locus-tag class description OIO60_00005 PF00308 Bacterial dnaA protein OIO60_00005 PF08299 Bacterial dnaA protein helix-turn-helix OIO60_00005 PF11638 DnaA N-terminal domain OIO60_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain OIO60_00010 PF02767 DNA polymerase III beta subunit, central domain OIO60_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain OIO60_00015 PF02463 RecF/RecN/SMC N terminal domain OIO60_00020 PF00204 DNA gyrase B OIO60_00020 PF00986 DNA gyrase B subunit, carboxyl terminus OIO60_00020 PF18053 DNA gyrase B subunit insert domain OIO60_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_00020 PF01751 Toprim domain OIO60_00030 PF09335 SNARE associated Golgi protein OIO60_00035 PF00005 ABC transporter OIO60_00035 PF12848 ABC transporter OIO60_00055 PF01521 Iron-sulphur cluster biosynthesis OIO60_00060 PF00561 alpha/beta hydrolase fold OIO60_00065 PF03702 Anhydro-N-acetylmuramic acid kinase OIO60_00070 PF00579 tRNA synthetases class I (W and Y) OIO60_00110 PF00209 Sodium:neurotransmitter symporter family OIO60_00120 PF01189 16S rRNA methyltransferase RsmB/F OIO60_00120 PF01029 NusB family OIO60_00125 PF02911 Formyl transferase, C-terminal domain OIO60_00125 PF00551 Formyl transferase OIO60_00130 PF00920 Dehydratase family OIO60_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_00145 PF03466 LysR substrate binding domain OIO60_00150 PF00860 Permease family OIO60_00155 PF00311 Phosphoenolpyruvate carboxylase OIO60_00160 PF00440 Bacterial regulatory proteins, tetR family OIO60_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region OIO60_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO60_00170 PF00873 AcrB/AcrD/AcrF family OIO60_00180 PF01556 DnaJ C terminal domain OIO60_00180 PF00684 DnaJ central domain OIO60_00180 PF00226 DnaJ domain OIO60_00190 PF05173 Dihydrodipicolinate reductase, C-terminus OIO60_00190 PF01113 Dihydrodipicolinate reductase, N-terminus OIO60_00200 PF07690 Major Facilitator Superfamily OIO60_00205 PF00248 Aldo/keto reductase family OIO60_00210 PF03466 LysR substrate binding domain OIO60_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_00225 PF00155 Aminotransferase class I and II OIO60_00225 PF00392 Bacterial regulatory proteins, gntR family OIO60_00230 PF00107 Zinc-binding dehydrogenase OIO60_00230 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_00235 PF03352 Methyladenine glycosylase OIO60_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein OIO60_00250 PF14815 NUDIX domain OIO60_00250 PF10576 Iron-sulfur binding domain of endonuclease III OIO60_00250 PF00633 Helix-hairpin-helix motif OIO60_00265 PF07043 Protein of unknown function (DUF1328) OIO60_00270 PF03692 Putative zinc- or iron-chelating domain OIO60_00275 PF07995 Glucose / Sorbosone dehydrogenase OIO60_00280 PF16193 AAA C-terminal domain OIO60_00280 PF00004 ATPase family associated with various cellular activities (AAA) OIO60_00280 PF12002 MgsA AAA+ ATPase C terminal OIO60_00285 PF01226 Formate/nitrite transporter OIO60_00295 PF01259 SAICAR synthetase OIO60_00305 PF00701 Dihydrodipicolinate synthetase family OIO60_00310 PF00857 Isochorismatase family OIO60_00320 PF01554 MatE OIO60_00325 PF04463 Protein of unknown function (DUF523) OIO60_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OIO60_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OIO60_00345 PF02798 Glutathione S-transferase, N-terminal domain OIO60_00345 PF14497 Glutathione S-transferase, C-terminal domain OIO60_00355 PF00324 Amino acid permease OIO60_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain OIO60_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain OIO60_00375 PF00392 Bacterial regulatory proteins, gntR family OIO60_00375 PF07702 UTRA domain OIO60_00380 PF05962 HutD OIO60_00385 PF17391 Urocanase N-terminal domain OIO60_00385 PF17392 Urocanase C-terminal domain OIO60_00385 PF01175 Urocanase Rossmann-like domain OIO60_00390 PF00221 Aromatic amino acid lyase OIO60_00395 PF00324 Amino acid permease OIO60_00400 PF01979 Amidohydrolase family OIO60_00405 PF00491 Arginase family OIO60_00425 PF01177 Asp/Glu/Hydantoin racemase OIO60_00430 PF01380 SIS domain OIO60_00435 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_00435 PF14602 Hexapeptide repeat of succinyl-transferase OIO60_00435 PF12804 MobA-like NTP transferase domain OIO60_00440 PF04608 Phosphatidylglycerophosphatase A OIO60_00445 PF00586 AIR synthase related protein, N-terminal domain OIO60_00445 PF02769 AIR synthase related protein, C-terminal domain OIO60_00450 PF01029 NusB family OIO60_00455 PF00885 6,7-dimethyl-8-ribityllumazine synthase OIO60_00460 PF00925 GTP cyclohydrolase II OIO60_00460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase OIO60_00485 PF02580 D-Tyr-tRNA(Tyr) deacylase OIO60_00490 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family OIO60_00490 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain OIO60_00495 PF00581 Rhodanese-like domain OIO60_00500 PF02666 Phosphatidylserine decarboxylase OIO60_00505 PF03069 Acetamidase/Formamidase family OIO60_00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_00525 PF00512 His Kinase A (phospho-acceptor) domain OIO60_00525 PF00989 PAS fold OIO60_00525 PF11808 Phosphate regulon sensor protein PhoR OIO60_00530 PF00072 Response regulator receiver domain OIO60_00530 PF00486 Transcriptional regulatory protein, C terminal OIO60_00540 PF00106 short chain dehydrogenase OIO60_00545 PF01554 MatE OIO60_00550 PF00155 Aminotransferase class I and II OIO60_00555 PF04286 Protein of unknown function (DUF445) OIO60_00570 PF04262 Glutamate-cysteine ligase OIO60_00575 PF02600 Disulfide bond formation protein DsbB OIO60_00580 PF04717 Type VI secretion system, phage-baseplate injector OIO60_00580 PF13296 Putative type VI secretion system Rhs element Vgr OIO60_00580 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) OIO60_00600 PF05728 Uncharacterised protein family (UPF0227) OIO60_00605 PF00204 DNA gyrase B OIO60_00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_00605 PF01751 Toprim domain OIO60_00605 PF00986 DNA gyrase B subunit, carboxyl terminus OIO60_00610 PF00106 short chain dehydrogenase OIO60_00615 PF04115 Ureidoglycolate lyase OIO60_00620 PF03561 Allantoicase repeat OIO60_00625 PF01494 FAD binding domain OIO60_00635 PF00860 Permease family OIO60_00640 PF00576 HIUase/Transthyretin family OIO60_00670 PF11412 Disulphide bond corrector protein DsbC OIO60_00670 PF02683 Cytochrome C biogenesis protein transmembrane region OIO60_00675 PF00990 Diguanylate cyclase, GGDEF domain OIO60_00675 PF07694 5TMR of 5TMR-LYT OIO60_00680 PF07859 alpha/beta hydrolase fold OIO60_00690 PF03960 ArsC family OIO60_00695 PF03372 Endonuclease/Exonuclease/phosphatase family OIO60_00700 PF00156 Phosphoribosyl transferase domain OIO60_00730 PF00582 Universal stress protein family OIO60_00735 PF01740 STAS domain OIO60_00735 PF00916 Sulfate permease family OIO60_00765 PF02899 Phage integrase, N-terminal SAM-like domain OIO60_00765 PF00589 Phage integrase family OIO60_00790 PF00665 Integrase core domain OIO60_00805 PF00809 Pterin binding enzyme OIO60_00810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OIO60_00810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OIO60_00810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OIO60_00810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OIO60_00820 PF00665 Integrase core domain OIO60_00855 PF02951 Prokaryotic glutathione synthetase, N-terminal domain OIO60_00855 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain OIO60_00860 PF03033 Glycosyltransferase family 28 N-terminal domain OIO60_00860 PF04101 Glycosyltransferase family 28 C-terminal domain OIO60_00865 PF08245 Mur ligase middle domain OIO60_00865 PF02875 Mur ligase family, glutamate ligase domain OIO60_00865 PF01225 Mur ligase family, catalytic domain OIO60_00870 PF07478 D-ala D-ala ligase C-terminus OIO60_00870 PF01820 D-ala D-ala ligase N-terminus OIO60_00875 PF08478 POTRA domain, FtsQ-type OIO60_00875 PF03799 Cell division protein FtsQ OIO60_00880 PF02491 SHS2 domain inserted in FTSA OIO60_00885 PF00091 Tubulin/FtsZ family, GTPase domain OIO60_00885 PF12327 FtsZ family, C-terminal domain OIO60_00890 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase OIO60_00900 PF01551 Peptidase family M23 OIO60_00905 PF00456 Transketolase, thiamine diphosphate binding domain OIO60_00905 PF17831 Pyruvate dehydrogenase E1 component middle domain OIO60_00910 PF02817 e3 binding domain OIO60_00910 PF00364 Biotin-requiring enzyme OIO60_00910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OIO60_00920 PF01169 Uncharacterized protein family UPF0016 OIO60_00925 PF07715 TonB-dependent Receptor Plug Domain OIO60_00925 PF00593 TonB dependent receptor OIO60_00930 PF00258 Flavodoxin OIO60_00930 PF01613 Flavin reductase like domain OIO60_00935 PF03692 Putative zinc- or iron-chelating domain OIO60_00940 PF00571 CBS domain OIO60_00940 PF00478 IMP dehydrogenase / GMP reductase domain OIO60_00945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OIO60_00945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OIO60_00945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OIO60_00945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OIO60_00950 PF01243 Pyridoxamine 5'-phosphate oxidase OIO60_00950 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region OIO60_00955 PF02272 DHHA1 domain OIO60_00955 PF01368 DHH family OIO60_00955 PF17768 RecJ OB domain OIO60_00975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO60_00980 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) OIO60_00985 PF04452 RNA methyltransferase OIO60_00990 PF00924 Mechanosensitive ion channel OIO60_01000 PF16177 Acetyl-coenzyme A synthetase N-terminus OIO60_01000 PF00501 AMP-binding enzyme OIO60_01000 PF13193 AMP-binding enzyme C-terminal domain OIO60_01005 PF00857 Isochorismatase family OIO60_01010 PF01037 Lrp/AsnC ligand binding domain OIO60_01015 PF00872 Transposase, Mutator family OIO60_01020 PF00296 Luciferase-like monooxygenase OIO60_01025 PF03358 NADPH-dependent FMN reductase OIO60_01030 PF00196 Bacterial regulatory proteins, luxR family OIO60_01030 PF00072 Response regulator receiver domain OIO60_01040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_01040 PF01627 Hpt domain OIO60_01040 PF00072 Response regulator receiver domain OIO60_01040 PF00672 HAMP domain OIO60_01040 PF00512 His Kinase A (phospho-acceptor) domain OIO60_01045 PF04341 Protein of unknown function, DUF485 OIO60_01050 PF00474 Sodium:solute symporter family OIO60_01060 PF02028 BCCT, betaine/carnitine/choline family transporter OIO60_01070 PF00990 Diguanylate cyclase, GGDEF domain OIO60_01080 PF17760 UvrA interaction domain OIO60_01080 PF17755 UvrA DNA-binding domain OIO60_01080 PF00005 ABC transporter OIO60_01085 PF16925 Tetracyclin repressor-like, C-terminal domain OIO60_01085 PF00440 Bacterial regulatory proteins, tetR family OIO60_01090 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_01090 PF00107 Zinc-binding dehydrogenase OIO60_01100 PF06942 GlpM protein OIO60_01105 PF08543 Phosphomethylpyrimidine kinase OIO60_01105 PF03070 TENA/THI-4/PQQC family OIO60_01105 PF02581 Thiamine monophosphate synthase OIO60_01115 PF07690 Major Facilitator Superfamily OIO60_01120 PF00436 Single-strand binding protein family OIO60_01130 PF03591 AzlC protein OIO60_01140 PF00324 Amino acid permease OIO60_01145 PF00155 Aminotransferase class I and II OIO60_01145 PF00392 Bacterial regulatory proteins, gntR family OIO60_01150 PF00202 Aminotransferase class-III OIO60_01155 PF00171 Aldehyde dehydrogenase family OIO60_01160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_01165 PF00857 Isochorismatase family OIO60_01170 PF05726 Pirin C-terminal cupin domain OIO60_01170 PF02678 Pirin OIO60_01175 PF01593 Flavin containing amine oxidoreductase OIO60_01195 PF07690 Major Facilitator Superfamily OIO60_01200 PF03466 LysR substrate binding domain OIO60_01200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_01220 PF00248 Aldo/keto reductase family OIO60_01225 PF12833 Helix-turn-helix domain OIO60_01225 PF02311 AraC-like ligand binding domain OIO60_01255 PF01638 HxlR-like helix-turn-helix OIO60_01260 PF02525 Flavodoxin-like fold OIO60_01280 PF02705 K+ potassium transporter OIO60_01305 PF00230 Major intrinsic protein OIO60_01320 PF00977 Histidine biosynthesis protein OIO60_01325 PF01636 Phosphotransferase enzyme family OIO60_01340 PF03992 Antibiotic biosynthesis monooxygenase OIO60_01355 PF00977 Histidine biosynthesis protein OIO60_01380 PF00117 Glutamine amidotransferase class-I OIO60_01385 PF00475 Imidazoleglycerol-phosphate dehydratase OIO60_01405 PF00583 Acetyltransferase (GNAT) family OIO60_01410 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain OIO60_01410 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain OIO60_01420 PF00672 HAMP domain OIO60_01420 PF00512 His Kinase A (phospho-acceptor) domain OIO60_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_01425 PF00072 Response regulator receiver domain OIO60_01425 PF00486 Transcriptional regulatory protein, C terminal OIO60_01430 PF17674 HHH domain OIO60_01430 PF16921 Tex protein YqgF-like domain OIO60_01430 PF09371 Tex-like protein N-terminal domain OIO60_01430 PF00575 S1 RNA binding domain OIO60_01435 PF00916 Sulfate permease family OIO60_01435 PF01740 STAS domain OIO60_01440 PF00106 short chain dehydrogenase OIO60_01445 PF01053 Cys/Met metabolism PLP-dependent enzyme OIO60_01450 PF12848 ABC transporter OIO60_01450 PF00005 ABC transporter OIO60_01475 PF04191 Phospholipid methyltransferase OIO60_01495 PF00529 HlyD membrane-fusion protein of T1SS OIO60_01495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO60_01500 PF00873 AcrB/AcrD/AcrF family OIO60_01505 PF01545 Cation efflux family OIO60_01535 PF00324 Amino acid permease OIO60_01550 PF00749 tRNA synthetases class I (E and Q), catalytic domain OIO60_01565 PF01795 MraW methylase family OIO60_01575 PF03717 Penicillin-binding Protein dimerisation domain OIO60_01575 PF00905 Penicillin binding protein transpeptidase domain OIO60_01580 PF01225 Mur ligase family, catalytic domain OIO60_01580 PF02875 Mur ligase family, glutamate ligase domain OIO60_01580 PF08245 Mur ligase middle domain OIO60_01585 PF01225 Mur ligase family, catalytic domain OIO60_01585 PF02875 Mur ligase family, glutamate ligase domain OIO60_01585 PF08245 Mur ligase middle domain OIO60_01590 PF00953 Glycosyl transferase family 4 OIO60_01600 PF13847 Methyltransferase domain OIO60_01605 PF17092 Penicillin-binding protein OB-like domain OIO60_01605 PF00912 Transglycosylase OIO60_01605 PF00905 Penicillin binding protein transpeptidase domain OIO60_01610 PF11104 Type IV pilus assembly protein PilM; OIO60_01615 PF05137 Fimbrial assembly protein (PilN) OIO60_01620 PF04350 Pilus assembly protein, PilO OIO60_01630 PF00263 Bacterial type II and III secretion system protein OIO60_01630 PF03958 Bacterial type II/III secretion system short domain OIO60_01630 PF11741 AMIN domain OIO60_01630 PF07660 Secretin and TonB N terminus short domain OIO60_01635 PF01202 Shikimate kinase OIO60_01640 PF01761 3-dehydroquinate synthase OIO60_01650 PF01645 Conserved region in glutamate synthase OIO60_01650 PF01493 GXGXG motif OIO60_01650 PF00310 Glutamine amidotransferases class-II OIO60_01650 PF04898 Glutamate synthase central domain OIO60_01655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster OIO60_01655 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_01665 PF04011 LemA family OIO60_01670 PF04536 TPM domain OIO60_01680 PF07963 Prokaryotic N-terminal methylation motif OIO60_01680 PF00114 Pilin (bacterial filament) OIO60_01685 PF15864 Protein glycosylation ligase OIO60_01685 PF04932 O-Antigen ligase OIO60_01685 PF11846 Virulence factor membrane-bound polymerase, C-terminal OIO60_01690 PF00210 Ferritin-like domain OIO60_01695 PF04324 BFD-like [2Fe-2S] binding domain OIO60_01700 PF01042 Endoribonuclease L-PSP OIO60_01705 PF04607 Region found in RelA / SpoT proteins OIO60_01705 PF13291 ACT domain OIO60_01705 PF02824 TGS domain OIO60_01715 PF01192 RNA polymerase Rpb6 OIO60_01720 PF00625 Guanylate kinase OIO60_01725 PF02401 LytB protein OIO60_01765 PF00886 Ribosomal protein S16 OIO60_01770 PF05239 PRC-barrel domain OIO60_01770 PF01782 RimM N-terminal domain OIO60_01775 PF01746 tRNA (Guanine-1)-methyltransferase OIO60_01780 PF01245 Ribosomal protein L19 OIO60_01785 PF00561 alpha/beta hydrolase fold OIO60_01790 PF03280 Proteobacterial lipase chaperone protein OIO60_01795 PF16198 tRNA pseudouridylate synthase B C-terminal domain OIO60_01795 PF01509 TruB family pseudouridylate synthase (N terminal domain) OIO60_01795 PF09157 Pseudouridine synthase II TruB, C-terminal OIO60_01800 PF01925 Sulfite exporter TauE/SafE OIO60_01810 PF00892 EamA-like transporter family OIO60_01815 PF00892 EamA-like transporter family OIO60_01820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OIO60_01820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OIO60_01825 PF02913 FAD linked oxidases, C-terminal domain OIO60_01825 PF01565 FAD binding domain OIO60_01835 PF03992 Antibiotic biosynthesis monooxygenase OIO60_01840 PF02525 Flavodoxin-like fold OIO60_01850 PF07690 Major Facilitator Superfamily OIO60_01855 PF12805 FUSC-like inner membrane protein yccS OIO60_01860 PF00080 Copper/zinc superoxide dismutase (SODC) OIO60_01865 PF01594 AI-2E family transporter OIO60_01870 PF13614 AAA domain OIO60_01900 PF00324 Amino acid permease OIO60_01905 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase OIO60_01905 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain OIO60_01910 PF00202 Aminotransferase class-III OIO60_01915 PF04958 Arginine N-succinyltransferase beta subunit OIO60_01920 PF00171 Aldehyde dehydrogenase family OIO60_01925 PF04996 Succinylarginine dihydrolase OIO60_01930 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family OIO60_01960 PF03466 LysR substrate binding domain OIO60_01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_01965 PF00892 EamA-like transporter family OIO60_01975 PF02092 Glycyl-tRNA synthetase beta subunit OIO60_01975 PF05746 DALR anticodon binding domain OIO60_01980 PF02091 Glycyl-tRNA synthetase alpha subunit OIO60_02005 PF00571 CBS domain OIO60_02010 PF04024 PspC domain OIO60_02020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_02020 PF12806 Acetyl-CoA dehydrogenase C-terminal like OIO60_02020 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_02020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_02030 PF01488 Shikimate / quinate 5-dehydrogenase OIO60_02030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain OIO60_02030 PF08501 Shikimate dehydrogenase substrate binding domain OIO60_02035 PF01218 Coproporphyrinogen III oxidase OIO60_02040 PF00925 GTP cyclohydrolase II OIO60_02045 PF13292 1-deoxy-D-xylulose-5-phosphate synthase OIO60_02045 PF02779 Transketolase, pyrimidine binding domain OIO60_02045 PF02780 