locus-tag	class	description
FIM01_00010	COG0592	DNA-directed DNA polymerase activity
FIM01_00020	COG0187	DNA topoisomerase II activity
FIM01_00030	COG0586	Pfam SNARE associated Golgi protein
FIM01_00035	COG0488	(ABC) transporter
FIM01_00060	COG0596	Alpha beta hydrolase
FIM01_00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FIM01_00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FIM01_00115	COG0733	neurotransmitter:sodium symporter activity
FIM01_00150	COG0583	DNA-binding transcription factor activity
FIM01_00155	COG2233	PERMEase
FIM01_00170	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_00205	COG2814	Major facilitator Superfamily
FIM01_00210	COG0656	L-ascorbic acid biosynthetic process
FIM01_00215	COG0583	DNA-binding transcription factor activity
FIM01_00230	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIM01_00235	COG1064	alcohol dehydrogenase
FIM01_00240	COG2818	Glycosylase
FIM01_00255	COG1194	a g-specific adenine glycosylase
FIM01_00275	COG2983	Belongs to the UPF0260 family
FIM01_00280	COG2133	pyrroloquinoline quinone binding
FIM01_00285	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FIM01_00290	COG2116	formate transmembrane transporter activity
FIM01_00310	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FIM01_00315	COG1335	isochorismatase
FIM01_00320	COG0385	Bile acid
FIM01_00325	COG0534	Mate efflux family protein
FIM01_00330	COG1683	Conserved Protein
FIM01_00350	COG0625	glutathione transferase activity
FIM01_00360	COG1113	amino acid transport
FIM01_00370	COG0523	cobalamin synthesis protein
FIM01_00380	COG2188	Transcriptional regulator
FIM01_00410	COG0010	Belongs to the arginase family
FIM01_00425	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FIM01_00465	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_00495	COG4584	PFAM Integrase catalytic
FIM01_00495	COG2390	Transcriptional regulator
FIM01_00500	COG1484	DNA-dependent DNA replication
FIM01_00530	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
FIM01_00565	COG4584	PFAM Integrase catalytic
FIM01_00575	COG1484	DNA-dependent DNA replication
FIM01_00640	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FIM01_00650	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FIM01_00655	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FIM01_00745	COG0534	Mate efflux family protein
FIM01_00750	COG0436	Aminotransferase
FIM01_00755	COG2733	membrane
FIM01_00770	COG2918	glutathione biosynthetic process
FIM01_00780	COG3501	Rhs element vgr protein
FIM01_00785	COG5632	N-Acetylmuramoyl-L-alanine amidase
FIM01_00785	COG1388	LysM domain
FIM01_00785	COG3409	Peptidoglycan-binding domain 1 protein
FIM01_00815	COG3150	esterase
FIM01_00825	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FIM01_00835	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIM01_00845	COG2233	PERMEase
FIM01_00850	COG2351	hydroxyisourate hydrolase activity
FIM01_00885	COG3706	GGDEF domain
FIM01_00900	COG1393	Belongs to the ArsC family
FIM01_00905	COG0708	Exodeoxyribonuclease III
FIM01_00925	COG0189	ligase activity
FIM01_00945	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FIM01_00955	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FIM01_00970	COG4942	peptidase
FIM01_00980	COG0508	dehydrogenase complex catalyzes the overall conversion of
FIM01_00990	COG2119	membrane
FIM01_00995	COG4774	siderophore transport
FIM01_01000	COG0426	domain, Protein
FIM01_01000	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_01025	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FIM01_01045	COG1902	pentaerythritol trinitrate reductase activity
FIM01_01050	COG1519	Transferase
FIM01_01055	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FIM01_01060	COG0668	transmembrane transport
FIM01_01070	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FIM01_01075	COG1335	isochorismatase
FIM01_01080	COG1522	sequence-specific DNA binding
FIM01_01105	COG2205	protein histidine kinase activity
FIM01_01105	COG2198	Histidine kinase
FIM01_01105	COG0784	Response regulator, receiver
FIM01_01110	COG3162	membrane
FIM01_01115	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FIM01_01125	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIM01_01135	COG3706	GGDEF domain
FIM01_01140	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FIM01_01145	COG1309	transcriptional regulator
FIM01_01165	COG0352	thiamine-phosphate diphosphorylase activity
FIM01_01165	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FIM01_01165	COG0351	phosphomethylpyrimidine kinase
FIM01_01175	COG2814	Major facilitator Superfamily
FIM01_01190	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FIM01_01200	COG1113	amino acid transport
FIM01_01210	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FIM01_01215	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_01225	COG1335	isochorismatase
FIM01_01255	COG2814	Major facilitator Superfamily
FIM01_01260	COG0583	DNA-binding transcription factor activity
FIM01_01280	COG0667	Aldo Keto reductase
FIM01_01305	COG1733	regulation of RNA biosynthetic process
FIM01_01320	COG1733	regulation of RNA biosynthetic process
FIM01_01330	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIM01_01340	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FIM01_01400	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FIM01_01440	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FIM01_01470	COG0427	acetyl-CoA hydrolase
FIM01_01485	COG0745	RESPONSE REGULATOR receiver
FIM01_01495	COG0659	secondary active sulfate transmembrane transporter activity
FIM01_01500	COG4221	oxidoreductase activity
FIM01_01510	COG0488	(ABC) transporter
FIM01_01575	COG0833	amino acid
FIM01_01620	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FIM01_01625	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FIM01_01640	COG2226	methyltransferase
FIM01_01690	COG0067	glutamate synthase
FIM01_01690	COG0069	glutamate synthase activity
FIM01_01690	COG0070	glutamate synthase
FIM01_01695	COG0493	'glutamate synthase
FIM01_01705	COG1704	LemA family
FIM01_01710	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FIM01_01725	COG3307	-O-antigen
FIM01_01745	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FIM01_01760	COG0194	GDP metabolic process
FIM01_01810	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FIM01_01830	COG5380	lipid catabolic process
FIM01_01835	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FIM01_01860	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FIM01_01865	COG0277	FAD linked oxidase domain protein
FIM01_01875	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FIM01_01880	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIM01_01895	COG1289	transmembrane transporter activity
FIM01_01910	COG0628	permease
FIM01_01915	COG1192	Involved in chromosome partitioning
FIM01_01945	COG0833	amino acid
FIM01_01950	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FIM01_01955	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FIM01_01965	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_02005	COG0583	DNA-binding transcription factor activity
FIM01_02055	COG0517	IMP dehydrogenase activity
FIM01_02060	COG1983	PspC domain protein
FIM01_02070	COG1960	acyl-CoA dehydrogenase activity
FIM01_02085	COG0408	coproporphyrinogen oxidase activity
FIM01_02105	COG0513	Belongs to the DEAD box helicase family
FIM01_02115	COG1127	ABC transporter
FIM01_02120	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FIM01_02130	COG2854	intermembrane phospholipid transfer
FIM01_02140	COG0598	Magnesium transport protein CorA
FIM01_02150	COG0494	nUDIX hydrolase
FIM01_02155	COG1040	competence protein
FIM01_02160	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FIM01_02180	COG1946	Acyl-CoA thioesterase
FIM01_02185	COG1301	dicarboxylic acid transport
FIM01_02200	COG1959	2 iron, 2 sulfur cluster binding
FIM01_02205	COG1017	nitric oxide dioxygenase activity
FIM01_02205	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIM01_02210	COG0433	COG0433 Predicted ATPase
FIM01_02215	COG0626	cystathionine gamma-synthase activity
FIM01_02335	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FIM01_02345	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FIM01_02370	COG1960	acyl-CoA dehydrogenase activity
FIM01_02375	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FIM01_02405	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FIM01_02410	COG0339	signal peptide processing
FIM01_02415	COG0557	exoribonuclease II activity
FIM01_02460	COG0179	Fumarylacetoacetate (FAA) hydrolase
FIM01_02465	COG2169	Transcriptional regulator
FIM01_02470	COG0697	spore germination
FIM01_02475	COG1295	ribonuclease BN
FIM01_02510	COG1702	phosphate starvation-inducible protein PhoH
FIM01_02520	COG0741	lytic transglycosylase activity
FIM01_02520	COG0739	heme binding
FIM01_02520	COG1196	nuclear chromosome segregation
FIM01_02550	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FIM01_02555	COG1183	phosphatidylcholine synthase activity
FIM01_02600	COG1960	acyl-CoA dehydrogenase activity
FIM01_02605	COG1309	transcriptional regulator
FIM01_02620	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FIM01_02625	COG1960	acyl-CoA dehydrogenase activity
FIM01_02645	COG2969	positive regulation of protein catabolic process
