locus-tag class description OIO43_00005 PF00308 Bacterial dnaA protein OIO43_00005 PF08299 Bacterial dnaA protein helix-turn-helix OIO43_00005 PF11638 DnaA N-terminal domain OIO43_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain OIO43_00010 PF02767 DNA polymerase III beta subunit, central domain OIO43_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain OIO43_00015 PF02463 RecF/RecN/SMC N terminal domain OIO43_00020 PF01751 Toprim domain OIO43_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_00020 PF00986 DNA gyrase B subunit, carboxyl terminus OIO43_00020 PF00204 DNA gyrase B OIO43_00020 PF18053 DNA gyrase B subunit insert domain OIO43_00030 PF09335 SNARE associated Golgi protein OIO43_00035 PF12848 ABC transporter OIO43_00035 PF00005 ABC transporter OIO43_00055 PF01521 Iron-sulphur cluster biosynthesis OIO43_00060 PF00561 alpha/beta hydrolase fold OIO43_00065 PF03702 Anhydro-N-acetylmuramic acid kinase OIO43_00070 PF00579 tRNA synthetases class I (W and Y) OIO43_00110 PF00209 Sodium:neurotransmitter symporter family OIO43_00120 PF01189 16S rRNA methyltransferase RsmB/F OIO43_00120 PF01029 NusB family OIO43_00125 PF02911 Formyl transferase, C-terminal domain OIO43_00125 PF00551 Formyl transferase OIO43_00130 PF00920 Dehydratase family OIO43_00145 PF03466 LysR substrate binding domain OIO43_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_00150 PF00860 Permease family OIO43_00155 PF00311 Phosphoenolpyruvate carboxylase OIO43_00160 PF00440 Bacterial regulatory proteins, tetR family OIO43_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region OIO43_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO43_00170 PF00873 AcrB/AcrD/AcrF family OIO43_00180 PF00684 DnaJ central domain OIO43_00180 PF01556 DnaJ C terminal domain OIO43_00180 PF00226 DnaJ domain OIO43_00190 PF05173 Dihydrodipicolinate reductase, C-terminus OIO43_00190 PF01113 Dihydrodipicolinate reductase, N-terminus OIO43_00200 PF07690 Major Facilitator Superfamily OIO43_00205 PF00248 Aldo/keto reductase family OIO43_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_00210 PF03466 LysR substrate binding domain OIO43_00225 PF00392 Bacterial regulatory proteins, gntR family OIO43_00225 PF00155 Aminotransferase class I and II OIO43_00230 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_00230 PF00107 Zinc-binding dehydrogenase OIO43_00235 PF03352 Methyladenine glycosylase OIO43_00250 PF14815 NUDIX domain OIO43_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein OIO43_00250 PF00633 Helix-hairpin-helix motif OIO43_00250 PF10576 Iron-sulfur binding domain of endonuclease III OIO43_00265 PF07043 Protein of unknown function (DUF1328) OIO43_00270 PF03692 Putative zinc- or iron-chelating domain OIO43_00275 PF07995 Glucose / Sorbosone dehydrogenase OIO43_00280 PF12002 MgsA AAA+ ATPase C terminal OIO43_00280 PF16193 AAA C-terminal domain OIO43_00280 PF00004 ATPase family associated with various cellular activities (AAA) OIO43_00285 PF01226 Formate/nitrite transporter OIO43_00295 PF01259 SAICAR synthetase OIO43_00305 PF00701 Dihydrodipicolinate synthetase family OIO43_00310 PF00857 Isochorismatase family OIO43_00315 PF01758 Sodium Bile acid symporter family OIO43_00320 PF01554 MatE OIO43_00325 PF04463 Protein of unknown function (DUF523) OIO43_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OIO43_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OIO43_00345 PF02798 Glutathione S-transferase, N-terminal domain OIO43_00345 PF14497 Glutathione S-transferase, C-terminal domain OIO43_00355 PF00324 Amino acid permease OIO43_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain OIO43_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain OIO43_00375 PF07702 UTRA domain OIO43_00375 PF00392 Bacterial regulatory proteins, gntR family OIO43_00380 PF05962 HutD OIO43_00385 PF17392 Urocanase C-terminal domain OIO43_00385 PF17391 Urocanase N-terminal domain OIO43_00385 PF01175 Urocanase Rossmann-like domain OIO43_00390 PF00221 Aromatic amino acid lyase OIO43_00395 PF00324 Amino acid permease OIO43_00400 PF01979 Amidohydrolase family OIO43_00405 PF00491 Arginase family OIO43_00420 PF01177 Asp/Glu/Hydantoin racemase OIO43_00425 PF01380 SIS domain OIO43_00430 PF14602 Hexapeptide repeat of succinyl-transferase OIO43_00430 PF00132 Bacterial transferase hexapeptide (six repeats) OIO43_00430 PF12804 MobA-like NTP transferase domain OIO43_00435 PF04608 Phosphatidylglycerophosphatase A OIO43_00440 PF02769 AIR synthase related protein, C-terminal domain OIO43_00440 PF00586 AIR synthase related protein, N-terminal domain OIO43_00445 PF01029 NusB family OIO43_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase OIO43_00455 PF00925 GTP cyclohydrolase II OIO43_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase OIO43_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase OIO43_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain OIO43_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family OIO43_00490 PF00581 Rhodanese-like domain OIO43_00495 PF02666 Phosphatidylserine decarboxylase OIO43_00505 PF00512 His Kinase A (phospho-acceptor) domain OIO43_00505 PF00989 PAS fold OIO43_00505 PF11808 Phosphate regulon sensor protein PhoR OIO43_00505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_00510 PF00072 Response regulator receiver domain OIO43_00510 PF00486 Transcriptional regulatory protein, C terminal OIO43_00520 PF00106 short chain dehydrogenase OIO43_00525 PF01554 MatE OIO43_00530 PF00155 Aminotransferase class I and II OIO43_00535 PF04286 Protein of unknown function (DUF445) OIO43_00550 PF04262 Glutamate-cysteine ligase OIO43_00555 PF02600 Disulfide bond formation protein DsbB OIO43_00560 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) OIO43_00560 PF04717 Type VI secretion system, phage-baseplate injector OIO43_00560 PF13296 Putative type VI secretion system Rhs element Vgr OIO43_00565 PF13936 Helix-turn-helix domain OIO43_00565 PF00665 Integrase core domain OIO43_00575 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase OIO43_00575 PF10135 Rod binding protein OIO43_00615 PF05728 Uncharacterised protein family (UPF0227) OIO43_00620 PF00204 DNA gyrase B OIO43_00620 PF01751 Toprim domain OIO43_00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_00620 PF00986 DNA gyrase B subunit, carboxyl terminus OIO43_00625 PF04115 Ureidoglycolate lyase OIO43_00630 PF03561 Allantoicase repeat OIO43_00635 PF01494 FAD binding domain OIO43_00645 PF00860 Permease family OIO43_00650 PF00576 HIUase/Transthyretin family OIO43_00680 PF11412 Disulphide bond corrector protein DsbC OIO43_00680 PF02683 Cytochrome C biogenesis protein transmembrane region OIO43_00685 PF07694 5TMR of 5TMR-LYT OIO43_00685 PF00990 Diguanylate cyclase, GGDEF domain OIO43_00690 PF07859 alpha/beta hydrolase fold OIO43_00700 PF03960 ArsC family OIO43_00705 PF03372 Endonuclease/Exonuclease/phosphatase family OIO43_00710 PF00156 Phosphoribosyl transferase domain OIO43_00725 PF00593 TonB dependent receptor OIO43_00725 PF07715 TonB-dependent Receptor Plug Domain OIO43_00735 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain OIO43_00735 PF02951 Prokaryotic glutathione synthetase, N-terminal domain OIO43_00740 PF04101 Glycosyltransferase family 28 C-terminal domain OIO43_00740 PF03033 Glycosyltransferase family 28 N-terminal domain OIO43_00745 PF08245 Mur ligase middle domain OIO43_00745 PF02875 Mur ligase family, glutamate ligase domain OIO43_00745 PF01225 Mur ligase family, catalytic domain OIO43_00750 PF01820 D-ala D-ala ligase N-terminus OIO43_00750 PF07478 D-ala D-ala ligase C-terminus OIO43_00755 PF08478 POTRA domain, FtsQ-type OIO43_00755 PF03799 Cell division protein FtsQ OIO43_00760 PF02491 SHS2 domain inserted in FTSA OIO43_00765 PF00091 Tubulin/FtsZ family, GTPase domain OIO43_00765 PF12327 FtsZ family, C-terminal domain OIO43_00770 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase OIO43_00780 PF01551 Peptidase family M23 OIO43_00785 PF17831 Pyruvate dehydrogenase E1 component middle domain OIO43_00785 PF00456 Transketolase, thiamine diphosphate binding domain OIO43_00790 PF02817 e3 binding domain OIO43_00790 PF00364 Biotin-requiring enzyme OIO43_00790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OIO43_00800 PF01169 Uncharacterized protein family UPF0016 OIO43_00805 PF07715 TonB-dependent Receptor Plug Domain OIO43_00805 PF00593 TonB dependent receptor OIO43_00810 PF00258 Flavodoxin OIO43_00810 PF01613 Flavin reductase like domain OIO43_00815 PF03692 Putative zinc- or iron-chelating domain OIO43_00820 PF00571 CBS domain OIO43_00820 PF00478 IMP dehydrogenase / GMP reductase domain OIO43_00825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OIO43_00825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OIO43_00825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OIO43_00825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OIO43_00830 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region OIO43_00830 PF01243 Pyridoxamine 5'-phosphate oxidase OIO43_00835 PF01368 DHH family OIO43_00835 PF02272 DHHA1 domain OIO43_00835 PF17768 RecJ OB domain OIO43_00855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO43_00860 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) OIO43_00865 PF04452 RNA methyltransferase OIO43_00870 PF00924 Mechanosensitive ion channel OIO43_00880 PF00501 AMP-binding enzyme OIO43_00880 PF13193 AMP-binding enzyme C-terminal domain OIO43_00880 PF16177 Acetyl-coenzyme A synthetase N-terminus OIO43_00885 PF00857 Isochorismatase family OIO43_00890 PF01037 Lrp/AsnC ligand binding domain OIO43_00895 PF00296 Luciferase-like monooxygenase OIO43_00900 PF03358 NADPH-dependent FMN reductase OIO43_00905 PF00072 Response regulator receiver domain OIO43_00905 PF00196 Bacterial regulatory proteins, luxR family OIO43_00915 PF00072 Response regulator receiver domain OIO43_00915 PF01627 Hpt domain OIO43_00915 PF00512 His Kinase A (phospho-acceptor) domain OIO43_00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_00915 PF00672 HAMP domain OIO43_00920 PF04341 Protein of unknown function, DUF485 OIO43_00925 PF00474 Sodium:solute symporter family OIO43_00945 PF00990 Diguanylate cyclase, GGDEF domain OIO43_00955 PF17755 UvrA DNA-binding domain OIO43_00955 PF00005 ABC transporter OIO43_00955 PF17760 UvrA interaction domain OIO43_00960 PF16925 Tetracyclin repressor-like, C-terminal domain OIO43_00960 PF00440 Bacterial regulatory proteins, tetR family OIO43_00965 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_00965 PF00107 Zinc-binding dehydrogenase OIO43_00975 PF06942 GlpM protein OIO43_00980 PF08543 Phosphomethylpyrimidine kinase OIO43_00980 PF03070 TENA/THI-4/PQQC family OIO43_00980 PF02581 Thiamine monophosphate synthase OIO43_00990 PF00665 Integrase core domain OIO43_00990 PF13936 Helix-turn-helix domain OIO43_01000 PF14863 Alkyl sulfatase dimerisation OIO43_01000 PF14864 Alkyl sulfatase C-terminal OIO43_01000 PF00753 Metallo-beta-lactamase superfamily OIO43_01010 PF00665 Integrase core domain OIO43_01010 PF13936 Helix-turn-helix domain OIO43_01020 PF07690 Major Facilitator Superfamily OIO43_01025 PF00436 Single-strand binding protein family OIO43_01035 PF03591 AzlC protein OIO43_01045 PF00324 Amino acid permease OIO43_01050 PF00155 Aminotransferase class I and II OIO43_01050 PF00392 Bacterial regulatory proteins, gntR family OIO43_01055 PF00202 Aminotransferase class-III OIO43_01060 PF00171 Aldehyde dehydrogenase family OIO43_01065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_01070 PF00857 Isochorismatase family OIO43_01075 PF02678 Pirin OIO43_01075 PF05726 Pirin C-terminal cupin domain OIO43_01080 PF01593 Flavin containing amine oxidoreductase OIO43_01100 PF07690 Major Facilitator Superfamily OIO43_01105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_01105 PF03466 LysR substrate binding domain OIO43_01125 PF00248 Aldo/keto reductase family OIO43_01130 PF12833 Helix-turn-helix domain OIO43_01130 PF02311 AraC-like ligand binding domain OIO43_01160 PF00665 Integrase core domain OIO43_01160 PF13936 Helix-turn-helix domain OIO43_01180 PF01638 HxlR-like helix-turn-helix OIO43_01185 PF02525 Flavodoxin-like fold OIO43_01205 PF02705 K+ potassium transporter OIO43_01230 PF00230 Major intrinsic protein OIO43_01245 PF00977 Histidine biosynthesis protein OIO43_01250 PF01636 Phosphotransferase enzyme family OIO43_01275 PF00977 Histidine biosynthesis protein OIO43_01290 PF00117 Glutamine amidotransferase class-I OIO43_01295 PF00475 Imidazoleglycerol-phosphate dehydratase OIO43_01315 PF00583 Acetyltransferase (GNAT) family OIO43_01320 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain OIO43_01320 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain OIO43_01330 PF00672 HAMP domain OIO43_01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_01330 PF00512 His Kinase A (phospho-acceptor) domain OIO43_01335 PF00486 Transcriptional regulatory protein, C terminal OIO43_01335 PF00072 Response regulator receiver domain OIO43_01340 PF17674 HHH domain OIO43_01340 PF00575 S1 RNA binding domain OIO43_01340 PF09371 Tex-like protein N-terminal domain OIO43_01340 PF16921 Tex protein YqgF-like domain OIO43_01345 PF01740 STAS domain OIO43_01345 PF00916 Sulfate permease family OIO43_01350 PF00106 short chain dehydrogenase OIO43_01355 PF01053 Cys/Met metabolism PLP-dependent enzyme OIO43_01360 PF12848 ABC transporter OIO43_01360 PF00005 ABC transporter OIO43_01405 PF00529 HlyD membrane-fusion protein of T1SS OIO43_01405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO43_01410 PF00873 AcrB/AcrD/AcrF family OIO43_01415 PF01545 Cation efflux family OIO43_01455 PF00324 Amino acid permease OIO43_01470 PF00749 tRNA synthetases class I (E and Q), catalytic domain OIO43_01485 PF01795 MraW methylase family OIO43_01495 PF00905 Penicillin binding protein transpeptidase domain OIO43_01495 PF03717 Penicillin-binding Protein dimerisation domain OIO43_01500 PF01225 Mur ligase family, catalytic domain OIO43_01500 PF02875 Mur ligase family, glutamate ligase domain OIO43_01500 PF08245 Mur ligase middle domain OIO43_01505 PF02875 Mur ligase family, glutamate ligase domain OIO43_01505 PF01225 Mur ligase family, catalytic domain OIO43_01505 PF08245 Mur ligase middle domain OIO43_01510 PF00953 Glycosyl transferase family 4 OIO43_01520 PF13847 Methyltransferase domain OIO43_01525 PF00912 Transglycosylase OIO43_01525 PF00905 Penicillin binding protein transpeptidase domain OIO43_01525 PF17092 Penicillin-binding protein OB-like domain OIO43_01530 PF11104 Type IV pilus assembly protein PilM; OIO43_01535 PF05137 Fimbrial assembly protein (PilN) OIO43_01540 PF04350 Pilus assembly protein, PilO OIO43_01550 PF11741 AMIN domain OIO43_01550 PF00263 Bacterial type II and III secretion system protein OIO43_01550 PF03958 Bacterial type II/III secretion system short domain OIO43_01550 PF07660 Secretin and TonB N terminus short domain OIO43_01555 PF01202 Shikimate kinase OIO43_01560 PF01761 3-dehydroquinate synthase OIO43_01570 PF01493 GXGXG motif OIO43_01570 PF00310 Glutamine amidotransferases class-II OIO43_01570 PF01645 Conserved region in glutamate synthase OIO43_01570 PF04898 Glutamate synthase central domain OIO43_01575 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_01575 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster OIO43_01585 PF04011 LemA family OIO43_01590 PF04536 TPM domain OIO43_01600 PF00114 Pilin (bacterial filament) OIO43_01600 PF07963 Prokaryotic N-terminal methylation motif OIO43_01615 PF00905 Penicillin binding protein transpeptidase domain OIO43_01640 PF00210 Ferritin-like domain OIO43_01645 PF04324 BFD-like [2Fe-2S] binding domain OIO43_01650 PF01042 Endoribonuclease L-PSP OIO43_01655 PF04607 Region found in RelA / SpoT proteins OIO43_01655 PF13291 ACT domain OIO43_01655 PF02824 TGS domain OIO43_01665 PF01192 RNA polymerase Rpb6 OIO43_01670 PF00625 Guanylate kinase OIO43_01675 PF02401 LytB protein OIO43_01715 PF00886 Ribosomal protein S16 OIO43_01720 PF01782 RimM N-terminal domain OIO43_01720 PF05239 PRC-barrel domain OIO43_01725 PF01746 tRNA (Guanine-1)-methyltransferase OIO43_01730 PF01245 Ribosomal protein L19 OIO43_01735 PF00561 alpha/beta hydrolase fold OIO43_01740 PF03280 Proteobacterial lipase chaperone protein OIO43_01745 PF09157 Pseudouridine synthase II TruB, C-terminal OIO43_01745 PF16198 tRNA pseudouridylate synthase B C-terminal domain OIO43_01745 PF01509 TruB family pseudouridylate synthase (N terminal domain) OIO43_01750 PF01925 Sulfite exporter TauE/SafE OIO43_01760 PF00892 EamA-like transporter family OIO43_01765 PF00892 EamA-like transporter family OIO43_01770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OIO43_01770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OIO43_01775 PF02913 FAD linked oxidases, C-terminal domain OIO43_01775 PF01565 FAD binding domain OIO43_01785 PF03992 Antibiotic biosynthesis monooxygenase OIO43_01790 PF02525 Flavodoxin-like fold OIO43_01800 PF07690 Major Facilitator Superfamily OIO43_01805 PF12805 FUSC-like inner membrane protein yccS OIO43_01810 PF00080 Copper/zinc superoxide dismutase (SODC) OIO43_01815 PF01594 AI-2E family transporter OIO43_01820 PF13614 AAA domain OIO43_01840 PF08241 Methyltransferase domain OIO43_01850 PF00324 Amino acid permease OIO43_01855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase OIO43_01855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain OIO43_01860 PF00202 Aminotransferase class-III OIO43_01865 PF04958 Arginine N-succinyltransferase beta subunit OIO43_01870 PF00171 Aldehyde dehydrogenase family OIO43_01875 PF04996 Succinylarginine dihydrolase OIO43_01880 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family OIO43_01895 PF00082 Subtilase family OIO43_01895 PF05922 Peptidase inhibitor I9 OIO43_01910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_01910 PF03466 LysR substrate binding domain OIO43_01915 PF00892 EamA-like transporter family OIO43_01925 PF02092 Glycyl-tRNA synthetase beta subunit OIO43_01925 PF05746 DALR anticodon binding domain OIO43_01930 PF02091 Glycyl-tRNA synthetase alpha subunit OIO43_01955 PF00571 CBS domain OIO43_01960 PF04024 PspC domain OIO43_01970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_01970 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_01970 PF12806 Acetyl-CoA dehydrogenase C-terminal like OIO43_01970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_01980 PF18317 Shikimate 5'-dehydrogenase C-terminal domain OIO43_01980 PF01488 Shikimate / quinate 5-dehydrogenase OIO43_01980 PF08501 Shikimate dehydrogenase substrate binding domain OIO43_01985 PF01218 Coproporphyrinogen III oxidase OIO43_01990 PF00925 GTP cyclohydrolase II OIO43_01995 PF13292 1-deoxy-D-xylulose-5-phosphate synthase OIO43_01995 PF02780 Transketolase, C-terminal domain OIO43_01995 PF02779 Transketolase, pyrimidine binding domain OIO43_02000 PF00459 Inositol monophosphatase family OIO43_02005 PF03880 DbpA RNA binding domain OIO43_02005 PF00270 DEAD/DEAH box helicase OIO43_02005 PF12343 Cold shock protein DEAD box A OIO43_02005 PF00271 Helicase conserved C-terminal domain OIO43_02015 PF00005 ABC transporter OIO43_02020 PF02405 Permease MlaE OIO43_02030 PF05494 MlaC protein OIO43_02040 PF01544 CorA-like Mg2+ transporter protein OIO43_02045 PF03641 Possible lysine decarboxylase OIO43_02050 PF00293 NUDIX domain OIO43_02055 PF00156 Phosphoribosyl transferase domain OIO43_02060 PF00270 DEAD/DEAH box helicase OIO43_02060 PF00271 Helicase conserved C-terminal domain OIO43_02060 PF17191 RecG wedge domain OIO43_02075 PF01553 Acyltransferase OIO43_02085 PF00375 Sodium:dicarboxylate symporter family OIO43_02095 PF01926 50S ribosome-binding GTPase OIO43_02100 PF02082 Transcriptional regulator OIO43_02105 PF00970 Oxidoreductase FAD-binding domain OIO43_02105 PF00042 Globin OIO43_02105 PF00175 Oxidoreductase NAD-binding domain OIO43_02115 PF05872 Bacterial protein of unknown function (DUF853) OIO43_02120 PF01053 Cys/Met metabolism PLP-dependent enzyme OIO43_02125 PF00117 Glutamine amidotransferase class-I OIO43_02130 PF00338 Ribosomal protein S10p/S20e OIO43_02135 PF00297 Ribosomal protein L3 OIO43_02140 PF00573 Ribosomal protein L4/L1 family OIO43_02145 PF00276 Ribosomal protein L23 OIO43_02150 PF03947 Ribosomal Proteins L2, C-terminal domain OIO43_02150 PF00181 Ribosomal Proteins L2, RNA binding domain OIO43_02155 PF00203 Ribosomal protein S19 OIO43_02160 PF00237 Ribosomal protein L22p/L17e OIO43_02170 PF00252 Ribosomal protein L16p/L10e OIO43_02175 PF00831 Ribosomal L29 protein OIO43_02180 PF00366 Ribosomal protein S17 OIO43_02185 PF00238 Ribosomal protein L14p/L23e OIO43_02190 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 OIO43_02190 PF00467 KOW motif OIO43_02195 PF00281 Ribosomal protein L5 OIO43_02195 PF00673 ribosomal L5P family C-terminus OIO43_02200 PF00253 Ribosomal protein S14p/S29e OIO43_02205 PF00410 Ribosomal protein S8 OIO43_02210 PF00347 Ribosomal protein L6 OIO43_02215 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast OIO43_02220 PF00333 Ribosomal protein S5, N-terminal domain OIO43_02220 PF03719 Ribosomal protein S5, C-terminal domain OIO43_02225 PF00327 Ribosomal protein L30p/L7e OIO43_02230 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A OIO43_02235 PF00344 SecY translocase OIO43_02240 PF00444 Ribosomal protein L36 OIO43_02245 PF00416 Ribosomal protein S13/S18 OIO43_02250 PF00411 Ribosomal protein S11 OIO43_02255 PF01479 S4 domain OIO43_02255 PF00163 Ribosomal protein S4/S9 N-terminal domain OIO43_02260 PF01000 RNA polymerase Rpb3/RpoA insert domain OIO43_02260 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain OIO43_02260 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain OIO43_02265 PF01196 Ribosomal protein L17 OIO43_02270 PF00743 Flavin-binding monooxygenase-like OIO43_02275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_02275 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_02275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_02280 