Transketolase, C-terminal domain OIO60_02050 PF00459 Inositol monophosphatase family OIO60_02055 PF03880 DbpA RNA binding domain OIO60_02055 PF00270 DEAD/DEAH box helicase OIO60_02055 PF00271 Helicase conserved C-terminal domain OIO60_02055 PF12343 Cold shock protein DEAD box A OIO60_02065 PF00005 ABC transporter OIO60_02070 PF02405 Permease MlaE OIO60_02080 PF05494 MlaC protein OIO60_02090 PF01544 CorA-like Mg2+ transporter protein OIO60_02095 PF03641 Possible lysine decarboxylase OIO60_02100 PF00293 NUDIX domain OIO60_02105 PF00156 Phosphoribosyl transferase domain OIO60_02110 PF17191 RecG wedge domain OIO60_02110 PF00271 Helicase conserved C-terminal domain OIO60_02110 PF00270 DEAD/DEAH box helicase OIO60_02125 PF01553 Acyltransferase OIO60_02135 PF00375 Sodium:dicarboxylate symporter family OIO60_02145 PF01926 50S ribosome-binding GTPase OIO60_02150 PF02082 Transcriptional regulator OIO60_02155 PF00042 Globin OIO60_02155 PF00175 Oxidoreductase NAD-binding domain OIO60_02155 PF00970 Oxidoreductase FAD-binding domain OIO60_02160 PF05872 Bacterial protein of unknown function (DUF853) OIO60_02165 PF01053 Cys/Met metabolism PLP-dependent enzyme OIO60_02170 PF00117 Glutamine amidotransferase class-I OIO60_02175 PF00338 Ribosomal protein S10p/S20e OIO60_02180 PF00297 Ribosomal protein L3 OIO60_02185 PF00573 Ribosomal protein L4/L1 family OIO60_02190 PF00276 Ribosomal protein L23 OIO60_02195 PF00181 Ribosomal Proteins L2, RNA binding domain OIO60_02195 PF03947 Ribosomal Proteins L2, C-terminal domain OIO60_02200 PF00203 Ribosomal protein S19 OIO60_02205 PF00237 Ribosomal protein L22p/L17e OIO60_02215 PF00252 Ribosomal protein L16p/L10e OIO60_02220 PF00831 Ribosomal L29 protein OIO60_02225 PF00366 Ribosomal protein S17 OIO60_02230 PF00238 Ribosomal protein L14p/L23e OIO60_02235 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 OIO60_02235 PF00467 KOW motif OIO60_02240 PF00673 ribosomal L5P family C-terminus OIO60_02240 PF00281 Ribosomal protein L5 OIO60_02245 PF00253 Ribosomal protein S14p/S29e OIO60_02250 PF00410 Ribosomal protein S8 OIO60_02255 PF00347 Ribosomal protein L6 OIO60_02260 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast OIO60_02265 PF00333 Ribosomal protein S5, N-terminal domain OIO60_02265 PF03719 Ribosomal protein S5, C-terminal domain OIO60_02270 PF00327 Ribosomal protein L30p/L7e OIO60_02275 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A OIO60_02280 PF00344 SecY translocase OIO60_02285 PF00444 Ribosomal protein L36 OIO60_02290 PF00416 Ribosomal protein S13/S18 OIO60_02295 PF00411 Ribosomal protein S11 OIO60_02300 PF00163 Ribosomal protein S4/S9 N-terminal domain OIO60_02300 PF01479 S4 domain OIO60_02305 PF01000 RNA polymerase Rpb3/RpoA insert domain OIO60_02305 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain OIO60_02305 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain OIO60_02310 PF01196 Ribosomal protein L17 OIO60_02315 PF00743 Flavin-binding monooxygenase-like OIO60_02320 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_02320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_02320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_02325 PF03937 Flavinator of succinate dehydrogenase OIO60_02355 PF09526 Probable metal-binding protein (DUF2387) OIO60_02360 PF01432 Peptidase family M3 OIO60_02365 PF17876 Cold shock domain OIO60_02365 PF08461 Ribonuclease R winged-helix domain OIO60_02365 PF08206 Ribonuclease B OB domain OIO60_02365 PF00773 RNB domain OIO60_02365 PF00575 S1 RNA binding domain OIO60_02410 PF01557 Fumarylacetoacetate (FAA) hydrolase family OIO60_02415 PF12833 Helix-turn-helix domain OIO60_02420 PF00892 EamA-like transporter family OIO60_02425 PF03631 Virulence factor BrkB OIO60_02430 PF03358 NADPH-dependent FMN reductase OIO60_02455 PF02130 Uncharacterized protein family UPF0054 OIO60_02460 PF02562 PhoH-like protein OIO60_02465 PF00919 Uncharacterized protein family UPF0004 OIO60_02465 PF04055 Radical SAM superfamily OIO60_02465 PF01938 TRAM domain OIO60_02470 PF01464 Transglycosylase SLT domain OIO60_02470 PF01551 Peptidase family M23 OIO60_02470 PF10145 Phage-related minor tail protein OIO60_02480 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain OIO60_02480 PF00056 lactate/malate dehydrogenase, NAD binding domain OIO60_02500 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ OIO60_02505 PF01066 CDP-alcohol phosphatidyltransferase OIO60_02550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_02550 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_02550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_02555 PF00440 Bacterial regulatory proteins, tetR family OIO60_02555 PF17932 Tetracyclin repressor-like, C-terminal domain OIO60_02570 PF01039 Carboxyl transferase domain OIO60_02575 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_02575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_02575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_02585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OIO60_02585 PF00289 Biotin carboxylase, N-terminal domain OIO60_02585 PF02785 Biotin carboxylase C-terminal domain OIO60_02585 PF00364 Biotin-requiring enzyme OIO60_02595 PF04386 Stringent starvation protein B OIO60_02600 PF00043 Glutathione S-transferase, C-terminal domain OIO60_02600 PF13417 Glutathione S-transferase, N-terminal domain OIO60_02605 PF00380 Ribosomal protein S9/S16 OIO60_02610 PF00572 Ribosomal protein L13 OIO60_02615 PF04166 Pyridoxal phosphate biosynthetic protein PdxA OIO60_02620 PF00398 Ribosomal RNA adenine dimethylase OIO60_02625 PF00149 Calcineurin-like phosphoesterase OIO60_02645 PF16360 GTP-binding GTPase Middle Region OIO60_02645 PF01926 50S ribosome-binding GTPase OIO60_02645 PF13167 GTP-binding GTPase N-terminal OIO60_02655 PF13091 PLD-like domain OIO60_02660 PF00149 Calcineurin-like phosphoesterase OIO60_02660 PF10518 TAT (twin-arginine translocation) pathway signal sequence OIO60_02665 PF00691 OmpA family OIO60_02665 PF01389 OmpA-like transmembrane domain OIO60_02670 PF17152 Periplasmic sensor domain OIO60_02670 PF00990 Diguanylate cyclase, GGDEF domain OIO60_02705 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_02705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OIO60_02715 PF04273 Putative phosphatase (DUF442) OIO60_02715 PF00753 Metallo-beta-lactamase superfamily OIO60_02720 PF00561 alpha/beta hydrolase fold OIO60_02725 PF00085 Thioredoxin OIO60_02730 PF03061 Thioesterase superfamily OIO60_02740 PF04461 Protein of unknown function (DUF520) OIO60_02750 PF01266 FAD dependent oxidoreductase OIO60_02750 PF05430 S-adenosyl-L-methionine-dependent methyltransferase OIO60_02760 PF03795 YCII-related domain OIO60_02765 PF04279 Intracellular septation protein A OIO60_02770 PF02811 PHP domain OIO60_02775 PF01062 Bestrophin, RFP-TM, chloride channel OIO60_02780 PF04002 RadC-like JAB domain OIO60_02785 PF02441 Flavoprotein OIO60_02785 PF04127 DNA / pantothenate metabolism flavoprotein OIO60_02790 PF02355 Protein export membrane protein OIO60_02790 PF07549 SecD/SecF GG Motif OIO60_02795 PF07549 SecD/SecF GG Motif OIO60_02795 PF02355 Protein export membrane protein OIO60_02795 PF13721 SecD export protein N-terminal TM region OIO60_02800 PF02699 Preprotein translocase subunit OIO60_02805 PF01702 Queuine tRNA-ribosyltransferase OIO60_02820 PF02547 Queuosine biosynthesis protein OIO60_02850 PF07689 KaiB domain OIO60_02850 PF00512 His Kinase A (phospho-acceptor) domain OIO60_02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_02855 PF03710 Glutamate-ammonia ligase adenylyltransferase OIO60_02855 PF08335 GlnD PII-uridylyltransferase OIO60_02860 PF01063 Amino-transferase class IV OIO60_02875 PF01522 Polysaccharide deacetylase OIO60_02880 PF00535 Glycosyl transferase family 2 OIO60_02885 PF13439 Glycosyltransferase Family 4 OIO60_02885 PF00534 Glycosyl transferases group 1 OIO60_02910 PF17102 Stealth protein CR3, conserved region 3 OIO60_02910 PF17101 Stealth protein CR1, conserved region 1 OIO60_02910 PF11380 Stealth protein CR2, conserved region 2 OIO60_02915 PF00152 tRNA synthetases class II (D, K and N) OIO60_02915 PF01336 OB-fold nucleic acid binding domain OIO60_02915 PF02938 GAD domain OIO60_02925 PF07715 TonB-dependent Receptor Plug Domain OIO60_02925 PF00593 TonB dependent receptor OIO60_02945 PF06146 Phosphate-starvation-inducible E OIO60_02950 PF02798 Glutathione S-transferase, N-terminal domain OIO60_02950 PF00043 Glutathione S-transferase, C-terminal domain OIO60_02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_02955 PF03466 LysR substrate binding domain OIO60_02960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_02960 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_02960 PF12806 Acetyl-CoA dehydrogenase C-terminal like OIO60_02960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_02965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_02965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_02965 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_02965 PF12806 Acetyl-CoA dehydrogenase C-terminal like OIO60_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_02975 PF00672 HAMP domain OIO60_02975 PF00512 His Kinase A (phospho-acceptor) domain OIO60_02980 PF00072 Response regulator receiver domain OIO60_02980 PF00486 Transcriptional regulatory protein, C terminal OIO60_02985 PF02696 Uncharacterized ACR, YdiU/UPF0061 family OIO60_03005 PF01923 Cobalamin adenosyltransferase OIO60_03010 PF07715 TonB-dependent Receptor Plug Domain OIO60_03010 PF00593 TonB dependent receptor OIO60_03015 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase OIO60_03020 PF00291 Pyridoxal-phosphate dependent enzyme OIO60_03045 PF00290 Tryptophan synthase alpha chain OIO60_03050 PF01039 Carboxyl transferase domain OIO60_03055 PF02875 Mur ligase family, glutamate ligase domain OIO60_03055 PF08245 Mur ligase middle domain OIO60_03070 PF00753 Metallo-beta-lactamase superfamily OIO60_03075 PF00578 AhpC/TSA family OIO60_03075 PF10417 C-terminal domain of 1-Cys peroxiredoxin OIO60_03080 PF02810 SEC-C motif OIO60_03080 PF07517 SecA DEAD-like domain OIO60_03080 PF01043 SecA preprotein cross-linking domain OIO60_03080 PF07516 SecA Wing and Scaffold domain OIO60_03090 PF07690 Major Facilitator Superfamily OIO60_03090 PF00083 Sugar (and other) transporter OIO60_03095 PF03006 Haemolysin-III related OIO60_03120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OIO60_03120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OIO60_03120 PF00378 Enoyl-CoA hydratase/isomerase OIO60_03125 PF02803 Thiolase, C-terminal domain OIO60_03125 PF00108 Thiolase, N-terminal domain OIO60_03130 PF12833 Helix-turn-helix domain OIO60_03130 PF02311 AraC-like ligand binding domain OIO60_03135 PF02515 CoA-transferase family III OIO60_03140 PF04966 Carbohydrate-selective porin, OprB family OIO60_03145 PF01011 PQQ enzyme repeat OIO60_03150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OIO60_03150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OIO60_03160 PF00893 Small Multidrug Resistance protein OIO60_03170 PF00108 Thiolase, N-terminal domain OIO60_03170 PF02803 Thiolase, C-terminal domain OIO60_03180 PF00691 OmpA family OIO60_03180 PF13505 Outer membrane protein beta-barrel domain OIO60_03190 PF01139 tRNA-splicing ligase RtcB OIO60_03195 PF00324 Amino acid permease OIO60_03200 PF05175 Methyltransferase small domain OIO60_03200 PF08468 Methyltransferase small domain N-terminal OIO60_03205 PF00860 Permease family OIO60_03210 PF00679 Elongation factor G C-terminus OIO60_03210 PF00009 Elongation factor Tu GTP binding domain OIO60_03210 PF03144 Elongation factor Tu domain 2 OIO60_03215 PF01741 Large-conductance mechanosensitive channel, MscL OIO60_03230 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain OIO60_03230 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain OIO60_03230 PF06827 Zinc finger found in FPG and IleRS OIO60_03235 PF02245 Methylpurine-DNA glycosylase (MPG) OIO60_03240 PF07715 TonB-dependent Receptor Plug Domain OIO60_03240 PF00593 TonB dependent receptor OIO60_03245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO60_03260 PF13098 Thioredoxin-like domain OIO60_03260 PF10411 Disulfide bond isomerase protein N-terminus OIO60_03265 PF01571 Aminomethyltransferase folate-binding domain OIO60_03275 PF04343 Protein of unknown function, DUF488 OIO60_03280 PF08274 PhnA Zinc-Ribbon OIO60_03280 PF03831 PhnA domain OIO60_03285 PF07411 Domain of unknown function (DUF1508) OIO60_03290 PF03129 Anticodon binding domain OIO60_03290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OIO60_03290 PF04073 Aminoacyl-tRNA editing domain OIO60_03295 PF00873 AcrB/AcrD/AcrF family OIO60_03310 PF00072 Response regulator receiver domain OIO60_03315 PF00072 Response regulator receiver domain OIO60_03320 PF01584 CheW-like domain OIO60_03325 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term OIO60_03325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OIO60_03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_03330 PF01584 CheW-like domain OIO60_03330 PF00072 Response regulator receiver domain OIO60_03330 PF01627 Hpt domain OIO60_03340 PF01546 Peptidase family M20/M25/M40 OIO60_03340 PF07687 Peptidase dimerisation domain OIO60_03345 PF08085 Entericidin EcnA/B family OIO60_03355 PF04304 Protein of unknown function (DUF454) OIO60_03360 PF17969 L,D-transpeptidase C-terminal domain OIO60_03360 PF03734 L,D-transpeptidase catalytic domain OIO60_03400 PF00667 FAD binding domain OIO60_03400 PF00175 Oxidoreductase NAD-binding domain OIO60_03400 PF00258 Flavodoxin OIO60_03410 PF12805 FUSC-like inner membrane protein yccS OIO60_03415 PF07690 Major Facilitator Superfamily OIO60_03420 PF00881 Nitroreductase family OIO60_03435 PF01235 Sodium:alanine symporter family OIO60_03440 PF01734 Patatin-like phospholipase OIO60_03445 PF00291 Pyridoxal-phosphate dependent enzyme OIO60_03445 PF13291 ACT domain OIO60_03450 PF05992 SbmA/BacA-like family OIO60_03480 PF02637 GatB domain OIO60_03480 PF02934 GatB/GatE catalytic domain OIO60_03485 PF01425 Amidase OIO60_03490 PF02686 Glu-tRNAGln amidotransferase C subunit OIO60_03500 PF04085 rod shape-determining protein MreC OIO60_03505 PF04093 rod shape-determining protein MreD OIO60_03510 PF02545 Maf-like protein OIO60_03515 PF10150 Ribonuclease E/G family OIO60_03515 PF00575 S1 RNA binding domain OIO60_03525 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain OIO60_03525 PF06974 Protein of unknown function (DUF1298) OIO60_03530 PF01507 Phosphoadenosine phosphosulfate reductase family OIO60_03545 PF02525 Flavodoxin-like fold OIO60_03565 PF02673 Bacitracin resistance protein BacA OIO60_03570 PF06719 AraC-type transcriptional regulator N-terminus OIO60_03570 PF12833 Helix-turn-helix domain OIO60_03575 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_03575 PF08990 Erythronolide synthase docking OIO60_03575 PF09277 Erythronolide synthase, docking OIO60_03575 PF16197 Ketoacyl-synthetase C-terminal extension OIO60_03575 PF00109 Beta-ketoacyl synthase, N-terminal domain OIO60_03575 PF02801 Beta-ketoacyl synthase, C-terminal domain OIO60_03575 PF08659 KR domain OIO60_03575 PF00550 Phosphopantetheine attachment site OIO60_03575 PF14765 Polyketide synthase dehydratase OIO60_03575 PF00698 Acyl transferase domain OIO60_03580 PF01965 DJ-1/PfpI family OIO60_03590 PF00324 Amino acid permease OIO60_03595 PF04303 PrpF protein OIO60_03600 PF00348 Polyprenyl synthetase OIO60_03605 PF04237 YjbR OIO60_03610 PF01145 SPFH domain / Band 7 family OIO60_03620 PF01734 Patatin-like phospholipase OIO60_03645 PF00884 Sulfatase OIO60_03645 PF08019 Phosphoethanolamine transferase EptA/EptB OIO60_03650 PF00486 Transcriptional regulatory protein, C terminal OIO60_03650 PF00072 Response regulator receiver domain OIO60_03655 PF00512 His Kinase A (phospho-acceptor) domain OIO60_03655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_03655 PF08521 Two-component sensor kinase N-terminal OIO60_03665 PF00909 Ammonium Transporter Family OIO60_03670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_03670 PF03466 LysR substrate binding domain OIO60_03690 PF10458 Valyl tRNA synthetase tRNA binding arm OIO60_03690 PF08264 Anticodon-binding domain of tRNA OIO60_03690 PF00133 tRNA synthetases class I (I, L, M and V) OIO60_03710 PF01906 Putative heavy-metal-binding OIO60_03715 PF01906 Putative heavy-metal-binding OIO60_03720 PF02321 Outer membrane efflux protein OIO60_03725 PF00873 AcrB/AcrD/AcrF family OIO60_03730 PF00529 HlyD membrane-fusion protein of T1SS OIO60_03730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO60_03735 PF01569 PAP2 superfamily OIO60_03745 PF00348 Polyprenyl synthetase OIO60_03755 PF00829 Ribosomal prokaryotic L21 protein OIO60_03760 PF01016 Ribosomal L27 protein OIO60_03765 PF03548 Outer membrane lipoprotein carrier protein LolA OIO60_03775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OIO60_03775 PF02403 Seryl-tRNA synthetase N-terminal domain OIO60_03780 PF10414 Sirohaem synthase dimerisation region OIO60_03780 PF14824 Sirohaem biosynthesis protein central OIO60_03780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OIO60_03785 PF00588 SpoU rRNA Methylase family OIO60_03790 PF01638 HxlR-like helix-turn-helix OIO60_03795 PF03358 NADPH-dependent FMN reductase OIO60_03800 PF13520 Amino acid permease OIO60_03805 PF00465 Iron-containing alcohol dehydrogenase OIO60_03815 PF03099 Biotin/lipoate A/B protein ligase family OIO60_03820 PF04359 Protein of unknown function (DUF493) OIO60_03825 PF04545 Sigma-70, region 4 OIO60_03825 PF04542 Sigma-70 region 2 OIO60_03825 PF04539 Sigma-70 region 3 OIO60_03825 PF03979 Sigma-70 factor, region 1.1 OIO60_03825 PF00140 Sigma-70 factor, region 1.2 OIO60_03825 PF04546 Sigma-70, non-essential region OIO60_03845 PF00581 Rhodanese-like domain OIO60_03845 PF17773 UPF0176 acylphosphatase like domain OIO60_03855 PF00285 Citrate synthase, C-terminal domain OIO60_03860 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OIO60_03865 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OIO60_03870 PF00890 FAD binding domain OIO60_03870 PF02910 Fumarate reductase flavoprotein C-term OIO60_03875 PF13085 2Fe-2S iron-sulfur cluster binding domain OIO60_03890 PF16078 2-oxoglutarate dehydrogenase N-terminus OIO60_03890 PF00676 Dehydrogenase E1 component OIO60_03890 PF16870 2-oxoglutarate dehydrogenase C-terminal OIO60_03890 PF02779 Transketolase, pyrimidine binding domain OIO60_03895 PF00364 Biotin-requiring enzyme OIO60_03895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OIO60_03895 PF02817 e3 binding domain OIO60_03900 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_03900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OIO60_03905 PF00549 CoA-ligase OIO60_03905 PF08442 ATP-grasp domain OIO60_03910 PF02629 CoA binding domain OIO60_03910 PF00549 CoA-ligase OIO60_03915 PF00579 tRNA synthetases class I (W and Y) OIO60_03920 PF05661 Protein of unknown function (DUF808) OIO60_03925 PF04228 Putative