locus-tag	class	description
Aba10042_00025	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
Aba10042_00035	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Aba10042_00050	COG4942	peptidase
Aba10042_00060	COG0508	dehydrogenase complex catalyzes the overall conversion of
Aba10042_00070	COG2119	membrane
Aba10042_00085	COG3150	esterase
Aba10042_00095	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_00100	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
Aba10042_00110	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba10042_00120	COG2233	PERMEase
Aba10042_00125	COG2351	hydroxyisourate hydrolase activity
Aba10042_00160	COG3706	GGDEF domain
Aba10042_00175	COG1393	Belongs to the ArsC family
Aba10042_00180	COG0708	Exodeoxyribonuclease III
Aba10042_00200	COG0189	ligase activity
Aba10042_00220	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
Aba10042_00230	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Aba10042_00245	COG4942	peptidase
Aba10042_00255	COG0508	dehydrogenase complex catalyzes the overall conversion of
Aba10042_00265	COG2119	membrane
Aba10042_00285	COG0426	domain, Protein
Aba10042_00285	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba10042_00310	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Aba10042_00330	COG1902	pentaerythritol trinitrate reductase activity
Aba10042_00335	COG1519	Transferase
Aba10042_00340	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Aba10042_00345	COG0668	transmembrane transport
Aba10042_00355	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Aba10042_00360	COG1335	isochorismatase
Aba10042_00365	COG1522	sequence-specific DNA binding
Aba10042_00370	COG3328	transposase activity
Aba10042_00395	COG2205	protein histidine kinase activity
Aba10042_00395	COG0784	Response regulator, receiver
Aba10042_00395	COG2198	Histidine kinase
Aba10042_00400	COG3162	membrane
Aba10042_00405	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Aba10042_00415	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Aba10042_00425	COG3706	GGDEF domain
Aba10042_00435	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
Aba10042_00440	COG1309	transcriptional regulator
Aba10042_00460	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
Aba10042_00460	COG0352	thiamine-phosphate diphosphorylase activity
Aba10042_00460	COG0351	phosphomethylpyrimidine kinase
Aba10042_00470	COG2814	Major facilitator Superfamily
Aba10042_00485	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
Aba10042_00495	COG1113	amino acid transport
Aba10042_00505	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Aba10042_00510	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_00520	COG1335	isochorismatase
Aba10042_00550	COG2814	Major facilitator Superfamily
Aba10042_00555	COG0583	DNA-binding transcription factor activity
Aba10042_00575	COG0667	Aldo Keto reductase
Aba10042_00610	COG1733	regulation of RNA biosynthetic process
Aba10042_00620	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba10042_00685	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
Aba10042_00700	COG2329	Antibiotic biosynthesis monooxygenase
Aba10042_00730	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Aba10042_00760	COG0427	acetyl-CoA hydrolase
Aba10042_00775	COG0745	RESPONSE REGULATOR receiver
Aba10042_00785	COG0659	secondary active sulfate transmembrane transporter activity
Aba10042_00790	COG4221	oxidoreductase activity
Aba10042_00800	COG0488	(ABC) transporter
Aba10042_00885	COG0833	amino acid
Aba10042_00930	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Aba10042_00935	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Aba10042_00950	COG2226	methyltransferase
Aba10042_01000	COG0067	glutamate synthase
Aba10042_01000	COG0069	glutamate synthase activity
Aba10042_01000	COG0070	glutamate synthase
Aba10042_01005	COG0493	'glutamate synthase
Aba10042_01015	COG1704	LemA family
Aba10042_01020	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
Aba10042_01040	COG3307	-O-antigen
Aba10042_01060	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Aba10042_01070	COG0194	GDP metabolic process
Aba10042_01120	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Aba10042_01140	COG5380	lipid catabolic process
Aba10042_01145	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Aba10042_01170	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Aba10042_01175	COG0277	FAD linked oxidase domain protein
Aba10042_01185	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
Aba10042_01190	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba10042_01205	COG1289	transmembrane transporter activity
Aba10042_01215	COG0628	permease
Aba10042_01220	COG1192	Involved in chromosome partitioning
Aba10042_01250	COG0833	amino acid
Aba10042_01255	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Aba10042_01260	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Aba10042_01270	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_01310	COG0583	DNA-binding transcription factor activity
Aba10042_01355	COG0517	IMP dehydrogenase activity
Aba10042_01360	COG1983	PspC domain protein
Aba10042_01370	COG1960	acyl-CoA dehydrogenase activity
Aba10042_01385	COG0408	coproporphyrinogen oxidase activity
Aba10042_01405	COG0513	Belongs to the DEAD box helicase family
Aba10042_01410	COG1127	ABC transporter
Aba10042_01415	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Aba10042_01425	COG2854	intermembrane phospholipid transfer
Aba10042_01435	COG0598	Magnesium transport protein CorA
Aba10042_01445	COG0494	nUDIX hydrolase
Aba10042_01450	COG1040	competence protein
Aba10042_01455	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Aba10042_01475	COG1946	Acyl-CoA thioesterase
Aba10042_01480	COG1301	dicarboxylic acid transport
Aba10042_01495	COG1959	2 iron, 2 sulfur cluster binding
Aba10042_01500	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba10042_01500	COG1017	nitric oxide dioxygenase activity
Aba10042_01505	COG0433	COG0433 Predicted ATPase
Aba10042_01510	COG0626	cystathionine gamma-synthase activity
Aba10042_01630	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Aba10042_01640	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Aba10042_01665	COG1960	acyl-CoA dehydrogenase activity
Aba10042_01670	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
Aba10042_01700	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
Aba10042_01705	COG0339	signal peptide processing
Aba10042_01710	COG0557	exoribonuclease II activity
Aba10042_01755	COG0179	Fumarylacetoacetate (FAA) hydrolase
Aba10042_01760	COG2169	Transcriptional regulator
Aba10042_01765	COG0697	spore germination
Aba10042_01770	COG1295	ribonuclease BN
Aba10042_01805	COG1702	phosphate starvation-inducible protein PhoH
Aba10042_01815	COG1196	nuclear chromosome segregation
Aba10042_01815	COG0741	lytic transglycosylase activity
Aba10042_01815	COG0739	heme binding
Aba10042_01845	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
Aba10042_01850	COG1183	phosphatidylcholine synthase activity
Aba10042_01895	COG1960	acyl-CoA dehydrogenase activity
Aba10042_01900	COG1309	transcriptional regulator
Aba10042_01915	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Aba10042_01920	COG1960	acyl-CoA dehydrogenase activity
Aba10042_01940	COG2969	positive regulation of protein catabolic process
Aba10042_01950	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Aba10042_01965	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Aba10042_01970	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
Aba10042_01990	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Aba10042_02000	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Aba10042_02005	COG1408	metallophosphoesterase
Aba10042_02015	COG2199	diguanylate cyclase activity
Aba10042_02060	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba10042_02060	COG3453	Protein conserved in bacteria
Aba10042_02075	COG1607	acyl-coa hydrolase
Aba10042_02105	COG2350	Protein conserved in bacteria
Aba10042_02115	COG0613	PHP domain protein
Aba10042_02120	COG3781	membrane
Aba10042_02130	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Aba10042_02135	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Aba10042_02145	COG1862	Preprotein translocase
Aba10042_02195	COG2205	protein histidine kinase activity
Aba10042_02200	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
Aba10042_02220	COG0726	polysaccharide deacetylase
Aba10042_02225	COG0463	Glycosyl transferase, family 2
Aba10042_02230	COG0438	transferase activity, transferring glycosyl groups
Aba10042_02295	COG0625	glutathione transferase activity
Aba10042_02300	COG0583	DNA-binding transcription factor activity
Aba10042_02305	COG1960	acyl-CoA dehydrogenase activity
Aba10042_02310	COG1960	acyl-CoA dehydrogenase activity
Aba10042_02320	COG2205	protein histidine kinase activity
Aba10042_02325	COG0745	RESPONSE REGULATOR receiver
Aba10042_02330	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
Aba10042_02350	COG2096	Adenosyltransferase
Aba10042_02365	COG0133	tryptophan synthase activity
Aba10042_02400	COG0285	dihydrofolate synthase activity
Aba10042_02420	COG0450	alkyl hydroperoxide reductase
Aba10042_02435	COG0477	Major facilitator Superfamily
Aba10042_02440	COG1272	protein, Hemolysin III
Aba10042_02470	COG0183	Belongs to the thiolase family
Aba10042_02475	COG2207	Transcriptional regulator
Aba10042_02495	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba10042_02515	COG0183	Belongs to the thiolase family
Aba10042_02525	COG2885	chlorophyll binding
Aba10042_02525	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Aba10042_02535	COG1690	Belongs to the RtcB family
Aba10042_02540	COG0833	amino acid
Aba10042_02550	COG2233	PERMEase
Aba10042_02580	COG2094	Belongs to the DNA glycosylase MPG family
Aba10042_02585	COG4772	TonB-dependent receptor
