locus-tag class description Aboo_0003 PF09285 Elongation factor P, C-terminal Aboo_0003 PF08207 Elongation factor P (EF-P) KOW-like domain Aboo_0003 PF01132 Elongation factor P (EF-P) OB domain Aboo_0004 PF00491 Arginase family Aboo_0006 PF00437 Type II/IV secretion system protein Aboo_0009 PF00437 Type II/IV secretion system protein Aboo_0011 PF01938 TRAM domain Aboo_0011 PF05958 tRNA (Uracil-5-)-methyltransferase Aboo_0020 PF03176 MMPL family Aboo_0022 PF01546 Peptidase family M20/M25/M40 Aboo_0022 PF07687 Peptidase dimerisation domain Aboo_0030 PF17827 PrmC N-terminal domain Aboo_0030 PF05175 Methyltransferase small domain Aboo_0037 PF01384 Phosphate transporter family Aboo_0038 PF01555 DNA methylase Aboo_0039 PF00696 Amino acid kinase family Aboo_0043 PF00588 SpoU rRNA Methylase family Aboo_0048 PF06745 KaiC Aboo_0052 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Aboo_0052 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aboo_0054 PF13393 Histidyl-tRNA synthetase Aboo_0054 PF03129 Anticodon binding domain Aboo_0055 PF01554 MatE Aboo_0058 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Aboo_0058 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Aboo_0061 PF00464 Serine hydroxymethyltransferase Aboo_0062 PF01965 DJ-1/PfpI family Aboo_0064 PF01568 Molydopterin dinucleotide binding domain Aboo_0064 PF00384 Molybdopterin oxidoreductase Aboo_0064 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Aboo_0069 PF01029 NusB family Aboo_0069 PF01189 16S rRNA methyltransferase RsmB/F Aboo_0071 PF00177 Ribosomal protein S7p/S5e Aboo_0072 PF00679 Elongation factor G C-terminus Aboo_0072 PF14492 Elongation Factor G, domain II Aboo_0072 PF03764 Elongation factor G, domain IV Aboo_0072 PF03144 Elongation factor Tu domain 2 Aboo_0072 PF00009 Elongation factor Tu GTP binding domain Aboo_0073 PF00009 Elongation factor Tu GTP binding domain Aboo_0074 PF00338 Ribosomal protein S10p/S20e Aboo_0078 PF01513 ATP-NAD kinase Aboo_0079 PF00459 Inositol monophosphatase family Aboo_0080 PF00374 Nickel-dependent hydrogenase Aboo_0082 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Aboo_0082 PF00175 Oxidoreductase NAD-binding domain Aboo_0084 PF13247 4Fe-4S dicluster domain Aboo_0084 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Aboo_0084 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aboo_0085 PF00970 Oxidoreductase FAD-binding domain Aboo_0085 PF00175 Oxidoreductase NAD-binding domain Aboo_0085 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Aboo_0086 PF01266 FAD dependent oxidoreductase Aboo_0089 PF01571 Aminomethyltransferase folate-binding domain Aboo_0089 PF08669 Glycine cleavage T-protein C-terminal barrel domain Aboo_0089 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aboo_0089 PF17806 Sarcosine oxidase A3 domain Aboo_0091 PF00749 tRNA synthetases class I (E and Q), catalytic domain Aboo_0092 PF00589 Phage integrase family Aboo_0092 PF13495 Phage integrase, N-terminal SAM-like domain Aboo_0093 PF01018 GTP1/OBG Aboo_0093 PF01926 50S ribosome-binding GTPase Aboo_0093 PF09269 Domain of unknown function (DUF1967) Aboo_0094 PF08264 Anticodon-binding domain of tRNA Aboo_0094 PF09334 tRNA synthetases class I (M) Aboo_0095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Aboo_0095 PF02811 PHP domain Aboo_0095 PF14579 Helix-hairpin-helix motif Aboo_0095 PF07733 Bacterial DNA polymerase III alpha NTPase domain Aboo_0097 PF01699 Sodium/calcium exchanger protein Aboo_0102 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Aboo_0102 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Aboo_0103 PF10672 S-adenosylmethionine-dependent methyltransferase Aboo_0103 PF02926 THUMP domain Aboo_0103 PF01170 Putative RNA methylase family UPF0020 Aboo_0110 PF02391 MoaE protein Aboo_0111 PF02566 OsmC-like protein Aboo_0112 PF00899 ThiF family Aboo_0112 PF00581 Rhodanese-like domain Aboo_0116 PF02581 Thiamine monophosphate synthase Aboo_0117 PF01276 Orn/Lys/Arg decarboxylase, major domain Aboo_0117 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Aboo_0118 PF01883 Iron-sulfur cluster assembly protein Aboo_0119 PF03167 Uracil DNA glycosylase superfamily Aboo_0120 PF16736 Single Cache-like Aboo_0120 PF00989 PAS fold Aboo_0120 PF00512 His Kinase A (phospho-acceptor) domain Aboo_0120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aboo_0122 PF00753 Metallo-beta-lactamase superfamily Aboo_0122 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Aboo_0122 PF10996 Beta-Casp domain Aboo_0123 PF00227 Proteasome subunit Aboo_0125 PF00005 ABC transporter Aboo_0128 PF00694 Aconitase C-terminal domain Aboo_0129 PF00330 Aconitase family (aconitate hydratase) Aboo_0131 PF07827 KNTase C-terminal domain Aboo_0134 PF00128 Alpha amylase, catalytic domain Aboo_0134 PF02903 Alpha amylase, N-terminal ig-like domain Aboo_0148 PF01370 NAD dependent epimerase/dehydratase family Aboo_0151 PF01170 Putative RNA methylase family UPF0020 Aboo_0151 PF02926 THUMP domain Aboo_0154 PF00133 tRNA synthetases class I (I, L, M and V) Aboo_0154 PF08264 Anticodon-binding domain of tRNA Aboo_0156 PF01791 DeoC/LacD family aldolase Aboo_0157 PF08676 MutL C terminal dimerisation domain Aboo_0157 PF01119 DNA mismatch repair protein, C-terminal domain Aboo_0158 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Aboo_0158 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Aboo_0161 PF02633 Creatinine amidohydrolase Aboo_0166 PF00180 Isocitrate/isopropylmalate dehydrogenase Aboo_0166 PF03737 Aldolase/RraA Aboo_0168 PF04055 Radical SAM superfamily Aboo_0169 PF02901 Pyruvate formate lyase-like Aboo_0169 PF01228 Glycine radical Aboo_0171 PF01546 Peptidase family M20/M25/M40 Aboo_0171 PF07687 Peptidase dimerisation domain Aboo_0174 PF00005 ABC transporter Aboo_0178 PF00583 Acetyltransferase (GNAT) family Aboo_0181 PF01138 3' exoribonuclease family, domain 1 Aboo_0181 PF03725 3' exoribonuclease family, domain 2 Aboo_0182 PF01138 3' exoribonuclease family, domain 1 Aboo_0182 PF03725 3' exoribonuclease family, domain 2 Aboo_0183 PF00013 KH domain Aboo_0183 PF00575 S1 RNA binding domain Aboo_0183 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Aboo_0183 PF01138 3' exoribonuclease family, domain 1 Aboo_0183 PF03725 3' exoribonuclease family, domain 2 Aboo_0184 PF00472 RF-1 domain Aboo_0184 PF03462 PCRF domain Aboo_0186 PF01409 tRNA synthetases class II core domain (F) Aboo_0187 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Aboo_0187 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Aboo_0187 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Aboo_0187 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Aboo_0188 PF17864 RuvB AAA lid domain Aboo_0188 PF05491 RuvB C-terminal winged helix domain Aboo_0188 PF05496 Holliday junction DNA helicase