neutral zinc metallopeptidase OIO60_03930 PF00999 Sodium/hydrogen exchanger family OIO60_03945 PF09587 Bacterial capsule synthesis protein PGA_cap OIO60_03955 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OIO60_03960 PF00582 Universal stress protein family OIO60_03965 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_03970 PF01272 Transcription elongation factor, GreA/GreB, C-term OIO60_03970 PF03449 Transcription elongation factor, N-terminal OIO60_03975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OIO60_03975 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain OIO60_03975 PF02142 MGS-like domain OIO60_03980 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain OIO60_03980 PF00117 Glutamine amidotransferase class-I OIO60_03995 PF01985 CRS1 / YhbY (CRM) domain OIO60_04000 PF01728 FtsJ-like methyltransferase OIO60_04005 PF01434 Peptidase family M41 OIO60_04005 PF17862 AAA+ lid domain OIO60_04005 PF00004 ATPase family associated with various cellular activities (AAA) OIO60_04005 PF06480 FtsH Extracellular OIO60_04010 PF00809 Pterin binding enzyme OIO60_04030 PF09423 PhoD-like phosphatase OIO60_04030 PF16655 PhoD-like phosphatase, N-terminal domain OIO60_04045 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain OIO60_04045 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain OIO60_04060 PF00083 Sugar (and other) transporter OIO60_04065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OIO60_04065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OIO60_04070 PF01266 FAD dependent oxidoreductase OIO60_04070 PF16901 C-terminal domain of alpha-glycerophosphate oxidase OIO60_04075 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain OIO60_04075 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain OIO60_04080 PF00781 Diacylglycerol kinase catalytic domain OIO60_04085 PF00149 Calcineurin-like phosphoesterase OIO60_04095 PF00166 Chaperonin 10 Kd subunit OIO60_04100 PF00118 TCP-1/cpn60 chaperonin family OIO60_04105 PF01219 Prokaryotic diacylglycerol kinase OIO60_04110 PF00753 Metallo-beta-lactamase superfamily OIO60_04115 PF03009 Glycerophosphoryl diester phosphodiesterase family OIO60_04120 PF00873 AcrB/AcrD/AcrF family OIO60_04130 PF01435 Peptidase family M48 OIO60_04135 PF01464 Transglycosylase SLT domain OIO60_04140 PF01171 PP-loop family OIO60_04150 PF00497 Bacterial extracellular solute-binding proteins, family 3 OIO60_04150 PF01464 Transglycosylase SLT domain OIO60_04155 PF01272 Transcription elongation factor, GreA/GreB, C-term OIO60_04155 PF03449 Transcription elongation factor, N-terminal OIO60_04170 PF00501 AMP-binding enzyme OIO60_04170 PF13193 AMP-binding enzyme C-terminal domain OIO60_04170 PF00550 Phosphopantetheine attachment site OIO60_04170 PF00668 Condensation domain OIO60_04170 PF00975 Thioesterase domain OIO60_04200 PF00881 Nitroreductase family OIO60_04215 PF02595 Glycerate kinase family OIO60_04220 PF00384 Molybdopterin oxidoreductase OIO60_04225 PF02634 FdhD/NarQ family OIO60_04230 PF06803 Protein of unknown function (DUF1232) OIO60_04235 PF11890 Domain of unknown function (DUF3410) OIO60_04235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OIO60_04235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OIO60_04240 PF00152 tRNA synthetases class II (D, K and N) OIO60_04250 PF18073 Rubredoxin metal binding domain OIO60_04255 PF00324 Amino acid permease OIO60_04265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OIO60_04265 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain OIO60_04270 PF01678 Diaminopimelate epimerase OIO60_04275 PF01810 LysE type translocator OIO60_04280 PF02899 Phage integrase, N-terminal SAM-like domain OIO60_04280 PF00589 Phage integrase family OIO60_04285 PF01012 Electron transfer flavoprotein domain OIO60_04290 PF00766 Electron transfer flavoprotein FAD-binding domain OIO60_04290 PF01012 Electron transfer flavoprotein domain OIO60_04295 PF03989 DNA gyrase C-terminal domain, beta-propeller OIO60_04295 PF00521 DNA gyrase/topoisomerase IV, subunit A OIO60_04310 PF00535 Glycosyl transferase family 2 OIO60_04330 PF13533 Biotin-lipoyl like OIO60_04340 PF00266 Aminotransferase class-V OIO60_04355 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 OIO60_04365 PF02687 FtsX-like permease family OIO60_04365 PF12704 MacB-like periplasmic core domain OIO60_04370 PF00005 ABC transporter OIO60_04375 PF03772 Competence protein OIO60_04375 PF13567 Domain of unknown function (DUF4131) OIO60_04375 PF00753 Metallo-beta-lactamase superfamily OIO60_04385 PF06965 Na+/H+ antiporter 1 OIO60_04385 PF01343 Peptidase family S49 OIO60_04390 PF12697 Alpha/beta hydrolase family OIO60_04395 PF00551 Formyl transferase OIO60_04400 PF00586 AIR synthase related protein, N-terminal domain OIO60_04400 PF02769 AIR synthase related protein, C-terminal domain OIO60_04405 PF01594 AI-2E family transporter OIO60_04410 PF00308 Bacterial dnaA protein OIO60_04410 PF08299 Bacterial dnaA protein helix-turn-helix OIO60_04410 PF11638 DnaA N-terminal domain OIO60_04440 PF00588 SpoU rRNA Methylase family OIO60_04440 PF08032 RNA 2'-O ribose methyltransferase substrate binding OIO60_04445 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain OIO60_04455 PF00691 OmpA family OIO60_04460 PF07676 WD40-like Beta Propeller Repeat OIO60_04460 PF04052 TolB amino-terminal domain OIO60_04470 PF02472 Biopolymer transport protein ExbD/TolR OIO60_04475 PF01618 MotA/TolQ/ExbB proton channel family OIO60_04480 PF03061 Thioesterase superfamily OIO60_04485 PF01546 Peptidase family M20/M25/M40 OIO60_04485 PF07687 Peptidase dimerisation domain OIO60_04490 PF05496 Holliday junction DNA helicase RuvB P-loop domain OIO60_04490 PF05491 RuvB C-terminal winged helix domain OIO60_04490 PF17864 RuvB AAA lid domain OIO60_04495 PF01330 RuvA N terminal domain OIO60_04495 PF07499 RuvA, C-terminal domain OIO60_04500 PF01966 HD domain OIO60_04505 PF02769 AIR synthase related protein, C-terminal domain OIO60_04505 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain OIO60_04505 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal OIO60_04510 PF07690 Major Facilitator Superfamily OIO60_04520 PF01784 NIF3 (NGG1p interacting factor 3) OIO60_04525 PF00378 Enoyl-CoA hydratase/isomerase OIO60_04530 PF01467 Cytidylyltransferase-like OIO60_04530 PF00293 NUDIX domain OIO60_04540 PF00578 AhpC/TSA family OIO60_04555 PF06508 Queuosine biosynthesis protein QueC OIO60_04565 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal OIO60_04565 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_04565 PF14602 Hexapeptide repeat of succinyl-transferase OIO60_04575 PF03466 LysR substrate binding domain OIO60_04575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_04580 PF12857 TOBE-like domain OIO60_04580 PF00005 ABC transporter OIO60_04585 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_04590 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_04605 PF01063 Amino-transferase class IV OIO60_04610 PF02618 YceG-like family OIO60_04615 PF02223 Thymidylate kinase OIO60_04625 PF00890 FAD binding domain OIO60_04625 PF02910 Fumarate reductase flavoprotein C-term OIO60_04630 PF13180 PDZ domain OIO60_04640 PF00679 Elongation factor G C-terminus OIO60_04640 PF03144 Elongation factor Tu domain 2 OIO60_04640 PF00009 Elongation factor Tu GTP binding domain OIO60_04640 PF06421 GTP-binding protein LepA C-terminus OIO60_04645 PF10502 Signal peptidase, peptidase S26 OIO60_04655 PF00035 Double-stranded RNA binding motif OIO60_04655 PF14622 Ribonuclease-III-like OIO60_04660 PF07650 KH domain OIO60_04660 PF01926 50S ribosome-binding GTPase OIO60_04670 PF02565 Recombination protein O C terminal OIO60_04670 PF11967 Recombination protein O N terminal OIO60_04675 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ OIO60_04680 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) OIO60_04685 PF00106 short chain dehydrogenase OIO60_04715 PF00155 Aminotransferase class I and II OIO60_04725 PF17151 Periplasmic sensor domain OIO60_04725 PF00990 Diguanylate cyclase, GGDEF domain OIO60_04735 PF00271 Helicase conserved C-terminal domain OIO60_04735 PF17757 UvrB interaction domain OIO60_04735 PF04851 Type III restriction enzyme, res subunit OIO60_04735 PF02151 UvrB/uvrC motif OIO60_04735 PF12344 Ultra-violet resistance protein B OIO60_04745 PF00892 EamA-like transporter family OIO60_04750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain OIO60_04750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain OIO60_04765 PF01018 GTP1/OBG OIO60_04765 PF01926 50S ribosome-binding GTPase OIO60_04770 PF00696 Amino acid kinase family OIO60_04770 PF01472 PUA domain OIO60_04780 PF07759 Protein of unknown function (DUF1615) OIO60_05115 PF00589 Phage integrase family OIO60_05120 PF01207 Dihydrouridine synthase (Dus) OIO60_05125 PF03060 Nitronate monooxygenase OIO60_05140 PF02350 UDP-N-acetylglucosamine 2-epimerase OIO60_05170 PF03441 FAD binding domain of DNA photolyase OIO60_05170 PF00875 DNA photolyase OIO60_05175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO60_05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_05195 PF03971 Monomeric isocitrate dehydrogenase OIO60_05200 PF00849 RNA pseudouridylate synthase OIO60_05205 PF00180 Isocitrate/isopropylmalate dehydrogenase OIO60_05225 PF06779 Uncharacterised MFS-type transporter YbfB OIO60_05230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_05230 PF03466 LysR substrate binding domain OIO60_05235 PF00375 Sodium:dicarboxylate symporter family OIO60_05240 PF02567 Phenazine biosynthesis-like protein OIO60_05245 PF05193 Peptidase M16 inactive domain OIO60_05245 PF00675 Insulinase (Peptidase family M16) OIO60_05270 PF02581 Thiamine monophosphate synthase OIO60_05275 PF00202 Aminotransferase class-III OIO60_05285 PF00849 RNA pseudouridylate synthase OIO60_05290 PF18337 RapA N-terminal Tudor like domain OIO60_05290 PF12137 RNA polymerase recycling family C-terminal OIO60_05290 PF00271 Helicase conserved C-terminal domain OIO60_05290 PF18339 RapA N-terminal Tudor like domain 1 OIO60_05290 PF00176 SNF2 family N-terminal domain OIO60_05300 PF00440 Bacterial regulatory proteins, tetR family OIO60_05305 PF00175 Oxidoreductase NAD-binding domain OIO60_05305 PF00970 Oxidoreductase FAD-binding domain OIO60_05305 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO60_05310 PF00487 Fatty acid desaturase OIO60_05320 PF00440 Bacterial regulatory proteins, tetR family OIO60_05320 PF17754 MftR C-terminal domain OIO60_05330 PF00202 Aminotransferase class-III OIO60_05335 PF00282 Pyridoxal-dependent decarboxylase conserved domain OIO60_05340 PF00171 Aldehyde dehydrogenase family OIO60_05345 PF01037 Lrp/AsnC ligand binding domain OIO60_05350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OIO60_05350 PF00205 Thiamine pyrophosphate enzyme, central domain OIO60_05350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OIO60_05355 PF00324 Amino acid permease OIO60_05360 PF12849 PBP superfamily domain OIO60_05365 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_05370 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_05375 PF00005 ABC transporter OIO60_05380 PF08496 Peptidase family S49 N-terminal OIO60_05380 PF01343 Peptidase family S49 OIO60_05395 PF08328 Adenylosuccinate lyase C-terminal OIO60_05395 PF00206 Lyase OIO60_05400 PF04356 Protein of unknown function (DUF489) OIO60_05410 PF13344 Haloacid dehalogenase-like hydrolase OIO60_05410 PF00293 NUDIX domain OIO60_05415 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_05420 PF07943 Penicillin-binding protein 5, C-terminal domain OIO60_05420 PF00768 D-alanyl-D-alanine carboxypeptidase OIO60_05435 PF01975 Survival protein SurE OIO60_05440 PF01476 LysM domain OIO60_05440 PF01551 Peptidase family M23 OIO60_05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_05445 PF03466 LysR substrate binding domain OIO60_05450 PF05362 Lon protease (S16) C-terminal proteolytic domain OIO60_05450 PF13654 AAA domain OIO60_05455 PF07690 Major Facilitator Superfamily OIO60_05460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OIO60_05465 PF13593 SBF-like CPA transporter family (DUF4137) OIO60_05470 PF01197 Ribosomal protein L31 OIO60_05485 PF04055 Radical SAM superfamily OIO60_05490 PF08207 Elongation factor P (EF-P) KOW-like domain OIO60_05490 PF01132 Elongation factor P (EF-P) OB domain OIO60_05490 PF09285 Elongation factor P, C-terminal OIO60_05495 PF02554 Carbon starvation protein CstA OIO60_05495 PF13722 5TM C-terminal transporter carbon starvation CstA OIO60_05500 PF04328 Selenoprotein, putative OIO60_05535 PF13556 PucR C-terminal helix-turn-helix domain OIO60_05535 PF17853 GGDEF-like domain OIO60_05535 PF06018 CodY GAF-like domain OIO60_05550 PF00171 Aldehyde dehydrogenase family OIO60_05555 PF00324 Amino acid permease OIO60_05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_05560 PF03466 LysR substrate binding domain OIO60_05565 PF02028 BCCT, betaine/carnitine/choline family transporter OIO60_05570 PF02028 BCCT, betaine/carnitine/choline family transporter OIO60_05575 PF00355 Rieske [2Fe-2S] domain OIO60_05575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) OIO60_05580 PF00171 Aldehyde dehydrogenase family OIO60_05590 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_05590 PF18113 Rubredoxin binding C-terminal domain OIO60_05595 PF01266 FAD dependent oxidoreductase OIO60_05595 PF05430 S-adenosyl-L-methionine-dependent methyltransferase OIO60_05615 PF00892 EamA-like transporter family OIO60_05625 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system OIO60_05630 PF00083 Sugar (and other) transporter OIO60_05635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OIO60_05635 PF13378 Enolase C-terminal domain-like OIO60_05640 PF00550 Phosphopantetheine attachment site OIO60_05640 PF00698 Acyl transferase domain OIO60_05640 PF14765 Polyketide synthase dehydratase OIO60_05640 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_05640 PF08990 Erythronolide synthase docking OIO60_05640 PF09277 Erythronolide synthase, docking OIO60_05640 PF16197 Ketoacyl-synthetase C-terminal extension OIO60_05640 PF00109 Beta-ketoacyl synthase, N-terminal domain OIO60_05640 PF02801 Beta-ketoacyl synthase, C-terminal domain OIO60_05640 PF08659 KR domain OIO60_05645 PF00440 Bacterial regulatory proteins, tetR family OIO60_05665 PF02678 Pirin OIO60_05665 PF17954 Quercetinase C-terminal cupin domain OIO60_05675 PF13309 HTH domain OIO60_05675 PF08348 YheO-like PAS domain OIO60_05685 PF00501 AMP-binding enzyme OIO60_05685 PF13193 AMP-binding enzyme C-terminal domain OIO60_05685 PF00668 Condensation domain OIO60_05685 PF00550 Phosphopantetheine attachment site OIO60_05690 PF00975 Thioesterase domain OIO60_05690 PF00668 Condensation domain OIO60_05690 PF00501 AMP-binding enzyme OIO60_05690 PF00550 Phosphopantetheine attachment site OIO60_05690 PF13193 AMP-binding enzyme C-terminal domain OIO60_05700 PF01032 FecCD transport family OIO60_05705 PF01032 FecCD transport family OIO60_05710 PF00005 ABC transporter OIO60_05715 PF01497 Periplasmic binding protein OIO60_05720 PF07715 TonB-dependent Receptor Plug Domain OIO60_05720 PF00593 TonB dependent receptor OIO60_05725 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) OIO60_05730 PF00501 AMP-binding enzyme OIO60_05730 PF00668 Condensation domain OIO60_05730 PF00550 Phosphopantetheine attachment site OIO60_05735 PF00501 AMP-binding enzyme OIO60_05735 PF13193 AMP-binding enzyme C-terminal domain OIO60_05740 PF00857 Isochorismatase family OIO60_05740 PF00550 Phosphopantetheine attachment site OIO60_05745 PF00282 Pyridoxal-dependent decarboxylase conserved domain OIO60_05755 PF00005 ABC transporter OIO60_05760 PF00005 ABC transporter OIO60_05765 PF00975 Thioesterase domain OIO60_05775 PF00425 chorismate binding enzyme OIO60_05785 PF01208 Uroporphyrinogen decarboxylase (URO-D) OIO60_05790 PF05675 Protein of unknown function (DUF817) OIO60_05805 PF00144 Beta-lactamase OIO60_05810 PF01227 GTP cyclohydrolase I OIO60_05815 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO60_05815 PF01799 [2Fe-2S] binding domain OIO60_05820 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain OIO60_05820 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase OIO60_05835 PF00218 Indole-3-glycerol phosphate synthase OIO60_05840 PF02885 Glycosyl transferase family, helical bundle domain OIO60_05840 PF00591 Glycosyl transferase family, a/b domain OIO60_05845 PF07715 TonB-dependent Receptor Plug Domain OIO60_05845 PF00593 TonB dependent receptor OIO60_05850 PF11838 ERAP1-like C-terminal domain OIO60_05850 PF01433 Peptidase family M1 domain OIO60_05855 PF00117 Glutamine amidotransferase class-I OIO60_06140 PF03869 Arc-like DNA binding domain OIO60_06220 PF13356 Arm DNA-binding domain OIO60_06220 PF00589 Phage integrase family OIO60_06230 PF00854 POT family OIO60_06235 PF03951 Glutamine synthetase, beta-Grasp domain OIO60_06235 PF00120 Glutamine synthetase, catalytic domain OIO60_06240 PF04345 Chorismate lyase OIO60_06245 PF01040 UbiA prenyltransferase family OIO60_06280 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OIO60_06280 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OIO60_06285 PF01784 NIF3 (NGG1p interacting factor 3) OIO60_06290 PF13180 PDZ domain OIO60_06295 PF12627 Probable RNA and SrmB- binding site of polymerase A OIO60_06295 PF01743 Poly A polymerase head domain OIO60_06300 PF03949 Malic enzyme, NAD binding domain OIO60_06300 PF01515 Phosphate acetyl/butaryl transferase OIO60_06300 PF00390 Malic enzyme, N-terminal domain OIO60_06305 PF00563 EAL domain OIO60_06305 PF00990 Diguanylate cyclase, GGDEF domain OIO60_06305 PF03707 Bacterial signalling protein N terminal repeat OIO60_06310 PF04452 RNA methyltransferase OIO60_06315 PF02219 Methylenetetrahydrofolate reductase OIO60_06320 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain OIO60_06320 PF05221 S-adenosyl-L-homocysteine hydrolase OIO60_06335 PF09317 Domain of unknown function (DUF1974) OIO60_06335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_06335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_06340 PF04055 Radical SAM superfamily OIO60_06345 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_06345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OIO60_06355 PF07690 Major Facilitator Superfamily OIO60_06365 PF00557 Metallopeptidase family M24 OIO60_06370 PF00318 Ribosomal protein S2 OIO60_06375 PF00889 Elongation factor TS OIO60_06385 PF12833 Helix-turn-helix domain OIO60_06405 PF05036 Sporulation related domain OIO60_06405 PF03330 Lytic transglycolase OIO60_06410 PF13406 Transglycosylase SLT domain OIO60_06415 PF01098 Cell cycle protein OIO60_06425 PF14489 QueF-like protein OIO60_06425 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term OIO60_06430 PF01061 ABC-2 type transporter OIO60_06435 PF00005 ABC transporter OIO60_06465 PF00464 Serine hydroxymethyltransferase OIO60_06470 PF02321 Outer membrane efflux protein OIO60_06475 PF00873 AcrB/AcrD/AcrF family OIO60_06480 