AciM339_0001 SM00382 ATPases associated with a variety of cellular activities AciM339_0001 SM01074 CDC6, C terminal AciM339_0003 SM01376 AciM339_0003 AciM339_0014 SM00460 Transglutaminase/protease-like homologues AciM339_0025 SM01413 AciM339_0025 AciM339_0028 SM01380 AciM339_0028 AciM339_0029 SM00654 translation initiation factor 6 AciM339_0074 SM00849 Metallo-beta-lactamase superfamily AciM339_0074 SM01027 Beta-Casp domain AciM339_0075 SM01409 AciM339_0075 AciM339_0079 SM00864 Tubulin/FtsZ family, GTPase domain AciM339_0079 SM00865 Tubulin/FtsZ family, C-terminal domain AciM339_0081 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AciM339_0082 SM00486 DNA polymerase type-B family AciM339_0083 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_0085 SM00382 ATPases associated with a variety of cellular activities AciM339_0085 SM00962 SRP54-type protein, GTPase domain AciM339_0085 SM00963 SRP54-type protein, helical bundle domain AciM339_0092 SM01211 AciM339_0092 AciM339_0103 SM00822 AciM339_0103 AciM339_0109 SM00060 Fibronectin type 3 domain AciM339_0109 SM00710 Parallel beta-helix repeats AciM339_0112 SM00564 beta-propeller repeat AciM339_0114 SM00888 EF-1 guanine nucleotide exchange domain AciM339_0134 SM00849 Metallo-beta-lactamase superfamily AciM339_0137 SM00903 Flavin reductase like domain AciM339_0138 SM00344 helix_turn_helix ASNC type AciM339_0142 SM00864 Tubulin/FtsZ family, GTPase domain AciM339_0142 SM00865 Tubulin/FtsZ family, C-terminal domain AciM339_0144 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AciM339_0144 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AciM339_0145 SM00649 Ribosomal protein L11/L12 AciM339_0150 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AciM339_0151 SM00028 Tetratricopeptide repeats AciM339_0151 SM00386 HAT (Half-A-TPR) repeats AciM339_0155 SM00798 AICARFT/IMPCHase bienzyme AciM339_0155 SM00851 MGS-like domain AciM339_0160 SM00382 ATPases associated with a variety of cellular activities AciM339_0161 SM00382 ATPases associated with a variety of cellular activities AciM339_0182 SM00857 Resolvase, N terminal domain AciM339_0214 SM00857 Resolvase, N terminal domain AciM339_0240 SM00382 ATPases associated with a variety of cellular activities AciM339_0248 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_0249 SM00434 DNA Topoisomerase IV AciM339_0250 SM00387 Histidine kinase-like ATPases AciM339_0250 SM00433 TopoisomeraseII AciM339_0254 SM00382 ATPases associated with a variety of cellular activities AciM339_0264 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain AciM339_0268 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AciM339_0269 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AciM339_0274 SM01405 AciM339_0274 AciM339_0281 SM00873 B3/4 domain AciM339_0281 SM00874 tRNA synthetase B5 domain AciM339_0282 SM00634 Bacterial Ig-like domain (group 1) AciM339_0292 SM00060 Fibronectin type 3 domain AciM339_0292 SM00645 Papain family cysteine protease AciM339_0292 SM00710 Parallel beta-helix repeats AciM339_0304 SM00650 Ribosomal RNA adenine dimethylases AciM339_0307 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_0310 SM00933 AciM339_0310 AciM339_0324 SM00382 ATPases associated with a variety of cellular activities AciM339_0330 SM00116 Domain in cystathionine beta-synthase and other proteins. AciM339_0337 SM00946 Prolyl-tRNA synthetase, C-terminal AciM339_0338 SM00093 SERine Proteinase INhibitors AciM339_0339 SM00709 Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins. AciM339_0347 SM00530 Helix-turn-helix XRE-family like proteins AciM339_0354 SM00861 Transketolase, pyrimidine binding domain AciM339_0367 SM00344 helix_turn_helix ASNC type AciM339_0383 SM00651 snRNP Sm proteins AciM339_0387 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_0397 SM00518 AP endonuclease family 2 AciM339_0403 SM01397 AciM339_0403 AciM339_0412 SM01118 AciM339_0412 AciM339_0414 SM00322 K homology RNA-binding domain AciM339_0414 SM00382 ATPases associated with a variety of cellular activities AciM339_0414 SM00670 Large family of predicted nucleotide-binding domains AciM339_0430 SM00385 domain present in cyclins, TFIIB and Retinoblastoma AciM339_0431 