RuvB P-loop domain Aboo_0193 PF08546 Ketopantoate reductase PanE/ApbA C terminal Aboo_0193 PF02558 Ketopantoate reductase PanE/ApbA Aboo_0196 PF04851 Type III restriction enzyme, res subunit Aboo_0196 PF13307 Helicase C-terminal domain Aboo_0196 PF00929 Exonuclease Aboo_0197 PF08494 DEAD/H associated Aboo_0197 PF00271 Helicase conserved C-terminal domain Aboo_0197 PF00270 DEAD/DEAH box helicase Aboo_0198 PF03313 Serine dehydratase alpha chain Aboo_0199 PF03315 Serine dehydratase beta chain Aboo_0200 PF00694 Aconitase C-terminal domain Aboo_0202 PF02146 Sir2 family Aboo_0204 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Aboo_0204 PF14572 Phosphoribosyl synthetase-associated domain Aboo_0207 PF13378 Enolase C-terminal domain-like Aboo_0207 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Aboo_0209 PF08704 tRNA methyltransferase complex GCD14 subunit Aboo_0211 PF08351 Domain of unknown function (DUF1726) Aboo_0211 PF13718 GNAT acetyltransferase 2 Aboo_0211 PF05127 Helicase Aboo_0211 PF17176 tRNA-binding domain Aboo_0214 PF00571 CBS domain Aboo_0218 PF13419 Haloacid dehalogenase-like hydrolase Aboo_0224 PF02245 Methylpurine-DNA glycosylase (MPG) Aboo_0231 PF01747 ATP-sulfurylase Aboo_0231 PF14306 PUA-like domain Aboo_0235 PF00939 Sodium:sulfate symporter transmembrane region Aboo_0238 PF08889 WbqC-like protein family Aboo_0240 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Aboo_0240 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Aboo_0240 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Aboo_0242 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Aboo_0242 PF00953 Glycosyl transferase family 4 Aboo_0243 PF00534 Glycosyl transferases group 1 Aboo_0243 PF13477 Glycosyl transferase 4-like Aboo_0244 PF06463 Molybdenum Cofactor Synthesis C Aboo_0244 PF04055 Radical SAM superfamily Aboo_0245 PF13439 Glycosyltransferase Family 4 Aboo_0245 PF00534 Glycosyl transferases group 1 Aboo_0249 PF00534 Glycosyl transferases group 1 Aboo_0249 PF13439 Glycosyltransferase Family 4 Aboo_0250 PF00535 Glycosyl transferase family 2 Aboo_0255 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Aboo_0256 PF16363 GDP-mannose 4,6 dehydratase Aboo_0257 PF00483 Nucleotidyl transferase Aboo_0265 PF01850 PIN domain Aboo_0270 PF03167 Uracil DNA glycosylase superfamily Aboo_0272 PF01569 PAP2 superfamily Aboo_0274 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 Aboo_0274 PF00535 Glycosyl transferase family 2 Aboo_0278 PF13520 Amino acid permease Aboo_0279 PF01370 NAD dependent epimerase/dehydratase family Aboo_0280 PF00132 Bacterial transferase hexapeptide (six repeats) Aboo_0280 PF12804 MobA-like NTP transferase domain Aboo_0281 PF00962 Adenosine/AMP deaminase Aboo_0282 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Aboo_0282 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Aboo_0282 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Aboo_0282 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Aboo_0284 PF01380 SIS domain Aboo_0285 PF00483 Nucleotidyl transferase Aboo_0287 PF13302 Acetyltransferase (GNAT) domain Aboo_0289 PF03453 MoeA N-terminal region (domain I and II) Aboo_0289 PF03454 MoeA C-terminal region (domain IV) Aboo_0289 PF00994 Probable molybdopterin binding domain Aboo_0294 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Aboo_0296 PF03266 NTPase Aboo_0297 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase Aboo_0300 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Aboo_0300 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Aboo_0301 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Aboo_0309 PF17284 Spermidine synthase tetramerisation domain Aboo_0314 PF02163 Peptidase family M50 Aboo_0314 PF00571 CBS domain Aboo_0318 PF08442 ATP-grasp domain Aboo_0318 PF00549 CoA-ligase Aboo_0319 PF00583 Acetyltransferase (GNAT) family Aboo_0319 PF13380 CoA binding domain Aboo_0319 PF13607 Succinyl-CoA ligase like flavodoxin domain Aboo_0320 PF00583 Acetyltransferase (GNAT) family Aboo_0320 PF13380 CoA binding domain Aboo_0320 PF13607 Succinyl-CoA ligase like flavodoxin domain Aboo_0323 PF02954 Bacterial regulatory protein, Fis family Aboo_0323 PF00989 PAS fold Aboo_0323 PF00158 Sigma-54 interaction domain Aboo_0325 PF00999 Sodium/hydrogen exchanger family Aboo_0328 PF00478 IMP dehydrogenase / GMP reductase domain Aboo_0328 PF00571 CBS domain Aboo_0331 PF01008 Initiation factor 2 subunit family Aboo_0332 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Aboo_0332 PF00591 Glycosyl transferase family, a/b domain Aboo_0332 PF02885 Glycosyl transferase family, helical bundle domain Aboo_0333 PF01297 Zinc-uptake complex component A periplasmic Aboo_0335 PF01131 DNA topoisomerase Aboo_0335 PF01751 Toprim domain Aboo_0336 PF01458 Uncharacterized protein family (UPF0051) Aboo_0337 PF00005 ABC transporter Aboo_0338 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Aboo_0338 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Aboo_0339 PF00108 Thiolase, N-terminal domain Aboo_0339 PF02803 Thiolase, C-terminal domain Aboo_0345 PF07726 ATPase family associated with various cellular activities (AAA) Aboo_0345 PF17863 AAA lid domain Aboo_0348 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Aboo_0349 PF02403 Seryl-tRNA synthetase N-terminal domain Aboo_0349 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aboo_0350 PF01256 Carbohydrate kinase Aboo_0350 PF03853 YjeF-related protein N-terminus Aboo_0352 PF08240 Alcohol dehydrogenase GroES-like domain Aboo_0356 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Aboo_0356 PF02896 PEP-utilising enzyme, TIM barrel domain Aboo_0356 PF00391 PEP-utilising enzyme, mobile domain Aboo_0360 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Aboo_0360 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Aboo_0361 PF02445 Quinolinate synthetase A protein Aboo_0362 PF01958 Domain of unknown function DUF108 Aboo_0362 PF03447 Homoserine dehydrogenase, NAD binding domain Aboo_0366 PF00730 HhH-GPD superfamily base excision DNA repair protein Aboo_0366 PF10576 Iron-sulfur binding domain of endonuclease III Aboo_0366 PF00633 Helix-hairpin-helix motif Aboo_0372 PF00106 short chain dehydrogenase Aboo_0375 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Aboo_0376 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Aboo_0376 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Aboo_0377 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Aboo_0378 PF00146 NADH dehydrogenase Aboo_0379 PF00361 Proton-conducting membrane transporter Aboo_0380 PF00361 Proton-conducting membrane transporter Aboo_0381 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Aboo_0382 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Aboo_0382 PF13244 Domain of unknown function (DUF4040) Aboo_0382 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Aboo_0382 PF00361 Proton-conducting membrane transporter Aboo_0384 PF03334 Na+/H+ antiporter subunit Aboo_0385 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Aboo_0386 PF01899 Na+/H+ ion antiporter subunit Aboo_0391 PF01867 CRISPR associated protein Cas1 Aboo_0395 PF07676 WD40-like Beta Propeller Repeat Aboo_0395 PF00326 Prolyl oligopeptidase family Aboo_0397 PF00709 Adenylosuccinate synthetase Aboo_0399 PF00005 ABC transporter Aboo_0400 PF02151 UvrB/uvrC motif Aboo_0400 PF12826 Helix-hairpin-helix motif Aboo_0400 PF01541 GIY-YIG catalytic domain Aboo_0400 PF08459 UvrC Helix-hairpin-helix N-terminal Aboo_0401 PF00271 Helicase conserved C-terminal domain Aboo_0401 PF00270 DEAD/DEAH box helicase Aboo_0401 PF08148 DSHCT (NUC185) domain Aboo_0402 PF01037 Lrp/AsnC ligand binding domain Aboo_0403 PF00497 Bacterial extracellular solute-binding proteins, family 3 Aboo_0405 PF01434 Peptidase family M41 Aboo_0405 PF17862 AAA+ lid domain Aboo_0405 PF00004 ATPase family associated with various cellular activities (AAA) Aboo_0407 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aboo_0409 PF12911 N-terminal TM domain of oligopeptide transport permease C Aboo_0409 PF00528 Binding-protein-dependent transport system inner membrane component Aboo_0410 PF00005 ABC transporter Aboo_0410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aboo_0411 PF00005 ABC transporter Aboo_0411 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aboo_0413 PF01138 3' exoribonuclease family, domain 1 Aboo_0413 PF03725 3' exoribonuclease family, domain 2 Aboo_0416 PF01872 RibD C-terminal domain Aboo_0417 PF01255 Putative undecaprenyl diphosphate synthase Aboo_0422 PF00216 Bacterial DNA-binding protein Aboo_0423 PF00696 Amino acid kinase family Aboo_0423 PF01472 PUA domain Aboo_0425 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Aboo_0429 PF09190 DALR domain Aboo_0429 PF01406 tRNA synthetases class I (C) catalytic domain Aboo_0430 PF18073 Rubredoxin metal binding domain Aboo_0431 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Aboo_0431 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Aboo_0432 PF01950 Fructose-1,6-bisphosphatase Aboo_0434 PF07664 Ferrous iron transport protein B C terminus Aboo_0434 PF02421 Ferrous iron transport protein B Aboo_0434 PF17910 FeoB cytosolic helical domain Aboo_0434 PF07670 Nucleoside recognition Aboo_0434 PF04023 FeoA domain Aboo_0444 PF06745 KaiC Aboo_0445 PF01259 SAICAR synthetase Aboo_0452 PF01321 Creatinase/Prolidase N-terminal domain Aboo_0452 PF00557 Metallopeptidase family M24 Aboo_0454 PF09186 Domain of unknown function (DUF1949) Aboo_0454 PF01205 Uncharacterized protein family UPF0029 Aboo_0455 PF04493 Endonuclease V Aboo_0456 PF02223 Thymidylate kinase Aboo_0457 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Aboo_0464 PF00202 Aminotransferase class-III Aboo_0465 PF01336 OB-fold nucleic acid binding domain Aboo_0465 PF00152 tRNA synthetases class II (D, K and N) Aboo_0466 PF06745 KaiC Aboo_0468 PF01174 SNO glutamine amidotransferase family Aboo_0469 PF01571 Aminomethyltransferase folate-binding domain Aboo_0469 PF08669 Glycine cleavage T-protein C-terminal barrel domain Aboo_0470 PF02163 Peptidase family M50 Aboo_0478 PF00005 ABC transporter Aboo_0480 PF00294 pfkB family carbohydrate kinase Aboo_0481 PF00834 Ribulose-phosphate 3 epimerase family Aboo_0482 PF00551 Formyl transferase Aboo_0486 PF02568 Thiamine biosynthesis protein (ThiI) Aboo_0486 PF00117 Glutamine amidotransferase class-I Aboo_0486 PF00958 GMP synthase C terminal domain Aboo_0487 PF00731 AIR carboxylase Aboo_0490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Aboo_0490 PF01367 5'-3' exonuclease, C-terminal SAM fold Aboo_0496 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Aboo_0496 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aboo_0497 PF16736 Single Cache-like Aboo_0497 PF00989 PAS fold Aboo_0497 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aboo_0497 PF00512 His Kinase A (phospho-acceptor) domain Aboo_0498 PF02675 S-adenosylmethionine decarboxylase Aboo_0499 PF01861 Branched-chain polyamine synthase A C-terminal domain Aboo_0500 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Aboo_0501 PF00270 DEAD/DEAH box helicase Aboo_0501 PF00271 Helicase conserved C-terminal domain Aboo_0504 PF01145 SPFH domain / Band 7 family Aboo_0504 PF16200 C-terminal region of band_7 Aboo_0507 PF02190 ATP-dependent protease La (LON) substrate-binding domain Aboo_0507 PF05362 Lon protease (S16) C-terminal proteolytic domain Aboo_0507 PF00004 ATPase family associated with various cellular activities (AAA) Aboo_0509 PF05690 Thiazole biosynthesis protein ThiG Aboo_0515 PF17206 SeqA protein N-terminal domain Aboo_0515 PF03925 SeqA protein C-terminal domain Aboo_0516 PF07690 Major Facilitator Superfamily Aboo_0518 PF00027 Cyclic nucleotide-binding domain Aboo_0518 PF00520 Ion transport protein Aboo_0519 PF00535 Glycosyl transferase family 2 Aboo_0520 PF00535 Glycosyl transferase family 2 Aboo_0522 PF10609 NUBPL iron-transfer P-loop NTPase Aboo_0523 PF02511 Thymidylate synthase complementing protein Aboo_0528 PF00480 ROK family Aboo_0529 PF00232 Glycosyl hydrolase family 1 Aboo_0530 PF07690 Major Facilitator Superfamily Aboo_0532 PF08544 GHMP kinases C terminal Aboo_0532 PF00288 GHMP kinases N terminal domain Aboo_0532 PF10509 Galactokinase galactose-binding signature Aboo_0533 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Aboo_0533 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aboo_0536 PF13685 Iron-containing alcohol dehydrogenase Aboo_0538 PF01926 50S ribosome-binding GTPase Aboo_0538 PF06071 Protein of unknown function (DUF933) Aboo_0542 PF02254 TrkA-N domain Aboo_0542 PF02080 TrkA-C domain Aboo_0543 PF02386 Cation transport protein Aboo_0546 PF02677 Epoxyqueuosine reductase QueH Aboo_0548 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Aboo_0555 PF06745 KaiC Aboo_0562 PF05746 DALR anticodon binding domain Aboo_0562 PF03485 Arginyl tRNA synthetase N terminal domain Aboo_0562 PF00750 tRNA synthetases class I (R) Aboo_0569 PF13419 Haloacid dehalogenase-like hydrolase Aboo_0570 PF01702 Queuine tRNA-ribosyltransferase Aboo_0571 PF00679 Elongation factor G C-terminus Aboo_0571 PF00009 Elongation factor Tu GTP binding domain Aboo_0571 PF03144 Elongation factor Tu domain 2 Aboo_0571 PF06421 GTP-binding protein LepA C-terminus Aboo_0573 PF18496 Collagenase G catalytic helper subdomain Aboo_0573 PF01752 Collagenase Aboo_0573 PF08453 Peptidase family M9 N-terminal Aboo_0578 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aboo_0578 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Aboo_0585 PF00155 Aminotransferase class I