PF13533 Biotin-lipoyl like OIO60_06485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_06485 PF03466 LysR substrate binding domain OIO60_06505 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_06510 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_06515 PF00005 ABC transporter OIO60_06520 PF00893 Small Multidrug Resistance protein OIO60_06525 PF00037 4Fe-4S binding domain OIO60_06530 PF01136 Peptidase family U32 OIO60_06530 PF16325 Peptidase family U32 C-terminal domain OIO60_06535 PF00155 Aminotransferase class I and II OIO60_06535 PF00392 Bacterial regulatory proteins, gntR family OIO60_06540 PF02567 Phenazine biosynthesis-like protein OIO60_06545 PF00175 Oxidoreductase NAD-binding domain OIO60_06545 PF00970 Oxidoreductase FAD-binding domain OIO60_06550 PF01980 tRNA-methyltransferase O OIO60_06550 PF18389 TrmO C-terminal domain OIO60_06560 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OIO60_06560 PF00437 Type II/IV secretion system protein OIO60_06570 PF00072 Response regulator receiver domain OIO60_06570 PF00486 Transcriptional regulatory protein, C terminal OIO60_06575 PF08521 Two-component sensor kinase N-terminal OIO60_06575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_06575 PF00512 His Kinase A (phospho-acceptor) domain OIO60_06585 PF00293 NUDIX domain OIO60_06595 PF00912 Transglycosylase OIO60_06595 PF14814 Bifunctional transglycosylase second domain OIO60_06595 PF00905 Penicillin binding protein transpeptidase domain OIO60_06600 PF01513 ATP-NAD kinase OIO60_06605 PF07023 Protein of unknown function (DUF1315) OIO60_06610 PF00591 Glycosyl transferase family, a/b domain OIO60_06610 PF02885 Glycosyl transferase family, helical bundle domain OIO60_06615 PF00375 Sodium:dicarboxylate symporter family OIO60_06620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_06620 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_06620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_06625 PF00756 Putative esterase OIO60_06630 PF01842 ACT domain OIO60_06630 PF01817 Chorismate mutase type II OIO60_06630 PF00800 Prephenate dehydratase OIO60_06635 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OIO60_06645 PF01546 Peptidase family M20/M25/M40 OIO60_06645 PF07687 Peptidase dimerisation domain OIO60_06650 PF12706 Beta-lactamase superfamily domain OIO60_06660 PF03883 Peroxide stress protein YaaA OIO60_06670 PF05690 Thiazole biosynthesis protein ThiG OIO60_06680 PF04241 Protein of unknown function (DUF423) OIO60_06685 PF04545 Sigma-70, region 4 OIO60_06685 PF04542 Sigma-70 region 2 OIO60_06685 PF00140 Sigma-70 factor, region 1.2 OIO60_06700 PF00313 'Cold-shock' DNA-binding domain OIO60_06705 PF00270 DEAD/DEAH box helicase OIO60_06705 PF00271 Helicase conserved C-terminal domain OIO60_06715 PF00881 Nitroreductase family OIO60_06720 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus OIO60_06720 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus OIO60_06740 PF01180 Dihydroorotate dehydrogenase OIO60_06745 PF02674 Colicin V production protein OIO60_06750 PF00156 Phosphoribosyl transferase domain OIO60_06765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OIO60_06765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OIO60_06770 PF01435 Peptidase family M48 OIO60_06775 PF09424 Yqey-like protein OIO60_06780 PF01165 Ribosomal protein S21 OIO60_06785 PF00814 Glycoprotease family OIO60_06805 PF00069 Protein kinase domain OIO60_06830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_06830 PF03466 LysR substrate binding domain OIO60_06835 PF00202 Aminotransferase class-III OIO60_06840 PF00171 Aldehyde dehydrogenase family OIO60_06845 PF00324 Amino acid permease OIO60_06875 PF04076 Bacterial OB fold (BOF) protein OIO60_06900 PF00561 alpha/beta hydrolase fold OIO60_06905 PF03616 Sodium/glutamate symporter OIO60_06915 PF00392 Bacterial regulatory proteins, gntR family OIO60_06915 PF07729 FCD domain OIO60_06965 PF08946 Osmosensory transporter coiled coil OIO60_06965 PF00083 Sugar (and other) transporter OIO60_06990 PF00155 Aminotransferase class I and II OIO60_06995 PF02080 TrkA-C domain OIO60_06995 PF06826 Predicted Permease Membrane Region OIO60_07005 PF04403 Paraquat-inducible protein A OIO60_07010 PF02470 MlaD protein OIO60_07020 PF01177 Asp/Glu/Hydantoin racemase OIO60_07025 PF00892 EamA-like transporter family OIO60_07030 PF07995 Glucose / Sorbosone dehydrogenase OIO60_07050 PF00375 Sodium:dicarboxylate symporter family OIO60_07060 PF16123 Hydroxyacylglutathione hydrolase C-terminus OIO60_07060 PF00753 Metallo-beta-lactamase superfamily OIO60_07065 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_07070 PF00005 ABC transporter OIO60_07070 PF09383 NIL domain OIO60_07075 PF03180 NLPA lipoprotein OIO60_07080 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain OIO60_07080 PF02843 Phosphoribosylglycinamide synthetase, C domain OIO60_07080 PF02844 Phosphoribosylglycinamide synthetase, N domain OIO60_07085 PF01808 AICARFT/IMPCHase bienzyme OIO60_07085 PF02142 MGS-like domain OIO60_07090 PF02954 Bacterial regulatory protein, Fis family OIO60_07110 PF13932 GidA associated domain OIO60_07110 PF01134 Glucose inhibited division protein A OIO60_07120 PF14403 Circularly permuted ATP-grasp type 2 OIO60_07130 PF08379 Bacterial transglutaminase-like N-terminal region OIO60_07130 PF01841 Transglutaminase-like superfamily OIO60_07140 PF01168 Alanine racemase, N-terminal domain OIO60_07140 PF00842 Alanine racemase, C-terminal domain OIO60_07145 PF00772 DnaB-like helicase N terminal domain OIO60_07145 PF03796 DnaB-like helicase C terminal domain OIO60_07150 PF01281 Ribosomal protein L9, N-terminal domain OIO60_07150 PF03948 Ribosomal protein L9, C-terminal domain OIO60_07155 PF01084 Ribosomal protein S18 OIO60_07160 PF01250 Ribosomal protein S6 OIO60_07165 PF01040 UbiA prenyltransferase family OIO60_07170 PF03626 Prokaryotic Cytochrome C oxidase subunit IV OIO60_07175 PF00510 Cytochrome c oxidase subunit III OIO60_07180 PF00115 Cytochrome C and Quinol oxidase polypeptide I OIO60_07185 PF00116 Cytochrome C oxidase subunit II, periplasmic domain OIO60_07185 PF06481 COX Aromatic Rich Motif OIO60_07195 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain OIO60_07195 PF00391 PEP-utilising enzyme, mobile domain OIO60_07195 PF02896 PEP-utilising enzyme, TIM barrel domain OIO60_07200 PF03618 Kinase/pyrophosphorylase OIO60_07210 PF14883 Hypothetical glycosyl hydrolase family 13 OIO60_07210 PF01522 Polysaccharide deacetylase OIO60_07215 PF00535 Glycosyl transferase family 2 OIO60_07220 PF13994 PgaD-like protein OIO60_07230 PF00296 Luciferase-like monooxygenase OIO60_07245 PF03466 LysR substrate binding domain OIO60_07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_07255 PF00472 RF-1 domain OIO60_07255 PF03462 PCRF domain OIO60_07260 PF13847 Methyltransferase domain OIO60_07260 PF17827 PrmC N-terminal domain OIO60_07265 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_07270 PF09084 NMT1/THI5 like OIO60_07275 PF12833 Helix-turn-helix domain OIO60_07280 PF00106 short chain dehydrogenase OIO60_07285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_07285 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_07285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_07290 PF00501 AMP-binding enzyme OIO60_07290 PF13193 AMP-binding enzyme C-terminal domain OIO60_07295 PF01613 Flavin reductase like domain OIO60_07300 PF00899 ThiF family OIO60_07305 PF03109 ABC1 family OIO60_07320 PF03814 Potassium-transporting ATPase A subunit OIO60_07330 PF02669 K+-transporting ATPase, c chain OIO60_07335 PF02702 Osmosensitive K+ channel His kinase sensor domain OIO60_07335 PF13493 Domain of unknown function (DUF4118) OIO60_07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_07335 PF00512 His Kinase A (phospho-acceptor) domain OIO60_07340 PF00072 Response regulator receiver domain OIO60_07340 PF00486 Transcriptional regulatory protein, C terminal OIO60_07345 PF00120 Glutamine synthetase, catalytic domain OIO60_07355 PF03232 Ubiquinone biosynthesis protein COQ7 OIO60_07360 PF07690 Major Facilitator Superfamily OIO60_07365 PF01103 Surface antigen OIO60_07365 PF17243 POTRA domain TamA domain 1 OIO60_07365 PF07244 Surface antigen variable number repeat OIO60_07380 PF11791 Aconitate B N-terminal domain OIO60_07380 PF06434 Aconitate hydratase 2 N-terminus OIO60_07380 PF00330 Aconitase family (aconitate hydratase) OIO60_07390 PF00027 Cyclic nucleotide-binding domain OIO60_07390 PF00520 Ion transport protein OIO60_07395 PF07690 Major Facilitator Superfamily OIO60_07410 PF03466 LysR substrate binding domain OIO60_07410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_07415 PF04284 Protein of unknown function (DUF441) OIO60_07425 PF01479 S4 domain OIO60_07425 PF00849 RNA pseudouridylate synthase OIO60_07440 PF01479 S4 domain OIO60_07440 PF00849 RNA pseudouridylate synthase OIO60_07445 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE OIO60_07450 PF08676 MutL C terminal dimerisation domain OIO60_07450 PF01119 DNA mismatch repair protein, C-terminal domain OIO60_07460 PF17209 Hfq protein OIO60_07470 PF00881 Nitroreductase family OIO60_07480 PF00149 Calcineurin-like phosphoesterase OIO60_07485 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OIO60_07490 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain OIO60_07490 PF00749 tRNA synthetases class I (E and Q), catalytic domain OIO60_07495 PF02540 NAD synthase OIO60_07495 PF00958 GMP synthase C terminal domain OIO60_07495 PF00117 Glutamine amidotransferase class-I OIO60_07500 PF05985 Ethanolamine ammonia-lyase light chain (EutC) OIO60_07505 PF06751 Ethanolamine ammonia lyase large subunit (EutB) OIO60_07510 PF13520 Amino acid permease OIO60_07515 PF00171 Aldehyde dehydrogenase family OIO60_07530 PF00465 Iron-containing alcohol dehydrogenase OIO60_07535 PF14493 Helix-turn-helix domain OIO60_07535 PF05970 PIF1-like helicase OIO60_07545 PF06445 GyrI-like small molecule binding domain OIO60_07550 PF02110 Hydroxyethylthiazole kinase family OIO60_07565 PF11940 Domain of unknown function (DUF3458) Ig-like fold OIO60_07565 PF17432 Domain of unknown function (DUF3458_C) ARM repeats OIO60_07565 PF01433 Peptidase family M1 domain OIO60_07575 PF00106 short chain dehydrogenase OIO60_07585 PF01817 Chorismate mutase type II OIO60_07590 PF01037 Lrp/AsnC ligand binding domain OIO60_07605 PF00440 Bacterial regulatory proteins, tetR family OIO60_07610 PF00593 TonB dependent receptor OIO60_07610 PF07715 TonB-dependent Receptor Plug Domain OIO60_07615 PF00924 Mechanosensitive ion channel OIO60_07645 PF00593 TonB dependent receptor OIO60_07645 PF07715 TonB-dependent Receptor Plug Domain OIO60_07665 PF00005 ABC transporter OIO60_07665 PF12848 ABC transporter OIO60_07670 PF00582 Universal stress protein family OIO60_07695 PF00690 Cation transporter/ATPase, N-terminus OIO60_07695 PF00689 Cation transporting ATPase, C-terminus OIO60_07700 PF02308 MgtC family OIO60_07705 PF03594 Benzoate membrane transport protein OIO60_07710 PF01037 Lrp/AsnC ligand binding domain OIO60_07715 PF01810 LysE type translocator OIO60_07720 PF00923 Transaldolase/Fructose-6-phosphate aldolase OIO60_07725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_07725 PF03466 LysR substrate binding domain OIO60_07735 PF02803 Thiolase, C-terminal domain OIO60_07735 PF00108 Thiolase, N-terminal domain OIO60_07745 PF01575 MaoC like domain OIO60_07750 PF00144 Beta-lactamase OIO60_07760 PF07690 Major Facilitator Superfamily OIO60_07765 PF12169 DNA polymerase III subunits gamma and tau domain III OIO60_07765 PF12170 DNA polymerase III tau subunit V interacting with alpha OIO60_07765 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding OIO60_07770 PF05506 Domain of unknown function (DUF756) OIO60_07770 PF04185 Phosphoesterase family OIO60_07775 PF03061 Thioesterase superfamily OIO60_07780 PF00465 Iron-containing alcohol dehydrogenase OIO60_07790 PF01451 Low molecular weight phosphotyrosine protein phosphatase OIO60_07795 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain OIO60_07795 PF01565 FAD binding domain OIO60_07810 PF01645 Conserved region in glutamate synthase OIO60_07925 PF00772 DnaB-like helicase N terminal domain OIO60_07925 PF03796 DnaB-like helicase C terminal domain OIO60_08180 PF12832 MFS_1 like family OIO60_08190 PF00289 Biotin carboxylase, N-terminal domain OIO60_08190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OIO60_08190 PF02785 Biotin carboxylase C-terminal domain OIO60_08195 PF00364 Biotin-requiring enzyme OIO60_08200 PF01220 Dehydroquinase class II OIO60_08205 PF13438 Domain of unknown function (DUF4113) OIO60_08205 PF11799 impB/mucB/samB family C-terminal domain OIO60_08205 PF00817 impB/mucB/samB family OIO60_08215 PF00005 ABC transporter OIO60_08220 PF00486 Transcriptional regulatory protein, C terminal OIO60_08220 PF00072 Response regulator receiver domain OIO60_08230 PF18267 Rubredoxin NAD+ reductase C-terminal domain OIO60_08230 PF13806 Rieske-like [2Fe-2S] domain OIO60_08230 PF04324 BFD-like [2Fe-2S] binding domain OIO60_08230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OIO60_08230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OIO60_08230 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_08235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OIO60_08235 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_08235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OIO60_08235 PF04324 BFD-like [2Fe-2S] binding domain OIO60_08235 PF18267 Rubredoxin NAD+ reductase C-terminal domain OIO60_08240 PF04324 BFD-like [2Fe-2S] binding domain OIO60_08240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain OIO60_08240 PF01568 Molydopterin dinucleotide binding domain OIO60_08240 PF00384 Molybdopterin oxidoreductase OIO60_08245 PF12804 MobA-like NTP transferase domain OIO60_08250 PF00384 Molybdopterin oxidoreductase OIO60_08250 PF01568 Molydopterin dinucleotide binding domain OIO60_08250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain OIO60_08255 PF04055 Radical SAM superfamily OIO60_08255 PF06463 Molybdenum Cofactor Synthesis C OIO60_08265 PF02391 MoaE protein OIO60_08270 PF01967 MoaC family OIO60_08270 PF00994 Probable molybdopterin binding domain OIO60_08275 PF00994 Probable molybdopterin binding domain OIO60_08275 PF03454 MoeA C-terminal region (domain IV) OIO60_08275 PF03453 MoeA N-terminal region (domain I and II) OIO60_08280 PF01638 HxlR-like helix-turn-helix OIO60_08285 PF00392 Bacterial regulatory proteins, gntR family OIO60_08285 PF00155 Aminotransferase class I and II OIO60_08290 PF00892 EamA-like transporter family OIO60_08310 PF02635 DsrE/DsrF-like family OIO60_08315 PF16363 GDP-mannose 4,6 dehydratase OIO60_08320 PF10415 Fumarase C C-terminus OIO60_08320 PF00206 Lyase OIO60_08340 PF01266 FAD dependent oxidoreductase OIO60_08350 PF02542 YgbB family OIO60_08360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OIO60_08360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OIO60_08370 PF00158 Sigma-54 interaction domain OIO60_08370 PF00072 Response regulator receiver domain OIO60_08370 PF02954 Bacterial regulatory protein, Fis family OIO60_08375 PF00989 PAS fold OIO60_08375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_08375 PF00512 His Kinase A (phospho-acceptor) domain OIO60_08380 PF04055 Radical SAM superfamily OIO60_08380 PF18693 TRAM domain OIO60_08380 PF00919 Uncharacterized protein family UPF0004 OIO60_08385 PF00696 Amino acid kinase family OIO60_08390 PF01765 Ribosome recycling factor OIO60_08395 PF01255 Putative undecaprenyl diphosphate synthase OIO60_08405 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase OIO60_08405 PF13288 DXP reductoisomerase C-terminal domain OIO60_08405 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain OIO60_08410 PF13180 PDZ domain OIO60_08410 PF17820 PDZ domain OIO60_08410 PF02163 Peptidase family M50 OIO60_08415 PF01103 Surface antigen OIO60_08415 PF07244 Surface antigen variable number repeat OIO60_08425 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_08425 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD OIO60_08430 PF07977 FabA-like domain OIO60_08435 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 OIO60_08435 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_08450 PF02631 RecX family OIO60_08455 PF00154 recA bacterial DNA recombination protein OIO60_08460 PF01479 S4 domain OIO60_08465 PF13419 Haloacid dehalogenase-like hydrolase OIO60_08470 PF13610 DDE domain OIO60_08475 PF02753 Pili assembly chaperone PapD, C-terminal domain OIO60_08475 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain OIO60_08480 PF16970 Type-1 fimbrial protein, A OIO60_08495 PF06968 Biotin and Thiamin Synthesis associated domain OIO60_08495 PF04055 Radical SAM superfamily OIO60_08500 PF08331 Domain of unknown function (DUF1730) OIO60_08505 PF03853 YjeF-related protein N-terminus OIO60_08505 PF01256 Carbohydrate kinase OIO60_08510 PF02075 Crossover junction endodeoxyribonuclease RuvC OIO60_08525 PF00905 Penicillin binding protein transpeptidase domain OIO60_08550 PF02773 S-adenosylmethionine synthetase, C-terminal domain OIO60_08550 PF02772 S-adenosylmethionine synthetase, central domain OIO60_08550 PF00438 S-adenosylmethionine synthetase, N-terminal domain OIO60_08555 PF02779 Transketolase, pyrimidine binding domain OIO60_08555 PF02780 Transketolase, C-terminal domain OIO60_08555 PF00456 Transketolase, thiamine diphosphate binding domain OIO60_08565 PF04264 YceI-like domain OIO60_08575 PF09992 Phosphodiester glycosidase OIO60_08585 PF05958 tRNA (Uracil-5-)-methyltransferase OIO60_08590 PF04229 GrpB protein OIO60_08595 PF00171 Aldehyde dehydrogenase family OIO60_08595 PF14850 DNA-binding domain of Proline dehydrogenase OIO60_08595 PF18327 Proline utilization A proline dehydrogenase N-terminal domain OIO60_08595 PF01619 Proline dehydrogenase OIO60_08600 PF01037 Lrp/AsnC ligand binding domain OIO60_08605 PF00474 Sodium:solute symporter family OIO60_08610 PF02146 Sir2 family OIO60_08615 PF01597 Glycine cleavage H-protein OIO60_08620 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term OIO60_08620 PF12833 Helix-turn-helix domain OIO60_08630 PF00664 ABC transporter transmembrane region OIO60_08630 PF00005 ABC transporter OIO60_08635 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) OIO60_08640 PF06912 Protein of unknown function (DUF1275) OIO60_08645 PF00375 Sodium:dicarboxylate symporter family OIO60_08660 PF08007 Cupin superfamily protein OIO60_08665 PF02545 Maf-like protein OIO60_08675 PF00162 Phosphoglycerate kinase OIO60_08685 PF01116 Fructose-bisphosphate aldolase class-II OIO60_08690 PF00639 PPIC-type PPIASE domain OIO60_08690 PF09312 SurA N-terminal domain OIO60_08695 PF04453 LPS transport system D OIO60_08695 PF03968 OstA-like protein OIO60_08700 PF01636 Phosphotransferase enzyme family OIO60_08705 PF00483 Nucleotidyl transferase OIO60_08710 PF02527 rRNA small subunit methyltransferase G OIO60_08715 PF13614 AAA domain