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_0432 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_0439 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciM339_0457 SM00864 Tubulin/FtsZ family, GTPase domain AciM339_0457 SM00865 Tubulin/FtsZ family, C-terminal domain AciM339_0463 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciM339_0463 SM00419 helix_turn_helix, cAMP Regulatory protein AciM339_0473 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AciM339_0475 SM00173 Ras subfamily of RAS small GTPases AciM339_0475 SM00175 Rab subfamily of small GTPases AciM339_0477 SM00564 beta-propeller repeat AciM339_0479 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AciM339_0481 SM00316 Ribosomal protein S1-like RNA-binding domain AciM339_0482 SM01389 AciM339_0482 AciM339_0485 SM01402 AciM339_0485 AciM339_0487 SM00836 DALR anticodon binding domain AciM339_0487 SM01016 Arginyl tRNA synthetase N terminal dom AciM339_0493 SM00382 ATPases associated with a variety of cellular activities AciM339_0512 SM00028 Tetratricopeptide repeats AciM339_0513 SM00028 Tetratricopeptide repeats AciM339_0522 SM00710 Parallel beta-helix repeats AciM339_0532 SM01407 AciM339_0532 AciM339_0537 SM00382 ATPases associated with a variety of cellular activities AciM339_0540 SM00244 prohibitin homologues AciM339_0543 SM00487 DEAD-like helicases superfamily AciM339_0543 SM00490 helicase superfamily c-terminal domain AciM339_0551 SM00382 ATPases associated with a variety of cellular activities AciM339_0552 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AciM339_0552 SM00475 5'-3' exonuclease AciM339_0552 SM00484 Xeroderma pigmentosum G I-region AciM339_0552 SM00485 Xeroderma pigmentosum G N-region AciM339_0555 SM01001 AIR carboxylase AciM339_0563 SM00465 GIY-YIG type nucleases (URI domain) AciM339_0564 SM00382 ATPases associated with a variety of cellular activities AciM339_0567 SM00478 endonuclease III AciM339_0568 SM00385 domain present in cyclins, TFIIB and Retinoblastoma AciM339_0570 SM00028 Tetratricopeptide repeats AciM339_0570 SM00386 HAT (Half-A-TPR) repeats AciM339_0581 SM00287 Bacterial SH3 domain homologues AciM339_0581 SM00641 Glycosyl hydrolases family 25 AciM339_0588 SM00481 DNA polymerase alpha chain like domain AciM339_0590 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AciM339_0596 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AciM339_0598 SM00448 cheY-homologous receiver domain AciM339_0600 SM00028 Tetratricopeptide repeats AciM339_0600 SM00382 ATPases associated with a variety of cellular activities AciM339_0615 SM00899 AciM339_0615 AciM339_0618 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AciM339_0619 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AciM339_0619 SM00382 ATPases associated with a variety of cellular activities AciM339_0621 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain AciM339_0626 SM00411 bacterial (prokaryotic) histone like domain AciM339_0637 SM00382 ATPases associated with a variety of cellular activities AciM339_0638 SM00382 ATPases associated with a variety of cellular activities AciM339_0643 SM00382 ATPases associated with a variety of cellular activities AciM339_0643 SM01072 Cell division protein 48 (CDC48) domain 2 AciM339_0643 SM01073 Cell division protein 48 (CDC48) N-terminal domain AciM339_0644 SM00062 Bacterial periplasmic substrate-binding proteins AciM339_0644 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AciM339_0645 SM00344 helix_turn_helix ASNC type AciM339_0645 SM00420 helix_turn_helix, Deoxyribose operon repressor AciM339_0646 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AciM339_0646 SM00487 DEAD-like helicases superfamily AciM339_0646 SM00490 helicase superfamily c-terminal domain AciM339_0647 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AciM339_0647 SM00891 ERCC4 domain AciM339_0648 SM00382 ATPases associated with a variety of cellular activities AciM339_0650 SM00788 Adenylosuccinate synthetase AciM339_0678 SM00478 endonuclease III AciM339_0678 SM00525 AciM339_0678 AciM339_0679 SM00344 helix_turn_helix ASNC type AciM339_0708 SM01194 AciM339_0708 AciM339_0713 SM00382 ATPases associated with a variety of cellular activities AciM339_0719 SM00382 