQB05_16130	PWY-621	sucrose degradation III (sucrose invertase)
CQB05_16130	PWY-622	starch biosynthesis
CQB05_16130	PWY-6981	chitin biosynthesis
CQB05_16130	PWY-6992	1,5-anhydrofructose degradation
CQB05_16130	PWY-7238	sucrose biosynthesis II
CQB05_16130	PWY-7347	sucrose biosynthesis III
CQB05_16130	PWY-7385	1,3-propanediol biosynthesis (engineered)
CQB05_16135	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CQB05_16135	PWY-5723	Rubisco shunt
CQB05_16140	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CQB05_16210	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CQB05_16210	PWY-6269	adenosylcobalamin salvage from cobinamide II
CQB05_16210	PWY-7961	CQB05_16210
CQB05_16210	PWY-7963	CQB05_16210
CQB05_16210	PWY-7964	CQB05_16210
CQB05_16210	PWY-7965	CQB05_16210
CQB05_16210	PWY-7966	CQB05_16210
CQB05_16210	PWY-7967	CQB05_16210
CQB05_16210	PWY-7968	CQB05_16210
CQB05_16210	PWY-7969	CQB05_16210
CQB05_16210	PWY-7970	CQB05_16210
CQB05_16210	PWY-7975	CQB05_16210
CQB05_16275	PWY-4202	arsenate detoxification I (glutaredoxin)
CQB05_16275	PWY-4621	arsenate detoxification II (glutaredoxin)
CQB05_16300	PWY-5686	UMP biosynthesis
CQB05_16300	PWY-7790	CQB05_16300
CQB05_16300	PWY-7791	CQB05_16300
CQB05_16360	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CQB05_16370	PWY-6123	inosine-5'-phosphate biosynthesis I
CQB05_16370	PWY-6124	inosine-5'-phosphate biosynthesis II
CQB05_16370	PWY-7234	inosine-5'-phosphate biosynthesis III
CQB05_16420	PWY-5963	thio-molybdenum cofactor biosynthesis
CQB05_16455	PWY-6059	dimethyl sulfide degradation II (oxidation)
CQB05_16530	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CQB05_16530	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CQB05_16530	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CQB05_16530	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CQB05_16530	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CQB05_16530	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CQB05_16530	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CQB05_16530	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CQB05_16535	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CQB05_16535	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CQB05_16535	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CQB05_16535	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CQB05_16535	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CQB05_16535	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CQB05_16535	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CQB05_16535	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CQB05_16580	PWY-7883	CQB05_16580
CQB05_16590	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CQB05_16590	PWY-6164	3-dehydroquinate biosynthesis I
CQB05_16590	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CQB05_16605	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CQB05_16615	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_16615	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CQB05_16615	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CQB05_16615	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_16640	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CQB05_16645	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_16645	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CQB05_16645	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CQB05_16645	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_16700	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
CQB05_16725	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CQB05_16725	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CQB05_16725	PWY-7953	CQB05_16725
CQB05_16730	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CQB05_16730	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CQB05_16730	PWY-7953	CQB05_16730