OIO60_08720 PF17762 HTH domain found in ParB protein OIO60_08720 PF02195 ParB-like nuclease domain OIO60_08725 PF01618 MotA/TolQ/ExbB proton channel family OIO60_08735 PF00005 ABC transporter OIO60_08735 PF00664 ABC transporter transmembrane region OIO60_08740 PF02606 Tetraacyldisaccharide-1-P 4'-kinase OIO60_08745 PF02348 Cytidylyltransferase OIO60_08750 PF09115 DNA polymerase III, delta subunit, C terminal OIO60_08760 PF01026 TatD related DNase OIO60_08775 PF02501 Type II secretion system (T2SS), protein I OIO60_08775 PF07963 Prokaryotic N-terminal methylation motif OIO60_08780 PF11612 Type II secretion system (T2SS), protein J OIO60_08780 PF07963 Prokaryotic N-terminal methylation motif OIO60_08785 PF03934 Type II secretion system (T2SS), protein K OIO60_08795 PF03167 Uracil DNA glycosylase superfamily OIO60_08805 PF14437 MafB19-like deaminase OIO60_08815 PF02224 Cytidylate kinase OIO60_08820 PF00575 S1 RNA binding domain OIO60_08825 PF00216 Bacterial DNA-binding protein OIO60_08835 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family OIO60_08845 PF00743 Flavin-binding monooxygenase-like OIO60_08855 PF03969 AFG1-like ATPase OIO60_08860 PF01274 Malate synthase OIO60_08870 PF02472 Biopolymer transport protein ExbD/TolR OIO60_08875 PF02472 Biopolymer transport protein ExbD/TolR OIO60_08880 PF01618 MotA/TolQ/ExbB proton channel family OIO60_08890 PF07715 TonB-dependent Receptor Plug Domain OIO60_08890 PF00593 TonB dependent receptor OIO60_08910 PF01432 Peptidase family M3 OIO60_08915 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_08920 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_08925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region OIO60_08925 PF00005 ABC transporter OIO60_08940 PF00459 Inositol monophosphatase family OIO60_08950 PF01649 Ribosomal protein S20 OIO60_08955 PF13460 NAD(P)H-binding OIO60_08960 PF03737 Aldolase/RraA OIO60_08980 PF02559 CarD-like/TRCF domain OIO60_08980 PF03461 TRCF domain OIO60_08980 PF17757 UvrB interaction domain OIO60_08980 PF00270 DEAD/DEAH box helicase OIO60_08980 PF00271 Helicase conserved C-terminal domain OIO60_08990 PF00211 Adenylate and Guanylate cyclase catalytic domain OIO60_08995 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO60_09000 PF00012 Hsp70 protein OIO60_09005 PF00226 DnaJ domain OIO60_09005 PF07743 HSCB C-terminal oligomerisation domain OIO60_09010 PF01521 Iron-sulphur cluster biosynthesis OIO60_09015 PF01592 NifU-like N terminal domain OIO60_09020 PF00266 Aminotransferase class-V OIO60_09025 PF02082 Transcriptional regulator OIO60_09040 PF00216 Bacterial DNA-binding protein OIO60_09045 PF09312 SurA N-terminal domain OIO60_09045 PF00639 PPIC-type PPIASE domain OIO60_09050 PF12852 Cupin OIO60_09050 PF12833 Helix-turn-helix domain OIO60_09070 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_09070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_09070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_09075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_09075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_09075 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_09080 PF03109 ABC1 family OIO60_09090 PF04073 Aminoacyl-tRNA editing domain OIO60_09095 PF04183 IucA / IucC family OIO60_09095 PF06276 Ferric iron reductase FhuF-like transporter OIO60_09100 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) OIO60_09105 PF07690 Major Facilitator Superfamily OIO60_09110 PF06276 Ferric iron reductase FhuF-like transporter OIO60_09110 PF04183 IucA / IucC family OIO60_09115 PF04183 IucA / IucC family OIO60_09115 PF06276 Ferric iron reductase FhuF-like transporter OIO60_09130 PF00593 TonB dependent receptor OIO60_09130 PF07715 TonB-dependent Receptor Plug Domain OIO60_09155 PF13419 Haloacid dehalogenase-like hydrolase OIO60_09165 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase OIO60_09170 PF02277 Phosphoribosyltransferase OIO60_09185 PF02654 Cobalamin-5-phosphate synthase OIO60_09190 PF00793 DAHP synthetase I family OIO60_09195 PF01925 Sulfite exporter TauE/SafE OIO60_09215 PF00593 TonB dependent receptor OIO60_09215 PF07715 TonB-dependent Receptor Plug Domain OIO60_09220 PF02684 Lipid-A-disaccharide synthetase OIO60_09230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO60_09235 PF00005 ABC transporter OIO60_09270 PF01230 HIT domain OIO60_09300 PF08241 Methyltransferase domain OIO60_09305 PF00561 alpha/beta hydrolase fold OIO60_09310 PF01053 Cys/Met metabolism PLP-dependent enzyme OIO60_09320 PF02575 YbaB/EbfC DNA-binding family OIO60_09325 PF02132 RecR protein OIO60_09325 PF13662 Toprim domain OIO60_09330 PF01612 3'-5' exonuclease OIO60_09330 PF00570 HRDC domain OIO60_09350 PF05166 YcgL domain OIO60_09360 PF00004 ATPase family associated with various cellular activities (AAA) OIO60_09360 PF17862 AAA+ lid domain OIO60_09360 PF01434 Peptidase family M41 OIO60_09370 PF00291 Pyridoxal-phosphate dependent enzyme OIO60_09375 PF05175 Methyltransferase small domain OIO60_09380 PF01264 Chorismate synthase OIO60_09385 PF08448 PAS fold OIO60_09385 PF00990 Diguanylate cyclase, GGDEF domain OIO60_09400 PF04055 Radical SAM superfamily OIO60_09405 PF00676 Dehydrogenase E1 component OIO60_09410 PF02779 Transketolase, pyrimidine binding domain OIO60_09410 PF02780 Transketolase, C-terminal domain OIO60_09415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OIO60_09415 PF00364 Biotin-requiring enzyme OIO60_09415 PF02817 e3 binding domain OIO60_09420 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_09420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OIO60_09425 PF00106 short chain dehydrogenase OIO60_09430 PF00107 Zinc-binding dehydrogenase OIO60_09430 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_09435 PF01062 Bestrophin, RFP-TM, chloride channel OIO60_09440 PF00158 Sigma-54 interaction domain OIO60_09440 PF02954 Bacterial regulatory protein, Fis family OIO60_09440 PF00072 Response regulator receiver domain OIO60_09445 PF04273 Putative phosphatase (DUF442) OIO60_09445 PF00753 Metallo-beta-lactamase superfamily OIO60_09460 PF01925 Sulfite exporter TauE/SafE OIO60_09475 PF12833 Helix-turn-helix domain OIO60_09475 PF06445 GyrI-like small molecule binding domain OIO60_09480 PF01638 HxlR-like helix-turn-helix OIO60_09485 PF02525 Flavodoxin-like fold OIO60_09495 PF07702 UTRA domain OIO60_09495 PF00392 Bacterial regulatory proteins, gntR family OIO60_09510 PF04069 Substrate binding domain of ABC-type glycine betaine transport system OIO60_09515 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_09520 PF00005 ABC transporter OIO60_09535 PF00083 Sugar (and other) transporter OIO60_09540 PF07715 TonB-dependent Receptor Plug Domain OIO60_09540 PF00593 TonB dependent receptor OIO60_09545 PF00206 Lyase OIO60_09545 PF10415 Fumarase C C-terminus OIO60_09560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_09560 PF03466 LysR substrate binding domain OIO60_09565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_09565 PF03466 LysR substrate binding domain OIO60_09570 PF00108 Thiolase, N-terminal domain OIO60_09570 PF02803 Thiolase, C-terminal domain OIO60_09575 PF02667 Short chain fatty acid transporter OIO60_09580 PF01144 Coenzyme A transferase OIO60_09585 PF01144 Coenzyme A transferase OIO60_09590 PF03466 LysR substrate binding domain OIO60_09590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_09615 PF12833 Helix-turn-helix domain OIO60_09615 PF06719 AraC-type transcriptional regulator N-terminus OIO60_09620 PF07690 Major Facilitator Superfamily OIO60_09625 PF01738 Dienelactone hydrolase family OIO60_09640 PF01613 Flavin reductase like domain OIO60_09650 PF14525 AraC-binding-like domain OIO60_09650 PF12833 Helix-turn-helix domain OIO60_09655 PF00970 Oxidoreductase FAD-binding domain OIO60_09655 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO60_09655 PF00175 Oxidoreductase NAD-binding domain OIO60_09660 PF00866 Ring hydroxylating beta subunit OIO60_09665 PF00355 Rieske [2Fe-2S] domain OIO60_09665 PF00848 Ring hydroxylating alpha subunit (catalytic domain) OIO60_09670 PF03459 TOBE domain OIO60_09670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_09680 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_09685 PF03459 TOBE domain OIO60_09685 PF00005 ABC transporter OIO60_09690 PF00106 short chain dehydrogenase OIO60_09695 PF00550 Phosphopantetheine attachment site OIO60_09695 PF00857 Isochorismatase family OIO60_09705 PF00149 Calcineurin-like phosphoesterase OIO60_09710 PF02503 Polyphosphate kinase middle domain OIO60_09710 PF13090 Polyphosphate kinase C-terminal domain 2 OIO60_09710 PF17941 Polyphosphate kinase C-terminal domain 1 OIO60_09710 PF13089 Polyphosphate kinase N-terminal domain OIO60_09715 PF08042 PqqA family OIO60_09720 PF12706 Beta-lactamase superfamily domain OIO60_09725 PF03070 TENA/THI-4/PQQC family OIO60_09730 PF05402 Coenzyme PQQ synthesis protein D (PqqD) OIO60_09735 PF04055 Radical SAM superfamily OIO60_09735 PF13186 Iron-sulfur cluster-binding domain OIO60_09740 PF01244 Membrane dipeptidase (Peptidase family M19) OIO60_09755 PF13091 PLD-like domain OIO60_09770 PF00199 Catalase OIO60_09780 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_09780 PF00107 Zinc-binding dehydrogenase OIO60_09790 PF00419 Fimbrial protein OIO60_09795 PF13953 PapC C-terminal domain OIO60_09795 PF13954 PapC N-terminal domain OIO60_09795 PF00577 Outer membrane usher protein OIO60_09800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain OIO60_09800 PF02753 Pili assembly chaperone PapD, C-terminal domain OIO60_09810 PF16970 Type-1 fimbrial protein, A OIO60_09830 PF01266 FAD dependent oxidoreductase OIO60_09845 PF01593 Flavin containing amine oxidoreductase OIO60_09850 PF00743 Flavin-binding monooxygenase-like OIO60_09855 PF12146 Serine aminopeptidase, S33 OIO60_09860 PF02321 Outer membrane efflux protein OIO60_09865 PF00873 AcrB/AcrD/AcrF family OIO60_09870 PF00529 HlyD membrane-fusion protein of T1SS OIO60_09870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO60_09875 PF00072 Response regulator receiver domain OIO60_09875 PF00486 Transcriptional regulatory protein, C terminal OIO60_09880 PF16527 Two-component sensor protein CpxA, periplasmic domain OIO60_09880 PF00512 His Kinase A (phospho-acceptor) domain OIO60_09880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_09880 PF00672 HAMP domain OIO60_09890 PF02311 AraC-like ligand binding domain OIO60_09890 PF12833 Helix-turn-helix domain OIO60_09895 PF12146 Serine aminopeptidase, S33 OIO60_09945 PF02824 TGS domain OIO60_09945 PF04607 Region found in RelA / SpoT proteins OIO60_09945 PF13291 ACT domain OIO60_09955 PF01975 Survival protein SurE OIO60_09980 PF07690 Major Facilitator Superfamily OIO60_09985 PF13533 Biotin-lipoyl like OIO60_09990 PF01425 Amidase OIO60_09995 PF00196 Bacterial regulatory proteins, luxR family OIO60_10070 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family OIO60_10075 PF14572 Phosphoribosyl synthetase-associated domain OIO60_10075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase OIO60_10095 PF00005 ABC transporter OIO60_10100 PF01032 FecCD transport family OIO60_10110 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_10110 PF00107 Zinc-binding dehydrogenase OIO60_10125 PF12833 Helix-turn-helix domain OIO60_10125 PF06719 AraC-type transcriptional regulator N-terminus OIO60_10130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OIO60_10130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OIO60_10135 PF07690 Major Facilitator Superfamily OIO60_10140 PF01370 NAD dependent epimerase/dehydratase family OIO60_10145 PF03466 LysR substrate binding domain OIO60_10145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_10155 PF00920 Dehydratase family OIO60_10160 PF00171 Aldehyde dehydrogenase family OIO60_10175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO60_10175 PF00529 HlyD membrane-fusion protein of T1SS OIO60_10210 PF03737 Aldolase/RraA OIO60_10215 PF01842 ACT domain OIO60_10215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OIO60_10215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OIO60_10220 PF07690 Major Facilitator Superfamily OIO60_10240 PF03466 LysR substrate binding domain OIO60_10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_10250 PF08450 SMP-30/Gluconolactonase/LRE-like region OIO60_10255 PF07702 UTRA domain OIO60_10255 PF00392 Bacterial regulatory proteins, gntR family OIO60_10265 PF04909 Amidohydrolase OIO60_10270 PF07690 Major Facilitator Superfamily OIO60_10285 PF04829 Pre-toxin domain with VENN motif OIO60_10285 PF13018 Extended Signal Peptide of Type V secretion system OIO60_10285 PF05860 haemagglutination activity domain OIO60_10285 PF13332 Hemagglutinin repeat OIO60_10290 PF17287 POTRA domain OIO60_10290 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB OIO60_10290 PF08479 POTRA domain, ShlB-type OIO60_10300 PF01546 Peptidase family M20/M25/M40 OIO60_10300 PF07687 Peptidase dimerisation domain OIO60_10310 PF00999 Sodium/hydrogen exchanger family OIO60_10310 PF02254 TrkA-N domain OIO60_10315 PF07995 Glucose / Sorbosone dehydrogenase OIO60_10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_10320 PF03466 LysR substrate binding domain OIO60_10330 PF00857 Isochorismatase family OIO60_10340 PF00440 Bacterial regulatory proteins, tetR family OIO60_10340 PF08359 YsiA-like protein, C-terminal region OIO60_10345 PF12706 Beta-lactamase superfamily domain OIO60_10355 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_10365 PF09278 MerR, DNA binding OIO60_10365 PF00376 MerR family regulatory protein OIO60_10370 PF01872 RibD C-terminal domain OIO60_10375 PF00106 short chain dehydrogenase OIO60_10380 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_10380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO60_10385 PF01047 MarR family OIO60_10390 PF07859 alpha/beta hydrolase fold OIO60_10405 PF00199 Catalase OIO60_10405 PF06628 Catalase-related immune-responsive OIO60_10410 PF00561 alpha/beta hydrolase fold OIO60_10420 PF00171 Aldehyde dehydrogenase family OIO60_10425 PF00107 Zinc-binding dehydrogenase OIO60_10425 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_10430 PF00474 Sodium:solute symporter family OIO60_10435 PF04341 Protein of unknown function, DUF485 OIO60_10440 PF00501 AMP-binding enzyme OIO60_10440 PF13193 AMP-binding enzyme C-terminal domain OIO60_10445 PF00158 Sigma-54 interaction domain OIO60_10445 PF06506 Propionate catabolism activator OIO60_10445 PF02954 Bacterial regulatory protein, Fis family OIO60_10455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_10455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_10455 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_10475 PF00171 Aldehyde dehydrogenase family OIO60_10485 PF07690 Major Facilitator Superfamily OIO60_10490 PF00920 Dehydratase family OIO60_10495 PF00392 Bacterial regulatory proteins, gntR family OIO60_10495 PF07729 FCD domain OIO60_10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_10505 PF03466 LysR substrate binding domain OIO60_10510 PF13378 Enolase C-terminal domain-like OIO60_10510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OIO60_10515 PF02426 Muconolactone delta-isomerase OIO60_10520 PF04444 Catechol dioxygenase N terminus OIO60_10520 PF00775 Dioxygenase OIO60_10525 PF01144 Coenzyme A transferase OIO60_10530 PF01144 Coenzyme A transferase OIO60_10535 PF00108 Thiolase, N-terminal domain OIO60_10535 PF02803 Thiolase, C-terminal domain OIO60_10540 PF12146 Serine aminopeptidase, S33 OIO60_10545 PF01804 Penicillin amidase OIO60_10550 PF00171 Aldehyde dehydrogenase family OIO60_10560 PF02728 Copper amine oxidase, N3 domain OIO60_10560 PF02727 Copper amine oxidase, N2 domain OIO60_10560 PF07833 Copper amine oxidase N-terminal domain OIO60_10560 PF01179 Copper amine oxidase, enzyme domain OIO60_10565 PF02311 AraC-like ligand binding domain OIO60_10565 PF12833 Helix-turn-helix domain OIO60_10570 PF01613 Flavin reductase like domain OIO60_10575 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO60_10575 PF00175 Oxidoreductase NAD-binding domain OIO60_10590 PF00355 Rieske [2Fe-2S] domain OIO60_10590 PF00848 Ring hydroxylating alpha subunit (catalytic domain) OIO60_10605 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OIO60_10610 PF01425 Amidase OIO60_10620 PF07690 Major Facilitator Superfamily OIO60_10630 PF00106 short chain dehydrogenase OIO60_10645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_10645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_10645 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_10650 PF03466 LysR substrate binding domain OIO60_10655 PF09339 IclR helix-turn-helix domain OIO60_10655 PF01614 Bacterial transcriptional regulator OIO60_10660 PF00753 Metallo-beta-lactamase superfamily OIO60_10670 PF04143 Sulphur transport OIO60_10680 PF01011 PQQ enzyme repeat OIO60_10680 PF13360 PQQ-like domain OIO60_10685 PF04966 Carbohydrate-selective porin, OprB family OIO60_10690 PF05048 Periplasmic copper-binding protein (NosD) OIO60_10695 PF01487 Type I 3-dehydroquinase OIO60_10700 PF00775 Dioxygenase OIO60_10705 PF00775 Dioxygenase OIO60_10705 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal OIO60_10710 PF02627 Carboxymuconolactone decarboxylase family OIO60_10715 PF07690 Major Facilitator Superfamily OIO60_10720 PF00561 alpha/beta hydrolase fold OIO60_10725 PF00206 Lyase OIO60_10725 PF10397 Adenylosuccinate lyase C-terminus OIO60_10730 PF00108 Thiolase, N-terminal domain OIO60_10730 PF02803 Thiolase, C-terminal domain OIO60_10735 PF01144 Coenzyme A transferase OIO60_10740 PF01144 Coenzyme A transferase OIO60_10745 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OIO60_10750 PF04977 Septum formation initiator OIO60_10755 PF04239 Protein of unknown function (DUF421) OIO60_10760 PF00113 Enolase, C-terminal TIM barrel domain OIO60_10760 PF03952 Enolase, N-terminal domain OIO60_10765 PF00793 DAHP synthetase I family OIO60_10770 PF00117 Glutamine amidotransferase class-I OIO60_10770 PF06418 CTP synthase N-terminus OIO60_10800 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_10800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO60_10815 PF00793 DAHP synthetase I family OIO60_10820 PF02694 Uncharacterised BCR, YnfA/UPF0060 family OIO60_10825 PF17871 AAA lid domain OIO60_10825 PF00004 ATPase family associated with various cellular activities (AAA) OIO60_10825 PF07724 AAA domain (Cdc48 subfamily) OIO60_10825 PF02861 Clp amino terminal domain, pathogenicity island component OIO60_10825 PF10431 C-terminal, D2-small domain, of ClpB protein OIO60_10830 PF02617 ATP-dependent Clp protease adaptor protein ClpS OIO60_10840 PF02774 Semialdehyde dehydrogenase, dimerisation domain OIO60_10840 PF01118 Semialdehyde dehydrogenase, NAD binding domain OIO60_10855 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) OIO60_10860 PF00585 C-terminal regulatory domain of Threonine dehydratase OIO60_10860 PF00291 Pyridoxal-phosphate dependent enzyme OIO60_10865 