ATPases associated with a variety of cellular activities AciM339_0721 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AciM339_0721 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AciM339_0721 SM00493 AciM339_0721 AciM339_0722 SM00730 Presenilin, signal peptide peptidase, family AciM339_0725 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AciM339_0729 SM00116 Domain in cystathionine beta-synthase and other proteins. AciM339_0729 SM01240 AciM339_0729 AciM339_0730 SM00060 Fibronectin type 3 domain AciM339_0730 SM00944 Pro-kumamolisin, activation domain AciM339_0733 SM00116 Domain in cystathionine beta-synthase and other proteins. AciM339_0734 SM00091 PAS domain AciM339_0737 SM00881 CoA binding domain AciM339_0741 SM00382 ATPases associated with a variety of cellular activities AciM339_0744 SM00881 CoA binding domain AciM339_0756 SM00155 Phospholipase D. Active site motifs. AciM339_0758 SM00849 Metallo-beta-lactamase superfamily AciM339_0768 SM00382 ATPases associated with a variety of cellular activities AciM339_0772 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AciM339_0774 SM00852 Probable molybdopterin binding domain AciM339_0786 SM00116 Domain in cystathionine beta-synthase and other proteins. AciM339_0788 SM00382 ATPases associated with a variety of cellular activities AciM339_0810 SM00481 DNA polymerase alpha chain like domain AciM339_0814 SM00984 UDP binding domain AciM339_0821 SM00028 Tetratricopeptide repeats AciM339_0831 SM00822 AciM339_0831 AciM339_0832 SM00116 Domain in cystathionine beta-synthase and other proteins. AciM339_0834 SM01022 AciM339_0834 AciM339_0838 SM00864 Tubulin/FtsZ family, GTPase domain AciM339_0839 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AciM339_0842 SM01400 AciM339_0842 AciM339_0846 SM00831 Cation transporter/ATPase, N-terminus AciM339_0850 SM00487 DEAD-like helicases superfamily AciM339_0850 SM00490 helicase superfamily c-terminal domain AciM339_0851 SM00487 DEAD-like helicases superfamily AciM339_0851 SM00488 AciM339_0851 AciM339_0851 SM00491 AciM339_0851 AciM339_0852 SM00028 Tetratricopeptide repeats AciM339_0861 SM00382 ATPases associated with a variety of cellular activities AciM339_0865 SM00948 Proteasome subunit A N-terminal signature Add an annotation AciM339_0867 SM00316 Ribosomal protein S1-like RNA-binding domain AciM339_0867 SM00322 K homology RNA-binding domain AciM339_0872 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciM339_0881 SM01329 AciM339_0881 AciM339_0882 SM00460 Transglutaminase/protease-like homologues AciM339_0891 SM00853 MutL C terminal dimerisation domain AciM339_0891 SM01340 AciM339_0891 AciM339_0892 SM01133 AciM339_0892 AciM339_0896 SM00981 AciM339_0896 AciM339_0902 SM01206 AciM339_0902 AciM339_0921 SM00155 Phospholipase D. Active site motifs. AciM339_0922 SM00529 Helix-turn-helix diphteria tox regulatory element AciM339_0923 SM00382 ATPases associated with a variety of cellular activities AciM339_0926 SM00322 K homology RNA-binding domain AciM339_0926 SM00849 Metallo-beta-lactamase superfamily AciM339_0926 SM01027 Beta-Casp domain AciM339_0928 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AciM339_0928 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AciM339_0928 SM00091 PAS domain AciM339_0928 SM00387 Histidine kinase-like ATPases AciM339_0928 SM00388 His Kinase A (phosphoacceptor) domain AciM339_0929 SM00986 Uracil DNA glycosylase superfamily AciM339_0929 SM00987 UreE urease accessory protein, C-terminal domain AciM339_0950 SM00028 Tetratricopeptide repeats AciM339_0951 SM00116 Domain in cystathionine beta-synthase and other proteins. AciM339_0954 SM00960 Roadblock/LC7 domain AciM339_0955 SM00481 DNA polymerase alpha chain like domain AciM339_0977 SM01403 AciM339_0977 AciM339_0979 SM00838 Elongation factor G C-terminus AciM339_0979 SM00889 Elongation factor G, domain IV AciM339_0986 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_0995 SM00327 von Willebrand factor (vWF) type A domain AciM339_0999 SM00382 ATPases associated with a variety of cellular activities AciM339_1001 SM00062 Bacterial periplasmic substrate-binding proteins AciM339_1001 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AciM339_1004 