Aba10042_02600	COG1902	pentaerythritol trinitrate reductase activity
Aba10042_02615	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Aba10042_02620	COG0354	folic acid binding
Aba10042_02630	COG3189	MarR family transcriptional regulator
Aba10042_02635	COG2824	Alkylphosphonate utilization operon protein PhnA
Aba10042_02640	COG3422	double-strand break repair
Aba10042_02680	COG0840	transmembrane signaling receptor activity
Aba10042_02700	COG5510	response to toxic substance
Aba10042_02710	COG2832	Protein of unknown function (DUF454)
Aba10042_02715	COG1376	ErfK ybiS ycfS ynhG family protein
Aba10042_02765	COG1289	transmembrane transporter activity
Aba10042_02770	COG2814	Major facilitator Superfamily
Aba10042_02790	COG1115	amino acid carrier protein
Aba10042_02795	COG1752	Esterase of the alpha-beta hydrolase superfamily
Aba10042_02800	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Aba10042_02805	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
Aba10042_02835	COG2826	transposase and inactivated derivatives, IS30 family
Aba10042_02845	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Aba10042_02855	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Aba10042_02860	COG1077	Cell shape determining protein MreB Mrl
Aba10042_02865	COG1792	Involved in formation and maintenance of cell shape
Aba10042_02870	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
Aba10042_02875	COG0424	maF-like protein
Aba10042_02880	COG1530	ribonuclease E activity
Aba10042_02890	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba10042_02910	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba10042_02935	COG2207	Transcriptional regulator
Aba10042_02955	COG1113	amino acid transport
Aba10042_02960	COG2828	Protein conserved in bacteria
Aba10042_02965	COG0142	geranyltranstransferase activity
Aba10042_02970	COG2315	Protein conserved in bacteria
Aba10042_02985	COG1752	Esterase of the alpha-beta hydrolase superfamily
Aba10042_03005	COG2194	sulfuric ester hydrolase activity
Aba10042_03010	COG0745	RESPONSE REGULATOR receiver
Aba10042_03015	COG0642	Histidine kinase
Aba10042_03025	COG0004	ammonium transporteR
Aba10042_03035	COG0583	DNA-binding transcription factor activity
Aba10042_03055	COG0525	valine-tRNA ligase activity
Aba10042_03065	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_03075	COG0393	Putative heavy-metal-binding
Aba10042_03080	COG0393	Putative heavy-metal-binding
Aba10042_03085	COG1538	Outer membrane efflux protein
Aba10042_03095	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba10042_03100	COG0671	phosphoesterase, PA-phosphatase related
Aba10042_03130	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
Aba10042_03145	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Aba10042_03145	COG1648	precorrin-2 dehydrogenase activity
Aba10042_03150	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Aba10042_03155	COG1733	regulation of RNA biosynthetic process
Aba10042_03165	COG0531	amino acid
Aba10042_03180	COG0321	lipoyl(octanoyl) transferase activity
Aba10042_03185	COG2921	Belongs to the UPF0250 family
Aba10042_03225	COG2009	succinate dehydrogenase
Aba10042_03230	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
Aba10042_03235	COG1053	succinate dehydrogenase
Aba10042_03240	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
Aba10042_03265	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Aba10042_03285	COG2354	Protein conserved in bacteria
Aba10042_03290	COG2321	neutral zinc metallopeptidase
Aba10042_03325	COG2843	Capsule synthesis protein
Aba10042_03340	COG0589	response to stress
Aba10042_03360	COG0505	Belongs to the CarA family
Aba10042_03390	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Aba10042_03395	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Aba10042_03445	COG0477	Major facilitator Superfamily
Aba10042_03450	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Aba10042_03470	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Aba10042_03495	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba10042_03500	COG0584	glycerophosphoryl diester phosphodiesterase
Aba10042_03520	COG0741	lytic transglycosylase activity
Aba10042_03545	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Aba10042_03560	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba10042_03585	COG0778	Nitroreductase
Aba10042_03600	COG1929	Belongs to the glycerate kinase type-1 family
Aba10042_03610	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Aba10042_03615	COG3339	Conserved Protein
Aba10042_03625	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
Aba10042_03640	COG1113	amino acid transport
Aba10042_03655	COG0019	diaminopimelate decarboxylase activity
Aba10042_03665	COG1280	lysine exporter protein (LysE YggA)
Aba10042_03670	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
Aba10042_03700	COG0463	Glycosyl transferase, family 2
Aba10042_03720	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba10042_03750	COG4591	ABC-type transport system involved in lipoprotein release permease component
Aba10042_03755	COG1136	(ABC) transporter
Aba10042_03760	COG2333	competence protein COMEC
Aba10042_03760	COG0658	competence protein
Aba10042_03770	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Aba10042_03770	COG0616	signal peptide processing
Aba10042_03775	COG0596	Alpha beta hydrolase
Aba10042_03780	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Aba10042_03790	COG0628	permease
Aba10042_03825	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Aba10042_03845	COG0823	Involved in the tonB-independent uptake of proteins
Aba10042_03865	COG0824	Thioesterase
Aba10042_03870	COG1473	amidohydrolase
Aba10042_03890	COG0047	phosphoribosylformylglycinamidine synthase activity
Aba10042_03890	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Aba10042_03895	COG2814	Major facilitator Superfamily
Aba10042_03900	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Aba10042_03905	COG1024	Enoyl-CoA hydratase
Aba10042_03910	COG1056	cytidyltransferase-related domain
Aba10042_03910	COG1051	belongs to the nudix hydrolase family
Aba10042_03920	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Aba10042_03935	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Aba10042_03950	COG4625	pathogenesis
Aba10042_03955	COG0583	DNA-binding transcription factor activity
Aba10042_03960	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Aba10042_03965	COG4208	sulfate ABC transporter
Aba10042_03970	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
Aba10042_03980	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Aba10042_03985	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Aba10042_03990	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Aba10042_04010	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Aba10042_04025	COG0681	Belongs to the peptidase S26 family
Aba10042_04040	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Aba10042_04050	COG1381	Involved in DNA repair and RecF pathway recombination
Aba10042_04055	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Aba10042_04065	COG4221	oxidoreductase activity
Aba10042_04115	COG0556	nucleotide-excision repair
Aba10042_04170	COG2070	2-Nitropropane dioxygenase
Aba10042_04200	COG1215	transferase activity, transferring glycosyl groups
Aba10042_04215	COG0415	Belongs to the DNA photolyase family
Aba10042_04225	COG1252	NADH dehydrogenase
Aba10042_04230	COG1686	Belongs to the peptidase S11 family
Aba10042_04245	COG1187	pseudouridine synthase activity
Aba10042_04270	COG0477	Major facilitator Superfamily
Aba10042_04275	COG0583	DNA-binding transcription factor activity
Aba10042_04290	COG0612	Peptidase, M16
Aba10042_04315	COG0352	thiamine-phosphate diphosphorylase activity
Aba10042_04350	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba10042_04365	COG1309	transcriptional regulator
Aba10042_04375	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Aba10042_04380	COG0076	glutamate decarboxylase activity
Aba10042_04390	COG1522	sequence-specific DNA binding
Aba10042_04395	COG3961	Belongs to the TPP enzyme family
Aba10042_04400	COG1113	amino acid transport
Aba10042_04405	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
Aba10042_04410	COG0573	inorganic phosphate transmembrane transporter activity
Aba10042_04420	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Aba10042_04425	COG0616	signal peptide processing
Aba10042_04460	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Aba10042_04465	COG1686	Belongs to the peptidase S11 family
Aba10042_04490	COG0583	DNA-binding transcription factor activity
Aba10042_04495	COG1067	ATP-dependent peptidase activity
Aba10042_04540	COG1966	Carbon starvation protein
Aba10042_04545	COG2879	small protein
Aba10042_04580	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
Aba10042_04580	COG2508	Transcriptional regulator
Aba10042_04600	COG1113	amino acid transport
Aba10042_04605	COG0583	DNA-binding transcription factor activity
Aba10042_04610	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Aba10042_04615	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Aba10042_04630	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba10042_04635	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
Aba10042_04635	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Aba10042_04670	COG2814	Major facilitator Superfamily
Aba10042_04675	COG4948	Mandelate Racemase Muconate Lactonizing
Aba10042_04685	COG1309	transcriptional regulator
Aba10042_04705	COG1741	Belongs to the pirin family
Aba10042_04715	COG2964	Protein conserved in bacteria
Aba10042_04730	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba10042_04735	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Aba10042_04740	COG4605	iron ion homeostasis
Aba10042_04745	COG4604	ABC transporter, ATP-binding protein
Aba10042_04750	COG4607	ABC-type enterochelin transport system periplasmic component