PF02254 TrkA-N domain OIO60_10865 PF02080 TrkA-C domain OIO60_10870 PF02386 Cation transport protein OIO60_10875 PF02253 Phospholipase A1 OIO60_10880 PF00675 Insulinase (Peptidase family M16) OIO60_10880 PF08367 Peptidase M16C associated OIO60_10880 PF05193 Peptidase M16 inactive domain OIO60_10885 PF07715 TonB-dependent Receptor Plug Domain OIO60_10885 PF00593 TonB dependent receptor OIO60_10890 PF00294 pfkB family carbohydrate kinase OIO60_10900 PF07290 Protein of unknown function (DUF1449) OIO60_10910 PF01654 Cytochrome bd terminal oxidase subunit I OIO60_10915 PF02322 Cytochrome bd terminal oxidase subunit II OIO60_10920 PF08173 Membrane bound YbgT-like protein OIO60_10935 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) OIO60_10945 PF00448 SRP54-type protein, GTPase domain OIO60_10945 PF02881 SRP54-type protein, helical bundle domain OIO60_10970 PF00571 CBS domain OIO60_10970 PF00478 IMP dehydrogenase / GMP reductase domain OIO60_10975 PF00202 Aminotransferase class-III OIO60_10980 PF00462 Glutaredoxin OIO60_10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_10990 PF03466 LysR substrate binding domain OIO60_10995 PF00557 Metallopeptidase family M24 OIO60_11000 PF05525 Branched-chain amino acid transport protein OIO60_11025 PF00391 PEP-utilising enzyme, mobile domain OIO60_11025 PF05524 PEP-utilising enzyme, N-terminal OIO60_11025 PF02896 PEP-utilising enzyme, TIM barrel domain OIO60_11025 PF00381 PTS HPr component phosphorylation site OIO60_11025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OIO60_11030 PF00294 pfkB family carbohydrate kinase OIO60_11035 PF02378 Phosphotransferase system, EIIC OIO60_11035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit OIO60_11060 PF13610 DDE domain OIO60_11070 PF01636 Phosphotransferase enzyme family OIO60_11080 PF03050 Transposase IS66 family OIO60_11080 PF13817 IS66 C-terminal element OIO60_11080 PF13007 Transposase C of IS166 homeodomain OIO60_11080 PF13005 zinc-finger binding domain of transposase IS66 OIO60_11100 PF13610 DDE domain OIO60_11105 PF02586 SOS response associated peptidase (SRAP) OIO60_11110 PF07995 Glucose / Sorbosone dehydrogenase OIO60_11125 PF13610 DDE domain OIO60_11150 PF00892 EamA-like transporter family OIO60_11160 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin OIO60_11170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_11170 PF03466 LysR substrate binding domain OIO60_11190 PF00440 Bacterial regulatory proteins, tetR family OIO60_11200 PF01709 Transcriptional regulator OIO60_11205 PF01037 Lrp/AsnC ligand binding domain OIO60_11215 PF00005 ABC transporter OIO60_11220 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_11225 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_11240 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OIO60_11240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_11250 PF00296 Luciferase-like monooxygenase OIO60_11255 PF03180 NLPA lipoprotein OIO60_11260 PF03180 NLPA lipoprotein OIO60_11265 PF00005 ABC transporter OIO60_11265 PF09383 NIL domain OIO60_11270 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_11275 PF01926 50S ribosome-binding GTPase OIO60_11275 PF06071 Protein of unknown function (DUF933) OIO60_11300 PF03591 AzlC protein OIO60_11305 PF05437 Branched-chain amino acid transport protein (AzlD) OIO60_11315 PF02222 ATP-grasp domain OIO60_11320 PF01909 Nucleotidyltransferase domain OIO60_11320 PF08335 GlnD PII-uridylyltransferase OIO60_11320 PF01966 HD domain OIO60_11325 PF00155 Aminotransferase class I and II OIO60_11335 PF12852 Cupin OIO60_11335 PF12833 Helix-turn-helix domain OIO60_11340 PF00255 Glutathione peroxidase OIO60_11345 PF01641 SelR domain OIO60_11350 PF00155 Aminotransferase class I and II OIO60_11355 PF00375 Sodium:dicarboxylate symporter family OIO60_11360 PF00710 Asparaginase, N-terminal OIO60_11360 PF17763 Glutaminase/Asparaginase C-terminal domain OIO60_11365 PF07733 Bacterial DNA polymerase III alpha NTPase domain OIO60_11365 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OIO60_11365 PF14579 Helix-hairpin-helix motif OIO60_11365 PF01336 OB-fold nucleic acid binding domain OIO60_11365 PF02811 PHP domain OIO60_11370 PF00588 SpoU rRNA Methylase family OIO60_11375 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_11390 PF13192 Thioredoxin domain OIO60_11390 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_11405 PF03466 LysR substrate binding domain OIO60_11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_11410 PF01758 Sodium Bile acid symporter family OIO60_11415 PF01022 Bacterial regulatory protein, arsR family OIO60_11420 PF03960 ArsC family OIO60_11430 PF13382 Adenine deaminase C-terminal domain OIO60_11430 PF01979 Amidohydrolase family OIO60_11440 PF03466 LysR substrate binding domain OIO60_11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_11450 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin OIO60_11455 PF01177 Asp/Glu/Hydantoin racemase OIO60_11460 PF02668 Taurine catabolism dioxygenase TauD, TfdA family OIO60_11465 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_11470 PF00005 ABC transporter OIO60_11475 PF04069 Substrate binding domain of ABC-type glycine betaine transport system OIO60_11485 PF00083 Sugar (and other) transporter OIO60_11490 PF00296 Luciferase-like monooxygenase OIO60_11495 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_11495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_11495 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OIO60_11505 PF01654 Cytochrome bd terminal oxidase subunit I OIO60_11510 PF02322 Cytochrome bd terminal oxidase subunit II OIO60_11520 PF00392 Bacterial regulatory proteins, gntR family OIO60_11520 PF00155 Aminotransferase class I and II OIO60_11525 PF03466 LysR substrate binding domain OIO60_11525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_11540 PF00698 Acyl transferase domain OIO60_11545 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG OIO60_11555 PF01039 Carboxyl transferase domain OIO60_11560 PF06857 Malonate decarboxylase delta subunit (MdcD) OIO60_11565 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase OIO60_11570 PF16957 Malonate decarboxylase, alpha subunit, transporter OIO60_11575 PF07690 Major Facilitator Superfamily OIO60_11590 PF00155 Aminotransferase class I and II OIO60_11590 PF00392 Bacterial regulatory proteins, gntR family OIO60_11595 PF04172 LrgB-like family OIO60_11600 PF03788 LrgA family OIO60_11605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_11605 PF03466 LysR substrate binding domain OIO60_11610 PF14834 Glutathione S-transferase, C-terminal domain OIO60_11610 PF02798 Glutathione S-transferase, N-terminal domain OIO60_11615 PF02798 Glutathione S-transferase, N-terminal domain OIO60_11620 PF03466 LysR substrate binding domain OIO60_11620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_11630 PF00581 Rhodanese-like domain OIO60_11635 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_11645 PF00266 Aminotransferase class-V OIO60_11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_11660 PF03466 LysR substrate binding domain OIO60_11670 PF00497 Bacterial extracellular solute-binding proteins, family 3 OIO60_11675 PF00497 Bacterial extracellular solute-binding proteins, family 3 OIO60_11680 PF00005 ABC transporter OIO60_11685 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_11690 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_11705 PF00072 Response regulator receiver domain OIO60_11710 PF00072 Response regulator receiver domain OIO60_11710 PF09308 LuxQ, periplasmic OIO60_11710 PF00512 His Kinase A (phospho-acceptor) domain OIO60_11710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_11720 PF13404 AsnC-type helix-turn-helix domain OIO60_11720 PF01037 Lrp/AsnC ligand binding domain OIO60_11730 PF00717 Peptidase S24-like OIO60_11755 PF00199 Catalase OIO60_11755 PF06628 Catalase-related immune-responsive OIO60_11755 PF18011 C-terminal domain found in long catalases OIO60_11765 PF02464 Competence-damaged protein OIO60_11765 PF18146 Damage-inducible protein CinA KH domain OIO60_11765 PF00994 Probable molybdopterin binding domain OIO60_11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_11800 PF03466 LysR substrate binding domain OIO60_11820 PF00501 AMP-binding enzyme OIO60_11820 PF13193 AMP-binding enzyme C-terminal domain OIO60_11825 PF00440 Bacterial regulatory proteins, tetR family OIO60_11830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_11830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_11830 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_11835 PF01039 Carboxyl transferase domain OIO60_11840 PF00378 Enoyl-CoA hydratase/isomerase OIO60_11845 PF00364 Biotin-requiring enzyme OIO60_11845 PF02785 Biotin carboxylase C-terminal domain OIO60_11845 PF00289 Biotin carboxylase, N-terminal domain OIO60_11845 PF18140 Propionyl-coenzyme A carboxylase BT domain OIO60_11845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OIO60_11850 PF00682 HMGL-like OIO60_11855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_11855 PF03466 LysR substrate binding domain OIO60_11870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_11870 PF12806 Acetyl-CoA dehydrogenase C-terminal like OIO60_11870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_11870 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_11880 PF07690 Major Facilitator Superfamily OIO60_11890 PF01144 Coenzyme A transferase OIO60_11895 PF01144 Coenzyme A transferase OIO60_11900 PF07690 Major Facilitator Superfamily OIO60_11905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_11905 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_11905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_11910 PF00378 Enoyl-CoA hydratase/isomerase OIO60_11920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OIO60_11920 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain OIO60_11920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OIO60_11925 PF00108 Thiolase, N-terminal domain OIO60_11925 PF02803 Thiolase, C-terminal domain OIO60_11930 PF09339 IclR helix-turn-helix domain OIO60_11935 PF07690 Major Facilitator Superfamily OIO60_11940 PF03060 Nitronate monooxygenase OIO60_11945 PF00378 Enoyl-CoA hydratase/isomerase OIO60_11950 PF09339 IclR helix-turn-helix domain OIO60_11955 PF02515 CoA-transferase family III OIO60_11960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_11960 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_11960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_11965 PF07690 Major Facilitator Superfamily OIO60_11970 PF13419 Haloacid dehalogenase-like hydrolase OIO60_11975 PF00266 Aminotransferase class-V OIO60_11980 PF01266 FAD dependent oxidoreductase OIO60_11985 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_11990 PF00005 ABC transporter OIO60_11990 PF08402 TOBE domain OIO60_12000 PF00392 Bacterial regulatory proteins, gntR family OIO60_12000 PF07702 UTRA domain OIO60_12005 PF01494 FAD binding domain OIO60_12010 PF09339 IclR helix-turn-helix domain OIO60_12010 PF01614 Bacterial transcriptional regulator OIO60_12015 PF02525 Flavodoxin-like fold OIO60_12020 PF03466 LysR substrate binding domain OIO60_12020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_12025 PF02627 Carboxymuconolactone decarboxylase family OIO60_12030 PF00171 Aldehyde dehydrogenase family OIO60_12040 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin OIO60_12050 PF00171 Aldehyde dehydrogenase family OIO60_12055 PF00296 Luciferase-like monooxygenase OIO60_12060 PF01613 Flavin reductase like domain OIO60_12065 PF12697 Alpha/beta hydrolase family OIO60_12085 PF01292 Prokaryotic cytochrome b561 OIO60_12090 PF00199 Catalase OIO60_12120 PF03061 Thioesterase superfamily OIO60_12125 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_12130 PF07848 PaaX-like protein OIO60_12130 PF08223 PaaX-like protein C-terminal domain OIO60_12135 PF14535 AMP-binding enzyme C-terminal domain OIO60_12135 PF00501 AMP-binding enzyme OIO60_12140 PF00108 Thiolase, N-terminal domain OIO60_12140 PF02803 Thiolase, C-terminal domain OIO60_12145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OIO60_12145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OIO60_12145 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain OIO60_12150 PF00378 Enoyl-CoA hydratase/isomerase OIO60_12155 PF00378 Enoyl-CoA hydratase/isomerase OIO60_12160 PF00970 Oxidoreductase FAD-binding domain OIO60_12160 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO60_12160 PF00175 Oxidoreductase NAD-binding domain OIO60_12165 PF01883 Iron-sulfur cluster assembly protein OIO60_12170 PF05138 Phenylacetic acid catabolic protein OIO60_12175 PF06243 Phenylacetic acid degradation B OIO60_12180 PF05138 Phenylacetic acid catabolic protein OIO60_12185 PF00171 Aldehyde dehydrogenase family OIO60_12185 PF01575 MaoC like domain OIO60_12190 PF03313 Serine dehydratase alpha chain OIO60_12190 PF03315 Serine dehydratase beta chain OIO60_12195 PF13520 Amino acid permease OIO60_12200 PF00171 Aldehyde dehydrogenase family OIO60_12205 PF00083 Sugar (and other) transporter OIO60_12215 PF04324 BFD-like [2Fe-2S] binding domain OIO60_12215 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_12225 PF01266 FAD dependent oxidoreductase OIO60_12230 PF05544 Proline racemase OIO60_12235 PF00392 Bacterial regulatory proteins, gntR family OIO60_12245 PF00701 Dihydrodipicolinate synthetase family OIO60_12255 PF00376 MerR family regulatory protein OIO60_12255 PF09278 MerR, DNA binding OIO60_12270 PF02677 Epoxyqueuosine reductase QueH OIO60_12285 PF07690 Major Facilitator Superfamily OIO60_12290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region OIO60_12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_12300 PF03466 LysR substrate binding domain OIO60_12320 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE OIO60_12325 PF06812 ImpA, N-terminal, type VI secretion system OIO60_12330 PF00004 ATPase family associated with various cellular activities (AAA) OIO60_12330 PF17871 AAA lid domain OIO60_12330 PF10431 C-terminal, D2-small domain, of ClpB protein OIO60_12330 PF07724 AAA domain (Cdc48 subfamily) OIO60_12345 PF00691 OmpA family OIO60_12345 PF01389 OmpA-like transmembrane domain OIO60_12355 PF06761 Intracellular multiplication and human macrophage-killing OIO60_12355 PF14331 ImcF-related N-terminal domain OIO60_12355 PF06744 Type VI secretion protein IcmF C-terminal OIO60_12370 PF05947 Type VI secretion system, TssF OIO60_12385 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath OIO60_12410 PF00005 ABC transporter OIO60_12415 PF00497 Bacterial extracellular solute-binding proteins, family 3 OIO60_12420 PF01425 Amidase OIO60_12425 PF08753 NikR C terminal nickel binding domain OIO60_12425 PF01402 Ribbon-helix-helix protein, copG family OIO60_12445 PF02525 Flavodoxin-like fold OIO60_12450 PF02785 Biotin carboxylase C-terminal domain OIO60_12450 PF00289 Biotin carboxylase, N-terminal domain OIO60_12450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OIO60_12465 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_12465 PF13823 Alcohol dehydrogenase GroES-associated OIO60_12465 PF00107 Zinc-binding dehydrogenase OIO60_12475 PF00440 Bacterial regulatory proteins, tetR family OIO60_12495 PF00654 Voltage gated chloride channel OIO60_12500 PF02785 Biotin carboxylase C-terminal domain OIO60_12500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OIO60_12500 PF00289 Biotin carboxylase, N-terminal domain OIO60_12500 PF00364 Biotin-requiring enzyme OIO60_12510 PF07286 Protein of unknown function (DUF1445) OIO60_12515 PF03746 LamB/YcsF family OIO60_12520 PF01566 Natural resistance-associated macrophage protein OIO60_12525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_12525 PF03466 LysR substrate binding domain OIO60_12540 PF03527 RHS protein OIO60_12540 PF05593 RHS Repeat OIO60_12545 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) OIO60_12545 PF04717 Type VI secretion system, phage-baseplate injector OIO60_12545 PF13296 Putative type VI secretion system Rhs element Vgr OIO60_12555 PF13419 Haloacid dehalogenase-like hydrolase OIO60_12575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OIO60_12575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OIO60_12595 PF07690 Major Facilitator Superfamily OIO60_12610 PF03279 Bacterial lipid A biosynthesis acyltransferase OIO60_12615 PF00563 EAL domain OIO60_12615 PF00990 Diguanylate cyclase, GGDEF domain OIO60_12615 PF03707 Bacterial signalling protein N terminal repeat OIO60_12620 PF00892 EamA-like transporter family OIO60_12625 PF01037 Lrp/AsnC ligand binding domain OIO60_12630 PF01624 MutS domain I OIO60_12630 PF05188 MutS domain II OIO60_12630 PF05190 MutS family domain IV OIO60_12630 PF00488 MutS domain V OIO60_12630 PF05192 MutS domain III OIO60_12640 PF11953 Domain of unknown function (DUF3470) OIO60_12640 PF00037 4Fe-4S binding domain OIO60_12650 PF01596 O-methyltransferase OIO60_12660 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_12665 PF01205 Uncharacterized protein family UPF0029 OIO60_12675 PF00005 ABC transporter OIO60_12675 PF00664 ABC transporter transmembrane region OIO60_12675 PF03412 Peptidase C39 family OIO60_12680 PF02321 Outer membrane efflux protein OIO60_12685 PF12399 Branched-chain amino acid ATP-binding cassette transporter OIO60_12685 PF00005 ABC transporter OIO60_12690 PF03968 OstA-like protein OIO60_12705 PF00571 CBS domain OIO60_12705 PF01380 SIS domain OIO60_12710 PF01406 tRNA synthetases class I (C) catalytic domain OIO60_12710 PF09190 DALR domain OIO60_12735 PF01638 HxlR-like helix-turn-helix OIO60_12740 PF07690 Major Facilitator Superfamily OIO60_12765 PF03807 NADP oxidoreductase coenzyme F420-dependent OIO60_12765 PF14748 Pyrroline-5-carboxylate reductase dimerisation OIO60_12775 PF00313 'Cold-shock' DNA-binding domain OIO60_12780 PF01810 LysE type translocator OIO60_12810 PF13742 OB-fold nucleic acid binding domain OIO60_12810 PF02601 Exonuclease VII, large subunit OIO60_12845 PF00376 MerR family regulatory protein OIO60_12845 PF09278 MerR, DNA binding OIO60_12850 PF00403 Heavy-metal-associated domain OIO60_12855 PF00403 Heavy-metal-associated domain OIO60_12860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_12860 PF03466 LysR substrate binding domain OIO60_12870 PF00848 Ring hydroxylating alpha subunit (catalytic domain) OIO60_12870 PF00355 Rieske [2Fe-2S] domain OIO60_12875 PF00866 Ring hydroxylating beta subunit OIO60_12880 PF00970 Oxidoreductase FAD-binding domain OIO60_12880 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO60_12880 PF00175 Oxidoreductase NAD-binding domain OIO60_12885 PF00106 short chain dehydrogenase OIO60_12890 PF03594 Benzoate membrane transport protein OIO60_12895 PF07690 Major Facilitator Superfamily OIO60_12905 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OIO60_12905 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OIO60_12910 PF00270 DEAD/DEAH box helicase OIO60_12910 PF11898 Domain of unknown function (DUF3418) OIO60_12910 PF04408 Helicase associated domain (HA2) OIO60_12910 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold OIO60_12910 PF00271 Helicase conserved C-terminal domain OIO60_12915 PF10417 C-terminal domain of 1-Cys peroxiredoxin OIO60_12915 PF00578 AhpC/TSA family OIO60_12935 PF13192 Thioredoxin domain OIO60_12935 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_12945 PF02798 Glutathione S-transferase, N-terminal domain OIO60_12945 PF00043 Glutathione S-transferase, C-terminal domain OIO60_12955 PF02390 Putative methyltransferase OIO60_12960 PF00043 Glutathione S-transferase, C-terminal domain OIO60_12960 PF13417 Glutathione S-transferase, N-terminal domain OIO60_12970 PF00691 OmpA family OIO60_12970 PF13488 Glycine zipper OIO60_12975 PF01979 Amidohydrolase family OIO60_12980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OIO60_12980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OIO60_12990 PF01170 Putative RNA methylase family UPF0020 OIO60_12990 PF10672 S-adenosylmethionine-dependent methyltransferase OIO60_12990 PF02926 THUMP domain OIO60_13005 PF17871 AAA lid domain OIO60_13005 PF07724 AAA domain (Cdc48 subfamily) OIO60_13005 PF10431 C-terminal, D2-small domain, of ClpB protein OIO60_13005 PF00004 ATPase family associated with various cellular activities (AAA) OIO60_13005 PF02861 Clp amino terminal domain, pathogenicity island component OIO60_13020 PF02566 OsmC-like protein OIO60_13030 PF00027 Cyclic nucleotide-binding domain OIO60_13030 PF13545 Crp-like helix-turn-helix domain OIO60_13035 PF00248 Aldo/keto reductase family OIO60_13050 PF00709 Adenylosuccinate synthetase OIO60_13055 PF13393 Histidyl-tRNA synthetase OIO60_13060 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain OIO60_13060 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain OIO60_13065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OIO60_13065 PF01411 tRNA synthetases class II (A) OIO60_13065 PF02272 DHHA1 domain OIO60_13070 PF13840 ACT domain OIO60_13070 PF00696 Amino acid kinase family OIO60_13070 PF01842 ACT domain OIO60_13075 PF02599 Global regulator protein family OIO60_13080 PF01351 Ribonuclease HII OIO60_13090 PF01292 Prokaryotic cytochrome b561 OIO60_13095 PF00962 Adenosine/AMP deaminase OIO60_13100 PF00860 Permease family OIO60_13110 PF00743 Flavin-binding monooxygenase-like OIO60_13120 PF13610 DDE domain OIO60_13135 PF13610 DDE domain OIO60_13150 PF00665 Integrase core domain OIO60_13180 PF00582 Universal stress protein family OIO60_13185 PF00916 Sulfate permease family OIO60_13185 PF01740 STAS domain OIO60_13210 PF00905 Penicillin binding protein transpeptidase domain OIO60_13225 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) OIO60_13225 PF13296 Putative type VI secretion system Rhs element Vgr OIO60_13225 PF04717 Type VI secretion system, phage-baseplate injector OIO60_13245 PF03180 NLPA lipoprotein OIO60_13250 PF05987 Bacterial protein of unknown function (DUF898) OIO60_13265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO60_13265 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_13270 PF00764 Arginosuccinate synthase OIO60_13275 PF01590 GAF domain OIO60_13275 PF00563 EAL domain OIO60_13275 PF00990 Diguanylate cyclase, GGDEF domain OIO60_13275 PF00360 Phytochrome region OIO60_13280 PF01979 Amidohydrolase family OIO60_13285 PF00929 Exonuclease OIO60_13310 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_13310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OIO60_13315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region OIO60_13315 PF00005 ABC transporter OIO60_13320 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_13320 PF12911 N-terminal TM domain of oligopeptide transport permease C OIO60_13325 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_13330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle OIO60_13335 PF01476 LysM domain OIO60_13335 PF01464 Transglycosylase SLT domain OIO60_13335 PF01476 LysM domain OIO60_13335 PF01464 Transglycosylase SLT domain OIO60_13340 PF00929 Exonuclease OIO60_13350 PF00293 NUDIX domain OIO60_13350 PF09297 NADH pyrophosphatase zinc ribbon domain OIO60_13360 PF04972 BON domain OIO60_13365 PF02021 Uncharacterised protein family UPF0102 OIO60_13370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OIO60_13380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_13380 PF03466 LysR substrate binding domain OIO60_13385 PF01810 LysE type translocator OIO60_13395 PF13411 MerR HTH family regulatory protein OIO60_13405 PF01494 FAD binding domain OIO60_13410 PF01494 FAD binding domain OIO60_13415 PF00557 Metallopeptidase family M24 OIO60_13415 PF05195 Aminopeptidase P, N-terminal domain OIO60_13455 PF00884 Sulfatase OIO60_13455 PF08019 Phosphoethanolamine transferase EptA/EptB OIO60_13500 PF01476 LysM domain OIO60_13500 PF08525 Opacity-associated protein A N-terminal motif OIO60_13500 PF01551 Peptidase family M23 OIO60_13825 PF01812 5-formyltetrahydrofolate cyclo-ligase family OIO60_13830 PF04355 SmpA / OmlA family OIO60_13830 PF00691 OmpA family OIO60_13835 PF05662 Coiled stalk of trimeric autotransporter adhesin OIO60_13835 PF13018 Extended Signal Peptide of Type V secretion system OIO60_13835 PF03895 YadA-like membrane anchor domain OIO60_13835 PF05658 Head domain of trimeric autotransporter adhesin OIO60_13840 PF02190 ATP-dependent protease La (LON) substrate-binding domain OIO60_13840 PF05362 Lon protease (S16) C-terminal proteolytic domain OIO60_13840 PF00004 ATPase family associated with various cellular activities (AAA) OIO60_13845 PF02590 Predicted SPOUT methyltransferase OIO60_13850 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OIO60_13875 PF00905 Penicillin binding protein transpeptidase domain OIO60_13900 PF00916 Sulfate permease family OIO60_13900 PF01740 STAS domain OIO60_13905 PF00582 Universal stress protein family OIO60_13935 PF00665 Integrase core domain OIO60_13950 PF04060 Putative Fe-S cluster OIO60_13955 PF10576 Iron-sulfur binding domain of endonuclease III OIO60_13955 PF00633 Helix-hairpin-helix motif OIO60_13955 PF00730 HhH-GPD superfamily base excision DNA repair protein OIO60_13965 PF05191 Adenylate kinase, active site lid OIO60_13980 PF00905 Penicillin binding protein transpeptidase domain OIO60_13980 PF03717 Penicillin-binding Protein dimerisation domain OIO60_13995 PF02492 CobW/HypB/UreG, nucleotide-binding domain OIO60_14000 PF01730 UreF OIO60_14005 PF05194 UreE urease accessory protein, C-terminal domain OIO60_14005 PF02814 UreE urease accessory protein, N-terminal domain OIO60_14010 PF01979 Amidohydrolase family OIO60_14010 PF00449 Urease alpha-subunit, N-terminal domain OIO60_14015 PF00699 Urease beta subunit OIO60_14020 PF00547 Urease, gamma subunit OIO60_14025 PF01774 UreD urease accessory protein OIO60_14040 PF00463 Isocitrate lyase family OIO60_14045 PF03466 LysR substrate binding domain OIO60_14045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_14050 PF01595 Cyclin M transmembrane N-terminal domain OIO60_14050 PF03471 Transporter associated domain OIO60_14050 PF00571 CBS domain OIO60_14055 PF03600 Citrate transporter OIO60_14070 PF00009 Elongation factor Tu GTP binding domain OIO60_14075 PF01507 Phosphoadenosine phosphosulfate reductase family OIO60_14085 PF14052 Capsule assembly protein Wzi OIO60_14090 PF00152 tRNA synthetases class II (D, K and N) OIO60_14090 PF01336 OB-fold nucleic acid binding domain OIO60_14105 PF00301 Rubredoxin OIO60_14110 PF18113 Rubredoxin binding C-terminal domain OIO60_14110 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_14115 PF00561 alpha/beta hydrolase fold OIO60_14120 PF03466 LysR substrate binding domain OIO60_14120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_14130 PF02503 Polyphosphate kinase middle domain OIO60_14130 PF13090 Polyphosphate kinase C-terminal domain 2 OIO60_14130 PF17941 Polyphosphate kinase C-terminal domain 1 OIO60_14130 PF13089 Polyphosphate kinase N-terminal domain OIO60_14135 PF00912 Transglycosylase OIO60_14140 PF01694 Rhomboid family OIO60_14150 PF00005 ABC transporter OIO60_14155 PF13472 GDSL-like Lipase/Acylhydrolase family OIO60_14160 PF00484 Carbonic anhydrase OIO60_14165 PF00561 alpha/beta hydrolase fold OIO60_14175 PF07715 TonB-dependent Receptor Plug Domain OIO60_14175 PF00593 TonB dependent receptor OIO60_14180 PF07715 TonB-dependent Receptor Plug Domain OIO60_14180 PF00593 TonB dependent receptor OIO60_14190 PF01521 Iron-sulphur cluster biosynthesis OIO60_14190 PF01106 NifU-like domain OIO60_14200 PF00884 Sulfatase OIO60_14205 PF03781 Sulfatase-modifying factor enzyme 1 OIO60_14220 PF00291 Pyridoxal-phosphate dependent enzyme OIO60_14225 PF01384 Phosphate transporter family OIO60_14230 PF02574 Homocysteine S-methyltransferase OIO60_14230 PF00809 Pterin binding enzyme OIO60_14230 PF02607 B12 binding domain OIO60_14230 PF02310 B12 binding domain OIO60_14230 PF02965 Vitamin B12 dependent methionine synthase, activation domain OIO60_14235 PF02779 Transketolase, pyrimidine binding domain OIO60_14235 PF02780 Transketolase, C-terminal domain OIO60_14240 PF00456 Transketolase, thiamine diphosphate binding domain OIO60_14245 PF07690 Major Facilitator Superfamily OIO60_14255 PF03466 LysR substrate binding domain OIO60_14255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_14265 PF01263 Aldose 1-epimerase OIO60_14270 PF07690 Major Facilitator Superfamily OIO60_14275 PF12833 Helix-turn-helix domain OIO60_14275 PF02311 AraC-like ligand binding domain OIO60_14280 PF04960 Glutaminase OIO60_14285 PF01327 Polypeptide deformylase OIO60_14290 PF07690 Major Facilitator Superfamily OIO60_14300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OIO60_14300 PF00205 Thiamine pyrophosphate enzyme, central domain OIO60_14300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OIO60_14305 PF00171 Aldehyde dehydrogenase family OIO60_14310 PF01958 Domain of unknown function DUF108 OIO60_14310 PF03447 Homoserine dehydrogenase, NAD binding domain OIO60_14320 PF12697 Alpha/beta hydrolase family OIO60_14330 PF07690 Major Facilitator Superfamily OIO60_14335 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_14335 PF14759 Reductase C-terminal OIO60_14340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OIO60_14350 PF00355 Rieske [2Fe-2S] domain OIO60_14360 PF00355 Rieske [2Fe-2S] domain OIO60_14365 PF09339 IclR helix-turn-helix domain OIO60_14365 PF01614 Bacterial transcriptional regulator OIO60_14390 PF00535 Glycosyl transferase family 2 OIO60_14395 PF14883 Hypothetical glycosyl hydrolase family 13 OIO60_14395 PF01522 Polysaccharide deacetylase OIO60_14400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO60_14405 PF07152 YaeQ protein OIO60_14410 PF00375 Sodium:dicarboxylate symporter family OIO60_14415 PF02492 CobW/HypB/UreG, nucleotide-binding domain OIO60_14415 PF07683 Cobalamin synthesis protein cobW C-terminal domain OIO60_14425 PF03061 Thioesterase superfamily OIO60_14435 PF02028 BCCT, betaine/carnitine/choline family transporter OIO60_14440 PF02028 BCCT, betaine/carnitine/choline family transporter OIO60_14445 PF13977 BetI-type transcriptional repressor, C-terminal OIO60_14445 PF00440 Bacterial regulatory proteins, tetR family OIO60_14450 PF00171 Aldehyde dehydrogenase family OIO60_14455 PF05199 GMC oxidoreductase OIO60_14455 PF00732 GMC oxidoreductase OIO60_14460 PF06039 Malate:quinone oxidoreductase (Mqo) OIO60_14470 PF02574 Homocysteine S-methyltransferase OIO60_14475 PF13520 Amino acid permease OIO60_14500 PF01126 Heme oxygenase OIO60_14510 PF04575 Protein of unknown function (DUF560) OIO60_14520 PF07715 TonB-dependent Receptor Plug Domain OIO60_14520 PF00593 TonB dependent receptor OIO60_14530 PF08281 Sigma-70, region 4 OIO60_14530 PF04542 Sigma-70 region 2 OIO60_14540 PF00701 Dihydrodipicolinate synthetase family OIO60_14545 PF00083 Sugar (and other) transporter OIO60_14610 PF00436 Single-strand binding protein family OIO60_14655 PF13356 Arm DNA-binding domain OIO60_14655 PF00589 Phage integrase family OIO60_14670 PF00717 Peptidase S24-like OIO60_14675 PF00817 impB/mucB/samB family OIO60_14675 PF11799 impB/mucB/samB family C-terminal domain OIO60_14675 PF11798 IMS family HHH motif OIO60_14675 PF13438 Domain of unknown function (DUF4113) OIO60_14760 PF00712 DNA polymerase III beta subunit, N-terminal domain OIO60_14760 PF02767 DNA polymerase III beta subunit, central domain OIO60_14760 PF02768 DNA polymerase III beta subunit, C-terminal domain OIO60_14800 PF05016 ParE toxin of type II toxin-antitoxin system, parDE OIO60_15020 PF01695 IstB-like ATP binding protein OIO60_15105 PF00929 Exonuclease OIO60_15180 PF07690 Major Facilitator Superfamily OIO60_15185 PF13533 Biotin-lipoyl like OIO60_15190 PF03061 Thioesterase superfamily OIO60_15195 PF00490 Delta-aminolevulinic acid dehydratase OIO60_15200 PF01266 FAD dependent oxidoreductase OIO60_15205 PF01370 NAD dependent epimerase/dehydratase family OIO60_15205 PF08338 Domain of unknown function (DUF1731) OIO60_15225 PF00149 Calcineurin-like phosphoesterase OIO60_15225 PF12320 Type 5 capsule protein repressor C-terminal domain OIO60_15235 PF01168 Alanine racemase, N-terminal domain OIO60_15240 PF00437 Type II/IV secretion system protein OIO60_15245 PF00437 Type II/IV secretion system protein OIO60_15250 PF01475 Ferric uptake regulator family OIO60_15255 PF04355 SmpA / OmlA family OIO60_15260 PF03658 RnfH family Ubiquitin OIO60_15270 PF01814 Hemerythrin HHE cation binding domain OIO60_15275 PF13230 Glutamine amidotransferases class-II OIO60_15285 PF00696 Amino acid kinase family OIO60_15290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OIO60_15290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OIO60_15290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OIO60_15290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OIO60_15295 PF00692 dUTPase OIO60_15300 PF00580 UvrD/REP helicase N-terminal domain OIO60_15300 PF13361 UvrD-like helicase C-terminal domain OIO60_15305 PF00691 OmpA family OIO60_15305 PF13488 Glycine zipper OIO60_15310 PF01553 Acyltransferase OIO60_15320 PF03775 Septum formation inhibitor MinC, C-terminal domain OIO60_15325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain OIO60_15330 PF03776 Septum formation topological specificity factor MinE OIO60_15345 PF01810 LysE type translocator OIO60_15350 PF13491 4TM region of DNA translocase FtsK/SpoIIIE OIO60_15350 PF17854 FtsK alpha domain OIO60_15350 PF09397 Ftsk gamma domain OIO60_15350 PF01580 FtsK/SpoIIIE family OIO60_15355 PF07992 Pyridine nucleotide-disulphide oxidoreductase OIO60_15360 PF03588 Leucyl/phenylalanyl-tRNA protein transferase OIO60_15365 PF04377 Arginine-tRNA-protein transferase, C terminus OIO60_15365 PF04376 Arginine-tRNA-protein transferase, N terminus OIO60_15370 PF00583 Acetyltransferase (GNAT) family OIO60_15385 PF03143 Elongation factor Tu C-terminal domain OIO60_15385 PF00009 Elongation factor Tu GTP binding domain OIO60_15385 PF03144 Elongation factor Tu domain 2 OIO60_15390 PF00679 Elongation factor G C-terminus OIO60_15390 PF14492 Elongation Factor G, domain II OIO60_15390 PF03764 Elongation factor G, domain IV OIO60_15390 PF00009 Elongation factor Tu GTP binding domain OIO60_15390 PF03144 Elongation factor Tu domain 2 OIO60_15395 PF00177 Ribosomal protein S7p/S5e OIO60_15400 PF00164 Ribosomal protein S12/S23 OIO60_15410 PF00109 Beta-ketoacyl synthase, N-terminal domain OIO60_15410 PF02801 Beta-ketoacyl synthase, C-terminal domain OIO60_15415 PF03653 Uncharacterised protein family (UPF0093) OIO60_15420 PF02678 Pirin OIO60_15420 PF05726 Pirin C-terminal cupin domain OIO60_15430 PF02540 NAD synthase OIO60_15430 PF00795 Carbon-nitrogen hydrolase OIO60_15445 PF00111 2Fe-2S iron-sulfur cluster binding domain OIO60_15445 PF00175 Oxidoreductase NAD-binding domain OIO60_15445 PF00970 Oxidoreductase FAD-binding domain OIO60_15450 PF00171 Aldehyde dehydrogenase family OIO60_15455 PF00355 Rieske [2Fe-2S] domain OIO60_15455 PF00848 Ring hydroxylating alpha subunit (catalytic domain) OIO60_15460 PF07859 alpha/beta hydrolase fold OIO60_15465 PF02028 BCCT, betaine/carnitine/choline family transporter OIO60_15470 PF00180 Isocitrate/isopropylmalate dehydrogenase OIO60_15475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_15475 PF03466 LysR substrate binding domain OIO60_15495 PF00037 4Fe-4S binding domain OIO60_15500 PF01467 Cytidylyltransferase-like OIO60_15505 PF01668 SmpB protein OIO60_15510 PF03358 NADPH-dependent FMN reductase OIO60_15515 PF02578 Multi-copper polyphenol oxidoreductase laccase OIO60_15520 PF01479 S4 domain OIO60_15520 PF00849 RNA pseudouridylate synthase OIO60_15525 PF13525 Outer membrane lipoprotein OIO60_15530 PF08275 DNA primase catalytic core, N-terminal domain OIO60_15530 PF01807 CHC2 zinc finger OIO60_15530 PF08278 DNA primase DnaG DnaB-binding OIO60_15530 PF10410 DnaB-helicase binding domain of primase OIO60_15535 PF01488 Shikimate / quinate 5-dehydrogenase OIO60_15535 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain OIO60_15535 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain OIO60_15545 PF03550 Outer membrane lipoprotein LolB OIO60_15550 PF08544 GHMP kinases C terminal OIO60_15550 PF00288 GHMP kinases N terminal domain OIO60_15575 PF14572 Phosphoribosyl synthetase-associated domain OIO60_15575 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase OIO60_15580 PF01386 Ribosomal L25p family OIO60_15585 PF01195 Peptidyl-tRNA hydrolase OIO60_15590 PF02261 Aspartate decarboxylase OIO60_15605 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase OIO60_15615 PF02581 Thiamine monophosphate synthase OIO60_15615 PF03070 TENA/THI-4/PQQC family OIO60_15615 PF08543 Phosphomethylpyrimidine kinase OIO60_15620 PF01476 LysM domain OIO60_15620 PF04972 BON domain OIO60_15625 PF00550 Phosphopantetheine attachment site OIO60_15635 PF00698 Acyl transferase domain OIO60_15640 PF01783 Ribosomal L32p protein family OIO60_15645 PF02620 Large ribosomal RNA subunit accumulation protein YceD OIO60_15650 PF04315 Elongation factor P hydroxylase OIO60_15655 PF01300 Telomere recombination OIO60_15660 PF02616 Segregation and condensation protein ScpA OIO60_15665 PF04079 Segregation and condensation complex subunit ScpB OIO60_15670 PF00849 RNA pseudouridylate synthase OIO60_15670 PF01479 S4 domain OIO60_15685 PF00155 Aminotransferase class I and II OIO60_15690 PF00202 Aminotransferase class-III OIO60_15690 PF06968 Biotin and Thiamin Synthesis associated domain OIO60_15690 PF04055 Radical SAM superfamily OIO60_15695 PF12697 Alpha/beta hydrolase family OIO60_15695 PF08241 Methyltransferase domain OIO60_15700 PF02358 Trehalose-phosphatase OIO60_15705 PF00982 Glycosyltransferase family 20 OIO60_15710 PF07690 Major Facilitator Superfamily OIO60_15715 PF00210 Ferritin-like domain OIO60_15720 PF00533 BRCA1 C Terminus (BRCT) domain OIO60_15720 PF01653 NAD-dependent DNA ligase adenylation domain OIO60_15720 PF03120 NAD-dependent DNA ligase OB-fold domain