PF03937 Flavinator of succinate dehydrogenase OIO43_02310 PF09526 Probable metal-binding protein (DUF2387) OIO43_02315 PF01432 Peptidase family M3 OIO43_02320 PF08461 Ribonuclease R winged-helix domain OIO43_02320 PF17876 Cold shock domain OIO43_02320 PF00575 S1 RNA binding domain OIO43_02320 PF00773 RNB domain OIO43_02320 PF08206 Ribonuclease B OB domain OIO43_02365 PF01557 Fumarylacetoacetate (FAA) hydrolase family OIO43_02370 PF12833 Helix-turn-helix domain OIO43_02375 PF00892 EamA-like transporter family OIO43_02380 PF03631 Virulence factor BrkB OIO43_02385 PF03358 NADPH-dependent FMN reductase OIO43_02410 PF02130 Uncharacterized protein family UPF0054 OIO43_02415 PF02562 PhoH-like protein OIO43_02420 PF04055 Radical SAM superfamily OIO43_02420 PF01938 TRAM domain OIO43_02420 PF00919 Uncharacterized protein family UPF0004 OIO43_02425 PF01551 Peptidase family M23 OIO43_02425 PF10145 Phage-related minor tail protein OIO43_02425 PF01464 Transglycosylase SLT domain OIO43_02435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain OIO43_02435 PF00056 lactate/malate dehydrogenase, NAD binding domain OIO43_02455 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ OIO43_02460 PF01066 CDP-alcohol phosphatidyltransferase OIO43_02505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_02505 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_02505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_02510 PF00440 Bacterial regulatory proteins, tetR family OIO43_02510 PF17932 Tetracyclin repressor-like, C-terminal domain OIO43_02525 PF01039 Carboxyl transferase domain OIO43_02530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_02530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_02530 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_02540 PF00289 Biotin carboxylase, N-terminal domain OIO43_02540 PF00364 Biotin-requiring enzyme OIO43_02540 PF02785 Biotin carboxylase C-terminal domain OIO43_02540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OIO43_02550 PF04386 Stringent starvation protein B OIO43_02555 PF00043 Glutathione S-transferase, C-terminal domain OIO43_02555 PF13417 Glutathione S-transferase, N-terminal domain OIO43_02560 PF00380 Ribosomal protein S9/S16 OIO43_02565 PF00572 Ribosomal protein L13 OIO43_02570 PF04166 Pyridoxal phosphate biosynthetic protein PdxA OIO43_02575 PF00398 Ribosomal RNA adenine dimethylase OIO43_02580 PF00149 Calcineurin-like phosphoesterase OIO43_02600 PF16360 GTP-binding GTPase Middle Region OIO43_02600 PF13167 GTP-binding GTPase N-terminal OIO43_02600 PF01926 50S ribosome-binding GTPase OIO43_02610 PF13091 PLD-like domain OIO43_02615 PF00149 Calcineurin-like phosphoesterase OIO43_02615 PF10518 TAT (twin-arginine translocation) pathway signal sequence OIO43_02620 PF01389 OmpA-like transmembrane domain OIO43_02620 PF00691 OmpA family OIO43_02625 PF00990 Diguanylate cyclase, GGDEF domain OIO43_02625 PF17152 Periplasmic sensor domain OIO43_02660 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_02660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OIO43_02670 PF04273 Putative phosphatase (DUF442) OIO43_02670 PF00753 Metallo-beta-lactamase superfamily OIO43_02675 PF00561 alpha/beta hydrolase fold OIO43_02680 PF00085 Thioredoxin OIO43_02685 PF03061 Thioesterase superfamily OIO43_02720 PF03887 YfbU domain OIO43_02795 PF04945 YHS domain OIO43_02800 PF00512 His Kinase A (phospho-acceptor) domain OIO43_02800 PF00672 HAMP domain OIO43_02800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_02805 PF00486 Transcriptional regulatory protein, C terminal OIO43_02805 PF00072 Response regulator receiver domain OIO43_02815 PF07732 Multicopper oxidase OIO43_02815 PF07731 Multicopper oxidase OIO43_02815 PF00394 Multicopper oxidase OIO43_02835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO43_02840 PF00873 AcrB/AcrD/AcrF family OIO43_02850 PF07664 Ferrous iron transport protein B C terminus OIO43_02850 PF02421 Ferrous iron transport protein B OIO43_02850 PF07670 Nucleoside recognition OIO43_02865 PF13411 MerR HTH family regulatory protein OIO43_02890 PF00589 Phage integrase family OIO43_02890 PF13356 Arm DNA-binding domain OIO43_02895 PF04461 Protein of unknown function (DUF520) OIO43_02905 PF05430 S-adenosyl-L-methionine-dependent methyltransferase OIO43_02905 PF01266 FAD dependent oxidoreductase OIO43_02915 PF03795 YCII-related domain OIO43_02920 PF04279 Intracellular septation protein A OIO43_02925 PF02811 PHP domain OIO43_02930 PF01062 Bestrophin, RFP-TM, chloride channel OIO43_02935 PF04002 RadC-like JAB domain OIO43_02940 PF04127 DNA / pantothenate metabolism flavoprotein OIO43_02940 PF02441 Flavoprotein OIO43_02945 PF07549 SecD/SecF GG Motif OIO43_02945 PF02355 Protein export membrane protein OIO43_02950 PF07549 SecD/SecF GG Motif OIO43_02950 PF13721 SecD export protein N-terminal TM region OIO43_02950 PF02355 Protein export membrane protein OIO43_02955 PF02699 Preprotein translocase subunit OIO43_02960 PF01702 Queuine tRNA-ribosyltransferase OIO43_02980 PF02547 Queuosine biosynthesis protein OIO43_02990 PF00512 His Kinase A (phospho-acceptor) domain OIO43_02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_02990 PF00672 HAMP domain OIO43_02990 PF01627 Hpt domain OIO43_02990 PF00072 Response regulator receiver domain OIO43_02990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OIO43_02995 PF03710 Glutamate-ammonia ligase adenylyltransferase OIO43_02995 PF08335 GlnD PII-uridylyltransferase OIO43_03000 PF01063 Amino-transferase class IV OIO43_03010 PF01522 Polysaccharide deacetylase OIO43_03015 PF13439 Glycosyltransferase Family 4 OIO43_03015 PF00534 Glycosyl transferases group 1 OIO43_03035 PF13439 Glycosyltransferase Family 4 OIO43_03035 PF00534 Glycosyl transferases group 1 OIO43_03040 PF00535 Glycosyl transferase family 2 OIO43_03045 PF13439 Glycosyltransferase Family 4 OIO43_03045 PF00534 Glycosyl transferases group 1 OIO43_03055 PF01336 OB-fold nucleic acid binding domain OIO43_03055 PF02938 GAD domain OIO43_03055 PF00152 tRNA synthetases class II (D, K and N) OIO43_03065 PF00593 TonB dependent receptor OIO43_03065 PF07715 TonB-dependent Receptor Plug Domain OIO43_03085 PF06146 Phosphate-starvation-inducible E OIO43_03090 PF12806 Acetyl-CoA dehydrogenase C-terminal like OIO43_03090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_03090 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_03090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_03095 PF12806 Acetyl-CoA dehydrogenase C-terminal like OIO43_03095 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_03095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_03095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_03105 PF00672 HAMP domain OIO43_03105 PF00512 His Kinase A (phospho-acceptor) domain OIO43_03110 PF00486 Transcriptional regulatory protein, C terminal OIO43_03110 PF00072 Response regulator receiver domain OIO43_03115 PF02696 Uncharacterized ACR, YdiU/UPF0061 family OIO43_03135 PF01923 Cobalamin adenosyltransferase OIO43_03140 PF07715 TonB-dependent Receptor Plug Domain OIO43_03140 PF00593 TonB dependent receptor OIO43_03145 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase OIO43_03150 PF00291 Pyridoxal-phosphate dependent enzyme OIO43_03175 PF00290 Tryptophan synthase alpha chain OIO43_03180 PF01039 Carboxyl transferase domain OIO43_03185 PF02875 Mur ligase family, glutamate ligase domain OIO43_03185 PF08245 Mur ligase middle domain OIO43_03200 PF00753 Metallo-beta-lactamase superfamily OIO43_03205 PF10417 C-terminal domain of 1-Cys peroxiredoxin OIO43_03205 PF00578 AhpC/TSA family OIO43_03210 PF02810 SEC-C motif OIO43_03210 PF07517 SecA DEAD-like domain OIO43_03210 PF01043 SecA preprotein cross-linking domain OIO43_03210 PF07516 SecA Wing and Scaffold domain OIO43_03220 PF07690 Major Facilitator Superfamily OIO43_03220 PF00083 Sugar (and other) transporter OIO43_03225 PF03006 Haemolysin-III related OIO43_03260 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OIO43_03260 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OIO43_03260 PF00378 Enoyl-CoA hydratase/isomerase OIO43_03265 PF02803 Thiolase, C-terminal domain OIO43_03265 PF00108 Thiolase, N-terminal domain OIO43_03270 PF12833 Helix-turn-helix domain OIO43_03270 PF02311 AraC-like ligand binding domain OIO43_03275 PF02515 CoA-transferase family III OIO43_03280 PF04966 Carbohydrate-selective porin, OprB family OIO43_03285 PF01011 PQQ enzyme repeat OIO43_03290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OIO43_03290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OIO43_03300 PF00893 Small Multidrug Resistance protein OIO43_03310 PF00108 Thiolase, N-terminal domain OIO43_03310 PF02803 Thiolase, C-terminal domain OIO43_03320 PF00691 OmpA family OIO43_03320 PF13505 Outer membrane protein beta-barrel domain OIO43_03330 PF01139 tRNA-splicing ligase RtcB OIO43_03335 PF00324 Amino acid permease OIO43_03340 PF05175 Methyltransferase small domain OIO43_03340 PF08468 Methyltransferase small domain N-terminal OIO43_03345 PF00860 Permease family OIO43_03350 PF03144 Elongation factor Tu domain 2 OIO43_03350 PF00679 Elongation factor G C-terminus OIO43_03350 PF00009 Elongation factor Tu GTP binding domain OIO43_03355 PF01741 Large-conductance mechanosensitive channel, MscL OIO43_03370 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain OIO43_03370 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain OIO43_03370 PF06827 Zinc finger found in FPG and IleRS OIO43_03375 PF02245 Methylpurine-DNA glycosylase (MPG) OIO43_03385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO43_03400 PF13098 Thioredoxin-like domain OIO43_03400 PF10411 Disulfide bond isomerase protein N-terminus OIO43_03405 PF01571 Aminomethyltransferase folate-binding domain OIO43_03415 PF04343 Protein of unknown function, DUF488 OIO43_03420 PF03831 PhnA domain OIO43_03420 PF08274 PhnA Zinc-Ribbon OIO43_03425 PF07411 Domain of unknown function (DUF1508) OIO43_03430 PF03129 Anticodon binding domain OIO43_03430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OIO43_03430 PF04073 Aminoacyl-tRNA editing domain OIO43_03435 PF00873 AcrB/AcrD/AcrF family OIO43_03450 PF00072 Response regulator receiver domain OIO43_03455 PF00072 Response regulator receiver domain OIO43_03460 PF01584 CheW-like domain OIO43_03465 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term OIO43_03465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OIO43_03470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_03470 PF01584 CheW-like domain OIO43_03470 PF01627 Hpt domain OIO43_03470 PF00072 Response regulator receiver domain OIO43_03480 PF07687 Peptidase dimerisation domain OIO43_03480 PF01546 Peptidase family M20/M25/M40 OIO43_03485 PF08085 Entericidin EcnA/B family OIO43_03495 PF04304 Protein of unknown function (DUF454) OIO43_03500 PF17969 L,D-transpeptidase C-terminal domain OIO43_03500 PF03734 L,D-transpeptidase catalytic domain OIO43_03540 PF00667 FAD binding domain OIO43_03540 PF00258 Flavodoxin OIO43_03540 PF00175 Oxidoreductase NAD-binding domain OIO43_03550 PF12805 FUSC-like inner membrane protein yccS OIO43_03555 PF07690 Major Facilitator Superfamily OIO43_03560 PF00881 Nitroreductase family OIO43_03575 PF01235 Sodium:alanine symporter family OIO43_03580 PF01734 Patatin-like phospholipase OIO43_03585 PF00291 Pyridoxal-phosphate dependent enzyme OIO43_03585 PF13291 ACT domain OIO43_03590 PF05992 SbmA/BacA-like family OIO43_03620 PF02934 GatB/GatE catalytic domain OIO43_03620 PF02637 GatB domain OIO43_03625 PF01425 Amidase OIO43_03630 PF02686 Glu-tRNAGln amidotransferase C subunit OIO43_03640 PF04085 rod shape-determining protein MreC OIO43_03645 PF04093 rod shape-determining protein MreD OIO43_03650 PF02545 Maf-like protein OIO43_03655 PF10150 Ribonuclease E/G family OIO43_03655 PF00575 S1 RNA binding domain OIO43_03665 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain OIO43_03665 PF06974 Protein of unknown function (DUF1298) OIO43_03670 PF01507 Phosphoadenosine phosphosulfate reductase family OIO43_03685 PF02525 Flavodoxin-like fold OIO43_03705 PF02673 Bacitracin resistance protein BacA OIO43_03710 PF06719 AraC-type transcriptional regulator N-terminus OIO43_03710 PF12833 Helix-turn-helix domain OIO43_03715 PF00550 Phosphopantetheine attachment site OIO43_03715 PF14765 Polyketide synthase dehydratase OIO43_03715 PF00109 Beta-ketoacyl synthase, N-terminal domain OIO43_03715 PF08659 KR domain OIO43_03715 PF08990 Erythronolide synthase docking OIO43_03715 PF09277 Erythronolide synthase, docking OIO43_03715 PF16197 Ketoacyl-synthetase C-terminal extension OIO43_03715 PF02801 Beta-ketoacyl synthase, C-terminal domain OIO43_03715 PF00698 Acyl transferase domain OIO43_03715 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_03720 PF01965 DJ-1/PfpI family OIO43_03730 PF00324 Amino acid permease OIO43_03735 PF04303 PrpF protein OIO43_03740 PF00348 Polyprenyl synthetase OIO43_03745 PF04237 YjbR OIO43_03750 PF01145 SPFH domain / Band 7 family OIO43_03760 PF01734 Patatin-like phospholipase OIO43_03775 PF00665 Integrase core domain OIO43_03775 PF13936 Helix-turn-helix domain OIO43_03785 PF08019 Phosphoethanolamine transferase EptA/EptB OIO43_03785 PF00884 Sulfatase OIO43_03790 PF00072 Response regulator receiver domain OIO43_03790 PF00486 Transcriptional regulatory protein, C terminal OIO43_03795 PF00512 His Kinase A (phospho-acceptor) domain OIO43_03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_03795 PF08521 Two-component sensor kinase N-terminal OIO43_03805 PF00909 Ammonium Transporter Family OIO43_03810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_03810 PF03466 LysR substrate binding domain OIO43_03830 PF08264 Anticodon-binding domain of tRNA OIO43_03830 PF00133 tRNA synthetases class I (I, L, M and V) OIO43_03830 PF10458 Valyl tRNA synthetase tRNA binding arm OIO43_03850 PF01906 Putative heavy-metal-binding OIO43_03855 PF01906 Putative heavy-metal-binding OIO43_03860 PF02321 Outer membrane efflux protein OIO43_03865 PF00873 AcrB/AcrD/AcrF family OIO43_03870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO43_03870 PF00529 HlyD membrane-fusion protein of T1SS OIO43_03875 PF01569 PAP2 superfamily OIO43_03885 PF00348 Polyprenyl synthetase OIO43_03895 PF00829 Ribosomal prokaryotic L21 protein OIO43_03900 PF01016 Ribosomal L27 protein OIO43_03905 PF03548 Outer membrane lipoprotein carrier protein LolA OIO43_03915 PF02403 Seryl-tRNA synthetase N-terminal domain OIO43_03915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OIO43_03920 PF10414 Sirohaem synthase dimerisation region OIO43_03920 PF14824 Sirohaem biosynthesis protein central OIO43_03920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OIO43_03925 PF00588 SpoU rRNA Methylase family OIO43_03930 PF01638 HxlR-like helix-turn-helix OIO43_03935 PF03358 NADPH-dependent FMN reductase OIO43_03940 PF13520 Amino acid permease OIO43_03945 PF00465 Iron-containing alcohol dehydrogenase OIO43_03955 PF03099 Biotin/lipoate A/B protein ligase family OIO43_03960 PF04359 Protein of unknown function (DUF493) OIO43_03965 PF04546 Sigma-70, non-essential region OIO43_03965 PF03979 Sigma-70 factor, region 1.1 OIO43_03965 PF00140 Sigma-70 factor, region 1.2 OIO43_03965 PF04542 Sigma-70 region 2 OIO43_03965 PF04539 Sigma-70 region 3 OIO43_03965 PF04545 Sigma-70, region 4 OIO43_03980 PF00581 Rhodanese-like domain OIO43_03980 PF17773 UPF0176 acylphosphatase like domain OIO43_03990 PF00285 Citrate synthase, C-terminal domain OIO43_03995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OIO43_04000 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OIO43_04005 PF00890 FAD binding domain OIO43_04005 PF02910 Fumarate reductase flavoprotein C-term OIO43_04010 PF13085 2Fe-2S iron-sulfur cluster binding domain OIO43_04025 PF16078 2-oxoglutarate dehydrogenase N-terminus OIO43_04025 PF00676 Dehydrogenase E1 component OIO43_04025 PF16870 2-oxoglutarate dehydrogenase C-terminal OIO43_04025 PF02779 Transketolase, pyrimidine binding domain OIO43_04030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OIO43_04030 PF00364 Biotin-requiring enzyme OIO43_04030 PF02817 e3 binding domain OIO43_04035 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_04035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OIO43_04040 PF08442 ATP-grasp domain OIO43_04040 PF00549 CoA-ligase OIO43_04045 PF00549 CoA-ligase OIO43_04045 PF02629 CoA binding domain OIO43_04050 PF00579 tRNA synthetases class I (W and Y) OIO43_04055 PF05661 Protein of unknown function (DUF808) OIO43_04060 PF04228 Putative neutral zinc metallopeptidase OIO43_04065 PF00999 Sodium/hydrogen exchanger family OIO43_04080 PF09587 Bacterial capsule synthesis protein PGA_cap OIO43_04090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OIO43_04095 PF00582 Universal stress protein family OIO43_04100 PF00132 Bacterial transferase hexapeptide (six repeats) OIO43_04105 PF01272 Transcription elongation factor, GreA/GreB, C-term OIO43_04105 PF03449 Transcription elongation factor, N-terminal OIO43_04110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OIO43_04110 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain OIO43_04110 PF02142 MGS-like domain OIO43_04115 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain OIO43_04115 PF00117 Glutamine amidotransferase class-I OIO43_04130 PF01985 CRS1 / YhbY (CRM) domain OIO43_04135 PF01728 FtsJ-like methyltransferase OIO43_04140 PF17862 AAA+ lid domain OIO43_04140 PF00004 ATPase family associated with various cellular activities (AAA) OIO43_04140 PF06480 FtsH Extracellular OIO43_04140 PF01434 Peptidase family M41 OIO43_04145 PF00809 Pterin binding enzyme OIO43_04165 PF16655 PhoD-like phosphatase, N-terminal domain OIO43_04165 PF09423 PhoD-like phosphatase OIO43_04180 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain OIO43_04180 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain OIO43_04195 PF00083 Sugar (and other) transporter OIO43_04200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OIO43_04200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OIO43_04205 PF01266 FAD dependent oxidoreductase OIO43_04205 PF16901 C-terminal domain of alpha-glycerophosphate oxidase OIO43_04210 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain OIO43_04210 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain OIO43_04215 PF00781 Diacylglycerol kinase catalytic domain OIO43_04220 PF00149 Calcineurin-like phosphoesterase OIO43_04225 PF00166 Chaperonin 10 Kd subunit OIO43_04230 PF00118 TCP-1/cpn60 chaperonin family OIO43_04290 PF01219 Prokaryotic diacylglycerol kinase OIO43_04295 PF00753 Metallo-beta-lactamase superfamily OIO43_04300 PF03009 Glycerophosphoryl diester phosphodiesterase family OIO43_04305 PF00873 AcrB/AcrD/AcrF family OIO43_04315 PF01435 Peptidase family M48 OIO43_04320 PF01464 Transglycosylase SLT domain OIO43_04325 PF01171 PP-loop family OIO43_04335 PF00497 Bacterial extracellular solute-binding proteins, family 3 OIO43_04335 PF01464 Transglycosylase SLT domain OIO43_04340 PF01272 Transcription elongation factor, GreA/GreB, C-term OIO43_04340 PF03449 Transcription elongation factor, N-terminal OIO43_04355 PF00975 Thioesterase domain OIO43_04355 PF13193 AMP-binding enzyme C-terminal domain OIO43_04355 PF00501 AMP-binding enzyme OIO43_04355 PF00668 Condensation domain OIO43_04355 PF00550 Phosphopantetheine attachment site OIO43_04365 PF09857 Putative toxin of bacterial toxin-antitoxin pair OIO43_04385 PF13276 HTH-like domain OIO43_04385 PF00665 Integrase core domain OIO43_04385 PF13333 Integrase core domain OIO43_04410 PF00881 Nitroreductase family OIO43_04425 PF02595 Glycerate kinase family OIO43_04430 PF00384 Molybdopterin oxidoreductase OIO43_04435 PF02634 FdhD/NarQ family OIO43_04440 PF06803 Protein of unknown function (DUF1232) OIO43_04445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OIO43_04445 PF11890 Domain of unknown function (DUF3410) OIO43_04445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OIO43_04450 PF00152 tRNA synthetases class II (D, K and N) OIO43_04460 PF18073 Rubredoxin metal binding domain OIO43_04465 PF00324 Amino acid permease OIO43_04475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OIO43_04475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain OIO43_04480 PF01678 Diaminopimelate epimerase OIO43_04485 PF01810 LysE type translocator OIO43_04490 PF00589 Phage integrase family OIO43_04490 PF02899 Phage integrase, N-terminal SAM-like domain OIO43_04495 PF01012 Electron transfer flavoprotein domain OIO43_04500 PF00766 Electron transfer flavoprotein FAD-binding domain OIO43_04500 PF01012 Electron transfer flavoprotein domain OIO43_04505 PF00521 DNA gyrase/topoisomerase IV, subunit A OIO43_04505 PF03989 DNA gyrase C-terminal domain, beta-propeller OIO43_04520 PF00535 Glycosyl transferase family 2 OIO43_04540 PF13533 Biotin-lipoyl like OIO43_04550 PF00266 Aminotransferase class-V OIO43_04565 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 OIO43_04575 PF12704 MacB-like periplasmic core domain OIO43_04575 PF02687 FtsX-like permease family OIO43_04580 PF00005 ABC transporter OIO43_04585 PF03772 Competence protein OIO43_04585 PF13567 Domain of unknown function (DUF4131) OIO43_04585 PF00753 Metallo-beta-lactamase superfamily OIO43_04595 PF06965 Na+/H+ antiporter 1 OIO43_04595 PF01343 Peptidase family S49 OIO43_04600 PF12697 Alpha/beta hydrolase family OIO43_04605 PF00551 Formyl transferase OIO43_04610 PF02769 AIR synthase related protein, C-terminal domain OIO43_04610 PF00586 AIR synthase related protein, N-terminal domain OIO43_04615 PF01594 AI-2E family transporter OIO43_04620 PF00308 Bacterial dnaA protein OIO43_04620 PF08299 Bacterial dnaA protein helix-turn-helix OIO43_04620 PF11638 DnaA N-terminal domain OIO43_04635 PF13936 Helix-turn-helix domain OIO43_04635 PF00665 Integrase core domain OIO43_04660 PF00588 SpoU rRNA Methylase family OIO43_04660 PF08032 RNA 2'-O