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AciM339_1004 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AciM339_1004 SM00487 DEAD-like helicases superfamily AciM339_1004 SM00493 AciM339_1004 AciM339_1006 SM00440 C2C2 Zinc finger AciM339_1006 SM00661 RNA polymerase subunit 9 AciM339_1008 SM00382 ATPases associated with a variety of cellular activities AciM339_1008 SM00487 DEAD-like helicases superfamily AciM339_1017 SM00864 Tubulin/FtsZ family, GTPase domain AciM339_1017 SM00865 Tubulin/FtsZ family, C-terminal domain AciM339_1036 SM00014 Acid phosphatase homologues AciM339_1042 SM01329 AciM339_1042 AciM339_1044 SM00944 Pro-kumamolisin, activation domain AciM339_1047 SM00028 Tetratricopeptide repeats AciM339_1051 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_1059 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AciM339_1071 SM01230 AciM339_1071 AciM339_1076 SM00989 AciM339_1076 AciM339_1080 SM00493 AciM339_1080 AciM339_1083 SM00849 Metallo-beta-lactamase superfamily AciM339_1092 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciM339_1095 SM01103 AciM339_1095 AciM339_1101 SM01382 AciM339_1101 AciM339_1101 SM01383 AciM339_1101 AciM339_1104 SM00322 K homology RNA-binding domain AciM339_1106 SM00538 A domain found in a protein subunit of human RNase MRP and RNase P ribonucleoprotein complexes and archaeal proteins. AciM339_1108 SM01374 AciM339_1108 AciM339_1109 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AciM339_1110 SM00363 S4 RNA-binding domain AciM339_1115 SM01393 AciM339_1115 AciM339_1116 SM01416 AciM339_1116 AciM339_1123 SM01415 AciM339_1123 AciM339_1143 SM00919 Malic enzyme, NAD binding domain AciM339_1143 SM01274 AciM339_1143 AciM339_1145 SM00881 CoA binding domain AciM339_1148 SM00382 ATPases associated with a variety of cellular activities AciM339_1176 SM00382 ATPases associated with a variety of cellular activities AciM339_1190 SM01386 AciM339_1190 AciM339_1190 SM01387 AciM339_1190 AciM339_1193 SM00968 SMC proteins Flexible Hinge Domain AciM339_1196 SM00382 ATPases associated with a variety of cellular activities AciM339_1203 SM00651 snRNP Sm proteins AciM339_1206 SM01194 AciM339_1206 AciM339_1208 SM00382 ATPases associated with a variety of cellular activities AciM339_1208 SM01072 Cell division protein 48 (CDC48) domain 2 AciM339_1208 SM01073 Cell division protein 48 (CDC48) N-terminal domain AciM339_1216 SM00487 DEAD-like helicases superfamily AciM339_1221 SM00487 DEAD-like helicases superfamily AciM339_1221 SM00490 helicase superfamily c-terminal domain AciM339_1234 SM00652 eukaryotic translation initiation factor 1A AciM339_1235 SM00090 RIO-like kinase AciM339_1236 SM00322 K homology RNA-binding domain AciM339_1241 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_1251 SM00852 Probable molybdopterin binding domain AciM339_1255 SM01192 AciM339_1255 AciM339_1255 SM01193 AciM339_1255 AciM339_1260 SM00116 Domain in cystathionine beta-synthase and other proteins. AciM339_1264 SM01377 AciM339_1264 AciM339_1269 SM00486 DNA polymerase type-B family AciM339_1272 SM00382 ATPases associated with a variety of cellular activities AciM339_1278 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciM339_1284 SM00530 Helix-turn-helix XRE-family like proteins AciM339_1285 SM00382 ATPases associated with a variety of cellular activities AciM339_1288 SM00710 Parallel beta-helix repeats AciM339_1288 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AciM339_1291 SM00271 DnaJ molecular chaperone homology domain AciM339_1293 SM01007 Class II Aldolase and Adducin N-terminal domain AciM339_1307 SM00382 ATPases associated with a variety of cellular activities AciM339_1307 SM00962 SRP54-type protein, GTPase domain AciM339_1307 SM00963 SRP54-type protein, helical bundle domain AciM339_1314 SM00382 ATPases associated with a variety of cellular activities AciM339_1315 SM00382 ATPases associated with a variety of cellular activities AciM339_1324 SM00382 ATPases associated with a variety of cellular activities AciM339_1327 SM00562 AciM339_1327 AciM339_1328 SM00746 metallochaperone-like domain AciM339_1331 SM00864 Tubulin/FtsZ family, GTPase domain AciM339_1331 SM00865 Tubulin/FtsZ family, C-terminal domain AciM339_1332 