Aba10042_04755	COG4774	siderophore transport
Aba10042_04765	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba10042_04770	COG1021	2,3-dihydroxybenzoate-AMP ligase
Aba10042_04775	COG1535	isochorismatase
Aba10042_04775	COG3433	isochorismatase activity
Aba10042_04790	COG1132	(ABC) transporter
Aba10042_04800	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
Aba10042_04810	COG1169	isochorismate synthase
Aba10042_04825	COG3739	integral membrane protein
Aba10042_04860	COG1529	Aldehyde oxidase and xanthine dehydrogenase
Aba10042_04890	COG0308	aminopeptidase N
Aba10042_04895	COG0512	Glutamine amidotransferase of anthranilate synthase
Aba10042_05190	COG0739	heme binding
Aba10042_05240	COG0582	viral genome integration into host DNA
Aba10042_05250	COG3104	oligopeptide transport
Aba10042_05265	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Aba10042_05300	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Aba10042_05305	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Aba10042_05310	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Aba10042_05330	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Aba10042_05335	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Aba10042_05340	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Aba10042_05355	COG1960	acyl-CoA dehydrogenase activity
Aba10042_05360	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Aba10042_05365	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Aba10042_05375	COG2223	nitrite transmembrane transporter activity
Aba10042_05385	COG0024	Methionine aminopeptidase
Aba10042_05390	COG0052	Belongs to the universal ribosomal protein uS2 family
Aba10042_05405	COG2207	Transcriptional regulator
Aba10042_05430	COG2951	lytic endotransglycosylase activity
Aba10042_05435	COG0772	Belongs to the SEDS family
Aba10042_05450	COG0842	Transport permease protein
Aba10042_05455	COG1131	(ABC) transporter
Aba10042_05490	COG1538	Outer membrane efflux protein
Aba10042_05500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba10042_05515	COG4215	(ABC) transporter
Aba10042_05520	COG4160	amino acid transport
Aba10042_05525	COG4598	ABC transporter
Aba10042_05535	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Aba10042_05545	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba10042_05560	COG1720	tRNA m6t6A37 methyltransferase activity
Aba10042_05580	COG0745	RESPONSE REGULATOR receiver
Aba10042_05585	COG0642	Histidine kinase
Aba10042_05595	COG0494	nUDIX hydrolase
Aba10042_05605	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Aba10042_05610	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Aba10042_05615	COG3139	Protein of unknown function (DUF1315)
Aba10042_05620	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Aba10042_05630	COG1301	dicarboxylic acid transport
Aba10042_05635	COG1960	acyl-CoA dehydrogenase activity
Aba10042_05640	COG2819	hydrolase of the alpha beta superfamily
Aba10042_05650	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Aba10042_05660	COG2195	Cleaves the N-terminal amino acid of tripeptides
Aba10042_05665	COG1234	tRNA 3'-trailer cleavage
Aba10042_05695	COG2363	Small membrane protein
Aba10042_05715	COG0513	Belongs to the DEAD box helicase family
Aba10042_05725	COG0778	Nitroreductase
Aba10042_05755	COG1286	toxin biosynthetic process
Aba10042_05780	COG4783	chaperone-mediated protein folding
Aba10042_05785	COG1610	YqeY-like protein
Aba10042_05790	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Aba10042_05885	COG3111	PFAM Bacterial OB fold (BOF) protein
Aba10042_05910	COG3243	poly(R)-hydroxyalkanoic acid synthase
Aba10042_05915	COG0786	glutamate:sodium symporter activity
Aba10042_05925	COG2186	Transcriptional regulator
Aba10042_05975	COG0477	Major facilitator Superfamily
Aba10042_06005	COG2985	domain, Protein
Aba10042_06015	COG2995	paraquat-inducible protein a
Aba10042_06020	COG3008	intermembrane lipid transfer
Aba10042_06020	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Aba10042_06030	COG1794	racemase activity, acting on amino acids and derivatives
Aba10042_06050	COG3316	Transposase and inactivated derivatives
Aba10042_06070	COG3316	Transposase and inactivated derivatives
Aba10042_06090	COG3316	Transposase and inactivated derivatives
Aba10042_06150	COG3316	Transposase and inactivated derivatives
Aba10042_06170	COG1301	dicarboxylic acid transport
Aba10042_06180	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba10042_06185	COG2011	ABC-type metal ion transport system permease component
Aba10042_06190	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Aba10042_06195	COG1464	Belongs to the NlpA lipoprotein family
Aba10042_06200	COG0151	Belongs to the GarS family
Aba10042_06205	COG0138	bifunctional purine biosynthesis protein purh
Aba10042_06210	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
Aba10042_06240	COG2308	Evidence 4 Homologs of previously reported genes of
Aba10042_06250	COG1305	Transglutaminase-like
Aba10042_06260	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Aba10042_06265	COG0305	Participates in initiation and elongation during chromosome replication
Aba10042_06290	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
Aba10042_06300	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Aba10042_06305	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Aba10042_06330	COG1649	PFAM Uncharacterised BCR, COG1649
Aba10042_06330	COG0726	polysaccharide deacetylase
Aba10042_06335	COG1215	transferase activity, transferring glycosyl groups
Aba10042_06340	COG3658	cytochrome
Aba10042_06350	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aba10042_06370	COG0583	DNA-binding transcription factor activity
Aba10042_06390	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Aba10042_06395	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Aba10042_06410	COG1960	acyl-CoA dehydrogenase activity
Aba10042_06415	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Aba10042_06420	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba10042_06445	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Aba10042_06450	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
Aba10042_06460	COG2205	protein histidine kinase activity
Aba10042_06465	COG0745	RESPONSE REGULATOR receiver
Aba10042_06470	COG0174	glutamine synthetase
Aba10042_06490	COG0729	surface antigen
Aba10042_06520	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Aba10042_06525	COG2814	Major facilitator Superfamily
Aba10042_06540	COG0583	DNA-binding transcription factor activity
Aba10042_06555	COG1187	pseudouridine synthase activity
Aba10042_06575	COG0802	atpase or kinase
Aba10042_06580	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Aba10042_06590	COG1923	regulation of RNA biosynthetic process
Aba10042_06595	COG0697	spore germination
Aba10042_06610	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Aba10042_06625	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Aba10042_06625	COG0519	Catalyzes the synthesis of GMP from XMP
Aba10042_06630	COG4302	ethanolamine ammonia-lyase activity
Aba10042_06635	COG4303	Ethanolamine ammonia lyase large subunit
Aba10042_06640	COG0531	amino acid
Aba10042_06660	COG1454	alcohol dehydrogenase
Aba10042_06665	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Aba10042_06675	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
Aba10042_06695	COG0308	aminopeptidase N
Aba10042_06705	COG4221	oxidoreductase activity
Aba10042_06715	COG1605	Chorismate mutase
Aba10042_06735	COG1309	transcriptional regulator
Aba10042_06745	COG0668	transmembrane transport
Aba10042_06780	COG4773	Receptor
Aba10042_06800	COG0488	(ABC) transporter
Aba10042_06805	COG0589	response to stress
Aba10042_06825	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Aba10042_06835	COG3135	benzoate transporter
Aba10042_06840	COG1522	sequence-specific DNA binding
Aba10042_06855	COG0583	DNA-binding transcription factor activity
Aba10042_06865	COG0183	Belongs to the thiolase family
Aba10042_06895	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Aba10042_06905	COG0824	Thioesterase
Aba10042_06910	COG1454	alcohol dehydrogenase
Aba10042_06920	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Aba10042_06940	COG0069	glutamate synthase activity
Aba10042_07235	COG1598	PFAM Uncharacterised protein family UPF0150
Aba10042_07270	COG0739	heme binding
Aba10042_07365	COG2814	Major facilitator Superfamily
Aba10042_07380	COG0511	ligase activity, forming carbon-carbon bonds
Aba10042_07395	COG1116	anion transmembrane transporter activity
Aba10042_07395	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Aba10042_07400	COG0745	RESPONSE REGULATOR receiver
Aba10042_07410	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba10042_07410	COG2146	nitrite reductase [NAD(P)H] activity
Aba10042_07415	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba10042_07420	COG0243	molybdopterin cofactor binding
Aba10042_07430	COG0243	molybdopterin cofactor binding
Aba10042_07435	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Aba10042_07450	COG0315	cyclic pyranopterin monophosphate synthase activity
Aba10042_07450	COG0521	Mo-molybdopterin cofactor biosynthetic process
Aba10042_07455	COG0303	'Molybdopterin
Aba10042_07465	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba10042_07470	COG0697	spore germination
Aba10042_07490	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
Aba10042_07495	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Aba10042_07565	COG2204	response regulator
Aba10042_07570	COG3852	Histidine kinase
Aba10042_07590	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Aba10042_07595	COG0575	Belongs to the CDS family
Aba10042_07630	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Aba10042_07645	COG2137	regulation of response to DNA damage stimulus
Aba10042_07655	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