ribose methyltransferase substrate binding OIO43_04665 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain OIO43_04675 PF00691 OmpA family OIO43_04680 PF04052 TolB amino-terminal domain OIO43_04680 PF07676 WD40-like Beta Propeller Repeat OIO43_04690 PF02472 Biopolymer transport protein ExbD/TolR OIO43_04695 PF01618 MotA/TolQ/ExbB proton channel family OIO43_04700 PF03061 Thioesterase superfamily OIO43_04705 PF07687 Peptidase dimerisation domain OIO43_04705 PF01546 Peptidase family M20/M25/M40 OIO43_04710 PF05496 Holliday junction DNA helicase RuvB P-loop domain OIO43_04710 PF17864 RuvB AAA lid domain OIO43_04710 PF05491 RuvB C-terminal winged helix domain OIO43_04715 PF01330 RuvA N terminal domain OIO43_04715 PF07499 RuvA, C-terminal domain OIO43_04720 PF01966 HD domain OIO43_04725 PF02769 AIR synthase related protein, C-terminal domain OIO43_04725 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal OIO43_04725 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain OIO43_04730 PF07690 Major Facilitator Superfamily OIO43_04740 PF01784 NIF3 (NGG1p interacting factor 3) OIO43_04745 PF00378 Enoyl-CoA hydratase/isomerase OIO43_04750 PF00293 NUDIX domain OIO43_04750 PF01467 Cytidylyltransferase-like OIO43_04760 PF00578 AhpC/TSA family OIO43_04775 PF06508 Queuosine biosynthesis protein QueC OIO43_04785 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal OIO43_04785 PF14602 Hexapeptide repeat of succinyl-transferase OIO43_04785 PF00132 Bacterial transferase hexapeptide (six repeats) OIO43_04795 PF03466 LysR substrate binding domain OIO43_04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_04800 PF12857 TOBE-like domain OIO43_04800 PF00005 ABC transporter OIO43_04805 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_04810 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_04825 PF01063 Amino-transferase class IV OIO43_04830 PF02618 YceG-like family OIO43_04835 PF02223 Thymidylate kinase OIO43_04845 PF02910 Fumarate reductase flavoprotein C-term OIO43_04845 PF00890 FAD binding domain OIO43_04850 PF13180 PDZ domain OIO43_04860 PF13302 Acetyltransferase (GNAT) domain OIO43_04865 PF00009 Elongation factor Tu GTP binding domain OIO43_04865 PF00679 Elongation factor G C-terminus OIO43_04865 PF06421 GTP-binding protein LepA C-terminus OIO43_04865 PF03144 Elongation factor Tu domain 2 OIO43_04870 PF10502 Signal peptidase, peptidase S26 OIO43_04880 PF00035 Double-stranded RNA binding motif OIO43_04880 PF14622 Ribonuclease-III-like OIO43_04885 PF01926 50S ribosome-binding GTPase OIO43_04885 PF07650 KH domain OIO43_04895 PF11967 Recombination protein O N terminal OIO43_04895 PF02565 Recombination protein O C terminal OIO43_04900 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ OIO43_04905 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) OIO43_04910 PF00106 short chain dehydrogenase OIO43_04940 PF00155 Aminotransferase class I and II OIO43_04950 PF17151 Periplasmic sensor domain OIO43_04950 PF00990 Diguanylate cyclase, GGDEF domain OIO43_04960 PF00271 Helicase conserved C-terminal domain OIO43_04960 PF04851 Type III restriction enzyme, res subunit OIO43_04960 PF12344 Ultra-violet resistance protein B OIO43_04960 PF17757 UvrB interaction domain OIO43_04960 PF02151 UvrB/uvrC motif OIO43_04970 PF00892 EamA-like transporter family OIO43_04975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain OIO43_04975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain OIO43_04990 PF01926 50S ribosome-binding GTPase OIO43_04990 PF01018 GTP1/OBG OIO43_04995 PF01472 PUA domain OIO43_04995 PF00696 Amino acid kinase family OIO43_05005 PF07759 Protein of unknown function (DUF1615) OIO43_05010 PF01207 Dihydrouridine synthase (Dus) OIO43_05015 PF03060 Nitronate monooxygenase OIO43_05030 PF02350 UDP-N-acetylglucosamine 2-epimerase OIO43_05060 PF03441 FAD binding domain of DNA photolyase OIO43_05060 PF00875 DNA photolyase OIO43_05065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO43_05070 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_05075 PF07943 Penicillin-binding protein 5, C-terminal domain OIO43_05075 PF00768 D-alanyl-D-alanine carboxypeptidase OIO43_05085 PF03971 Monomeric isocitrate dehydrogenase OIO43_05090 PF00849 RNA pseudouridylate synthase OIO43_05095 PF00180 Isocitrate/isopropylmalate dehydrogenase OIO43_05115 PF06779 Uncharacterised MFS-type transporter YbfB OIO43_05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_05120 PF03466 LysR substrate binding domain OIO43_05125 PF00375 Sodium:dicarboxylate symporter family OIO43_05130 PF02567 Phenazine biosynthesis-like protein OIO43_05135 PF00675 Insulinase (Peptidase family M16) OIO43_05135 PF05193 Peptidase M16 inactive domain OIO43_05160 PF02581 Thiamine monophosphate synthase OIO43_05165 PF00202 Aminotransferase class-III OIO43_05175 PF00849 RNA pseudouridylate synthase OIO43_05180 PF00271 Helicase conserved C-terminal domain OIO43_05180 PF12137 RNA polymerase recycling family C-terminal OIO43_05180 PF00176 SNF2 family N-terminal domain OIO43_05180 PF18339 RapA N-terminal Tudor like domain 1 OIO43_05180 PF18337 RapA N-terminal Tudor like domain OIO43_05190 PF00440 Bacterial regulatory proteins, tetR family OIO43_05195 PF00175 Oxidoreductase NAD-binding domain OIO43_05195 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO43_05195 PF00970 Oxidoreductase FAD-binding domain OIO43_05200 PF00487 Fatty acid desaturase OIO43_05220 PF00202 Aminotransferase class-III OIO43_05225 PF00282 Pyridoxal-dependent decarboxylase conserved domain OIO43_05230 PF00171 Aldehyde dehydrogenase family OIO43_05235 PF01037 Lrp/AsnC ligand binding domain OIO43_05240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OIO43_05240 PF00205 Thiamine pyrophosphate enzyme, central domain OIO43_05240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OIO43_05245 PF00324 Amino acid permease OIO43_05250 PF12849 PBP superfamily domain OIO43_05255 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_05260 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_05265 PF00005 ABC transporter OIO43_05270 PF01343 Peptidase family S49 OIO43_05270 PF08496 Peptidase family S49 N-terminal OIO43_05285 PF00206 Lyase OIO43_05285 PF08328 Adenylosuccinate lyase C-terminal OIO43_05290 PF04356 Protein of unknown function (DUF489) OIO43_05300 PF13344 Haloacid dehalogenase-like hydrolase OIO43_05300 PF00293 NUDIX domain OIO43_05305 PF00132 Bacterial transferase hexapeptide (six repeats) OIO43_05310 PF07943 Penicillin-binding protein 5, C-terminal domain OIO43_05310 PF00768 D-alanyl-D-alanine carboxypeptidase OIO43_05325 PF01975 Survival protein SurE OIO43_05330 PF01551 Peptidase family M23 OIO43_05330 PF01476 LysM domain OIO43_05335 PF03466 LysR substrate binding domain OIO43_05335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_05340 PF13654 AAA domain OIO43_05340 PF05362 Lon protease (S16) C-terminal proteolytic domain OIO43_05345 PF07690 Major Facilitator Superfamily OIO43_05350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OIO43_05355 PF13593 SBF-like CPA transporter family (DUF4137) OIO43_05360 PF01197 Ribosomal protein L31 OIO43_05365 PF12792 CSS motif domain associated with EAL OIO43_05365 PF00563 EAL domain OIO43_05375 PF04055 Radical SAM superfamily OIO43_05380 PF01132 Elongation factor P (EF-P) OB domain OIO43_05380 PF08207 Elongation factor P (EF-P) KOW-like domain OIO43_05380 PF09285 Elongation factor P, C-terminal OIO43_05385 PF02554 Carbon starvation protein CstA OIO43_05385 PF13722 5TM C-terminal transporter carbon starvation CstA OIO43_05390 PF04328 Selenoprotein, putative OIO43_05410 PF00665 Integrase core domain OIO43_05410 PF13276 HTH-like domain OIO43_05410 PF13333 Integrase core domain OIO43_05430 PF02678 Pirin OIO43_05430 PF17954 Quercetinase C-terminal cupin domain OIO43_05435 PF00291 Pyridoxal-phosphate dependent enzyme OIO43_05440 PF13309 HTH domain OIO43_05440 PF08348 YheO-like PAS domain OIO43_05450 PF00668 Condensation domain OIO43_05450 PF00501 AMP-binding enzyme OIO43_05450 PF13193 AMP-binding enzyme C-terminal domain OIO43_05450 PF00550 Phosphopantetheine attachment site OIO43_05455 PF13193 AMP-binding enzyme C-terminal domain OIO43_05455 PF00501 AMP-binding enzyme OIO43_05455 PF00550 Phosphopantetheine attachment site OIO43_05455 PF00975 Thioesterase domain OIO43_05455 PF00668 Condensation domain OIO43_05460 PF01032 FecCD transport family OIO43_05465 PF01032 FecCD transport family OIO43_05470 PF00005 ABC transporter OIO43_05475 PF01497 Periplasmic binding protein OIO43_05480 PF07715 TonB-dependent Receptor Plug Domain OIO43_05480 PF00593 TonB dependent receptor OIO43_05485 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) OIO43_05490 PF00501 AMP-binding enzyme OIO43_05490 PF00668 Condensation domain OIO43_05490 PF00550 Phosphopantetheine attachment site OIO43_05495 PF13193 AMP-binding enzyme C-terminal domain OIO43_05495 PF00501 AMP-binding enzyme OIO43_05500 PF00857 Isochorismatase family OIO43_05500 PF00550 Phosphopantetheine attachment site OIO43_05505 PF00282 Pyridoxal-dependent decarboxylase conserved domain OIO43_05510 PF00005 ABC transporter OIO43_05515 PF00005 ABC transporter OIO43_05520 PF00975 Thioesterase domain OIO43_05525 PF17837 4'-phosphopantetheinyl transferase N-terminal domain OIO43_05525 PF01648 4'-phosphopantetheinyl transferase superfamily OIO43_05530 PF00425 chorismate binding enzyme OIO43_05540 PF01208 Uroporphyrinogen decarboxylase (URO-D) OIO43_05545 PF05675 Protein of unknown function (DUF817) OIO43_05560 PF00144 Beta-lactamase OIO43_05565 PF01227 GTP cyclohydrolase I OIO43_05570 PF01799 [2Fe-2S] binding domain OIO43_05570 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO43_05575 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase OIO43_05575 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain OIO43_05590 PF00218 Indole-3-glycerol phosphate synthase OIO43_05595 PF02885 Glycosyl transferase family, helical bundle domain OIO43_05595 PF00591 Glycosyl transferase family, a/b domain OIO43_05600 PF00593 TonB dependent receptor OIO43_05600 PF07715 TonB-dependent Receptor Plug Domain OIO43_05605 PF11838 ERAP1-like C-terminal domain OIO43_05605 PF01433 Peptidase family M1 domain OIO43_05610 PF00117 Glutamine amidotransferase class-I OIO43_05620 PF00854 POT family OIO43_05625 PF00120 Glutamine synthetase, catalytic domain OIO43_05625 PF03951 Glutamine synthetase, beta-Grasp domain OIO43_05630 PF04345 Chorismate lyase OIO43_05635 PF01040 UbiA prenyltransferase family OIO43_05670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OIO43_05670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OIO43_05675 PF01784 NIF3 (NGG1p interacting factor 3) OIO43_05680 PF13180 PDZ domain OIO43_05685 PF01743 Poly A polymerase head domain OIO43_05685 PF12627 Probable RNA and SrmB- binding site of polymerase A OIO43_05690 PF01515 Phosphate acetyl/butaryl transferase OIO43_05690 PF03949 Malic enzyme, NAD binding domain OIO43_05690 PF00390 Malic enzyme, N-terminal domain OIO43_05695 PF00563 EAL domain OIO43_05695 PF00990 Diguanylate cyclase, GGDEF domain OIO43_05695 PF03707 Bacterial signalling protein N terminal repeat OIO43_05700 PF04452 RNA methyltransferase OIO43_05705 PF02219 Methylenetetrahydrofolate reductase OIO43_05710 PF05221 S-adenosyl-L-homocysteine hydrolase OIO43_05710 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain OIO43_05725 PF09317 Domain of unknown function (DUF1974) OIO43_05725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_05725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_05730 PF04055 Radical SAM superfamily OIO43_05735 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_05735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OIO43_05745 PF07690 Major Facilitator Superfamily OIO43_05755 PF00557 Metallopeptidase family M24 OIO43_05760 PF00318 Ribosomal protein S2 OIO43_05765 PF00889 Elongation factor TS OIO43_05775 PF12833 Helix-turn-helix domain OIO43_05795 PF03330 Lytic transglycolase OIO43_05795 PF05036 Sporulation related domain OIO43_05800 PF13406 Transglycosylase SLT domain OIO43_05805 PF01098 Cell cycle protein OIO43_05815 PF14489 QueF-like protein OIO43_05815 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term OIO43_05820 PF01061 ABC-2 type transporter OIO43_05825 PF00005 ABC transporter OIO43_05855 PF00464 Serine hydroxymethyltransferase OIO43_05860 PF02321 Outer membrane efflux protein OIO43_05865 PF00873 AcrB/AcrD/AcrF family OIO43_05870 PF13533 Biotin-lipoyl like OIO43_05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_05875 PF03466 LysR substrate binding domain OIO43_05880 PF00497 Bacterial extracellular solute-binding proteins, family 3 OIO43_05885 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_05890 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_05895 PF00005 ABC transporter OIO43_05900 PF00893 Small Multidrug Resistance protein OIO43_05905 PF00037 4Fe-4S binding domain OIO43_05910 PF01136 Peptidase family U32 OIO43_05910 PF16325 Peptidase family U32 C-terminal domain OIO43_05915 PF00392 Bacterial regulatory proteins, gntR family OIO43_05915 PF00155 Aminotransferase class I and II OIO43_05920 PF02567 Phenazine biosynthesis-like protein OIO43_05925 PF00175 Oxidoreductase NAD-binding domain OIO43_05925 PF00970 Oxidoreductase FAD-binding domain OIO43_05930 PF01980 tRNA-methyltransferase O OIO43_05930 PF18389 TrmO C-terminal domain OIO43_05940 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OIO43_05940 PF00437 Type II/IV secretion system protein OIO43_05950 PF00486 Transcriptional regulatory protein, C terminal OIO43_05950 PF00072 Response regulator receiver domain OIO43_05955 PF08521 Two-component sensor kinase N-terminal OIO43_05955 PF00512 His Kinase A (phospho-acceptor) domain OIO43_05955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_05965 PF00293 NUDIX domain OIO43_05975 PF00912 Transglycosylase OIO43_05975 PF00905 Penicillin binding protein transpeptidase domain OIO43_05975 PF14814 Bifunctional transglycosylase second domain OIO43_05980 PF01513 ATP-NAD kinase OIO43_05985 PF07023 Protein of unknown function (DUF1315) OIO43_05990 PF02885 Glycosyl transferase family, helical bundle domain OIO43_05990 PF00591 Glycosyl transferase family, a/b domain OIO43_05995 PF00375 Sodium:dicarboxylate symporter family OIO43_06000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_06000 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_06000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_06005 PF00756 Putative esterase OIO43_06010 PF01817 Chorismate mutase type II OIO43_06010 PF01842 ACT domain OIO43_06010 PF00800 Prephenate dehydratase OIO43_06015 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OIO43_06025 PF07687 Peptidase dimerisation domain OIO43_06025 PF01546 Peptidase family M20/M25/M40 OIO43_06030 PF00753 Metallo-beta-lactamase superfamily OIO43_06040 PF03883 Peroxide stress protein YaaA OIO43_06050 PF05690 Thiazole biosynthesis protein ThiG OIO43_06060 PF04241 Protein of unknown function (DUF423) OIO43_06065 PF04542 Sigma-70 region 2 OIO43_06065 PF00140 Sigma-70 factor, region 1.2 OIO43_06065 PF04545 Sigma-70, region 4 OIO43_06080 PF00313 'Cold-shock' DNA-binding domain OIO43_06085 PF00270 DEAD/DEAH box helicase OIO43_06085 PF00271 Helicase conserved C-terminal domain OIO43_06095 PF00881 Nitroreductase family OIO43_06100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus OIO43_06100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus OIO43_06120 PF01180 Dihydroorotate dehydrogenase OIO43_06125 PF02674 Colicin V production protein OIO43_06130 PF00156 Phosphoribosyl transferase domain OIO43_06145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OIO43_06145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OIO43_06150 PF01435 Peptidase family M48 OIO43_06155 PF09424 Yqey-like protein OIO43_06160 PF01165 Ribosomal protein S21 OIO43_06165 PF00814 Glycoprotease family OIO43_06185 PF00069 Protein kinase domain OIO43_06210 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB OIO43_06210 PF08479 POTRA domain, ShlB-type OIO43_06210 PF17287 POTRA domain OIO43_06215 PF13018 Extended Signal Peptide of Type V secretion system OIO43_06215 PF04829 Pre-toxin domain with VENN motif OIO43_06215 PF05860 haemagglutination activity domain OIO43_06215 PF13332 Hemagglutinin repeat OIO43_06215 PF13018 Extended Signal Peptide of Type V secretion system OIO43_06215 PF04829 Pre-toxin domain with VENN motif OIO43_06215 PF13018 Extended Signal Peptide of Type V secretion system OIO43_06215 PF13332 Hemagglutinin repeat OIO43_06215 PF05860 haemagglutination activity domain OIO43_06215 PF13332 Hemagglutinin repeat OIO43_06215 PF04829 Pre-toxin domain with VENN motif OIO43_06215 PF05860 haemagglutination activity domain OIO43_06235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_06235 PF03466 LysR substrate binding domain OIO43_06240 PF00202 Aminotransferase class-III OIO43_06245 PF00171 Aldehyde dehydrogenase family OIO43_06250 PF00324 Amino acid permease OIO43_06280 PF04076 Bacterial OB fold (BOF) protein OIO43_06305 PF00561 alpha/beta hydrolase fold OIO43_06310 PF03616 Sodium/glutamate symporter OIO43_06320 PF07729 FCD domain OIO43_06320 PF00392 Bacterial regulatory proteins, gntR family OIO43_06370 PF08946 Osmosensory transporter coiled coil OIO43_06370 PF00083 Sugar (and other) transporter OIO43_06400 PF04403 Paraquat-inducible protein A OIO43_06405 PF02470 MlaD protein OIO43_06415 PF00576 HIUase/Transthyretin family OIO43_06425 PF00486 Transcriptional regulatory protein, C terminal OIO43_06425 PF00072 Response regulator receiver domain OIO43_06430 PF00512 His Kinase A (phospho-acceptor) domain OIO43_06430 PF00672 HAMP domain OIO43_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_06470 PF08521 Two-component sensor kinase N-terminal OIO43_06470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_06470 PF00512 His Kinase A (phospho-acceptor) domain OIO43_06475 PF00072 Response regulator receiver domain OIO43_06475 PF00486 Transcriptional regulatory protein, C terminal OIO43_06495 PF01177 Asp/Glu/Hydantoin racemase OIO43_06500 PF00892 EamA-like transporter family OIO43_06505 PF07995 Glucose / Sorbosone dehydrogenase OIO43_06525 PF00375 Sodium:dicarboxylate symporter family OIO43_06535 PF16123 Hydroxyacylglutathione hydrolase C-terminus OIO43_06535 PF00753 Metallo-beta-lactamase superfamily OIO43_06540 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_06545 PF09383 NIL domain OIO43_06545 PF00005 ABC transporter OIO43_06550 PF03180 NLPA lipoprotein OIO43_06555 PF02843 Phosphoribosylglycinamide synthetase, C domain OIO43_06555 PF02844 Phosphoribosylglycinamide synthetase, N domain OIO43_06555 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain OIO43_06560 PF01808 AICARFT/IMPCHase bienzyme OIO43_06560 PF02142 MGS-like domain OIO43_06565 PF02954 Bacterial regulatory protein, Fis family OIO43_06585 PF01134 Glucose inhibited division protein A OIO43_06585 PF13932 GidA associated domain OIO43_06595 PF14403 Circularly permuted ATP-grasp type 2 OIO43_06605 PF01841 Transglutaminase-like superfamily OIO43_06605 PF08379 Bacterial transglutaminase-like N-terminal region OIO43_06615 PF01168 Alanine racemase, N-terminal domain OIO43_06615 PF00842 Alanine racemase, C-terminal domain OIO43_06620 PF03796 DnaB-like helicase C terminal domain OIO43_06620 PF00772 DnaB-like helicase N terminal domain OIO43_06625 PF01281 Ribosomal protein L9, N-terminal domain OIO43_06625 PF03948 Ribosomal protein L9, C-terminal domain OIO43_06630 PF01084 Ribosomal protein S18 OIO43_06635 PF01250 Ribosomal protein S6 OIO43_06640 PF01040 UbiA prenyltransferase family OIO43_06645 PF03626 Prokaryotic Cytochrome C oxidase subunit IV OIO43_06650 PF00510 Cytochrome c oxidase subunit III OIO43_06655 PF00115 Cytochrome C and Quinol oxidase polypeptide I OIO43_06660 PF06481 COX Aromatic Rich Motif OIO43_06660 PF00116 Cytochrome C oxidase subunit II, periplasmic domain OIO43_06670 PF02896 PEP-utilising enzyme, TIM barrel domain OIO43_06670 PF00391 PEP-utilising enzyme, mobile domain OIO43_06670 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain OIO43_06675 PF03618 Kinase/pyrophosphorylase OIO43_06685 PF14883 Hypothetical glycosyl hydrolase family 13 OIO43_06685 PF01522 Polysaccharide deacetylase OIO43_06690 PF00535 Glycosyl transferase family 2 OIO43_06695 PF13994 PgaD-like protein OIO43_06705 PF00296 Luciferase-like monooxygenase OIO43_06720 PF03466 LysR substrate binding domain OIO43_06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_06730 PF00472 RF-1 domain OIO43_06730 PF03462 PCRF domain OIO43_06735 PF13847 Methyltransferase domain OIO43_06735 PF17827 PrmC N-terminal domain OIO43_06740 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_06745 PF09084 NMT1/THI5 like OIO43_06750 PF12833 Helix-turn-helix domain OIO43_06755 PF00106 short chain dehydrogenase OIO43_06760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_06760 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_06760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_06765 PF00501 AMP-binding enzyme OIO43_06765 PF13193 AMP-binding enzyme C-terminal domain OIO43_06770 PF01613 Flavin reductase like domain OIO43_06775 PF00899 ThiF family OIO43_06780 PF03109 ABC1 family OIO43_06795 PF03814 Potassium-transporting ATPase A subunit OIO43_06805 PF02669 K+-transporting ATPase, c chain OIO43_06810 PF13493 Domain of unknown function (DUF4118) OIO43_06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_06810 PF00512 His Kinase A (phospho-acceptor) domain OIO43_06810 PF02702 Osmosensitive K+ channel His kinase sensor domain OIO43_06815 PF00486 Transcriptional regulatory protein, C terminal OIO43_06815 PF00072 Response regulator receiver domain OIO43_06820 PF00120 Glutamine synthetase, catalytic domain OIO43_06830 PF03232 Ubiquinone biosynthesis protein COQ7 OIO43_06835 PF07690 Major Facilitator Superfamily OIO43_06840 PF07244 Surface antigen variable number repeat OIO43_06840 PF01103 Surface antigen OIO43_06840 PF17243 POTRA domain TamA domain 1 OIO43_06855 PF06434 Aconitate hydratase 2 N-terminus OIO43_06855 PF11791 Aconitate B N-terminal domain OIO43_06855 PF00330 Aconitase family (aconitate hydratase) OIO43_06865 PF00027 Cyclic nucleotide-binding domain OIO43_06865 PF00520 Ion transport protein OIO43_06870 PF07690 Major Facilitator Superfamily OIO43_06885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_06885 PF03466 LysR substrate binding domain OIO43_06890 PF04284 Protein of unknown function (DUF441) OIO43_06900 PF01479 S4 domain OIO43_06900 PF00849 RNA pseudouridylate synthase OIO43_06915 PF00849 RNA pseudouridylate synthase OIO43_06915 PF01479 S4 domain OIO43_06920 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE OIO43_06925 PF08676 MutL C terminal dimerisation domain OIO43_06925 PF01119 DNA mismatch repair protein, C-terminal domain OIO43_06935 PF17209 Hfq protein OIO43_06945 PF00881 Nitroreductase family OIO43_06955 PF00149 Calcineurin-like phosphoesterase OIO43_06960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OIO43_06965 PF00749 tRNA synthetases class I (E and Q), catalytic domain OIO43_06965 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain OIO43_06970 PF00117 Glutamine amidotransferase class-I OIO43_06970 PF00958 GMP synthase C terminal domain OIO43_06970 PF02540 NAD synthase OIO43_06975 PF05985 Ethanolamine ammonia-lyase light chain (EutC) OIO43_06980 PF06751 Ethanolamine ammonia lyase large subunit (EutB) OIO43_06985 PF13520 Amino acid permease OIO43_06990 PF00171 Aldehyde dehydrogenase family OIO43_07005 PF00465 Iron-containing alcohol dehydrogenase OIO43_07010 PF05970 PIF1-like helicase OIO43_07010 PF14493 Helix-turn-helix domain OIO43_07020 PF06445 GyrI-like small molecule binding domain OIO43_07025 PF02110 Hydroxyethylthiazole kinase family OIO43_07040 PF11940 Domain of unknown function (DUF3458) Ig-like fold OIO43_07040 PF17432 Domain of unknown function (DUF3458_C) ARM repeats OIO43_07040 PF01433 Peptidase family M1 domain OIO43_07055 PF13953 PapC C-terminal domain OIO43_07055 PF13954 PapC N-terminal domain OIO43_07055 PF00577 Outer membrane usher protein OIO43_07080 PF01817 Chorismate mutase type II OIO43_07085 PF01037 Lrp/AsnC ligand binding domain OIO43_07095 PF02224 Cytidylate kinase OIO43_07110 PF13276 HTH-like domain OIO43_07110 PF00665 Integrase core domain OIO43_07110 PF13333 Integrase core domain OIO43_07120 PF00440 Bacterial regulatory proteins, tetR family OIO43_07125 PF00593 TonB dependent receptor OIO43_07125 PF07715 TonB-dependent Receptor Plug Domain OIO43_07130 PF00924 Mechanosensitive ion channel OIO43_07160 PF07715 TonB-dependent Receptor Plug Domain OIO43_07160 PF00593 TonB dependent receptor OIO43_07180 PF12848 ABC transporter OIO43_07180 PF00005 ABC transporter OIO43_07185 PF00582 Universal stress protein family OIO43_07210 PF00689 Cation transporting ATPase, C-terminus OIO43_07210 PF00690 Cation transporter/ATPase, N-terminus OIO43_07215 PF02308 MgtC family OIO43_07220 PF03594 Benzoate membrane transport protein OIO43_07225 PF01037 Lrp/AsnC ligand binding domain OIO43_07230 PF01810 LysE type translocator OIO43_07235 PF00923 Transaldolase/Fructose-6-phosphate aldolase OIO43_07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_07240 PF03466 LysR substrate binding domain OIO43_07250 PF00108 Thiolase, N-terminal domain OIO43_07250 PF02803 Thiolase, C-terminal domain OIO43_07260 PF01575 MaoC like domain OIO43_07275 PF07690 Major Facilitator Superfamily OIO43_07290 PF12170 DNA polymerase III tau subunit V interacting with alpha OIO43_07290 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding OIO43_07290 PF12169 DNA polymerase III subunits gamma and tau domain III OIO43_07295 PF05506 Domain of unknown function (DUF756) OIO43_07295 PF04185 Phosphoesterase family OIO43_07300 PF03061 Thioesterase superfamily OIO43_07305 PF00465 Iron-containing alcohol dehydrogenase OIO43_07315 PF01451 Low molecular weight phosphotyrosine protein phosphatase OIO43_07320 PF01565 FAD binding domain OIO43_07320 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain OIO43_07335 PF01645 Conserved region in glutamate synthase OIO43_07395 PF02384 N-6 DNA Methylase OIO43_07395 PF12161 HsdM N-terminal domain OIO43_07455 PF00145 C-5 cytosine-specific DNA methylase OIO43_07465 PF01695 IstB-like ATP binding protein OIO43_07655 PF05016 ParE toxin of type II toxin-antitoxin system, parDE OIO43_07695 PF02767 DNA polymerase III beta subunit, central domain OIO43_07695 PF00712 DNA polymerase III beta subunit, N-terminal domain OIO43_07695 PF02768 DNA polymerase III beta subunit, C-terminal domain OIO43_07765 PF12832 MFS_1 like family OIO43_07775 PF02785 Biotin carboxylase C-terminal domain OIO43_07775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OIO43_07775 PF00289 Biotin carboxylase, N-terminal domain OIO43_07780 PF00364 Biotin-requiring enzyme OIO43_07785 PF01220 Dehydroquinase class II OIO43_07790 PF11799 impB/mucB/samB family C-terminal domain OIO43_07790 PF00817 impB/mucB/samB family OIO43_07790 PF13438 Domain of unknown function (DUF4113) OIO43_07800 PF00005 ABC transporter OIO43_07805 PF00072 Response regulator receiver domain OIO43_07805 PF00486 Transcriptional regulatory protein, C terminal OIO43_07815 PF13806 Rieske-like [2Fe-2S] domain OIO43_07815 PF18267 Rubredoxin NAD+ reductase C-terminal domain OIO43_07815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OIO43_07815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OIO43_07815 PF04324 BFD-like [2Fe-2S] binding domain OIO43_07815 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_07820 PF04324 BFD-like [2Fe-2S] binding domain OIO43_07820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OIO43_07820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OIO43_07820 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_07820 PF18267 Rubredoxin NAD+ reductase C-terminal domain OIO43_07825 PF04324 BFD-like [2Fe-2S] binding domain OIO43_07825 PF00384 Molybdopterin oxidoreductase OIO43_07825 PF01568 Molydopterin dinucleotide binding domain OIO43_07825 PF04879 Molybdopterin oxidoreductase Fe4S4 domain OIO43_07830 PF12804 MobA-like NTP transferase domain OIO43_07835 PF00384 Molybdopterin oxidoreductase OIO43_07835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain OIO43_07835 PF01568 Molydopterin dinucleotide binding domain OIO43_07840 PF06463 Molybdenum Cofactor Synthesis C OIO43_07840 PF04055 Radical SAM superfamily OIO43_07850 PF02391 MoaE protein OIO43_07855 PF00994 Probable molybdopterin binding domain OIO43_07855 PF01967 MoaC family OIO43_07860 PF03454 MoeA C-terminal region (domain IV) OIO43_07860 PF00994 Probable molybdopterin binding domain OIO43_07860 PF03453 MoeA N-terminal region (domain I and II) OIO43_07865 PF01638 HxlR-like helix-turn-helix OIO43_07870 PF00392 Bacterial regulatory proteins, gntR family OIO43_07870 PF00155 Aminotransferase class I and II OIO43_07875 PF00892 EamA-like transporter family OIO43_07895 PF02635 DsrE/DsrF-like family OIO43_07900 PF16363 GDP-mannose 4,6 dehydratase OIO43_07905 PF10415 Fumarase C C-terminus OIO43_07905 PF00206 Lyase OIO43_07925 PF01266 FAD dependent oxidoreductase OIO43_07935 PF02542 YgbB family OIO43_07945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OIO43_07945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OIO43_07955 PF00072 Response regulator receiver domain OIO43_07955 PF00158 Sigma-54 interaction domain OIO43_07955 PF02954 Bacterial regulatory protein, Fis family OIO43_07960 PF00512 His Kinase A (phospho-acceptor) domain OIO43_07960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_07960 PF00989 PAS fold OIO43_07970 PF18693 TRAM domain OIO43_07970 PF04055 Radical SAM superfamily OIO43_07970 PF00919 Uncharacterized protein family UPF0004 OIO43_07975 PF00696 Amino acid kinase family OIO43_07980 PF01765 Ribosome recycling factor OIO43_07985 PF01255 Putative undecaprenyl diphosphate synthase OIO43_07995 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain OIO43_07995 PF13288 DXP reductoisomerase C-terminal domain OIO43_07995 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase OIO43_08000 PF13180 PDZ domain OIO43_08000 PF17820 PDZ domain OIO43_08000 PF02163 Peptidase family M50 OIO43_08005 PF07244 Surface antigen variable number repeat OIO43_08005 PF01103 Surface antigen OIO43_08015 PF00132 Bacterial transferase hexapeptide (six repeats) OIO43_08015 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD OIO43_08020 PF07977 FabA-like domain OIO43_08025 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 OIO43_08025 PF00132 Bacterial transferase hexapeptide (six repeats) OIO43_08040 PF02631 RecX family OIO43_08045 PF00154 recA bacterial DNA recombination protein OIO43_08050 PF01479 S4 domain OIO43_08055 PF13419 Haloacid dehalogenase-like hydrolase OIO43_08070 PF13936 Helix-turn-helix domain OIO43_08070 PF00665 Integrase core domain OIO43_08085 PF01037 Lrp/AsnC ligand binding domain OIO43_08090 PF00266 Aminotransferase class-V OIO43_08095 PF00324 Amino acid permease OIO43_08110 PF05922 Peptidase inhibitor I9 OIO43_08110 PF00082 Subtilase family OIO43_08115 PF00916 Sulfate permease family OIO43_08115 PF01740 STAS domain OIO43_08120 PF02586 SOS response associated peptidase (SRAP) OIO43_08125 PF07995 Glucose / Sorbosone dehydrogenase OIO43_08135 PF00563 EAL domain OIO43_08135 PF03707 Bacterial signalling protein N terminal repeat OIO43_08135 PF00990 Diguanylate cyclase, GGDEF domain OIO43_08150 PF02378 Phosphotransferase system, EIIC OIO43_08150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit OIO43_08155 PF00294 pfkB family carbohydrate kinase OIO43_08160 PF05524 PEP-utilising enzyme, N-terminal OIO43_08160 PF00391 PEP-utilising enzyme, mobile domain OIO43_08160 PF02896 PEP-utilising enzyme, TIM barrel domain OIO43_08160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OIO43_08160 PF00381 PTS HPr component phosphorylation site OIO43_08185 PF05525 Branched-chain amino acid transport protein OIO43_08190 PF00557 Metallopeptidase family M24 OIO43_08195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_08195 PF03466 LysR substrate binding domain OIO43_08205 PF00462 Glutaredoxin OIO43_08210 PF00202 Aminotransferase class-III OIO43_08215 PF00478 IMP dehydrogenase / GMP reductase domain OIO43_08215 PF00571 CBS domain OIO43_08240 PF02881 SRP54-type protein, helical bundle domain OIO43_08240 PF00448 SRP54-type protein, GTPase domain OIO43_08250 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) OIO43_08265 PF08173 Membrane bound YbgT-like protein OIO43_08270 PF02322 Cytochrome bd terminal oxidase subunit II OIO43_08275 PF01654 Cytochrome bd terminal oxidase subunit I OIO43_08285 PF07290 Protein of unknown function (DUF1449) OIO43_08295 PF00294 pfkB family carbohydrate kinase OIO43_08300 PF07715 TonB-dependent Receptor Plug Domain OIO43_08300 PF00593 TonB dependent receptor OIO43_08305 PF00675 Insulinase (Peptidase family M16) OIO43_08305 PF05193 Peptidase M16 inactive domain OIO43_08305 PF08367 Peptidase M16C associated OIO43_08310 PF02253 Phospholipase A1 OIO43_08315 PF02386 Cation transport protein OIO43_08320 PF02254 TrkA-N domain OIO43_08320 PF02080 TrkA-C domain OIO43_08325 PF00585 C-terminal regulatory domain of Threonine dehydratase OIO43_08325 PF00291 Pyridoxal-phosphate dependent enzyme OIO43_08330 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) OIO43_08345 PF01118 Semialdehyde dehydrogenase, NAD binding domain OIO43_08345 PF02774 Semialdehyde dehydrogenase, dimerisation domain OIO43_08355 PF02617 ATP-dependent Clp protease adaptor protein ClpS OIO43_08360 PF02861 Clp amino terminal domain, pathogenicity island component OIO43_08360 PF10431 C-terminal, D2-small domain, of ClpB protein OIO43_08360 PF07724 AAA domain (Cdc48 subfamily) OIO43_08360 PF00004 ATPase family associated with various cellular activities (AAA) OIO43_08360 PF17871 AAA lid domain OIO43_08365 PF02694 Uncharacterised BCR, YnfA/UPF0060 family OIO43_08370 PF00793 DAHP synthetase I family OIO43_08385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO43_08385 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_08415 PF06418 CTP synthase N-terminus OIO43_08415 PF00117 Glutamine amidotransferase class-I OIO43_08420 PF00793 DAHP synthetase I family OIO43_08425 PF00113 Enolase, C-terminal TIM barrel domain OIO43_08425 PF03952 Enolase, N-terminal domain OIO43_08430 PF04239 Protein of unknown function (DUF421) OIO43_08435 PF04977 Septum formation initiator OIO43_08440 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OIO43_08445 PF01144 Coenzyme A transferase OIO43_08450 PF01144 Coenzyme A transferase OIO43_08455 PF00108 Thiolase, N-terminal domain OIO43_08455 PF02803 Thiolase, C-terminal domain OIO43_08460 PF00206 Lyase OIO43_08460 PF10397 Adenylosuccinate lyase C-terminus OIO43_08465 PF00561 alpha/beta hydrolase fold OIO43_08470 PF07690 Major Facilitator Superfamily OIO43_08475 PF02627 Carboxymuconolactone decarboxylase family OIO43_08480 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal OIO43_08480 PF00775 Dioxygenase OIO43_08485 PF00775 Dioxygenase OIO43_08490 PF01487 Type I 3-dehydroquinase OIO43_08495 PF05048 Periplasmic copper-binding protein (NosD) OIO43_08500 PF04966 Carbohydrate-selective porin, OprB family OIO43_08505 PF01011 PQQ enzyme repeat OIO43_08505 PF13360 PQQ-like domain OIO43_08515 PF04143 Sulphur transport OIO43_08525 PF00753 Metallo-beta-lactamase superfamily OIO43_08530 PF01614 Bacterial transcriptional regulator OIO43_08530 PF09339 IclR helix-turn-helix domain OIO43_08535 PF03466 LysR substrate binding domain OIO43_08535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_08540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_08540 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_08540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_08555 PF00106 short chain dehydrogenase OIO43_08565 PF07690 Major Facilitator Superfamily OIO43_08575 PF01425 Amidase OIO43_08580 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OIO43_08595 PF00355 Rieske [2Fe-2S] domain OIO43_08595 PF00848 Ring hydroxylating alpha subunit (catalytic domain) OIO43_08610 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO43_08610 PF00175 Oxidoreductase NAD-binding domain OIO43_08615 PF01613 Flavin reductase like domain OIO43_08620 PF02311 AraC-like ligand binding domain OIO43_08620 PF12833 Helix-turn-helix domain OIO43_08625 PF02728 Copper amine oxidase, N3 domain OIO43_08625 PF02727 Copper amine oxidase, N2 domain OIO43_08625 PF07833 Copper amine oxidase N-terminal domain OIO43_08625 PF01179 Copper amine oxidase, enzyme domain OIO43_08635 PF00171 Aldehyde dehydrogenase family OIO43_08640 PF01804 Penicillin amidase OIO43_08645 PF12146 Serine aminopeptidase, S33 OIO43_08650 PF02803 Thiolase, C-terminal domain OIO43_08650 PF00108 Thiolase, N-terminal domain OIO43_08655 PF01144 Coenzyme A transferase OIO43_08660 PF01144 Coenzyme A transferase OIO43_08665 PF04444 Catechol dioxygenase N terminus OIO43_08665 PF00775 Dioxygenase OIO43_08670 PF02426 Muconolactone delta-isomerase OIO43_08675 PF13378 Enolase C-terminal domain-like OIO43_08675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OIO43_08680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_08680 PF03466 LysR substrate binding domain OIO43_08690 PF07729 FCD domain OIO43_08690 PF00392 Bacterial regulatory proteins, gntR family OIO43_08695 PF00920 Dehydratase family OIO43_08700 PF07690 Major Facilitator Superfamily OIO43_08710 PF00171 Aldehyde dehydrogenase family OIO43_08720 PF00561 alpha/beta hydrolase fold OIO43_08725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO43_08725 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_08730 PF00106 short chain dehydrogenase OIO43_08740 PF09278 MerR, DNA binding OIO43_08740 PF00376 MerR family regulatory protein OIO43_08750 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_08760 PF12706 Beta-lactamase superfamily domain OIO43_08765 PF00440 Bacterial regulatory proteins, tetR family OIO43_08765 PF08359 YsiA-like protein, C-terminal region OIO43_08775 PF00857 Isochorismatase family OIO43_08780 PF03466 LysR substrate binding domain OIO43_08780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_08785 PF07995 Glucose / Sorbosone dehydrogenase OIO43_08790 PF00999 Sodium/hydrogen exchanger family OIO43_08790 PF02254 TrkA-N domain OIO43_08800 PF01546 Peptidase family M20/M25/M40 OIO43_08800 PF07687 Peptidase dimerisation domain OIO43_08810 PF00145 C-5 cytosine-specific DNA methylase OIO43_08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_08815 PF00512 His Kinase A (phospho-acceptor) domain OIO43_08835 PF07690 Major Facilitator Superfamily OIO43_08840 PF04909 Amidohydrolase OIO43_08850 PF00392 Bacterial regulatory proteins, gntR family OIO43_08850 PF07702 UTRA domain OIO43_08855 PF08450 SMP-30/Gluconolactonase/LRE-like region OIO43_08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_08865 PF03466 LysR substrate binding domain OIO43_08880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO43_08880 PF00529 HlyD membrane-fusion protein of T1SS OIO43_08895 PF00171 Aldehyde dehydrogenase family OIO43_08900 PF00920 Dehydratase family OIO43_08910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_08910 PF03466 LysR substrate binding domain OIO43_08915 PF01370 NAD dependent epimerase/dehydratase family OIO43_08920 PF07690 Major Facilitator Superfamily OIO43_08925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OIO43_08925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OIO43_08930 PF12833 Helix-turn-helix domain OIO43_08930 PF06719 AraC-type transcriptional regulator N-terminus OIO43_08945 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_08945 PF00107 Zinc-binding dehydrogenase OIO43_08955 PF01032 FecCD transport family OIO43_08960 PF00005 ABC transporter OIO43_08980 PF14572 Phosphoribosyl synthetase-associated domain OIO43_08980 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase OIO43_08985 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family OIO43_09000 PF13533 Biotin-lipoyl like OIO43_09005 PF07690 Major Facilitator Superfamily OIO43_09030 PF01975 Survival protein SurE OIO43_09040 PF13291 ACT domain OIO43_09040 PF04607 Region found in RelA / SpoT proteins OIO43_09040 PF02824 TGS domain OIO43_09070 PF13936 Helix-turn-helix domain OIO43_09070 PF00665 Integrase core domain OIO43_09110 PF12146 Serine aminopeptidase, S33 OIO43_09115 PF02311 AraC-like ligand binding domain OIO43_09115 PF12833 Helix-turn-helix domain OIO43_09125 PF16527 Two-component sensor protein CpxA, periplasmic domain OIO43_09125 PF00672 HAMP domain OIO43_09125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_09125 PF00512 His Kinase A (phospho-acceptor) domain OIO43_09145 PF00529 HlyD membrane-fusion protein of T1SS OIO43_09145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO43_09150 PF00873 AcrB/AcrD/AcrF family OIO43_09155 PF00005 ABC transporter OIO43_09155 PF17755 UvrA DNA-binding domain OIO43_09155 PF17760 UvrA interaction domain OIO43_09165 PF16970 Type-1 fimbrial protein, A OIO43_09170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain OIO43_09170 PF02753 Pili assembly chaperone PapD, C-terminal domain OIO43_09175 PF13953 PapC C-terminal domain OIO43_09175 PF00577 Outer membrane usher protein OIO43_09175 PF13954 PapC N-terminal domain OIO43_09190 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_09190 PF00107 Zinc-binding dehydrogenase OIO43_09200 PF00199 Catalase OIO43_09220 PF13091 PLD-like domain OIO43_09235 PF01244 Membrane dipeptidase (Peptidase family M19) OIO43_09240 PF04055 Radical SAM superfamily OIO43_09240 PF13186 Iron-sulfur cluster-binding domain OIO43_09245 PF05402 Coenzyme PQQ synthesis protein D (PqqD) OIO43_09250 PF03070 TENA/THI-4/PQQC family OIO43_09255 PF12706 Beta-lactamase superfamily domain OIO43_09260 PF08042 PqqA family OIO43_09265 PF17941 Polyphosphate kinase C-terminal domain 1 OIO43_09265 PF02503 Polyphosphate kinase middle domain OIO43_09265 PF13090 Polyphosphate kinase C-terminal domain 2 OIO43_09265 PF13089 Polyphosphate kinase N-terminal domain OIO43_09270 PF00149 Calcineurin-like phosphoesterase OIO43_09280 PF00550 Phosphopantetheine attachment site OIO43_09280 PF00857 Isochorismatase family OIO43_09285 PF00106 short chain dehydrogenase OIO43_09290 PF00005 ABC transporter OIO43_09290 PF03459 TOBE domain OIO43_09295 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_09305 PF03459 TOBE domain OIO43_09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_09310 PF00848 Ring hydroxylating alpha subunit (catalytic domain) OIO43_09310 PF00355 Rieske [2Fe-2S] domain OIO43_09315 PF00866 Ring hydroxylating beta subunit OIO43_09320 PF00175 Oxidoreductase NAD-binding domain OIO43_09320 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO43_09320 PF00970 Oxidoreductase FAD-binding domain OIO43_09325 PF12833 Helix-turn-helix domain OIO43_09325 PF14525 AraC-binding-like domain OIO43_09335 PF01613 Flavin reductase like domain OIO43_09350 PF01738 Dienelactone hydrolase family OIO43_09355 PF07690 Major Facilitator Superfamily OIO43_09360 PF06719 AraC-type transcriptional regulator N-terminus OIO43_09360 PF12833 Helix-turn-helix domain OIO43_09380 PF00440 Bacterial regulatory proteins, tetR family OIO43_09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_09400 PF03466 LysR substrate binding domain OIO43_09405 PF01144 Coenzyme A transferase OIO43_09410 PF01144 Coenzyme A transferase OIO43_09415 PF02667 Short chain fatty acid transporter OIO43_09420 PF02803 Thiolase, C-terminal domain OIO43_09420 PF00108 Thiolase, N-terminal domain OIO43_09425 PF03466 LysR substrate binding domain OIO43_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_09430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_09430 PF03466 LysR substrate binding domain OIO43_09445 PF10415 Fumarase C C-terminus OIO43_09445 PF00206 Lyase OIO43_09450 PF07715 TonB-dependent Receptor Plug Domain OIO43_09450 PF00593 TonB dependent receptor OIO43_09455 PF00083 Sugar (and other) transporter OIO43_09470 PF00005 ABC transporter OIO43_09475 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_09480 PF04069 Substrate binding domain of ABC-type glycine betaine transport system OIO43_09495 PF00392 Bacterial regulatory proteins, gntR family OIO43_09495 PF07702 UTRA domain OIO43_09505 PF02525 Flavodoxin-like fold OIO43_09510 PF01638 HxlR-like helix-turn-helix OIO43_09515 PF06445 GyrI-like small molecule binding domain OIO43_09515 PF12833 Helix-turn-helix domain OIO43_09530 PF01925 Sulfite exporter TauE/SafE OIO43_09545 PF00753 Metallo-beta-lactamase superfamily OIO43_09550 PF02954 Bacterial regulatory protein, Fis family OIO43_09550 PF00072 Response regulator receiver domain OIO43_09550 PF00158 Sigma-54 interaction domain OIO43_09555 PF01062 Bestrophin, RFP-TM, chloride channel OIO43_09560 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_09560 PF00107 Zinc-binding dehydrogenase OIO43_09565 PF00106 short chain dehydrogenase OIO43_09570 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_09570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OIO43_09575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OIO43_09575 PF00364 Biotin-requiring enzyme OIO43_09575 PF02817 e3 binding domain OIO43_09580 PF02780 Transketolase, C-terminal domain OIO43_09580 PF02779 Transketolase, pyrimidine binding domain OIO43_09585 PF00676 Dehydrogenase E1 component OIO43_09590 PF04055 Radical SAM superfamily OIO43_09605 PF00990 Diguanylate cyclase, GGDEF domain OIO43_09605 PF08448 PAS fold OIO43_09610 PF01264 Chorismate synthase OIO43_09615 PF05175 Methyltransferase small domain OIO43_09620 PF00291 Pyridoxal-phosphate dependent enzyme OIO43_09630 PF00004 ATPase family associated with various cellular activities (AAA) OIO43_09630 PF17862 AAA+ lid domain OIO43_09630 PF01434 Peptidase family M41 OIO43_09640 PF05166 YcgL domain OIO43_09660 PF01612 3'-5' exonuclease OIO43_09660 PF00570 HRDC domain OIO43_09665 PF02132 RecR protein OIO43_09665 PF13662 Toprim domain OIO43_09670 PF02575 YbaB/EbfC DNA-binding family OIO43_09680 PF01053 Cys/Met metabolism PLP-dependent enzyme OIO43_09685 PF00561 alpha/beta hydrolase fold OIO43_09690 PF08241 Methyltransferase domain OIO43_09720 PF01230 HIT domain OIO43_09755 PF00005 ABC transporter OIO43_09760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO43_09770 PF02684 Lipid-A-disaccharide synthetase OIO43_09775 PF00593 TonB dependent receptor OIO43_09775 PF07715 TonB-dependent Receptor Plug Domain OIO43_09795 PF01925 Sulfite exporter TauE/SafE OIO43_09800 PF00793 DAHP synthetase I family OIO43_09805 PF02654 Cobalamin-5-phosphate synthase OIO43_09815 PF00300 Histidine phosphatase superfamily (branch 1) OIO43_09820 PF02277 Phosphoribosyltransferase OIO43_09825 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase OIO43_09835 PF13419 Haloacid dehalogenase-like hydrolase OIO43_09860 PF00593 TonB dependent receptor OIO43_09860 PF07715 TonB-dependent Receptor Plug Domain OIO43_09865 PF03737 Aldolase/RraA OIO43_09875 PF06276 Ferric iron reductase FhuF-like transporter OIO43_09875 PF04183 IucA / IucC family OIO43_09880 PF06276 Ferric iron reductase FhuF-like transporter OIO43_09880 PF04183 IucA / IucC family OIO43_09885 PF07690 Major Facilitator Superfamily OIO43_09890 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) OIO43_09895 PF06276 Ferric iron reductase FhuF-like transporter OIO43_09895 PF04183 IucA / IucC family OIO43_09900 PF04073 Aminoacyl-tRNA editing domain OIO43_09910 PF03109 ABC1 family OIO43_09915 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_09915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_09915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_09920 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_09920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_09920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_09925 PF00487 Fatty acid desaturase OIO43_09930 PF12852 Cupin OIO43_09930 PF12833 Helix-turn-helix domain OIO43_09935 PF09312 SurA N-terminal domain OIO43_09935 PF00639 PPIC-type PPIASE domain OIO43_09940 PF00216 Bacterial DNA-binding protein OIO43_09955 PF02082 Transcriptional regulator OIO43_09960 PF00266 Aminotransferase class-V OIO43_09965 PF01592 NifU-like N terminal domain OIO43_09970 PF01521 Iron-sulphur cluster biosynthesis OIO43_09975 PF00226 DnaJ domain OIO43_09975 PF07743 HSCB C-terminal oligomerisation domain OIO43_09980 PF00012 Hsp70 protein OIO43_09985 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO43_09990 PF00211 Adenylate and Guanylate cyclase catalytic domain OIO43_10000 PF02559 CarD-like/TRCF domain OIO43_10000 PF17757 UvrB interaction domain OIO43_10000 PF00270 DEAD/DEAH box helicase OIO43_10000 PF00271 Helicase conserved C-terminal domain OIO43_10000 PF03461 TRCF domain OIO43_10020 PF03737 Aldolase/RraA OIO43_10025 PF13460 NAD(P)H-binding OIO43_10030 PF01649 Ribosomal protein S20 OIO43_10040 PF00459 Inositol monophosphatase family OIO43_10055 PF00005 ABC transporter OIO43_10055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region OIO43_10060 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_10065 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_10070 PF01432 Peptidase family M3 OIO43_10110 PF01618 MotA/TolQ/ExbB proton channel family OIO43_10115 PF02472 Biopolymer transport protein ExbD/TolR OIO43_10120 PF02472 Biopolymer transport protein ExbD/TolR OIO43_10130 PF01274 Malate synthase OIO43_10135 PF03969 AFG1-like ATPase OIO43_10145 PF00743 Flavin-binding monooxygenase-like OIO43_10155 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family OIO43_10165 PF00216 Bacterial DNA-binding protein OIO43_10170 PF00575 S1 RNA binding domain OIO43_10175 PF02224 Cytidylate kinase OIO43_10185 PF14437 MafB19-like deaminase OIO43_10195 PF03167 Uracil DNA glycosylase superfamily OIO43_10205 PF03934 Type II secretion system (T2SS), protein K OIO43_10210 PF07963 Prokaryotic N-terminal methylation motif OIO43_10210 PF11612 Type II secretion system (T2SS), protein J OIO43_10215 PF07963 Prokaryotic N-terminal methylation motif OIO43_10215 PF02501 Type II secretion system (T2SS), protein I OIO43_10230 PF01026 TatD related DNase OIO43_10240 PF09115 DNA polymerase III, delta subunit, C terminal OIO43_10245 PF02348 Cytidylyltransferase OIO43_10250 PF02606 Tetraacyldisaccharide-1-P 4'-kinase OIO43_10255 PF00005 ABC transporter OIO43_10255 PF00664 ABC transporter transmembrane region OIO43_10265 PF01618 MotA/TolQ/ExbB proton channel family OIO43_10270 PF17762 HTH domain found in ParB protein OIO43_10270 PF02195 ParB-like nuclease domain OIO43_10275 PF13614 AAA domain OIO43_10280 PF02527 rRNA small subunit methyltransferase G OIO43_10285 PF00483 Nucleotidyl transferase OIO43_10290 PF01636 Phosphotransferase enzyme family OIO43_10295 PF03968 OstA-like protein OIO43_10295 PF04453 LPS transport system D OIO43_10300 PF00639 PPIC-type PPIASE domain OIO43_10300 PF09312 SurA N-terminal domain OIO43_10305 PF01116 Fructose-bisphosphate aldolase class-II OIO43_10315 PF00162 Phosphoglycerate kinase OIO43_10325 PF02545 Maf-like protein OIO43_10330 PF08007 Cupin superfamily protein OIO43_10345 PF00375 Sodium:dicarboxylate symporter family OIO43_10350 PF06912 Protein of unknown function (DUF1275) OIO43_10355 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) OIO43_10360 PF00664 ABC transporter transmembrane region OIO43_10360 PF00005 ABC transporter OIO43_10370 PF12833 Helix-turn-helix domain OIO43_10370 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term OIO43_10375 PF01597 Glycine cleavage H-protein OIO43_10380 PF02146 Sir2 family OIO43_10385 PF00474 Sodium:solute symporter family OIO43_10390 PF01037 Lrp/AsnC ligand binding domain OIO43_10395 PF00171 Aldehyde dehydrogenase family OIO43_10395 PF01619 Proline dehydrogenase OIO43_10395 PF14850 DNA-binding domain of Proline dehydrogenase OIO43_10395 PF18327 Proline utilization A proline dehydrogenase N-terminal domain OIO43_10400 PF04229 GrpB protein OIO43_10405 PF05958 tRNA (Uracil-5-)-methyltransferase OIO43_10415 PF09992 Phosphodiester glycosidase OIO43_10425 PF04264 YceI-like domain OIO43_10435 PF02780 Transketolase, C-terminal domain OIO43_10435 PF00456 Transketolase, thiamine diphosphate binding domain OIO43_10435 PF02779 Transketolase, pyrimidine binding domain OIO43_10440 PF02773 S-adenosylmethionine synthetase, C-terminal domain OIO43_10440 PF02772 S-adenosylmethionine synthetase, central domain OIO43_10440 PF00438 S-adenosylmethionine synthetase, N-terminal domain OIO43_10460 PF00905 Penicillin binding protein transpeptidase domain OIO43_10475 PF02075 Crossover junction endodeoxyribonuclease RuvC OIO43_10480 PF03853 YjeF-related protein N-terminus OIO43_10480 PF01256 Carbohydrate kinase OIO43_10485 PF08331 Domain of unknown function (DUF1730) OIO43_10490 PF06968 Biotin and Thiamin Synthesis associated domain OIO43_10490 PF04055 Radical SAM superfamily OIO43_10505 PF16970 Type-1 fimbrial protein, A OIO43_10510 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain OIO43_10510 PF02753 Pili assembly chaperone PapD, C-terminal domain OIO43_10515 PF13953 PapC C-terminal domain OIO43_10515 PF13954 PapC N-terminal domain OIO43_10515 PF00577 Outer membrane usher protein OIO43_10535 PF00892 EamA-like transporter family OIO43_10545 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin OIO43_10555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_10555 PF03466 LysR substrate binding domain OIO43_10615 PF01048 Phosphorylase superfamily OIO43_10620 PF13356 Arm DNA-binding domain OIO43_10620 PF00589 Phage integrase family OIO43_10630 PF00440 Bacterial regulatory proteins, tetR family OIO43_10640 PF01709 Transcriptional regulator OIO43_10645 PF01037 Lrp/AsnC ligand binding domain OIO43_10655 PF00005 ABC transporter OIO43_10660 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_10665 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_10680 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OIO43_10680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_10690 PF00296 Luciferase-like monooxygenase OIO43_10695 PF03180 NLPA lipoprotein OIO43_10700 PF03180 NLPA lipoprotein OIO43_10705 PF00005 ABC transporter OIO43_10705 PF09383 NIL domain OIO43_10710 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_10715 PF06071 Protein of unknown function (DUF933) OIO43_10715 PF01926 50S ribosome-binding GTPase OIO43_10740 PF03591 AzlC protein OIO43_10745 PF05437 Branched-chain amino acid transport protein (AzlD) OIO43_10755 PF02222 ATP-grasp domain OIO43_10760 PF01966 HD domain OIO43_10760 PF08335 GlnD PII-uridylyltransferase OIO43_10760 PF01909 Nucleotidyltransferase domain OIO43_10765 PF00155 Aminotransferase class I and II OIO43_10775 PF12833 Helix-turn-helix domain OIO43_10775 PF12852 Cupin OIO43_10780 PF00255 Glutathione peroxidase OIO43_10785 PF01641 SelR domain OIO43_10790 PF00155 Aminotransferase class I and II OIO43_10795 PF00375 Sodium:dicarboxylate symporter family OIO43_10800 PF00710 Asparaginase, N-terminal OIO43_10800 PF17763 Glutaminase/Asparaginase C-terminal domain OIO43_10805 PF01336 OB-fold nucleic acid binding domain OIO43_10805 PF02811 PHP domain OIO43_10805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OIO43_10805 PF07733 Bacterial DNA polymerase III alpha NTPase domain OIO43_10805 PF14579 Helix-hairpin-helix motif OIO43_10810 PF00588 SpoU rRNA Methylase family OIO43_10815 PF00132 Bacterial transferase hexapeptide (six repeats) OIO43_10830 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_10830 PF13192 Thioredoxin domain OIO43_10845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_10845 PF03466 LysR substrate binding domain OIO43_10850 PF01758 Sodium Bile acid symporter family OIO43_10855 PF01022 Bacterial regulatory protein, arsR family OIO43_10860 PF03960 ArsC family OIO43_10870 PF13382 Adenine deaminase C-terminal domain OIO43_10870 PF01979 Amidohydrolase family OIO43_10880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_10880 PF03466 LysR substrate binding domain OIO43_10890 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin OIO43_10895 PF01177 Asp/Glu/Hydantoin racemase OIO43_10900 PF02668 Taurine catabolism dioxygenase TauD, TfdA family OIO43_10905 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_10910 PF00005 ABC transporter OIO43_10915 PF04069 Substrate binding domain of ABC-type glycine betaine transport system OIO43_10925 PF00083 Sugar (and other) transporter OIO43_10930 PF00296 Luciferase-like monooxygenase OIO43_10945 PF01654 Cytochrome bd terminal oxidase subunit I OIO43_10950 PF02322 Cytochrome bd terminal oxidase subunit II OIO43_10960 PF00392 Bacterial regulatory proteins, gntR family OIO43_10960 PF00155 Aminotransferase class I and II OIO43_10965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_10965 PF03466 LysR substrate binding domain OIO43_10980 PF00698 Acyl transferase domain OIO43_10985 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG OIO43_10995 PF01039 Carboxyl transferase domain OIO43_11000 PF06857 Malonate decarboxylase delta subunit (MdcD) OIO43_11005 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase OIO43_11010 PF16957 Malonate decarboxylase, alpha subunit, transporter OIO43_11015 PF03466 LysR substrate binding domain OIO43_11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_11025 PF07690 Major Facilitator Superfamily OIO43_11040 PF00155 Aminotransferase class I and II OIO43_11040 PF00392 Bacterial regulatory proteins, gntR family OIO43_11045 PF04172 LrgB-like family OIO43_11050 PF03788 LrgA family OIO43_11055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_11055 PF03466 LysR substrate binding domain OIO43_11060 PF14834 Glutathione S-transferase, C-terminal domain OIO43_11060 PF02798 Glutathione S-transferase, N-terminal domain OIO43_11065 PF02798 Glutathione S-transferase, N-terminal domain OIO43_11070 PF03466 LysR substrate binding domain OIO43_11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_11080 PF00581 Rhodanese-like domain OIO43_11085 PF00132 Bacterial transferase hexapeptide (six repeats) OIO43_11095 PF00266 Aminotransferase class-V OIO43_11100 PF01810 LysE type translocator OIO43_11105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_11105 PF03466 LysR substrate binding domain OIO43_11115 PF00497 Bacterial extracellular solute-binding proteins, family 3 OIO43_11120 PF00497 Bacterial extracellular solute-binding proteins, family 3 OIO43_11125 PF00005 ABC transporter OIO43_11130 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_11135 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_11150 PF00072 Response regulator receiver domain OIO43_11155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_11155 PF00072 Response regulator receiver domain OIO43_11155 PF09308 LuxQ, periplasmic OIO43_11155 PF00512 His Kinase A (phospho-acceptor) domain OIO43_11165 PF01037 Lrp/AsnC ligand binding domain OIO43_11165 PF13404 AsnC-type helix-turn-helix domain OIO43_11175 PF00717 Peptidase S24-like OIO43_11200 PF06628 Catalase-related immune-responsive OIO43_11200 PF18011 C-terminal domain found in long catalases OIO43_11200 PF00199 Catalase OIO43_11210 PF02464 Competence-damaged protein OIO43_11210 PF00994 Probable molybdopterin binding domain OIO43_11210 PF18146 Damage-inducible protein CinA KH domain OIO43_11215 PF00665 Integrase core domain OIO43_11215 PF13936 Helix-turn-helix domain OIO43_11250 PF03466 LysR substrate binding domain OIO43_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_11270 PF00501 AMP-binding enzyme OIO43_11270 PF13193 AMP-binding enzyme C-terminal domain OIO43_11275 PF00440 Bacterial regulatory proteins, tetR family OIO43_11280 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_11280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_11280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_11285 PF01039 Carboxyl transferase domain OIO43_11290 PF00378 Enoyl-CoA hydratase/isomerase OIO43_11295 PF02785 Biotin carboxylase C-terminal domain OIO43_11295 PF00364 Biotin-requiring enzyme OIO43_11295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OIO43_11295 PF18140 Propionyl-coenzyme A carboxylase BT domain OIO43_11295 PF00289 Biotin carboxylase, N-terminal domain OIO43_11300 PF00682 HMGL-like OIO43_11305 PF03466 LysR substrate binding domain OIO43_11305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_11320 PF12806 Acetyl-CoA dehydrogenase C-terminal like OIO43_11320 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_11320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_11320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_11330 PF07690 Major Facilitator Superfamily OIO43_11340 PF01144 Coenzyme A transferase OIO43_11345 PF01144 Coenzyme A transferase OIO43_11350 PF07690 Major Facilitator Superfamily OIO43_11355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_11355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_11355 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_11360 PF00378 Enoyl-CoA hydratase/isomerase OIO43_11370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OIO43_11370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OIO43_11370 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain OIO43_11375 PF00108 Thiolase, N-terminal domain OIO43_11375 PF02803 Thiolase, C-terminal domain OIO43_11380 PF09339 IclR helix-turn-helix domain OIO43_11385 PF07690 Major Facilitator Superfamily OIO43_11390 PF03060 Nitronate monooxygenase OIO43_11395 PF00378 Enoyl-CoA hydratase/isomerase OIO43_11400 PF09339 IclR helix-turn-helix domain OIO43_11405 PF02515 CoA-transferase family III OIO43_11410 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_11410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_11410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_11415 PF07690 Major Facilitator Superfamily OIO43_11420 PF13419 Haloacid dehalogenase-like hydrolase OIO43_11425 PF00266 Aminotransferase class-V OIO43_11430 PF01266 FAD dependent oxidoreductase OIO43_11435 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_11440 PF00005 ABC transporter OIO43_11440 PF08402 TOBE domain OIO43_11450 PF00392 Bacterial regulatory proteins, gntR family OIO43_11450 PF07702 UTRA domain OIO43_11455 PF01494 FAD binding domain OIO43_11460 PF01614 Bacterial transcriptional regulator OIO43_11460 PF09339 IclR helix-turn-helix domain OIO43_11465 PF02525 Flavodoxin-like fold OIO43_11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_11470 PF03466 LysR substrate binding domain OIO43_11475 PF01292 Prokaryotic cytochrome b561 OIO43_11480 PF00199 Catalase OIO43_11485 PF07690 Major Facilitator Superfamily OIO43_11490 PF00682 HMGL-like OIO43_11495 PF02515 CoA-transferase family III OIO43_11510 PF12833 Helix-turn-helix domain OIO43_11510 PF06719 AraC-type transcriptional regulator N-terminus OIO43_11525 PF02954 Bacterial regulatory protein, Fis family OIO43_11525 PF13426 PAS domain OIO43_11525 PF00158 Sigma-54 interaction domain OIO43_11530 PF00171 Aldehyde dehydrogenase family OIO43_11535 PF00107 Zinc-binding dehydrogenase OIO43_11535 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_11540 PF07859 alpha/beta hydrolase fold OIO43_11550 PF03061 Thioesterase superfamily OIO43_11555 PF00132 Bacterial transferase hexapeptide (six repeats) OIO43_11560 PF08223 PaaX-like protein C-terminal domain OIO43_11560 PF07848 PaaX-like protein OIO43_11565 PF00501 AMP-binding enzyme OIO43_11565 PF14535 AMP-binding enzyme C-terminal domain OIO43_11570 PF00108 Thiolase, N-terminal domain OIO43_11570 PF02803 Thiolase, C-terminal domain OIO43_11575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OIO43_11575 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain OIO43_11575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OIO43_11580 PF00378 Enoyl-CoA hydratase/isomerase OIO43_11585 PF00378 Enoyl-CoA hydratase/isomerase OIO43_11590 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO43_11590 PF00970 Oxidoreductase FAD-binding domain OIO43_11590 PF00175 Oxidoreductase NAD-binding domain OIO43_11595 PF01883 Iron-sulfur cluster assembly protein OIO43_11600 PF05138 Phenylacetic acid catabolic protein OIO43_11605 PF06243 Phenylacetic acid degradation B OIO43_11610 PF05138 Phenylacetic acid catabolic protein OIO43_11615 PF01575 MaoC like domain OIO43_11615 PF00171 Aldehyde dehydrogenase family OIO43_11620 PF03313 Serine dehydratase alpha chain OIO43_11620 PF03315 Serine dehydratase beta chain OIO43_11625 PF13520 Amino acid permease OIO43_11630 PF00171 Aldehyde dehydrogenase family OIO43_11635 PF00083 Sugar (and other) transporter OIO43_11645 PF04324 BFD-like [2Fe-2S] binding domain OIO43_11645 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_11655 PF01266 FAD dependent oxidoreductase OIO43_11655 PF01266 FAD dependent oxidoreductase OIO43_11660 PF05544 Proline racemase OIO43_11665 PF00392 Bacterial regulatory proteins, gntR family OIO43_11675 PF00701 Dihydrodipicolinate synthetase family OIO43_11690 PF13737 Transposase DDE domain OIO43_11705 PF00440 Bacterial regulatory proteins, tetR family OIO43_11730 PF00654 Voltage gated chloride channel OIO43_11735 PF00289 Biotin carboxylase, N-terminal domain OIO43_11735 PF00364 Biotin-requiring enzyme OIO43_11735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OIO43_11735 PF02785 Biotin carboxylase C-terminal domain OIO43_11745 PF07286 Protein of unknown function (DUF1445) OIO43_11750 PF03746 LamB/YcsF family OIO43_11755 PF01566 Natural resistance-associated macrophage protein OIO43_11760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_11790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OIO43_11790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OIO43_11825 PF13276 HTH-like domain OIO43_11825 PF13333 Integrase core domain OIO43_11825 PF00665 Integrase core domain OIO43_11830 PF03279 Bacterial lipid A biosynthesis acyltransferase OIO43_11835 PF00563 EAL domain OIO43_11835 PF03707 Bacterial signalling protein N terminal repeat OIO43_11835 PF00990 Diguanylate cyclase, GGDEF domain OIO43_11840 PF00892 EamA-like transporter family OIO43_11845 PF01037 Lrp/AsnC ligand binding domain OIO43_11850 PF00488 MutS domain V OIO43_11850 PF05190 MutS family domain IV OIO43_11850 PF05192 MutS domain III OIO43_11850 PF05188 MutS domain II OIO43_11850 PF01624 MutS domain I OIO43_11860 PF00037 4Fe-4S binding domain OIO43_11860 PF11953 Domain of unknown function (DUF3470) OIO43_11870 PF01596 O-methyltransferase OIO43_11880 PF00132 Bacterial transferase hexapeptide (six repeats) OIO43_11885 PF01205 Uncharacterized protein family UPF0029 OIO43_11895 PF00005 ABC transporter OIO43_11895 PF00664 ABC transporter transmembrane region OIO43_11895 PF03412 Peptidase C39 family OIO43_11905 PF12399 Branched-chain amino acid ATP-binding cassette transporter OIO43_11905 PF00005 ABC transporter OIO43_11910 PF03968 OstA-like protein OIO43_11925 PF01380 SIS domain OIO43_11925 PF00571 CBS domain OIO43_11930 PF09190 DALR domain OIO43_11930 PF01406 tRNA synthetases class I (C) catalytic domain OIO43_11955 PF01638 HxlR-like helix-turn-helix OIO43_11960 PF07690 Major Facilitator Superfamily OIO43_11985 PF03807 NADP oxidoreductase coenzyme F420-dependent OIO43_11985 PF14748 Pyrroline-5-carboxylate reductase dimerisation OIO43_11995 PF00313 'Cold-shock' DNA-binding domain OIO43_12000 PF01810 LysE type translocator OIO43_12030 PF02601 Exonuclease VII, large subunit OIO43_12030 PF13742 OB-fold nucleic acid binding domain OIO43_12065 PF00376 MerR family regulatory protein OIO43_12065 PF09278 MerR, DNA binding OIO43_12070 PF00403 Heavy-metal-associated domain OIO43_12080 PF03466 LysR substrate binding domain OIO43_12080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_12090 PF00848 Ring hydroxylating alpha subunit (catalytic domain) OIO43_12090 PF00355 Rieske [2Fe-2S] domain OIO43_12095 PF00866 Ring hydroxylating beta subunit OIO43_12100 PF00970 Oxidoreductase FAD-binding domain OIO43_12100 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO43_12100 PF00175 Oxidoreductase NAD-binding domain OIO43_12105 PF00106 short chain dehydrogenase OIO43_12110 PF03594 Benzoate membrane transport protein OIO43_12115 PF07690 Major Facilitator Superfamily OIO43_12125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OIO43_12125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OIO43_12130 PF11898 Domain of unknown function (DUF3418) OIO43_12130 PF00270 DEAD/DEAH box helicase OIO43_12130 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold OIO43_12130 PF00271 Helicase conserved C-terminal domain OIO43_12130 PF04408 Helicase associated domain (HA2) OIO43_12135 PF10417 C-terminal domain of 1-Cys peroxiredoxin OIO43_12135 PF00578 AhpC/TSA family OIO43_12155 PF13192 Thioredoxin domain OIO43_12155 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_12165 PF00043 Glutathione S-transferase, C-terminal domain OIO43_12165 PF02798 Glutathione S-transferase, N-terminal domain OIO43_12175 PF02390 Putative methyltransferase OIO43_12180 PF00043 Glutathione S-transferase, C-terminal domain OIO43_12180 PF13417 Glutathione S-transferase, N-terminal domain OIO43_12190 PF13488 Glycine zipper OIO43_12190 PF00691 OmpA family OIO43_12195 PF01979 Amidohydrolase family OIO43_12200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OIO43_12200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OIO43_12210 PF10672 S-adenosylmethionine-dependent methyltransferase OIO43_12210 PF02926 THUMP domain OIO43_12210 PF01170 Putative RNA methylase family UPF0020 OIO43_12225 PF02861 Clp amino terminal domain, pathogenicity island component OIO43_12225 PF00004 ATPase family associated with various cellular activities (AAA) OIO43_12225 PF10431 C-terminal, D2-small domain, of ClpB protein OIO43_12225 PF17871 AAA lid domain OIO43_12225 PF07724 AAA domain (Cdc48 subfamily) OIO43_12240 PF02566 OsmC-like protein OIO43_12250 PF13545 Crp-like helix-turn-helix domain OIO43_12250 PF00027 Cyclic nucleotide-binding domain OIO43_12255 PF00248 Aldo/keto reductase family OIO43_12270 PF00709 Adenylosuccinate synthetase OIO43_12275 PF13393 Histidyl-tRNA synthetase OIO43_12280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain OIO43_12280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain OIO43_12285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OIO43_12285 PF02272 DHHA1 domain OIO43_12285 PF01411 tRNA synthetases class II (A) OIO43_12300 PF13954 PapC N-terminal domain OIO43_12300 PF00577 Outer membrane usher protein OIO43_12300 PF13953 PapC C-terminal domain OIO43_12400 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system OIO43_12630 PF00696 Amino acid kinase family OIO43_12630 PF01842 ACT domain OIO43_12630 PF13840 ACT domain OIO43_12635 PF02599 Global regulator protein family OIO43_12640 PF01351 Ribonuclease HII OIO43_12650 PF01292 Prokaryotic cytochrome b561 OIO43_12655 PF00962 Adenosine/AMP deaminase OIO43_12660 PF00860 Permease family OIO43_12670 PF00743 Flavin-binding monooxygenase-like OIO43_12675 PF00106 short chain dehydrogenase OIO43_12685 PF17954 Quercetinase C-terminal cupin domain OIO43_12685 PF02678 Pirin OIO43_12690 PF00440 Bacterial regulatory proteins, tetR family OIO43_12690 PF17932 Tetracyclin repressor-like, C-terminal domain OIO43_12700 PF00106 short chain dehydrogenase OIO43_12705 PF00743 Flavin-binding monooxygenase-like OIO43_12710 PF04072 Leucine carboxyl methyltransferase OIO43_12715 PF12833 Helix-turn-helix domain OIO43_12715 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term OIO43_12720 PF00743 Flavin-binding monooxygenase-like OIO43_12725 PF00106 short chain dehydrogenase OIO43_12730 PF07859 alpha/beta hydrolase fold OIO43_12735 PF05199 GMC oxidoreductase OIO43_12740 PF03573 outer membrane porin, OprD family OIO43_12745 PF07690 Major Facilitator Superfamily OIO43_12750 PF00355 Rieske [2Fe-2S] domain OIO43_12755 PF00175 Oxidoreductase NAD-binding domain OIO43_12755 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO43_12770 PF07690 Major Facilitator Superfamily OIO43_12775 PF00378 Enoyl-CoA hydratase/isomerase OIO43_12780 PF00171 Aldehyde dehydrogenase family OIO43_12790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_12790 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_12790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_12795 PF03573 outer membrane porin, OprD family OIO43_12810 PF07519 Tannase and feruloyl esterase OIO43_12815 PF00392 Bacterial regulatory proteins, gntR family OIO43_12815 PF07729 FCD domain OIO43_12820 PF00171 Aldehyde dehydrogenase family OIO43_12825 PF00701 Dihydrodipicolinate synthetase family OIO43_12830 PF13378 Enolase C-terminal domain-like OIO43_12835 PF07690 Major Facilitator Superfamily OIO43_12840 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus OIO43_12840 PF08666 SAF domain OIO43_12845 PF00892 EamA-like transporter family OIO43_12850 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term OIO43_12850 PF12833 Helix-turn-helix domain OIO43_12855 PF00171 Aldehyde dehydrogenase family OIO43_12860 PF00324 Amino acid permease OIO43_12865 PF04958 Arginine N-succinyltransferase beta subunit OIO43_12870 PF00202 Aminotransferase class-III OIO43_12880 PF00171 Aldehyde dehydrogenase family OIO43_12890 PF00392 Bacterial regulatory proteins, gntR family OIO43_12890 PF07729 FCD domain OIO43_12900 PF00324 Amino acid permease OIO43_12905 PF01266 FAD dependent oxidoreductase OIO43_12910 PF00324 Amino acid permease OIO43_12945 PF03527 RHS protein OIO43_12945 PF05593 RHS Repeat OIO43_12950 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) OIO43_12950 PF04717 Type VI secretion system, phage-baseplate injector OIO43_12950 PF13296 Putative type VI secretion system Rhs element Vgr OIO43_12965 PF13276 HTH-like domain OIO43_12965 PF00665 Integrase core domain OIO43_12965 PF13333 Integrase core domain OIO43_12970 PF03180 NLPA lipoprotein OIO43_12975 PF03412 Peptidase C39 family OIO43_12975 PF00005 ABC transporter OIO43_12975 PF00664 ABC transporter transmembrane region OIO43_13005 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_13005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO43_13010 PF00764 Arginosuccinate synthase OIO43_13015 PF00360 Phytochrome region OIO43_13015 PF01590 GAF domain OIO43_13015 PF00990 Diguanylate cyclase, GGDEF domain OIO43_13015 PF00563 EAL domain OIO43_13020 PF01979 Amidohydrolase family OIO43_13025 PF00929 Exonuclease OIO43_13035 PF07715 TonB-dependent Receptor Plug Domain OIO43_13035 PF00593 TonB dependent receptor OIO43_13040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO43_13040 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_13045 PF00005 ABC transporter OIO43_13045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region OIO43_13050 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_13050 PF12911 N-terminal TM domain of oligopeptide transport permease C OIO43_13055 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_13060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle OIO43_13065 PF01476 LysM domain OIO43_13065 PF01464 Transglycosylase SLT domain OIO43_13065 PF01476 LysM domain OIO43_13065 PF01464 Transglycosylase SLT domain OIO43_13070 PF00929 Exonuclease OIO43_13080 PF00293 NUDIX domain OIO43_13080 PF09297 NADH pyrophosphatase zinc ribbon domain OIO43_13090 PF04972 BON domain OIO43_13095 PF02021 Uncharacterised protein family UPF0102 OIO43_13100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OIO43_13110 PF03466 LysR substrate binding domain OIO43_13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_13115 PF01810 LysE type translocator OIO43_13125 PF13411 MerR HTH family regulatory protein OIO43_13135 PF01494 FAD binding domain OIO43_13140 PF01494 FAD binding domain OIO43_13145 PF05195 Aminopeptidase P, N-terminal domain OIO43_13145 PF00557 Metallopeptidase family M24 OIO43_13185 PF01812 5-formyltetrahydrofolate cyclo-ligase family OIO43_13190 PF00691 OmpA family OIO43_13190 PF04355 SmpA / OmlA family OIO43_13195 PF05658 Head domain of trimeric autotransporter adhesin OIO43_13195 PF03895 YadA-like membrane anchor domain OIO43_13195 PF13018 Extended Signal Peptide of Type V secretion system OIO43_13195 PF05662 Coiled stalk of trimeric autotransporter adhesin OIO43_13195 PF03895 YadA-like membrane anchor domain OIO43_13195 PF05658 Head domain of trimeric autotransporter adhesin OIO43_13195 PF05662 Coiled stalk of trimeric autotransporter adhesin OIO43_13195 PF13018 Extended Signal Peptide of Type V secretion system OIO43_13200 PF00691 OmpA family OIO43_13200 PF04355 SmpA / OmlA family OIO43_13205 PF13018 Extended Signal Peptide of Type V secretion system OIO43_13205 PF03895 YadA-like membrane anchor domain OIO43_13205 PF05658 Head domain of trimeric autotransporter adhesin OIO43_13205 PF05662 Coiled stalk of trimeric autotransporter adhesin OIO43_13210 PF00004 ATPase family associated with various cellular activities (AAA) OIO43_13210 PF05362 Lon protease (S16) C-terminal proteolytic domain OIO43_13210 PF02190 ATP-dependent protease La (LON) substrate-binding domain OIO43_13215 PF02590 Predicted SPOUT methyltransferase OIO43_13220 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OIO43_13230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain OIO43_13230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase OIO43_13235 PF04060 Putative Fe-S cluster OIO43_13240 PF10576 Iron-sulfur binding domain of endonuclease III OIO43_13240 PF00633 Helix-hairpin-helix motif OIO43_13240 PF00730 HhH-GPD superfamily base excision DNA repair protein OIO43_13250 PF05191 Adenylate kinase, active site lid OIO43_13265 PF03717 Penicillin-binding Protein dimerisation domain OIO43_13265 PF00905 Penicillin binding protein transpeptidase domain OIO43_13280 PF02492 CobW/HypB/UreG, nucleotide-binding domain OIO43_13285 PF01730 UreF OIO43_13290 PF02814 UreE urease accessory protein, N-terminal domain OIO43_13290 PF05194 UreE urease accessory protein, C-terminal domain OIO43_13295 PF00449 Urease alpha-subunit, N-terminal domain OIO43_13295 PF01979 Amidohydrolase family OIO43_13300 PF00699 Urease beta subunit OIO43_13305 PF00547 Urease, gamma subunit OIO43_13310 PF01774 UreD urease accessory protein OIO43_13325 PF00463 Isocitrate lyase family OIO43_13330 PF03466 LysR substrate binding domain OIO43_13330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_13335 PF01595 Cyclin M transmembrane N-terminal domain OIO43_13335 PF03471 Transporter associated domain OIO43_13335 PF00571 CBS domain OIO43_13340 PF03600 Citrate transporter OIO43_13355 PF00009 Elongation factor Tu GTP binding domain OIO43_13360 PF01507 Phosphoadenosine phosphosulfate reductase family OIO43_13370 PF14052 Capsule assembly protein Wzi OIO43_13375 PF00152 tRNA synthetases class II (D, K and N) OIO43_13375 PF01336 OB-fold nucleic acid binding domain OIO43_13390 PF00301 Rubredoxin OIO43_13395 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_13395 PF18113 Rubredoxin binding C-terminal domain OIO43_13400 PF00561 alpha/beta hydrolase fold OIO43_13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_13405 PF03466 LysR substrate binding domain OIO43_13420 PF02503 Polyphosphate kinase middle domain OIO43_13420 PF13090 Polyphosphate kinase C-terminal domain 2 OIO43_13420 PF13089 Polyphosphate kinase N-terminal domain OIO43_13420 PF17941 Polyphosphate kinase C-terminal domain 1 OIO43_13425 PF00912 Transglycosylase OIO43_13430 PF01694 Rhomboid family OIO43_13440 PF00005 ABC transporter OIO43_13445 PF13472 GDSL-like Lipase/Acylhydrolase family OIO43_13450 PF00484 Carbonic anhydrase OIO43_13455 PF00561 alpha/beta hydrolase fold OIO43_13470 PF01521 Iron-sulphur cluster biosynthesis OIO43_13470 PF01106 NifU-like domain OIO43_13480 PF00884 Sulfatase OIO43_13485 PF03781 Sulfatase-modifying factor enzyme 1 OIO43_13500 PF00291 Pyridoxal-phosphate dependent enzyme OIO43_13505 PF01384 Phosphate transporter family OIO43_13510 PF02574 Homocysteine S-methyltransferase OIO43_13510 PF02310 B12 binding domain OIO43_13510 PF02607 B12 binding domain OIO43_13510 PF02965 Vitamin B12 dependent methionine synthase, activation domain OIO43_13510 PF00809 Pterin binding enzyme OIO43_13515 PF02780 Transketolase, C-terminal domain OIO43_13515 PF02779 Transketolase, pyrimidine binding domain OIO43_13520 PF00456 Transketolase, thiamine diphosphate binding domain OIO43_13525 PF07690 Major Facilitator Superfamily OIO43_13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_13535 PF03466 LysR substrate binding domain OIO43_13545 PF01263 Aldose 1-epimerase OIO43_13550 PF07690 Major Facilitator Superfamily OIO43_13555 PF12833 Helix-turn-helix domain OIO43_13555 PF02311 AraC-like ligand binding domain OIO43_13560 PF04960 Glutaminase OIO43_13565 PF01327 Polypeptide deformylase OIO43_13570 PF07690 Major Facilitator Superfamily OIO43_13580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OIO43_13580 PF00205 Thiamine pyrophosphate enzyme, central domain OIO43_13580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OIO43_13585 PF00171 Aldehyde dehydrogenase family OIO43_13590 PF01958 Domain of unknown function DUF108 OIO43_13590 PF03447 Homoserine dehydrogenase, NAD binding domain OIO43_13600 PF12697 Alpha/beta hydrolase family OIO43_13610 PF07690 Major Facilitator Superfamily OIO43_13615 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_13615 PF14759 Reductase C-terminal OIO43_13620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OIO43_13630 PF00355 Rieske [2Fe-2S] domain OIO43_13640 PF00355 Rieske [2Fe-2S] domain OIO43_13645 PF09339 IclR helix-turn-helix domain OIO43_13645 PF01614 Bacterial transcriptional regulator OIO43_13660 PF00378 Enoyl-CoA hydratase/isomerase OIO43_13670 PF00535 Glycosyl transferase family 2 OIO43_13675 PF14883 Hypothetical glycosyl hydrolase family 13 OIO43_13675 PF01522 Polysaccharide deacetylase OIO43_13680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO43_13685 PF07152 YaeQ protein OIO43_13690 PF00375 Sodium:dicarboxylate symporter family OIO43_13695 PF02492 CobW/HypB/UreG, nucleotide-binding domain OIO43_13695 PF07683 Cobalamin synthesis protein cobW C-terminal domain OIO43_13705 PF03061 Thioesterase superfamily OIO43_13715 PF02028 BCCT, betaine/carnitine/choline family transporter OIO43_13720 PF02028 BCCT, betaine/carnitine/choline family transporter OIO43_13725 PF13977 BetI-type transcriptional repressor, C-terminal OIO43_13725 PF00440 Bacterial regulatory proteins, tetR family OIO43_13730 PF00171 Aldehyde dehydrogenase family OIO43_13735 PF05199 GMC oxidoreductase OIO43_13735 PF00732 GMC oxidoreductase OIO43_13740 PF06039 Malate:quinone oxidoreductase (Mqo) OIO43_13750 PF02574 Homocysteine S-methyltransferase OIO43_13755 PF13520 Amino acid permease OIO43_13780 PF00701 Dihydrodipicolinate synthetase family OIO43_13785 PF00083 Sugar (and other) transporter OIO43_13825 PF07693 KAP family P-loop domain OIO43_13830 PF13936 Helix-turn-helix domain OIO43_13830 PF00665 Integrase core domain OIO43_13850 PF07690 Major Facilitator Superfamily OIO43_13855 PF13533 Biotin-lipoyl like OIO43_13860 PF03061 Thioesterase superfamily OIO43_13865 PF00490 Delta-aminolevulinic acid dehydratase OIO43_13870 PF01266 FAD dependent oxidoreductase OIO43_13875 PF08338 Domain of unknown function (DUF1731) OIO43_13875 PF01370 NAD dependent epimerase/dehydratase family OIO43_13895 PF00149 Calcineurin-like phosphoesterase OIO43_13895 PF12320 Type 5 capsule protein repressor C-terminal domain OIO43_13905 PF01168 Alanine racemase, N-terminal domain OIO43_13910 PF00437 Type II/IV secretion system protein OIO43_13915 PF00437 Type II/IV secretion system protein OIO43_13920 PF01475 Ferric uptake regulator family OIO43_13925 PF04355 SmpA / OmlA family OIO43_13930 PF03658 RnfH family Ubiquitin OIO43_13940 PF01814 Hemerythrin HHE cation binding domain OIO43_13945 PF13230 Glutamine amidotransferases class-II OIO43_13955 PF00696 Amino acid kinase family OIO43_13960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OIO43_13960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OIO43_13960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OIO43_13960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OIO43_13965 PF00692 dUTPase OIO43_13970 PF00580 UvrD/REP helicase N-terminal domain OIO43_13970 PF13361 UvrD-like helicase C-terminal domain OIO43_13975 PF13488 Glycine zipper OIO43_13975 PF00691 OmpA family OIO43_13980 PF01553 Acyltransferase OIO43_13990 PF03775 Septum formation inhibitor MinC, C-terminal domain OIO43_13995 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain OIO43_14000 PF03776 Septum formation topological specificity factor MinE OIO43_14015 PF01580 FtsK/SpoIIIE family OIO43_14015 PF13491 4TM region of DNA translocase FtsK/SpoIIIE OIO43_14015 PF17854 FtsK alpha domain OIO43_14015 PF09397 Ftsk gamma domain OIO43_14020 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_14025 PF03588 Leucyl/phenylalanyl-tRNA protein transferase OIO43_14030 PF04377 Arginine-tRNA-protein transferase, C terminus OIO43_14030 PF04376 Arginine-tRNA-protein transferase, N terminus OIO43_14035 PF00583 Acetyltransferase (GNAT) family OIO43_14050 PF00009 Elongation factor Tu GTP binding domain OIO43_14050 PF03144 Elongation factor Tu domain 2 OIO43_14050 PF03143 Elongation factor Tu C-terminal domain OIO43_14055 PF00679 Elongation factor G C-terminus OIO43_14055 PF14492 Elongation Factor G, domain II OIO43_14055 PF03764 Elongation factor G, domain IV OIO43_14055 PF00009 Elongation factor Tu GTP binding domain OIO43_14055 PF03144 Elongation factor Tu domain 2 OIO43_14060 PF00177 Ribosomal protein S7p/S5e OIO43_14065 PF00164 Ribosomal protein S12/S23 OIO43_14075 PF00109 Beta-ketoacyl synthase, N-terminal domain OIO43_14075 PF02801 Beta-ketoacyl synthase, C-terminal domain OIO43_14080 PF03653 Uncharacterised protein family (UPF0093) OIO43_14085 PF02678 Pirin OIO43_14085 PF05726 Pirin C-terminal cupin domain OIO43_14095 PF00795 Carbon-nitrogen hydrolase OIO43_14095 PF02540 NAD synthase OIO43_14110 PF00175 Oxidoreductase NAD-binding domain OIO43_14110 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO43_14110 PF00970 Oxidoreductase FAD-binding domain OIO43_14115 PF00171 Aldehyde dehydrogenase family OIO43_14120 PF00355 Rieske [2Fe-2S] domain OIO43_14120 PF00848 Ring hydroxylating alpha subunit (catalytic domain) OIO43_14125 PF07859 alpha/beta hydrolase fold OIO43_14130 PF02028 BCCT, betaine/carnitine/choline family transporter OIO43_14135 PF00180 Isocitrate/isopropylmalate dehydrogenase OIO43_14140 PF03466 LysR substrate binding domain OIO43_14140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_14160 PF00037 4Fe-4S binding domain OIO43_14165 PF01467 Cytidylyltransferase-like OIO43_14170 PF01668 SmpB protein OIO43_14175 PF03358 NADPH-dependent FMN reductase OIO43_14180 PF02578 Multi-copper polyphenol oxidoreductase laccase OIO43_14185 PF00849 RNA pseudouridylate synthase OIO43_14185 PF01479 S4 domain OIO43_14190 PF13525 Outer membrane lipoprotein OIO43_14195 PF10410 DnaB-helicase binding domain of primase OIO43_14195 PF08278 DNA primase DnaG DnaB-binding OIO43_14195 PF08275 DNA primase catalytic core, N-terminal domain OIO43_14195 PF01807 CHC2 zinc finger OIO43_14200 PF01488 Shikimate / quinate 5-dehydrogenase OIO43_14200 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain OIO43_14200 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain OIO43_14210 PF03550 Outer membrane lipoprotein LolB OIO43_14215 PF08544 GHMP kinases C terminal OIO43_14215 PF00288 GHMP kinases N terminal domain OIO43_14240 PF14572 Phosphoribosyl synthetase-associated domain OIO43_14240 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase OIO43_14245 PF01386 Ribosomal L25p family OIO43_14250 PF01195 Peptidyl-tRNA hydrolase OIO43_14255 PF02261 Aspartate decarboxylase OIO43_14270 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase OIO43_14280 PF02581 Thiamine monophosphate synthase OIO43_14280 PF03070 TENA/THI-4/PQQC family OIO43_14280 PF08543 Phosphomethylpyrimidine kinase OIO43_14285 PF01476 LysM domain OIO43_14285 PF04972 BON domain OIO43_14290 PF00550 Phosphopantetheine attachment site OIO43_14300 PF00698 Acyl transferase domain OIO43_14305 PF01783 Ribosomal L32p protein family OIO43_14310 PF02620 Large ribosomal RNA subunit accumulation protein YceD OIO43_14315 PF04315 Elongation factor P hydroxylase OIO43_14320 PF01300 Telomere recombination OIO43_14325 PF02616 Segregation and condensation protein ScpA OIO43_14330 PF04079 Segregation and condensation complex subunit ScpB OIO43_14335 PF01479 S4 domain OIO43_14335 PF00849 RNA pseudouridylate synthase OIO43_14350 PF00155 Aminotransferase class I and II OIO43_14355 PF00202 Aminotransferase class-III OIO43_14355 PF06968 Biotin and Thiamin Synthesis associated domain OIO43_14355 PF04055 Radical SAM superfamily OIO43_14360 PF12697 Alpha/beta hydrolase family OIO43_14360 PF08241 Methyltransferase domain OIO43_14365 PF02358 Trehalose-phosphatase OIO43_14370 PF00982 Glycosyltransferase family 20 OIO43_14375 PF07690 Major Facilitator Superfamily OIO43_14380 PF00210 Ferritin-like domain OIO43_14385 PF03120 NAD-dependent DNA ligase OB-fold domain OIO43_14385 PF00533 BRCA1 C Terminus (BRCT) domain OIO43_14385 PF01653 NAD-dependent DNA ligase adenylation domain OIO43_14385 PF03119 NAD-dependent DNA ligase C4 zinc finger domain OIO43_14385 PF12826 Helix-hairpin-helix motif OIO43_14395 PF06470 SMC proteins Flexible Hinge Domain OIO43_14395 PF02463 RecF/RecN/SMC N terminal domain OIO43_14405 PF01925 Sulfite exporter TauE/SafE OIO43_14415 PF03309 Type III pantothenate kinase OIO43_14420 PF00448 SRP54-type protein, GTPase domain OIO43_14420 PF02881 SRP54-type protein, helical bundle domain OIO43_14420 PF02978 Signal peptide binding domain OIO43_14430 PF01207 Dihydrouridine synthase (Dus) OIO43_14460 PF00692 dUTPase OIO43_14475 PF01048 Phosphorylase superfamily OIO43_14480 PF10609 NUBPL iron-transfer P-loop NTPase OIO43_14490 PF09334 tRNA synthetases class I (M) OIO43_14490 PF01588 Putative tRNA binding domain OIO43_14515 PF13533 Biotin-lipoyl like OIO43_14520 PF00291 Pyridoxal-phosphate dependent enzyme OIO43_14535 PF05552 Conserved TM helix OIO43_14550 PF00175 Oxidoreductase NAD-binding domain OIO43_14550 PF00970 Oxidoreductase FAD-binding domain OIO43_14555 PF03466 LysR substrate binding domain OIO43_14555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_14565 PF00313 'Cold-shock' DNA-binding domain OIO43_14575 PF00361 Proton-conducting membrane transporter OIO43_14580 PF00361 Proton-conducting membrane transporter OIO43_14585 PF00361 Proton-conducting membrane transporter OIO43_14585 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OIO43_14590 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OIO43_14595 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 OIO43_14600 PF12838 4Fe-4S dicluster domain OIO43_14605 PF00146 NADH dehydrogenase OIO43_14610 PF00384 Molybdopterin oxidoreductase OIO43_14610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain OIO43_14610 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region OIO43_14615 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit OIO43_14615 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region OIO43_14615 PF10531 SLBB domain OIO43_14625 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit OIO43_14625 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit OIO43_14630 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit OIO43_14635 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 OIO43_14640 PF17151 Periplasmic sensor domain OIO43_14640 PF00990 Diguanylate cyclase, GGDEF domain OIO43_14650 PF00512 His Kinase A (phospho-acceptor) domain OIO43_14650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_14650 PF00672 HAMP domain OIO43_14655 PF00486 Transcriptional regulatory protein, C terminal OIO43_14655 PF00072 Response regulator receiver domain OIO43_14665 PF03477 ATP cone domain OIO43_14665 PF02867 Ribonucleotide reductase, barrel domain OIO43_14665 PF00317 Ribonucleotide reductase, all-alpha domain OIO43_14675 PF00268 Ribonucleotide reductase, small chain OIO43_14690 PF17074 Darcynin, domain of unknown function OIO43_14695 PF07693 KAP family P-loop domain OIO43_14705 PF01613 Flavin reductase like domain OIO43_14710 PF08267 Cobalamin-independent synthase, N-terminal domain OIO43_14710 PF01717 Cobalamin-independent synthase, Catalytic domain OIO43_14720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_14720 PF03466 LysR substrate binding domain OIO43_14725 PF01810 LysE type translocator OIO43_14730 PF03466 LysR substrate binding domain OIO43_14730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_14735 PF07690 Major Facilitator Superfamily OIO43_14745 PF03466 LysR substrate binding domain OIO43_14745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_14750 PF00890 FAD binding domain OIO43_14750 PF14537 Cytochrome c3 OIO43_14765 PF00440 Bacterial regulatory proteins, tetR family OIO43_14765 PF17932 Tetracyclin repressor-like, C-terminal domain OIO43_14770 PF02515 CoA-transferase family III OIO43_14775 PF07690 Major Facilitator Superfamily OIO43_14780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_14780 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_14780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_14785 PF03466 LysR substrate binding domain OIO43_14790 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_14790 PF00107 Zinc-binding dehydrogenase OIO43_14795 PF00962 Adenosine/AMP deaminase OIO43_14820 PF02445 Quinolinate synthetase A protein OIO43_14825 PF01960 ArgJ family OIO43_14830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain OIO43_14830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OIO43_14835 PF00893 Small Multidrug Resistance protein OIO43_14850 PF00394 Multicopper oxidase OIO43_14850 PF07731 Multicopper oxidase OIO43_14850 PF07732 Multicopper oxidase OIO43_14865 PF00834 Ribulose-phosphate 3 epimerase family OIO43_14875 PF00756 Putative esterase OIO43_14885 PF04445 Putative SAM-dependent methyltransferase OIO43_14890 PF00814 Glycoprotease family OIO43_14895 PF00132 Bacterial transferase hexapeptide (six repeats) OIO43_14900 PF00293 NUDIX domain OIO43_14925 PF13936 Helix-turn-helix domain OIO43_14925 PF00665 Integrase core domain OIO43_14950 PF04715 Anthranilate synthase component I, N terminal region OIO43_14950 PF00425 chorismate binding enzyme OIO43_14955 PF00155 Aminotransferase class I and II OIO43_14960 PF00815 Histidinol dehydrogenase OIO43_14965 PF01634 ATP phosphoribosyltransferase OIO43_14970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OIO43_14975 PF01722 BolA-like protein OIO43_14980 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein OIO43_14985 PF00309 Sigma-54 factor, Activator interacting domain (AID) OIO43_14985 PF04552 Sigma-54, DNA binding domain OIO43_14985 PF04963 Sigma-54 factor, core binding domain OIO43_15030 PF00795 Carbon-nitrogen hydrolase OIO43_15040 PF01047 MarR family OIO43_15045 PF02566 OsmC-like protein OIO43_15050 PF00437 Type II/IV secretion system protein OIO43_15070 PF01367 5'-3' exonuclease, C-terminal SAM fold OIO43_15070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OIO43_15070 PF01612 3'-5' exonuclease OIO43_15070 PF00476 DNA polymerase family A OIO43_15075 PF02325 YGGT family OIO43_15080 PF14748 Pyrroline-5-carboxylate reductase dimerisation OIO43_15080 PF03807 NADP oxidoreductase coenzyme F420-dependent OIO43_15085 PF01171 PP-loop family OIO43_15085 PF09179 TilS substrate binding domain OIO43_15085 PF11734 TilS substrate C-terminal domain OIO43_15090 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit OIO43_15095 PF02541 Ppx/GppA phosphatase family OIO43_15100 PF00085 Thioredoxin OIO43_15105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OIO43_15105 PF07498 Rho termination factor, N-terminal domain OIO43_15105 PF07497 Rho termination factor, RNA-binding domain OIO43_15120 PF00216 Bacterial DNA-binding protein OIO43_15125 PF03483 B3/4 domain OIO43_15125 PF03484 tRNA synthetase B5 domain OIO43_15125 PF03147 Ferredoxin-fold anticodon binding domain OIO43_15125 PF01588 Putative tRNA binding domain OIO43_15125 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain OIO43_15130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain OIO43_15130 PF01409 tRNA synthetases class II core domain (F) OIO43_15150 PF00453 Ribosomal protein L20 OIO43_15155 PF01632 Ribosomal protein L35 OIO43_15165 PF07690 Major Facilitator Superfamily OIO43_15170 PF09335 SNARE associated Golgi protein OIO43_15175 PF00043 Glutathione S-transferase, C-terminal domain OIO43_15175 PF02798 Glutathione S-transferase, N-terminal domain OIO43_15180 PF00707 Translation initiation factor IF-3, C-terminal domain OIO43_15180 PF05198 Translation initiation factor IF-3, N-terminal domain OIO43_15185 PF03129 Anticodon binding domain OIO43_15185 PF02824 TGS domain OIO43_15185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OIO43_15185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OIO43_15190 PF00501 AMP-binding enzyme OIO43_15190 PF13193 AMP-binding enzyme C-terminal domain OIO43_15195 PF04751 Protein of unknown function (DUF615) OIO43_15200 PF00381 PTS HPr component phosphorylation site OIO43_15205 PF03668 P-loop ATPase protein family OIO43_15210 PF02569 Pantoate-beta-alanine ligase OIO43_15215 PF02548 Ketopantoate hydroxymethyltransferase OIO43_15220 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) OIO43_15225 PF01743 Poly A polymerase head domain OIO43_15225 PF12626 Polymerase A arginine-rich C-terminus OIO43_15225 PF12627 Probable RNA and SrmB- binding site of polymerase A OIO43_15235 PF03819 MazG nucleotide pyrophosphohydrolase domain OIO43_15245 PF13291 ACT domain OIO43_15245 PF04607 Region found in RelA / SpoT proteins OIO43_15245 PF02824 TGS domain OIO43_15250 PF05958 tRNA (Uracil-5-)-methyltransferase OIO43_15260 PF00291 Pyridoxal-phosphate dependent enzyme OIO43_15265 PF01627 Hpt domain OIO43_15265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OIO43_15265 PF00072 Response regulator receiver domain OIO43_15265 PF00512 His Kinase A (phospho-acceptor) domain OIO43_15265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_15265 PF00672 HAMP domain OIO43_15270 PF00378 Enoyl-CoA hydratase/isomerase OIO43_15275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OIO43_15275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OIO43_15280 PF01261 Xylose isomerase-like TIM barrel OIO43_15290 PF00106 short chain dehydrogenase OIO43_15295 PF02233 NAD(P) transhydrogenase beta subunit OIO43_15300 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch OIO43_15305 PF01262 Alanine dehydrogenase/PNT, C-terminal domain OIO43_15305 PF05222 Alanine dehydrogenase/PNT, N-terminal domain OIO43_15310 PF00892 EamA-like transporter family OIO43_15320 PF07690 Major Facilitator Superfamily OIO43_15325 PF01207 Dihydrouridine synthase (Dus) OIO43_15335 PF03466 LysR substrate binding domain OIO43_15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_15345 PF00899 ThiF family OIO43_15350 PF00330 Aconitase family (aconitate hydratase) OIO43_15350 PF00694 Aconitase C-terminal domain OIO43_15355 PF01026 TatD related DNase OIO43_15370 PF00009 Elongation factor Tu GTP binding domain OIO43_15370 PF03144 Elongation factor Tu domain 2 OIO43_15370 PF16658 Class II release factor RF3, C-terminal domain OIO43_15385 PF04151 Bacterial pre-peptidase C-terminal domain OIO43_15395 PF16884 N-terminal domain of oxidoreductase OIO43_15395 PF00107 Zinc-binding dehydrogenase OIO43_15400 PF16925 Tetracyclin repressor-like, C-terminal domain OIO43_15400 PF00440 Bacterial regulatory proteins, tetR family OIO43_15410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO43_15420 PF00465 Iron-containing alcohol dehydrogenase OIO43_15435 PF00756 Putative esterase OIO43_15440 PF00107 Zinc-binding dehydrogenase OIO43_15440 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_15450 PF14765 Polyketide synthase dehydratase OIO43_15450 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_15450 PF08659 KR domain OIO43_15450 PF00698 Acyl transferase domain OIO43_15450 PF00109 Beta-ketoacyl synthase, N-terminal domain OIO43_15450 PF16197 Ketoacyl-synthetase C-terminal extension OIO43_15450 PF02801 Beta-ketoacyl synthase, C-terminal domain OIO43_15450 PF00550 Phosphopantetheine attachment site OIO43_15455 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_15455 PF00107 Zinc-binding dehydrogenase OIO43_15460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_15460 PF03466 LysR substrate binding domain OIO43_15465 PF00106 short chain dehydrogenase OIO43_15470 PF00107 Zinc-binding dehydrogenase OIO43_15470 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_15570 PF00990 Diguanylate cyclase, GGDEF domain OIO43_15570 PF03707 Bacterial signalling protein N terminal repeat OIO43_15570 PF00563 EAL domain OIO43_15575 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain OIO43_15575 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain OIO43_15580 PF10369 Small subunit of acetolactate synthase OIO43_15585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OIO43_15585 PF00205 Thiamine pyrophosphate enzyme, central domain OIO43_15585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OIO43_15595 PF13603 Leucyl-tRNA synthetase, Domain 2 OIO43_15595 PF00133 tRNA synthetases class I (I, L, M and V) OIO43_15595 PF09334 tRNA synthetases class I (M) OIO43_15595 PF08264 Anticodon-binding domain of tRNA OIO43_15610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO43_15615 PF00005 ABC transporter OIO43_15615 PF12704 MacB-like periplasmic core domain OIO43_15615 PF02687 FtsX-like permease family OIO43_15620 PF02321 Outer membrane efflux protein OIO43_15635 PF00929 Exonuclease OIO43_15640 PF03193 RsgA GTPase OIO43_15650 PF00462 Glutaredoxin OIO43_15655 PF02556 Preprotein translocase subunit SecB OIO43_15660 PF01648 4'-phosphopantetheinyl transferase superfamily OIO43_15665 PF01926 50S ribosome-binding GTPase OIO43_15665 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal OIO43_15670 PF13360 PQQ-like domain OIO43_15680 PF13393 Histidyl-tRNA synthetase OIO43_15680 PF03129 Anticodon binding domain OIO43_15685 PF04551 GcpE protein OIO43_15690 PF13464 Domain of unknown function (DUF4115) OIO43_15700 PF04055 Radical SAM superfamily OIO43_15705 PF00334 Nucleoside diphosphate kinase OIO43_15710 PF04384 Iron-sulphur cluster assembly OIO43_15715 PF01569 PAP2 superfamily OIO43_15720 PF13439 Glycosyltransferase Family 4 OIO43_15720 PF00534 Glycosyl transferases group 1 OIO43_15725 PF11818 C-terminal domain of tail specific protease (DUF3340) OIO43_15725 PF00595 PDZ domain OIO43_15725 PF03572 Peptidase family S41 OIO43_15725 PF17804 Tail specific protease N-terminal domain OIO43_15730 PF00933 Glycosyl hydrolase family 3 N terminal domain OIO43_15740 PF00561 alpha/beta hydrolase fold OIO43_15745 PF00171 Aldehyde dehydrogenase family OIO43_15750 PF00171 Aldehyde dehydrogenase family OIO43_15755 PF01202 Shikimate kinase OIO43_15760 PF02447 GntP family permease OIO43_15765 PF01081 KDPG and KHG aldolase OIO43_15770 PF00920 Dehydratase family OIO43_15775 PF00871 Acetokinase family OIO43_15780 PF07085 DRTGG domain OIO43_15780 PF01515 Phosphate acetyl/butaryl transferase OIO43_15785 PF05683 Fumarase C-terminus OIO43_15785 PF05681 Fumarate hydratase (Fumerase) OIO43_15800 PF07724 AAA domain (Cdc48 subfamily) OIO43_15800 PF10431 C-terminal, D2-small domain, of ClpB protein OIO43_15800 PF06689 ClpX C4-type zinc finger OIO43_15805 PF00574 Clp protease OIO43_15810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO43_15810 PF05697 Bacterial trigger factor protein (TF) OIO43_15810 PF05698 Bacterial trigger factor protein (TF) C-terminus OIO43_15815 PF07715 TonB-dependent Receptor Plug Domain OIO43_15815 PF00593 TonB dependent receptor OIO43_15820 PF13640 2OG-Fe(II) oxygenase superfamily OIO43_15820 PF18331 PKHD-type hydroxylase C-terminal domain OIO43_15825 PF00682 HMGL-like OIO43_15825 PF08502 LeuA allosteric (dimerisation) domain OIO43_15830 PF00561 alpha/beta hydrolase fold OIO43_15835 PF00561 alpha/beta hydrolase fold OIO43_15835 PF07021 Methionine biosynthesis protein MetW OIO43_15845 PF01725 Ham1 family OIO43_15855 PF02416 mttA/Hcf106 family OIO43_15860 PF02416 mttA/Hcf106 family OIO43_15865 PF00902 Sec-independent protein translocase protein (TatC) OIO43_15885 PF01790 Prolipoprotein diacylglyceryl transferase OIO43_15900 PF00303 Thymidylate synthase OIO43_15905 PF00186 Dihydrofolate reductase OIO43_15915 PF01625 Peptide methionine sulfoxide reductase OIO43_15925 PF01618 MotA/TolQ/ExbB proton channel family OIO43_15935 PF01842 ACT domain OIO43_15935 PF00551 Formyl transferase OIO43_15945 PF00171 Aldehyde dehydrogenase family OIO43_15950 PF00830 Ribosomal L28 family OIO43_15955 PF00471 Ribosomal protein L33 OIO43_15960 PF00999 Sodium/hydrogen exchanger family OIO43_15960 PF02254 TrkA-N domain OIO43_15980 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) OIO43_15985 PF00580 UvrD/REP helicase N-terminal domain OIO43_15985 PF13361 UvrD-like helicase C-terminal domain OIO43_16000 PF08272 Topoisomerase I zinc-ribbon-like OIO43_16000 PF01751 Toprim domain OIO43_16000 PF01396 Topoisomerase DNA binding C4 zinc finger OIO43_16000 PF01131 DNA topoisomerase OIO43_16010 PF01638 HxlR-like helix-turn-helix OIO43_16015 PF08240 Alcohol dehydrogenase GroES-like domain OIO43_16015 PF00107 Zinc-binding dehydrogenase OIO43_16020 PF04102 SlyX OIO43_16025 PF00005 ABC transporter OIO43_16025 PF12848 ABC transporter OIO43_16025 PF16326 ABC transporter C-terminal domain OIO43_16045 PF01810 LysE type translocator OIO43_16050 PF03279 Bacterial lipid A biosynthesis acyltransferase OIO43_16060 PF00375 Sodium:dicarboxylate symporter family OIO43_16070 PF01118 Semialdehyde dehydrogenase, NAD binding domain OIO43_16070 PF02774 Semialdehyde dehydrogenase, dimerisation domain OIO43_16090 PF01416 tRNA pseudouridine synthase OIO43_16100 PF01176 Translation initiation factor 1A / IF-1 OIO43_16115 PF00180 Isocitrate/isopropylmalate dehydrogenase OIO43_16125 PF00694 Aconitase C-terminal domain OIO43_16130 PF00330 Aconitase family (aconitate hydratase) OIO43_16140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_16140 PF03466 LysR substrate binding domain OIO43_16150 PF00293 NUDIX domain OIO43_16155 PF01590 GAF domain OIO43_16155 PF05524 PEP-utilising enzyme, N-terminal OIO43_16155 PF02896 PEP-utilising enzyme, TIM barrel domain OIO43_16155 PF00391 PEP-utilising enzyme, mobile domain OIO43_16160 PF00141 Peroxidase OIO43_16165 PF12706 Beta-lactamase superfamily domain OIO43_16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_16170 PF03466 LysR substrate binding domain OIO43_16180 PF02798 Glutathione S-transferase, N-terminal domain OIO43_16185 PF08279 HTH domain OIO43_16185 PF13280 WYL domain OIO43_16190 PF13419 Haloacid dehalogenase-like hydrolase OIO43_16195 PF00849 RNA pseudouridylate synthase OIO43_16195 PF01479 S4 domain OIO43_16200 PF12111 Polyribonucleotide phosphorylase C terminal OIO43_16200 PF10150 Ribonuclease E/G family OIO43_16200 PF00575 S1 RNA binding domain OIO43_16205 PF00501 AMP-binding enzyme OIO43_16205 PF13193 AMP-binding enzyme C-terminal domain OIO43_16220 PF03466 LysR substrate binding domain OIO43_16220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_16230 PF06969 HemN C-terminal domain OIO43_16230 PF04055 Radical SAM superfamily OIO43_16240 PF01554 MatE OIO43_16245 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_16245 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OIO43_16245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_16250 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OIO43_16250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_16255 PF03109 ABC1 family OIO43_16260 PF01197 Ribosomal protein L31 OIO43_16270 PF02537 CrcB-like protein, Camphor Resistance (CrcB) OIO43_16280 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO43_16280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster OIO43_16280 PF13247 4Fe-4S dicluster domain OIO43_16290 PF03884 DNA gyrase inhibitor YacG OIO43_16295 PF00753 Metallo-beta-lactamase superfamily OIO43_16300 PF00762 Ferrochelatase OIO43_16310 PF01177 Asp/Glu/Hydantoin racemase OIO43_16330 PF01206 Sulfurtransferase TusA OIO43_16335 PF00571 CBS domain OIO43_16335 PF03471 Transporter associated domain OIO43_16340 PF00795 Carbon-nitrogen hydrolase OIO43_16345 PF01588 Putative tRNA binding domain OIO43_16355 PF07963 Prokaryotic N-terminal methylation motif OIO43_16355 PF08334 Type II secretion system (T2SS), protein G OIO43_16360 PF00482 Type II secretion system (T2SS), protein F OIO43_16365 PF18074 Primosomal protein N C-terminal domain OIO43_16365 PF00270 DEAD/DEAH box helicase OIO43_16365 PF00271 Helicase conserved C-terminal domain OIO43_16365 PF17764 3′ DNA-binding domain (3′BD) OIO43_16365 PF18319 PriA DNA helicase Cys-rich region (CRR) domain OIO43_16370 PF02254 TrkA-N domain OIO43_16370 PF00999 Sodium/hydrogen exchanger family OIO43_16375 PF01430 Hsp33 protein OIO43_16385 PF01556 DnaJ C terminal domain OIO43_16385 PF00226 DnaJ domain OIO43_16395 PF01544 CorA-like Mg2+ transporter protein OIO43_16400 PF03725 3' exoribonuclease family, domain 2 OIO43_16400 PF00575 S1 RNA binding domain OIO43_16400 PF01138 3' exoribonuclease family, domain 1 OIO43_16400 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain OIO43_16400 PF00013 KH domain OIO43_16405 PF00312 Ribosomal protein S15 OIO43_16410 PF00144 Beta-lactamase OIO43_16415 PF13538 UvrD-like helicase C-terminal domain OIO43_16420 PF13361 UvrD-like helicase C-terminal domain OIO43_16420 PF00580 UvrD/REP helicase N-terminal domain OIO43_16420 PF12705 PD-(D/E)XK nuclease superfamily OIO43_16425 PF17946 RecC C-terminal domain OIO43_16435 PF03976 Polyphosphate kinase 2 (PPK2) OIO43_16445 PF01209 ubiE/COQ5 methyltransferase family OIO43_16455 PF03109 ABC1 family OIO43_16460 PF01494 FAD binding domain OIO43_16465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OIO43_16475 PF01502 Phosphoribosyl-AMP cyclohydrolase OIO43_16490 PF13244 Domain of unknown function (DUF4040) OIO43_16490 PF00361 Proton-conducting membrane transporter OIO43_16490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OIO43_16490 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter OIO43_16495 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OIO43_16500 PF00361 Proton-conducting membrane transporter OIO43_16505 PF01899 Na+/H+ ion antiporter subunit OIO43_16510 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) OIO43_16515 PF03334 Na+/H+ antiporter subunit OIO43_16520 PF02033 Ribosome-binding factor A OIO43_16525 PF00009 Elongation factor Tu GTP binding domain OIO43_16525 PF11987 Translation-initiation factor 2 OIO43_16525 PF08364 Bacterial translation initiation factor IF-2 associated region OIO43_16525 PF04760 Translation initiation factor IF-2, N-terminal region OIO43_16530 PF13184 NusA-like KH domain OIO43_16530 PF00575 S1 RNA binding domain OIO43_16530 PF08529 NusA N-terminal domain OIO43_16535 PF02576 RimP N-terminal domain OIO43_16535 PF17384 RimP C-terminal SH3 domain OIO43_16555 PF03840 Preprotein translocase SecG subunit OIO43_16560 PF00121 Triosephosphate isomerase OIO43_16565 PF00437 Type II/IV secretion system protein OIO43_16565 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OIO43_16570 PF00482 Type II secretion system (T2SS), protein F OIO43_16575 PF06750 Bacterial Peptidase A24 N-terminal domain OIO43_16575 PF01478 Type IV leader peptidase family OIO43_16580 PF01121 Dephospho-CoA kinase OIO43_16590 PF00588 SpoU rRNA Methylase family OIO43_16590 PF08032 RNA 2'-O ribose methyltransferase substrate binding OIO43_16595 PF06865 Pyrimidine/purine nucleoside phosphorylase OIO43_16605 PF02463 RecF/RecN/SMC N terminal domain OIO43_16610 PF02622 Uncharacterized ACR, COG1678 OIO43_16615 PF03652 Holliday junction resolvase OIO43_16620 PF13533 Biotin-lipoyl like OIO43_16645 PF02805 Metal binding domain of Ada OIO43_16645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OIO43_16645 PF12833 Helix-turn-helix domain OIO43_16645 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain OIO43_16650 PF01066 CDP-alcohol phosphatidyltransferase OIO43_16660 PF08459 UvrC Helix-hairpin-helix N-terminal OIO43_16660 PF02151 UvrB/uvrC motif OIO43_16660 PF01541 GIY-YIG catalytic domain OIO43_16685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OIO43_16685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OIO43_16685 PF00378 Enoyl-CoA hydratase/isomerase OIO43_16690 PF00108 Thiolase, N-terminal domain OIO43_16690 PF02803 Thiolase, C-terminal domain OIO43_16705 PF00376 MerR family regulatory protein OIO43_16705 PF09278 MerR, DNA binding OIO43_16715 PF01323 DSBA-like thioredoxin domain OIO43_16730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_16730 PF00183 Hsp90 protein OIO43_16745 PF13726 Na+-H+ antiporter family OIO43_16745 PF03553 Na+/H+ antiporter family OIO43_16750 PF00561 alpha/beta hydrolase fold OIO43_16770 PF04997 RNA polymerase Rpb1, domain 1 OIO43_16770 PF04983 RNA polymerase Rpb1, domain 3 OIO43_16770 PF05000 RNA polymerase Rpb1, domain 4 OIO43_16770 PF04998 RNA polymerase Rpb1, domain 5 OIO43_16770 PF00623 RNA polymerase Rpb1, domain 2 OIO43_16775 PF04560 RNA polymerase Rpb2, domain 7 OIO43_16775 PF04563 RNA polymerase beta subunit OIO43_16775 PF04561 RNA polymerase Rpb2, domain 2 OIO43_16775 PF04565 RNA polymerase Rpb2, domain 3 OIO43_16775 PF10385 RNA polymerase beta subunit external 1 domain OIO43_16775 PF00562 RNA polymerase Rpb2, domain 6 OIO43_16780 PF00542 Ribosomal protein L7/L12 C-terminal domain OIO43_16780 PF16320 Ribosomal protein L7/L12 dimerisation domain OIO43_16785 PF00466 Ribosomal protein L10 OIO43_16790 PF00687 Ribosomal protein L1p/L10e family OIO43_16795 PF03946 Ribosomal protein L11, N-terminal domain OIO43_16795 PF00298 Ribosomal protein L11, RNA binding domain OIO43_16800 PF02357 Transcription termination factor nusG OIO43_16800 PF00467 KOW motif OIO43_16805 PF00584 SecE/Sec61-gamma subunits of protein translocation complex OIO43_16815 PF03144 Elongation factor Tu domain 2 OIO43_16815 PF03143 Elongation factor Tu C-terminal domain OIO43_16815 PF00009 Elongation factor Tu GTP binding domain OIO43_16840 PF00425 chorismate binding enzyme OIO43_16840 PF04715 Anthranilate synthase component I, N terminal region OIO43_16845 PF13419 Haloacid dehalogenase-like hydrolase OIO43_16850 PF00498 FHA domain OIO43_16850 PF12401 Protein of unknown function (DUF2662) OIO43_16855 PF03958 Bacterial type II/III secretion system short domain OIO43_16855 PF00263 Bacterial type II and III secretion system protein OIO43_16870 PF00816 H-NS histone family OIO43_16880 PF13936 Helix-turn-helix domain OIO43_16880 PF00665 Integrase core domain OIO43_16905 PF03900 Porphobilinogen deaminase, C-terminal domain OIO43_16905 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain OIO43_16910 PF04397 LytTr DNA-binding domain OIO43_16910 PF00072 Response regulator receiver domain OIO43_16915 PF07694 5TMR of 5TMR-LYT OIO43_16915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_16915 PF06580 Histidine kinase OIO43_16920 PF14698 Argininosuccinate lyase C-terminal OIO43_16920 PF00206 Lyase OIO43_16925 PF04362 Bacterial Fe(2+) trafficking OIO43_16930 PF01895 PhoU domain OIO43_16935 PF02321 Outer membrane efflux protein OIO43_16940 PF00892 EamA-like transporter family OIO43_16955 PF01964 Radical SAM ThiC family OIO43_16955 PF13667 ThiC-associated domain OIO43_16960 PF00293 NUDIX domain OIO43_16965 PF00149 Calcineurin-like phosphoesterase OIO43_16970 PF01258 Prokaryotic dksA/traR C4-type zinc finger OIO43_16975 PF00749 tRNA synthetases class I (E and Q), catalytic domain OIO43_16980 PF01098 Cell cycle protein OIO43_16985 PF02875 Mur ligase family, glutamate ligase domain OIO43_16985 PF08245 Mur ligase middle domain OIO43_16995 PF07670 Nucleoside recognition OIO43_16995 PF02421 Ferrous iron transport protein B OIO43_16995 PF07664 Ferrous iron transport protein B C terminus OIO43_17005 PF02899 Phage integrase, N-terminal SAM-like domain OIO43_17005 PF00589 Phage integrase family OIO43_17010 PF13098 Thioredoxin-like domain OIO43_17010 PF10411 Disulfide bond isomerase protein N-terminus OIO43_17015 PF00742 Homoserine dehydrogenase OIO43_17015 PF03447 Homoserine dehydrogenase, NAD binding domain OIO43_17015 PF01842 ACT domain OIO43_17020 PF00291 Pyridoxal-phosphate dependent enzyme OIO43_17025 PF00768 D-alanyl-D-alanine carboxypeptidase OIO43_17030 PF00196 Bacterial regulatory proteins, luxR family OIO43_17030 PF00072 Response regulator receiver domain OIO43_17035 PF00512 His Kinase A (phospho-acceptor) domain OIO43_17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO43_17040 PF02954 Bacterial regulatory protein, Fis family OIO43_17040 PF00158 Sigma-54 interaction domain OIO43_17040 PF00072 Response regulator receiver domain OIO43_17045 PF00595 PDZ domain OIO43_17045 PF03572 Peptidase family S41 OIO43_17050 PF06415 BPG-independent PGAM N-terminus (iPGM_N) OIO43_17050 PF01676 Metalloenzyme superfamily OIO43_17055 PF03739 Lipopolysaccharide export system permease LptF/LptG OIO43_17065 PF00883 Cytosol aminopeptidase family, catalytic domain OIO43_17065 PF02789 Cytosol aminopeptidase family, N-terminal domain OIO43_17085 PF00677 Lumazine binding domain OIO43_17095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region OIO43_17095 PF01872 RibD C-terminal domain OIO43_17100 PF03477 ATP cone domain OIO43_17105 PF00909 Ammonium Transporter Family OIO43_17110 PF00543 Nitrogen regulatory protein P-II OIO43_17130 PF00665 Integrase core domain OIO43_17160 PF00582 Universal stress protein family OIO43_17165 PF01740 STAS domain OIO43_17165 PF00916 Sulfate permease family OIO43_17190 PF00905 Penicillin binding protein transpeptidase domain OIO43_17215 PF00596 Class II Aldolase and Adducin N-terminal domain OIO43_17220 PF00701 Dihydrodipicolinate synthetase family OIO43_17240 PF03573 outer membrane porin, OprD family OIO43_17245 PF00719 Inorganic pyrophosphatase OIO43_17260 PF00501 AMP-binding enzyme OIO43_17260 PF13193 AMP-binding enzyme C-terminal domain OIO43_17265 PF03989 DNA gyrase C-terminal domain, beta-propeller OIO43_17265 PF00521 DNA gyrase/topoisomerase IV, subunit A OIO43_17270 PF07690 Major Facilitator Superfamily OIO43_17275 PF03458 UPF0126 domain OIO43_17280 PF02810 SEC-C motif OIO43_17285 PF03471 Transporter associated domain OIO43_17285 PF03741 Integral membrane protein TerC family OIO43_17290 PF03641 Possible lysine decarboxylase OIO43_17295 PF07690 Major Facilitator Superfamily OIO43_17305 PF11798 IMS family HHH motif OIO43_17305 PF11799 impB/mucB/samB family C-terminal domain OIO43_17305 PF00817 impB/mucB/samB family OIO43_17325 PF08497 Radical SAM N-terminal OIO43_17325 PF04055 Radical SAM superfamily OIO43_17325 PF11842 Domain of unknown function (DUF3362) OIO43_17345 PF03358 NADPH-dependent FMN reductase OIO43_17360 PF00291 Pyridoxal-phosphate dependent enzyme OIO43_17420 PF01327 Polypeptide deformylase OIO43_17430 PF02481 DNA recombination-mediator protein A OIO43_17430 PF17782 DprA winged helix domain OIO43_17435 PF01300 Telomere recombination OIO43_17440 PF00892 EamA-like transporter family OIO43_17445 PF00440 Bacterial regulatory proteins, tetR family OIO43_17450 PF07690 Major Facilitator Superfamily OIO43_17460 PF00255 Glutathione peroxidase OIO43_17470 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain OIO43_17475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OIO43_17475 PF02874 ATP synthase alpha/beta family, beta-barrel domain OIO43_17480 PF00231 ATP synthase OIO43_17485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OIO43_17485 PF00306 ATP synthase alpha/beta chain, C terminal domain OIO43_17485 PF02874 ATP synthase alpha/beta family, beta-barrel domain OIO43_17490 PF00213 ATP synthase delta (OSCP) subunit OIO43_17495 PF00430 ATP synthase B/B' CF(0) OIO43_17500 PF00137 ATP synthase subunit C OIO43_17505 PF00119 ATP synthase A chain OIO43_17525 PF00005 ABC transporter OIO43_17530 PF00950 ABC 3 transport family OIO43_17535 PF01810 LysE type translocator OIO43_17540 PF04261 Dyp-type peroxidase family OIO43_17550 PF00390 Malic enzyme, N-terminal domain OIO43_17550 PF03949 Malic enzyme, NAD binding domain OIO43_17555 PF03485 Arginyl tRNA synthetase N terminal domain OIO43_17555 PF05746 DALR anticodon binding domain OIO43_17555 PF00750 tRNA synthetases class I (R) OIO43_17575 PF02678 Pirin OIO43_17575 PF05726 Pirin C-terminal cupin domain OIO43_17585 PF03551 Transcriptional regulator PadR-like family OIO43_17590 PF13427 Domain of unknown function (DUF4111) OIO43_17590 PF01909 Nucleotidyltransferase domain OIO43_17595 PF00117 Glutamine amidotransferase class-I OIO43_17595 PF00958 GMP synthase C terminal domain OIO43_17595 PF02540 NAD synthase OIO43_17600 PF04286 Protein of unknown function (DUF445) OIO43_17605 PF07681 DoxX OIO43_17610 PF09335 SNARE associated Golgi protein OIO43_17625 PF13614 AAA domain OIO43_17635 PF01722 BolA-like protein OIO43_17650 PF01648 4'-phosphopantetheinyl transferase superfamily OIO43_17655 PF12697 Alpha/beta hydrolase family OIO43_17670 PF00501 AMP-binding enzyme OIO43_17670 PF13193 AMP-binding enzyme C-terminal domain OIO43_17670 PF00550 Phosphopantetheine attachment site OIO43_17670 PF00975 Thioesterase domain OIO43_17670 PF00668 Condensation domain OIO43_17675 PF16197 Ketoacyl-synthetase C-terminal extension OIO43_17675 PF00109 Beta-ketoacyl synthase, N-terminal domain OIO43_17675 PF02801 Beta-ketoacyl synthase, C-terminal domain OIO43_17675 PF08242 Methyltransferase domain OIO43_17675 PF00550 Phosphopantetheine attachment site OIO43_17675 PF14765 Polyketide synthase dehydratase OIO43_17675 PF00975 Thioesterase domain OIO43_17680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_17680 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_17680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_17685 PF00501 AMP-binding enzyme OIO43_17690 PF00196 Bacterial regulatory proteins, luxR family OIO43_17690 PF03472 Autoinducer binding domain OIO43_17700 PF00765 Autoinducer synthase OIO43_17705 PF00083 Sugar (and other) transporter OIO43_17705 PF07690 Major Facilitator Superfamily OIO43_17710 PF00378 Enoyl-CoA hydratase/isomerase OIO43_17715 PF00378 Enoyl-CoA hydratase/isomerase OIO43_17720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO43_17720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO43_17720 PF02770 Acyl-CoA dehydrogenase, middle domain OIO43_17725 PF13193 AMP-binding enzyme C-terminal domain OIO43_17725 PF00501 AMP-binding enzyme OIO43_17730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OIO43_17730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OIO43_17735 PF00171 Aldehyde dehydrogenase family OIO43_17745 PF00324 Amino acid permease OIO43_17750 PF00324 Amino acid permease OIO43_17755 PF01042 Endoribonuclease L-PSP OIO43_17760 PF00842 Alanine racemase, C-terminal domain OIO43_17760 PF01168 Alanine racemase, N-terminal domain OIO43_17765 PF01266 FAD dependent oxidoreductase OIO43_17770 PF01037 Lrp/AsnC ligand binding domain OIO43_17780 PF00593 TonB dependent receptor OIO43_17780 PF07715 TonB-dependent Receptor Plug Domain OIO43_17795 PF00849 RNA pseudouridylate synthase OIO43_17840 PF00330 Aconitase family (aconitate hydratase) OIO43_17840 PF00694 Aconitase C-terminal domain OIO43_17845 PF00285 Citrate synthase, C-terminal domain OIO43_17855 PF07729 FCD domain OIO43_17855 PF00392 Bacterial regulatory proteins, gntR family OIO43_17865 PF00155 Aminotransferase class I and II OIO43_17870 PF09330 D-lactate dehydrogenase, membrane binding OIO43_17870 PF01565 FAD binding domain OIO43_17875 PF01070 FMN-dependent dehydrogenase OIO43_17880 PF07729 FCD domain OIO43_17880 PF00392 Bacterial regulatory proteins, gntR family OIO43_17885 PF02652 L-lactate permease OIO43_17890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OIO43_17890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OIO43_17890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OIO43_17890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OIO43_17900 PF16363 GDP-mannose 4,6 dehydratase OIO43_17905 PF00342 Phosphoglucose isomerase OIO43_17910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OIO43_17910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OIO43_17910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OIO43_17915 PF00483 Nucleotidyl transferase OIO43_17920 PF02397 Bacterial sugar transferase OIO43_17925 PF13477 Glycosyl transferase 4-like OIO43_17925 PF00534 Glycosyl transferases group 1 OIO43_17930 PF00534 Glycosyl transferases group 1 OIO43_17930 PF13439 Glycosyltransferase Family 4 OIO43_17935 PF13439 Glycosyltransferase Family 4 OIO43_17935 PF00534 Glycosyl transferases group 1 OIO43_17940 PF00535 Glycosyl transferase family 2 OIO43_17950 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family OIO43_17955 PF05523 WxcM-like, C-terminal OIO43_17960 PF00483 Nucleotidyl transferase OIO43_17965 PF16363 GDP-mannose 4,6 dehydratase OIO43_17970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OIO43_17970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OIO43_17970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OIO43_17975 PF10531 SLBB domain OIO43_17975 PF18412 Outer-membrane lipoprotein Wza C-terminal domain OIO43_17975 PF02563 Polysaccharide biosynthesis/export protein OIO43_17980 PF01451 Low molecular weight phosphotyrosine protein phosphatase OIO43_17985 PF02706 Chain length determinant protein OIO43_17985 PF13614 AAA domain OIO43_17985 PF13807 G-rich domain on putative tyrosine kinase OIO43_17990 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OIO43_17990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO43_17995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OIO43_17995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO43_18000 PF03023 Lipid II flippase MurJ OIO43_18005 PF01510 N-acetylmuramoyl-L-alanine amidase OIO43_18010 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain OIO43_18010 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain OIO43_18020 PF05506 Domain of unknown function (DUF756) OIO43_18020 PF04185 Phosphoesterase family OIO43_18030 PF03725 3' exoribonuclease family, domain 2 OIO43_18030 PF01138 3' exoribonuclease family, domain 1 OIO43_18035 PF00487 Fatty acid desaturase OIO43_18040 PF00175 Oxidoreductase NAD-binding domain OIO43_18045 PF00440 Bacterial regulatory proteins, tetR family OIO43_18050 PF00440 Bacterial regulatory proteins, tetR family OIO43_18050 PF08360 QacR-like protein, C-terminal region OIO43_18055 PF01323 DSBA-like thioredoxin domain OIO43_18065 PF13419 Haloacid dehalogenase-like hydrolase OIO43_18070 PF00106 short chain dehydrogenase OIO43_18085 PF00696 Amino acid kinase family OIO43_18085 PF00583 Acetyltransferase (GNAT) family OIO43_18090 PF09084 NMT1/THI5 like OIO43_18095 PF09084 NMT1/THI5 like OIO43_18100 PF00296 Luciferase-like monooxygenase OIO43_18105 PF00528 Binding-protein-dependent transport system inner membrane component OIO43_18110 PF00005 ABC transporter OIO43_18115 PF08362 YcdC-like protein, C-terminal region OIO43_18115 PF00440 Bacterial regulatory proteins, tetR family OIO43_18120 PF01048 Phosphorylase superfamily OIO43_18130 PF01687 Riboflavin kinase OIO43_18130 PF06574 FAD synthetase OIO43_18135 PF08264 Anticodon-binding domain of tRNA OIO43_18135 PF00133 tRNA synthetases class I (I, L, M and V) OIO43_18135 PF06827 Zinc finger found in FPG and IleRS OIO43_18140 PF01252 Signal peptidase (SPase) II OIO43_18145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO43_18185 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OIO43_18190 PF07859 alpha/beta hydrolase fold OIO43_18210 PF03466 LysR substrate binding domain OIO43_18210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO43_18215 PF01025 GrpE OIO43_18220 PF00012 Hsp70 protein OIO43_18240 PF13406 Transglycosylase SLT domain OIO43_18245 PF02222 ATP-grasp domain OIO43_18245 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain OIO43_18250 PF00731 AIR carboxylase OIO43_18260 PF01225 Mur ligase family, catalytic domain OIO43_18260 PF02875 Mur ligase family, glutamate ligase domain OIO43_18260 PF08245 Mur ligase middle domain OIO43_18270 PF01569 PAP2 superfamily OIO43_18275 PF03741 Integral membrane protein TerC family OIO43_18285 PF03738 Glutathionylspermidine synthase preATP-grasp OIO43_18290 PF00355 Rieske [2Fe-2S] domain OIO43_18295 PF01979 Amidohydrolase family OIO43_18300 PF00156 Phosphoribosyl transferase domain OIO43_18310 PF10411 Disulfide bond isomerase protein N-terminus OIO43_18310 PF13098 Thioredoxin-like domain OIO43_18315 PF01545 Cation efflux family OIO43_18315 PF16916 Dimerisation domain of Zinc Transporter OIO43_18320 PF02583 Metal-sensitive transcriptional repressor OIO43_18325 PF10396 GTP-binding protein TrmE N-terminus OIO43_18325 PF01926 50S ribosome-binding GTPase OIO43_18325 PF12631 MnmE helical domain OIO43_18330 PF14849 YidC periplasmic domain OIO43_18330 PF02096 60Kd inner membrane protein OIO43_18335 PF01809 Putative membrane protein insertion efficiency factor OIO43_18340 PF00825 Ribonuclease P OIO43_18345 PF00468 Ribosomal protein L34 OIO43_18360 PF00929 Exonuclease OIO43_18400 PF12161 HsdM N-terminal domain OIO43_18400 PF02384 N-6 DNA Methylase OIO43_18415 PF12008 Type I restriction and modification enzyme - subunit R C terminal OIO43_18415 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) OIO43_18415 PF18766 SWI2/SNF2 ATPase OIO43_18480 PF03373 Octapeptide repeat OIO43_18480 PF01476 LysM domain OIO43_18480 PF04650 YSIRK type signal peptide OIO43_18480 PF02216 B domain OIO43_18480 PF00746 LPXTG cell wall anchor motif OIO43_18495 PF02559 CarD-like/TRCF domain OIO43_18495 PF00270 DEAD/DEAH box helicase OIO43_18495 PF00271 Helicase conserved C-terminal domain OIO43_18495 PF03461 TRCF domain OIO43_18495 PF17757 UvrB interaction domain OIO43_18515 PF00005 ABC transporter OIO43_18515 PF09383 NIL domain OIO43_18695 PF10410 DnaB-helicase binding domain of primase OIO43_18695 PF08275 DNA primase catalytic core, N-terminal domain OIO43_18695 PF01807 CHC2 zinc finger OIO43_18730 PF00625 Guanylate kinase OIO43_18745 PF07015 VirC1 protein OIO43_18755 PF00589 Phage integrase family OIO43_18755 PF02899 Phage integrase, N-terminal SAM-like domain OIO43_18795 PF07733 Bacterial DNA polymerase III alpha NTPase domain OIO43_18795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OIO43_18795 PF14579 Helix-hairpin-helix motif OIO43_18795 PF02811 PHP domain OIO43_18805 PF07733 Bacterial DNA polymerase III alpha NTPase domain OIO43_18805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OIO43_18805 PF14579 Helix-hairpin-helix motif OIO43_18805 PF02811 PHP domain OIO43_18815 PF07733 Bacterial DNA polymerase III alpha NTPase domain OIO43_18815 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OIO43_18815 PF14579 Helix-hairpin-helix motif OIO43_18815 PF02811 PHP domain OIO43_18830 PF01612 3'-5' exonuclease OIO43_18830 PF00476 DNA polymerase family A OIO43_18830 PF01367 5'-3' exonuclease, C-terminal SAM fold OIO43_18830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OIO43_18835 PF03161 LAGLIDADG DNA endonuclease family OIO43_18835 PF00154 recA bacterial DNA recombination protein OIO43_18860 PF06470 SMC proteins Flexible Hinge Domain OIO43_18860 PF02463 RecF/RecN/SMC N terminal domain OIO43_18880 PF03477 ATP cone domain OIO43_18880 PF02867 Ribonucleotide reductase, barrel domain OIO43_18880 PF00317 Ribonucleotide reductase, all-alpha domain OIO43_18885 PF00268 Ribonucleotide reductase, small chain OIO43_18920 PF13610 DDE domain OIO43_18935 PF00809 Pterin binding enzyme