FIM01_02655	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FIM01_02670	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FIM01_02675	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FIM01_02695	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FIM01_02705	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FIM01_02710	COG1408	metallophosphoesterase
FIM01_02720	COG2199	diguanylate cyclase activity
FIM01_02765	COG3453	Protein conserved in bacteria
FIM01_02765	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIM01_02780	COG1607	acyl-coa hydrolase
FIM01_02810	COG2350	Protein conserved in bacteria
FIM01_02820	COG0613	PHP domain protein
FIM01_02825	COG3781	membrane
FIM01_02835	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FIM01_02850	COG1862	Preprotein translocase
FIM01_02880	COG2205	protein histidine kinase activity
FIM01_02885	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FIM01_02905	COG0726	polysaccharide deacetylase
FIM01_02910	COG0463	Glycosyl transferase, family 2
FIM01_02915	COG0438	transferase activity, transferring glycosyl groups
FIM01_02980	COG1960	acyl-CoA dehydrogenase activity
FIM01_02985	COG1960	acyl-CoA dehydrogenase activity
FIM01_02995	COG2205	protein histidine kinase activity
FIM01_03000	COG0745	RESPONSE REGULATOR receiver
FIM01_03005	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FIM01_03025	COG2096	Adenosyltransferase
FIM01_03040	COG0133	tryptophan synthase activity
FIM01_03075	COG0285	dihydrofolate synthase activity
FIM01_03095	COG0450	alkyl hydroperoxide reductase
FIM01_03110	COG0477	Major facilitator Superfamily
FIM01_03115	COG1272	protein, Hemolysin III
FIM01_03125	COG2153	protein acetylation
FIM01_03145	COG0183	Belongs to the thiolase family
FIM01_03150	COG2207	Transcriptional regulator
FIM01_03170	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIM01_03190	COG0183	Belongs to the thiolase family
FIM01_03200	COG2885	chlorophyll binding
FIM01_03200	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FIM01_03205	COG1690	Belongs to the RtcB family
FIM01_03210	COG0833	amino acid
FIM01_03220	COG2233	PERMEase
FIM01_03250	COG2094	Belongs to the DNA glycosylase MPG family
FIM01_03255	COG4772	TonB-dependent receptor
FIM01_03260	COG1902	pentaerythritol trinitrate reductase activity
FIM01_03265	COG0679	Auxin Efflux Carrier
FIM01_03275	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FIM01_03280	COG0354	folic acid binding
FIM01_03290	COG3189	MarR family transcriptional regulator
FIM01_03295	COG2824	Alkylphosphonate utilization operon protein PhnA
FIM01_03300	COG3422	double-strand break repair
FIM01_03340	COG0840	transmembrane signaling receptor activity
FIM01_03355	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FIM01_03370	COG5510	response to toxic substance
FIM01_03380	COG2832	Protein of unknown function (DUF454)
FIM01_03385	COG1376	ErfK ybiS ycfS ynhG family protein
FIM01_03435	COG1289	transmembrane transporter activity
FIM01_03440	COG2814	Major facilitator Superfamily
FIM01_03460	COG1115	amino acid carrier protein
FIM01_03465	COG1752	Esterase of the alpha-beta hydrolase superfamily
FIM01_03470	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FIM01_03475	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FIM01_03500	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FIM01_03510	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FIM01_03515	COG1077	Cell shape determining protein MreB Mrl
FIM01_03520	COG1792	Involved in formation and maintenance of cell shape
FIM01_03525	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FIM01_03530	COG0424	maF-like protein
FIM01_03535	COG1530	ribonuclease E activity
FIM01_03545	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FIM01_03565	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIM01_03590	COG2207	Transcriptional regulator
FIM01_04000	COG0582	viral genome integration into host DNA
FIM01_04005	COG0582	viral genome integration into host DNA
FIM01_04090	COG0305	Participates in initiation and elongation during chromosome replication
FIM01_04310	COG1113	amino acid transport
FIM01_04315	COG2828	Protein conserved in bacteria
FIM01_04320	COG0142	geranyltranstransferase activity
FIM01_04325	COG2315	Protein conserved in bacteria
FIM01_04340	COG1752	Esterase of the alpha-beta hydrolase superfamily
FIM01_04360	COG2194	sulfuric ester hydrolase activity
FIM01_04365	COG0745	RESPONSE REGULATOR receiver
FIM01_04370	COG0642	Histidine kinase
FIM01_04380	COG0004	ammonium transporteR
FIM01_04390	COG0583	DNA-binding transcription factor activity
FIM01_04410	COG0525	valine-tRNA ligase activity
FIM01_04420	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_04430	COG0393	Putative heavy-metal-binding
FIM01_04435	COG0393	Putative heavy-metal-binding
FIM01_04440	COG1538	Outer membrane efflux protein
FIM01_04450	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_04455	COG0671	phosphoesterase, PA-phosphatase related
FIM01_04485	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FIM01_04500	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FIM01_04500	COG1648	precorrin-2 dehydrogenase activity
FIM01_04505	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FIM01_04510	COG1733	regulation of RNA biosynthetic process
FIM01_04520	COG0531	amino acid
FIM01_04535	COG0321	lipoyl(octanoyl) transferase activity
FIM01_04540	COG2921	Belongs to the UPF0250 family
FIM01_04575	COG2009	succinate dehydrogenase
FIM01_04580	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FIM01_04585	COG1053	succinate dehydrogenase
FIM01_04590	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FIM01_04615	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIM01_04650	COG2354	Protein conserved in bacteria
FIM01_04655	COG2321	neutral zinc metallopeptidase
FIM01_04675	COG2843	Capsule synthesis protein
FIM01_04690	COG0589	response to stress
FIM01_04710	COG0505	Belongs to the CarA family
FIM01_04735	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FIM01_04740	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FIM01_04790	COG0477	Major facilitator Superfamily
FIM01_04795	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FIM01_04815	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FIM01_04840	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIM01_04845	COG0584	glycerophosphoryl diester phosphodiesterase
FIM01_04865	COG0741	lytic transglycosylase activity
FIM01_04890	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FIM01_04905	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FIM01_04945	COG0778	Nitroreductase
FIM01_04960	COG1929	Belongs to the glycerate kinase type-1 family
FIM01_04965	COG0243	molybdopterin cofactor binding
FIM01_04970	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FIM01_04975	COG3339	Conserved Protein
FIM01_04985	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
FIM01_05000	COG1113	amino acid transport
FIM01_05010	COG0019	diaminopimelate decarboxylase activity
FIM01_05020	COG2267	carboxylic ester hydrolase activity
FIM01_05025	COG1280	lysine exporter protein (LysE YggA)
FIM01_05030	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FIM01_05060	COG0463	Glycosyl transferase, family 2
FIM01_05080	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_05110	COG4591	ABC-type transport system involved in lipoprotein release permease component
FIM01_05115	COG1136	(ABC) transporter
FIM01_05120	COG0658	competence protein
FIM01_05120	COG2333	competence protein COMEC
FIM01_05130	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FIM01_05130	COG0616	signal peptide processing
FIM01_05135	COG0596	Alpha beta hydrolase
FIM01_05140	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FIM01_05150	COG0628	permease
FIM01_05185	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FIM01_05225	COG0824	Thioesterase
FIM01_05230	COG1473	amidohydrolase
FIM01_05250	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FIM01_05250	COG0047	phosphoribosylformylglycinamidine synthase activity
FIM01_05255	COG2814	Major facilitator Superfamily
FIM01_05260	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FIM01_05265	COG1024	Enoyl-CoA hydratase
FIM01_05270	COG1051	belongs to the nudix hydrolase family
FIM01_05270	COG1056	cytidyltransferase-related domain
FIM01_05280	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FIM01_05295	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FIM01_05310	COG4625	pathogenesis
FIM01_05315	COG0583	DNA-binding transcription factor activity
FIM01_05320	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FIM01_05325	COG4208	sulfate ABC transporter
FIM01_05330	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FIM01_05340	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FIM01_05345	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FIM01_05350	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FIM01_05370	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FIM01_05385	COG0681	Belongs to the peptidase S26 family
FIM01_05400	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FIM01_05410	COG1381	Involved in DNA repair and RecF pathway recombination
FIM01_05415	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FIM01_05425	COG4221	oxidoreductase activity
FIM01_05475	COG0556	nucleotide-excision repair
FIM01_05530	COG2070	2-Nitropropane dioxygenase
FIM01_05575	COG0415	Belongs to the DNA photolyase family
FIM01_05585	COG1252	NADH dehydrogenase