Aba10042_07660	COG1011	Hydrolase
Aba10042_07685	COG1522	sequence-specific DNA binding
Aba10042_07695	COG1113	amino acid transport
Aba10042_07715	COG0659	secondary active sulfate transmembrane transporter activity
Aba10042_07720	COG2135	peptidase activity
Aba10042_07735	COG3300	MHYT domain
Aba10042_07735	COG5001	Diguanylate cyclase
Aba10042_07755	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
Aba10042_07755	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Aba10042_07755	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Aba10042_07760	COG1105	Belongs to the carbohydrate kinase PfkB family
Aba10042_07765	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
Aba10042_07765	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Aba10042_07795	COG0024	Methionine aminopeptidase
Aba10042_07800	COG0583	DNA-binding transcription factor activity
Aba10042_07810	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Aba10042_07815	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Aba10042_07820	COG0516	GMP reductase activity
Aba10042_07820	COG0517	IMP dehydrogenase activity
Aba10042_07845	COG0552	protein localization to endoplasmic reticulum
Aba10042_07855	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
Aba10042_07870	COG4890	Cyd operon protein YbgT
Aba10042_07875	COG1294	oxidase, subunit
Aba10042_07890	COG1585	Membrane protein implicated in regulation of membrane protease activity
Aba10042_07900	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Aba10042_07905	COG4774	siderophore transport
Aba10042_07920	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Aba10042_07925	COG0569	domain protein
Aba10042_07930	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Aba10042_07960	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Aba10042_07965	COG0542	response to heat
Aba10042_07975	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Aba10042_07990	COG0446	pyridine nucleotide-disulphide oxidoreductase
Aba10042_07990	COG1902	pentaerythritol trinitrate reductase activity
Aba10042_08035	COG2323	membrane
Aba10042_08040	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
Aba10042_08050	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Aba10042_08055	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Aba10042_08060	COG0183	Belongs to the thiolase family
Aba10042_08065	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Aba10042_08070	COG0596	Alpha beta hydrolase
Aba10042_08075	COG2271	Major facilitator Superfamily
Aba10042_08080	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Aba10042_08085	COG3485	protocatechuate 3,4-dioxygenase
Aba10042_08090	COG3485	protocatechuate 3,4-dioxygenase
Aba10042_08095	COG0710	3-dehydroquinate dehydratase activity
Aba10042_08100	COG3420	alginic acid biosynthetic process
Aba10042_08105	COG3659	wide pore channel activity
Aba10042_08110	COG4993	Dehydrogenase
Aba10042_08120	COG2391	methyltransferase activity
Aba10042_08135	COG1414	Transcriptional regulator
Aba10042_08140	COG0583	DNA-binding transcription factor activity
Aba10042_08145	COG1960	acyl-CoA dehydrogenase activity
Aba10042_08170	COG2814	Major facilitator Superfamily
Aba10042_08180	COG0154	amidase activity
Aba10042_08200	COG4638	Rieske (2fe-2S)
Aba10042_08210	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_08220	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba10042_08230	COG3733	amine oxidase
Aba10042_08240	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_08250	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Aba10042_08255	COG0183	Belongs to the thiolase family
Aba10042_08260	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Aba10042_08265	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Aba10042_08275	COG4829	muconolactone delta-isomerase
Aba10042_08280	COG4948	Mandelate Racemase Muconate Lactonizing
Aba10042_08285	COG0583	DNA-binding transcription factor activity
Aba10042_08295	COG2186	Transcriptional regulator
Aba10042_08315	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_08335	COG1960	acyl-CoA dehydrogenase activity
Aba10042_08345	COG3829	transcription factor binding
Aba10042_08355	COG3162	membrane
Aba10042_08370	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_08385	COG0753	catalase activity
Aba10042_08410	COG1846	Transcriptional regulator
Aba10042_08415	COG1902	pentaerythritol trinitrate reductase activity
Aba10042_08415	COG0446	pyridine nucleotide-disulphide oxidoreductase
Aba10042_08425	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
Aba10042_08455	COG1309	transcriptional regulator
Aba10042_08465	COG1335	isochorismatase
Aba10042_08470	COG0583	DNA-binding transcription factor activity
Aba10042_08480	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Aba10042_08480	COG0475	glutathione-regulated potassium exporter activity
Aba10042_08490	COG1473	amidohydrolase
Aba10042_08505	COG2831	hemolysin activation secretion protein
Aba10042_08510	COG3210	domain, Protein
Aba10042_08555	COG0583	DNA-binding transcription factor activity
Aba10042_08580	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Aba10042_08585	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
Aba10042_08605	COG1566	PFAM secretion protein HlyD family protein
Aba10042_08620	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_08625	COG0129	dihydroxy-acid dehydratase activity
Aba10042_08635	COG0583	DNA-binding transcription factor activity
Aba10042_08640	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Aba10042_08650	COG2084	Dehydrogenase
Aba10042_08655	COG2207	Transcriptional regulator
Aba10042_08670	COG1064	alcohol dehydrogenase
Aba10042_08685	COG1120	ATPase activity
Aba10042_08705	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Aba10042_08825	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Aba10042_08875	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_08890	COG2207	Transcriptional regulator
Aba10042_08900	COG2205	protein histidine kinase activity
Aba10042_08905	COG0745	RESPONSE REGULATOR receiver
Aba10042_08910	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba10042_08915	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Aba10042_08920	COG1538	Outer membrane efflux protein
Aba10042_08930	COG2072	flavoprotein involved in K transport
Aba10042_08950	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Aba10042_08970	COG3539	Fimbrial protein
Aba10042_09000	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
Aba10042_09010	COG0753	catalase activity
Aba10042_09025	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Aba10042_09090	COG1535	isochorismatase
Aba10042_09090	COG3433	isochorismatase activity
Aba10042_09095	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_09100	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
Aba10042_09105	COG4149	molybdate abc transporter
Aba10042_09110	COG0725	ABC transporter, periplasmic molybdate-binding protein
Aba10042_09120	COG4638	Rieske (2fe-2S)
Aba10042_09125	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
Aba10042_09130	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba10042_09130	COG0543	2 iron, 2 sulfur cluster binding
Aba10042_09145	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba10042_09155	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_09160	COG0412	Dienelactone hydrolase
Aba10042_09170	COG2207	Transcriptional regulator
Aba10042_09180	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_09185	COG2610	gluconate transmembrane transporter activity
Aba10042_09195	COG0583	DNA-binding transcription factor activity
Aba10042_09205	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Aba10042_09210	COG2031	fatty acid transporter
Aba10042_09215	COG0183	Belongs to the thiolase family
Aba10042_09220	COG0583	DNA-binding transcription factor activity
Aba10042_09225	COG0583	DNA-binding transcription factor activity
Aba10042_09240	COG1027	Aspartate ammonia-lyase
Aba10042_09250	COG0477	Major facilitator Superfamily
Aba10042_09270	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Aba10042_09275	COG4521	taurine ABC transporter
Aba10042_09300	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Aba10042_09305	COG1733	regulation of RNA biosynthetic process
Aba10042_09310	COG3708	Transcriptional regulator
Aba10042_09310	COG2207	Transcriptional regulator
Aba10042_09325	COG0730	response to heat
Aba10042_09335	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba10042_09335	COG3453	Protein conserved in bacteria
Aba10042_09345	COG3781	membrane
Aba10042_09350	COG1063	alcohol dehydrogenase
Aba10042_09360	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Aba10042_09365	COG0508	dehydrogenase complex catalyzes the overall conversion of
Aba10042_09370	COG0022	dehydrogenase e1 component
Aba10042_09375	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Aba10042_09380	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Aba10042_09395	COG3706	GGDEF domain
Aba10042_09410	COG0133	tryptophan synthase activity
Aba10042_09420	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Aba10042_09455	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Aba10042_09480	COG2226	methyltransferase
Aba10042_09535	COG0842	Transport permease protein
Aba10042_09540	COG0842	Transport permease protein
Aba10042_09545	COG1131	(ABC) transporter
Aba10042_09560	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Aba10042_09565	COG4773	Receptor
Aba10042_09585	COG0730	response to heat
Aba10042_09590	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Aba10042_09610	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
Aba10042_09665	COG4264	IucA IucC family
Aba10042_09670	COG4264	IucA IucC family
Aba10042_09690	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
Aba10042_09705	COG1960	acyl-CoA dehydrogenase activity
Aba10042_09710	COG1960	acyl-CoA dehydrogenase activity