and II Aboo_0589 PF12327 FtsZ family, C-terminal domain Aboo_0589 PF00091 Tubulin/FtsZ family, GTPase domain Aboo_0590 PF06560 Glucose-6-phosphate isomerase (GPI) Aboo_0595 PF03551 Transcriptional regulator PadR-like family Aboo_0598 PF01048 Phosphorylase superfamily Aboo_0600 PF02615 Malate/L-lactate dehydrogenase Aboo_0601 PF14489 QueF-like protein Aboo_0604 PF13660 Domain of unknown function (DUF4147) Aboo_0604 PF05161 MOFRL family Aboo_0606 PF00117 Glutamine amidotransferase class-I Aboo_0606 PF02540 NAD synthase Aboo_0606 PF00958 GMP synthase C terminal domain Aboo_0607 PF01544 CorA-like Mg2+ transporter protein Aboo_0608 PF00162 Phosphoglycerate kinase Aboo_0609 PF00582 Universal stress protein family Aboo_0610 PF03600 Citrate transporter Aboo_0614 PF02441 Flavoprotein Aboo_0614 PF04127 DNA / pantothenate metabolism flavoprotein Aboo_0616 PF00083 Sugar (and other) transporter Aboo_0617 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Aboo_0619 PF00152 tRNA synthetases class II (D, K and N) Aboo_0619 PF01336 OB-fold nucleic acid binding domain Aboo_0621 PF00155 Aminotransferase class I and II Aboo_0625 PF00719 Inorganic pyrophosphatase Aboo_0634 PF00291 Pyridoxal-phosphate dependent enzyme Aboo_0635 PF00464 Serine hydroxymethyltransferase Aboo_0636 PF01268 Formate--tetrahydrofolate ligase Aboo_0638 PF01380 SIS domain Aboo_0644 PF01914 MarC family integral membrane protein Aboo_0655 PF00814 Glycoprotease family Aboo_0656 PF01725 Ham1 family Aboo_0658 PF01242 6-pyruvoyl tetrahydropterin synthase Aboo_0660 PF02899 Phage integrase, N-terminal SAM-like domain Aboo_0660 PF00589 Phage integrase family Aboo_0661 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aboo_0663 PF01037 Lrp/AsnC ligand binding domain Aboo_0664 PF01899 Na+/H+ ion antiporter subunit Aboo_0665 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Aboo_0666 PF03334 Na+/H+ antiporter subunit Aboo_0673 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Aboo_0674 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Aboo_0674 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Aboo_0675 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Aboo_0675 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Aboo_0675 PF00374 Nickel-dependent hydrogenase Aboo_0677 PF12838 4Fe-4S dicluster domain Aboo_0677 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Aboo_0677 PF13375 RnfC Barrel sandwich hybrid domain Aboo_0678 PF10609 NUBPL iron-transfer P-loop NTPase Aboo_0680 PF00586 AIR synthase related protein, N-terminal domain Aboo_0680 PF02769 AIR synthase related protein, C-terminal domain Aboo_0681 PF01300 Telomere recombination Aboo_0681 PF17788 HypF Kae1-like domain Aboo_0681 PF07503 HypF finger Aboo_0681 PF00708 Acylphosphatase Aboo_0682 PF01924 Hydrogenase formation hypA family Aboo_0683 PF01455 HupF/HypC family Aboo_0684 PF01022 Bacterial regulatory protein, arsR family Aboo_0686 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Aboo_0686 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aboo_0689 PF04055 Radical SAM superfamily Aboo_0689 PF02310 B12 binding domain Aboo_0695 PF00330 Aconitase family (aconitate hydratase) Aboo_0697 PF02540 NAD synthase Aboo_0697 PF00795 Carbon-nitrogen hydrolase Aboo_0698 PF07690 Major Facilitator Superfamily Aboo_0699 PF02347 Glycine cleavage system P-protein Aboo_0700 PF02347 Glycine cleavage system P-protein Aboo_0701 PF02441 Flavoprotein Aboo_0702 PF00999 Sodium/hydrogen exchanger family Aboo_0704 PF01048 Phosphorylase superfamily Aboo_0706 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Aboo_0707 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase Aboo_0708 PF00483 Nucleotidyl transferase Aboo_0710 PF00923 Transaldolase/Fructose-6-phosphate aldolase Aboo_0711 PF02780 Transketolase, C-terminal domain Aboo_0711 PF02779 Transketolase, pyrimidine binding domain Aboo_0712 PF00456 Transketolase, thiamine diphosphate binding domain Aboo_0716 PF06745 KaiC Aboo_0719 PF00221 Aromatic amino acid lyase Aboo_0722 PF01523 Putative modulator of DNA gyrase Aboo_0725 PF01472 PUA domain Aboo_0725 PF00696 Amino acid kinase family Aboo_0726 PF01070 FMN-dependent dehydrogenase Aboo_0728 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aboo_0728 PF09180 Prolyl-tRNA synthetase, C-terminal Aboo_0728 PF03129 Anticodon binding domain Aboo_0730 PF13419 Haloacid dehalogenase-like hydrolase Aboo_0731 PF00155 Aminotransferase class I and II Aboo_0732 PF01370 NAD dependent epimerase/dehydratase family Aboo_0733 PF13537 Glutamine amidotransferase domain Aboo_0733 PF00733 Asparagine synthase Aboo_0734 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aboo_0734 PF03129 Anticodon binding domain Aboo_0735 PF00571 CBS domain Aboo_0735 PF00478 IMP dehydrogenase / GMP reductase domain Aboo_0736 PF13419 Haloacid dehalogenase-like hydrolase Aboo_0737 PF04055 Radical SAM superfamily Aboo_0737 PF13186 Iron-sulfur cluster-binding domain Aboo_0745 PF00885 6,7-dimethyl-8-ribityllumazine synthase Aboo_0747 PF01467 Cytidylyltransferase-like Aboo_0747 PF00294 pfkB family carbohydrate kinase Aboo_0748 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Aboo_0748 PF00925 GTP cyclohydrolase II Aboo_0749 PF00909 Ammonium Transporter Family Aboo_0754 PF00557 Metallopeptidase family M24 Aboo_0755 PF01300 Telomere recombination Aboo_0756 PF04055 Radical SAM superfamily Aboo_0756 PF01938 TRAM domain Aboo_0756 PF00919 Uncharacterized protein family UPF0004 Aboo_0759 PF00398 Ribosomal RNA adenine dimethylase Aboo_0767 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Aboo_0768 PF01171 PP-loop family Aboo_0770 PF01884 PcrB family Aboo_0771 PF01040 UbiA prenyltransferase family Aboo_0773 PF00361 Proton-conducting membrane transporter Aboo_0774 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Aboo_0776 PF00361 Proton-conducting membrane transporter Aboo_0778 PF00146 NADH dehydrogenase Aboo_0780 PF01048 Phosphorylase superfamily Aboo_0781 PF02649 Type I GTP cyclohydrolase folE2 Aboo_0784 PF00005 ABC transporter Aboo_0787 PF01964 Radical SAM ThiC family Aboo_0789 PF01137 RNA 3'-terminal phosphate cyclase Aboo_0789 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain Aboo_0791 PF06418 CTP synthase N-terminus Aboo_0791 PF00117 Glutamine amidotransferase class-I Aboo_0792 PF00534 Glycosyl transferases group 1 Aboo_0792 PF13439 Glycosyltransferase Family 4 Aboo_0794 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aboo_0795 PF03484 tRNA synthetase B5 domain Aboo_0795 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Aboo_0795 PF18262 Phe-tRNA synthetase beta subunit B1 domain Aboo_0799 PF06745 KaiC Aboo_0803 PF00009 Elongation factor Tu GTP binding domain Aboo_0803 PF09105 Elongation factor SelB, winged helix Aboo_0803 PF09106 Elongation