CQB05_16735	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_16735	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CQB05_16735	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CQB05_16735	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_16740	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_16740	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CQB05_16740	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CQB05_16740	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_16745	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CQB05_16745	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CQB05_16750	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_16750	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CQB05_16750	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_16755	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CQB05_16755	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CQB05_16755	PWY-7953	CQB05_16755
CQB05_16765	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_16765	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_16845	PWY-2941	L-lysine biosynthesis II
CQB05_16845	PWY-5097	L-lysine biosynthesis VI
CQB05_16995	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_17070	PWY-5101	L-isoleucine biosynthesis II
CQB05_17070	PWY-5103	L-isoleucine biosynthesis III
CQB05_17070	PWY-5104	L-isoleucine biosynthesis IV
CQB05_17070	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CQB05_17485	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CQB05_17485	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CQB05_17485	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CQB05_17485	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CQB05_17485	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CQB05_17485	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CQB05_17485	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CQB05_17485	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CQB05_17490	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CQB05_17490	PWY-5743	3-hydroxypropanoate cycle
CQB05_17490	PWY-5744	glyoxylate assimilation
CQB05_17490	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_17490	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CQB05_17490	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CQB05_17490	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CQB05_17510	PWY-6748	nitrate reduction VII (denitrification)
CQB05_17515	PWY-6748	nitrate reduction VII (denitrification)
CQB05_17580	PWY-2201	folate transformations I
CQB05_17580	PWY-5497	purine nucleobases degradation II (anaerobic)
CQB05_17580	PWY-7909	CQB05_17580
CQB05_17620	PWY-6832	2-aminoethylphosphonate degradation II
CQB05_17630	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CQB05_17775	PWY-4261	glycerol degradation I
CQB05_17775	PWY-6118	glycerol-3-phosphate shuttle
CQB05_17775	PWY-6952	glycerophosphodiester degradation
CQB05_17810	PWY-4261	glycerol degradation I
CQB05_17815	PWY-3341	L-proline biosynthesis III
CQB05_17815	PWY-4981	L-proline biosynthesis II (from arginine)
CQB05_17815	PWY-6344	L-ornithine degradation II (Stickland reaction)
CQB05_17875	PWY-6700	queuosine biosynthesis
CQB05_17910	PWY-5958	acridone alkaloid biosynthesis
CQB05_17910	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CQB05_17910	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CQB05_18525	PWY-7980	CQB05_18525
CQB05_18625	PWY-3461	L-tyrosine biosynthesis II
CQB05_18625	PWY-3462	L-phenylalanine biosynthesis II
CQB05_18625	PWY-6120	L-tyrosine biosynthesis III
CQB05_18625	PWY-6627	salinosporamide A biosynthesis
CQB05_18625	PWY-7626	bacilysin biosynthesis
CQB05_18635	PWY-2002	isoflavonoid biosynthesis I
CQB05_18635	PWY-5059	pinobanksin biosynthesis
CQB05_18635	PWY-6325	echinatin biosynthesis
CQB05_18635	PWY-6787	flavonoid biosynthesis (in equisetum)
CQB05_18635	PWY-7397	naringenin biosynthesis (engineered)
CQB05_18635	PWY-7897	CQB05_18635
CQB05_18640	PWY-181	photorespiration
CQB05_18650	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CQB05_18650	PWY-5723	Rubisco shunt
CQB05_18670	PWY-6840	homoglutathione biosynthesis
CQB05_18670	PWY-7255	ergothioneine biosynthesis I (bacteria)
CQB05_18690	PWY-5269	cardiolipin biosynthesis II
CQB05_18690	PWY-5668	cardiolipin biosynthesis I
CQB05_18690	PWY-7817	CQB05_18690
CQB05_18800	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CQB05_18800	PWY-7118	chitin degradation to ethanol
CQB05_18800	PWY-7294	xylose degradation IV
CQB05_18800	PWY-7295	L-arabinose degradation IV
CQB05_18800	PWY-7854	CQB05_18800