Aba10042_09715	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Aba10042_09720	COG2207	Transcriptional regulator
Aba10042_09725	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Aba10042_09730	COG0776	regulation of translation
Aba10042_09755	COG0822	iron-sulfur transferase activity
Aba10042_09760	COG0316	Belongs to the HesB IscA family
Aba10042_09790	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Aba10042_09810	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
Aba10042_09815	COG0702	epimerase
Aba10042_09850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Aba10042_09860	COG0339	signal peptide processing
Aba10042_09905	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
Aba10042_09910	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
Aba10042_09940	COG0776	regulation of translation
Aba10042_09960	COG0590	tRNA wobble adenosine to inosine editing
Aba10042_09990	COG2165	general secretion pathway protein
Aba10042_10005	COG0084	hydrolase, TatD family'
Aba10042_10025	COG1663	tetraacyldisaccharide 4'-kinase activity
Aba10042_10030	COG1132	(ABC) transporter
Aba10042_10040	COG0811	peptide transport
Aba10042_10045	COG1475	DNA binding
Aba10042_10050	COG1192	Involved in chromosome partitioning
Aba10042_10060	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Aba10042_10075	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Aba10042_10080	COG0191	fructose-bisphosphate aldolase activity
Aba10042_10100	COG0424	maF-like protein
Aba10042_10105	COG2850	peptidyl-arginine hydroxylation
Aba10042_10115	COG0640	Transcriptional regulator
Aba10042_10125	COG3619	membrane
Aba10042_10130	COG3122	Protein conserved in bacteria
Aba10042_10135	COG1132	(ABC) transporter
Aba10042_10155	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Aba10042_10160	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Aba10042_10170	COG0506	proline dehydrogenase activity
Aba10042_10170	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Aba10042_10170	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Aba10042_10175	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
Aba10042_10190	COG3698	Phosphodiester glycosidase
Aba10042_10200	COG2353	YceI-like domain
Aba10042_10210	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Aba10042_10255	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Aba10042_10255	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Aba10042_10280	COG3539	Fimbrial protein
Aba10042_10285	COG3121	Chaperone
Aba10042_10315	COG0697	spore germination
Aba10042_10325	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
Aba10042_10335	COG0583	DNA-binding transcription factor activity
Aba10042_10355	COG1309	transcriptional regulator
Aba10042_10370	COG1522	sequence-specific DNA binding
Aba10042_10380	COG1126	abc transporter atp-binding protein
Aba10042_10385	COG0765	amino acid transport
Aba10042_10390	COG0765	amino acid transport
Aba10042_10420	COG1464	Belongs to the NlpA lipoprotein family
Aba10042_10430	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Aba10042_10435	COG2011	ABC-type metal ion transport system permease component
Aba10042_10440	COG0012	GTP binding
Aba10042_10465	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
Aba10042_10505	COG0386	Belongs to the glutathione peroxidase family
Aba10042_10515	COG0436	Aminotransferase
Aba10042_10555	COG3634	alkyl hydroperoxide reductase activity
Aba10042_10570	COG0583	DNA-binding transcription factor activity
Aba10042_10575	COG0798	PFAM Bile acid sodium symporter
Aba10042_10580	COG0640	Transcriptional regulator
Aba10042_10595	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
Aba10042_10605	COG0583	DNA-binding transcription factor activity
Aba10042_10615	COG1953	Uracil, thiamine, allantoin
Aba10042_10625	COG2175	clavaminate synthase activity
Aba10042_10630	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Aba10042_10635	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
Aba10042_10640	COG4521	taurine ABC transporter
Aba10042_10650	COG0477	Major facilitator Superfamily
Aba10042_10675	COG1271	oxidase subunit
Aba10042_10680	COG1294	oxidase, subunit
Aba10042_10690	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba10042_10710	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
Aba10042_10730	COG3052	prosthetic group binding
Aba10042_10735	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
Aba10042_10745	COG2814	Major facilitator Superfamily
Aba10042_10765	COG1346	cytolysis
Aba10042_10775	COG0583	DNA-binding transcription factor activity
Aba10042_10780	COG0625	glutathione transferase activity
Aba10042_10785	COG0625	glutathione transferase activity
Aba10042_10790	COG0583	DNA-binding transcription factor activity
Aba10042_10805	COG1045	serine acetyltransferase
Aba10042_10810	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Aba10042_10815	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Aba10042_10820	COG1280	lysine exporter protein (LysE YggA)
Aba10042_10835	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Aba10042_10840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Aba10042_10845	COG1126	abc transporter atp-binding protein
Aba10042_10850	COG0765	amino acid transport
Aba10042_10855	COG0765	amino acid transport
Aba10042_10875	COG2205	protein histidine kinase activity
Aba10042_10875	COG0784	Response regulator, receiver
Aba10042_10895	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Aba10042_10915	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_10960	COG0583	DNA-binding transcription factor activity
Aba10042_10980	COG0318	PFAM AMP-dependent synthetase and ligase
Aba10042_10985	COG1309	transcriptional regulator
Aba10042_10990	COG1960	acyl-CoA dehydrogenase activity
Aba10042_10995	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Aba10042_11000	COG1024	Enoyl-CoA hydratase
Aba10042_11015	COG0583	DNA-binding transcription factor activity
Aba10042_11030	COG1960	acyl-CoA dehydrogenase activity
Aba10042_11040	COG2814	Major facilitator Superfamily
Aba10042_11050	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Aba10042_11055	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Aba10042_11060	COG2814	Major facilitator Superfamily
Aba10042_11065	COG1960	acyl-CoA dehydrogenase activity
Aba10042_11070	COG1024	Enoyl-CoA hydratase
Aba10042_11075	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_11085	COG0183	Belongs to the thiolase family
Aba10042_11095	COG2814	Major facilitator Superfamily
Aba10042_11105	COG1024	Enoyl-CoA hydratase
Aba10042_11120	COG1960	acyl-CoA dehydrogenase activity
Aba10042_11125	COG2814	Major facilitator Superfamily
Aba10042_11130	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Aba10042_11135	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
Aba10042_11150	COG3842	ATPase activity
Aba10042_11155	COG1840	ABC-type Fe3 transport system, periplasmic component
Aba10042_11165	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba10042_11170	COG1414	Transcriptional regulator
Aba10042_11180	COG0583	DNA-binding transcription factor activity
Aba10042_11185	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Aba10042_11190	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_11200	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
Aba10042_11210	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_11215	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aba10042_11220	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba10042_11225	COG2267	carboxylic ester hydrolase activity
Aba10042_11245	COG3038	cytochrome b561
Aba10042_11250	COG0753	catalase activity
Aba10042_11290	COG2050	protein possibly involved in aromatic compounds catabolism
Aba10042_11300	COG3327	negative regulation of DNA-templated transcription, initiation
Aba10042_11305	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
Aba10042_11310	COG0183	Belongs to the thiolase family
Aba10042_11315	COG1250	3-hydroxyacyl-CoA dehydrogenase
Aba10042_11320	COG1024	Enoyl-CoA hydratase
Aba10042_11325	COG1024	Enoyl-CoA hydratase
Aba10042_11330	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba10042_11335	COG2151	metal-sulfur cluster biosynthetic enzyme
Aba10042_11340	COG3396	Phenylacetate-CoA oxygenase
Aba10042_11345	COG3460	Phenylacetate-CoA oxygenase
Aba10042_11350	COG3396	Phenylacetate-CoA oxygenase
Aba10042_11355	COG2030	dehydratase
Aba10042_11355	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_11360	COG1760	l-serine dehydratase
Aba10042_11365	COG0531	amino acid
Aba10042_11370	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_11385	COG0446	pyridine nucleotide-disulphide oxidoreductase
Aba10042_11395	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Aba10042_11415	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba10042_11430	COG0789	Transcriptional regulator
Aba10042_11445	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Aba10042_11460	COG2807	transmembrane transport
Aba10042_11465	COG0590	tRNA wobble adenosine to inosine editing
Aba10042_11475	COG0583	DNA-binding transcription factor activity
Aba10042_11515	COG2885	chlorophyll binding
Aba10042_11515	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Aba10042_11585	COG1116	anion transmembrane transporter activity
Aba10042_11590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Aba10042_11600	COG0864	Transcriptional regulator
Aba10042_11620	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba10042_11625	COG0439	Biotin carboxylase
Aba10042_11640	COG1063	alcohol dehydrogenase
Aba10042_11650	COG1309	transcriptional regulator
Aba10042_11675	COG0038	chloride channel
Aba10042_11680	COG4770	biotin carboxylase activity
Aba10042_11700	COG1914	H( )-stimulated, divalent metal cation uptake system
Aba10042_11705	COG0583	DNA-binding transcription factor activity
Aba10042_11720	COG3209	COG3209 Rhs family protein
Aba10042_11725	COG3501	Rhs element vgr protein