factor SelB, winged helix Aboo_0803 PF09107 Elongation factor SelB, winged helix Aboo_0803 PF03144 Elongation factor Tu domain 2 Aboo_0806 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Aboo_0806 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Aboo_0807 PF10531 SLBB domain Aboo_0807 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Aboo_0807 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Aboo_0808 PF01568 Molydopterin dinucleotide binding domain Aboo_0808 PF00384 Molybdopterin oxidoreductase Aboo_0808 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Aboo_0808 PF12838 4Fe-4S dicluster domain Aboo_0808 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Aboo_0809 PF01979 Amidohydrolase family Aboo_0812 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Aboo_0812 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Aboo_0814 PF04675 DNA ligase N terminus Aboo_0814 PF01068 ATP dependent DNA ligase domain Aboo_0814 PF04679 ATP dependent DNA ligase C terminal region Aboo_0816 PF00005 ABC transporter Aboo_0820 PF01751 Toprim domain Aboo_0820 PF00986 DNA gyrase B subunit, carboxyl terminus Aboo_0820 PF00204 DNA gyrase B Aboo_0820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aboo_0821 PF00521 DNA gyrase/topoisomerase IV, subunit A Aboo_0821 PF03989 DNA gyrase C-terminal domain, beta-propeller Aboo_0823 PF03372 Endonuclease/Exonuclease/phosphatase family Aboo_0830 PF00005 ABC transporter Aboo_0831 PF00175 Oxidoreductase NAD-binding domain Aboo_0831 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Aboo_0832 PF01180 Dihydroorotate dehydrogenase Aboo_0833 PF18146 Damage-inducible protein CinA KH domain Aboo_0833 PF00994 Probable molybdopterin binding domain Aboo_0833 PF02464 Competence-damaged protein Aboo_0834 PF00293 NUDIX domain Aboo_0834 PF01467 Cytidylyltransferase-like Aboo_0836 PF00156 Phosphoribosyl transferase domain Aboo_0837 PF00156 Phosphoribosyl transferase domain Aboo_0842 PF00528 Binding-protein-dependent transport system inner membrane component Aboo_0843 PF00528 Binding-protein-dependent transport system inner membrane component Aboo_0843 PF12911 N-terminal TM domain of oligopeptide transport permease C Aboo_0844 PF00005 ABC transporter Aboo_0844 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aboo_0845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aboo_0845 PF00005 ABC transporter Aboo_0846 PF01336 OB-fold nucleic acid binding domain Aboo_0846 PF00152 tRNA synthetases class II (D, K and N) Aboo_0847 PF00133 tRNA synthetases class I (I, L, M and V) Aboo_0847 PF08264 Anticodon-binding domain of tRNA Aboo_0850 PF01808 AICARFT/IMPCHase bienzyme Aboo_0850 PF02142 MGS-like domain Aboo_0851 PF01339 CheB methylesterase Aboo_0851 PF00072 Response regulator receiver domain Aboo_0855 PF02463 RecF/RecN/SMC N terminal domain Aboo_0862 PF00687 Ribosomal protein L1p/L10e family Aboo_0863 PF00298 Ribosomal protein L11, RNA binding domain Aboo_0863 PF03946 Ribosomal protein L11, N-terminal domain Aboo_0866 PF12327 FtsZ family, C-terminal domain Aboo_0866 PF00091 Tubulin/FtsZ family, GTPase domain Aboo_0867 PF02254 TrkA-N domain Aboo_0867 PF00999 Sodium/hydrogen exchanger family Aboo_0867 PF02080 TrkA-C domain Aboo_0869 PF00293 NUDIX domain Aboo_0871 PF03749 Sugar fermentation stimulation protein RE domain Aboo_0871 PF17746 SfsA N-terminal OB domain Aboo_0873 PF00301 Rubredoxin Aboo_0873 PF01613 Flavin reductase like domain Aboo_0875 PF00301 Rubredoxin Aboo_0876 PF00753 Metallo-beta-lactamase superfamily Aboo_0876 PF00258 Flavodoxin Aboo_0877 PF00578 AhpC/TSA family Aboo_0878 PF02915 Rubrerythrin Aboo_0879 PF00210 Ferritin-like domain Aboo_0880 PF01880 Desulfoferrodoxin Aboo_0883 PF00578 AhpC/TSA family Aboo_0883 PF10417 C-terminal domain of 1-Cys peroxiredoxin Aboo_0885 PF03009 Glycerophosphoryl diester phosphodiesterase family Aboo_0887 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain Aboo_0887 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Aboo_0894 PF01931 Protein of unknown function DUF84 Aboo_0897 PF00005 ABC transporter Aboo_0898 PF01458 Uncharacterized protein family (UPF0051) Aboo_0903 PF00106 short chain dehydrogenase Aboo_0905 PF00293 NUDIX domain Aboo_0908 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family Aboo_0909 PF01883 Iron-sulfur cluster assembly protein Aboo_0912 PF00586 AIR synthase related protein, N-terminal domain Aboo_0912 PF02769 AIR synthase related protein, C-terminal domain Aboo_0912 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Aboo_0916 PF03477 ATP cone domain Aboo_0916 PF00317 Ribonucleotide reductase, all-alpha domain Aboo_0916 PF02867 Ribonucleotide reductase, barrel domain Aboo_0917 PF00448 SRP54-type protein, GTPase domain Aboo_0917 PF02881 SRP54-type protein, helical bundle domain Aboo_0917 PF02978 Signal peptide binding domain Aboo_0920 PF12911 N-terminal TM domain of oligopeptide transport permease C Aboo_0920 PF00528 Binding-protein-dependent transport system inner membrane component Aboo_0921 PF00528 Binding-protein-dependent transport system inner membrane component Aboo_0925 PF00091 Tubulin/FtsZ family, GTPase domain Aboo_0925 PF12327 FtsZ family, C-terminal domain Aboo_0927 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Aboo_0927 PF03483 B3/4 domain Aboo_0927 PF03484 tRNA synthetase B5 domain Aboo_0927 PF03147 Ferredoxin-fold anticodon binding domain Aboo_0927 PF01588 Putative tRNA binding domain Aboo_0930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Aboo_0930 PF00753 Metallo-beta-lactamase superfamily Aboo_0930 PF10996 Beta-Casp domain Aboo_0933 PF02001 Protein of unknown function DUF134 Aboo_0934 PF03030 Inorganic H+ pyrophosphatase Aboo_0935 PF00924 Mechanosensitive ion channel Aboo_0939 PF00809 Pterin binding enzyme Aboo_0940 PF00860 Permease family Aboo_0941 PF01411 tRNA synthetases class II (A) Aboo_0941 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Aboo_0941 PF02272 DHHA1 domain Aboo_0942 PF11987 Translation-initiation factor 2 Aboo_0942 PF04760 Translation initiation factor IF-2, N-terminal region Aboo_0942 PF03144 Elongation factor Tu domain 2 Aboo_0942 PF00009 Elongation factor Tu GTP binding domain Aboo_0944 PF02237 Biotin protein ligase C terminal domain Aboo_0944 PF03099 Biotin/lipoate A/B protein ligase family Aboo_0946 PF02887 Pyruvate kinase, alpha/beta domain Aboo_0946 PF00391 PEP-utilising enzyme, mobile domain Aboo_0946 PF00224 Pyruvate kinase, barrel domain Aboo_0951 PF01751 Toprim domain Aboo_0951 PF00270 DEAD/DEAH box helicase Aboo_0951 PF17915 Reverse gyrase zinc finger Aboo_0951 PF01131 DNA topoisomerase Aboo_0954 PF08241 Methyltransferase domain Aboo_0955 PF13087 AAA domain Aboo_0955 PF13195 Protein of unknown function (DUF4011) Aboo_0955 PF13086 AAA domain Aboo_0956 