CQB05_18975	PWY-7980	CQB05_18975
CQB05_18985	PWY-7980	CQB05_18985
CQB05_19020	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CQB05_19020	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CQB05_19025	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CQB05_19025	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CQB05_19180	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_19180	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_19205	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CQB05_19205	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CQB05_19360	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_19360	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_19385	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CQB05_19400	PWY-5686	UMP biosynthesis
CQB05_19400	PWY-7790	CQB05_19400
CQB05_19400	PWY-7791	CQB05_19400
CQB05_19495	PWY-723	alkylnitronates degradation
CQB05_19530	PWY-5057	L-valine degradation II
CQB05_19530	PWY-5076	L-leucine degradation III
CQB05_19530	PWY-5078	L-isoleucine degradation II
CQB05_19530	PWY-5101	L-isoleucine biosynthesis II
CQB05_19530	PWY-5103	L-isoleucine biosynthesis III
CQB05_19530	PWY-5104	L-isoleucine biosynthesis IV
CQB05_19530	PWY-5108	L-isoleucine biosynthesis V
CQB05_19530	PWY-7767	CQB05_19530
CQB05_19585	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CQB05_19755	PWY-7782	CQB05_19755
CQB05_19755	PWY-7783	CQB05_19755
CQB05_19785	PWY-2201	folate transformations I
CQB05_19785	PWY-3841	folate transformations II
CQB05_19785	PWY-7977	CQB05_19785
CQB05_19820	PWY-5694	allantoin degradation to glyoxylate I
CQB05_19820	PWY-5705	allantoin degradation to glyoxylate III
CQB05_19900	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CQB05_20155	PWY-6703	preQ<sub>0</sub> biosynthesis
CQB05_20160	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CQB05_20235	PWY-5669	phosphatidylethanolamine biosynthesis I
CQB05_20250	PWY-31	canavanine degradation
CQB05_20250	PWY-4984	urea cycle
CQB05_20250	PWY-6305	putrescine biosynthesis IV
CQB05_20250	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CQB05_20255	PWY-5108	L-isoleucine biosynthesis V
CQB05_20255	PWY-5132	humulone biosynthesis
CQB05_20255	PWY-5133	cohumulone biosynthesis
CQB05_20255	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CQB05_20255	PWY-7118	chitin degradation to ethanol
CQB05_20255	PWY-7857	CQB05_20255
CQB05_20490	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CQB05_20500	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CQB05_20505	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CQB05_20515	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CQB05_20520	PWY-5194	siroheme biosynthesis
CQB05_20520	PWY-5196	factor 430 biosynthesis
CQB05_20520	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CQB05_20755	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CQB05_20755	PWY-6164	3-dehydroquinate biosynthesis I
CQB05_20755	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CQB05_20765	PWY-6871	3-methylbutanol biosynthesis
CQB05_20905	PWY-6605	adenine and adenosine salvage II
CQB05_20905	PWY-6610	adenine and adenosine salvage IV
CQB05_20905	PWY-7805	CQB05_20905
CQB05_20905	PWY-7807	CQB05_20905
CQB05_20920	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CQB05_20920	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CQB05_20955	PWY-5344	L-homocysteine biosynthesis
CQB05_21045	PWY-1281	sulfoacetaldehyde degradation I
CQB05_21045	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CQB05_21045	PWY-5482	pyruvate fermentation to acetate II
CQB05_21045	PWY-5485	pyruvate fermentation to acetate IV
CQB05_21045	PWY-5497	purine nucleobases degradation II (anaerobic)
CQB05_21045	PWY-6637	sulfolactate degradation II
CQB05_21045	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CQB05_21110	PWY-5642	2,4-dinitrotoluene degradation
CQB05_21155	PWY-6654	phosphopantothenate biosynthesis III
CQB05_21185	PWY-6167	flavin biosynthesis II (archaea)
CQB05_21185	PWY-6168	flavin biosynthesis III (fungi)
CQB05_21185	PWY-7980	CQB05_21185
CQB05_21220	PWY-7887	CQB05_21220
CQB05_21220	PWY-7892	CQB05_21220
CQB05_21295	PWY-5340	sulfate activation for sulfonation
CQB05_21360	PWY-5686	UMP biosynthesis
CQB05_21360	PWY-7790	CQB05_21360
CQB05_21360	PWY-7791	CQB05_21360
CQB05_21375	PWY-1042	glycolysis IV (plant cytosol)
CQB05_21375	PWY-5484	glycolysis II (from fructose 6-phosphate)
CQB05_21375	PWY-6886	1-butanol autotrophic biosynthesis
CQB05_21375	PWY-6901	superpathway of glucose and xylose degradation
CQB05_21375	PWY-7003	glycerol degradation to butanol
CQB05_21415	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_21415	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CQB05_21420	PWY-5392	reductive TCA cycle II
CQB05_21420	PWY-5537	pyruvate fermentation to acetate V
CQB05_21420	PWY-5538	pyruvate fermentation to acetate VI
CQB05_21420	PWY-5690	TCA cycle II (plants and fungi)
CQB05_21420	PWY-5913	TCA cycle VI (obligate autotrophs)
CQB05_21420	PWY-6728	methylaspartate cycle
CQB05_21420	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CQB05_21420	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CQB05_21425	PWY-5392	reductive TCA cycle II
CQB05_21425	PWY-5537	pyruvate fermentation to acetate V
CQB05_21425	PWY-5538	pyruvate fermentation to acetate VI
CQB05_21425	PWY-5690	TCA cycle II (plants and fungi)
CQB05_21425	PWY-5913	TCA cycle VI (obligate autotrophs)
CQB05_21425	PWY-6728	methylaspartate cycle
CQB05_21425	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CQB05_21425	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CQB05_21455	PWY-6823	molybdenum cofactor biosynthesis
CQB05_21495	PWY-6123	inosine-5'-phosphate biosynthesis I
CQB05_21495	PWY-6124	inosine-5'-phosphate biosynthesis II
CQB05_21495	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CQB05_21495	PWY-7234	inosine-5'-phosphate biosynthesis III
CQB05_21705	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CQB05_21705	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CQB05_21830	PWY-7942	CQB05_21830
CQB05_21920	PWY-1042	glycolysis IV (plant cytosol)
CQB05_21920	PWY-5484	glycolysis II (from fructose 6-phosphate)
CQB05_21920	PWY-6901	superpathway of glucose and xylose degradation
CQB05_21920	PWY-7003	glycerol degradation to butanol
CQB05_21940	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CQB05_21940	PWY-5723	Rubisco shunt
CQB05_21940	PWY-6891	thiazole biosynthesis II (Bacillus)
CQB05_21940	PWY-6892	thiazole biosynthesis I (E. coli)
CQB05_21940	PWY-6901	superpathway of glucose and xylose degradation
CQB05_21940	PWY-7560	methylerythritol phosphate pathway II
CQB05_21960	PWY-1042	glycolysis IV (plant cytosol)
CQB05_21960	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CQB05_21960	PWY-5484	glycolysis II (from fructose 6-phosphate)
CQB05_21960	PWY-5723	Rubisco shunt
CQB05_21960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CQB05_21960	PWY-6886	1-butanol autotrophic biosynthesis
CQB05_21960	PWY-6901	superpathway of glucose and xylose degradation
CQB05_21960	PWY-7003	glycerol degradation to butanol
CQB05_21960	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CQB05_21960	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CQB05_21985	PWY-1042	glycolysis IV (plant cytosol)
CQB05_21985	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CQB05_21985	PWY-5484	glycolysis II (from fructose 6-phosphate)
CQB05_21985	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CQB05_21985	PWY-7385	1,3-propanediol biosynthesis (engineered)
CQB05_22025	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_22025	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_22055	PWY-6123	inosine-5'-phosphate biosynthesis I
CQB05_22055	PWY-7234	inosine-5'-phosphate biosynthesis III
CQB05_22070	PWY-6123	inosine-5'-phosphate biosynthesis I
CQB05_22070	PWY-6124	inosine-5'-phosphate biosynthesis II
CQB05_22070	PWY-7234	inosine-5'-phosphate biosynthesis III
CQB05_22100	PWY-2941	L-lysine biosynthesis II
CQB05_22100	PWY-2942	L-lysine biosynthesis III
CQB05_22100	PWY-5097	L-lysine biosynthesis VI
CQB05_22145	PWY-3341	L-proline biosynthesis III
CQB05_22145	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CQB05_22305	PWY-6854	ethylene biosynthesis III (microbes)
CQB05_22335	PWY-7723	CQB05_22335
CQB05_22340	PWY-7723	CQB05_22340
CQB05_22515	PWY-6700	queuosine biosynthesis
CQB05_22530	PWY-6803	phosphatidylcholine acyl editing