Aba10042_11760	COG1250	3-hydroxyacyl-CoA dehydrogenase
Aba10042_11780	COG2814	Major facilitator Superfamily
Aba10042_11795	COG1560	Kdo2-lipid A biosynthetic process
Aba10042_11805	COG5006	permease, DMT superfamily
Aba10042_11810	COG1522	sequence-specific DNA binding
Aba10042_11825	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
Aba10042_11865	COG1538	Outer membrane efflux protein
Aba10042_11870	COG1137	ATPase activity
Aba10042_11875	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
Aba10042_11885	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Aba10042_11890	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Aba10042_11890	COG0517	IMP dehydrogenase activity
Aba10042_11925	COG1733	regulation of RNA biosynthetic process
Aba10042_11930	COG2814	Major facilitator Superfamily
Aba10042_11970	COG1278	Cold shock
Aba10042_11975	COG1280	lysine exporter protein (LysE YggA)
Aba10042_12015	COG1570	exodeoxyribonuclease VII activity
Aba10042_12070	COG0583	DNA-binding transcription factor activity
Aba10042_12075	COG4638	Rieske (2fe-2S)
Aba10042_12080	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
Aba10042_12085	COG0633	Ferredoxin
Aba10042_12085	COG0543	2 iron, 2 sulfur cluster binding
Aba10042_12090	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_12095	COG3135	benzoate transporter
Aba10042_12100	COG2814	Major facilitator Superfamily
Aba10042_12115	COG1643	Atp-dependent helicase
Aba10042_12120	COG0450	alkyl hydroperoxide reductase
Aba10042_12130	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Aba10042_12140	COG3634	alkyl hydroperoxide reductase activity
Aba10042_12160	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Aba10042_12165	COG0625	glutathione transferase activity
Aba10042_12175	COG2885	chlorophyll binding
Aba10042_12230	COG1765	OsmC-like protein
Aba10042_12250	COG0667	Aldo Keto reductase
Aba10042_12265	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Aba10042_12275	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Aba10042_12295	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Aba10042_12305	COG3038	cytochrome b561
Aba10042_12310	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
Aba10042_12315	COG2252	PERMEase
Aba10042_12325	COG2072	flavoprotein involved in K transport
Aba10042_12340	COG1741	Belongs to the pirin family
Aba10042_12345	COG1309	transcriptional regulator
Aba10042_12355	COG0300	oxidoreductase activity
Aba10042_12370	COG3316	Transposase and inactivated derivatives
Aba10042_12395	COG3316	Transposase and inactivated derivatives
Aba10042_12400	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Aba10042_12410	COG3316	Transposase and inactivated derivatives
Aba10042_12435	COG3316	Transposase and inactivated derivatives
Aba10042_12440	COG1113	amino acid transport
Aba10042_12460	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_12480	COG0531	amino acid
Aba10042_12490	COG1113	amino acid transport
Aba10042_12535	COG3209	COG3209 Rhs family protein
Aba10042_12540	COG3501	Rhs element vgr protein
Aba10042_12560	COG4269	membrane
Aba10042_12575	COG1902	pentaerythritol trinitrate reductase activity
Aba10042_12575	COG0446	pyridine nucleotide-disulphide oxidoreductase
Aba10042_12585	COG4251	negative regulation of phosphorylation
Aba10042_12585	COG2203	Gaf domain
Aba10042_12585	COG3706	GGDEF domain
Aba10042_12585	COG5001	Diguanylate cyclase
Aba10042_12595	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba10042_12615	COG4172	Belongs to the ABC transporter superfamily
Aba10042_12620	COG4239	(ABC) transporter, permease
Aba10042_12625	COG4174	ABC transporter (Permease)
Aba10042_12635	COG0741	lytic transglycosylase activity
Aba10042_12635	COG1388	LysM domain
Aba10042_12635	COG0741	lytic transglycosylase activity
Aba10042_12635	COG1388	LysM domain
Aba10042_12640	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba10042_12690	COG0583	DNA-binding transcription factor activity
Aba10042_12695	COG1279	arginine transmembrane transporter activity
Aba10042_12715	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba10042_12720	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba10042_12725	COG0006	proline dipeptidase activity
Aba10042_12760	COG2194	sulfuric ester hydrolase activity
Aba10042_12805	COG0739	heme binding
Aba10042_13130	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Aba10042_13155	COG3384	dioxygenase
Aba10042_13165	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Aba10042_13170	COG2878	Part of a membrane complex involved in electron transport
Aba10042_13175	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Aba10042_13200	COG0768	penicillin binding
Aba10042_13205	COG0742	ribosomal rna small subunit methyltransferase
Aba10042_13220	COG0830	nickel cation binding
Aba10042_13230	COG0804	urea catabolic process
Aba10042_13270	COG1253	flavin adenine dinucleotide binding
Aba10042_13280	COG2851	Citrate transporter
Aba10042_13330	COG1773	rubredoxin
Aba10042_13335	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba10042_13345	COG0583	DNA-binding transcription factor activity
Aba10042_13375	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
Aba10042_13380	COG4181	ATPase activity
Aba10042_13425	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Aba10042_13445	COG0306	phosphate transporter
Aba10042_13455	COG3958	Transketolase
Aba10042_13460	COG3959	Transketolase, thiamine diphosphate binding domain
Aba10042_13465	COG2271	Major facilitator Superfamily
Aba10042_13470	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_13475	COG0583	DNA-binding transcription factor activity
Aba10042_13495	COG2223	nitrite transmembrane transporter activity
Aba10042_13500	COG2207	Transcriptional regulator
Aba10042_13505	COG2066	Belongs to the glutaminase family
Aba10042_13510	COG0242	peptide deformylase activity
Aba10042_13515	COG0477	Major facilitator Superfamily
Aba10042_13525	COG0028	Belongs to the TPP enzyme family
Aba10042_13540	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_13545	COG2267	carboxylic ester hydrolase activity
Aba10042_13555	COG2271	Major facilitator Superfamily
Aba10042_13560	COG0446	pyridine nucleotide-disulphide oxidoreductase
Aba10042_13570	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_13590	COG1414	Transcriptional regulator
Aba10042_13605	COG1024	Enoyl-CoA hydratase
Aba10042_13615	COG1215	transferase activity, transferring glycosyl groups
Aba10042_13620	COG0726	polysaccharide deacetylase
Aba10042_13620	COG1649	PFAM Uncharacterised BCR, COG1649
Aba10042_13630	COG4681	YaeQ
Aba10042_13640	COG0523	cobalamin synthesis protein
Aba10042_13650	COG1607	acyl-coa hydrolase
Aba10042_13660	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Aba10042_13665	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Aba10042_13670	COG1309	transcriptional regulator
Aba10042_13695	COG2040	homocysteine
Aba10042_13700	COG0531	amino acid
Aba10042_13755	COG1595	DNA-templated transcription, initiation
Aba10042_13765	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba10042_13770	COG0477	Major facilitator Superfamily
Aba10042_13890	COG0592	DNA-directed DNA polymerase activity
Aba10042_13930	COG2026	Addiction module toxin, RelE StbE family
Aba10042_14080	COG3755	Protein conserved in bacteria
Aba10042_14125	COG1484	DNA-dependent DNA replication
Aba10042_14215	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba10042_14280	COG0405	Gamma-glutamyltransferase
Aba10042_14285	COG2814	Major facilitator Superfamily
Aba10042_14295	COG2050	protein possibly involved in aromatic compounds catabolism
Aba10042_14310	COG1090	epimerase
Aba10042_14330	COG0420	3'-5' exonuclease activity
Aba10042_14355	COG0735	belongs to the Fur family
Aba10042_14360	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Aba10042_14385	COG0121	glutamine amidotransferase
Aba10042_14400	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Aba10042_14410	COG0210	DNA helicase
Aba10042_14415	COG2885	chlorophyll binding
Aba10042_14420	COG0204	Acyl-transferase
Aba10042_14435	COG2894	cell division
Aba10042_14460	COG1280	lysine exporter protein (LysE YggA)
Aba10042_14465	COG1674	ftsk spoiiie
Aba10042_14465	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Aba10042_14470	COG0492	ferredoxin-NADP+ reductase activity
Aba10042_14475	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
Aba10042_14485	COG0456	acetyltransferase
Aba10042_14545	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Aba10042_14545	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Aba10042_14565	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_14585	COG0473	3-isopropylmalate dehydrogenase activity
Aba10042_14590	COG0583	DNA-binding transcription factor activity
Aba10042_14610	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Aba10042_14635	COG0564	pseudouridine synthase activity
Aba10042_14645	COG0358	DNA primase activity
Aba10042_14660	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
Aba10042_14690	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Aba10042_14720	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Aba10042_14730	COG0351	phosphomethylpyrimidine kinase
Aba10042_14730	COG0352	thiamine-phosphate diphosphorylase activity
Aba10042_14730	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
Aba10042_14735	COG1652	LysM domain
Aba10042_14760	COG1399	metal-binding, possibly nucleic acid-binding protein
Aba10042_14765	COG3101	peptidyl-lysine hydroxylation
Aba10042_14770	COG0009	L-threonylcarbamoyladenylate synthase
Aba10042_14775	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
Aba10042_14780	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Aba10042_14795	COG4106	trans-aconitate 2-methyltransferase activity
Aba10042_14810	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Aba10042_14810	COG2226	methyltransferase
Aba10042_14810	COG0596	Alpha beta hydrolase