PF01351 Ribonuclease HII Aboo_0957 PF01209 ubiE/COQ5 methyltransferase family Aboo_0958 PF01018 GTP1/OBG Aboo_0958 PF09269 Domain of unknown function (DUF1967) Aboo_0958 PF01926 50S ribosome-binding GTPase Aboo_0959 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Aboo_0959 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aboo_0961 PF00132 Bacterial transferase hexapeptide (six repeats) Aboo_0964 PF00091 Tubulin/FtsZ family, GTPase domain Aboo_0964 PF12327 FtsZ family, C-terminal domain Aboo_0966 PF01139 tRNA-splicing ligase RtcB Aboo_0968 PF06857 Malonate decarboxylase delta subunit (MdcD) Aboo_0969 PF03328 HpcH/HpaI aldolase/citrate lyase family Aboo_0970 PF04223 Citrate lyase, alpha subunit (CitF) Aboo_0974 PF01112 Asparaginase Aboo_0976 PF02754 Cysteine-rich domain Aboo_0977 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Aboo_0977 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aboo_0977 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Aboo_0982 PF00890 FAD binding domain Aboo_0982 PF02910 Fumarate reductase flavoprotein C-term Aboo_0984 PF11870 Domain of unknown function (DUF3390) Aboo_0984 PF13183 4Fe-4S dicluster domain Aboo_0984 PF02589 LUD domain Aboo_0985 PF03949 Malic enzyme, NAD binding domain Aboo_0985 PF00390 Malic enzyme, N-terminal domain Aboo_0986 PF08442 ATP-grasp domain Aboo_0986 PF00549 CoA-ligase Aboo_0987 PF00549 CoA-ligase Aboo_0987 PF02629 CoA binding domain Aboo_0989 PF01980 tRNA-methyltransferase O Aboo_0990 PF05681 Fumarate hydratase (Fumerase) Aboo_0991 PF05683 Fumarase C-terminus Aboo_0992 PF07690 Major Facilitator Superfamily Aboo_1010 PF07728 AAA domain (dynein-related subfamily) Aboo_1010 PF12102 Domain of unknown function (DUF3578) Aboo_1018 PF09827 CRISPR associated protein Cas2 Aboo_1019 PF01867 CRISPR associated protein Cas1 Aboo_1024 PF03787 RAMP superfamily Aboo_1026 PF03787 RAMP superfamily Aboo_1028 PF01966 HD domain Aboo_1028 PF18211 Csm1 subunit domain B Aboo_1034 PF12706 Beta-lactamase superfamily domain Aboo_1034 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Aboo_1034 PF17770 Ribonuclease J C-terminal domain Aboo_1037 PF00149 Calcineurin-like phosphoesterase Aboo_1050 PF01381 Helix-turn-helix Aboo_1055 PF01555 DNA methylase Aboo_1075 PF01434 Peptidase family M41 Aboo_1075 PF17862 AAA+ lid domain Aboo_1075 PF00004 ATPase family associated with various cellular activities (AAA) Aboo_1075 PF06480 FtsH Extracellular Aboo_1082 PF00072 Response regulator receiver domain Aboo_1082 PF00486 Transcriptional regulatory protein, C terminal Aboo_1084 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Aboo_1084 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Aboo_1086 PF00293 NUDIX domain Aboo_1086 PF13344 Haloacid dehalogenase-like hydrolase Aboo_1089 PF04997 RNA polymerase Rpb1, domain 1 Aboo_1089 PF00623 RNA polymerase Rpb1, domain 2 Aboo_1089 PF04983 RNA polymerase Rpb1, domain 3 Aboo_1089 PF04998 RNA polymerase Rpb1, domain 5 Aboo_1089 PF05000 RNA polymerase Rpb1, domain 4 Aboo_1090 PF00623 RNA polymerase Rpb1, domain 2 Aboo_1090 PF04983 RNA polymerase Rpb1, domain 3 Aboo_1090 PF05000 RNA polymerase Rpb1, domain 4 Aboo_1090 PF04998 RNA polymerase Rpb1, domain 5 Aboo_1090 PF04997 RNA polymerase Rpb1, domain 1 Aboo_1091 PF04563 RNA polymerase beta subunit Aboo_1091 PF04561 RNA polymerase Rpb2, domain 2 Aboo_1091 PF10385 RNA polymerase beta subunit external 1 domain Aboo_1091 PF00562 RNA polymerase Rpb2, domain 6 Aboo_1091 PF04560 RNA polymerase Rpb2, domain 7 Aboo_1091 PF04565 RNA polymerase Rpb2, domain 3 Aboo_1094 PF01219 Prokaryotic diacylglycerol kinase Aboo_1100 PF02843 Phosphoribosylglycinamide synthetase, C domain Aboo_1100 PF02844 Phosphoribosylglycinamide synthetase, N domain Aboo_1100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Aboo_1101 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Aboo_1101 PF01676 Metalloenzyme superfamily Aboo_1103 PF02151 UvrB/uvrC motif Aboo_1103 PF01541 GIY-YIG catalytic domain Aboo_1103 PF08459 UvrC Helix-hairpin-helix N-terminal Aboo_1103 PF12826 Helix-hairpin-helix motif Aboo_1105 PF02742 Iron dependent repressor, metal binding and dimerisation domain Aboo_1105 PF01325 Iron dependent repressor, N-terminal DNA binding domain Aboo_1106 PF03099 Biotin/lipoate A/B protein ligase family Aboo_1108 PF01189 16S rRNA methyltransferase RsmB/F Aboo_1108 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Aboo_1108 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF Aboo_1110 PF02568 Thiamine biosynthesis protein (ThiI) Aboo_1110 PF02926 THUMP domain Aboo_1113 PF00474 Sodium:solute symporter family Aboo_1115 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Aboo_1115 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Aboo_1117 PF01938 TRAM domain Aboo_1117 PF02475 Met-10+ like-protein Aboo_1117 PF05958 tRNA (Uracil-5-)-methyltransferase Aboo_1120 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Aboo_1120 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Aboo_1121 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Aboo_1121 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Aboo_1125 PF00348 Polyprenyl synthetase Aboo_1128 PF00005 ABC transporter Aboo_1129 PF00326 Prolyl oligopeptidase family Aboo_1129 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Aboo_1130 PF01966 HD domain Aboo_1131 PF00118 TCP-1/cpn60 chaperonin family Aboo_1132 PF02590 Predicted SPOUT methyltransferase Aboo_1135 PF07837 Formiminotransferase domain, N-terminal subdomain Aboo_1135 PF02971 Formiminotransferase domain Aboo_1136 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Aboo_1136 PF01411 tRNA synthetases class II (A) Aboo_1136 PF02272 DHHA1 domain Aboo_1137 PF01813 ATP synthase subunit D Aboo_1139 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Aboo_1142 PF01554 MatE Aboo_1144 PF01171 PP-loop family Aboo_1147 PF01384 Phosphate transporter family Aboo_1148 PF00293 NUDIX domain Aboo_1152 PF00013 KH domain Aboo_1152 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Aboo_1152 PF01138 3' exoribonuclease family, domain 1 Aboo_1152 PF00575 S1 RNA binding domain Aboo_1152 PF03725 3' exoribonuclease family, domain 2 Aboo_1155 PF01018 GTP1/OBG Aboo_1155 PF01926 50S ribosome-binding GTPase Aboo_1155 PF04055 Radical SAM superfamily Aboo_1156 PF02769 AIR synthase related protein, C-terminal domain Aboo_1156 PF00586 AIR synthase related protein, N-terminal domain Aboo_1158 PF00689 Cation transporting ATPase, C-terminus Aboo_1158 PF00690 Cation transporter/ATPase, N-terminus Aboo_1160 PF03477 ATP cone domain Aboo_1160 PF02867 Ribonucleotide reductase, barrel domain Aboo_1160 PF00317 Ribonucleotide reductase, all-alpha domain Aboo_1161 PF00483 Nucleotidyl transferase Aboo_1162 PF00206 Lyase Aboo_1162 PF10397 