CQB05_22530	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CQB05_22530	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CQB05_22530	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CQB05_22530	PWY-7783	CQB05_22530
CQB05_22560	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CQB05_22560	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CQB05_22560	PWY-7766	CQB05_22560
CQB05_22685	PWY-6167	flavin biosynthesis II (archaea)
CQB05_22875	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CQB05_22945	PWY-7980	CQB05_22945
CQB05_23080	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CQB05_23080	PWY-5743	3-hydroxypropanoate cycle
CQB05_23080	PWY-5744	glyoxylate assimilation
CQB05_23080	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_23080	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CQB05_23080	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CQB05_23080	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CQB05_23155	PWY-4381	fatty acid biosynthesis initiation I
CQB05_23155	PWY-5743	3-hydroxypropanoate cycle
CQB05_23155	PWY-5744	glyoxylate assimilation
CQB05_23155	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_23155	PWY-6722	candicidin biosynthesis
CQB05_23180	PWY-5074	mevalonate degradation
CQB05_23265	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CQB05_23265	PWY-6578	8-amino-7-oxononanoate biosynthesis III
CQB05_23265	PWY-7147	8-amino-7-oxononanoate biosynthesis II
CQB05_23330	PWY-5686	UMP biosynthesis
CQB05_23330	PWY-7790	CQB05_23330
CQB05_23330	PWY-7791	CQB05_23330
CQB05_23355	PWY-1361	benzoyl-CoA degradation I (aerobic)
CQB05_23355	PWY-5109	2-methylbutanoate biosynthesis
CQB05_23355	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CQB05_23355	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CQB05_23355	PWY-5177	glutaryl-CoA degradation
CQB05_23355	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_23355	PWY-6435	4-hydroxybenzoate biosynthesis V
CQB05_23355	PWY-6583	pyruvate fermentation to butanol I
CQB05_23355	PWY-6863	pyruvate fermentation to hexanol
CQB05_23355	PWY-6883	pyruvate fermentation to butanol II
CQB05_23355	PWY-6944	androstenedione degradation
CQB05_23355	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CQB05_23355	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CQB05_23355	PWY-7007	methyl ketone biosynthesis
CQB05_23355	PWY-7046	4-coumarate degradation (anaerobic)
CQB05_23355	PWY-7094	fatty acid salvage
CQB05_23355	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CQB05_23355	PWY-735	jasmonic acid biosynthesis
CQB05_23355	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CQB05_23355	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CQB05_23355	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CQB05_23355	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CQB05_23355	PWY-7726	CQB05_23355
CQB05_23355	PWY-7778	CQB05_23355
CQB05_23355	PWY-7779	CQB05_23355
CQB05_23440	PWY-6936	seleno-amino acid biosynthesis
CQB05_23610	PWY-1361	benzoyl-CoA degradation I (aerobic)
CQB05_23610	PWY-5109	2-methylbutanoate biosynthesis
CQB05_23610	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CQB05_23610	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CQB05_23610	PWY-5177	glutaryl-CoA degradation
CQB05_23610	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CQB05_23610	PWY-6435	4-hydroxybenzoate biosynthesis V
CQB05_23610	PWY-6583	pyruvate fermentation to butanol I
CQB05_23610	PWY-6863	pyruvate fermentation to hexanol
CQB05_23610	PWY-6883	pyruvate fermentation to butanol II
CQB05_23610	PWY-6944	androstenedione degradation
CQB05_23610	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CQB05_23610	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CQB05_23610	PWY-7007	methyl ketone biosynthesis
CQB05_23610	PWY-7046	4-coumarate degradation (anaerobic)
CQB05_23610	PWY-7094	fatty acid salvage
CQB05_23610	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CQB05_23610	PWY-735	jasmonic acid biosynthesis
CQB05_23610	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CQB05_23610	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CQB05_23610	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CQB05_23610	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CQB05_23610	PWY-7726	CQB05_23610