Aba10042_14815	COG1877	trehalose-phosphatase activity
Aba10042_14820	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
Aba10042_14825	COG2223	nitrite transmembrane transporter activity
Aba10042_14845	COG1196	nuclear chromosome segregation
Aba10042_14855	COG0730	response to heat
Aba10042_14870	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Aba10042_14880	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Aba10042_14935	COG0489	protein tyrosine kinase activity
Aba10042_14945	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aba10042_14945	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aba10042_14975	COG2515	1-aminocyclopropane-1-carboxylate deaminase
Aba10042_14980	COG2081	HI0933 family
Aba10042_14990	COG0668	transmembrane transport
Aba10042_15010	COG0583	DNA-binding transcription factor activity
Aba10042_15030	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Aba10042_15035	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Aba10042_15065	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
Aba10042_15100	COG2205	protein histidine kinase activity
Aba10042_15105	COG0745	RESPONSE REGULATOR receiver
Aba10042_15125	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Aba10042_15135	COG2205	protein histidine kinase activity
Aba10042_15215	COG4993	Dehydrogenase
Aba10042_15235	COG0384	phenazine biosynthesis protein PhzF
Aba10042_15265	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba10042_15270	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
Aba10042_15280	COG0583	DNA-binding transcription factor activity
Aba10042_15300	COG1473	amidohydrolase
Aba10042_15310	COG0583	DNA-binding transcription factor activity
Aba10042_15330	COG0583	DNA-binding transcription factor activity
Aba10042_15335	COG1053	succinate dehydrogenase
Aba10042_15345	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Aba10042_15350	COG2814	Major facilitator Superfamily
Aba10042_15355	COG1960	acyl-CoA dehydrogenase activity
Aba10042_15360	COG0583	DNA-binding transcription factor activity
Aba10042_15365	COG1063	alcohol dehydrogenase
Aba10042_15395	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Aba10042_15400	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Aba10042_15405	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Aba10042_15420	COG3667	copper resistance
Aba10042_15425	COG2132	Multicopper oxidase
Aba10042_15435	COG0561	phosphatase activity
Aba10042_15440	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Aba10042_15465	COG1214	PFAM Peptidase M22, glycoprotease
Aba10042_15520	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
Aba10042_15530	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Aba10042_15535	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Aba10042_15540	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Aba10042_15600	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Aba10042_15610	COG1846	Transcriptional regulator
Aba10042_15615	COG1764	response to oxidative stress
Aba10042_15655	COG0037	tRNA processing
Aba10042_15665	COG0248	Ppx GppA phosphatase
Aba10042_15695	COG0072	phenylalanine-tRNA ligase activity
Aba10042_15720	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Aba10042_15735	COG1238	metal cluster binding
Aba10042_15740	COG0625	glutathione transferase activity
Aba10042_15760	COG0318	PFAM AMP-dependent synthetase and ligase
Aba10042_15765	COG3028	Belongs to the UPF0307 family
Aba10042_15770	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
Aba10042_15790	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Aba10042_15795	COG0617	tRNA 3'-terminal CCA addition
Aba10042_15800	COG1555	photosystem II stabilization
Aba10042_15805	COG3956	TIGRFAM MazG family protein
Aba10042_15815	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Aba10042_15835	COG5002	protein histidine kinase activity
Aba10042_15835	COG2205	protein histidine kinase activity
Aba10042_15835	COG0784	Response regulator, receiver
Aba10042_15840	COG1024	Enoyl-CoA hydratase
Aba10042_15845	COG2084	Dehydrogenase
Aba10042_15850	COG3622	Belongs to the hyi family
Aba10042_15865	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
Aba10042_15870	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Aba10042_15875	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Aba10042_15880	COG0697	spore germination
Aba10042_15890	COG2814	Major facilitator Superfamily
Aba10042_15895	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Aba10042_15905	COG0583	DNA-binding transcription factor activity
Aba10042_15915	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Aba10042_15930	COG0084	hydrolase, TatD family'
Aba10042_15945	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
Aba10042_15980	COG0440	acetolactate synthase activity
Aba10042_15985	COG0028	Belongs to the TPP enzyme family
Aba10042_16010	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba10042_16015	COG1136	(ABC) transporter
Aba10042_16015	COG0577	efflux transmembrane transporter activity
Aba10042_16020	COG1538	Outer membrane efflux protein
Aba10042_16035	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
Aba10042_16040	COG1162	GTPase activity
Aba10042_16050	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Aba10042_16070	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Aba10042_16075	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_16115	COG2986	histidine ammonia-lyase
Aba10042_16130	COG0318	PFAM AMP-dependent synthetase and ligase
Aba10042_16140	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Aba10042_16145	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Aba10042_16185	COG1426	Protein conserved in bacteria
Aba10042_16220	COG0793	Belongs to the peptidase S41A family
Aba10042_16235	COG2267	carboxylic ester hydrolase activity
Aba10042_16245	COG1012	belongs to the aldehyde dehydrogenase family
Aba10042_16250	COG3265	gluconokinase activity
Aba10042_16260	COG0800	Aldolase
Aba10042_16270	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
Aba10042_16275	COG0280	phosphate acetyltransferase
Aba10042_16275	COG0857	belongs to the CobB CobQ family
Aba10042_16280	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
Aba10042_16280	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
Aba10042_16300	COG0740	serine-type endopeptidase activity
Aba10042_16310	COG4774	siderophore transport
Aba10042_16320	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Aba10042_16330	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Aba10042_16330	COG2813	Specifically methylates the guanine in position
Aba10042_16430	COG0788	formyltetrahydrofolate deformylase activity
Aba10042_16445	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Aba10042_16450	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Aba10042_16455	COG4651	solute:proton antiporter activity
Aba10042_16455	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Aba10042_16475	COG0724	RNA recognition motif
Aba10042_16480	COG0210	DNA helicase
Aba10042_16505	COG1733	regulation of RNA biosynthetic process
Aba10042_16525	COG1280	lysine exporter protein (LysE YggA)
Aba10042_16530	COG1560	Kdo2-lipid A biosynthetic process
Aba10042_16540	COG1301	dicarboxylic acid transport
Aba10042_16595	COG0473	3-isopropylmalate dehydrogenase activity
Aba10042_16660	COG0583	DNA-binding transcription factor activity
Aba10042_16670	COG0625	glutathione transferase activity
Aba10042_16675	COG2378	regulation of single-species biofilm formation
Aba10042_16680	COG0546	phosphoglycolate phosphatase activity
Aba10042_16695	COG1530	ribonuclease E activity
Aba10042_16715	COG0583	DNA-binding transcription factor activity
Aba10042_16720	COG4221	oxidoreductase activity
Aba10042_16725	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Aba10042_16735	COG0534	Mate efflux family protein
Aba10042_16750	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Aba10042_16790	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
Aba10042_16795	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba10042_16810	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Aba10042_16820	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
Aba10042_16820	COG0644	oxidoreductase
Aba10042_16825	COG0425	Belongs to the sulfur carrier protein TusA family
Aba10042_16830	COG4535	Mg2 and Co2 transporter CorC
Aba10042_16840	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aba10042_16860	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Aba10042_16865	COG0475	glutathione-regulated potassium exporter activity
Aba10042_16865	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Aba10042_16870	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
Aba10042_16880	COG0484	heat shock protein binding
Aba10042_16885	COG0789	Transcriptional regulator
Aba10042_16890	COG0598	Magnesium transport protein CorA
Aba10042_16910	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Aba10042_16915	COG1074	ATP-dependent DNA helicase activity
Aba10042_16920	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
Aba10042_16940	COG2226	methyltransferase
Aba10042_16955	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba10042_16960	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Aba10042_16975	COG2111	Na H antiporter
Aba10042_16975	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Aba10042_16980	COG1006	Multisubunit Na H antiporter MnhC subunit
Aba10042_16985	COG0651	ATP synthesis coupled electron transport
Aba10042_16995	COG2212	antiporter activity
Aba10042_17015	COG0195	Participates in both transcription termination and antitermination
Aba10042_17065	COG0237	dephospho-CoA kinase activity
Aba10042_17075	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Aba10042_17090	COG0497	DNA recombination
Aba10042_17100	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Aba10042_17130	COG2169	Transcriptional regulator