Adenylosuccinate lyase C-terminus Aboo_1169 PF00708 Acylphosphatase Aboo_1173 PF02540 NAD synthase Aboo_1178 PF08264 Anticodon-binding domain of tRNA Aboo_1178 PF00133 tRNA synthetases class I (I, L, M and V) Aboo_1184 PF13344 Haloacid dehalogenase-like hydrolase Aboo_1185 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aboo_1191 PF00696 Amino acid kinase family Aboo_1193 PF00072 Response regulator receiver domain Aboo_1195 PF01507 Phosphoadenosine phosphosulfate reductase family Aboo_1201 PF12557 Cob(I)alamin adenosyltransferase N terminal Aboo_1201 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Aboo_1202 PF00924 Mechanosensitive ion channel Aboo_1202 PF05552 Conserved TM helix Aboo_1203 PF04055 Radical SAM superfamily Aboo_1203 PF06463 Molybdenum Cofactor Synthesis C Aboo_1217 PF00589 Phage integrase family Aboo_1217 PF02899 Phage integrase, N-terminal SAM-like domain Aboo_1219 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Aboo_1219 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Aboo_1220 PF05496 Holliday junction DNA helicase RuvB P-loop domain Aboo_1220 PF05491 RuvB C-terminal winged helix domain Aboo_1220 PF17864 RuvB AAA lid domain Aboo_1223 PF08494 DEAD/H associated Aboo_1223 PF00271 Helicase conserved C-terminal domain Aboo_1223 PF00270 DEAD/DEAH box helicase Aboo_1224 PF00710 Asparaginase, N-terminal Aboo_1224 PF17763 Glutaminase/Asparaginase C-terminal domain Aboo_1225 PF02934 GatB/GatE catalytic domain Aboo_1225 PF02637 GatB domain Aboo_1228 PF01066 CDP-alcohol phosphatidyltransferase Aboo_1228 PF00483 Nucleotidyl transferase Aboo_1230 PF00682 HMGL-like Aboo_1230 PF02436 Conserved carboxylase domain Aboo_1230 PF00364 Biotin-requiring enzyme Aboo_1232 PF01523 Putative modulator of DNA gyrase Aboo_1233 PF01523 Putative modulator of DNA gyrase Aboo_1234 PF00571 CBS domain Aboo_1235 PF12327 FtsZ family, C-terminal domain Aboo_1235 PF00091 Tubulin/FtsZ family, GTPase domain Aboo_1239 PF00334 Nucleoside diphosphate kinase Aboo_1240 PF01142 tRNA pseudouridine synthase D (TruD) Aboo_1242 PF00005 ABC transporter Aboo_1243 PF02361 Cobalt transport protein Aboo_1251 PF00005 ABC transporter Aboo_1251 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aboo_1252 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aboo_1252 PF00005 ABC transporter Aboo_1253 PF12911 N-terminal TM domain of oligopeptide transport permease C Aboo_1253 PF00528 Binding-protein-dependent transport system inner membrane component Aboo_1255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aboo_1259 PF02881 SRP54-type protein, helical bundle domain Aboo_1259 PF00448 SRP54-type protein, GTPase domain Aboo_1260 PF00291 Pyridoxal-phosphate dependent enzyme Aboo_1261 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aboo_1261 PF02874 ATP synthase alpha/beta family, beta-barrel domain Aboo_1262 PF02874 ATP synthase alpha/beta family, beta-barrel domain Aboo_1262 PF16886 ATPsynthase alpha/beta subunit N-term extension Aboo_1262 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aboo_1267 PF01496 V-type ATPase 116kDa subunit family Aboo_1269 PF03746 LamB/YcsF family Aboo_1270 PF02682 Carboxyltransferase domain, subdomain C and D Aboo_1271 PF02626 Carboxyltransferase domain, subdomain A and B Aboo_1272 PF01168 Alanine racemase, N-terminal domain Aboo_1273 PF01470 Pyroglutamyl peptidase Aboo_1274 PF00005 ABC transporter Aboo_1274 PF00664 ABC transporter transmembrane region Aboo_1275 PF00664 ABC transporter transmembrane region Aboo_1275 PF00005 ABC transporter Aboo_1278 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aboo_1282 PF00999 Sodium/hydrogen exchanger family Aboo_1286 PF04055 Radical SAM superfamily Aboo_1286 PF18693 TRAM domain Aboo_1286 PF00919 Uncharacterized protein family UPF0004 Aboo_1288 PF04055 Radical SAM superfamily Aboo_1289 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aboo_1290 PF00857 Isochorismatase family Aboo_1291 PF01979 Amidohydrolase family Aboo_1293 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) Aboo_1294 PF02547 Queuosine biosynthesis protein Aboo_1297 PF01967 MoaC family Aboo_1298 PF00994 Probable molybdopterin binding domain Aboo_1300 PF02127 Aminopeptidase I zinc metalloprotease (M18) Aboo_1301 PF01875 Memo-like protein Aboo_1302 PF00318 Ribosomal protein S2 Aboo_1303 PF03952 Enolase, N-terminal domain Aboo_1303 PF00113 Enolase, C-terminal TIM barrel domain Aboo_1308 PF00571 CBS domain Aboo_1308 PF00478 IMP dehydrogenase / GMP reductase domain Aboo_1311 PF08543 Phosphomethylpyrimidine kinase Aboo_1314 PF00857 Isochorismatase family Aboo_1316 PF03104 DNA polymerase family B, exonuclease domain Aboo_1316 PF00136 DNA polymerase family B Aboo_1318 PF00437 Type II/IV secretion system protein Aboo_1319 PF18073 Rubredoxin metal binding domain Aboo_1323 PF08544 GHMP kinases C terminal Aboo_1323 PF00288 GHMP kinases N terminal domain Aboo_1328 PF01597 Glycine cleavage H-protein Aboo_1329 PF01728 FtsJ-like methyltransferase Aboo_1332 PF00485 Phosphoribulokinase / Uridine kinase family Aboo_1333 PF07669 Eco57I restriction-modification methylase Aboo_1336 PF00795 Carbon-nitrogen hydrolase Aboo_1337 PF09825 Biotin-protein ligase, N terminal Aboo_1338 PF00005 ABC transporter Aboo_1338 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aboo_1339 PF00005 ABC transporter Aboo_1339 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aboo_1341 PF00528 Binding-protein-dependent transport system inner membrane component Aboo_1342 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aboo_1343 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Aboo_1343 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Aboo_1344 PF00202 Aminotransferase class-III Aboo_1346 PF01680 SOR/SNZ family Aboo_1347 PF01025 GrpE Aboo_1348 PF00012 Hsp70 protein Aboo_1349 PF09828 Chromate resistance exported protein Aboo_1350 PF00684 DnaJ central domain Aboo_1350 PF01556 DnaJ C terminal domain Aboo_1350 PF00226 DnaJ domain Aboo_1354 PF03600 Citrate transporter Aboo_1359 PF02310 B12 binding domain Aboo_1363 PF01039 Carboxyl transferase domain Aboo_1365 PF00364 Biotin-requiring enzyme Aboo_1366 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Aboo_1367 PF00005 ABC transporter Aboo_1368 PF02361 Cobalt transport protein Aboo_1370 PF13190 PDGLE domain Aboo_1370 PF01891 Cobalt uptake substrate-specific transmembrane region Aboo_1371 PF08753 NikR C terminal nickel binding domain Aboo_1371 PF01402 Ribbon-helix-helix protein, copG family Aboo_1381 PF02463 RecF/RecN/SMC N terminal domain Aboo_1381 PF06470 SMC proteins Flexible Hinge Domain Aboo_1384 PF01434 Peptidase family M41 Aboo_1384 PF06480 FtsH Extracellular Aboo_1384 PF17862 AAA+ lid domain Aboo_1384 PF00004 ATPase family associated with various cellular activities (AAA) Aboo_1389 PF00156 Phosphoribosyl transferase domain Aboo_1389 PF13537 Glutamine amidotransferase domain Aboo_1393 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Aboo_1394 PF05362 Lon protease (S16) C-terminal proteolytic domain Aboo_1394 PF00004 ATPase family associated with various cellular activities (AAA) Aboo_1396 PF00416 Ribosomal protein S13/S18 Aboo_1397 PF00163 Ribosomal protein S4/S9 N-terminal domain Aboo_1397 PF01479 S4 domain Aboo_1398 PF00411 Ribosomal protein S11 Aboo_1403 PF12857 TOBE-like domain Aboo_1403 PF17850 CysA C-terminal regulatory domain Aboo_1403 PF00005 ABC transporter Aboo_1404 PF00528 Binding-protein-dependent transport system inner membrane component Aboo_1407 PF01871 AMMECR1 Aboo_1407 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Aboo_1408 PF00004 ATPase family associated with various cellular activities (AAA) Aboo_1408 PF05362 Lon protease (S16) C-terminal proteolytic domain Aboo_1408 PF02190 ATP-dependent protease La (LON) substrate-binding domain Aboo_1410 PF01702 Queuine tRNA-ribosyltransferase Aboo_1415 PF01661 Macro domain Aboo_1415 PF12002 MgsA AAA+ ATPase C terminal Aboo_1415 PF16193 AAA C-terminal domain Aboo_1415 PF05496 Holliday junction DNA helicase RuvB P-loop domain Aboo_1416 PF01183 Glycosyl hydrolases family 25 Aboo_1416 PF08239 Bacterial SH3 domain Aboo_1417 PF00156 Phosphoribosyl transferase domain Aboo_1420 PF00266 Aminotransferase class-V Aboo_1421 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aboo_1421 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Aboo_1423 PF03951 Glutamine synthetase, beta-Grasp domain Aboo_1423 PF00120 Glutamine synthetase, catalytic domain Aboo_1424 PF12706 Beta-lactamase superfamily domain Aboo_1429 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aboo_1429 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aboo_1434 PF00155 Aminotransferase class I and II Aboo_1435 PF03951 Glutamine synthetase, beta-Grasp domain Aboo_1435 PF00120 Glutamine synthetase, catalytic domain Aboo_1436 PF00282 Pyridoxal-dependent decarboxylase conserved domain Aboo_1437 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Aboo_1438 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Aboo_1438 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Aboo_1441 PF01546 Peptidase family M20/M25/M40 Aboo_1441 PF07687 Peptidase dimerisation domain Aboo_1447 PF01411 tRNA synthetases class II (A) Aboo_1447 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Aboo_1447 PF02272 DHHA1 domain Aboo_1448 PF01979 Amidohydrolase family Aboo_1449 PF01871 AMMECR1 Aboo_1450 PF04055 Radical SAM superfamily Aboo_1453 PF00557 Metallopeptidase family M24 Aboo_1453 PF01321 Creatinase/Prolidase N-terminal domain Aboo_1454 PF01554 MatE Aboo_1456 PF00586 AIR synthase related protein, N-terminal domain Aboo_1456 PF02769 AIR synthase related protein, C-terminal domain Aboo_1460 PF00293 NUDIX domain Aboo_1461 PF00368 Hydroxymethylglutaryl-coenzyme A reductase Aboo_1463 PF00180 Isocitrate/isopropylmalate dehydrogenase Aboo_1463 PF18324 Hypothetical protein TT1725 Aboo_1465 PF00694 Aconitase C-terminal domain Aboo_1466 PF00330 Aconitase family (aconitate hydratase) Aboo_1467 PF00285 Citrate synthase, C-terminal domain Aboo_1468 PF01979 Amidohydrolase family Aboo_1469 PF09334 tRNA synthetases class I (M) Aboo_1469 PF00133 tRNA synthetases class I (I, L, M and V) Aboo_1469 PF13603 Leucyl-tRNA synthetase, Domain 2 Aboo_1469 PF08264 Anticodon-binding domain of tRNA Aboo_1472 PF16868 NMT1-like family Aboo_1474 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Aboo_1475 PF00572 Ribosomal protein L13 Aboo_1476 PF00380 Ribosomal protein S9/S16 Aboo_1478 PF01624 MutS domain I Aboo_1478 PF05190 MutS family domain IV Aboo_1478 PF00488 MutS domain V Aboo_1478 PF05188 MutS domain II Aboo_1478 PF05192 MutS domain III Aboo_1484 PF00005 ABC transporter Aboo_1484 PF09383 NIL domain Aboo_1494 PF16198 tRNA pseudouridylate synthase B C-terminal domain Aboo_1494 PF01509 TruB family pseudouridylate synthase (N terminal domain) Aboo_1495 PF05191 Adenylate kinase, active site lid Aboo_1498 PF00344 SecY translocase Aboo_1501 PF03719 Ribosomal protein S5, C-terminal domain Aboo_1501 PF00333 Ribosomal protein S5, N-terminal domain Aboo_1505 PF00347 Ribosomal protein L6 Aboo_1506 PF00410 Ribosomal protein S8 Aboo_1507 PF00253 Ribosomal protein S14p/S29e Aboo_1508 PF00281 Ribosomal protein L5 Aboo_1508 PF00673 ribosomal L5P family C-terminus Aboo_1510 PF00467 KOW motif Aboo_1510 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Aboo_1511 PF00238 Ribosomal protein L14p/L23e Aboo_1512 PF00366 Ribosomal protein S17 Aboo_1514 PF00831 Ribosomal L29 protein Aboo_1515 PF07650 KH domain Aboo_1515 PF00189 Ribosomal protein S3, C-terminal domain Aboo_1516 PF00237 Ribosomal protein L22p/L17e Aboo_1517 PF00203 Ribosomal protein S19 Aboo_1518 PF00181 Ribosomal Proteins L2, RNA binding domain Aboo_1518 PF03947 Ribosomal Proteins L2, C-terminal domain Aboo_1519 PF00276 Ribosomal protein L23 Aboo_1521 PF00297 Ribosomal protein L3 Aboo_1522 PF17392 Urocanase C-terminal domain Aboo_1522 PF01175 Urocanase Rossmann-like domain Aboo_1522 PF17391 Urocanase N-terminal domain Aboo_1524 PF01230 HIT domain Aboo_1525 PF01416 tRNA pseudouridine synthase Aboo_1529 PF07676 WD40-like Beta Propeller Repeat Aboo_1529 PF00326 Prolyl oligopeptidase family Aboo_1531 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aboo_1532 PF01266 FAD dependent oxidoreductase Aboo_1533 PF05697 Bacterial trigger factor protein (TF) Aboo_1533 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Aboo_1533 PF05698 Bacterial trigger factor protein (TF) C-terminus Aboo_1535 PF11495 Archaeal transcriptional regulator TrmB Aboo_1535 PF01978 Sugar-specific transcriptional regulator TrmB Aboo_1536 PF00072 Response regulator receiver domain Aboo_1537 PF07969 Amidohydrolase family Aboo_1538 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Aboo_1538 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Aboo_1538 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Aboo_1538 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Aboo_1540 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Aboo_1540 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Aboo_1543 PF03061 Thioesterase superfamily Aboo_1543 PF01008 Initiation factor 2 subunit family Aboo_1547 PF05221 S-adenosyl-L-homocysteine hydrolase Aboo_1547 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Aboo_1548 PF07690 Major Facilitator Superfamily Aboo_1549 PF02875 Mur ligase family, glutamate ligase domain Aboo_1549 PF08245 Mur ligase middle domain Aboo_1550 PF13167 GTP-binding GTPase N-terminal Aboo_1550 PF16360 GTP-binding GTPase Middle Region Aboo_1550 PF01926 50S ribosome-binding GTPase