FIM01_05590	COG1686	Belongs to the peptidase S11 family
FIM01_05605	COG1187	pseudouridine synthase activity
FIM01_05630	COG0477	Major facilitator Superfamily
FIM01_05635	COG0583	DNA-binding transcription factor activity
FIM01_05650	COG0612	Peptidase, M16
FIM01_05680	COG1203	CRISPR-associated helicase, Cas3
FIM01_05705	COG0352	thiamine-phosphate diphosphorylase activity
FIM01_05740	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIM01_05755	COG1309	transcriptional regulator
FIM01_05765	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FIM01_05770	COG0076	glutamate decarboxylase activity
FIM01_05780	COG1522	sequence-specific DNA binding
FIM01_05785	COG3961	Belongs to the TPP enzyme family
FIM01_05790	COG1113	amino acid transport
FIM01_05795	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FIM01_05800	COG0573	inorganic phosphate transmembrane transporter activity
FIM01_05810	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FIM01_05815	COG0616	signal peptide processing
FIM01_05850	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FIM01_05855	COG1686	Belongs to the peptidase S11 family
FIM01_05880	COG0583	DNA-binding transcription factor activity
FIM01_05885	COG1067	ATP-dependent peptidase activity
FIM01_05910	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FIM01_05930	COG1966	Carbon starvation protein
FIM01_05935	COG2879	small protein
FIM01_05945	COG0583	DNA-binding transcription factor activity
FIM01_05950	COG0006	proline dipeptidase activity
FIM01_05955	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIM01_05960	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIM01_05975	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIM01_05980	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIM01_05980	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FIM01_06035	COG1741	Belongs to the pirin family
FIM01_06045	COG2964	Protein conserved in bacteria
FIM01_06060	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FIM01_06065	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIM01_06070	COG4605	iron ion homeostasis
FIM01_06075	COG4604	ABC transporter, ATP-binding protein
FIM01_06080	COG4607	ABC-type enterochelin transport system periplasmic component
FIM01_06085	COG4774	siderophore transport
FIM01_06095	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FIM01_06100	COG1021	2,3-dihydroxybenzoate-AMP ligase
FIM01_06105	COG1535	isochorismatase
FIM01_06105	COG3433	isochorismatase activity
FIM01_06120	COG1132	(ABC) transporter
FIM01_06130	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
FIM01_06140	COG1169	isochorismate synthase
FIM01_06155	COG3739	integral membrane protein
FIM01_06190	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FIM01_06220	COG0308	aminopeptidase N
FIM01_06225	COG0512	Glutamine amidotransferase of anthranilate synthase
FIM01_06235	COG3104	oligopeptide transport
FIM01_06250	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FIM01_06285	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FIM01_06290	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FIM01_06295	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FIM01_06315	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FIM01_06320	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FIM01_06325	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FIM01_06340	COG1960	acyl-CoA dehydrogenase activity
FIM01_06345	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FIM01_06350	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIM01_06360	COG2223	nitrite transmembrane transporter activity
FIM01_06370	COG0024	Methionine aminopeptidase
FIM01_06375	COG0052	Belongs to the universal ribosomal protein uS2 family
FIM01_06390	COG2207	Transcriptional regulator
FIM01_06415	COG2951	lytic endotransglycosylase activity
FIM01_06420	COG0772	Belongs to the SEDS family
FIM01_06435	COG0842	Transport permease protein
FIM01_06440	COG1131	(ABC) transporter
FIM01_06445	COG0582	viral genome integration into host DNA
FIM01_06485	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FIM01_06550	COG0305	Participates in initiation and elongation during chromosome replication
FIM01_06645	COG5410	chromosome segregation
FIM01_06770	COG0739	heme binding
FIM01_06865	COG1538	Outer membrane efflux protein
FIM01_06875	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_06890	COG4215	(ABC) transporter
FIM01_06895	COG4160	amino acid transport
FIM01_06910	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FIM01_06920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIM01_06935	COG1720	tRNA m6t6A37 methyltransferase activity
FIM01_06955	COG0745	RESPONSE REGULATOR receiver
FIM01_06960	COG0642	Histidine kinase
FIM01_06970	COG0494	nUDIX hydrolase
FIM01_06980	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FIM01_06985	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FIM01_06990	COG3139	Protein of unknown function (DUF1315)
FIM01_06995	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FIM01_07005	COG1301	dicarboxylic acid transport
FIM01_07010	COG1960	acyl-CoA dehydrogenase activity
FIM01_07015	COG2819	hydrolase of the alpha beta superfamily
FIM01_07025	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FIM01_07035	COG2195	Cleaves the N-terminal amino acid of tripeptides
FIM01_07040	COG1234	tRNA 3'-trailer cleavage
FIM01_07065	COG2363	Small membrane protein
FIM01_07085	COG0513	Belongs to the DEAD box helicase family
FIM01_07095	COG0778	Nitroreductase
FIM01_07190	COG0305	Participates in initiation and elongation during chromosome replication
FIM01_07290	COG5410	chromosome segregation
FIM01_07420	COG0739	heme binding
FIM01_07500	COG1286	toxin biosynthetic process
FIM01_07525	COG4783	chaperone-mediated protein folding
FIM01_07530	COG1610	YqeY-like protein
FIM01_07535	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FIM01_07630	COG3111	PFAM Bacterial OB fold (BOF) protein
FIM01_07655	COG3243	poly(R)-hydroxyalkanoic acid synthase
FIM01_07660	COG0786	glutamate:sodium symporter activity
FIM01_07670	COG0583	DNA-binding transcription factor activity
FIM01_07680	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_07695	COG2186	Transcriptional regulator
FIM01_07755	COG0477	Major facilitator Superfamily
FIM01_07780	COG2995	paraquat-inducible protein a
FIM01_07785	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FIM01_07785	COG3008	intermembrane lipid transfer
FIM01_07795	COG2351	hydroxyisourate hydrolase activity
FIM01_07835	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FIM01_07845	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FIM01_07850	COG0642	Histidine kinase
FIM01_07855	COG0745	RESPONSE REGULATOR receiver
FIM01_07875	COG1794	racemase activity, acting on amino acids and derivatives
FIM01_07905	COG1301	dicarboxylic acid transport
FIM01_07915	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIM01_07920	COG2011	ABC-type metal ion transport system permease component
FIM01_07925	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FIM01_07930	COG1464	Belongs to the NlpA lipoprotein family
FIM01_07935	COG0151	Belongs to the GarS family
FIM01_07940	COG0138	bifunctional purine biosynthesis protein purh
FIM01_07945	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FIM01_07975	COG2308	Evidence 4 Homologs of previously reported genes of
FIM01_07985	COG1305	Transglutaminase-like
FIM01_07995	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FIM01_08000	COG0305	Participates in initiation and elongation during chromosome replication
FIM01_08025	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FIM01_08035	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FIM01_08040	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FIM01_08065	COG0726	polysaccharide deacetylase
FIM01_08065	COG1649	PFAM Uncharacterised BCR, COG1649
FIM01_08070	COG1215	transferase activity, transferring glycosyl groups
FIM01_08075	COG3658	cytochrome
FIM01_08085	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FIM01_08105	COG0583	DNA-binding transcription factor activity
FIM01_08125	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIM01_08130	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIM01_08145	COG1960	acyl-CoA dehydrogenase activity
FIM01_08150	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FIM01_08155	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_08180	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FIM01_08185	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FIM01_08195	COG2205	protein histidine kinase activity
FIM01_08200	COG0745	RESPONSE REGULATOR receiver
FIM01_08205	COG0174	glutamine synthetase
FIM01_08225	COG0729	surface antigen
FIM01_08255	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FIM01_08260	COG2814	Major facilitator Superfamily
FIM01_08275	COG0583	DNA-binding transcription factor activity
FIM01_08290	COG1187	pseudouridine synthase activity
FIM01_08310	COG0802	atpase or kinase
FIM01_08315	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FIM01_08325	COG1923	regulation of RNA biosynthetic process
FIM01_08330	COG0697	spore germination
FIM01_08360	COG0519	Catalyzes the synthesis of GMP from XMP
FIM01_08360	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FIM01_08365	COG4302	ethanolamine ammonia-lyase activity
FIM01_08370	COG4303	Ethanolamine ammonia lyase large subunit
FIM01_08375	COG0531	amino acid
FIM01_08395	COG1454	alcohol dehydrogenase
FIM01_08400	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FIM01_08425	COG0308	aminopeptidase N
FIM01_08465	COG1605	Chorismate mutase
FIM01_08485	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FIM01_08505	COG1309	transcriptional regulator
FIM01_08515	COG0668	transmembrane transport
FIM01_08545	COG4773	Receptor
FIM01_08565	COG0488	(ABC) transporter
FIM01_08570	COG0589	response to stress
FIM01_08585	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FIM01_08600	COG1522	sequence-specific DNA binding
FIM01_08615	COG0583	DNA-binding transcription factor activity
FIM01_08625	COG0183	Belongs to the thiolase family
FIM01_08655	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FIM01_08665	COG0824	Thioesterase
FIM01_08670	COG1454	alcohol dehydrogenase
FIM01_08680	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FIM01_08700	COG0069	glutamate synthase activity
FIM01_08720	COG2814	Major facilitator Superfamily
FIM01_08735	COG0511	ligase activity, forming carbon-carbon bonds
FIM01_08755	COG1116	anion transmembrane transporter activity
FIM01_08755	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIM01_08760	COG0745	RESPONSE REGULATOR receiver
FIM01_08770	COG2146	nitrite reductase [NAD(P)H] activity
FIM01_08770	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIM01_08775	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIM01_08780	COG0243	molybdopterin cofactor binding
FIM01_08790	COG0243	molybdopterin cofactor binding
FIM01_08795	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FIM01_08810	COG0315	cyclic pyranopterin monophosphate synthase activity
FIM01_08810	COG0521	Mo-molybdopterin cofactor biosynthetic process
FIM01_08815	COG0303	'Molybdopterin
FIM01_08830	COG0697	spore germination
FIM01_08850	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FIM01_08855	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FIM01_08915	COG2204	response regulator
FIM01_08920	COG3852	Histidine kinase
FIM01_08945	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FIM01_08950	COG0575	Belongs to the CDS family
FIM01_08985	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FIM01_09000	COG2137	regulation of response to DNA damage stimulus
FIM01_09010	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FIM01_09015	COG1011	Hydrolase
FIM01_09040	COG1522	sequence-specific DNA binding
FIM01_09050	COG1113	amino acid transport
FIM01_09065	COG0659	secondary active sulfate transmembrane transporter activity
FIM01_09070	COG2135	peptidase activity
FIM01_09085	COG5001	Diguanylate cyclase
FIM01_09085	COG3300	MHYT domain
FIM01_09105	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIM01_09105	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIM01_09105	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FIM01_09110	COG1105	Belongs to the carbohydrate kinase PfkB family
FIM01_09115	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FIM01_09115	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIM01_09150	COG0024	Methionine aminopeptidase
FIM01_09155	COG0583	DNA-binding transcription factor activity
FIM01_09165	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FIM01_09170	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FIM01_09175	COG0517	IMP dehydrogenase activity
FIM01_09175	COG0516	GMP reductase activity
FIM01_09200	COG0552	protein localization to endoplasmic reticulum
FIM01_09210	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FIM01_09220	COG4890	Cyd operon protein YbgT
FIM01_09225	COG1294	oxidase, subunit
FIM01_09245	COG1585	Membrane protein implicated in regulation of membrane protease activity
FIM01_09255	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIM01_09260	COG4774	siderophore transport
FIM01_09275	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FIM01_09280	COG0569	domain protein
FIM01_09285	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FIM01_09315	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FIM01_09320	COG0542	response to heat
FIM01_09330	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FIM01_09345	COG1902	pentaerythritol trinitrate reductase activity
FIM01_09345	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIM01_09390	COG2323	membrane
FIM01_09395	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FIM01_09405	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FIM01_09410	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FIM01_09415	COG0183	Belongs to the thiolase family
FIM01_09420	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FIM01_09425	COG0596	Alpha beta hydrolase
FIM01_09430	COG2271	Major facilitator Superfamily
FIM01_09435	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FIM01_09440	COG3485	protocatechuate 3,4-dioxygenase
FIM01_09445	COG3485	protocatechuate 3,4-dioxygenase
FIM01_09450	COG0710	3-dehydroquinate dehydratase activity
FIM01_09455	COG3420	alginic acid biosynthetic process
FIM01_09460	COG3659	wide pore channel activity
FIM01_09465	COG4993	Dehydrogenase
FIM01_09475	COG2391	methyltransferase activity
FIM01_09490	COG1414	Transcriptional regulator
FIM01_09495	COG0583	DNA-binding transcription factor activity
FIM01_09500	COG1960	acyl-CoA dehydrogenase activity
FIM01_09525	COG2814	Major facilitator Superfamily
FIM01_09535	COG0154	amidase activity
FIM01_09555	COG4638	Rieske (2fe-2S)
FIM01_09565	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_09575	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_09585	COG3733	amine oxidase
FIM01_09595	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_09605	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FIM01_09610	COG0183	Belongs to the thiolase family
FIM01_09620	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FIM01_09625	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FIM01_09635	COG4829	muconolactone delta-isomerase
FIM01_09640	COG4948	Mandelate Racemase Muconate Lactonizing
FIM01_09645	COG0583	DNA-binding transcription factor activity
FIM01_09655	COG2186	Transcriptional regulator
FIM01_09675	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_09690	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIM01_09690	COG1902	pentaerythritol trinitrate reductase activity
FIM01_09730	COG1309	transcriptional regulator
FIM01_09740	COG4221	oxidoreductase activity
FIM01_09745	COG4689	acetoacetate decarboxylase
FIM01_09755	COG1902	pentaerythritol trinitrate reductase activity
FIM01_09775	COG1335	isochorismatase
FIM01_09780	COG0583	DNA-binding transcription factor activity
FIM01_09790	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FIM01_09790	COG0475	glutathione-regulated potassium exporter activity
FIM01_09800	COG1473	amidohydrolase
FIM01_09885	COG0583	DNA-binding transcription factor activity
FIM01_09900	COG1566	PFAM secretion protein HlyD family protein
FIM01_09915	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_09920	COG0129	dihydroxy-acid dehydratase activity
FIM01_09930	COG0583	DNA-binding transcription factor activity
FIM01_09935	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FIM01_09945	COG2084	Dehydrogenase
FIM01_09960	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FIM01_10020	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FIM01_10035	COG0556	nucleotide-excision repair
FIM01_10075	COG1073	alpha beta
FIM01_10085	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_10100	COG2207	Transcriptional regulator
FIM01_10110	COG2205	protein histidine kinase activity
FIM01_10115	COG0745	RESPONSE REGULATOR receiver
FIM01_10120	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_10125	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIM01_10130	COG1538	Outer membrane efflux protein
FIM01_10140	COG2072	flavoprotein involved in K transport
FIM01_10150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIM01_10420	COG3539	Fimbrial protein
FIM01_10445	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FIM01_10455	COG0753	catalase activity
FIM01_10470	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FIM01_10535	COG1535	isochorismatase
FIM01_10535	COG3433	isochorismatase activity
FIM01_10540	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_10545	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FIM01_10550	COG4149	molybdate abc transporter
FIM01_10555	COG0725	ABC transporter, periplasmic molybdate-binding protein
FIM01_10565	COG4638	Rieske (2fe-2S)
FIM01_10570	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FIM01_10575	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIM01_10575	COG0543	2 iron, 2 sulfur cluster binding
FIM01_10595	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_10605	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_10610	COG0412	Dienelactone hydrolase
FIM01_10620	COG2207	Transcriptional regulator
FIM01_10625	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_10630	COG2610	gluconate transmembrane transporter activity
FIM01_10640	COG0583	DNA-binding transcription factor activity
FIM01_10655	COG2031	fatty acid transporter
FIM01_10660	COG0183	Belongs to the thiolase family
FIM01_10665	COG0583	DNA-binding transcription factor activity
FIM01_10670	COG0583	DNA-binding transcription factor activity
FIM01_10685	COG1027	Aspartate ammonia-lyase
FIM01_10695	COG0477	Major facilitator Superfamily
FIM01_10715	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIM01_10720	COG4521	taurine ABC transporter
FIM01_10745	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FIM01_10750	COG1733	regulation of RNA biosynthetic process
FIM01_10755	COG3708	Transcriptional regulator
FIM01_10755	COG2207	Transcriptional regulator
FIM01_10770	COG0730	response to heat
FIM01_10780	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIM01_10780	COG3453	Protein conserved in bacteria
FIM01_10790	COG3781	membrane
FIM01_10795	COG1063	alcohol dehydrogenase
FIM01_10805	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIM01_10810	COG0508	dehydrogenase complex catalyzes the overall conversion of
FIM01_10815	COG0022	dehydrogenase e1 component
FIM01_10820	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FIM01_10825	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FIM01_10840	COG3706	GGDEF domain
FIM01_10855	COG0133	tryptophan synthase activity
FIM01_10865	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FIM01_10900	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FIM01_10925	COG2226	methyltransferase
FIM01_10980	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FIM01_10985	COG4773	Receptor
FIM01_11005	COG0730	response to heat
FIM01_11010	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FIM01_11025	COG0406	alpha-ribazole phosphatase activity
FIM01_11030	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FIM01_11045	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIM01_11075	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FIM01_11085	COG4264	IucA IucC family
FIM01_11090	COG4264	IucA IucC family
FIM01_11110	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FIM01_11125	COG1960	acyl-CoA dehydrogenase activity
FIM01_11130	COG1960	acyl-CoA dehydrogenase activity
FIM01_11135	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIM01_11140	COG2207	Transcriptional regulator
FIM01_11145	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FIM01_11150	COG0776	regulation of translation
FIM01_11175	COG0822	iron-sulfur transferase activity
FIM01_11180	COG0316	Belongs to the HesB IscA family
FIM01_11210	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FIM01_11230	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FIM01_11235	COG0702	epimerase
FIM01_11270	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FIM01_11280	COG0339	signal peptide processing
FIM01_11300	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FIM01_11325	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FIM01_11330	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FIM01_11360	COG0776	regulation of translation
FIM01_11380	COG0590	tRNA wobble adenosine to inosine editing
FIM01_11425	COG0084	hydrolase, TatD family'
FIM01_11445	COG1663	tetraacyldisaccharide 4'-kinase activity
FIM01_11450	COG1132	(ABC) transporter
FIM01_11460	COG0811	peptide transport
FIM01_11465	COG1475	DNA binding
FIM01_11470	COG1192	Involved in chromosome partitioning
FIM01_11480	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FIM01_11495	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FIM01_11500	COG0191	fructose-bisphosphate aldolase activity
FIM01_11520	COG0424	maF-like protein
FIM01_11525	COG2850	peptidyl-arginine hydroxylation
FIM01_11535	COG0640	Transcriptional regulator
FIM01_11545	COG3619	membrane
FIM01_11550	COG3122	Protein conserved in bacteria
FIM01_11555	COG1132	(ABC) transporter
FIM01_11575	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FIM01_11580	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FIM01_11590	COG0506	proline dehydrogenase activity
FIM01_11590	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FIM01_11590	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FIM01_11595	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FIM01_11610	COG3698	Phosphodiester glycosidase
FIM01_11620	COG2353	YceI-like domain
FIM01_11630	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FIM01_11675	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FIM01_11675	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FIM01_11700	COG3539	Fimbrial protein
FIM01_11705	COG3121	Chaperone
FIM01_11735	COG0697	spore germination
FIM01_11745	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FIM01_11755	COG0583	DNA-binding transcription factor activity
FIM01_11775	COG1309	transcriptional regulator
FIM01_11790	COG1522	sequence-specific DNA binding
FIM01_11800	COG1126	abc transporter atp-binding protein
FIM01_11805	COG0765	amino acid transport
FIM01_11810	COG0765	amino acid transport
FIM01_11840	COG1464	Belongs to the NlpA lipoprotein family
FIM01_11850	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FIM01_11855	COG2011	ABC-type metal ion transport system permease component
FIM01_11860	COG0012	GTP binding
FIM01_11885	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FIM01_11925	COG0386	Belongs to the glutathione peroxidase family
FIM01_11935	COG0436	Aminotransferase
FIM01_11940	COG1301	dicarboxylic acid transport
FIM01_11975	COG3634	alkyl hydroperoxide reductase activity
FIM01_11990	COG0583	DNA-binding transcription factor activity
FIM01_11995	COG0798	PFAM Bile acid sodium symporter
FIM01_12000	COG0640	Transcriptional regulator
FIM01_12015	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FIM01_12025	COG0583	DNA-binding transcription factor activity
FIM01_12035	COG1953	Uracil, thiamine, allantoin
FIM01_12045	COG2175	clavaminate synthase activity
FIM01_12050	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIM01_12055	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FIM01_12060	COG4521	taurine ABC transporter
FIM01_12070	COG0477	Major facilitator Superfamily
FIM01_12095	COG1271	oxidase subunit
FIM01_12100	COG1294	oxidase, subunit
FIM01_12110	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIM01_12130	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FIM01_12150	COG3052	prosthetic group binding
FIM01_12155	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
FIM01_12165	COG2814	Major facilitator Superfamily
FIM01_12180	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIM01_12185	COG1346	cytolysis
FIM01_12195	COG0583	DNA-binding transcription factor activity
FIM01_12200	COG0625	glutathione transferase activity
FIM01_12205	COG0625	glutathione transferase activity
FIM01_12210	COG0583	DNA-binding transcription factor activity
FIM01_12225	COG1045	serine acetyltransferase
FIM01_12230	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FIM01_12235	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FIM01_12240	COG1280	lysine exporter protein (LysE YggA)
FIM01_12250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIM01_12255	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIM01_12260	COG1126	abc transporter atp-binding protein
FIM01_12265	COG0765	amino acid transport
FIM01_12270	COG0765	amino acid transport
FIM01_12290	COG0784	Response regulator, receiver
FIM01_12290	COG2205	protein histidine kinase activity
FIM01_12330	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_12375	COG0583	DNA-binding transcription factor activity
FIM01_12395	COG0318	PFAM AMP-dependent synthetase and ligase
FIM01_12400	COG1309	transcriptional regulator
FIM01_12405	COG1960	acyl-CoA dehydrogenase activity
FIM01_12410	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FIM01_12415	COG1024	Enoyl-CoA hydratase
FIM01_12430	COG0583	DNA-binding transcription factor activity
FIM01_12445	COG1960	acyl-CoA dehydrogenase activity
FIM01_12455	COG2814	Major facilitator Superfamily
FIM01_12465	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FIM01_12470	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FIM01_12475	COG2814	Major facilitator Superfamily
FIM01_12480	COG1960	acyl-CoA dehydrogenase activity
FIM01_12485	COG1024	Enoyl-CoA hydratase
FIM01_12490	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_12495	COG1250	3-hydroxyacyl-CoA dehydrogenase
FIM01_12500	COG0183	Belongs to the thiolase family
FIM01_12510	COG2814	Major facilitator Superfamily
FIM01_12520	COG1024	Enoyl-CoA hydratase
FIM01_12530	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FIM01_12535	COG1960	acyl-CoA dehydrogenase activity
FIM01_12540	COG2814	Major facilitator Superfamily
FIM01_12545	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIM01_12550	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FIM01_12565	COG3842	ATPase activity
FIM01_12570	COG1840	ABC-type Fe3 transport system, periplasmic component
FIM01_12580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIM01_12585	COG1414	Transcriptional regulator
FIM01_12595	COG0583	DNA-binding transcription factor activity
FIM01_12600	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FIM01_12605	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_12615	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FIM01_12625	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_12630	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FIM01_12635	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_12640	COG2267	carboxylic ester hydrolase activity
FIM01_12660	COG3038	cytochrome b561
FIM01_12665	COG0753	catalase activity
FIM01_12670	COG2271	Major facilitator Superfamily
FIM01_12675	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FIM01_12680	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FIM01_12710	COG1278	Cold shock
FIM01_12750	COG0210	DNA helicase
FIM01_12755	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FIM01_12760	COG2050	protein possibly involved in aromatic compounds catabolism
FIM01_12770	COG3327	negative regulation of DNA-templated transcription, initiation
FIM01_12775	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
FIM01_12780	COG0183	Belongs to the thiolase family
FIM01_12785	COG1250	3-hydroxyacyl-CoA dehydrogenase
FIM01_12790	COG1024	Enoyl-CoA hydratase
FIM01_12795	COG1024	Enoyl-CoA hydratase
FIM01_12800	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIM01_12805	COG2151	metal-sulfur cluster biosynthetic enzyme
FIM01_12810	COG3396	Phenylacetate-CoA oxygenase
FIM01_12815	COG3460	Phenylacetate-CoA oxygenase
FIM01_12820	COG3396	Phenylacetate-CoA oxygenase
FIM01_12825	COG2030	dehydratase
FIM01_12825	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_12830	COG1760	l-serine dehydratase
FIM01_12835	COG0531	amino acid
FIM01_12840	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_12865	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIM01_12885	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FIM01_12900	COG0789	Transcriptional regulator
FIM01_12910	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FIM01_12925	COG2807	transmembrane transport
FIM01_12930	COG0590	tRNA wobble adenosine to inosine editing
FIM01_12940	COG0583	DNA-binding transcription factor activity
FIM01_12980	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FIM01_12980	COG2885	chlorophyll binding
FIM01_13050	COG1116	anion transmembrane transporter activity
FIM01_13055	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIM01_13065	COG0864	Transcriptional regulator
FIM01_13075	COG1733	regulation of RNA biosynthetic process
FIM01_13080	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIM01_13085	COG0439	Biotin carboxylase
FIM01_13100	COG1063	alcohol dehydrogenase
FIM01_13110	COG1309	transcriptional regulator
FIM01_13140	COG0038	chloride channel
FIM01_13145	COG4770	biotin carboxylase activity
FIM01_13165	COG1914	H( )-stimulated, divalent metal cation uptake system
FIM01_13170	COG0583	DNA-binding transcription factor activity
FIM01_13190	COG3209	COG3209 Rhs family protein
FIM01_13205	COG3209	COG3209 Rhs family protein
FIM01_13210	COG3501	Rhs element vgr protein
FIM01_13240	COG1250	3-hydroxyacyl-CoA dehydrogenase
FIM01_13260	COG2814	Major facilitator Superfamily
FIM01_13275	COG1560	Kdo2-lipid A biosynthetic process
FIM01_13285	COG5006	permease, DMT superfamily
FIM01_13290	COG1522	sequence-specific DNA binding
FIM01_13305	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FIM01_13350	COG1137	ATPase activity
FIM01_13355	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FIM01_13365	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FIM01_13425	COG5434	Belongs to the glycosyl hydrolase 28 family
FIM01_13465	COG5410	chromosome segregation
FIM01_13535	COG1733	regulation of RNA biosynthetic process
FIM01_13540	COG2814	Major facilitator Superfamily
FIM01_13580	COG1278	Cold shock
FIM01_13585	COG1280	lysine exporter protein (LysE YggA)
FIM01_13620	COG1570	exodeoxyribonuclease VII activity
FIM01_13675	COG0583	DNA-binding transcription factor activity
FIM01_13680	COG4638	Rieske (2fe-2S)
FIM01_13685	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FIM01_13690	COG0633	Ferredoxin
FIM01_13690	COG0543	2 iron, 2 sulfur cluster binding
FIM01_13695	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_13700	COG3135	benzoate transporter
FIM01_13705	COG2814	Major facilitator Superfamily
FIM01_13720	COG1643	Atp-dependent helicase
FIM01_13725	COG0450	alkyl hydroperoxide reductase
FIM01_13735	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FIM01_13745	COG3634	alkyl hydroperoxide reductase activity
FIM01_13765	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FIM01_13770	COG0625	glutathione transferase activity
FIM01_13780	COG2885	chlorophyll binding
FIM01_13830	COG1765	OsmC-like protein
FIM01_13840	COG0667	Aldo Keto reductase
FIM01_13855	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FIM01_13865	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FIM01_13885	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FIM01_13895	COG3038	cytochrome b561
FIM01_13900	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FIM01_13905	COG2252	PERMEase
FIM01_13915	COG2072	flavoprotein involved in K transport
FIM01_13930	COG1741	Belongs to the pirin family
FIM01_13935	COG1309	transcriptional regulator
FIM01_13945	COG0300	oxidoreductase activity
FIM01_13950	COG2072	flavoprotein involved in K transport
FIM01_13955	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FIM01_14000	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIM01_14015	COG2814	Major facilitator Superfamily
FIM01_14020	COG1024	Enoyl-CoA hydratase
FIM01_14025	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_14035	COG1960	acyl-CoA dehydrogenase activity
FIM01_14060	COG2186	Transcriptional regulator
FIM01_14065	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_14075	COG4948	Mandelate Racemase Muconate Lactonizing
FIM01_14080	COG2271	Major facilitator Superfamily
FIM01_14085	COG2721	sulfolactate sulfo-lyase activity
FIM01_14090	COG0697	spore germination
FIM01_14120	COG1113	amino acid transport
FIM01_14140	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_14160	COG0531	amino acid
FIM01_14170	COG1113	amino acid transport
FIM01_14210	COG3209	COG3209 Rhs family protein
FIM01_14255	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIM01_14255	COG1902	pentaerythritol trinitrate reductase activity
FIM01_14265	COG3706	GGDEF domain
FIM01_14265	COG5001	Diguanylate cyclase
FIM01_14265	COG2203	Gaf domain
FIM01_14265	COG4251	negative regulation of phosphorylation
FIM01_14275	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FIM01_14330	COG4172	Belongs to the ABC transporter superfamily
FIM01_14335	COG4239	(ABC) transporter, permease
FIM01_14340	COG4174	ABC transporter (Permease)
FIM01_14350	COG0741	lytic transglycosylase activity
FIM01_14350	COG1388	LysM domain
FIM01_14350	COG1388	LysM domain
FIM01_14350	COG0741	lytic transglycosylase activity
FIM01_14355	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FIM01_14395	COG0583	DNA-binding transcription factor activity
FIM01_14400	COG1279	arginine transmembrane transporter activity
FIM01_14420	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIM01_14425	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIM01_14430	COG0006	proline dipeptidase activity
FIM01_14470	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FIM01_14490	COG3384	dioxygenase
FIM01_14500	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FIM01_14505	COG2878	Part of a membrane complex involved in electron transport
FIM01_14510	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FIM01_14535	COG0768	penicillin binding
FIM01_14540	COG0742	ribosomal rna small subunit methyltransferase
FIM01_14555	COG0830	nickel cation binding
FIM01_14565	COG0804	urea catabolic process
FIM01_14605	COG1253	flavin adenine dinucleotide binding
FIM01_14615	COG2851	Citrate transporter
FIM01_14665	COG1773	rubredoxin
FIM01_14670	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIM01_14680	COG0583	DNA-binding transcription factor activity
FIM01_14710	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FIM01_14715	COG4181	ATPase activity
FIM01_14760	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FIM01_14780	COG0306	phosphate transporter
FIM01_14790	COG3958	Transketolase
FIM01_14795	COG3959	Transketolase, thiamine diphosphate binding domain
FIM01_14800	COG2271	Major facilitator Superfamily
FIM01_14805	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_14810	COG0583	DNA-binding transcription factor activity
FIM01_14830	COG2223	nitrite transmembrane transporter activity
FIM01_14835	COG2207	Transcriptional regulator
FIM01_14840	COG2066	Belongs to the glutaminase family
FIM01_14845	COG0242	peptide deformylase activity
FIM01_14850	COG0477	Major facilitator Superfamily
FIM01_14860	COG0028	Belongs to the TPP enzyme family
FIM01_14875	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_14880	COG2267	carboxylic ester hydrolase activity
FIM01_14890	COG2271	Major facilitator Superfamily
FIM01_14895	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIM01_14905	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_14925	COG1414	Transcriptional regulator
FIM01_14940	COG1024	Enoyl-CoA hydratase
FIM01_14950	COG1215	transferase activity, transferring glycosyl groups
FIM01_14955	COG1649	PFAM Uncharacterised BCR, COG1649
FIM01_14955	COG0726	polysaccharide deacetylase
FIM01_14965	COG4681	YaeQ
FIM01_14975	COG0523	cobalamin synthesis protein
FIM01_14985	COG1607	acyl-coa hydrolase
FIM01_14995	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIM01_15000	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIM01_15005	COG1309	transcriptional regulator
FIM01_15030	COG2040	homocysteine
FIM01_15035	COG0531	amino acid
FIM01_15090	COG1595	DNA-templated transcription, initiation
FIM01_15100	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FIM01_15105	COG0477	Major facilitator Superfamily
FIM01_15125	COG0084	hydrolase, TatD family'
FIM01_15215	COG0582	viral genome integration into host DNA
FIM01_15235	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FIM01_15305	COG0592	DNA-directed DNA polymerase activity
FIM01_15475	COG3755	Protein conserved in bacteria
FIM01_15520	COG1484	DNA-dependent DNA replication
FIM01_15610	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FIM01_15675	COG0405	Gamma-glutamyltransferase
FIM01_15680	COG2814	Major facilitator Superfamily
FIM01_15690	COG2050	protein possibly involved in aromatic compounds catabolism
FIM01_15705	COG1090	epimerase
FIM01_15725	COG0420	3'-5' exonuclease activity
FIM01_15750	COG0735	belongs to the Fur family
FIM01_15755	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FIM01_15780	COG0121	glutamine amidotransferase
FIM01_15795	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FIM01_15805	COG0210	DNA helicase
FIM01_15810	COG2885	chlorophyll binding
FIM01_15815	COG0204	Acyl-transferase
FIM01_15830	COG2894	cell division
FIM01_15845	COG1280	lysine exporter protein (LysE YggA)
FIM01_15850	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FIM01_15850	COG1674	ftsk spoiiie
FIM01_15855	COG0492	ferredoxin-NADP+ reductase activity
FIM01_15860	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FIM01_15880	COG0456	acetyltransferase
FIM01_15940	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FIM01_15940	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FIM01_15960	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_15980	COG0473	3-isopropylmalate dehydrogenase activity
FIM01_15985	COG0583	DNA-binding transcription factor activity
FIM01_16005	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FIM01_16030	COG0564	pseudouridine synthase activity
FIM01_16040	COG0358	DNA primase activity
FIM01_16055	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FIM01_16085	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FIM01_16115	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FIM01_16125	COG0351	phosphomethylpyrimidine kinase
FIM01_16125	COG0352	thiamine-phosphate diphosphorylase activity
FIM01_16125	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FIM01_16130	COG1652	LysM domain
FIM01_16155	COG1399	metal-binding, possibly nucleic acid-binding protein
FIM01_16160	COG3101	peptidyl-lysine hydroxylation
FIM01_16165	COG0009	L-threonylcarbamoyladenylate synthase
FIM01_16170	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FIM01_16175	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FIM01_16190	COG4106	trans-aconitate 2-methyltransferase activity
FIM01_16205	COG0596	Alpha beta hydrolase
FIM01_16205	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FIM01_16205	COG2226	methyltransferase
FIM01_16210	COG1877	trehalose-phosphatase activity
FIM01_16215	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
FIM01_16220	COG2223	nitrite transmembrane transporter activity
FIM01_16240	COG1196	nuclear chromosome segregation
FIM01_16250	COG0730	response to heat
FIM01_16265	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FIM01_16275	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FIM01_16335	COG0489	protein tyrosine kinase activity
FIM01_16345	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIM01_16345	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIM01_16375	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FIM01_16380	COG2081	HI0933 family
FIM01_16390	COG0668	transmembrane transport
FIM01_16410	COG0583	DNA-binding transcription factor activity
FIM01_16435	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FIM01_16440	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FIM01_16470	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FIM01_16505	COG2205	protein histidine kinase activity
FIM01_16510	COG0745	RESPONSE REGULATOR receiver
FIM01_16530	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FIM01_16540	COG0384	phenazine biosynthesis protein PhzF
FIM01_16570	COG1309	transcriptional regulator
FIM01_16590	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIM01_16595	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FIM01_16605	COG0583	DNA-binding transcription factor activity
FIM01_16625	COG1473	amidohydrolase
FIM01_16635	COG0583	DNA-binding transcription factor activity
FIM01_16655	COG0583	DNA-binding transcription factor activity
FIM01_16660	COG1053	succinate dehydrogenase
FIM01_16670	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FIM01_16675	COG2814	Major facilitator Superfamily
FIM01_16680	COG1960	acyl-CoA dehydrogenase activity
FIM01_16685	COG0583	DNA-binding transcription factor activity
FIM01_16690	COG1063	alcohol dehydrogenase
FIM01_16725	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FIM01_16730	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FIM01_16735	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FIM01_16750	COG3667	copper resistance
FIM01_16755	COG2132	Multicopper oxidase
FIM01_16765	COG0561	phosphatase activity
FIM01_16770	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FIM01_16780	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FIM01_16795	COG1214	PFAM Peptidase M22, glycoprotease
FIM01_16845	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FIM01_16855	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FIM01_16860	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FIM01_16865	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FIM01_16925	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FIM01_16935	COG1846	Transcriptional regulator
FIM01_16940	COG1764	response to oxidative stress
FIM01_16980	COG0037	tRNA processing
FIM01_16990	COG0248	Ppx GppA phosphatase
FIM01_17020	COG0072	phenylalanine-tRNA ligase activity
FIM01_17040	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FIM01_17055	COG1238	metal cluster binding
FIM01_17060	COG0625	glutathione transferase activity
FIM01_17075	COG0318	PFAM AMP-dependent synthetase and ligase
FIM01_17080	COG3028	Belongs to the UPF0307 family
FIM01_17085	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIM01_17105	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FIM01_17110	COG0617	tRNA 3'-terminal CCA addition
FIM01_17115	COG1555	photosystem II stabilization
FIM01_17120	COG3956	TIGRFAM MazG family protein
FIM01_17130	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FIM01_17150	COG2205	protein histidine kinase activity
FIM01_17150	COG5002	protein histidine kinase activity
FIM01_17150	COG0784	Response regulator, receiver
FIM01_17155	COG1024	Enoyl-CoA hydratase
FIM01_17160	COG2084	Dehydrogenase
FIM01_17165	COG3622	Belongs to the hyi family
FIM01_17180	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FIM01_17185	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FIM01_17190	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FIM01_17195	COG0697	spore germination
FIM01_17205	COG2814	Major facilitator Superfamily
FIM01_17225	COG2132	Multicopper oxidase
FIM01_17240	COG2205	protein histidine kinase activity
FIM01_17330	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FIM01_17340	COG0583	DNA-binding transcription factor activity
FIM01_17350	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FIM01_17360	COG0084	hydrolase, TatD family'
FIM01_17375	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FIM01_17410	COG0440	acetolactate synthase activity
FIM01_17415	COG0028	Belongs to the TPP enzyme family
FIM01_17440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIM01_17445	COG1136	(ABC) transporter
FIM01_17445	COG0577	efflux transmembrane transporter activity
FIM01_17450	COG1538	Outer membrane efflux protein
FIM01_17465	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FIM01_17470	COG1162	GTPase activity
FIM01_17480	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FIM01_17520	COG1426	Protein conserved in bacteria
FIM01_17555	COG0793	Belongs to the peptidase S41A family
FIM01_17570	COG2267	carboxylic ester hydrolase activity
FIM01_17580	COG1012	belongs to the aldehyde dehydrogenase family
FIM01_17585	COG3265	gluconokinase activity
FIM01_17595	COG0800	Aldolase
FIM01_17605	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FIM01_17610	COG0280	phosphate acetyltransferase
FIM01_17610	COG0857	belongs to the CobB CobQ family
FIM01_17615	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FIM01_17615	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FIM01_17635	COG0740	serine-type endopeptidase activity
FIM01_17645	COG4774	siderophore transport
FIM01_17655	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FIM01_17665	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FIM01_17665	COG2813	Specifically methylates the guanine in position
FIM01_17765	COG0788	formyltetrahydrofolate deformylase activity
FIM01_17780	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FIM01_17785	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FIM01_17790	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FIM01_17790	COG4651	solute:proton antiporter activity
FIM01_17810	COG0724	RNA recognition motif
FIM01_17815	COG0210	DNA helicase
FIM01_17840	COG1733	regulation of RNA biosynthetic process
FIM01_17860	COG1280	lysine exporter protein (LysE YggA)
FIM01_17865	COG1560	Kdo2-lipid A biosynthetic process
FIM01_17875	COG1301	dicarboxylic acid transport
FIM01_17930	COG0473	3-isopropylmalate dehydrogenase activity
FIM01_17985	COG0583	DNA-binding transcription factor activity
FIM01_17995	COG0625	glutathione transferase activity
FIM01_18000	COG2378	regulation of single-species biofilm formation
FIM01_18005	COG0546	phosphoglycolate phosphatase activity
FIM01_18020	COG1530	ribonuclease E activity
FIM01_18040	COG0583	DNA-binding transcription factor activity
FIM01_18045	COG4221	oxidoreductase activity
FIM01_18050	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FIM01_18060	COG0534	Mate efflux family protein
FIM01_18075	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FIM01_18110	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FIM01_18115	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIM01_18130	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FIM01_18140	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FIM01_18140	COG0644	oxidoreductase
FIM01_18150	COG0425	Belongs to the sulfur carrier protein TusA family
FIM01_18155	COG4535	Mg2 and Co2 transporter CorC
FIM01_18165	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIM01_18185	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FIM01_18190	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FIM01_18190	COG0475	glutathione-regulated potassium exporter activity
FIM01_18205	COG0484	heat shock protein binding
FIM01_18210	COG0789	Transcriptional regulator
FIM01_18215	COG0598	Magnesium transport protein CorA
FIM01_18235	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FIM01_18240	COG1074	ATP-dependent DNA helicase activity
FIM01_18245	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FIM01_18265	COG2226	methyltransferase
FIM01_18280	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIM01_18285	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FIM01_18300	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FIM01_18300	COG2111	Na H antiporter
FIM01_18305	COG1006	Multisubunit Na H antiporter MnhC subunit
FIM01_18310	COG0651	ATP synthesis coupled electron transport
FIM01_18320	COG2212	antiporter activity
FIM01_18340	COG0195	Participates in both transcription termination and antitermination
FIM01_18390	COG0237	dephospho-CoA kinase activity
FIM01_18400	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FIM01_18415	COG0497	DNA recombination
FIM01_18425	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FIM01_18455	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FIM01_18455	COG2169	Transcriptional regulator
FIM01_18460	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FIM01_18520	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FIM01_18535	COG0326	Molecular chaperone. Has ATPase activity
FIM01_18555	COG2056	Na+-H+ antiporter family
FIM01_18655	COG0546	phosphoglycolate phosphatase activity
FIM01_18660	COG1716	ATPase activity
FIM01_18705	COG0181	hydroxymethylbilane synthase activity
FIM01_18715	COG3275	phosphorelay sensor kinase activity
FIM01_18735	COG1538	Outer membrane efflux protein
FIM01_18740	COG0697	spore germination
FIM01_18765	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FIM01_18770	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FIM01_18775	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FIM01_18780	COG0772	Belongs to the SEDS family
FIM01_18805	COG4974	Belongs to the 'phage' integrase family
FIM01_18810	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FIM01_18820	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FIM01_18830	COG2197	response regulator
FIM01_18845	COG0793	Belongs to the peptidase S41A family
FIM01_18850	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FIM01_18855	COG0795	lipopolysaccharide-transporting ATPase activity
FIM01_18895	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FIM01_18895	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FIM01_18905	COG0004	ammonium transporteR
FIM01_18910	COG0347	Belongs to the P(II) protein family
FIM01_18920	COG0606	chelatase, subunit chli
FIM01_18930	COG0659	secondary active sulfate transmembrane transporter activity
FIM01_18960	COG0789	Transcriptional regulator
FIM01_19040	COG3316	Transposase and inactivated derivatives
FIM01_19060	COG0697	spore germination
FIM01_19080	COG0789	Transcriptional regulator
FIM01_19135	COG3316	Transposase and inactivated derivatives
FIM01_19180	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FIM01_19210	COG0789	Transcriptional regulator
FIM01_19225	COG0640	Transcriptional regulator
FIM01_19235	COG0798	PFAM Bile acid sodium symporter
FIM01_19240	COG0431	NADPH-dependent FMN reductase
FIM01_19245	COG0492	ferredoxin-NADP+ reductase activity
FIM01_19250	COG2072	flavoprotein involved in K transport
FIM01_19280	COG0606	chelatase, subunit chli
FIM01_19285	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIM01_19295	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FIM01_19310	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FIM01_19325	COG0318	PFAM AMP-dependent synthetase and ligase
FIM01_19335	COG0477	Major facilitator Superfamily
FIM01_19340	COG2860	membrane
FIM01_19345	COG3012	SEC-C Motif Domain Protein
FIM01_19350	COG1253	flavin adenine dinucleotide binding
FIM01_19360	COG2814	Major facilitator Superfamily
FIM01_19370	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FIM01_19405	COG0655	NAD(P)H dehydrogenase (quinone) activity
FIM01_19415	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FIM01_19450	COG1309	transcriptional regulator
FIM01_19485	COG0758	DNA mediated transformation
FIM01_19495	COG0697	spore germination
FIM01_19500	COG1309	transcriptional regulator
FIM01_19515	COG0386	Belongs to the glutathione peroxidase family
FIM01_19580	COG1121	(ABC) transporter
FIM01_19585	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FIM01_19590	COG1280	lysine exporter protein (LysE YggA)
FIM01_19595	COG2837	iron assimilation
FIM01_19600	COG0281	malic enzyme
FIM01_19645	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FIM01_19645	COG0519	Catalyzes the synthesis of GMP from XMP
FIM01_19650	COG4399	Belongs to the UPF0754 family
FIM01_19655	COG2259	Doxx family
FIM01_19660	COG0586	Pfam SNARE associated Golgi protein
FIM01_19675	COG1192	Involved in chromosome partitioning
FIM01_19685	COG0271	Belongs to the BolA IbaG family
FIM01_19705	COG2267	carboxylic ester hydrolase activity
FIM01_19725	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FIM01_19725	COG3321	synthase
FIM01_19725	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FIM01_19725	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FIM01_19730	COG1960	acyl-CoA dehydrogenase activity
FIM01_19740	COG2197	response regulator
FIM01_19750	COG3916	Acyl-homoserine-lactone synthase
FIM01_19755	COG0477	Major facilitator Superfamily
FIM01_19760	COG1024	Enoyl-CoA hydratase
FIM01_19765	COG1024	Enoyl-CoA hydratase
FIM01_19770	COG1960	acyl-CoA dehydrogenase activity
FIM01_19775	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FIM01_19795	COG1113	amino acid transport
FIM01_19800	COG1113	amino acid transport
FIM01_19805	COG0251	oxidation-reduction process
FIM01_19820	COG1522	sequence-specific DNA binding
FIM01_19845	COG0564	pseudouridine synthase activity
FIM01_19895	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FIM01_19910	COG1802	Transcriptional regulator
FIM01_19915	COG1448	Aminotransferase
FIM01_19920	COG0277	FAD linked oxidase domain protein
FIM01_19930	COG2186	Transcriptional regulator
FIM01_19940	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FIM01_19955	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FIM01_19965	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FIM01_19975	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FIM01_19980	COG0438	transferase activity, transferring glycosyl groups
FIM01_19990	COG0438	transferase activity, transferring glycosyl groups
FIM01_20010	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FIM01_20040	COG0728	peptidoglycan biosynthetic process
FIM01_20045	COG3023	N-Acetylmuramoyl-L-alanine amidase
FIM01_20100	COG0546	phosphoglycolate phosphatase activity
FIM01_20105	COG1028	Short-chain dehydrogenase reductase Sdr
FIM01_20125	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIM01_20130	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIM01_20135	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FIM01_20140	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIM01_20145	COG1116	anion transmembrane transporter activity
FIM01_20150	COG1309	transcriptional regulator
FIM01_20155	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FIM01_20170	COG0196	riboflavin kinase activity
FIM01_20175	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FIM01_20185	COG1047	Peptidyl-prolyl cis-trans
FIM01_20225	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FIM01_20280	COG2951	lytic endotransglycosylase activity
FIM01_20285	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FIM01_20305	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FIM01_20315	COG0671	phosphoesterase, PA-phosphatase related
FIM01_20325	COG0861	Integral membrane protein TerC family
FIM01_20335	COG0754	glutathionylspermidine amidase activity
FIM01_20345	COG0402	S-adenosylhomocysteine deaminase activity
FIM01_20360	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FIM01_20365	COG1230	cation diffusion facilitator family transporter
FIM01_20380	COG0706	membrane insertase activity
FIM01_20395	COG0230	Belongs to the bacterial ribosomal protein bL34 family