CQB05_23610	PWY-7778	CQB05_23610
CQB05_23610	PWY-7779	CQB05_23610
CQB05_23685	PWY-6617	adenosine nucleotides degradation III
CQB05_23745	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CQB05_23785	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CQB05_23785	PWY-6148	tetrahydromethanopterin biosynthesis
CQB05_23785	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CQB05_23785	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CQB05_23815	PWY-6409	pyoverdine I biosynthesis
CQB05_23815	PWY-6562	norspermidine biosynthesis
CQB05_23815	PWY-761	rhizobactin 1021 biosynthesis
CQB05_23815	PWY-7855	CQB05_23815
CQB05_23815	PWY-7988	CQB05_23815
CQB05_23840	PWY-4381	fatty acid biosynthesis initiation I
CQB05_23845	PWY-5692	allantoin degradation to glyoxylate II
CQB05_23845	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
CQB05_23965	PWY-6134	L-tyrosine biosynthesis IV
CQB05_23965	PWY-7158	L-phenylalanine degradation V
CQB05_24020	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CQB05_24020	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CQB05_24020	PWY-5989	stearate biosynthesis II (bacteria and plants)
CQB05_24020	PWY-5994	palmitate biosynthesis I (animals and fungi)
CQB05_24020	PWY-6113	superpathway of mycolate biosynthesis
CQB05_24020	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CQB05_24020	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CQB05_24020	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CQB05_24020	PWY-7663	gondoate biosynthesis (anaerobic)
CQB05_24020	PWY-7664	oleate biosynthesis IV (anaerobic)
CQB05_24020	PWY-7858	CQB05_24020
CQB05_24020	PWYG-321	mycolate biosynthesis
CQB05_24080	PWY-3961	phosphopantothenate biosynthesis II
CQB05_24095	PWY-3221	dTDP-L-rhamnose biosynthesis II
CQB05_24095	PWY-6808	dTDP-D-forosamine biosynthesis
CQB05_24095	PWY-6942	dTDP-D-desosamine biosynthesis
CQB05_24095	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CQB05_24095	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CQB05_24095	PWY-6974	dTDP-L-olivose biosynthesis
CQB05_24095	PWY-6976	dTDP-L-mycarose biosynthesis
CQB05_24095	PWY-7104	dTDP-L-megosamine biosynthesis
CQB05_24095	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CQB05_24095	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CQB05_24095	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CQB05_24095	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CQB05_24095	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CQB05_24095	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CQB05_24095	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CQB05_24095	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CQB05_24095	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
CQB05_24095	PWY-7688	CQB05_24095
CQB05_24095	PWY-7814	CQB05_24095
CQB05_24105	PWY-3221	dTDP-L-rhamnose biosynthesis II
CQB05_24105	PWY-6808	dTDP-D-forosamine biosynthesis
CQB05_24105	PWY-6942	dTDP-D-desosamine biosynthesis
CQB05_24105	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CQB05_24105	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CQB05_24105	PWY-6974	dTDP-L-olivose biosynthesis
CQB05_24105	PWY-6976	dTDP-L-mycarose biosynthesis
CQB05_24105	PWY-7104	dTDP-L-megosamine biosynthesis
CQB05_24105	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CQB05_24105	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CQB05_24105	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CQB05_24105	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CQB05_24105	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CQB05_24105	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CQB05_24105	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CQB05_24105	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CQB05_24105	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
CQB05_24105	PWY-7688	CQB05_24105
CQB05_24105	PWY-7814	CQB05_24105
CQB05_24220	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CQB05_24220	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CQB05_24220	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CQB05_24225	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CQB05_24225	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