SM00116 Domain in cystathionine beta-synthase and other proteins. AciM339_1342 SM00042 Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein. AciM339_1343 SM00845 GatB domain AciM339_1344 SM00870 AciM339_1344 AciM339_1345 SM00487 DEAD-like helicases superfamily AciM339_1345 SM00490 helicase superfamily c-terminal domain AciM339_1346 SM00382 ATPases associated with a variety of cellular activities AciM339_1347 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AciM339_1357 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AciM339_1357 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AciM339_1357 SM00091 PAS domain AciM339_1357 SM00387 Histidine kinase-like ATPases AciM339_1357 SM00388 His Kinase A (phosphoacceptor) domain AciM339_1363 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_1368 SM00864 Tubulin/FtsZ family, GTPase domain AciM339_1370 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AciM339_1370 SM00534 ATPase domain of DNA mismatch repair MUTS family AciM339_1377 SM00382 ATPases associated with a variety of cellular activities AciM339_1384 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciM339_1390 SM00448 cheY-homologous receiver domain AciM339_1391 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_1394 SM00116 Domain in cystathionine beta-synthase and other proteins. AciM339_1394 SM00530 Helix-turn-helix XRE-family like proteins AciM339_1396 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_1401 SM00663 RNA polymerase I subunit A N-terminus AciM339_1413 SM01209 AciM339_1413 AciM339_1413 SM01210 AciM339_1413 AciM339_1419 SM00060 Fibronectin type 3 domain AciM339_1419 SM00710 Parallel beta-helix repeats AciM339_1419 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AciM339_1421 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AciM339_1421 SM00487 DEAD-like helicases superfamily AciM339_1421 SM00490 helicase superfamily c-terminal domain AciM339_1421 SM00891 ERCC4 domain AciM339_1431 SM00487 DEAD-like helicases superfamily AciM339_1432 SM00529 Helix-turn-helix diphteria tox regulatory element AciM339_1437 SM00981 AciM339_1437 AciM339_1442 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain AciM339_1444 SM00653 domain present in translation initiation factor eIF2B and eIF5 AciM339_1445 SM00670 Large family of predicted nucleotide-binding domains AciM339_1454 SM01384 AciM339_1454 AciM339_1457 SM00382 ATPases associated with a variety of cellular activities AciM339_1458 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AciM339_1462 SM01221 AciM339_1462 AciM339_1462 SM01222 AciM339_1462 AciM339_1463 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AciM339_1466 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AciM339_1467 SM00849 Metallo-beta-lactamase superfamily AciM339_1479 SM00316 Ribosomal protein S1-like RNA-binding domain AciM339_1482 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_1488 SM00998 Adenylosuccinate lyase C-terminus AciM339_1498 SM00729 Elongator protein 3, MiaB family, Radical SAM AciM339_1502 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain AciM339_1505 SM00350 minichromosome maintenance proteins AciM339_1513 SM00487 DEAD-like helicases superfamily AciM339_1513 SM00490 helicase superfamily c-terminal domain AciM339_1529 SM00448 cheY-homologous receiver domain AciM339_1530 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AciM339_1533 SM01230 AciM339_1533 AciM339_1537 SM00530 Helix-turn-helix XRE-family like proteins AciM339_1540 SM00506 Appr-1"-p processing enzyme AciM339_1547 SM00382 ATPases associated with a variety of cellular activities AciM339_1554 SM00382 ATPases associated with a variety of cellular activities AciM339_1557 SM00662 RNA polymerases D AciM339_1559 SM00363 S4 RNA-binding domain AciM339_1559 SM01390 AciM339_1559 AciM339_1561 SM00493 AciM339_1561 AciM339_1562 SM00382 ATPases associated with a variety of cellular activities AciM339_1569 SM00448 cheY-homologous receiver domain AciM339_1576 SM00028 Tetratricopeptide repeats AciM339_1576 SM00382 ATPases associated with a variety of cellular activities AciM339_1577 SM00996 S-adenosyl-L-homocysteine hydrolase AciM339_1577 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain