locus-tag class description H2784_00005 PF00308 Bacterial dnaA protein H2784_00005 PF08299 Bacterial dnaA protein helix-turn-helix H2784_00005 PF11638 DnaA N-terminal domain H2784_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain H2784_00010 PF02767 DNA polymerase III beta subunit, central domain H2784_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain H2784_00015 PF02463 RecF/RecN/SMC N terminal domain H2784_00020 PF00204 DNA gyrase B H2784_00020 PF00986 DNA gyrase B subunit, carboxyl terminus H2784_00020 PF18053 DNA gyrase B subunit insert domain H2784_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_00020 PF01751 Toprim domain H2784_00030 PF09335 SNARE associated Golgi protein H2784_00035 PF00005 ABC transporter H2784_00035 PF12848 ABC transporter H2784_00055 PF01521 Iron-sulphur cluster biosynthesis H2784_00060 PF00561 alpha/beta hydrolase fold H2784_00065 PF03702 Anhydro-N-acetylmuramic acid kinase H2784_00070 PF00579 tRNA synthetases class I (W and Y) H2784_00115 PF00209 Sodium:neurotransmitter symporter family H2784_00125 PF01189 16S rRNA methyltransferase RsmB/F H2784_00125 PF01029 NusB family H2784_00130 PF02911 Formyl transferase, C-terminal domain H2784_00130 PF00551 Formyl transferase H2784_00135 PF00920 Dehydratase family H2784_00150 PF03466 LysR substrate binding domain H2784_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_00155 PF00860 Permease family H2784_00160 PF00311 Phosphoenolpyruvate carboxylase H2784_00165 PF08361 MAATS-type transcriptional repressor, C-terminal region H2784_00165 PF00440 Bacterial regulatory proteins, tetR family H2784_00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2784_00175 PF00873 AcrB/AcrD/AcrF family H2784_00185 PF00684 DnaJ central domain H2784_00185 PF00226 DnaJ domain H2784_00185 PF01556 DnaJ C terminal domain H2784_00195 PF01113 Dihydrodipicolinate reductase, N-terminus H2784_00195 PF05173 Dihydrodipicolinate reductase, C-terminus H2784_00205 PF07690 Major Facilitator Superfamily H2784_00210 PF00248 Aldo/keto reductase family H2784_00215 PF03466 LysR substrate binding domain H2784_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_00230 PF00155 Aminotransferase class I and II H2784_00230 PF00392 Bacterial regulatory proteins, gntR family H2784_00235 PF00107 Zinc-binding dehydrogenase H2784_00235 PF08240 Alcohol dehydrogenase GroES-like domain H2784_00240 PF03352 Methyladenine glycosylase H2784_00255 PF14815 NUDIX domain H2784_00255 PF00730 HhH-GPD superfamily base excision DNA repair protein H2784_00255 PF00633 Helix-hairpin-helix motif H2784_00255 PF10576 Iron-sulfur binding domain of endonuclease III H2784_00270 PF07043 Protein of unknown function (DUF1328) H2784_00275 PF03692 Putative zinc- or iron-chelating domain H2784_00280 PF07995 Glucose / Sorbosone dehydrogenase H2784_00285 PF12002 MgsA AAA+ ATPase C terminal H2784_00285 PF00004 ATPase family associated with various cellular activities (AAA) H2784_00285 PF16193 AAA C-terminal domain H2784_00290 PF01226 Formate/nitrite transporter H2784_00300 PF01259 SAICAR synthetase H2784_00310 PF00701 Dihydrodipicolinate synthetase family H2784_00315 PF00857 Isochorismatase family H2784_00320 PF01758 Sodium Bile acid symporter family H2784_00325 PF01554 MatE H2784_00330 PF04463 Protein of unknown function (DUF523) H2784_00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H2784_00345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H2784_00350 PF14497 Glutathione S-transferase, C-terminal domain H2784_00350 PF02798 Glutathione S-transferase, N-terminal domain H2784_00360 PF00324 Amino acid permease H2784_00370 PF02492 CobW/HypB/UreG, nucleotide-binding domain H2784_00370 PF07683 Cobalamin synthesis protein cobW C-terminal domain H2784_00380 PF00392 Bacterial regulatory proteins, gntR family H2784_00380 PF07702 UTRA domain H2784_00385 PF05962 HutD H2784_00390 PF01175 Urocanase Rossmann-like domain H2784_00390 PF17392 Urocanase C-terminal domain H2784_00390 PF17391 Urocanase N-terminal domain H2784_00395 PF00221 Aromatic amino acid lyase H2784_00400 PF00324 Amino acid permease H2784_00405 PF01979 Amidohydrolase family H2784_00410 PF00491 Arginase family H2784_00425 PF01177 Asp/Glu/Hydantoin racemase H2784_00430 PF01380 SIS domain H2784_00435 PF12804 MobA-like NTP transferase domain H2784_00435 PF14602 Hexapeptide repeat of succinyl-transferase H2784_00435 PF00132 Bacterial transferase hexapeptide (six repeats) H2784_00440 PF04608 Phosphatidylglycerophosphatase A H2784_00445 PF02769 AIR synthase related protein, C-terminal domain H2784_00445 PF00586 AIR synthase related protein, N-terminal domain H2784_00450 PF01029 NusB family H2784_00455 PF00885 6,7-dimethyl-8-ribityllumazine synthase H2784_00460 PF00925 GTP cyclohydrolase II H2784_00460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H2784_00485 PF02580 D-Tyr-tRNA(Tyr) deacylase H2784_00490 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H2784_00490 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H2784_00495 PF00581 Rhodanese-like domain H2784_00500 PF02666 Phosphatidylserine decarboxylase H2784_00510 PF11808 Phosphate regulon sensor protein PhoR H2784_00510 PF00512 His Kinase A (phospho-acceptor) domain H2784_00510 PF00989 PAS fold H2784_00510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_00515 PF00486 Transcriptional regulatory protein, C terminal H2784_00515 PF00072 Response regulator receiver domain H2784_00525 PF00106 short chain dehydrogenase H2784_00530 PF01554 MatE H2784_00535 PF00155 Aminotransferase class I and II H2784_00540 PF04286 Protein of unknown function (DUF445) H2784_00555 PF04262 Glutamate-cysteine ligase H2784_00560 PF02600 Disulfide bond formation protein DsbB H2784_00565 PF13296 Putative type VI secretion system Rhs element Vgr H2784_00565 PF04717 Type VI secretion system, phage-baseplate injector H2784_00565 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H2784_00570 PF00182 Chitinase class I H2784_00585 PF05728 Uncharacterised protein family (UPF0227) H2784_00590 PF00204 DNA gyrase B H2784_00590 PF01751 Toprim domain H2784_00590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_00590 PF00986 DNA gyrase B subunit, carboxyl terminus H2784_00595 PF04115 Ureidoglycolate lyase H2784_00600 PF03561 Allantoicase repeat H2784_00605 PF01494 FAD binding domain H2784_00615 PF00860 Permease family H2784_00620 PF00576 HIUase/Transthyretin family H2784_00650 PF02683 Cytochrome C biogenesis protein transmembrane region H2784_00650 PF11412 Disulphide bond corrector protein DsbC H2784_00655 PF00990 Diguanylate cyclase, GGDEF domain H2784_00655 PF07694 5TMR of 5TMR-LYT H2784_00660 PF07859 alpha/beta hydrolase fold H2784_00670 PF03960 ArsC family H2784_00675 PF03372 Endonuclease/Exonuclease/phosphatase family H2784_00680 PF00156 Phosphoribosyl transferase domain H2784_00685 PF00593 TonB dependent receptor H2784_00685 PF07715 TonB-dependent Receptor Plug Domain H2784_00695 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H2784_00695 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H2784_00700 PF03033 Glycosyltransferase family 28 N-terminal domain H2784_00700 PF04101 Glycosyltransferase family 28 C-terminal domain H2784_00705 PF08245 Mur ligase middle domain H2784_00705 PF02875 Mur ligase family, glutamate ligase domain H2784_00705 PF01225 Mur ligase family, catalytic domain H2784_00710 PF01820 D-ala D-ala ligase N-terminus H2784_00710 PF07478 D-ala D-ala ligase C-terminus H2784_00715 PF03799 Cell division protein FtsQ H2784_00715 PF08478 POTRA domain, FtsQ-type H2784_00720 PF02491 SHS2 domain inserted in FTSA H2784_00725 PF00091 Tubulin/FtsZ family, GTPase domain H2784_00725 PF12327 FtsZ family, C-terminal domain H2784_00730 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H2784_00740 PF01551 Peptidase family M23 H2784_00745 PF17831 Pyruvate dehydrogenase E1 component middle domain H2784_00745 PF00456 Transketolase, thiamine diphosphate binding domain H2784_00750 PF00364 Biotin-requiring enzyme H2784_00750 PF02817 e3 binding domain H2784_00750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H2784_00760 PF01169 Uncharacterized protein family UPF0016 H2784_00765 PF07715 TonB-dependent Receptor Plug Domain H2784_00765 PF00593 TonB dependent receptor H2784_00770 PF01613 Flavin reductase like domain H2784_00770 PF00258 Flavodoxin H2784_00775 PF03692 Putative zinc- or iron-chelating domain H2784_00780 PF00478 IMP dehydrogenase / GMP reductase domain H2784_00780 PF00571 CBS domain H2784_00785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H2784_00785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H2784_00785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H2784_00785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H2784_00790 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H2784_00790 PF01243 Pyridoxamine 5'-phosphate oxidase H2784_00795 PF01368 DHH family H2784_00795 PF17768 RecJ OB domain H2784_00795 PF02272 DHHA1 domain H2784_00820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H2784_00825 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H2784_00830 PF04452 RNA methyltransferase H2784_00835 PF00924 Mechanosensitive ion channel H2784_00845 PF16177 Acetyl-coenzyme A synthetase N-terminus H2784_00845 PF00501 AMP-binding enzyme H2784_00845 PF13193 AMP-binding enzyme C-terminal domain H2784_00850 PF00857 Isochorismatase family H2784_00855 PF01037 Lrp/AsnC ligand binding domain H2784_00860 PF00296 Luciferase-like monooxygenase H2784_00865 PF03358 NADPH-dependent FMN reductase H2784_00870 PF00196 Bacterial regulatory proteins, luxR family H2784_00870 PF00072 Response regulator receiver domain H2784_00880 PF00072 Response regulator receiver domain H2784_00880 PF01627 Hpt domain H2784_00880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_00880 PF00512 His Kinase A (phospho-acceptor) domain H2784_00880 PF00672 HAMP domain H2784_00885 PF04341 Protein of unknown function, DUF485 H2784_00890 PF00474 Sodium:solute symporter family H2784_00900 PF02028 BCCT, betaine/carnitine/choline family transporter H2784_00910 PF00990 Diguanylate cyclase, GGDEF domain H2784_00915 PF00005 ABC transporter H2784_00915 PF17760 UvrA interaction domain H2784_00915 PF17755 UvrA DNA-binding domain H2784_00920 PF00440 Bacterial regulatory proteins, tetR family H2784_00920 PF16925 Tetracyclin repressor-like, C-terminal domain H2784_00925 PF00107 Zinc-binding dehydrogenase H2784_00925 PF08240 Alcohol dehydrogenase GroES-like domain H2784_00935 PF06942 GlpM protein H2784_00940 PF02581 Thiamine monophosphate synthase H2784_00940 PF03070 TENA/THI-4/PQQC family H2784_00940 PF08543 Phosphomethylpyrimidine kinase H2784_00950 PF07690 Major Facilitator Superfamily H2784_00955 PF00436 Single-strand binding protein family H2784_00960 PF13533 Biotin-lipoyl like H2784_00965 PF00664 ABC transporter transmembrane region H2784_00965 PF00005 ABC transporter H2784_00965 PF03412 Peptidase C39 family H2784_00990 PF03591 AzlC protein H2784_01000 PF00324 Amino acid permease H2784_01005 PF00155 Aminotransferase class I and II H2784_01005 PF00392 Bacterial regulatory proteins, gntR family H2784_01010 PF00202 Aminotransferase class-III H2784_01015 PF00171 Aldehyde dehydrogenase family H2784_01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_01025 PF00857 Isochorismatase family H2784_01030 PF02678 Pirin H2784_01030 PF05726 Pirin C-terminal cupin domain H2784_01035 PF01593 Flavin containing amine oxidoreductase H2784_01055 PF07690 Major Facilitator Superfamily H2784_01060 PF03466 LysR substrate binding domain H2784_01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_01080 PF00248 Aldo/keto reductase family H2784_01085 PF02311 AraC-like ligand binding domain H2784_01085 PF12833 Helix-turn-helix domain H2784_01095 PF04245 37-kD nucleoid-associated bacterial protein H2784_01110 PF01638 HxlR-like helix-turn-helix H2784_01115 PF02525 Flavodoxin-like fold H2784_01140 PF02705 K+ potassium transporter H2784_01165 PF00230 Major intrinsic protein H2784_01180 PF00977 Histidine biosynthesis protein H2784_01185 PF01636 Phosphotransferase enzyme family H2784_01210 PF00005 ABC transporter H2784_01210 PF00664 ABC transporter transmembrane region H2784_01215 PF00977 Histidine biosynthesis protein H2784_01230 PF00117 Glutamine amidotransferase class-I H2784_01235 PF00475 Imidazoleglycerol-phosphate dehydratase H2784_01255 PF00583 Acetyltransferase (GNAT) family H2784_01260 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain H2784_01260 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain H2784_01270 PF00672 HAMP domain H2784_01270 PF00512 His Kinase A (phospho-acceptor) domain H2784_01270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_01275 PF00486 Transcriptional regulatory protein, C terminal H2784_01275 PF00072 Response regulator receiver domain H2784_01280 PF17674 HHH domain H2784_01280 PF00575 S1 RNA binding domain H2784_01280 PF09371 Tex-like protein N-terminal domain H2784_01280 PF16921 Tex protein YqgF-like domain H2784_01285 PF01740 STAS domain H2784_01285 PF00916 Sulfate permease family H2784_01290 PF00106 short chain dehydrogenase H2784_01295 PF01053 Cys/Met metabolism PLP-dependent enzyme H2784_01300 PF12848 ABC transporter H2784_01300 PF00005 ABC transporter H2784_01325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2784_01325 PF00529 HlyD membrane-fusion protein of T1SS H2784_01330 PF00873 AcrB/AcrD/AcrF family H2784_01335 PF01545 Cation efflux family H2784_01365 PF00324 Amino acid permease H2784_01380 PF00749 tRNA synthetases class I (E and Q), catalytic domain H2784_01395 PF01795 MraW methylase family H2784_01405 PF00905 Penicillin binding protein transpeptidase domain H2784_01405 PF03717 Penicillin-binding Protein dimerisation domain H2784_01410 PF01225 Mur ligase family, catalytic domain H2784_01410 PF08245 Mur ligase middle domain H2784_01410 PF02875 Mur ligase family, glutamate ligase domain H2784_01415 PF08245 Mur ligase middle domain H2784_01415 PF02875 Mur ligase family, glutamate ligase domain H2784_01415 PF01225 Mur ligase family, catalytic domain H2784_01420 PF00953 Glycosyl transferase family 4 H2784_01430 PF13847 Methyltransferase domain H2784_01435 PF17092 Penicillin-binding protein OB-like domain H2784_01435 PF00912 Transglycosylase H2784_01435 PF00905 Penicillin binding protein transpeptidase domain H2784_01440 PF11104 Type IV pilus assembly protein PilM; H2784_01445 PF05137 Fimbrial assembly protein (PilN) H2784_01450 PF04350 Pilus assembly protein, PilO H2784_01460 PF07660 Secretin and TonB N terminus short domain H2784_01460 PF11741 AMIN domain H2784_01460 PF00263 Bacterial type II and III secretion system protein H2784_01460 PF03958 Bacterial type II/III secretion system short domain H2784_01465 PF01202 Shikimate kinase H2784_01470 PF01761 3-dehydroquinate synthase H2784_01480 PF04898 Glutamate synthase central domain H2784_01480 PF01645 Conserved region in glutamate synthase H2784_01480 PF01493 GXGXG motif H2784_01480 PF00310 Glutamine amidotransferases class-II H2784_01485 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_01485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H2784_01495 PF04011 LemA family H2784_01500 PF04536 TPM domain H2784_01510 PF00114 Pilin (bacterial filament) H2784_01510 PF07963 Prokaryotic N-terminal methylation motif H2784_01520 PF15864 Protein glycosylation ligase H2784_01520 PF11846 Virulence factor membrane-bound polymerase, C-terminal H2784_01520 PF04932 O-Antigen ligase H2784_01525 PF00210 Ferritin-like domain H2784_01530 PF04324 BFD-like [2Fe-2S] binding domain H2784_01535 PF01042 Endoribonuclease L-PSP H2784_01540 PF04607 Region found in RelA / SpoT proteins H2784_01540 PF02824 TGS domain H2784_01540 PF13291 ACT domain H2784_01550 PF01192 RNA polymerase Rpb6 H2784_01555 PF00625 Guanylate kinase H2784_01560 PF02401 LytB protein H2784_01600 PF00886 Ribosomal protein S16 H2784_01605 PF01782 RimM N-terminal domain H2784_01605 PF05239 PRC-barrel domain H2784_01610 PF01746 tRNA (Guanine-1)-methyltransferase H2784_01615 PF01245 Ribosomal protein L19 H2784_01620 PF00561 alpha/beta hydrolase fold H2784_01625 PF03280 Proteobacterial lipase chaperone protein H2784_01630 PF16198 tRNA pseudouridylate synthase B C-terminal domain H2784_01630 PF09157 Pseudouridine synthase II TruB, C-terminal H2784_01630 PF01509 TruB family pseudouridylate synthase (N terminal domain) H2784_01635 PF01925 Sulfite exporter TauE/SafE H2784_01645 PF00892 EamA-like transporter family H2784_01650 PF00892 EamA-like transporter family H2784_01655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H2784_01655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H2784_01660 PF02913 FAD linked oxidases, C-terminal domain H2784_01660 PF01565 FAD binding domain H2784_01670 PF03992 Antibiotic biosynthesis monooxygenase H2784_01675 PF02525 Flavodoxin-like fold H2784_01685 PF07690 Major Facilitator Superfamily H2784_01690 PF12805 FUSC-like inner membrane protein yccS H2784_01695 PF00080 Copper/zinc superoxide dismutase (SODC) H2784_01700 PF01594 AI-2E family transporter H2784_01705 PF13614 AAA domain H2784_01725 PF08241 Methyltransferase domain H2784_01735 PF00324 Amino acid permease H2784_01750 PF04958 Arginine N-succinyltransferase beta subunit H2784_01755 PF00171 Aldehyde dehydrogenase family H2784_01760 PF04996 Succinylarginine dihydrolase H2784_01765 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H2784_01780 PF05922 Peptidase inhibitor I9 H2784_01780 PF00082 Subtilase family H2784_01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_01795 PF03466 LysR substrate binding domain H2784_01800 PF00892 EamA-like transporter family H2784_01820 PF02092 Glycyl-tRNA synthetase beta subunit H2784_01820 PF05746 DALR anticodon binding domain H2784_01825 PF02091 Glycyl-tRNA synthetase alpha subunit H2784_01830 PF07690 Major Facilitator Superfamily H2784_01845 PF00571 CBS domain H2784_01850 PF04024 PspC domain H2784_01860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_01860 PF12806 Acetyl-CoA dehydrogenase C-terminal like H2784_01860 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_01860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_01870 PF08501 Shikimate dehydrogenase substrate binding domain H2784_01870 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H2784_01870 PF01488 Shikimate / quinate 5-dehydrogenase H2784_01875 PF01218 Coproporphyrinogen III oxidase H2784_01880 PF00925 GTP cyclohydrolase II H2784_01885 PF02780 Transketolase, C-terminal domain H2784_01885 PF02779 Transketolase, pyrimidine binding domain H2784_01885 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H2784_01890 PF00459 Inositol monophosphatase family H2784_01895 PF03880 DbpA RNA binding domain H2784_01895 PF00270 DEAD/DEAH box helicase H2784_01895 PF12343 Cold shock protein DEAD box A H2784_01895 PF00271 Helicase conserved C-terminal domain H2784_01905 PF00005 ABC transporter H2784_01910 PF02405 Permease MlaE H2784_01920 PF05494 MlaC protein H2784_01930 PF01544 CorA-like Mg2+ transporter protein H2784_01935 PF03641 Possible lysine decarboxylase H2784_01940 PF00293 NUDIX domain H2784_01945 PF00156 Phosphoribosyl transferase domain H2784_01950 PF00271 Helicase conserved C-terminal domain H2784_01950 PF00270 DEAD/DEAH box helicase H2784_01950 PF17191 RecG wedge domain H2784_01965 PF01553 Acyltransferase H2784_01975 PF00375 Sodium:dicarboxylate symporter family H2784_01985 PF01926 50S ribosome-binding GTPase H2784_01990 PF02082 Transcriptional regulator H2784_01995 PF00175 Oxidoreductase NAD-binding domain H2784_01995 PF00042 Globin H2784_01995 PF00970 Oxidoreductase FAD-binding domain H2784_02005 PF05872 Bacterial protein of unknown function (DUF853) H2784_02010 PF01053 Cys/Met metabolism PLP-dependent enzyme H2784_02015 PF00117 Glutamine amidotransferase class-I H2784_02020 PF00338 Ribosomal protein S10p/S20e H2784_02025 PF00297 Ribosomal protein L3 H2784_02030 PF00573 Ribosomal protein L4/L1 family H2784_02035 PF00276 Ribosomal protein L23 H2784_02040 PF03947 Ribosomal Proteins L2, C-terminal domain H2784_02040 PF00181 Ribosomal Proteins L2, RNA binding domain H2784_02045 PF00203 Ribosomal protein S19 H2784_02050 PF00237 Ribosomal protein L22p/L17e H2784_02055 PF00189 Ribosomal protein S3, C-terminal domain H2784_02055 PF07650 KH domain H2784_02060 PF00252 Ribosomal protein L16p/L10e H2784_02065 PF00831 Ribosomal L29 protein H2784_02070 PF00366 Ribosomal protein S17 H2784_02075 PF00238 Ribosomal protein L14p/L23e H2784_02080 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H2784_02080 PF00467 KOW motif H2784_02085 PF00281 Ribosomal protein L5 H2784_02085 PF00673 ribosomal L5P family C-terminus H2784_02090 PF00253 Ribosomal protein S14p/S29e H2784_02095 PF00410 Ribosomal protein S8 H2784_02100 PF00347 Ribosomal protein L6 H2784_02105 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H2784_02110 PF00333 Ribosomal protein S5, N-terminal domain H2784_02110 PF03719 Ribosomal protein S5, C-terminal domain H2784_02115 PF00327 Ribosomal protein L30p/L7e H2784_02120 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H2784_02125 PF00344 SecY translocase H2784_02130 PF00444 Ribosomal protein L36 H2784_02135 PF00416 Ribosomal protein S13/S18 H2784_02140 PF00411 Ribosomal protein S11 H2784_02145 PF00163 Ribosomal protein S4/S9 N-terminal domain H2784_02145 PF01479 S4 domain H2784_02150 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H2784_02150 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H2784_02150 PF01000 RNA polymerase Rpb3/RpoA insert domain H2784_02155 PF01196 Ribosomal protein L17 H2784_02160 PF00743 Flavin-binding monooxygenase-like H2784_02165 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_02165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_02165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_02170 PF03937 Flavinator of succinate dehydrogenase H2784_02200 PF09526 Probable metal-binding protein (DUF2387) H2784_02205 PF01432 Peptidase family M3 H2784_02210 PF17876 Cold shock domain H2784_02210 PF08461 Ribonuclease R winged-helix domain H2784_02210 PF08206 Ribonuclease B OB domain H2784_02210 PF00773 RNB domain H2784_02210 PF00575 S1 RNA binding domain H2784_02255 PF01557 Fumarylacetoacetate (FAA) hydrolase family H2784_02260 PF12833 Helix-turn-helix domain H2784_02265 PF00892 EamA-like transporter family H2784_02270 PF03631 Virulence factor BrkB H2784_02275 PF03358 NADPH-dependent FMN reductase H2784_02300 PF02130 Uncharacterized protein family UPF0054 H2784_02305 PF02562 PhoH-like protein H2784_02310 PF04055 Radical SAM superfamily H2784_02310 PF01938 TRAM domain H2784_02310 PF00919 Uncharacterized protein family UPF0004 H2784_02315 PF01551 Peptidase family M23 H2784_02315 PF10145 Phage-related minor tail protein H2784_02315 PF01464 Transglycosylase SLT domain H2784_02325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H2784_02325 PF00056 lactate/malate dehydrogenase, NAD binding domain H2784_02345 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H2784_02350 PF01066 CDP-alcohol phosphatidyltransferase H2784_02395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_02395 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_02395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_02400 PF17932 Tetracyclin repressor-like, C-terminal domain H2784_02400 PF00440 Bacterial regulatory proteins, tetR family H2784_02415 PF01039 Carboxyl transferase domain H2784_02420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_02420 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_02420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_02430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H2784_02430 PF00364 Biotin-requiring enzyme H2784_02430 PF00289 Biotin carboxylase, N-terminal domain H2784_02430 PF02785 Biotin carboxylase C-terminal domain H2784_02440 PF04386 Stringent starvation protein B H2784_02445 PF00043 Glutathione S-transferase, C-terminal domain H2784_02445 PF13417 Glutathione S-transferase, N-terminal domain H2784_02450 PF00380 Ribosomal protein S9/S16 H2784_02455 PF00572 Ribosomal protein L13 H2784_02460 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H2784_02465 PF00398 Ribosomal RNA adenine dimethylase H2784_02470 PF00149 Calcineurin-like phosphoesterase H2784_02490 PF16360 GTP-binding GTPase Middle Region H2784_02490 PF13167 GTP-binding GTPase N-terminal H2784_02490 PF01926 50S ribosome-binding GTPase H2784_02500 PF13091 PLD-like domain H2784_02505 PF00149 Calcineurin-like phosphoesterase H2784_02505 PF10518 TAT (twin-arginine translocation) pathway signal sequence H2784_02510 PF00691 OmpA family H2784_02510 PF01389 OmpA-like transmembrane domain H2784_02515 PF17152 Periplasmic sensor domain H2784_02515 PF00990 Diguanylate cyclase, GGDEF domain H2784_02550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H2784_02550 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_02560 PF00753 Metallo-beta-lactamase superfamily H2784_02560 PF04273 Putative phosphatase (DUF442) H2784_02565 PF00561 alpha/beta hydrolase fold H2784_02570 PF00085 Thioredoxin H2784_02575 PF03061 Thioesterase superfamily H2784_02585 PF04461 Protein of unknown function (DUF520) H2784_02595 PF01266 FAD dependent oxidoreductase H2784_02595 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H2784_02605 PF03795 YCII-related domain H2784_02610 PF04279 Intracellular septation protein A H2784_02615 PF02811 PHP domain H2784_02620 PF01062 Bestrophin, RFP-TM, chloride channel H2784_02625 PF04002 RadC-like JAB domain H2784_02630 PF04127 DNA / pantothenate metabolism flavoprotein H2784_02630 PF02441 Flavoprotein H2784_02635 PF07549 SecD/SecF GG Motif H2784_02635 PF02355 Protein export membrane protein H2784_02640 PF02355 Protein export membrane protein H2784_02640 PF13721 SecD export protein N-terminal TM region H2784_02640 PF07549 SecD/SecF GG Motif H2784_02645 PF02699 Preprotein translocase subunit H2784_02650 PF01702 Queuine tRNA-ribosyltransferase H2784_02665 PF02547 Queuosine biosynthesis protein H2784_02675 PF00512 His Kinase A (phospho-acceptor) domain H2784_02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_02675 PF07689 KaiB domain H2784_02680 PF03710 Glutamate-ammonia ligase adenylyltransferase H2784_02680 PF08335 GlnD PII-uridylyltransferase H2784_02685 PF01063 Amino-transferase class IV H2784_02700 PF01522 Polysaccharide deacetylase H2784_02705 PF00535 Glycosyl transferase family 2 H2784_02710 PF13439 Glycosyltransferase Family 4 H2784_02710 PF00534 Glycosyl transferases group 1 H2784_02735 PF17101 Stealth protein CR1, conserved region 1 H2784_02735 PF11380 Stealth protein CR2, conserved region 2 H2784_02735 PF17102 Stealth protein CR3, conserved region 3 H2784_02740 PF02938 GAD domain H2784_02740 PF01336 OB-fold nucleic acid binding domain H2784_02740 PF00152 tRNA synthetases class II (D, K and N) H2784_02750 PF00593 TonB dependent receptor H2784_02750 PF07715 TonB-dependent Receptor Plug Domain H2784_02770 PF06146 Phosphate-starvation-inducible E H2784_02775 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_02775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_02775 PF12806 Acetyl-CoA dehydrogenase C-terminal like H2784_02775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_02780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_02780 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_02780 PF12806 Acetyl-CoA dehydrogenase C-terminal like H2784_02780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_02790 PF00512 His Kinase A (phospho-acceptor) domain H2784_02790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_02790 PF00672 HAMP domain H2784_02795 PF00486 Transcriptional regulatory protein, C terminal H2784_02795 PF00072 Response regulator receiver domain H2784_02800 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H2784_02820 PF01923 Cobalamin adenosyltransferase H2784_02825 PF07715 TonB-dependent Receptor Plug Domain H2784_02825 PF00593 TonB dependent receptor H2784_02830 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H2784_02835 PF00291 Pyridoxal-phosphate dependent enzyme H2784_02860 PF00290 Tryptophan synthase alpha chain H2784_02865 PF01039 Carboxyl transferase domain H2784_02870 PF08245 Mur ligase middle domain H2784_02870 PF02875 Mur ligase family, glutamate ligase domain H2784_02885 PF00753 Metallo-beta-lactamase superfamily H2784_02890 PF00578 AhpC/TSA family H2784_02890 PF10417 C-terminal domain of 1-Cys peroxiredoxin H2784_02895 PF01043 SecA preprotein cross-linking domain H2784_02895 PF07517 SecA DEAD-like domain H2784_02895 PF02810 SEC-C motif H2784_02895 PF07516 SecA Wing and Scaffold domain H2784_02905 PF00083 Sugar (and other) transporter H2784_02905 PF07690 Major Facilitator Superfamily H2784_02910 PF03006 Haemolysin-III related H2784_02920 PF13673 Acetyltransferase (GNAT) domain H2784_02935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H2784_02935 PF00378 Enoyl-CoA hydratase/isomerase H2784_02935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H2784_02940 PF02803 Thiolase, C-terminal domain H2784_02940 PF00108 Thiolase, N-terminal domain H2784_02945 PF02311 AraC-like ligand binding domain H2784_02945 PF12833 Helix-turn-helix domain H2784_02950 PF02515 CoA-transferase family III H2784_02955 PF04966 Carbohydrate-selective porin, OprB family H2784_02960 PF01011 PQQ enzyme repeat H2784_02965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H2784_02965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H2784_02975 PF00893 Small Multidrug Resistance protein H2784_02985 PF00108 Thiolase, N-terminal domain H2784_02985 PF02803 Thiolase, C-terminal domain H2784_02995 PF00691 OmpA family H2784_02995 PF13505 Outer membrane protein beta-barrel domain H2784_03005 PF01139 tRNA-splicing ligase RtcB H2784_03010 PF00324 Amino acid permease H2784_03015 PF08468 Methyltransferase small domain N-terminal H2784_03015 PF05175 Methyltransferase small domain H2784_03020 PF00860 Permease family H2784_03025 PF00009 Elongation factor Tu GTP binding domain H2784_03025 PF03144 Elongation factor Tu domain 2 H2784_03025 PF00679 Elongation factor G C-terminus H2784_03030 PF01741 Large-conductance mechanosensitive channel, MscL H2784_03045 PF06827 Zinc finger found in FPG and IleRS H2784_03045 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H2784_03045 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H2784_03050 PF02245 Methylpurine-DNA glycosylase (MPG) H2784_03055 PF00593 TonB dependent receptor H2784_03055 PF07715 TonB-dependent Receptor Plug Domain H2784_03060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H2784_03075 PF13098 Thioredoxin-like domain H2784_03075 PF10411 Disulfide bond isomerase protein N-terminus H2784_03080 PF01571 Aminomethyltransferase folate-binding domain H2784_03090 PF04343 Protein of unknown function, DUF488 H2784_03095 PF08274 PhnA Zinc-Ribbon H2784_03095 PF03831 PhnA domain H2784_03100 PF07411 Domain of unknown function (DUF1508) H2784_03105 PF03129 Anticodon binding domain H2784_03105 PF04073 Aminoacyl-tRNA editing domain H2784_03105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H2784_03110 PF00873 AcrB/AcrD/AcrF family H2784_03125 PF00072 Response regulator receiver domain H2784_03130 PF00072 Response regulator receiver domain H2784_03135 PF01584 CheW-like domain H2784_03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H2784_03140 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term H2784_03145 PF01584 CheW-like domain H2784_03145 PF01627 Hpt domain H2784_03145 PF00072 Response regulator receiver domain H2784_03145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_03155 PF07687 Peptidase dimerisation domain H2784_03155 PF01546 Peptidase family M20/M25/M40 H2784_03160 PF08085 Entericidin EcnA/B family H2784_03170 PF04304 Protein of unknown function (DUF454) H2784_03175 PF17969 L,D-transpeptidase C-terminal domain H2784_03175 PF03734 L,D-transpeptidase catalytic domain H2784_03215 PF00667 FAD binding domain H2784_03215 PF00175 Oxidoreductase NAD-binding domain H2784_03215 PF00258 Flavodoxin H2784_03225 PF12805 FUSC-like inner membrane protein yccS H2784_03230 PF07690 Major Facilitator Superfamily H2784_03235 PF00881 Nitroreductase family H2784_03250 PF01235 Sodium:alanine symporter family H2784_03255 PF01734 Patatin-like phospholipase H2784_03260 PF13291 ACT domain H2784_03260 PF00291 Pyridoxal-phosphate dependent enzyme H2784_03265 PF05992 SbmA/BacA-like family H2784_03290 PF02934 GatB/GatE catalytic domain H2784_03290 PF02637 GatB domain H2784_03295 PF01425 Amidase H2784_03300 PF02686 Glu-tRNAGln amidotransferase C subunit H2784_03310 PF04085 rod shape-determining protein MreC H2784_03315 PF04093 rod shape-determining protein MreD H2784_03320 PF02545 Maf-like protein H2784_03325 PF10150 Ribonuclease E/G family H2784_03325 PF00575 S1 RNA binding domain H2784_03335 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain H2784_03335 PF06974 Protein of unknown function (DUF1298) H2784_03340 PF01507 Phosphoadenosine phosphosulfate reductase family H2784_03355 PF02525 Flavodoxin-like fold H2784_03375 PF02673 Bacitracin resistance protein BacA H2784_03380 PF06719 AraC-type transcriptional regulator N-terminus H2784_03380 PF12833 Helix-turn-helix domain H2784_03385 PF08240 Alcohol dehydrogenase GroES-like domain H2784_03385 PF00107 Zinc-binding dehydrogenase H2784_03390 PF01965 DJ-1/PfpI family H2784_03425 PF00324 Amino acid permease H2784_03430 PF04303 PrpF protein H2784_03435 PF00348 Polyprenyl synthetase H2784_03440 PF04237 YjbR H2784_03445 PF01145 SPFH domain / Band 7 family H2784_03455 PF01734 Patatin-like phospholipase H2784_03475 PF00884 Sulfatase H2784_03475 PF08019 Phosphoethanolamine transferase EptA/EptB H2784_03480 PF00486 Transcriptional regulatory protein, C terminal H2784_03480 PF00072 Response regulator receiver domain H2784_03485 PF00512 His Kinase A (phospho-acceptor) domain H2784_03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_03485 PF08521 Two-component sensor kinase N-terminal H2784_03495 PF00909 Ammonium Transporter Family H2784_03500 PF03466 LysR substrate binding domain H2784_03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_03520 PF10458 Valyl tRNA synthetase tRNA binding arm H2784_03520 PF08264 Anticodon-binding domain of tRNA H2784_03520 PF00133 tRNA synthetases class I (I, L, M and V) H2784_03540 PF01906 Putative heavy-metal-binding H2784_03545 PF01906 Putative heavy-metal-binding H2784_03550 PF02321 Outer membrane efflux protein H2784_03555 PF00873 AcrB/AcrD/AcrF family H2784_03560 PF00529 HlyD membrane-fusion protein of T1SS H2784_03560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2784_03565 PF01569 PAP2 superfamily H2784_03575 PF00348 Polyprenyl synthetase H2784_03585 PF00829 Ribosomal prokaryotic L21 protein H2784_03590 PF01016 Ribosomal L27 protein H2784_03595 PF03548 Outer membrane lipoprotein carrier protein LolA H2784_03605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H2784_03605 PF02403 Seryl-tRNA synthetase N-terminal domain H2784_03610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H2784_03610 PF14824 Sirohaem biosynthesis protein central H2784_03610 PF10414 Sirohaem synthase dimerisation region H2784_03615 PF00588 SpoU rRNA Methylase family H2784_03625 PF03358 NADPH-dependent FMN reductase H2784_03630 PF13520 Amino acid permease H2784_03635 PF00465 Iron-containing alcohol dehydrogenase H2784_03645 PF03099 Biotin/lipoate A/B protein ligase family H2784_03650 PF04359 Protein of unknown function (DUF493) H2784_03655 PF04546 Sigma-70, non-essential region H2784_03655 PF03979 Sigma-70 factor, region 1.1 H2784_03655 PF00140 Sigma-70 factor, region 1.2 H2784_03655 PF04542 Sigma-70 region 2 H2784_03655 PF04539 Sigma-70 region 3 H2784_03655 PF04545 Sigma-70, region 4 H2784_03675 PF00581 Rhodanese-like domain H2784_03675 PF17773 UPF0176 acylphosphatase like domain H2784_03685 PF00285 Citrate synthase, C-terminal domain H2784_03690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H2784_03695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H2784_03700 PF02910 Fumarate reductase flavoprotein C-term H2784_03700 PF00890 FAD binding domain H2784_03705 PF13085 2Fe-2S iron-sulfur cluster binding domain H2784_03720 PF16078 2-oxoglutarate dehydrogenase N-terminus H2784_03720 PF00676 Dehydrogenase E1 component H2784_03720 PF02779 Transketolase, pyrimidine binding domain H2784_03720 PF16870 2-oxoglutarate dehydrogenase C-terminal H2784_03725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H2784_03725 PF00364 Biotin-requiring enzyme H2784_03725 PF02817 e3 binding domain H2784_03730 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_03730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H2784_03735 PF08442 ATP-grasp domain H2784_03735 PF00549 CoA-ligase H2784_03740 PF02629 CoA binding domain H2784_03740 PF00549 CoA-ligase H2784_03745 PF00579 tRNA synthetases class I (W and Y) H2784_03750 PF05661 Protein of unknown function (DUF808) H2784_03755 PF04228 Putative neutral zinc metallopeptidase H2784_03760 PF00999 Sodium/hydrogen exchanger family H2784_03775 PF09587 Bacterial capsule synthesis protein PGA_cap H2784_03785 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H2784_03790 PF00582 Universal stress protein family H2784_03795 PF00132 Bacterial transferase hexapeptide (six repeats) H2784_03800 PF03449 Transcription elongation factor, N-terminal H2784_03800 PF01272 Transcription elongation factor, GreA/GreB, C-term H2784_03805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H2784_03805 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H2784_03805 PF02142 MGS-like domain H2784_03810 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H2784_03810 PF00117 Glutamine amidotransferase class-I H2784_03825 PF01985 CRS1 / YhbY (CRM) domain H2784_03830 PF01728 FtsJ-like methyltransferase H2784_03835 PF00004 ATPase family associated with various cellular activities (AAA) H2784_03835 PF17862 AAA+ lid domain H2784_03835 PF06480 FtsH Extracellular H2784_03835 PF01434 Peptidase family M41 H2784_03840 PF00809 Pterin binding enzyme H2784_03860 PF09423 PhoD-like phosphatase H2784_03860 PF16655 PhoD-like phosphatase, N-terminal domain H2784_03875 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H2784_03875 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H2784_03890 PF00083 Sugar (and other) transporter H2784_03895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H2784_03895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H2784_03900 PF01266 FAD dependent oxidoreductase H2784_03900 PF16901 C-terminal domain of alpha-glycerophosphate oxidase H2784_03905 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain H2784_03905 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain H2784_03910 PF00781 Diacylglycerol kinase catalytic domain H2784_03915 PF00149 Calcineurin-like phosphoesterase H2784_03925 PF00166 Chaperonin 10 Kd subunit H2784_03930 PF00118 TCP-1/cpn60 chaperonin family H2784_03935 PF01219 Prokaryotic diacylglycerol kinase H2784_03940 PF00753 Metallo-beta-lactamase superfamily H2784_03945 PF03009 Glycerophosphoryl diester phosphodiesterase family H2784_03950 PF00873 AcrB/AcrD/AcrF family H2784_03960 PF01435 Peptidase family M48 H2784_03965 PF01464 Transglycosylase SLT domain H2784_03970 PF01171 PP-loop family H2784_03980 PF00497 Bacterial extracellular solute-binding proteins, family 3 H2784_03980 PF01464 Transglycosylase SLT domain H2784_03985 PF01272 Transcription elongation factor, GreA/GreB, C-term H2784_03985 PF03449 Transcription elongation factor, N-terminal H2784_04000 PF00975 Thioesterase domain H2784_04000 PF00501 AMP-binding enzyme H2784_04000 PF00550 Phosphopantetheine attachment site H2784_04000 PF13193 AMP-binding enzyme C-terminal domain H2784_04000 PF00668 Condensation domain H2784_04010 PF09857 Putative toxin of bacterial toxin-antitoxin pair H2784_04050 PF00881 Nitroreductase family H2784_04065 PF02595 Glycerate kinase family H2784_04070 PF00384 Molybdopterin oxidoreductase H2784_04075 PF02634 FdhD/NarQ family H2784_04080 PF06803 Protein of unknown function (DUF1232) H2784_04085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H2784_04085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H2784_04085 PF11890 Domain of unknown function (DUF3410) H2784_04090 PF00152 tRNA synthetases class II (D, K and N) H2784_04100 PF18073 Rubredoxin metal binding domain H2784_04105 PF00324 Amino acid permease H2784_04115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H2784_04115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H2784_04120 PF01678 Diaminopimelate epimerase H2784_04125 PF01810 LysE type translocator H2784_04130 PF02899 Phage integrase, N-terminal SAM-like domain H2784_04130 PF00589 Phage integrase family H2784_04135 PF01012 Electron transfer flavoprotein domain H2784_04140 PF00766 Electron transfer flavoprotein FAD-binding domain H2784_04140 PF01012 Electron transfer flavoprotein domain H2784_04145 PF00521 DNA gyrase/topoisomerase IV, subunit A H2784_04145 PF03989 DNA gyrase C-terminal domain, beta-propeller H2784_04160 PF00535 Glycosyl transferase family 2 H2784_04180 PF13533 Biotin-lipoyl like H2784_04190 PF00266 Aminotransferase class-V H2784_04205 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H2784_04215 PF02687 FtsX-like permease family H2784_04215 PF12704 MacB-like periplasmic core domain H2784_04220 PF00005 ABC transporter H2784_04225 PF00753 Metallo-beta-lactamase superfamily H2784_04225 PF13567 Domain of unknown function (DUF4131) H2784_04225 PF03772 Competence protein H2784_04235 PF06965 Na+/H+ antiporter 1 H2784_04235 PF01343 Peptidase family S49 H2784_04240 PF12697 Alpha/beta hydrolase family H2784_04245 PF00551 Formyl transferase H2784_04250 PF00586 AIR synthase related protein, N-terminal domain H2784_04250 PF02769 AIR synthase related protein, C-terminal domain H2784_04255 PF01594 AI-2E family transporter H2784_04260 PF00308 Bacterial dnaA protein H2784_04260 PF08299 Bacterial dnaA protein helix-turn-helix H2784_04260 PF11638 DnaA N-terminal domain H2784_04290 PF00588 SpoU rRNA Methylase family H2784_04290 PF08032 RNA 2'-O ribose methyltransferase substrate binding H2784_04295 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H2784_04305 PF00691 OmpA family H2784_04310 PF07676 WD40-like Beta Propeller Repeat H2784_04310 PF04052 TolB amino-terminal domain H2784_04320 PF02472 Biopolymer transport protein ExbD/TolR H2784_04325 PF01618 MotA/TolQ/ExbB proton channel family H2784_04330 PF03061 Thioesterase superfamily H2784_04335 PF01546 Peptidase family M20/M25/M40 H2784_04335 PF07687 Peptidase dimerisation domain H2784_04340 PF05491 RuvB C-terminal winged helix domain H2784_04340 PF17864 RuvB AAA lid domain H2784_04340 PF05496 Holliday junction DNA helicase RuvB P-loop domain H2784_04345 PF01330 RuvA N terminal domain H2784_04345 PF07499 RuvA, C-terminal domain H2784_04350 PF01966 HD domain H2784_04355 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H2784_04355 PF02769 AIR synthase related protein, C-terminal domain H2784_04355 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H2784_04360 PF07690 Major Facilitator Superfamily H2784_04365 PF01784 NIF3 (NGG1p interacting factor 3) H2784_04370 PF00378 Enoyl-CoA hydratase/isomerase H2784_04375 PF00293 NUDIX domain H2784_04375 PF01467 Cytidylyltransferase-like H2784_04385 PF00578 AhpC/TSA family H2784_04400 PF06508 Queuosine biosynthesis protein QueC H2784_04410 PF00132 Bacterial transferase hexapeptide (six repeats) H2784_04410 PF14602 Hexapeptide repeat of succinyl-transferase H2784_04410 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal H2784_04420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_04420 PF03466 LysR substrate binding domain H2784_04425 PF00005 ABC transporter H2784_04425 PF12857 TOBE-like domain H2784_04430 PF00528 Binding-protein-dependent transport system inner membrane component H2784_04435 PF00528 Binding-protein-dependent transport system inner membrane component H2784_04450 PF01063 Amino-transferase class IV H2784_04455 PF02618 YceG-like family H2784_04460 PF02223 Thymidylate kinase H2784_04470 PF00890 FAD binding domain H2784_04470 PF02910 Fumarate reductase flavoprotein C-term H2784_04475 PF13180 PDZ domain H2784_04485 PF00679 Elongation factor G C-terminus H2784_04485 PF00009 Elongation factor Tu GTP binding domain H2784_04485 PF03144 Elongation factor Tu domain 2 H2784_04485 PF06421 GTP-binding protein LepA C-terminus H2784_04490 PF10502 Signal peptidase, peptidase S26 H2784_04500 PF00035 Double-stranded RNA binding motif H2784_04500 PF14622 Ribonuclease-III-like H2784_04505 PF07650 KH domain H2784_04505 PF01926 50S ribosome-binding GTPase H2784_04515 PF02565 Recombination protein O C terminal H2784_04515 PF11967 Recombination protein O N terminal H2784_04520 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H2784_04525 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) H2784_04530 PF00106 short chain dehydrogenase H2784_04560 PF00012 Hsp70 protein H2784_04570 PF00155 Aminotransferase class I and II H2784_04580 PF17151 Periplasmic sensor domain H2784_04580 PF00990 Diguanylate cyclase, GGDEF domain H2784_04590 PF00271 Helicase conserved C-terminal domain H2784_04590 PF04851 Type III restriction enzyme, res subunit H2784_04590 PF02151 UvrB/uvrC motif H2784_04590 PF12344 Ultra-violet resistance protein B H2784_04590 PF17757 UvrB interaction domain H2784_04600 PF00892 EamA-like transporter family H2784_04605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H2784_04605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H2784_04620 PF01018 GTP1/OBG H2784_04620 PF01926 50S ribosome-binding GTPase H2784_04625 PF01472 PUA domain H2784_04625 PF00696 Amino acid kinase family H2784_04635 PF07759 Protein of unknown function (DUF1615) H2784_04640 PF01207 Dihydrouridine synthase (Dus) H2784_04645 PF03060 Nitronate monooxygenase H2784_04660 PF02350 UDP-N-acetylglucosamine 2-epimerase H2784_04690 PF00875 DNA photolyase H2784_04690 PF03441 FAD binding domain of DNA photolyase H2784_04695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H2784_04700 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_04705 PF07943 Penicillin-binding protein 5, C-terminal domain H2784_04705 PF00768 D-alanyl-D-alanine carboxypeptidase H2784_04715 PF03971 Monomeric isocitrate dehydrogenase H2784_04720 PF00849 RNA pseudouridylate synthase H2784_04725 PF00180 Isocitrate/isopropylmalate dehydrogenase H2784_04745 PF06779 Uncharacterised MFS-type transporter YbfB H2784_04750 PF03466 LysR substrate binding domain H2784_04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_04755 PF00375 Sodium:dicarboxylate symporter family H2784_04760 PF02567 Phenazine biosynthesis-like protein H2784_04765 PF05193 Peptidase M16 inactive domain H2784_04765 PF00675 Insulinase (Peptidase family M16) H2784_04790 PF02581 Thiamine monophosphate synthase H2784_04795 PF00202 Aminotransferase class-III H2784_04805 PF00849 RNA pseudouridylate synthase H2784_04810 PF00176 SNF2 family N-terminal domain H2784_04810 PF18339 RapA N-terminal Tudor like domain 1 H2784_04810 PF18337 RapA N-terminal Tudor like domain H2784_04810 PF12137 RNA polymerase recycling family C-terminal H2784_04810 PF00271 Helicase conserved C-terminal domain H2784_04820 PF00440 Bacterial regulatory proteins, tetR family H2784_04825 PF00175 Oxidoreductase NAD-binding domain H2784_04825 PF00970 Oxidoreductase FAD-binding domain H2784_04825 PF00111 2Fe-2S iron-sulfur cluster binding domain H2784_04830 PF00487 Fatty acid desaturase H2784_04840 PF17754 MftR C-terminal domain H2784_04840 PF00440 Bacterial regulatory proteins, tetR family H2784_04850 PF00202 Aminotransferase class-III H2784_04855 PF00282 Pyridoxal-dependent decarboxylase conserved domain H2784_04860 PF00171 Aldehyde dehydrogenase family H2784_04865 PF01037 Lrp/AsnC ligand binding domain H2784_04870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H2784_04870 PF00205 Thiamine pyrophosphate enzyme, central domain H2784_04870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H2784_04875 PF00324 Amino acid permease H2784_04880 PF12849 PBP superfamily domain H2784_04885 PF00528 Binding-protein-dependent transport system inner membrane component H2784_04890 PF00528 Binding-protein-dependent transport system inner membrane component H2784_04895 PF00005 ABC transporter H2784_04900 PF01343 Peptidase family S49 H2784_04900 PF08496 Peptidase family S49 N-terminal H2784_04915 PF08328 Adenylosuccinate lyase C-terminal H2784_04915 PF00206 Lyase H2784_04920 PF04356 Protein of unknown function (DUF489) H2784_04930 PF13344 Haloacid dehalogenase-like hydrolase H2784_04930 PF00293 NUDIX domain H2784_04935 PF00132 Bacterial transferase hexapeptide (six repeats) H2784_04940 PF07943 Penicillin-binding protein 5, C-terminal domain H2784_04940 PF00768 D-alanyl-D-alanine carboxypeptidase H2784_04955 PF01975 Survival protein SurE H2784_04960 PF01551 Peptidase family M23 H2784_04960 PF01476 LysM domain H2784_04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_04965 PF03466 LysR substrate binding domain H2784_04970 PF13654 AAA domain H2784_04970 PF05362 Lon protease (S16) C-terminal proteolytic domain H2784_04975 PF07690 Major Facilitator Superfamily H2784_04980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H2784_04985 PF13593 SBF-like CPA transporter family (DUF4137) H2784_04990 PF01197 Ribosomal protein L31 H2784_04995 PF12792 CSS motif domain associated with EAL H2784_04995 PF00563 EAL domain H2784_05005 PF04055 Radical SAM superfamily H2784_05010 PF01132 Elongation factor P (EF-P) OB domain H2784_05010 PF08207 Elongation factor P (EF-P) KOW-like domain H2784_05010 PF09285 Elongation factor P, C-terminal H2784_05015 PF02554 Carbon starvation protein CstA H2784_05015 PF13722 5TM C-terminal transporter carbon starvation CstA H2784_05020 PF04328 Selenoprotein, putative H2784_05060 PF00857 Isochorismatase family H2784_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_05065 PF03466 LysR substrate binding domain H2784_05075 PF00743 Flavin-binding monooxygenase-like H2784_05080 PF00561 alpha/beta hydrolase fold H2784_05090 PF01370 NAD dependent epimerase/dehydratase family H2784_05095 PF12833 Helix-turn-helix domain H2784_05095 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H2784_05105 PF04966 Carbohydrate-selective porin, OprB family H2784_05110 PF07690 Major Facilitator Superfamily H2784_05120 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase H2784_05130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_05130 PF03466 LysR substrate binding domain H2784_05135 PF02585 GlcNAc-PI de-N-acetylase H2784_05140 PF03737 Aldolase/RraA H2784_05145 PF04303 PrpF protein H2784_05150 PF07859 alpha/beta hydrolase fold H2784_05170 PF02678 Pirin H2784_05170 PF17954 Quercetinase C-terminal cupin domain H2784_05175 PF00291 Pyridoxal-phosphate dependent enzyme H2784_05180 PF13309 HTH domain H2784_05180 PF08348 YheO-like PAS domain H2784_05190 PF00550 Phosphopantetheine attachment site H2784_05190 PF13193 AMP-binding enzyme C-terminal domain H2784_05190 PF00668 Condensation domain H2784_05190 PF00501 AMP-binding enzyme H2784_05195 PF00501 AMP-binding enzyme H2784_05195 PF00668 Condensation domain H2784_05195 PF13193 AMP-binding enzyme C-terminal domain H2784_05195 PF00975 Thioesterase domain H2784_05195 PF00550 Phosphopantetheine attachment site H2784_05200 PF01032 FecCD transport family H2784_05205 PF01032 FecCD transport family H2784_05210 PF00005 ABC transporter H2784_05215 PF01497 Periplasmic binding protein H2784_05220 PF00593 TonB dependent receptor H2784_05220 PF07715 TonB-dependent Receptor Plug Domain H2784_05225 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) H2784_05230 PF00501 AMP-binding enzyme H2784_05230 PF00668 Condensation domain H2784_05230 PF00550 Phosphopantetheine attachment site H2784_05235 PF00501 AMP-binding enzyme H2784_05235 PF13193 AMP-binding enzyme C-terminal domain H2784_05240 PF00857 Isochorismatase family H2784_05240 PF00550 Phosphopantetheine attachment site H2784_05245 PF00282 Pyridoxal-dependent decarboxylase conserved domain H2784_05250 PF00005 ABC transporter H2784_05255 PF00005 ABC transporter H2784_05260 PF00975 Thioesterase domain H2784_05270 PF00425 chorismate binding enzyme H2784_05280 PF01208 Uroporphyrinogen decarboxylase (URO-D) H2784_05285 PF05675 Protein of unknown function (DUF817) H2784_05300 PF00144 Beta-lactamase H2784_05305 PF01227 GTP cyclohydrolase I H2784_05310 PF00111 2Fe-2S iron-sulfur cluster binding domain H2784_05310 PF01799 [2Fe-2S] binding domain H2784_05315 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain H2784_05315 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase H2784_05330 PF00218 Indole-3-glycerol phosphate synthase H2784_05335 PF02885 Glycosyl transferase family, helical bundle domain H2784_05335 PF00591 Glycosyl transferase family, a/b domain H2784_05340 PF07715 TonB-dependent Receptor Plug Domain H2784_05340 PF00593 TonB dependent receptor H2784_05345 PF01433 Peptidase family M1 domain H2784_05345 PF11838 ERAP1-like C-terminal domain H2784_05350 PF00117 Glutamine amidotransferase class-I H2784_05360 PF00854 POT family H2784_05365 PF00120 Glutamine synthetase, catalytic domain H2784_05365 PF03951 Glutamine synthetase, beta-Grasp domain H2784_05370 PF04345 Chorismate lyase H2784_05375 PF01040 UbiA prenyltransferase family H2784_05410 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H2784_05410 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H2784_05415 PF01784 NIF3 (NGG1p interacting factor 3) H2784_05420 PF13180 PDZ domain H2784_05425 PF01743 Poly A polymerase head domain H2784_05425 PF12627 Probable RNA and SrmB- binding site of polymerase A H2784_05430 PF00390 Malic enzyme, N-terminal domain H2784_05430 PF03949 Malic enzyme, NAD binding domain H2784_05430 PF01515 Phosphate acetyl/butaryl transferase H2784_05435 PF00990 Diguanylate cyclase, GGDEF domain H2784_05435 PF03707 Bacterial signalling protein N terminal repeat H2784_05435 PF00563 EAL domain H2784_05440 PF04452 RNA methyltransferase H2784_05445 PF02219 Methylenetetrahydrofolate reductase H2784_05450 PF05221 S-adenosyl-L-homocysteine hydrolase H2784_05450 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain H2784_05465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_05465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_05465 PF09317 Domain of unknown function (DUF1974) H2784_05470 PF04055 Radical SAM superfamily H2784_05475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H2784_05475 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_05485 PF07690 Major Facilitator Superfamily H2784_05495 PF00557 Metallopeptidase family M24 H2784_05500 PF00318 Ribosomal protein S2 H2784_05505 PF00889 Elongation factor TS H2784_05515 PF12833 Helix-turn-helix domain H2784_05535 PF03330 Lytic transglycolase H2784_05535 PF05036 Sporulation related domain H2784_05540 PF13406 Transglycosylase SLT domain H2784_05545 PF01098 Cell cycle protein H2784_05555 PF14489 QueF-like protein H2784_05555 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H2784_05560 PF01061 ABC-2 type transporter H2784_05565 PF00005 ABC transporter H2784_05595 PF00464 Serine hydroxymethyltransferase H2784_05600 PF02321 Outer membrane efflux protein H2784_05605 PF00873 AcrB/AcrD/AcrF family H2784_05610 PF13533 Biotin-lipoyl like H2784_05615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_05615 PF03466 LysR substrate binding domain H2784_05620 PF00497 Bacterial extracellular solute-binding proteins, family 3 H2784_05625 PF00528 Binding-protein-dependent transport system inner membrane component H2784_05630 PF00528 Binding-protein-dependent transport system inner membrane component H2784_05635 PF00005 ABC transporter H2784_05640 PF00893 Small Multidrug Resistance protein H2784_05645 PF12838 4Fe-4S dicluster domain H2784_05650 PF01136 Peptidase family U32 H2784_05650 PF16325 Peptidase family U32 C-terminal domain H2784_05655 PF00155 Aminotransferase class I and II H2784_05655 PF00392 Bacterial regulatory proteins, gntR family H2784_05660 PF02567 Phenazine biosynthesis-like protein H2784_05665 PF00175 Oxidoreductase NAD-binding domain H2784_05665 PF00970 Oxidoreductase FAD-binding domain H2784_05670 PF01980 tRNA-methyltransferase O H2784_05670 PF18389 TrmO C-terminal domain H2784_05680 PF00437 Type II/IV secretion system protein H2784_05680 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H2784_05690 PF00486 Transcriptional regulatory protein, C terminal H2784_05690 PF00072 Response regulator receiver domain H2784_05695 PF00512 His Kinase A (phospho-acceptor) domain H2784_05695 PF08521 Two-component sensor kinase N-terminal H2784_05695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_05705 PF00293 NUDIX domain H2784_05715 PF00905 Penicillin binding protein transpeptidase domain H2784_05715 PF14814 Bifunctional transglycosylase second domain H2784_05715 PF00912 Transglycosylase H2784_05720 PF01513 ATP-NAD kinase H2784_05725 PF07023 Protein of unknown function (DUF1315) H2784_05730 PF00591 Glycosyl transferase family, a/b domain H2784_05730 PF02885 Glycosyl transferase family, helical bundle domain H2784_05735 PF00375 Sodium:dicarboxylate symporter family H2784_05740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_05740 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_05740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_05745 PF00756 Putative esterase H2784_05750 PF01842 ACT domain H2784_05750 PF00800 Prephenate dehydratase H2784_05750 PF01817 Chorismate mutase type II H2784_05755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H2784_05765 PF01546 Peptidase family M20/M25/M40 H2784_05765 PF07687 Peptidase dimerisation domain H2784_05770 PF00753 Metallo-beta-lactamase superfamily H2784_05780 PF03883 Peroxide stress protein YaaA H2784_05790 PF05690 Thiazole biosynthesis protein ThiG H2784_05800 PF04241 Protein of unknown function (DUF423) H2784_05805 PF00140 Sigma-70 factor, region 1.2 H2784_05805 PF04542 Sigma-70 region 2 H2784_05805 PF04545 Sigma-70, region 4 H2784_05815 PF00313 'Cold-shock' DNA-binding domain H2784_05820 PF00271 Helicase conserved C-terminal domain H2784_05820 PF00270 DEAD/DEAH box helicase H2784_05830 PF00881 Nitroreductase family H2784_05835 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H2784_05835 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H2784_05855 PF01180 Dihydroorotate dehydrogenase H2784_05860 PF02674 Colicin V production protein H2784_05865 PF00156 Phosphoribosyl transferase domain H2784_05880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H2784_05880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H2784_05885 PF01435 Peptidase family M48 H2784_05890 PF09424 Yqey-like protein H2784_05895 PF01165 Ribosomal protein S21 H2784_05900 PF00814 Glycoprotease family H2784_05920 PF03793 PASTA domain H2784_05920 PF00069 Protein kinase domain H2784_05945 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB H2784_05945 PF17287 POTRA domain H2784_05945 PF08479 POTRA domain, ShlB-type H2784_05985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_05985 PF03466 LysR substrate binding domain H2784_05990 PF00202 Aminotransferase class-III H2784_05995 PF00171 Aldehyde dehydrogenase family H2784_06000 PF00324 Amino acid permease H2784_06030 PF04076 Bacterial OB fold (BOF) protein H2784_06055 PF00561 alpha/beta hydrolase fold H2784_06060 PF03616 Sodium/glutamate symporter H2784_06070 PF00392 Bacterial regulatory proteins, gntR family H2784_06070 PF07729 FCD domain H2784_06120 PF00083 Sugar (and other) transporter H2784_06120 PF08946 Osmosensory transporter coiled coil H2784_06145 PF04403 Paraquat-inducible protein A H2784_06150 PF02470 MlaD protein H2784_06160 PF01177 Asp/Glu/Hydantoin racemase H2784_06165 PF00892 EamA-like transporter family H2784_06170 PF07995 Glucose / Sorbosone dehydrogenase H2784_06190 PF00375 Sodium:dicarboxylate symporter family H2784_06200 PF00753 Metallo-beta-lactamase superfamily H2784_06200 PF16123 Hydroxyacylglutathione hydrolase C-terminus H2784_06205 PF00528 Binding-protein-dependent transport system inner membrane component H2784_06210 PF00005 ABC transporter H2784_06210 PF09383 NIL domain H2784_06215 PF03180 NLPA lipoprotein H2784_06220 PF02843 Phosphoribosylglycinamide synthetase, C domain H2784_06220 PF02844 Phosphoribosylglycinamide synthetase, N domain H2784_06220 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H2784_06225 PF01808 AICARFT/IMPCHase bienzyme H2784_06225 PF02142 MGS-like domain H2784_06230 PF02954 Bacterial regulatory protein, Fis family H2784_06250 PF01134 Glucose inhibited division protein A H2784_06250 PF13932 GidA associated domain H2784_06260 PF14403 Circularly permuted ATP-grasp type 2 H2784_06270 PF08379 Bacterial transglutaminase-like N-terminal region H2784_06270 PF01841 Transglutaminase-like superfamily H2784_06280 PF00842 Alanine racemase, C-terminal domain H2784_06280 PF01168 Alanine racemase, N-terminal domain H2784_06285 PF00772 DnaB-like helicase N terminal domain H2784_06285 PF03796 DnaB-like helicase C terminal domain H2784_06290 PF03948 Ribosomal protein L9, C-terminal domain H2784_06290 PF01281 Ribosomal protein L9, N-terminal domain H2784_06295 PF01084 Ribosomal protein S18 H2784_06300 PF01250 Ribosomal protein S6 H2784_06305 PF01040 UbiA prenyltransferase family H2784_06310 PF03626 Prokaryotic Cytochrome C oxidase subunit IV H2784_06315 PF00510 Cytochrome c oxidase subunit III H2784_06320 PF00115 Cytochrome C and Quinol oxidase polypeptide I H2784_06325 PF06481 COX Aromatic Rich Motif H2784_06325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H2784_06335 PF00391 PEP-utilising enzyme, mobile domain H2784_06335 PF02896 PEP-utilising enzyme, TIM barrel domain H2784_06335 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H2784_06340 PF03618 Kinase/pyrophosphorylase H2784_06350 PF14883 Hypothetical glycosyl hydrolase family 13 H2784_06350 PF01522 Polysaccharide deacetylase H2784_06355 PF00535 Glycosyl transferase family 2 H2784_06360 PF13994 PgaD-like protein H2784_06370 PF00296 Luciferase-like monooxygenase H2784_06385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_06385 PF03466 LysR substrate binding domain H2784_06395 PF03462 PCRF domain H2784_06395 PF00472 RF-1 domain H2784_06400 PF17827 PrmC N-terminal domain H2784_06400 PF13847 Methyltransferase domain H2784_06405 PF12833 Helix-turn-helix domain H2784_06410 PF00106 short chain dehydrogenase H2784_06415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_06415 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_06415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_06420 PF00501 AMP-binding enzyme H2784_06420 PF13193 AMP-binding enzyme C-terminal domain H2784_06425 PF01613 Flavin reductase like domain H2784_06430 PF00899 ThiF family H2784_06435 PF03109 ABC1 family H2784_06450 PF03814 Potassium-transporting ATPase A subunit H2784_06460 PF02669 K+-transporting ATPase, c chain H2784_06465 PF13493 Domain of unknown function (DUF4118) H2784_06465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_06465 PF00512 His Kinase A (phospho-acceptor) domain H2784_06465 PF02702 Osmosensitive K+ channel His kinase sensor domain H2784_06470 PF00486 Transcriptional regulatory protein, C terminal H2784_06470 PF00072 Response regulator receiver domain H2784_06475 PF00120 Glutamine synthetase, catalytic domain H2784_06485 PF03232 Ubiquinone biosynthesis protein COQ7 H2784_06490 PF07690 Major Facilitator Superfamily H2784_06495 PF07244 Surface antigen variable number repeat H2784_06495 PF17243 POTRA domain TamA domain 1 H2784_06495 PF01103 Surface antigen H2784_06510 PF00330 Aconitase family (aconitate hydratase) H2784_06510 PF06434 Aconitate hydratase 2 N-terminus H2784_06510 PF11791 Aconitate B N-terminal domain H2784_06520 PF00027 Cyclic nucleotide-binding domain H2784_06520 PF00520 Ion transport protein H2784_06525 PF07690 Major Facilitator Superfamily H2784_06540 PF03466 LysR substrate binding domain H2784_06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_06545 PF04284 Protein of unknown function (DUF441) H2784_06555 PF01479 S4 domain H2784_06555 PF00849 RNA pseudouridylate synthase H2784_06570 PF00849 RNA pseudouridylate synthase H2784_06570 PF01479 S4 domain H2784_06575 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H2784_06580 PF08676 MutL C terminal dimerisation domain H2784_06580 PF01119 DNA mismatch repair protein, C-terminal domain H2784_06590 PF17209 Hfq protein H2784_06600 PF00881 Nitroreductase family H2784_06610 PF00149 Calcineurin-like phosphoesterase H2784_06615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H2784_06620 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H2784_06620 PF00749 tRNA synthetases class I (E and Q), catalytic domain H2784_06625 PF00117 Glutamine amidotransferase class-I H2784_06625 PF02540 NAD synthase H2784_06625 PF00958 GMP synthase C terminal domain H2784_06630 PF05985 Ethanolamine ammonia-lyase light chain (EutC) H2784_06635 PF06751 Ethanolamine ammonia lyase large subunit (EutB) H2784_06640 PF13520 Amino acid permease H2784_06645 PF00171 Aldehyde dehydrogenase family H2784_06660 PF00465 Iron-containing alcohol dehydrogenase H2784_06665 PF14493 Helix-turn-helix domain H2784_06665 PF05970 PIF1-like helicase H2784_06675 PF06445 GyrI-like small molecule binding domain H2784_06680 PF02110 Hydroxyethylthiazole kinase family H2784_06695 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H2784_06695 PF11940 Domain of unknown function (DUF3458) Ig-like fold H2784_06695 PF01433 Peptidase family M1 domain H2784_06710 PF13954 PapC N-terminal domain H2784_06710 PF13953 PapC C-terminal domain H2784_06710 PF00577 Outer membrane usher protein H2784_06735 PF01817 Chorismate mutase type II H2784_06740 PF01037 Lrp/AsnC ligand binding domain H2784_06750 PF00440 Bacterial regulatory proteins, tetR family H2784_06760 PF00924 Mechanosensitive ion channel H2784_06790 PF07715 TonB-dependent Receptor Plug Domain H2784_06790 PF00593 TonB dependent receptor H2784_06810 PF00005 ABC transporter H2784_06810 PF12848 ABC transporter H2784_06815 PF00582 Universal stress protein family H2784_06840 PF00690 Cation transporter/ATPase, N-terminus H2784_06840 PF00689 Cation transporting ATPase, C-terminus H2784_06845 PF02308 MgtC family H2784_06850 PF03594 Benzoate membrane transport protein H2784_06855 PF01037 Lrp/AsnC ligand binding domain H2784_06860 PF01810 LysE type translocator H2784_06865 PF13202 EF hand H2784_06865 PF00923 Transaldolase/Fructose-6-phosphate aldolase H2784_06870 PF03466 LysR substrate binding domain H2784_06870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_06880 PF02803 Thiolase, C-terminal domain H2784_06880 PF00108 Thiolase, N-terminal domain H2784_06890 PF01575 MaoC like domain H2784_06895 PF00144 Beta-lactamase H2784_06905 PF07690 Major Facilitator Superfamily H2784_06910 PF12170 DNA polymerase III tau subunit V interacting with alpha H2784_06910 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H2784_06910 PF12169 DNA polymerase III subunits gamma and tau domain III H2784_06920 PF05506 Domain of unknown function (DUF756) H2784_06920 PF04185 Phosphoesterase family H2784_06925 PF03061 Thioesterase superfamily H2784_06930 PF00465 Iron-containing alcohol dehydrogenase H2784_06940 PF01451 Low molecular weight phosphotyrosine protein phosphatase H2784_06945 PF01565 FAD binding domain H2784_06945 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H2784_06960 PF01645 Conserved region in glutamate synthase H2784_06980 PF12832 MFS_1 like family H2784_06990 PF02785 Biotin carboxylase C-terminal domain H2784_06990 PF00289 Biotin carboxylase, N-terminal domain H2784_06990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H2784_06995 PF00364 Biotin-requiring enzyme H2784_07000 PF01220 Dehydroquinase class II H2784_07005 PF00817 impB/mucB/samB family H2784_07005 PF13438 Domain of unknown function (DUF4113) H2784_07005 PF11799 impB/mucB/samB family C-terminal domain H2784_07015 PF00005 ABC transporter H2784_07020 PF00072 Response regulator receiver domain H2784_07020 PF00486 Transcriptional regulatory protein, C terminal H2784_07030 PF18267 Rubredoxin NAD+ reductase C-terminal domain H2784_07030 PF04324 BFD-like [2Fe-2S] binding domain H2784_07030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H2784_07030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H2784_07030 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_07030 PF13806 Rieske-like [2Fe-2S] domain H2784_07035 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_07035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H2784_07035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H2784_07035 PF04324 BFD-like [2Fe-2S] binding domain H2784_07035 PF18267 Rubredoxin NAD+ reductase C-terminal domain H2784_07040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H2784_07040 PF01568 Molydopterin dinucleotide binding domain H2784_07040 PF04324 BFD-like [2Fe-2S] binding domain H2784_07040 PF00384 Molybdopterin oxidoreductase H2784_07045 PF12804 MobA-like NTP transferase domain H2784_07050 PF01568 Molydopterin dinucleotide binding domain H2784_07050 PF00384 Molybdopterin oxidoreductase H2784_07050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H2784_07055 PF04055 Radical SAM superfamily H2784_07055 PF06463 Molybdenum Cofactor Synthesis C H2784_07065 PF02391 MoaE protein H2784_07070 PF00994 Probable molybdopterin binding domain H2784_07070 PF01967 MoaC family H2784_07075 PF03453 MoeA N-terminal region (domain I and II) H2784_07075 PF00994 Probable molybdopterin binding domain H2784_07075 PF03454 MoeA C-terminal region (domain IV) H2784_07080 PF01638 HxlR-like helix-turn-helix H2784_07085 PF00155 Aminotransferase class I and II H2784_07085 PF00392 Bacterial regulatory proteins, gntR family H2784_07090 PF00892 EamA-like transporter family H2784_07110 PF02635 DsrE/DsrF-like family H2784_07115 PF16363 GDP-mannose 4,6 dehydratase H2784_07120 PF00206 Lyase H2784_07120 PF10415 Fumarase C C-terminus H2784_07140 PF01266 FAD dependent oxidoreductase H2784_07150 PF02542 YgbB family H2784_07160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H2784_07160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H2784_07165 PF00440 Bacterial regulatory proteins, tetR family H2784_07170 PF02954 Bacterial regulatory protein, Fis family H2784_07170 PF00158 Sigma-54 interaction domain H2784_07170 PF00072 Response regulator receiver domain H2784_07175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_07175 PF00989 PAS fold H2784_07175 PF00512 His Kinase A (phospho-acceptor) domain H2784_07180 PF00919 Uncharacterized protein family UPF0004 H2784_07180 PF04055 Radical SAM superfamily H2784_07180 PF18693 TRAM domain H2784_07185 PF00696 Amino acid kinase family H2784_07190 PF01765 Ribosome recycling factor H2784_07195 PF01255 Putative undecaprenyl diphosphate synthase H2784_07205 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H2784_07205 PF13288 DXP reductoisomerase C-terminal domain H2784_07205 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H2784_07210 PF13180 PDZ domain H2784_07210 PF17820 PDZ domain H2784_07210 PF02163 Peptidase family M50 H2784_07215 PF07244 Surface antigen variable number repeat H2784_07215 PF01103 Surface antigen H2784_07225 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H2784_07225 PF00132 Bacterial transferase hexapeptide (six repeats) H2784_07230 PF07977 FabA-like domain H2784_07235 PF00132 Bacterial transferase hexapeptide (six repeats) H2784_07235 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H2784_07250 PF02631 RecX family H2784_07255 PF00154 recA bacterial DNA recombination protein H2784_07260 PF01479 S4 domain H2784_07265 PF13419 Haloacid dehalogenase-like hydrolase H2784_07290 PF01037 Lrp/AsnC ligand binding domain H2784_07295 PF00266 Aminotransferase class-V H2784_07300 PF00324 Amino acid permease H2784_07310 PF05922 Peptidase inhibitor I9 H2784_07310 PF00082 Subtilase family H2784_07315 PF01740 STAS domain H2784_07315 PF00916 Sulfate permease family H2784_07320 PF02586 SOS response associated peptidase (SRAP) H2784_07325 PF07995 Glucose / Sorbosone dehydrogenase H2784_07335 PF00563 EAL domain H2784_07335 PF03707 Bacterial signalling protein N terminal repeat H2784_07335 PF00990 Diguanylate cyclase, GGDEF domain H2784_07350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H2784_07350 PF02378 Phosphotransferase system, EIIC H2784_07355 PF00294 pfkB family carbohydrate kinase H2784_07360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H2784_07360 PF00381 PTS HPr component phosphorylation site H2784_07360 PF02896 PEP-utilising enzyme, TIM barrel domain H2784_07360 PF00391 PEP-utilising enzyme, mobile domain H2784_07360 PF05524 PEP-utilising enzyme, N-terminal H2784_07385 PF05525 Branched-chain amino acid transport protein H2784_07390 PF00557 Metallopeptidase family M24 H2784_07395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_07395 PF03466 LysR substrate binding domain H2784_07405 PF00462 Glutaredoxin H2784_07410 PF00202 Aminotransferase class-III H2784_07415 PF00478 IMP dehydrogenase / GMP reductase domain H2784_07415 PF00571 CBS domain H2784_07440 PF00448 SRP54-type protein, GTPase domain H2784_07440 PF02881 SRP54-type protein, helical bundle domain H2784_07450 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H2784_07460 PF08173 Membrane bound YbgT-like protein H2784_07465 PF02322 Cytochrome bd terminal oxidase subunit II H2784_07470 PF01654 Cytochrome bd terminal oxidase subunit I H2784_07480 PF07290 Protein of unknown function (DUF1449) H2784_07490 PF00294 pfkB family carbohydrate kinase H2784_07495 PF00593 TonB dependent receptor H2784_07495 PF07715 TonB-dependent Receptor Plug Domain H2784_07500 PF05193 Peptidase M16 inactive domain H2784_07500 PF00675 Insulinase (Peptidase family M16) H2784_07500 PF08367 Peptidase M16C associated H2784_07505 PF02253 Phospholipase A1 H2784_07510 PF02386 Cation transport protein H2784_07515 PF02080 TrkA-C domain H2784_07515 PF02254 TrkA-N domain H2784_07520 PF00291 Pyridoxal-phosphate dependent enzyme H2784_07520 PF00585 C-terminal regulatory domain of Threonine dehydratase H2784_07525 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H2784_07540 PF01118 Semialdehyde dehydrogenase, NAD binding domain H2784_07540 PF02774 Semialdehyde dehydrogenase, dimerisation domain H2784_07550 PF02617 ATP-dependent Clp protease adaptor protein ClpS H2784_07555 PF02861 Clp amino terminal domain, pathogenicity island component H2784_07555 PF17871 AAA lid domain H2784_07555 PF00004 ATPase family associated with various cellular activities (AAA) H2784_07555 PF07724 AAA domain (Cdc48 subfamily) H2784_07555 PF10431 C-terminal, D2-small domain, of ClpB protein H2784_07560 PF02694 Uncharacterised BCR, YnfA/UPF0060 family H2784_07565 PF00793 DAHP synthetase I family H2784_07580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H2784_07580 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_07610 PF00117 Glutamine amidotransferase class-I H2784_07610 PF06418 CTP synthase N-terminus H2784_07615 PF00793 DAHP synthetase I family H2784_07620 PF03952 Enolase, N-terminal domain H2784_07620 PF00113 Enolase, C-terminal TIM barrel domain H2784_07625 PF04239 Protein of unknown function (DUF421) H2784_07630 PF04977 Septum formation initiator H2784_07635 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H2784_07640 PF01144 Coenzyme A transferase H2784_07645 PF01144 Coenzyme A transferase H2784_07650 PF00108 Thiolase, N-terminal domain H2784_07650 PF02803 Thiolase, C-terminal domain H2784_07655 PF00206 Lyase H2784_07655 PF10397 Adenylosuccinate lyase C-terminus H2784_07660 PF00561 alpha/beta hydrolase fold H2784_07665 PF07690 Major Facilitator Superfamily H2784_07670 PF02627 Carboxymuconolactone decarboxylase family H2784_07675 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal H2784_07675 PF00775 Dioxygenase H2784_07680 PF00775 Dioxygenase H2784_07685 PF01487 Type I 3-dehydroquinase H2784_07690 PF05048 Periplasmic copper-binding protein (NosD) H2784_07695 PF04966 Carbohydrate-selective porin, OprB family H2784_07700 PF13360 PQQ-like domain H2784_07700 PF01011 PQQ enzyme repeat H2784_07710 PF04143 Sulphur transport H2784_07720 PF00753 Metallo-beta-lactamase superfamily H2784_07725 PF01614 Bacterial transcriptional regulator H2784_07725 PF09339 IclR helix-turn-helix domain H2784_07730 PF03466 LysR substrate binding domain H2784_07730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_07735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_07735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_07735 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_07750 PF00106 short chain dehydrogenase H2784_07760 PF07690 Major Facilitator Superfamily H2784_07770 PF01425 Amidase H2784_07775 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H2784_07790 PF00355 Rieske [2Fe-2S] domain H2784_07790 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H2784_07805 PF00175 Oxidoreductase NAD-binding domain H2784_07805 PF00111 2Fe-2S iron-sulfur cluster binding domain H2784_07810 PF01613 Flavin reductase like domain H2784_07815 PF12833 Helix-turn-helix domain H2784_07815 PF02311 AraC-like ligand binding domain H2784_07820 PF02728 Copper amine oxidase, N3 domain H2784_07820 PF02727 Copper amine oxidase, N2 domain H2784_07820 PF07833 Copper amine oxidase N-terminal domain H2784_07820 PF01179 Copper amine oxidase, enzyme domain H2784_07830 PF00171 Aldehyde dehydrogenase family H2784_07835 PF01804 Penicillin amidase H2784_07840 PF12146 Serine aminopeptidase, S33 H2784_07845 PF02803 Thiolase, C-terminal domain H2784_07845 PF00108 Thiolase, N-terminal domain H2784_07850 PF01144 Coenzyme A transferase H2784_07855 PF01144 Coenzyme A transferase H2784_07860 PF04444 Catechol dioxygenase N terminus H2784_07860 PF00775 Dioxygenase H2784_07865 PF02426 Muconolactone delta-isomerase H2784_07870 PF13378 Enolase C-terminal domain-like H2784_07870 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H2784_07875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_07875 PF03466 LysR substrate binding domain H2784_07885 PF00392 Bacterial regulatory proteins, gntR family H2784_07885 PF07729 FCD domain H2784_07890 PF00920 Dehydratase family H2784_07895 PF07690 Major Facilitator Superfamily H2784_07905 PF00171 Aldehyde dehydrogenase family H2784_07915 PF00561 alpha/beta hydrolase fold H2784_07920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H2784_07920 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_07935 PF09278 MerR, DNA binding H2784_07935 PF00376 MerR family regulatory protein H2784_07945 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_07955 PF12706 Beta-lactamase superfamily domain H2784_07960 PF08359 YsiA-like protein, C-terminal region H2784_07960 PF00440 Bacterial regulatory proteins, tetR family H2784_07970 PF00857 Isochorismatase family H2784_07975 PF03466 LysR substrate binding domain H2784_07975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_07980 PF07995 Glucose / Sorbosone dehydrogenase H2784_07985 PF00999 Sodium/hydrogen exchanger family H2784_07985 PF02254 TrkA-N domain H2784_08020 PF07690 Major Facilitator Superfamily H2784_08025 PF04909 Amidohydrolase H2784_08035 PF07702 UTRA domain H2784_08035 PF00392 Bacterial regulatory proteins, gntR family H2784_08040 PF08450 SMP-30/Gluconolactonase/LRE-like region H2784_08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_08050 PF03466 LysR substrate binding domain H2784_08075 PF00529 HlyD membrane-fusion protein of T1SS H2784_08075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2784_08090 PF00171 Aldehyde dehydrogenase family H2784_08095 PF00920 Dehydratase family H2784_08105 PF03466 LysR substrate binding domain H2784_08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_08110 PF01370 NAD dependent epimerase/dehydratase family H2784_08115 PF07690 Major Facilitator Superfamily H2784_08120 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H2784_08120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H2784_08125 PF06719 AraC-type transcriptional regulator N-terminus H2784_08125 PF12833 Helix-turn-helix domain H2784_08140 PF08240 Alcohol dehydrogenase GroES-like domain H2784_08140 PF00107 Zinc-binding dehydrogenase H2784_08150 PF01032 FecCD transport family H2784_08155 PF00005 ABC transporter H2784_08175 PF14572 Phosphoribosyl synthetase-associated domain H2784_08175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H2784_08180 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H2784_08195 PF13533 Biotin-lipoyl like H2784_08200 PF07690 Major Facilitator Superfamily H2784_08225 PF01975 Survival protein SurE H2784_08235 PF02824 TGS domain H2784_08235 PF04607 Region found in RelA / SpoT proteins H2784_08235 PF13291 ACT domain H2784_08295 PF12146 Serine aminopeptidase, S33 H2784_08300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_08300 PF03466 LysR substrate binding domain H2784_08305 PF01266 FAD dependent oxidoreductase H2784_08330 PF02321 Outer membrane efflux protein H2784_08335 PF00873 AcrB/AcrD/AcrF family H2784_08340 PF00529 HlyD membrane-fusion protein of T1SS H2784_08340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2784_08345 PF00486 Transcriptional regulatory protein, C terminal H2784_08345 PF00072 Response regulator receiver domain H2784_08350 PF00672 HAMP domain H2784_08350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_08350 PF00512 His Kinase A (phospho-acceptor) domain H2784_08355 PF05721 Phytanoyl-CoA dioxygenase (PhyH) H2784_08370 PF05721 Phytanoyl-CoA dioxygenase (PhyH) H2784_08375 PF12146 Serine aminopeptidase, S33 H2784_08380 PF00743 Flavin-binding monooxygenase-like H2784_08385 PF01063 Amino-transferase class IV H2784_08405 PF08240 Alcohol dehydrogenase GroES-like domain H2784_08405 PF00107 Zinc-binding dehydrogenase H2784_08410 PF00171 Aldehyde dehydrogenase family H2784_08420 PF00501 AMP-binding enzyme H2784_08420 PF13193 AMP-binding enzyme C-terminal domain H2784_08425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_08425 PF03466 LysR substrate binding domain H2784_08450 PF00106 short chain dehydrogenase H2784_08455 PF01575 MaoC like domain H2784_08460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_08460 PF12806 Acetyl-CoA dehydrogenase C-terminal like H2784_08460 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_08460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_08465 PF02803 Thiolase, C-terminal domain H2784_08465 PF00108 Thiolase, N-terminal domain H2784_08475 PF00083 Sugar (and other) transporter H2784_08480 PF01042 Endoribonuclease L-PSP H2784_08490 PF12806 Acetyl-CoA dehydrogenase C-terminal like H2784_08490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_08490 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_08490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_08495 PF01636 Phosphotransferase enzyme family H2784_08510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_08510 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_08510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_08520 PF06506 Propionate catabolism activator H2784_08520 PF00158 Sigma-54 interaction domain H2784_08520 PF02954 Bacterial regulatory protein, Fis family H2784_08525 PF13193 AMP-binding enzyme C-terminal domain H2784_08525 PF00501 AMP-binding enzyme H2784_08535 PF00474 Sodium:solute symporter family H2784_08630 PF16970 Type-1 fimbrial protein, A H2784_08635 PF02753 Pili assembly chaperone PapD, C-terminal domain H2784_08635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain H2784_08640 PF13953 PapC C-terminal domain H2784_08640 PF00577 Outer membrane usher protein H2784_08640 PF13954 PapC N-terminal domain H2784_08655 PF08240 Alcohol dehydrogenase GroES-like domain H2784_08655 PF00107 Zinc-binding dehydrogenase H2784_08665 PF00199 Catalase H2784_08680 PF13091 PLD-like domain H2784_08700 PF01244 Membrane dipeptidase (Peptidase family M19) H2784_08705 PF04055 Radical SAM superfamily H2784_08705 PF13186 Iron-sulfur cluster-binding domain H2784_08710 PF05402 Coenzyme PQQ synthesis protein D (PqqD) H2784_08715 PF03070 TENA/THI-4/PQQC family H2784_08720 PF12706 Beta-lactamase superfamily domain H2784_08725 PF08042 PqqA family H2784_08730 PF02503 Polyphosphate kinase middle domain H2784_08730 PF13089 Polyphosphate kinase N-terminal domain H2784_08730 PF17941 Polyphosphate kinase C-terminal domain 1 H2784_08730 PF13090 Polyphosphate kinase C-terminal domain 2 H2784_08735 PF00149 Calcineurin-like phosphoesterase H2784_08745 PF00857 Isochorismatase family H2784_08745 PF00550 Phosphopantetheine attachment site H2784_08750 PF00106 short chain dehydrogenase H2784_08755 PF03459 TOBE domain H2784_08755 PF00005 ABC transporter H2784_08760 PF00528 Binding-protein-dependent transport system inner membrane component H2784_08770 PF03459 TOBE domain H2784_08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_08775 PF00355 Rieske [2Fe-2S] domain H2784_08775 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H2784_08780 PF00866 Ring hydroxylating beta subunit H2784_08785 PF00970 Oxidoreductase FAD-binding domain H2784_08785 PF00111 2Fe-2S iron-sulfur cluster binding domain H2784_08785 PF00175 Oxidoreductase NAD-binding domain H2784_08800 PF01613 Flavin reductase like domain H2784_08815 PF01738 Dienelactone hydrolase family H2784_08820 PF07690 Major Facilitator Superfamily H2784_08825 PF12833 Helix-turn-helix domain H2784_08825 PF06719 AraC-type transcriptional regulator N-terminus H2784_08845 PF00440 Bacterial regulatory proteins, tetR family H2784_08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_08865 PF03466 LysR substrate binding domain H2784_08870 PF01144 Coenzyme A transferase H2784_08875 PF01144 Coenzyme A transferase H2784_08880 PF02667 Short chain fatty acid transporter H2784_08885 PF00108 Thiolase, N-terminal domain H2784_08885 PF02803 Thiolase, C-terminal domain H2784_08890 PF03466 LysR substrate binding domain H2784_08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_08895 PF03466 LysR substrate binding domain H2784_08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_08910 PF10415 Fumarase C C-terminus H2784_08910 PF00206 Lyase H2784_08915 PF07715 TonB-dependent Receptor Plug Domain H2784_08915 PF00593 TonB dependent receptor H2784_08920 PF00083 Sugar (and other) transporter H2784_08935 PF00005 ABC transporter H2784_08940 PF00528 Binding-protein-dependent transport system inner membrane component H2784_08945 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H2784_08960 PF07702 UTRA domain H2784_08960 PF00392 Bacterial regulatory proteins, gntR family H2784_08965 PF02417 Chromate transporter H2784_08970 PF02525 Flavodoxin-like fold H2784_08975 PF01638 HxlR-like helix-turn-helix H2784_08980 PF12833 Helix-turn-helix domain H2784_08980 PF06445 GyrI-like small molecule binding domain H2784_08995 PF01925 Sulfite exporter TauE/SafE H2784_09000 PF04273 Putative phosphatase (DUF442) H2784_09000 PF00753 Metallo-beta-lactamase superfamily H2784_09005 PF04273 Putative phosphatase (DUF442) H2784_09005 PF00753 Metallo-beta-lactamase superfamily H2784_09010 PF02954 Bacterial regulatory protein, Fis family H2784_09010 PF00072 Response regulator receiver domain H2784_09010 PF00158 Sigma-54 interaction domain H2784_09015 PF01062 Bestrophin, RFP-TM, chloride channel H2784_09020 PF08240 Alcohol dehydrogenase GroES-like domain H2784_09020 PF00107 Zinc-binding dehydrogenase H2784_09025 PF00106 short chain dehydrogenase H2784_09030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H2784_09030 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_09035 PF02817 e3 binding domain H2784_09035 PF00364 Biotin-requiring enzyme H2784_09035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H2784_09040 PF02779 Transketolase, pyrimidine binding domain H2784_09040 PF02780 Transketolase, C-terminal domain H2784_09045 PF00676 Dehydrogenase E1 component H2784_09050 PF04055 Radical SAM superfamily H2784_09065 PF08448 PAS fold H2784_09065 PF00990 Diguanylate cyclase, GGDEF domain H2784_09070 PF01264 Chorismate synthase H2784_09075 PF05175 Methyltransferase small domain H2784_09080 PF00291 Pyridoxal-phosphate dependent enzyme H2784_09090 PF17862 AAA+ lid domain H2784_09090 PF01434 Peptidase family M41 H2784_09090 PF00004 ATPase family associated with various cellular activities (AAA) H2784_09100 PF05166 YcgL domain H2784_09120 PF00570 HRDC domain H2784_09120 PF01612 3'-5' exonuclease H2784_09125 PF02132 RecR protein H2784_09125 PF13662 Toprim domain H2784_09130 PF02575 YbaB/EbfC DNA-binding family H2784_09140 PF01053 Cys/Met metabolism PLP-dependent enzyme H2784_09145 PF00561 alpha/beta hydrolase fold H2784_09150 PF08241 Methyltransferase domain H2784_09180 PF01230 HIT domain H2784_09215 PF00005 ABC transporter H2784_09220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2784_09230 PF02684 Lipid-A-disaccharide synthetase H2784_09235 PF00593 TonB dependent receptor H2784_09235 PF07715 TonB-dependent Receptor Plug Domain H2784_09255 PF01925 Sulfite exporter TauE/SafE H2784_09260 PF00793 DAHP synthetase I family H2784_09265 PF02654 Cobalamin-5-phosphate synthase H2784_09280 PF02277 Phosphoribosyltransferase H2784_09285 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase H2784_09295 PF13419 Haloacid dehalogenase-like hydrolase H2784_09320 PF07715 TonB-dependent Receptor Plug Domain H2784_09320 PF00593 TonB dependent receptor H2784_09325 PF03737 Aldolase/RraA H2784_09335 PF06276 Ferric iron reductase FhuF-like transporter H2784_09335 PF04183 IucA / IucC family H2784_09340 PF06276 Ferric iron reductase FhuF-like transporter H2784_09340 PF04183 IucA / IucC family H2784_09345 PF07690 Major Facilitator Superfamily H2784_09350 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) H2784_09355 PF06276 Ferric iron reductase FhuF-like transporter H2784_09355 PF04183 IucA / IucC family H2784_09360 PF04073 Aminoacyl-tRNA editing domain H2784_09370 PF03109 ABC1 family H2784_09375 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_09375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_09375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_09380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_09380 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_09380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_09385 PF00487 Fatty acid desaturase H2784_09390 PF12852 Cupin H2784_09390 PF12833 Helix-turn-helix domain H2784_09395 PF00639 PPIC-type PPIASE domain H2784_09395 PF09312 SurA N-terminal domain H2784_09400 PF00216 Bacterial DNA-binding protein H2784_09415 PF02082 Transcriptional regulator H2784_09420 PF00266 Aminotransferase class-V H2784_09425 PF01592 NifU-like N terminal domain H2784_09430 PF01521 Iron-sulphur cluster biosynthesis H2784_09435 PF00226 DnaJ domain H2784_09435 PF07743 HSCB C-terminal oligomerisation domain H2784_09440 PF00012 Hsp70 protein H2784_09445 PF00111 2Fe-2S iron-sulfur cluster binding domain H2784_09450 PF00211 Adenylate and Guanylate cyclase catalytic domain H2784_09460 PF03461 TRCF domain H2784_09460 PF17757 UvrB interaction domain H2784_09460 PF02559 CarD-like/TRCF domain H2784_09460 PF00271 Helicase conserved C-terminal domain H2784_09460 PF00270 DEAD/DEAH box helicase H2784_09480 PF03737 Aldolase/RraA H2784_09485 PF13460 NAD(P)H-binding H2784_09490 PF01649 Ribosomal protein S20 H2784_09500 PF00459 Inositol monophosphatase family H2784_09515 PF00005 ABC transporter H2784_09515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H2784_09520 PF00528 Binding-protein-dependent transport system inner membrane component H2784_09525 PF00528 Binding-protein-dependent transport system inner membrane component H2784_09530 PF01432 Peptidase family M3 H2784_09545 PF07715 TonB-dependent Receptor Plug Domain H2784_09545 PF00593 TonB dependent receptor H2784_09555 PF01618 MotA/TolQ/ExbB proton channel family H2784_09560 PF02472 Biopolymer transport protein ExbD/TolR H2784_09565 PF02472 Biopolymer transport protein ExbD/TolR H2784_09575 PF01274 Malate synthase H2784_09580 PF03969 AFG1-like ATPase H2784_09590 PF00743 Flavin-binding monooxygenase-like H2784_09600 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H2784_09610 PF00216 Bacterial DNA-binding protein H2784_09615 PF00575 S1 RNA binding domain H2784_09620 PF02224 Cytidylate kinase H2784_09630 PF14437 MafB19-like deaminase H2784_09640 PF03167 Uracil DNA glycosylase superfamily H2784_09650 PF03934 Type II secretion system (T2SS), protein K H2784_09655 PF11612 Type II secretion system (T2SS), protein J H2784_09655 PF07963 Prokaryotic N-terminal methylation motif H2784_09660 PF02501 Type II secretion system (T2SS), protein I H2784_09660 PF07963 Prokaryotic N-terminal methylation motif H2784_09675 PF01026 TatD related DNase H2784_09685 PF09115 DNA polymerase III, delta subunit, C terminal H2784_09690 PF02348 Cytidylyltransferase H2784_09695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H2784_09700 PF00005 ABC transporter H2784_09700 PF00664 ABC transporter transmembrane region H2784_09710 PF01618 MotA/TolQ/ExbB proton channel family H2784_09715 PF02195 ParB-like nuclease domain H2784_09715 PF17762 HTH domain found in ParB protein H2784_09720 PF13614 AAA domain H2784_09725 PF02527 rRNA small subunit methyltransferase G H2784_09730 PF00483 Nucleotidyl transferase H2784_09735 PF01636 Phosphotransferase enzyme family H2784_09740 PF03968 OstA-like protein H2784_09740 PF04453 LPS transport system D H2784_09745 PF00639 PPIC-type PPIASE domain H2784_09745 PF09312 SurA N-terminal domain H2784_09750 PF01116 Fructose-bisphosphate aldolase class-II H2784_09760 PF00162 Phosphoglycerate kinase H2784_09770 PF02545 Maf-like protein H2784_09775 PF08007 Cupin superfamily protein H2784_09790 PF00375 Sodium:dicarboxylate symporter family H2784_09795 PF06912 Protein of unknown function (DUF1275) H2784_09800 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) H2784_09805 PF00005 ABC transporter H2784_09805 PF00664 ABC transporter transmembrane region H2784_09815 PF12833 Helix-turn-helix domain H2784_09815 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H2784_09820 PF01597 Glycine cleavage H-protein H2784_09825 PF02146 Sir2 family H2784_09830 PF00474 Sodium:solute symporter family H2784_09835 PF01037 Lrp/AsnC ligand binding domain H2784_09840 PF14850 DNA-binding domain of Proline dehydrogenase H2784_09840 PF00171 Aldehyde dehydrogenase family H2784_09840 PF01619 Proline dehydrogenase H2784_09840 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H2784_09845 PF04229 GrpB protein H2784_09850 PF05958 tRNA (Uracil-5-)-methyltransferase H2784_09860 PF09992 Phosphodiester glycosidase H2784_09870 PF04264 YceI-like domain H2784_09880 PF00456 Transketolase, thiamine diphosphate binding domain H2784_09880 PF02780 Transketolase, C-terminal domain H2784_09880 PF02779 Transketolase, pyrimidine binding domain H2784_09885 PF02773 S-adenosylmethionine synthetase, C-terminal domain H2784_09885 PF00438 S-adenosylmethionine synthetase, N-terminal domain H2784_09885 PF02772 S-adenosylmethionine synthetase, central domain H2784_09905 PF00905 Penicillin binding protein transpeptidase domain H2784_09920 PF02075 Crossover junction endodeoxyribonuclease RuvC H2784_09925 PF03853 YjeF-related protein N-terminus H2784_09925 PF01256 Carbohydrate kinase H2784_09930 PF08331 Domain of unknown function (DUF1730) H2784_09935 PF06968 Biotin and Thiamin Synthesis associated domain H2784_09935 PF04055 Radical SAM superfamily H2784_09950 PF16970 Type-1 fimbrial protein, A H2784_09955 PF02753 Pili assembly chaperone PapD, C-terminal domain H2784_09955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain H2784_09960 PF13954 PapC N-terminal domain H2784_09960 PF00577 Outer membrane usher protein H2784_09960 PF13953 PapC C-terminal domain H2784_09970 PF12833 Helix-turn-helix domain H2784_09970 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H2784_09985 PF00892 EamA-like transporter family H2784_09995 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H2784_10005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_10005 PF03466 LysR substrate binding domain H2784_10025 PF00440 Bacterial regulatory proteins, tetR family H2784_10035 PF01709 Transcriptional regulator H2784_10040 PF01037 Lrp/AsnC ligand binding domain H2784_10050 PF00005 ABC transporter H2784_10055 PF00528 Binding-protein-dependent transport system inner membrane component H2784_10060 PF00528 Binding-protein-dependent transport system inner membrane component H2784_10075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_10075 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H2784_10085 PF00296 Luciferase-like monooxygenase H2784_10090 PF03180 NLPA lipoprotein H2784_10095 PF03180 NLPA lipoprotein H2784_10100 PF00005 ABC transporter H2784_10100 PF09383 NIL domain H2784_10105 PF00528 Binding-protein-dependent transport system inner membrane component H2784_10110 PF01926 50S ribosome-binding GTPase H2784_10110 PF06071 Protein of unknown function (DUF933) H2784_10135 PF03591 AzlC protein H2784_10140 PF05437 Branched-chain amino acid transport protein (AzlD) H2784_10150 PF02222 ATP-grasp domain H2784_10155 PF08335 GlnD PII-uridylyltransferase H2784_10155 PF01966 HD domain H2784_10155 PF01909 Nucleotidyltransferase domain H2784_10160 PF00155 Aminotransferase class I and II H2784_10170 PF12852 Cupin H2784_10170 PF12833 Helix-turn-helix domain H2784_10175 PF00255 Glutathione peroxidase H2784_10180 PF01641 SelR domain H2784_10185 PF00155 Aminotransferase class I and II H2784_10190 PF00375 Sodium:dicarboxylate symporter family H2784_10195 PF17763 Glutaminase/Asparaginase C-terminal domain H2784_10195 PF00710 Asparaginase, N-terminal H2784_10200 PF07733 Bacterial DNA polymerase III alpha NTPase domain H2784_10200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H2784_10200 PF01336 OB-fold nucleic acid binding domain H2784_10200 PF02811 PHP domain H2784_10200 PF14579 Helix-hairpin-helix motif H2784_10205 PF00588 SpoU rRNA Methylase family H2784_10210 PF00132 Bacterial transferase hexapeptide (six repeats) H2784_10225 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_10225 PF13192 Thioredoxin domain H2784_10240 PF03466 LysR substrate binding domain H2784_10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_10245 PF01758 Sodium Bile acid symporter family H2784_10250 PF01022 Bacterial regulatory protein, arsR family H2784_10255 PF03960 ArsC family H2784_10265 PF01979 Amidohydrolase family H2784_10265 PF13382 Adenine deaminase C-terminal domain H2784_10275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_10275 PF03466 LysR substrate binding domain H2784_10285 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H2784_10290 PF01177 Asp/Glu/Hydantoin racemase H2784_10295 PF02668 Taurine catabolism dioxygenase TauD, TfdA family H2784_10300 PF00528 Binding-protein-dependent transport system inner membrane component H2784_10305 PF00005 ABC transporter H2784_10310 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H2784_10320 PF00083 Sugar (and other) transporter H2784_10325 PF00296 Luciferase-like monooxygenase H2784_10340 PF01654 Cytochrome bd terminal oxidase subunit I H2784_10345 PF02322 Cytochrome bd terminal oxidase subunit II H2784_10355 PF00392 Bacterial regulatory proteins, gntR family H2784_10355 PF00155 Aminotransferase class I and II H2784_10360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_10360 PF03466 LysR substrate binding domain H2784_10375 PF00698 Acyl transferase domain H2784_10380 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG H2784_10390 PF01039 Carboxyl transferase domain H2784_10395 PF06857 Malonate decarboxylase delta subunit (MdcD) H2784_10400 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase H2784_10405 PF16957 Malonate decarboxylase, alpha subunit, transporter H2784_10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_10410 PF03466 LysR substrate binding domain H2784_10420 PF07690 Major Facilitator Superfamily H2784_10435 PF00392 Bacterial regulatory proteins, gntR family H2784_10435 PF00155 Aminotransferase class I and II H2784_10440 PF04172 LrgB-like family H2784_10445 PF03788 LrgA family H2784_10450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_10450 PF03466 LysR substrate binding domain H2784_10455 PF14834 Glutathione S-transferase, C-terminal domain H2784_10455 PF02798 Glutathione S-transferase, N-terminal domain H2784_10460 PF02798 Glutathione S-transferase, N-terminal domain H2784_10465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_10465 PF03466 LysR substrate binding domain H2784_10475 PF00581 Rhodanese-like domain H2784_10480 PF00132 Bacterial transferase hexapeptide (six repeats) H2784_10490 PF00266 Aminotransferase class-V H2784_10495 PF01810 LysE type translocator H2784_10500 PF03466 LysR substrate binding domain H2784_10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_10510 PF00497 Bacterial extracellular solute-binding proteins, family 3 H2784_10515 PF00497 Bacterial extracellular solute-binding proteins, family 3 H2784_10520 PF00005 ABC transporter H2784_10525 PF00528 Binding-protein-dependent transport system inner membrane component H2784_10530 PF00528 Binding-protein-dependent transport system inner membrane component H2784_10545 PF00072 Response regulator receiver domain H2784_10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_10550 PF00512 His Kinase A (phospho-acceptor) domain H2784_10550 PF09308 LuxQ, periplasmic H2784_10550 PF00072 Response regulator receiver domain H2784_10560 PF01037 Lrp/AsnC ligand binding domain H2784_10560 PF13404 AsnC-type helix-turn-helix domain H2784_10570 PF00717 Peptidase S24-like H2784_10595 PF06628 Catalase-related immune-responsive H2784_10595 PF00199 Catalase H2784_10595 PF18011 C-terminal domain found in long catalases H2784_10605 PF18146 Damage-inducible protein CinA KH domain H2784_10605 PF00994 Probable molybdopterin binding domain H2784_10605 PF02464 Competence-damaged protein H2784_10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_10640 PF03466 LysR substrate binding domain H2784_10660 PF00501 AMP-binding enzyme H2784_10660 PF13193 AMP-binding enzyme C-terminal domain H2784_10665 PF00440 Bacterial regulatory proteins, tetR family H2784_10670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_10670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_10670 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_10675 PF01039 Carboxyl transferase domain H2784_10680 PF00378 Enoyl-CoA hydratase/isomerase H2784_10685 PF00364 Biotin-requiring enzyme H2784_10685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H2784_10685 PF02785 Biotin carboxylase C-terminal domain H2784_10685 PF18140 Propionyl-coenzyme A carboxylase BT domain H2784_10685 PF00289 Biotin carboxylase, N-terminal domain H2784_10690 PF00682 HMGL-like H2784_10695 PF03466 LysR substrate binding domain H2784_10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_10710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_10710 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_10710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_10710 PF12806 Acetyl-CoA dehydrogenase C-terminal like H2784_10720 PF07690 Major Facilitator Superfamily H2784_10730 PF01144 Coenzyme A transferase H2784_10735 PF01144 Coenzyme A transferase H2784_10740 PF07690 Major Facilitator Superfamily H2784_10745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_10745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_10745 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_10750 PF00378 Enoyl-CoA hydratase/isomerase H2784_10760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H2784_10760 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain H2784_10760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H2784_10765 PF02803 Thiolase, C-terminal domain H2784_10765 PF00108 Thiolase, N-terminal domain H2784_10770 PF09339 IclR helix-turn-helix domain H2784_10775 PF07690 Major Facilitator Superfamily H2784_10780 PF03060 Nitronate monooxygenase H2784_10785 PF00378 Enoyl-CoA hydratase/isomerase H2784_10790 PF09339 IclR helix-turn-helix domain H2784_10795 PF02515 CoA-transferase family III H2784_10800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_10800 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_10800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_10805 PF07690 Major Facilitator Superfamily H2784_10810 PF13419 Haloacid dehalogenase-like hydrolase H2784_10815 PF00266 Aminotransferase class-V H2784_10815 PF13419 Haloacid dehalogenase-like hydrolase H2784_10820 PF01266 FAD dependent oxidoreductase H2784_10825 PF00528 Binding-protein-dependent transport system inner membrane component H2784_10830 PF00005 ABC transporter H2784_10830 PF08402 TOBE domain H2784_10840 PF00392 Bacterial regulatory proteins, gntR family H2784_10840 PF07702 UTRA domain H2784_10845 PF01494 FAD binding domain H2784_10850 PF09339 IclR helix-turn-helix domain H2784_10850 PF01614 Bacterial transcriptional regulator H2784_10855 PF02525 Flavodoxin-like fold H2784_10860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_10860 PF03466 LysR substrate binding domain H2784_10865 PF02627 Carboxymuconolactone decarboxylase family H2784_10870 PF00171 Aldehyde dehydrogenase family H2784_10880 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H2784_10890 PF00171 Aldehyde dehydrogenase family H2784_10895 PF00296 Luciferase-like monooxygenase H2784_10900 PF01613 Flavin reductase like domain H2784_10905 PF12697 Alpha/beta hydrolase family H2784_10925 PF01292 Prokaryotic cytochrome b561 H2784_10930 PF00199 Catalase H2784_10935 PF07690 Major Facilitator Superfamily H2784_10940 PF00682 HMGL-like H2784_10945 PF02515 CoA-transferase family III H2784_10960 PF06719 AraC-type transcriptional regulator N-terminus H2784_10960 PF12833 Helix-turn-helix domain H2784_10985 PF03061 Thioesterase superfamily H2784_10990 PF00132 Bacterial transferase hexapeptide (six repeats) H2784_10995 PF08223 PaaX-like protein C-terminal domain H2784_10995 PF07848 PaaX-like protein H2784_11000 PF14535 AMP-binding enzyme C-terminal domain H2784_11000 PF00501 AMP-binding enzyme H2784_11005 PF02803 Thiolase, C-terminal domain H2784_11005 PF00108 Thiolase, N-terminal domain H2784_11010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H2784_11010 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain H2784_11010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H2784_11015 PF00378 Enoyl-CoA hydratase/isomerase H2784_11020 PF00378 Enoyl-CoA hydratase/isomerase H2784_11025 PF00175 Oxidoreductase NAD-binding domain H2784_11025 PF00111 2Fe-2S iron-sulfur cluster binding domain H2784_11025 PF00970 Oxidoreductase FAD-binding domain H2784_11030 PF01883 Iron-sulfur cluster assembly protein H2784_11035 PF05138 Phenylacetic acid catabolic protein H2784_11040 PF06243 Phenylacetic acid degradation B H2784_11045 PF05138 Phenylacetic acid catabolic protein H2784_11050 PF01575 MaoC like domain H2784_11050 PF00171 Aldehyde dehydrogenase family H2784_11055 PF03313 Serine dehydratase alpha chain H2784_11055 PF03315 Serine dehydratase beta chain H2784_11060 PF13520 Amino acid permease H2784_11065 PF00171 Aldehyde dehydrogenase family H2784_11070 PF00083 Sugar (and other) transporter H2784_11080 PF04324 BFD-like [2Fe-2S] binding domain H2784_11080 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_11090 PF01266 FAD dependent oxidoreductase H2784_11095 PF05544 Proline racemase H2784_11100 PF00392 Bacterial regulatory proteins, gntR family H2784_11110 PF00701 Dihydrodipicolinate synthetase family H2784_11120 PF00376 MerR family regulatory protein H2784_11120 PF09278 MerR, DNA binding H2784_11130 PF02677 Epoxyqueuosine reductase QueH H2784_11145 PF07690 Major Facilitator Superfamily H2784_11150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H2784_11160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_11160 PF03466 LysR substrate binding domain H2784_11180 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H2784_11185 PF06812 ImpA, N-terminal, type VI secretion system H2784_11190 PF00004 ATPase family associated with various cellular activities (AAA) H2784_11190 PF07724 AAA domain (Cdc48 subfamily) H2784_11190 PF17871 AAA lid domain H2784_11190 PF10431 C-terminal, D2-small domain, of ClpB protein H2784_11200 PF00691 OmpA family H2784_11200 PF01389 OmpA-like transmembrane domain H2784_11210 PF14331 ImcF-related N-terminal domain H2784_11210 PF06761 Intracellular multiplication and human macrophage-killing H2784_11210 PF06744 Type VI secretion protein IcmF C-terminal H2784_11225 PF05947 Type VI secretion system, TssF H2784_11240 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H2784_11265 PF00005 ABC transporter H2784_11270 PF00497 Bacterial extracellular solute-binding proteins, family 3 H2784_11275 PF01425 Amidase H2784_11280 PF01402 Ribbon-helix-helix protein, copG family H2784_11280 PF08753 NikR C terminal nickel binding domain H2784_11290 PF01638 HxlR-like helix-turn-helix H2784_11295 PF02525 Flavodoxin-like fold H2784_11300 PF00289 Biotin carboxylase, N-terminal domain H2784_11300 PF02785 Biotin carboxylase C-terminal domain H2784_11300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H2784_11315 PF13823 Alcohol dehydrogenase GroES-associated H2784_11315 PF08240 Alcohol dehydrogenase GroES-like domain H2784_11315 PF00107 Zinc-binding dehydrogenase H2784_11340 PF13018 Extended Signal Peptide of Type V secretion system H2784_11340 PF13332 Hemagglutinin repeat H2784_11340 PF04829 Pre-toxin domain with VENN motif H2784_11340 PF05860 haemagglutination activity domain H2784_11345 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB H2784_11345 PF17287 POTRA domain H2784_11345 PF08479 POTRA domain, ShlB-type H2784_11350 PF00654 Voltage gated chloride channel H2784_11355 PF02785 Biotin carboxylase C-terminal domain H2784_11355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H2784_11355 PF00364 Biotin-requiring enzyme H2784_11355 PF00289 Biotin carboxylase, N-terminal domain H2784_11365 PF07286 Protein of unknown function (DUF1445) H2784_11370 PF03746 LamB/YcsF family H2784_11375 PF01566 Natural resistance-associated macrophage protein H2784_11380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_11380 PF03466 LysR substrate binding domain H2784_11395 PF13419 Haloacid dehalogenase-like hydrolase H2784_11415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H2784_11415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H2784_11435 PF07690 Major Facilitator Superfamily H2784_11445 PF03279 Bacterial lipid A biosynthesis acyltransferase H2784_11450 PF03707 Bacterial signalling protein N terminal repeat H2784_11450 PF00563 EAL domain H2784_11450 PF00990 Diguanylate cyclase, GGDEF domain H2784_11455 PF00892 EamA-like transporter family H2784_11460 PF01037 Lrp/AsnC ligand binding domain H2784_11465 PF01624 MutS domain I H2784_11465 PF05188 MutS domain II H2784_11465 PF05192 MutS domain III H2784_11465 PF05190 MutS family domain IV H2784_11465 PF00488 MutS domain V H2784_11475 PF11953 Domain of unknown function (DUF3470) H2784_11475 PF00037 4Fe-4S binding domain H2784_11485 PF01596 O-methyltransferase H2784_11495 PF00132 Bacterial transferase hexapeptide (six repeats) H2784_11500 PF01205 Uncharacterized protein family UPF0029 H2784_11510 PF00664 ABC transporter transmembrane region H2784_11510 PF00005 ABC transporter H2784_11510 PF03412 Peptidase C39 family H2784_11515 PF02321 Outer membrane efflux protein H2784_11520 PF00005 ABC transporter H2784_11520 PF12399 Branched-chain amino acid ATP-binding cassette transporter H2784_11525 PF03968 OstA-like protein H2784_11540 PF01380 SIS domain H2784_11540 PF00571 CBS domain H2784_11545 PF09190 DALR domain H2784_11545 PF01406 tRNA synthetases class I (C) catalytic domain H2784_11580 PF01638 HxlR-like helix-turn-helix H2784_11585 PF07690 Major Facilitator Superfamily H2784_11610 PF14748 Pyrroline-5-carboxylate reductase dimerisation H2784_11610 PF03807 NADP oxidoreductase coenzyme F420-dependent H2784_11620 PF00313 'Cold-shock' DNA-binding domain H2784_11625 PF01810 LysE type translocator H2784_11655 PF02601 Exonuclease VII, large subunit H2784_11655 PF13742 OB-fold nucleic acid binding domain H2784_11690 PF09278 MerR, DNA binding H2784_11690 PF00376 MerR family regulatory protein H2784_11695 PF00403 Heavy-metal-associated domain H2784_11700 PF00403 Heavy-metal-associated domain H2784_11705 PF03466 LysR substrate binding domain H2784_11705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_11710 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H2784_11710 PF00355 Rieske [2Fe-2S] domain H2784_11715 PF00866 Ring hydroxylating beta subunit H2784_11720 PF00970 Oxidoreductase FAD-binding domain H2784_11720 PF00111 2Fe-2S iron-sulfur cluster binding domain H2784_11720 PF00175 Oxidoreductase NAD-binding domain H2784_11725 PF00106 short chain dehydrogenase H2784_11730 PF03594 Benzoate membrane transport protein H2784_11735 PF07690 Major Facilitator Superfamily H2784_11745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H2784_11745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H2784_11750 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H2784_11750 PF00271 Helicase conserved C-terminal domain H2784_11750 PF04408 Helicase associated domain (HA2) H2784_11750 PF11898 Domain of unknown function (DUF3418) H2784_11750 PF00270 DEAD/DEAH box helicase H2784_11755 PF00578 AhpC/TSA family H2784_11755 PF10417 C-terminal domain of 1-Cys peroxiredoxin H2784_11775 PF13192 Thioredoxin domain H2784_11775 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_11785 PF00043 Glutathione S-transferase, C-terminal domain H2784_11785 PF02798 Glutathione S-transferase, N-terminal domain H2784_11795 PF02390 Putative methyltransferase H2784_11800 PF00043 Glutathione S-transferase, C-terminal domain H2784_11800 PF13417 Glutathione S-transferase, N-terminal domain H2784_11810 PF13488 Glycine zipper H2784_11810 PF00691 OmpA family H2784_11815 PF01979 Amidohydrolase family H2784_11820 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H2784_11820 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H2784_11830 PF10672 S-adenosylmethionine-dependent methyltransferase H2784_11830 PF02926 THUMP domain H2784_11830 PF01170 Putative RNA methylase family UPF0020 H2784_11840 PF02464 Competence-damaged protein H2784_11840 PF18146 Damage-inducible protein CinA KH domain H2784_11840 PF00994 Probable molybdopterin binding domain H2784_11845 PF02861 Clp amino terminal domain, pathogenicity island component H2784_11845 PF10431 C-terminal, D2-small domain, of ClpB protein H2784_11845 PF17871 AAA lid domain H2784_11845 PF07724 AAA domain (Cdc48 subfamily) H2784_11845 PF00004 ATPase family associated with various cellular activities (AAA) H2784_11860 PF02566 OsmC-like protein H2784_11865 PF13545 Crp-like helix-turn-helix domain H2784_11865 PF00027 Cyclic nucleotide-binding domain H2784_11870 PF00248 Aldo/keto reductase family H2784_11885 PF00709 Adenylosuccinate synthetase H2784_11890 PF13393 Histidyl-tRNA synthetase H2784_11900 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H2784_11900 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H2784_11905 PF02272 DHHA1 domain H2784_11905 PF01411 tRNA synthetases class II (A) H2784_11905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H2784_11910 PF13840 ACT domain H2784_11910 PF00696 Amino acid kinase family H2784_11910 PF01842 ACT domain H2784_11915 PF02599 Global regulator protein family H2784_11920 PF01351 Ribonuclease HII H2784_11930 PF01292 Prokaryotic cytochrome b561 H2784_11935 PF00962 Adenosine/AMP deaminase H2784_11940 PF00860 Permease family H2784_11950 PF00743 Flavin-binding monooxygenase-like H2784_11955 PF00106 short chain dehydrogenase H2784_11965 PF17954 Quercetinase C-terminal cupin domain H2784_11965 PF02678 Pirin H2784_11970 PF17932 Tetracyclin repressor-like, C-terminal domain H2784_11970 PF00440 Bacterial regulatory proteins, tetR family H2784_11980 PF00106 short chain dehydrogenase H2784_11985 PF00743 Flavin-binding monooxygenase-like H2784_11990 PF04072 Leucine carboxyl methyltransferase H2784_11995 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H2784_11995 PF12833 Helix-turn-helix domain H2784_12000 PF00743 Flavin-binding monooxygenase-like H2784_12005 PF00106 short chain dehydrogenase H2784_12010 PF07859 alpha/beta hydrolase fold H2784_12015 PF05199 GMC oxidoreductase H2784_12020 PF03573 outer membrane porin, OprD family H2784_12025 PF07690 Major Facilitator Superfamily H2784_12030 PF00884 Sulfatase H2784_12035 PF03781 Sulfatase-modifying factor enzyme 1 H2784_12045 PF00355 Rieske [2Fe-2S] domain H2784_12050 PF00111 2Fe-2S iron-sulfur cluster binding domain H2784_12050 PF00175 Oxidoreductase NAD-binding domain H2784_12065 PF07690 Major Facilitator Superfamily H2784_12070 PF00378 Enoyl-CoA hydratase/isomerase H2784_12075 PF00171 Aldehyde dehydrogenase family H2784_12085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_12085 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_12085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_12090 PF03573 outer membrane porin, OprD family H2784_12105 PF07519 Tannase and feruloyl esterase H2784_12110 PF00392 Bacterial regulatory proteins, gntR family H2784_12110 PF07729 FCD domain H2784_12115 PF00171 Aldehyde dehydrogenase family H2784_12120 PF00701 Dihydrodipicolinate synthetase family H2784_12125 PF13378 Enolase C-terminal domain-like H2784_12130 PF07690 Major Facilitator Superfamily H2784_12135 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus H2784_12135 PF08666 SAF domain H2784_12140 PF00892 EamA-like transporter family H2784_12145 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H2784_12145 PF12833 Helix-turn-helix domain H2784_12150 PF00171 Aldehyde dehydrogenase family H2784_12175 PF00324 Amino acid permease H2784_12180 PF04958 Arginine N-succinyltransferase beta subunit H2784_12185 PF00202 Aminotransferase class-III H2784_12195 PF00171 Aldehyde dehydrogenase family H2784_12205 PF07729 FCD domain H2784_12205 PF00392 Bacterial regulatory proteins, gntR family H2784_12215 PF00324 Amino acid permease H2784_12220 PF01266 FAD dependent oxidoreductase H2784_12225 PF00324 Amino acid permease H2784_12235 PF05643 Putative bacterial lipoprotein (DUF799) H2784_12245 PF03783 Curli production assembly/transport component CsgG H2784_12290 PF03180 NLPA lipoprotein H2784_12295 PF05987 Bacterial protein of unknown function (DUF898) H2784_12310 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_12310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H2784_12315 PF00764 Arginosuccinate synthase H2784_12320 PF00563 EAL domain H2784_12320 PF00360 Phytochrome region H2784_12320 PF01590 GAF domain H2784_12320 PF00990 Diguanylate cyclase, GGDEF domain H2784_12325 PF01979 Amidohydrolase family H2784_12330 PF00929 Exonuclease H2784_12340 PF00593 TonB dependent receptor H2784_12340 PF07715 TonB-dependent Receptor Plug Domain H2784_12345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H2784_12345 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_12350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H2784_12350 PF00005 ABC transporter H2784_12355 PF12911 N-terminal TM domain of oligopeptide transport permease C H2784_12355 PF00528 Binding-protein-dependent transport system inner membrane component H2784_12360 PF00528 Binding-protein-dependent transport system inner membrane component H2784_12365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H2784_12370 PF01464 Transglycosylase SLT domain H2784_12370 PF01464 Transglycosylase SLT domain H2784_12370 PF01476 LysM domain H2784_12370 PF01476 LysM domain H2784_12375 PF00929 Exonuclease H2784_12385 PF00293 NUDIX domain H2784_12385 PF09297 NADH pyrophosphatase zinc ribbon domain H2784_12395 PF04972 BON domain H2784_12400 PF02021 Uncharacterised protein family UPF0102 H2784_12405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H2784_12415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_12415 PF03466 LysR substrate binding domain H2784_12420 PF01810 LysE type translocator H2784_12430 PF13411 MerR HTH family regulatory protein H2784_12440 PF01494 FAD binding domain H2784_12445 PF01494 FAD binding domain H2784_12450 PF00557 Metallopeptidase family M24 H2784_12450 PF05195 Aminopeptidase P, N-terminal domain H2784_12480 PF12833 Helix-turn-helix domain H2784_12480 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H2784_12535 PF01476 LysM domain H2784_12535 PF08525 Opacity-associated protein A N-terminal motif H2784_12535 PF01551 Peptidase family M23 H2784_12580 PF12671 Putative amidase domain H2784_12780 PF01812 5-formyltetrahydrofolate cyclo-ligase family H2784_12785 PF00691 OmpA family H2784_12785 PF04355 SmpA / OmlA family H2784_12790 PF05662 Coiled stalk of trimeric autotransporter adhesin H2784_12790 PF03895 YadA-like membrane anchor domain H2784_12790 PF13018 Extended Signal Peptide of Type V secretion system H2784_12790 PF05658 Head domain of trimeric autotransporter adhesin H2784_12795 PF00004 ATPase family associated with various cellular activities (AAA) H2784_12795 PF05362 Lon protease (S16) C-terminal proteolytic domain H2784_12795 PF02190 ATP-dependent protease La (LON) substrate-binding domain H2784_12800 PF02590 Predicted SPOUT methyltransferase H2784_12805 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase H2784_12815 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H2784_12815 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H2784_12820 PF04060 Putative Fe-S cluster H2784_12825 PF10576 Iron-sulfur binding domain of endonuclease III H2784_12825 PF00633 Helix-hairpin-helix motif H2784_12825 PF00730 HhH-GPD superfamily base excision DNA repair protein H2784_12835 PF05191 Adenylate kinase, active site lid H2784_12850 PF03717 Penicillin-binding Protein dimerisation domain H2784_12850 PF00905 Penicillin binding protein transpeptidase domain H2784_12865 PF02492 CobW/HypB/UreG, nucleotide-binding domain H2784_12870 PF01730 UreF H2784_12875 PF05194 UreE urease accessory protein, C-terminal domain H2784_12875 PF02814 UreE urease accessory protein, N-terminal domain H2784_12880 PF00449 Urease alpha-subunit, N-terminal domain H2784_12880 PF01979 Amidohydrolase family H2784_12885 PF00699 Urease beta subunit H2784_12890 PF00547 Urease, gamma subunit H2784_12895 PF01774 UreD urease accessory protein H2784_12910 PF00463 Isocitrate lyase family H2784_12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_12915 PF03466 LysR substrate binding domain H2784_12920 PF01595 Cyclin M transmembrane N-terminal domain H2784_12920 PF00571 CBS domain H2784_12920 PF03471 Transporter associated domain H2784_12925 PF03600 Citrate transporter H2784_12950 PF00009 Elongation factor Tu GTP binding domain H2784_12955 PF01507 Phosphoadenosine phosphosulfate reductase family H2784_12965 PF14052 Capsule assembly protein Wzi H2784_12970 PF01336 OB-fold nucleic acid binding domain H2784_12970 PF00152 tRNA synthetases class II (D, K and N) H2784_12985 PF00301 Rubredoxin H2784_12990 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_12990 PF18113 Rubredoxin binding C-terminal domain H2784_12995 PF00561 alpha/beta hydrolase fold H2784_13000 PF03466 LysR substrate binding domain H2784_13000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_13015 PF13089 Polyphosphate kinase N-terminal domain H2784_13015 PF02503 Polyphosphate kinase middle domain H2784_13015 PF17941 Polyphosphate kinase C-terminal domain 1 H2784_13015 PF13090 Polyphosphate kinase C-terminal domain 2 H2784_13020 PF00912 Transglycosylase H2784_13025 PF01694 Rhomboid family H2784_13035 PF00005 ABC transporter H2784_13040 PF13472 GDSL-like Lipase/Acylhydrolase family H2784_13045 PF00484 Carbonic anhydrase H2784_13050 PF00561 alpha/beta hydrolase fold H2784_13060 PF07715 TonB-dependent Receptor Plug Domain H2784_13060 PF00593 TonB dependent receptor H2784_13065 PF01521 Iron-sulphur cluster biosynthesis H2784_13065 PF01106 NifU-like domain H2784_13075 PF00884 Sulfatase H2784_13080 PF03781 Sulfatase-modifying factor enzyme 1 H2784_13095 PF00291 Pyridoxal-phosphate dependent enzyme H2784_13100 PF01384 Phosphate transporter family H2784_13105 PF02965 Vitamin B12 dependent methionine synthase, activation domain H2784_13105 PF00809 Pterin binding enzyme H2784_13105 PF02310 B12 binding domain H2784_13105 PF02607 B12 binding domain H2784_13105 PF02574 Homocysteine S-methyltransferase H2784_13110 PF02779 Transketolase, pyrimidine binding domain H2784_13110 PF02780 Transketolase, C-terminal domain H2784_13115 PF00456 Transketolase, thiamine diphosphate binding domain H2784_13120 PF07690 Major Facilitator Superfamily H2784_13130 PF03466 LysR substrate binding domain H2784_13130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_13140 PF01263 Aldose 1-epimerase H2784_13145 PF07690 Major Facilitator Superfamily H2784_13150 PF02311 AraC-like ligand binding domain H2784_13150 PF12833 Helix-turn-helix domain H2784_13155 PF04960 Glutaminase H2784_13160 PF01327 Polypeptide deformylase H2784_13165 PF07690 Major Facilitator Superfamily H2784_13175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H2784_13175 PF00205 Thiamine pyrophosphate enzyme, central domain H2784_13175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H2784_13180 PF00171 Aldehyde dehydrogenase family H2784_13185 PF01958 Domain of unknown function DUF108 H2784_13185 PF03447 Homoserine dehydrogenase, NAD binding domain H2784_13195 PF12697 Alpha/beta hydrolase family H2784_13205 PF07690 Major Facilitator Superfamily H2784_13210 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_13210 PF14759 Reductase C-terminal H2784_13215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H2784_13225 PF00355 Rieske [2Fe-2S] domain H2784_13235 PF00355 Rieske [2Fe-2S] domain H2784_13240 PF09339 IclR helix-turn-helix domain H2784_13240 PF01614 Bacterial transcriptional regulator H2784_13255 PF00378 Enoyl-CoA hydratase/isomerase H2784_13265 PF00535 Glycosyl transferase family 2 H2784_13270 PF01522 Polysaccharide deacetylase H2784_13270 PF14883 Hypothetical glycosyl hydrolase family 13 H2784_13275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H2784_13280 PF07152 YaeQ protein H2784_13285 PF00375 Sodium:dicarboxylate symporter family H2784_13290 PF02492 CobW/HypB/UreG, nucleotide-binding domain H2784_13290 PF07683 Cobalamin synthesis protein cobW C-terminal domain H2784_13300 PF03061 Thioesterase superfamily H2784_13310 PF02028 BCCT, betaine/carnitine/choline family transporter H2784_13315 PF02028 BCCT, betaine/carnitine/choline family transporter H2784_13320 PF00440 Bacterial regulatory proteins, tetR family H2784_13320 PF13977 BetI-type transcriptional repressor, C-terminal H2784_13325 PF00171 Aldehyde dehydrogenase family H2784_13330 PF05199 GMC oxidoreductase H2784_13330 PF00732 GMC oxidoreductase H2784_13335 PF06039 Malate:quinone oxidoreductase (Mqo) H2784_13345 PF02574 Homocysteine S-methyltransferase H2784_13350 PF13520 Amino acid permease H2784_13380 PF04717 Type VI secretion system, phage-baseplate injector H2784_13380 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H2784_13380 PF13296 Putative type VI secretion system Rhs element Vgr H2784_13395 PF00701 Dihydrodipicolinate synthetase family H2784_13400 PF00083 Sugar (and other) transporter H2784_13460 PF18019 HD domain H2784_13480 PF09615 CRISPR-associated protein (Cas_Csy3) H2784_13490 PF01867 CRISPR associated protein Cas1 H2784_13510 PF01381 Helix-turn-helix H2784_13540 PF13356 Arm DNA-binding domain H2784_13540 PF00589 Phage integrase family H2784_13555 PF07690 Major Facilitator Superfamily H2784_13560 PF13533 Biotin-lipoyl like H2784_13565 PF03061 Thioesterase superfamily H2784_13570 PF00490 Delta-aminolevulinic acid dehydratase H2784_13575 PF01266 FAD dependent oxidoreductase H2784_13580 PF08338 Domain of unknown function (DUF1731) H2784_13580 PF01370 NAD dependent epimerase/dehydratase family H2784_13600 PF00149 Calcineurin-like phosphoesterase H2784_13600 PF12320 Type 5 capsule protein repressor C-terminal domain H2784_13610 PF01168 Alanine racemase, N-terminal domain H2784_13615 PF00437 Type II/IV secretion system protein H2784_13620 PF00437 Type II/IV secretion system protein H2784_13625 PF01475 Ferric uptake regulator family H2784_13630 PF04355 SmpA / OmlA family H2784_13635 PF03658 RnfH family Ubiquitin H2784_13645 PF01814 Hemerythrin HHE cation binding domain H2784_13650 PF13230 Glutamine amidotransferases class-II H2784_13660 PF00696 Amino acid kinase family H2784_13665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H2784_13665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H2784_13665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H2784_13665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H2784_13670 PF00692 dUTPase H2784_13675 PF00580 UvrD/REP helicase N-terminal domain H2784_13675 PF13361 UvrD-like helicase C-terminal domain H2784_13680 PF13488 Glycine zipper H2784_13680 PF00691 OmpA family H2784_13685 PF01553 Acyltransferase H2784_13695 PF03775 Septum formation inhibitor MinC, C-terminal domain H2784_13700 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H2784_13705 PF03776 Septum formation topological specificity factor MinE H2784_13720 PF01810 LysE type translocator H2784_13725 PF17854 FtsK alpha domain H2784_13725 PF09397 Ftsk gamma domain H2784_13725 PF01580 FtsK/SpoIIIE family H2784_13725 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H2784_13730 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_13735 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H2784_13740 PF04377 Arginine-tRNA-protein transferase, C terminus H2784_13740 PF04376 Arginine-tRNA-protein transferase, N terminus H2784_13745 PF00583 Acetyltransferase (GNAT) family H2784_13760 PF03143 Elongation factor Tu C-terminal domain H2784_13760 PF03144 Elongation factor Tu domain 2 H2784_13760 PF00009 Elongation factor Tu GTP binding domain H2784_13765 PF00679 Elongation factor G C-terminus H2784_13765 PF03764 Elongation factor G, domain IV H2784_13765 PF00009 Elongation factor Tu GTP binding domain H2784_13765 PF03144 Elongation factor Tu domain 2 H2784_13765 PF14492 Elongation Factor G, domain II H2784_13770 PF00177 Ribosomal protein S7p/S5e H2784_13775 PF00164 Ribosomal protein S12/S23 H2784_13785 PF00109 Beta-ketoacyl synthase, N-terminal domain H2784_13785 PF02801 Beta-ketoacyl synthase, C-terminal domain H2784_13790 PF03653 Uncharacterised protein family (UPF0093) H2784_13795 PF05726 Pirin C-terminal cupin domain H2784_13795 PF02678 Pirin H2784_13805 PF00795 Carbon-nitrogen hydrolase H2784_13805 PF02540 NAD synthase H2784_13820 PF00175 Oxidoreductase NAD-binding domain H2784_13820 PF00111 2Fe-2S iron-sulfur cluster binding domain H2784_13820 PF00970 Oxidoreductase FAD-binding domain H2784_13825 PF00171 Aldehyde dehydrogenase family H2784_13830 PF00355 Rieske [2Fe-2S] domain H2784_13830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H2784_13835 PF07859 alpha/beta hydrolase fold H2784_13840 PF02028 BCCT, betaine/carnitine/choline family transporter H2784_13845 PF00180 Isocitrate/isopropylmalate dehydrogenase H2784_13850 PF03466 LysR substrate binding domain H2784_13850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_13870 PF00037 4Fe-4S binding domain H2784_13875 PF01467 Cytidylyltransferase-like H2784_13880 PF01668 SmpB protein H2784_13885 PF03358 NADPH-dependent FMN reductase H2784_13890 PF02578 Multi-copper polyphenol oxidoreductase laccase H2784_13895 PF00849 RNA pseudouridylate synthase H2784_13895 PF01479 S4 domain H2784_13900 PF13525 Outer membrane lipoprotein H2784_13905 PF01807 CHC2 zinc finger H2784_13905 PF08278 DNA primase DnaG DnaB-binding H2784_13905 PF10410 DnaB-helicase binding domain of primase H2784_13905 PF08275 DNA primase catalytic core, N-terminal domain H2784_13910 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H2784_13910 PF01488 Shikimate / quinate 5-dehydrogenase H2784_13910 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H2784_13920 PF03550 Outer membrane lipoprotein LolB H2784_13925 PF08544 GHMP kinases C terminal H2784_13925 PF00288 GHMP kinases N terminal domain H2784_13950 PF14572 Phosphoribosyl synthetase-associated domain H2784_13950 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H2784_13955 PF01386 Ribosomal L25p family H2784_13960 PF01195 Peptidyl-tRNA hydrolase H2784_13965 PF02261 Aspartate decarboxylase H2784_13980 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H2784_13990 PF02581 Thiamine monophosphate synthase H2784_13990 PF03070 TENA/THI-4/PQQC family H2784_13990 PF08543 Phosphomethylpyrimidine kinase H2784_13995 PF01476 LysM domain H2784_13995 PF04972 BON domain H2784_14000 PF00550 Phosphopantetheine attachment site H2784_14010 PF00698 Acyl transferase domain H2784_14015 PF01783 Ribosomal L32p protein family H2784_14020 PF02620 Large ribosomal RNA subunit accumulation protein YceD H2784_14025 PF04315 Elongation factor P hydroxylase H2784_14030 PF01300 Telomere recombination H2784_14035 PF02616 Segregation and condensation protein ScpA H2784_14040 PF04079 Segregation and condensation complex subunit ScpB H2784_14045 PF00849 RNA pseudouridylate synthase H2784_14045 PF01479 S4 domain H2784_14060 PF00155 Aminotransferase class I and II H2784_14065 PF04055 Radical SAM superfamily H2784_14065 PF00202 Aminotransferase class-III H2784_14065 PF06968 Biotin and Thiamin Synthesis associated domain H2784_14070 PF12697 Alpha/beta hydrolase family H2784_14070 PF08241 Methyltransferase domain H2784_14075 PF02358 Trehalose-phosphatase H2784_14080 PF00982 Glycosyltransferase family 20 H2784_14085 PF07690 Major Facilitator Superfamily H2784_14090 PF00210 Ferritin-like domain H2784_14095 PF00533 BRCA1 C Terminus (BRCT) domain H2784_14095 PF12826 Helix-hairpin-helix motif H2784_14095 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H2784_14095 PF03120 NAD-dependent DNA ligase OB-fold domain H2784_14095 PF01653 NAD-dependent DNA ligase adenylation domain H2784_14105 PF06470 SMC proteins Flexible Hinge Domain H2784_14105 PF02463 RecF/RecN/SMC N terminal domain H2784_14115 PF01925 Sulfite exporter TauE/SafE H2784_14125 PF03309 Type III pantothenate kinase H2784_14130 PF00448 SRP54-type protein, GTPase domain H2784_14130 PF02881 SRP54-type protein, helical bundle domain H2784_14130 PF02978 Signal peptide binding domain H2784_14140 PF01207 Dihydrouridine synthase (Dus) H2784_14170 PF00692 dUTPase H2784_14185 PF01048 Phosphorylase superfamily H2784_14190 PF10609 NUBPL iron-transfer P-loop NTPase H2784_14200 PF09334 tRNA synthetases class I (M) H2784_14200 PF01588 Putative tRNA binding domain H2784_14225 PF13533 Biotin-lipoyl like H2784_14230 PF00291 Pyridoxal-phosphate dependent enzyme H2784_14245 PF05552 Conserved TM helix H2784_14260 PF00175 Oxidoreductase NAD-binding domain H2784_14260 PF00970 Oxidoreductase FAD-binding domain H2784_14265 PF03466 LysR substrate binding domain H2784_14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_14270 PF00313 'Cold-shock' DNA-binding domain H2784_14280 PF00361 Proton-conducting membrane transporter H2784_14285 PF00361 Proton-conducting membrane transporter H2784_14290 PF00361 Proton-conducting membrane transporter H2784_14290 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H2784_14295 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H2784_14300 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 H2784_14305 PF12838 4Fe-4S dicluster domain H2784_14310 PF00146 NADH dehydrogenase H2784_14315 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H2784_14315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H2784_14315 PF00384 Molybdopterin oxidoreductase H2784_14320 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region H2784_14320 PF10531 SLBB domain H2784_14320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H2784_14330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit H2784_14330 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit H2784_14335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit H2784_14340 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 H2784_14345 PF17151 Periplasmic sensor domain H2784_14345 PF00990 Diguanylate cyclase, GGDEF domain H2784_14355 PF00672 HAMP domain H2784_14355 PF00512 His Kinase A (phospho-acceptor) domain H2784_14355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_14360 PF00072 Response regulator receiver domain H2784_14360 PF00486 Transcriptional regulatory protein, C terminal H2784_14370 PF03477 ATP cone domain H2784_14370 PF02867 Ribonucleotide reductase, barrel domain H2784_14370 PF00317 Ribonucleotide reductase, all-alpha domain H2784_14380 PF00268 Ribonucleotide reductase, small chain H2784_14395 PF17074 Darcynin, domain of unknown function H2784_14430 PF01613 Flavin reductase like domain H2784_14435 PF08267 Cobalamin-independent synthase, N-terminal domain H2784_14435 PF01717 Cobalamin-independent synthase, Catalytic domain H2784_14445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_14445 PF03466 LysR substrate binding domain H2784_14450 PF01810 LysE type translocator H2784_14455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_14455 PF03466 LysR substrate binding domain H2784_14460 PF07690 Major Facilitator Superfamily H2784_14470 PF03466 LysR substrate binding domain H2784_14470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_14475 PF14537 Cytochrome c3 H2784_14475 PF00890 FAD binding domain H2784_14485 PF02515 CoA-transferase family III H2784_14490 PF07690 Major Facilitator Superfamily H2784_14495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_14495 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_14495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_14500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_14500 PF03466 LysR substrate binding domain H2784_14505 PF08240 Alcohol dehydrogenase GroES-like domain H2784_14505 PF00107 Zinc-binding dehydrogenase H2784_14510 PF00962 Adenosine/AMP deaminase H2784_14535 PF02445 Quinolinate synthetase A protein H2784_14540 PF01960 ArgJ family H2784_14545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H2784_14545 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H2784_14550 PF00893 Small Multidrug Resistance protein H2784_14565 PF07732 Multicopper oxidase H2784_14565 PF00394 Multicopper oxidase H2784_14565 PF07731 Multicopper oxidase H2784_14580 PF00834 Ribulose-phosphate 3 epimerase family H2784_14590 PF00756 Putative esterase H2784_14600 PF04445 Putative SAM-dependent methyltransferase H2784_14605 PF00814 Glycoprotease family H2784_14610 PF00132 Bacterial transferase hexapeptide (six repeats) H2784_14615 PF00293 NUDIX domain H2784_14655 PF04715 Anthranilate synthase component I, N terminal region H2784_14655 PF00425 chorismate binding enzyme H2784_14660 PF00155 Aminotransferase class I and II H2784_14665 PF00815 Histidinol dehydrogenase H2784_14670 PF01634 ATP phosphoribosyltransferase H2784_14675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H2784_14680 PF01722 BolA-like protein H2784_14685 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H2784_14690 PF00309 Sigma-54 factor, Activator interacting domain (AID) H2784_14690 PF04963 Sigma-54 factor, core binding domain H2784_14690 PF04552 Sigma-54, DNA binding domain H2784_14735 PF00795 Carbon-nitrogen hydrolase H2784_14745 PF01047 MarR family H2784_14750 PF02566 OsmC-like protein H2784_14755 PF00437 Type II/IV secretion system protein H2784_14775 PF01367 5'-3' exonuclease, C-terminal SAM fold H2784_14775 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H2784_14775 PF00476 DNA polymerase family A H2784_14775 PF01612 3'-5' exonuclease H2784_14780 PF02325 YGGT family H2784_14785 PF14748 Pyrroline-5-carboxylate reductase dimerisation H2784_14785 PF03807 NADP oxidoreductase coenzyme F420-dependent H2784_14790 PF01171 PP-loop family H2784_14790 PF09179 TilS substrate binding domain H2784_14790 PF11734 TilS substrate C-terminal domain H2784_14795 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H2784_14800 PF02541 Ppx/GppA phosphatase family H2784_14805 PF00085 Thioredoxin H2784_14810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H2784_14810 PF07498 Rho termination factor, N-terminal domain H2784_14810 PF07497 Rho termination factor, RNA-binding domain H2784_14825 PF00216 Bacterial DNA-binding protein H2784_14830 PF03484 tRNA synthetase B5 domain H2784_14830 PF03147 Ferredoxin-fold anticodon binding domain H2784_14830 PF01588 Putative tRNA binding domain H2784_14830 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H2784_14830 PF03483 B3/4 domain H2784_14835 PF01409 tRNA synthetases class II core domain (F) H2784_14835 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H2784_14855 PF00453 Ribosomal protein L20 H2784_14860 PF01632 Ribosomal protein L35 H2784_14865 PF07690 Major Facilitator Superfamily H2784_14870 PF09335 SNARE associated Golgi protein H2784_14875 PF00043 Glutathione S-transferase, C-terminal domain H2784_14875 PF02798 Glutathione S-transferase, N-terminal domain H2784_14880 PF05198 Translation initiation factor IF-3, N-terminal domain H2784_14880 PF00707 Translation initiation factor IF-3, C-terminal domain H2784_14885 PF03129 Anticodon binding domain H2784_14885 PF02824 TGS domain H2784_14885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H2784_14885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H2784_14890 PF00501 AMP-binding enzyme H2784_14890 PF13193 AMP-binding enzyme C-terminal domain H2784_14895 PF04751 Protein of unknown function (DUF615) H2784_14900 PF00381 PTS HPr component phosphorylation site H2784_14905 PF03668 P-loop ATPase protein family H2784_14910 PF02569 Pantoate-beta-alanine ligase H2784_14915 PF02548 Ketopantoate hydroxymethyltransferase H2784_14920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H2784_14925 PF01743 Poly A polymerase head domain H2784_14925 PF12626 Polymerase A arginine-rich C-terminus H2784_14925 PF12627 Probable RNA and SrmB- binding site of polymerase A H2784_14935 PF03819 MazG nucleotide pyrophosphohydrolase domain H2784_14945 PF13291 ACT domain H2784_14945 PF04607 Region found in RelA / SpoT proteins H2784_14945 PF02824 TGS domain H2784_14950 PF05958 tRNA (Uracil-5-)-methyltransferase H2784_14960 PF00291 Pyridoxal-phosphate dependent enzyme H2784_14965 PF00672 HAMP domain H2784_14965 PF01627 Hpt domain H2784_14965 PF00512 His Kinase A (phospho-acceptor) domain H2784_14965 PF00072 Response regulator receiver domain H2784_14965 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H2784_14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_14970 PF00378 Enoyl-CoA hydratase/isomerase H2784_14975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H2784_14975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H2784_14980 PF01261 Xylose isomerase-like TIM barrel H2784_14990 PF00106 short chain dehydrogenase H2784_14995 PF02233 NAD(P) transhydrogenase beta subunit H2784_15000 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H2784_15005 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H2784_15005 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H2784_15010 PF00892 EamA-like transporter family H2784_15020 PF07690 Major Facilitator Superfamily H2784_15025 PF01207 Dihydrouridine synthase (Dus) H2784_15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_15035 PF03466 LysR substrate binding domain H2784_15045 PF00899 ThiF family H2784_15050 PF00330 Aconitase family (aconitate hydratase) H2784_15050 PF00694 Aconitase C-terminal domain H2784_15055 PF01026 TatD related DNase H2784_15070 PF03144 Elongation factor Tu domain 2 H2784_15070 PF16658 Class II release factor RF3, C-terminal domain H2784_15070 PF00009 Elongation factor Tu GTP binding domain H2784_15090 PF00563 EAL domain H2784_15090 PF03707 Bacterial signalling protein N terminal repeat H2784_15090 PF00990 Diguanylate cyclase, GGDEF domain H2784_15095 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H2784_15095 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H2784_15100 PF10369 Small subunit of acetolactate synthase H2784_15105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H2784_15105 PF00205 Thiamine pyrophosphate enzyme, central domain H2784_15105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H2784_15115 PF08264 Anticodon-binding domain of tRNA H2784_15115 PF00133 tRNA synthetases class I (I, L, M and V) H2784_15115 PF09334 tRNA synthetases class I (M) H2784_15115 PF13603 Leucyl-tRNA synthetase, Domain 2 H2784_15130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H2784_15135 PF00005 ABC transporter H2784_15135 PF02687 FtsX-like permease family H2784_15135 PF12704 MacB-like periplasmic core domain H2784_15140 PF02321 Outer membrane efflux protein H2784_15155 PF00929 Exonuclease H2784_15160 PF03193 RsgA GTPase H2784_15170 PF00462 Glutaredoxin H2784_15175 PF02556 Preprotein translocase subunit SecB H2784_15185 PF01926 50S ribosome-binding GTPase H2784_15185 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H2784_15190 PF13360 PQQ-like domain H2784_15200 PF03129 Anticodon binding domain H2784_15200 PF13393 Histidyl-tRNA synthetase H2784_15205 PF04551 GcpE protein H2784_15210 PF13464 Domain of unknown function (DUF4115) H2784_15220 PF04055 Radical SAM superfamily H2784_15225 PF00334 Nucleoside diphosphate kinase H2784_15230 PF04384 Iron-sulphur cluster assembly H2784_15235 PF01569 PAP2 superfamily H2784_15240 PF13439 Glycosyltransferase Family 4 H2784_15240 PF00534 Glycosyl transferases group 1 H2784_15245 PF11818 C-terminal domain of tail specific protease (DUF3340) H2784_15245 PF00595 PDZ domain H2784_15245 PF17804 Tail specific protease N-terminal domain H2784_15245 PF03572 Peptidase family S41 H2784_15250 PF00933 Glycosyl hydrolase family 3 N terminal domain H2784_15260 PF00561 alpha/beta hydrolase fold H2784_15265 PF00171 Aldehyde dehydrogenase family H2784_15275 PF01202 Shikimate kinase H2784_15280 PF02447 GntP family permease H2784_15285 PF01081 KDPG and KHG aldolase H2784_15290 PF00920 Dehydratase family H2784_15295 PF00871 Acetokinase family H2784_15300 PF07085 DRTGG domain H2784_15300 PF01515 Phosphate acetyl/butaryl transferase H2784_15305 PF05681 Fumarate hydratase (Fumerase) H2784_15305 PF05683 Fumarase C-terminus H2784_15320 PF07724 AAA domain (Cdc48 subfamily) H2784_15320 PF10431 C-terminal, D2-small domain, of ClpB protein H2784_15320 PF06689 ClpX C4-type zinc finger H2784_15325 PF00574 Clp protease H2784_15330 PF05698 Bacterial trigger factor protein (TF) C-terminus H2784_15330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H2784_15330 PF05697 Bacterial trigger factor protein (TF) H2784_15335 PF07715 TonB-dependent Receptor Plug Domain H2784_15335 PF00593 TonB dependent receptor H2784_15340 PF13640 2OG-Fe(II) oxygenase superfamily H2784_15340 PF18331 PKHD-type hydroxylase C-terminal domain H2784_15345 PF00682 HMGL-like H2784_15345 PF08502 LeuA allosteric (dimerisation) domain H2784_15350 PF00561 alpha/beta hydrolase fold H2784_15355 PF00561 alpha/beta hydrolase fold H2784_15355 PF07021 Methionine biosynthesis protein MetW H2784_15365 PF01725 Ham1 family H2784_15375 PF02416 mttA/Hcf106 family H2784_15380 PF02416 mttA/Hcf106 family H2784_15385 PF00902 Sec-independent protein translocase protein (TatC) H2784_15405 PF01790 Prolipoprotein diacylglyceryl transferase H2784_15420 PF00303 Thymidylate synthase H2784_15425 PF00186 Dihydrofolate reductase H2784_15435 PF01625 Peptide methionine sulfoxide reductase H2784_15445 PF01618 MotA/TolQ/ExbB proton channel family H2784_15455 PF00551 Formyl transferase H2784_15455 PF01842 ACT domain H2784_15465 PF00171 Aldehyde dehydrogenase family H2784_15470 PF00830 Ribosomal L28 family H2784_15475 PF00471 Ribosomal protein L33 H2784_15480 PF02254 TrkA-N domain H2784_15480 PF00999 Sodium/hydrogen exchanger family H2784_15500 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) H2784_15505 PF00580 UvrD/REP helicase N-terminal domain H2784_15505 PF13361 UvrD-like helicase C-terminal domain H2784_15520 PF08272 Topoisomerase I zinc-ribbon-like H2784_15520 PF01131 DNA topoisomerase H2784_15520 PF01751 Toprim domain H2784_15520 PF01396 Topoisomerase DNA binding C4 zinc finger H2784_15530 PF01638 HxlR-like helix-turn-helix H2784_15535 PF08240 Alcohol dehydrogenase GroES-like domain H2784_15535 PF00107 Zinc-binding dehydrogenase H2784_15540 PF04102 SlyX H2784_15545 PF00005 ABC transporter H2784_15545 PF16326 ABC transporter C-terminal domain H2784_15545 PF12848 ABC transporter H2784_15550 PF01810 LysE type translocator H2784_15555 PF03279 Bacterial lipid A biosynthesis acyltransferase H2784_15565 PF00375 Sodium:dicarboxylate symporter family H2784_15575 PF02774 Semialdehyde dehydrogenase, dimerisation domain H2784_15575 PF01118 Semialdehyde dehydrogenase, NAD binding domain H2784_15595 PF01416 tRNA pseudouridine synthase H2784_15605 PF01176 Translation initiation factor 1A / IF-1 H2784_15620 PF00180 Isocitrate/isopropylmalate dehydrogenase H2784_15630 PF00694 Aconitase C-terminal domain H2784_15635 PF00330 Aconitase family (aconitate hydratase) H2784_15645 PF03466 LysR substrate binding domain H2784_15645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_15665 PF00293 NUDIX domain H2784_15670 PF02896 PEP-utilising enzyme, TIM barrel domain H2784_15670 PF01590 GAF domain H2784_15670 PF00391 PEP-utilising enzyme, mobile domain H2784_15670 PF05524 PEP-utilising enzyme, N-terminal H2784_15675 PF00141 Peroxidase H2784_15680 PF12706 Beta-lactamase superfamily domain H2784_15685 PF03466 LysR substrate binding domain H2784_15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_15695 PF02798 Glutathione S-transferase, N-terminal domain H2784_15700 PF08279 HTH domain H2784_15700 PF13280 WYL domain H2784_15705 PF13419 Haloacid dehalogenase-like hydrolase H2784_15710 PF00849 RNA pseudouridylate synthase H2784_15710 PF01479 S4 domain H2784_15715 PF12111 Polyribonucleotide phosphorylase C terminal H2784_15715 PF10150 Ribonuclease E/G family H2784_15715 PF00575 S1 RNA binding domain H2784_15720 PF00501 AMP-binding enzyme H2784_15720 PF13193 AMP-binding enzyme C-terminal domain H2784_15735 PF03466 LysR substrate binding domain H2784_15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H2784_15745 PF04055 Radical SAM superfamily H2784_15745 PF06969 HemN C-terminal domain H2784_15755 PF01554 MatE H2784_15760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_15760 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_15760 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H2784_15765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_15765 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H2784_15770 PF03109 ABC1 family H2784_15775 PF01197 Ribosomal protein L31 H2784_15790 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H2784_15800 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H2784_15800 PF13247 4Fe-4S dicluster domain H2784_15800 PF07992 Pyridine nucleotide-disulphide oxidoreductase H2784_15810 PF03884 DNA gyrase inhibitor YacG H2784_15815 PF00753 Metallo-beta-lactamase superfamily H2784_15820 PF00762 Ferrochelatase H2784_15830 PF01177 Asp/Glu/Hydantoin racemase H2784_15845 PF01206 Sulfurtransferase TusA H2784_15850 PF03471 Transporter associated domain H2784_15850 PF00571 CBS domain H2784_15855 PF00795 Carbon-nitrogen hydrolase H2784_15860 PF01588 Putative tRNA binding domain H2784_15870 PF08334 Type II secretion system (T2SS), protein G H2784_15870 PF07963 Prokaryotic N-terminal methylation motif H2784_15875 PF00482 Type II secretion system (T2SS), protein F H2784_15880 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H2784_15880 PF18074 Primosomal protein N C-terminal domain H2784_15880 PF17764 3′ DNA-binding domain (3′BD) H2784_15880 PF00271 Helicase conserved C-terminal domain H2784_15880 PF00270 DEAD/DEAH box helicase H2784_15885 PF02254 TrkA-N domain H2784_15885 PF00999 Sodium/hydrogen exchanger family H2784_15890 PF01430 Hsp33 protein H2784_15900 PF01556 DnaJ C terminal domain H2784_15900 PF00226 DnaJ domain H2784_15910 PF01544 CorA-like Mg2+ transporter protein H2784_15915 PF00013 KH domain H2784_15915 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H2784_15915 PF01138 3' exoribonuclease family, domain 1 H2784_15915 PF03725 3' exoribonuclease family, domain 2 H2784_15915 PF00575 S1 RNA binding domain H2784_15920 PF00312 Ribosomal protein S15 H2784_15925 PF00144 Beta-lactamase H2784_15930 PF13538 UvrD-like helicase C-terminal domain H2784_15935 PF12705 PD-(D/E)XK nuclease superfamily H2784_15935 PF00580 UvrD/REP helicase N-terminal domain H2784_15935 PF13361 UvrD-like helicase C-terminal domain H2784_15940 PF17946 RecC C-terminal domain H2784_15950 PF03976 Polyphosphate kinase 2 (PPK2) H2784_15960 PF01209 ubiE/COQ5 methyltransferase family H2784_15970 PF03109 ABC1 family H2784_15975 PF01494 FAD binding domain H2784_15980 PF01502 Phosphoribosyl-AMP cyclohydrolase H2784_15995 PF13244 Domain of unknown function (DUF4040) H2784_15995 PF00361 Proton-conducting membrane transporter H2784_15995 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H2784_15995 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter H2784_16000 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H2784_16005 PF00361 Proton-conducting membrane transporter H2784_16010 PF01899 Na+/H+ ion antiporter subunit H2784_16015 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) H2784_16020 PF03334 Na+/H+ antiporter subunit H2784_16025 PF02033 Ribosome-binding factor A H2784_16030 PF08364 Bacterial translation initiation factor IF-2 associated region H2784_16030 PF04760 Translation initiation factor IF-2, N-terminal region H2784_16030 PF11987 Translation-initiation factor 2 H2784_16030 PF00009 Elongation factor Tu GTP binding domain H2784_16035 PF13184 NusA-like KH domain H2784_16035 PF08529 NusA N-terminal domain H2784_16035 PF00575 S1 RNA binding domain H2784_16040 PF02576 RimP N-terminal domain H2784_16040 PF17384 RimP C-terminal SH3 domain H2784_16060 PF03840 Preprotein translocase SecG subunit H2784_16065 PF00121 Triosephosphate isomerase H2784_16070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H2784_16070 PF00437 Type II/IV secretion system protein H2784_16075 PF00482 Type II secretion system (T2SS), protein F H2784_16080 PF06750 Bacterial Peptidase A24 N-terminal domain H2784_16080 PF01478 Type IV leader peptidase family H2784_16085 PF01121 Dephospho-CoA kinase H2784_16095 PF00588 SpoU rRNA Methylase family H2784_16095 PF08032 RNA 2'-O ribose methyltransferase substrate binding H2784_16100 PF06865 Pyrimidine/purine nucleoside phosphorylase H2784_16110 PF02463 RecF/RecN/SMC N terminal domain H2784_16115 PF02622 Uncharacterized ACR, COG1678 H2784_16120 PF03652 Holliday junction resolvase H2784_16125 PF13533 Biotin-lipoyl like H2784_16150 PF02805 Metal binding domain of Ada H2784_16150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H2784_16150 PF12833 Helix-turn-helix domain H2784_16150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H2784_16155 PF01066 CDP-alcohol phosphatidyltransferase H2784_16165 PF01541 GIY-YIG catalytic domain H2784_16165 PF08459 UvrC Helix-hairpin-helix N-terminal H2784_16165 PF02151 UvrB/uvrC motif H2784_16180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H2784_16180 PF00378 Enoyl-CoA hydratase/isomerase H2784_16180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H2784_16185 PF02803 Thiolase, C-terminal domain H2784_16185 PF00108 Thiolase, N-terminal domain H2784_16205 PF13411 MerR HTH family regulatory protein H2784_16215 PF01323 DSBA-like thioredoxin domain H2784_16230 PF00183 Hsp90 protein H2784_16230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_16245 PF03553 Na+/H+ antiporter family H2784_16245 PF13726 Na+-H+ antiporter family H2784_16270 PF05000 RNA polymerase Rpb1, domain 4 H2784_16270 PF04983 RNA polymerase Rpb1, domain 3 H2784_16270 PF04997 RNA polymerase Rpb1, domain 1 H2784_16270 PF04998 RNA polymerase Rpb1, domain 5 H2784_16270 PF00623 RNA polymerase Rpb1, domain 2 H2784_16275 PF04563 RNA polymerase beta subunit H2784_16275 PF04561 RNA polymerase Rpb2, domain 2 H2784_16275 PF04565 RNA polymerase Rpb2, domain 3 H2784_16275 PF10385 RNA polymerase beta subunit external 1 domain H2784_16275 PF00562 RNA polymerase Rpb2, domain 6 H2784_16275 PF04560 RNA polymerase Rpb2, domain 7 H2784_16280 PF00542 Ribosomal protein L7/L12 C-terminal domain H2784_16280 PF16320 Ribosomal protein L7/L12 dimerisation domain H2784_16285 PF00466 Ribosomal protein L10 H2784_16290 PF00687 Ribosomal protein L1p/L10e family H2784_16295 PF00298 Ribosomal protein L11, RNA binding domain H2784_16295 PF03946 Ribosomal protein L11, N-terminal domain H2784_16300 PF02357 Transcription termination factor nusG H2784_16300 PF00467 KOW motif H2784_16305 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H2784_16315 PF03143 Elongation factor Tu C-terminal domain H2784_16315 PF00009 Elongation factor Tu GTP binding domain H2784_16315 PF03144 Elongation factor Tu domain 2 H2784_16340 PF04715 Anthranilate synthase component I, N terminal region H2784_16340 PF00425 chorismate binding enzyme H2784_16345 PF13419 Haloacid dehalogenase-like hydrolase H2784_16350 PF12401 Protein of unknown function (DUF2662) H2784_16350 PF00498 FHA domain H2784_16355 PF00263 Bacterial type II and III secretion system protein H2784_16355 PF03958 Bacterial type II/III secretion system short domain H2784_16370 PF00816 H-NS histone family H2784_16395 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H2784_16395 PF03900 Porphobilinogen deaminase, C-terminal domain H2784_16400 PF04397 LytTr DNA-binding domain H2784_16400 PF00072 Response regulator receiver domain H2784_16405 PF07694 5TMR of 5TMR-LYT H2784_16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_16405 PF06580 Histidine kinase H2784_16410 PF00206 Lyase H2784_16410 PF14698 Argininosuccinate lyase C-terminal H2784_16415 PF04362 Bacterial Fe(2+) trafficking H2784_16420 PF01895 PhoU domain H2784_16430 PF00892 EamA-like transporter family H2784_16445 PF13667 ThiC-associated domain H2784_16445 PF01964 Radical SAM ThiC family H2784_16450 PF00293 NUDIX domain H2784_16455 PF00149 Calcineurin-like phosphoesterase H2784_16460 PF01258 Prokaryotic dksA/traR C4-type zinc finger H2784_16465 PF00749 tRNA synthetases class I (E and Q), catalytic domain H2784_16470 PF01098 Cell cycle protein H2784_16475 PF02875 Mur ligase family, glutamate ligase domain H2784_16475 PF08245 Mur ligase middle domain H2784_16485 PF07664 Ferrous iron transport protein B C terminus H2784_16485 PF02421 Ferrous iron transport protein B H2784_16485 PF07670 Nucleoside recognition H2784_16495 PF02899 Phage integrase, N-terminal SAM-like domain H2784_16495 PF00589 Phage integrase family H2784_16500 PF13098 Thioredoxin-like domain H2784_16500 PF10411 Disulfide bond isomerase protein N-terminus H2784_16505 PF00742 Homoserine dehydrogenase H2784_16505 PF03447 Homoserine dehydrogenase, NAD binding domain H2784_16505 PF01842 ACT domain H2784_16510 PF00291 Pyridoxal-phosphate dependent enzyme H2784_16515 PF00768 D-alanyl-D-alanine carboxypeptidase H2784_16520 PF00196 Bacterial regulatory proteins, luxR family H2784_16520 PF00072 Response regulator receiver domain H2784_16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H2784_16525 PF00512 His Kinase A (phospho-acceptor) domain H2784_16530 PF02954 Bacterial regulatory protein, Fis family H2784_16530 PF00158 Sigma-54 interaction domain H2784_16530 PF00072 Response regulator receiver domain H2784_16535 PF03572 Peptidase family S41 H2784_16535 PF00595 PDZ domain H2784_16540 PF06415 BPG-independent PGAM N-terminus (iPGM_N) H2784_16540 PF01676 Metalloenzyme superfamily H2784_16545 PF03739 Lipopolysaccharide export system permease LptF/LptG H2784_16555 PF00883 Cytosol aminopeptidase family, catalytic domain H2784_16555 PF02789 Cytosol aminopeptidase family, N-terminal domain H2784_16575 PF00677 Lumazine binding domain H2784_16585 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H2784_16585 PF01872 RibD C-terminal domain H2784_16590 PF03477 ATP cone domain H2784_16595 PF00909 Ammonium Transporter Family H2784_16600 PF00543 Nitrogen regulatory protein P-II H2784_16610 PF01078 Magnesium chelatase, subunit ChlI H2784_16610 PF13335 Magnesium chelatase, subunit ChlI C-terminal H2784_16615 PF00155 Aminotransferase class I and II H2784_16615 PF00392 Bacterial regulatory proteins, gntR family H2784_16620 PF00596 Class II Aldolase and Adducin N-terminal domain H2784_16625 PF00701 Dihydrodipicolinate synthetase family H2784_16635 PF03573 outer membrane porin, OprD family H2784_16640 PF00719 Inorganic pyrophosphatase H2784_16655 PF00501 AMP-binding enzyme H2784_16655 PF13193 AMP-binding enzyme C-terminal domain H2784_16660 PF03989 DNA gyrase C-terminal domain, beta-propeller H2784_16660 PF00521 DNA gyrase/topoisomerase IV, subunit A H2784_16665 PF07690 Major Facilitator Superfamily H2784_16670 PF03458 UPF0126 domain H2784_16675 PF02810 SEC-C motif H2784_16680 PF03741 Integral membrane protein TerC family H2784_16680 PF03471 Transporter associated domain H2784_16685 PF03641 Possible lysine decarboxylase H2784_16690 PF07690 Major Facilitator Superfamily H2784_16700 PF11799 impB/mucB/samB family C-terminal domain H2784_16700 PF00817 impB/mucB/samB family H2784_16700 PF11798 IMS family HHH motif H2784_16715 PF11842 Domain of unknown function (DUF3362) H2784_16715 PF04055 Radical SAM superfamily H2784_16715 PF08497 Radical SAM N-terminal H2784_16735 PF03358 NADPH-dependent FMN reductase H2784_16745 PF00291 Pyridoxal-phosphate dependent enzyme H2784_16780 PF00440 Bacterial regulatory proteins, tetR family H2784_16805 PF01327 Polypeptide deformylase H2784_16815 PF02481 DNA recombination-mediator protein A H2784_16815 PF17782 DprA winged helix domain H2784_16820 PF01300 Telomere recombination H2784_16825 PF00892 EamA-like transporter family H2784_16830 PF00440 Bacterial regulatory proteins, tetR family H2784_16835 PF07690 Major Facilitator Superfamily H2784_16845 PF00255 Glutathione peroxidase H2784_16855 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H2784_16860 PF02874 ATP synthase alpha/beta family, beta-barrel domain H2784_16860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H2784_16865 PF00231 ATP synthase H2784_16870 PF02874 ATP synthase alpha/beta family, beta-barrel domain H2784_16870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H2784_16870 PF00306 ATP synthase alpha/beta chain, C terminal domain H2784_16875 PF00213 ATP synthase delta (OSCP) subunit H2784_16880 PF00430 ATP synthase B/B' CF(0) H2784_16885 PF00137 ATP synthase subunit C H2784_16890 PF00119 ATP synthase A chain H2784_16910 PF00005 ABC transporter H2784_16915 PF00950 ABC 3 transport family H2784_16920 PF01810 LysE type translocator H2784_16925 PF04261 Dyp-type peroxidase family H2784_16930 PF00390 Malic enzyme, N-terminal domain H2784_16930 PF03949 Malic enzyme, NAD binding domain H2784_16935 PF03485 Arginyl tRNA synthetase N terminal domain H2784_16935 PF05746 DALR anticodon binding domain H2784_16935 PF00750 tRNA synthetases class I (R) H2784_16955 PF02678 Pirin H2784_16955 PF05726 Pirin C-terminal cupin domain H2784_16965 PF03551 Transcriptional regulator PadR-like family H2784_16970 PF13427 Domain of unknown function (DUF4111) H2784_16970 PF01909 Nucleotidyltransferase domain H2784_16975 PF00117 Glutamine amidotransferase class-I H2784_16975 PF00958 GMP synthase C terminal domain H2784_16975 PF02540 NAD synthase H2784_16980 PF04286 Protein of unknown function (DUF445) H2784_16985 PF07681 DoxX H2784_16990 PF09335 SNARE associated Golgi protein H2784_17005 PF13614 AAA domain H2784_17015 PF01722 BolA-like protein H2784_17030 PF01648 4'-phosphopantetheinyl transferase superfamily H2784_17035 PF16363 GDP-mannose 4,6 dehydratase H2784_17050 PF00501 AMP-binding enzyme H2784_17050 PF13193 AMP-binding enzyme C-terminal domain H2784_17050 PF00975 Thioesterase domain H2784_17050 PF00550 Phosphopantetheine attachment site H2784_17050 PF00668 Condensation domain H2784_17055 PF00109 Beta-ketoacyl synthase, N-terminal domain H2784_17055 PF00975 Thioesterase domain H2784_17055 PF14765 Polyketide synthase dehydratase H2784_17055 PF00550 Phosphopantetheine attachment site H2784_17055 PF08242 Methyltransferase domain H2784_17055 PF02801 Beta-ketoacyl synthase, C-terminal domain H2784_17055 PF16197 Ketoacyl-synthetase C-terminal extension H2784_17060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_17060 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_17060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_17065 PF00501 AMP-binding enzyme H2784_17070 PF03472 Autoinducer binding domain H2784_17070 PF00196 Bacterial regulatory proteins, luxR family H2784_17080 PF00765 Autoinducer synthase H2784_17085 PF07690 Major Facilitator Superfamily H2784_17085 PF00083 Sugar (and other) transporter H2784_17090 PF00378 Enoyl-CoA hydratase/isomerase H2784_17095 PF00378 Enoyl-CoA hydratase/isomerase H2784_17100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H2784_17100 PF02770 Acyl-CoA dehydrogenase, middle domain H2784_17100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H2784_17105 PF13193 AMP-binding enzyme C-terminal domain H2784_17105 PF00501 AMP-binding enzyme H2784_17110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H2784_17110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H2784_17115 PF00171 Aldehyde dehydrogenase family H2784_17125 PF00324 Amino acid permease H2784_17130 PF00324 Amino acid permease H2784_17135 PF01042 Endoribonuclease L-PSP H2784_17140 PF01168 Alanine racemase, N-terminal domain H2784_17140 PF00842 Alanine racemase, C-terminal domain H2784_17145 PF01266 FAD dependent oxidoreductase H2784_17150 PF01037 Lrp/AsnC ligand binding domain H2784_17160 PF00593 TonB dependent receptor H2784_17160 PF07715 TonB-dependent Receptor Plug Domain H2784_17175 PF00849 RNA pseudouridylate synthase H2784_17205 PF13296 Putative type VI secretion system Rhs element Vgr H2784_17205 PF04717 Type VI secretion system, phage-baseplate injector H2784_17205 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H2784_17215 PF00109 Beta-ketoacyl synthase, N-terminal domain H2784_17215 PF02801 Beta-ketoacyl synthase, C-terminal domain H2784_17245 PF00330 Aconitase family (aconitate hydratase) H2784_17245 PF00694 Aconitase C-terminal domain H2784_17250 PF00285 Citrate synthase, C-terminal domain H2784_17260 PF07729 FCD domain H2784_17260 PF00392 Bacterial regulatory proteins, gntR family H2784_17270 PF00155 Aminotransferase class I and II H2784_17275 PF09330 D-lactate dehydrogenase, membrane binding H2784_17275 PF01565 FAD binding domain H2784_17280 PF01070 FMN-dependent dehydrogenase H2784_17285 PF00392 Bacterial regulatory proteins, gntR family H2784_17285 PF07729 FCD domain H2784_17290 PF02652 L-lactate permease H2784_17295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H2784_17295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H2784_17295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H2784_17295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H2784_17300 PF16363 GDP-mannose 4,6 dehydratase H2784_17305 PF00342 Phosphoglucose isomerase H2784_17310 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H2784_17310 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H2784_17310 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H2784_17315 PF00483 Nucleotidyl transferase H2784_17320 PF02397 Bacterial sugar transferase H2784_17325 PF00535 Glycosyl transferase family 2 H2784_17330 PF00534 Glycosyl transferases group 1 H2784_17340 PF07922 Glycosyltransferase family 52 H2784_17345 PF01943 Polysaccharide biosynthesis protein H2784_17350 PF00535 Glycosyl transferase family 2 H2784_17355 PF08666 SAF domain H2784_17355 PF03102 NeuB family H2784_17370 PF02348 Cytidylyltransferase H2784_17375 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H2784_17380 PF02719 Polysaccharide biosynthesis protein H2784_17385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H2784_17385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H2784_17385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H2784_17390 PF18412 Outer-membrane lipoprotein Wza C-terminal domain H2784_17390 PF02563 Polysaccharide biosynthesis/export protein H2784_17390 PF10531 SLBB domain H2784_17395 PF01451 Low molecular weight phosphotyrosine protein phosphatase H2784_17400 PF02706 Chain length determinant protein H2784_17400 PF13807 G-rich domain on putative tyrosine kinase H2784_17400 PF13614 AAA domain H2784_17405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H2784_17405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H2784_17410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H2784_17410 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H2784_17415 PF03023 Lipid II flippase MurJ H2784_17420 PF01510 N-acetylmuramoyl-L-alanine amidase H2784_17425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H2784_17425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H2784_17435 PF04185 Phosphoesterase family H2784_17435 PF05506 Domain of unknown function (DUF756) H2784_17445 PF01138 3' exoribonuclease family, domain 1 H2784_17445 PF03725 3' exoribonuclease family, domain 2 H2784_17450 PF00487 Fatty acid desaturase H2784_17455 PF00175 Oxidoreductase NAD-binding domain H2784_17460 PF00440 Bacterial regulatory proteins, tetR family H2784_17465 PF08360 QacR-like protein, C-terminal region H2784_17465 PF00440 Bacterial regulatory proteins, tetR family H2784_17470 PF01323 DSBA-like thioredoxin domain H2784_17480 PF13419 Haloacid dehalogenase-like hydrolase H2784_17485 PF00106 short chain dehydrogenase H2784_17500 PF00583 Acetyltransferase (GNAT) family H2784_17500 PF00696 Amino acid kinase family H2784_17505 PF09084 NMT1/THI5 like H2784_17510 PF09084 NMT1/THI5 like H2784_17515 PF00296 Luciferase-like monooxygenase H2784_17520 PF00528 Binding-protein-dependent transport system inner membrane component H2784_17525 PF00005 ABC transporter H2784_17530 PF08362 YcdC-like protein, C-terminal region H2784_17530 PF00440 Bacterial regulatory proteins, tetR family H2784_17535 PF01048 Phosphorylase superfamily H2784_17545 PF06574 FAD synthetase H2784_17545 PF01687 Riboflavin kinase H2784_17550 PF06827 Zinc finger found in FPG and IleRS H2784_17550 PF08264 Anticodon-binding domain of tRNA H2784_17550 PF00133 tRNA synthetases class I (I, L, M and V) H2784_17555 PF01252 Signal peptidase (SPase) II H2784_17560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H2784_17600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H2784_17605 PF07859 alpha/beta hydrolase fold H2784_17630 PF01025 GrpE H2784_17635 PF00012 Hsp70 protein H2784_17655 PF13406 Transglycosylase SLT domain H2784_17660 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H2784_17660 PF02222 ATP-grasp domain H2784_17665 PF00731 AIR carboxylase H2784_17675 PF01225 Mur ligase family, catalytic domain H2784_17675 PF08245 Mur ligase middle domain H2784_17675 PF02875 Mur ligase family, glutamate ligase domain H2784_17685 PF01569 PAP2 superfamily H2784_17690 PF03741 Integral membrane protein TerC family H2784_17700 PF03738 Glutathionylspermidine synthase preATP-grasp H2784_17705 PF00355 Rieske [2Fe-2S] domain H2784_17710 PF01979 Amidohydrolase family H2784_17715 PF00156 Phosphoribosyl transferase domain H2784_17725 PF10411 Disulfide bond isomerase protein N-terminus H2784_17725 PF13098 Thioredoxin-like domain H2784_17730 PF01545 Cation efflux family H2784_17730 PF16916 Dimerisation domain of Zinc Transporter H2784_17735 PF02583 Metal-sensitive transcriptional repressor H2784_17740 PF01926 50S ribosome-binding GTPase H2784_17740 PF12631 MnmE helical domain H2784_17740 PF10396 GTP-binding protein TrmE N-terminus H2784_17745 PF02096 60Kd inner membrane protein H2784_17745 PF14849 YidC periplasmic domain H2784_17750 PF01809 Putative membrane protein insertion efficiency factor H2784_17755 PF00825 Ribonuclease P H2784_17760 PF00468 Ribosomal protein L34