Aba10042_17130	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Aba10042_17135	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Aba10042_17205	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
Aba10042_17220	COG0326	Molecular chaperone. Has ATPase activity
Aba10042_17235	COG2056	Na+-H+ antiporter family
Aba10042_17240	COG0596	Alpha beta hydrolase
Aba10042_17335	COG0546	phosphoglycolate phosphatase activity
Aba10042_17340	COG1716	ATPase activity
Aba10042_17385	COG0181	hydroxymethylbilane synthase activity
Aba10042_17395	COG3275	phosphorelay sensor kinase activity
Aba10042_17415	COG1538	Outer membrane efflux protein
Aba10042_17420	COG0697	spore germination
Aba10042_17445	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Aba10042_17450	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Aba10042_17455	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Aba10042_17460	COG0772	Belongs to the SEDS family
Aba10042_17485	COG4974	Belongs to the 'phage' integrase family
Aba10042_17490	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Aba10042_17500	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Aba10042_17510	COG2197	response regulator
Aba10042_17525	COG0793	Belongs to the peptidase S41A family
Aba10042_17530	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Aba10042_17535	COG0795	lipopolysaccharide-transporting ATPase activity
Aba10042_17575	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Aba10042_17575	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Aba10042_17585	COG0004	ammonium transporteR
Aba10042_17590	COG0347	Belongs to the P(II) protein family
Aba10042_17600	COG0606	chelatase, subunit chli
Aba10042_17655	COG0659	secondary active sulfate transmembrane transporter activity
Aba10042_17660	COG0589	response to stress
Aba10042_17690	COG0606	chelatase, subunit chli
Aba10042_17695	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba10042_17705	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba10042_17720	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Aba10042_17735	COG0318	PFAM AMP-dependent synthetase and ligase
Aba10042_17745	COG0477	Major facilitator Superfamily
Aba10042_17750	COG2860	membrane
Aba10042_17760	COG1253	flavin adenine dinucleotide binding
Aba10042_17780	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Aba10042_17815	COG0655	NAD(P)H dehydrogenase (quinone) activity
Aba10042_17825	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Aba10042_17895	COG0758	DNA mediated transformation
Aba10042_17905	COG0697	spore germination
Aba10042_17910	COG1309	transcriptional regulator
Aba10042_17925	COG0386	Belongs to the glutathione peroxidase family
Aba10042_17990	COG1121	(ABC) transporter
Aba10042_17995	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Aba10042_18000	COG1280	lysine exporter protein (LysE YggA)
Aba10042_18005	COG2837	iron assimilation
Aba10042_18015	COG0281	malic enzyme
Aba10042_18060	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Aba10042_18060	COG0519	Catalyzes the synthesis of GMP from XMP
Aba10042_18065	COG4399	Belongs to the UPF0754 family
Aba10042_18070	COG2259	Doxx family
Aba10042_18075	COG0586	Pfam SNARE associated Golgi protein
Aba10042_18090	COG1192	Involved in chromosome partitioning
Aba10042_18100	COG0271	Belongs to the BolA IbaG family
Aba10042_18120	COG2267	carboxylic ester hydrolase activity
Aba10042_18140	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Aba10042_18140	COG3321	synthase
Aba10042_18140	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
Aba10042_18140	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Aba10042_18145	COG1960	acyl-CoA dehydrogenase activity
Aba10042_18155	COG2197	response regulator
Aba10042_18165	COG3916	Acyl-homoserine-lactone synthase
Aba10042_18170	COG0477	Major facilitator Superfamily
Aba10042_18175	COG1024	Enoyl-CoA hydratase
Aba10042_18180	COG1024	Enoyl-CoA hydratase
Aba10042_18185	COG1960	acyl-CoA dehydrogenase activity
Aba10042_18190	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Aba10042_18210	COG1113	amino acid transport
Aba10042_18215	COG1113	amino acid transport
Aba10042_18220	COG0251	oxidation-reduction process
Aba10042_18235	COG1522	sequence-specific DNA binding
Aba10042_18260	COG0564	pseudouridine synthase activity
Aba10042_18325	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
Aba10042_18340	COG1802	Transcriptional regulator
Aba10042_18350	COG1448	Aminotransferase
Aba10042_18355	COG0277	FAD linked oxidase domain protein
Aba10042_18365	COG2186	Transcriptional regulator
Aba10042_18375	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Aba10042_18385	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Aba10042_18400	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Aba10042_18405	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Aba10042_18410	COG1216	Glycosyl transferase, family 2
Aba10042_18430	COG0438	transferase activity, transferring glycosyl groups
Aba10042_18460	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
Aba10042_18490	COG0728	peptidoglycan biosynthetic process
Aba10042_18495	COG3023	N-Acetylmuramoyl-L-alanine amidase
Aba10042_18555	COG0546	phosphoglycolate phosphatase activity
Aba10042_18560	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_18580	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Aba10042_18585	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Aba10042_18590	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aba10042_18595	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Aba10042_18600	COG1116	anion transmembrane transporter activity
Aba10042_18605	COG1309	transcriptional regulator
Aba10042_18610	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Aba10042_18620	COG0196	riboflavin kinase activity
Aba10042_18625	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Aba10042_18635	COG1047	Peptidyl-prolyl cis-trans
Aba10042_18675	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Aba10042_18730	COG2951	lytic endotransglycosylase activity
Aba10042_18735	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Aba10042_18755	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Aba10042_18765	COG0671	phosphoesterase, PA-phosphatase related
Aba10042_18770	COG0861	Integral membrane protein TerC family
Aba10042_18780	COG0754	glutathionylspermidine amidase activity
Aba10042_18790	COG0402	S-adenosylhomocysteine deaminase activity
Aba10042_18805	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Aba10042_18810	COG1230	cation diffusion facilitator family transporter
Aba10042_18825	COG0706	membrane insertase activity
Aba10042_18840	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Aba10042_18850	COG0592	DNA-directed DNA polymerase activity
Aba10042_18860	COG0187	DNA topoisomerase II activity
Aba10042_18870	COG0586	Pfam SNARE associated Golgi protein
Aba10042_18875	COG0488	(ABC) transporter
Aba10042_18900	COG0596	Alpha beta hydrolase
Aba10042_18905	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
Aba10042_18910	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Aba10042_18955	COG0733	neurotransmitter:sodium symporter activity
Aba10042_18995	COG2233	PERMEase
Aba10042_19010	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba10042_19045	COG2814	Major facilitator Superfamily
Aba10042_19050	COG0656	L-ascorbic acid biosynthetic process
Aba10042_19055	COG0583	DNA-binding transcription factor activity
Aba10042_19070	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba10042_19075	COG1064	alcohol dehydrogenase
Aba10042_19080	COG2818	Glycosylase
Aba10042_19095	COG1194	a g-specific adenine glycosylase
Aba10042_19115	COG2983	Belongs to the UPF0260 family
Aba10042_19120	COG2133	pyrroloquinoline quinone binding
Aba10042_19125	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Aba10042_19130	COG2116	formate transmembrane transporter activity
Aba10042_19150	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba10042_19155	COG1335	isochorismatase
Aba10042_19160	COG0385	Bile acid
Aba10042_19165	COG0534	Mate efflux family protein
Aba10042_19170	COG1683	Conserved Protein
Aba10042_19190	COG0625	glutathione transferase activity
Aba10042_19200	COG1113	amino acid transport
Aba10042_19210	COG0523	cobalamin synthesis protein
Aba10042_19220	COG2188	Transcriptional regulator
Aba10042_19250	COG0010	Belongs to the arginase family
Aba10042_19265	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Aba10042_19270	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Aba10042_19280	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
Aba10042_19285	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Aba10042_19390	COG0534	Mate efflux family protein
Aba10042_19395	COG0436	Aminotransferase
Aba10042_19400	COG2733	membrane
Aba10042_19415	COG2918	glutathione biosynthetic process
Aba10042_19425	COG3501	Rhs element vgr protein
Aba10042_19430	COG1388	LysM domain
Aba10042_19430	COG0791	NLP P60 protein
Aba10042_19450	COG3150	esterase
Aba10042_19460	COG1028	Short-chain dehydrogenase reductase Sdr
Aba10042_19465	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
Aba10042_19475	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba10042_19485	COG2233	PERMEase
Aba10042_19490	COG2351	hydroxyisourate hydrolase activity
Aba10042_19610	COG0589	response to stress
Aba10042_19695	COG1525	nuclease
Aba10042_19755	COG1475	DNA binding
Aba10042_19775	COG3853	Toxic anion resistance protein (TelA)
Aba10042_19870	COG0484	heat shock protein binding
Aba10042_19965	COG2826	transposase and inactivated derivatives, IS30 family
Aba10042_19980	COG2826	transposase and inactivated derivatives, IS30 family
Aba10042_20015	COG0741	lytic transglycosylase activity
Aba10042_20050	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Aba10042_20170	COG0589	response to stress
Aba10042_20175	COG0659	secondary active sulfate transmembrane transporter activity