OIO60_15720 PF03119 NAD-dependent DNA ligase C4 zinc finger domain OIO60_15720 PF12826 Helix-hairpin-helix motif OIO60_15730 PF06470 SMC proteins Flexible Hinge Domain OIO60_15730 PF02463 RecF/RecN/SMC N terminal domain OIO60_15740 PF01925 Sulfite exporter TauE/SafE OIO60_15750 PF03309 Type III pantothenate kinase OIO60_15755 PF00448 SRP54-type protein, GTPase domain OIO60_15755 PF02881 SRP54-type protein, helical bundle domain OIO60_15755 PF02978 Signal peptide binding domain OIO60_15765 PF01207 Dihydrouridine synthase (Dus) OIO60_15795 PF00692 dUTPase OIO60_15810 PF01048 Phosphorylase superfamily OIO60_15815 PF10609 NUBPL iron-transfer P-loop NTPase OIO60_15825 PF01588 Putative tRNA binding domain OIO60_15825 PF09334 tRNA synthetases class I (M) OIO60_15850 PF13533 Biotin-lipoyl like OIO60_15855 PF00291 Pyridoxal-phosphate dependent enzyme OIO60_15870 PF05552 Conserved TM helix OIO60_15885 PF00970 Oxidoreductase FAD-binding domain OIO60_15885 PF00175 Oxidoreductase NAD-binding domain OIO60_15890 PF03466 LysR substrate binding domain OIO60_15890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_15895 PF00313 'Cold-shock' DNA-binding domain OIO60_15905 PF00361 Proton-conducting membrane transporter OIO60_15910 PF00361 Proton-conducting membrane transporter OIO60_15915 PF00361 Proton-conducting membrane transporter OIO60_15915 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OIO60_15920 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OIO60_15925 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 OIO60_15930 PF12838 4Fe-4S dicluster domain OIO60_15935 PF00146 NADH dehydrogenase OIO60_15940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain OIO60_15940 PF00384 Molybdopterin oxidoreductase OIO60_15940 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region OIO60_15945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit OIO60_15945 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region OIO60_15945 PF10531 SLBB domain OIO60_15955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit OIO60_15955 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit OIO60_15960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit OIO60_15965 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 OIO60_15970 PF00990 Diguanylate cyclase, GGDEF domain OIO60_15970 PF17151 Periplasmic sensor domain OIO60_15980 PF00672 HAMP domain OIO60_15980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_15980 PF00512 His Kinase A (phospho-acceptor) domain OIO60_15985 PF00072 Response regulator receiver domain OIO60_15985 PF00486 Transcriptional regulatory protein, C terminal OIO60_15995 PF03477 ATP cone domain OIO60_15995 PF02867 Ribonucleotide reductase, barrel domain OIO60_15995 PF00317 Ribonucleotide reductase, all-alpha domain OIO60_16005 PF00268 Ribonucleotide reductase, small chain OIO60_16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_16015 PF00512 His Kinase A (phospho-acceptor) domain OIO60_16015 PF13755 Sensor N-terminal transmembrane domain OIO60_16015 PF13756 Stimulus-sensing domain OIO60_16015 PF00672 HAMP domain OIO60_16085 PF13360 PQQ-like domain OIO60_16085 PF01011 PQQ enzyme repeat OIO60_16110 PF02567 Phenazine biosynthesis-like protein OIO60_16135 PF01613 Flavin reductase like domain OIO60_16140 PF08267 Cobalamin-independent synthase, N-terminal domain OIO60_16140 PF01717 Cobalamin-independent synthase, Catalytic domain OIO60_16150 PF03466 LysR substrate binding domain OIO60_16150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_16155 PF01810 LysE type translocator OIO60_16165 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term OIO60_16165 PF12833 Helix-turn-helix domain OIO60_16170 PF07687 Peptidase dimerisation domain OIO60_16170 PF01546 Peptidase family M20/M25/M40 OIO60_16180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_16180 PF03466 LysR substrate binding domain OIO60_16185 PF07690 Major Facilitator Superfamily OIO60_16195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_16195 PF03466 LysR substrate binding domain OIO60_16200 PF14537 Cytochrome c3 OIO60_16200 PF00890 FAD binding domain OIO60_16210 PF02515 CoA-transferase family III OIO60_16215 PF07690 Major Facilitator Superfamily OIO60_16220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_16220 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_16220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_16225 PF03466 LysR substrate binding domain OIO60_16225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_16230 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_16230 PF00107 Zinc-binding dehydrogenase OIO60_16235 PF00962 Adenosine/AMP deaminase OIO60_16260 PF02445 Quinolinate synthetase A protein OIO60_16265 PF01960 ArgJ family OIO60_16270 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OIO60_16270 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain OIO60_16275 PF00893 Small Multidrug Resistance protein OIO60_16285 PF05275 Copper resistance protein B precursor (CopB) OIO60_16290 PF07731 Multicopper oxidase OIO60_16290 PF07732 Multicopper oxidase OIO60_16290 PF00394 Multicopper oxidase OIO60_16305 PF00834 Ribulose-phosphate 3 epimerase family OIO60_16315 PF00756 Putative esterase OIO60_16325 PF04445 Putative SAM-dependent methyltransferase OIO60_16330 PF00814 Glycoprotease family OIO60_16335 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_16340 PF00293 NUDIX domain OIO60_16380 PF00425 chorismate binding enzyme OIO60_16380 PF04715 Anthranilate synthase component I, N terminal region OIO60_16385 PF00155 Aminotransferase class I and II OIO60_16390 PF00815 Histidinol dehydrogenase OIO60_16395 PF01634 ATP phosphoribosyltransferase OIO60_16400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OIO60_16405 PF01722 BolA-like protein OIO60_16410 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein OIO60_16415 PF00309 Sigma-54 factor, Activator interacting domain (AID) OIO60_16415 PF04552 Sigma-54, DNA binding domain OIO60_16415 PF04963 Sigma-54 factor, core binding domain OIO60_16470 PF01047 MarR family OIO60_16475 PF02566 OsmC-like protein OIO60_16480 PF00437 Type II/IV secretion system protein OIO60_16500 PF01367 5'-3' exonuclease, C-terminal SAM fold OIO60_16500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OIO60_16500 PF00476 DNA polymerase family A OIO60_16500 PF01612 3'-5' exonuclease OIO60_16505 PF02325 YGGT family OIO60_16510 PF14748 Pyrroline-5-carboxylate reductase dimerisation OIO60_16510 PF03807 NADP oxidoreductase coenzyme F420-dependent OIO60_16515 PF09179 TilS substrate binding domain OIO60_16515 PF11734 TilS substrate C-terminal domain OIO60_16515 PF01171 PP-loop family OIO60_16520 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit OIO60_16525 PF02541 Ppx/GppA phosphatase family OIO60_16530 PF00085 Thioredoxin OIO60_16535 PF07498 Rho termination factor, N-terminal domain OIO60_16535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OIO60_16535 PF07497 Rho termination factor, RNA-binding domain OIO60_16550 PF00216 Bacterial DNA-binding protein OIO60_16555 PF03483 B3/4 domain OIO60_16555 PF03484 tRNA synthetase B5 domain OIO60_16555 PF03147 Ferredoxin-fold anticodon binding domain OIO60_16555 PF01588 Putative tRNA binding domain OIO60_16555 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain OIO60_16560 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain OIO60_16560 PF01409 tRNA synthetases class II core domain (F) OIO60_16580 PF00453 Ribosomal protein L20 OIO60_16585 PF01632 Ribosomal protein L35 OIO60_16595 PF07690 Major Facilitator Superfamily OIO60_16600 PF09335 SNARE associated Golgi protein OIO60_16605 PF00043 Glutathione S-transferase, C-terminal domain OIO60_16605 PF02798 Glutathione S-transferase, N-terminal domain OIO60_16610 PF00707 Translation initiation factor IF-3, C-terminal domain OIO60_16610 PF05198 Translation initiation factor IF-3, N-terminal domain OIO60_16615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OIO60_16615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OIO60_16615 PF03129 Anticodon binding domain OIO60_16615 PF02824 TGS domain OIO60_16620 PF00501 AMP-binding enzyme OIO60_16620 PF13193 AMP-binding enzyme C-terminal domain OIO60_16625 PF04751 Protein of unknown function (DUF615) OIO60_16630 PF00381 PTS HPr component phosphorylation site OIO60_16635 PF03668 P-loop ATPase protein family OIO60_16640 PF02569 Pantoate-beta-alanine ligase OIO60_16645 PF02548 Ketopantoate hydroxymethyltransferase OIO60_16650 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) OIO60_16655 PF01743 Poly A polymerase head domain OIO60_16655 PF12626 Polymerase A arginine-rich C-terminus OIO60_16655 PF12627 Probable RNA and SrmB- binding site of polymerase A OIO60_16665 PF03819 MazG nucleotide pyrophosphohydrolase domain OIO60_16675 PF02824 TGS domain OIO60_16675 PF13291 ACT domain OIO60_16675 PF04607 Region found in RelA / SpoT proteins OIO60_16680 PF05958 tRNA (Uracil-5-)-methyltransferase OIO60_16690 PF00291 Pyridoxal-phosphate dependent enzyme OIO60_16695 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OIO60_16695 PF00672 HAMP domain OIO60_16695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_16695 PF00512 His Kinase A (phospho-acceptor) domain OIO60_16695 PF01627 Hpt domain OIO60_16695 PF00072 Response regulator receiver domain OIO60_16700 PF00378 Enoyl-CoA hydratase/isomerase OIO60_16705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OIO60_16705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OIO60_16710 PF01261 Xylose isomerase-like TIM barrel OIO60_16720 PF00106 short chain dehydrogenase OIO60_16725 PF02233 NAD(P) transhydrogenase beta subunit OIO60_16730 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch OIO60_16735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain OIO60_16735 PF05222 Alanine dehydrogenase/PNT, N-terminal domain OIO60_16740 PF00892 EamA-like transporter family OIO60_16750 PF07690 Major Facilitator Superfamily OIO60_16755 PF01207 Dihydrouridine synthase (Dus) OIO60_16765 PF03466 LysR substrate binding domain OIO60_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_16775 PF00899 ThiF family OIO60_16785 PF00694 Aconitase C-terminal domain OIO60_16785 PF00330 Aconitase family (aconitate hydratase) OIO60_16790 PF01026 TatD related DNase OIO60_16805 PF00009 Elongation factor Tu GTP binding domain OIO60_16805 PF03144 Elongation factor Tu domain 2 OIO60_16805 PF16658 Class II release factor RF3, C-terminal domain OIO60_16825 PF00563 EAL domain OIO60_16825 PF03707 Bacterial signalling protein N terminal repeat OIO60_16825 PF00990 Diguanylate cyclase, GGDEF domain OIO60_16830 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain OIO60_16830 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain OIO60_16835 PF10369 Small subunit of acetolactate synthase OIO60_16840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OIO60_16840 PF00205 Thiamine pyrophosphate enzyme, central domain OIO60_16840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OIO60_16850 PF09334 tRNA synthetases class I (M) OIO60_16850 PF13603 Leucyl-tRNA synthetase, Domain 2 OIO60_16850 PF08264 Anticodon-binding domain of tRNA OIO60_16850 PF00133 tRNA synthetases class I (I, L, M and V) OIO60_16865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OIO60_16870 PF00005 ABC transporter OIO60_16870 PF02687 FtsX-like permease family OIO60_16870 PF12704 MacB-like periplasmic core domain OIO60_16875 PF02321 Outer membrane efflux protein OIO60_16890 PF00929 Exonuclease OIO60_16895 PF03193 RsgA GTPase OIO60_16905 PF00462 Glutaredoxin OIO60_16910 PF02556 Preprotein translocase subunit SecB OIO60_16925 PF00109 Beta-ketoacyl synthase, N-terminal domain OIO60_16925 PF02801 Beta-ketoacyl synthase, C-terminal domain OIO60_16940 PF02801 Beta-ketoacyl synthase, C-terminal domain OIO60_16940 PF00109 Beta-ketoacyl synthase, N-terminal domain OIO60_16950 PF04820 Tryptophan halogenase OIO60_16970 PF00221 Aromatic amino acid lyase OIO60_16985 PF00501 AMP-binding enzyme OIO60_16985 PF13193 AMP-binding enzyme C-terminal domain OIO60_16995 PF00550 Phosphopantetheine attachment site OIO60_17000 PF00550 Phosphopantetheine attachment site OIO60_17015 PF01926 50S ribosome-binding GTPase OIO60_17015 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal OIO60_17020 PF13360 PQQ-like domain OIO60_17030 PF13393 Histidyl-tRNA synthetase OIO60_17030 PF03129 Anticodon binding domain OIO60_17035 PF04551 GcpE protein OIO60_17040 PF13464 Domain of unknown function (DUF4115) OIO60_17050 PF04055 Radical SAM superfamily OIO60_17055 PF00334 Nucleoside diphosphate kinase OIO60_17060 PF04384 Iron-sulphur cluster assembly OIO60_17065 PF01569 PAP2 superfamily OIO60_17070 PF13439 Glycosyltransferase Family 4 OIO60_17070 PF00534 Glycosyl transferases group 1 OIO60_17075 PF17804 Tail specific protease N-terminal domain OIO60_17075 PF11818 C-terminal domain of tail specific protease (DUF3340) OIO60_17075 PF00595 PDZ domain OIO60_17075 PF03572 Peptidase family S41 OIO60_17080 PF00933 Glycosyl hydrolase family 3 N terminal domain OIO60_17090 PF00561 alpha/beta hydrolase fold OIO60_17095 PF00171 Aldehyde dehydrogenase family OIO60_17105 PF01202 Shikimate kinase OIO60_17110 PF02447 GntP family permease OIO60_17115 PF01081 KDPG and KHG aldolase OIO60_17120 PF00920 Dehydratase family OIO60_17125 PF00871 Acetokinase family OIO60_17130 PF01515 Phosphate acetyl/butaryl transferase OIO60_17130 PF07085 DRTGG domain OIO60_17135 PF05683 Fumarase C-terminus OIO60_17135 PF05681 Fumarate hydratase (Fumerase) OIO60_17150 PF06689 ClpX C4-type zinc finger OIO60_17150 PF07724 AAA domain (Cdc48 subfamily) OIO60_17150 PF10431 C-terminal, D2-small domain, of ClpB protein OIO60_17155 PF00574 Clp protease OIO60_17160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO60_17160 PF05698 Bacterial trigger factor protein (TF) C-terminus OIO60_17160 PF05697 Bacterial trigger factor protein (TF) OIO60_17165 PF07715 TonB-dependent Receptor Plug Domain OIO60_17165 PF00593 TonB dependent receptor OIO60_17170 PF13640 2OG-Fe(II) oxygenase superfamily OIO60_17170 PF18331 PKHD-type hydroxylase C-terminal domain OIO60_17175 PF00682 HMGL-like OIO60_17175 PF08502 LeuA allosteric (dimerisation) domain OIO60_17180 PF00561 alpha/beta hydrolase fold OIO60_17185 PF00561 alpha/beta hydrolase fold OIO60_17185 PF07021 Methionine biosynthesis protein MetW OIO60_17195 PF01725 Ham1 family OIO60_17205 PF02416 mttA/Hcf106 family OIO60_17210 PF02416 mttA/Hcf106 family OIO60_17215 PF00902 Sec-independent protein translocase protein (TatC) OIO60_17235 PF01790 Prolipoprotein diacylglyceryl transferase OIO60_17250 PF00303 Thymidylate synthase OIO60_17255 PF00186 Dihydrofolate reductase OIO60_17265 PF01625 Peptide methionine sulfoxide reductase OIO60_17275 PF01618 MotA/TolQ/ExbB proton channel family OIO60_17285 PF00551 Formyl transferase OIO60_17285 PF01842 ACT domain OIO60_17295 PF00171 Aldehyde dehydrogenase family OIO60_17300 PF00830 Ribosomal L28 family OIO60_17305 PF00471 Ribosomal protein L33 OIO60_17310 PF00999 Sodium/hydrogen exchanger family OIO60_17310 PF02254 TrkA-N domain OIO60_17330 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) OIO60_17335 PF13361 UvrD-like helicase C-terminal domain OIO60_17335 PF00580 UvrD/REP helicase N-terminal domain OIO60_17350 PF08272 Topoisomerase I zinc-ribbon-like OIO60_17350 PF01131 DNA topoisomerase OIO60_17350 PF01751 Toprim domain OIO60_17350 PF01396 Topoisomerase DNA binding C4 zinc finger OIO60_17360 PF01638 HxlR-like helix-turn-helix OIO60_17365 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_17365 PF00107 Zinc-binding dehydrogenase OIO60_17370 PF04102 SlyX OIO60_17375 PF16326 ABC transporter C-terminal domain OIO60_17375 PF12848 ABC transporter OIO60_17375 PF00005 ABC transporter OIO60_17380 PF01810 LysE type translocator OIO60_17385 PF03279 Bacterial lipid A biosynthesis acyltransferase OIO60_17395 PF00375 Sodium:dicarboxylate symporter family OIO60_17405 PF01118 Semialdehyde dehydrogenase, NAD binding domain OIO60_17405 PF02774 Semialdehyde dehydrogenase, dimerisation domain OIO60_17425 PF01416 tRNA pseudouridine synthase OIO60_17435 PF01176 Translation initiation factor 1A / IF-1 OIO60_17450 PF00180 Isocitrate/isopropylmalate dehydrogenase OIO60_17460 PF00694 Aconitase C-terminal domain OIO60_17465 PF00330 Aconitase family (aconitate hydratase) OIO60_17475 PF03466 LysR substrate binding domain OIO60_17475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_17495 PF00293 NUDIX domain OIO60_17500 PF01590 GAF domain OIO60_17500 PF05524 PEP-utilising enzyme, N-terminal OIO60_17500 PF00391 PEP-utilising enzyme, mobile domain OIO60_17500 PF02896 PEP-utilising enzyme, TIM barrel domain OIO60_17505 PF00141 Peroxidase OIO60_17510 PF12706 Beta-lactamase superfamily domain OIO60_17515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_17515 PF03466 LysR substrate binding domain OIO60_17525 PF02798 Glutathione S-transferase, N-terminal domain OIO60_17530 PF08279 HTH domain OIO60_17530 PF13280 WYL domain OIO60_17535 PF13419 Haloacid dehalogenase-like hydrolase OIO60_17540 PF00849 RNA pseudouridylate synthase OIO60_17540 PF01479 S4 domain OIO60_17545 PF12111 Polyribonucleotide phosphorylase C terminal OIO60_17545 PF10150 Ribonuclease E/G family OIO60_17545 PF00575 S1 RNA binding domain OIO60_17550 PF00501 AMP-binding enzyme OIO60_17550 PF13193 AMP-binding enzyme C-terminal domain OIO60_17565 PF03466 LysR substrate binding domain OIO60_17565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_17570 PF00106 short chain dehydrogenase OIO60_17575 PF06969 HemN C-terminal domain OIO60_17575 PF04055 Radical SAM superfamily OIO60_17585 PF01554 MatE OIO60_17590 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OIO60_17590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_17590 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_17595 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OIO60_17595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_17600 PF03109 ABC1 family OIO60_17605 PF01197 Ribosomal protein L31 OIO60_17620 PF02537 CrcB-like protein, Camphor Resistance (CrcB) OIO60_17640 PF03884 DNA gyrase inhibitor YacG OIO60_17645 PF00753 Metallo-beta-lactamase superfamily OIO60_17650 PF00762 Ferrochelatase OIO60_17660 PF01177 Asp/Glu/Hydantoin racemase OIO60_17675 PF01206 Sulfurtransferase TusA OIO60_17680 PF00571 CBS domain OIO60_17680 PF03471 Transporter associated domain OIO60_17685 PF00795 Carbon-nitrogen hydrolase OIO60_17690 PF01588 Putative tRNA binding domain OIO60_17700 PF08334 Type II secretion system (T2SS), protein G OIO60_17700 PF07963 Prokaryotic N-terminal methylation motif OIO60_17705 PF00482 Type II secretion system (T2SS), protein F OIO60_17710 PF18074 Primosomal protein N C-terminal domain OIO60_17710 PF00270 DEAD/DEAH box helicase OIO60_17710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain OIO60_17710 PF00271 Helicase conserved C-terminal domain OIO60_17710 PF17764 3′ DNA-binding domain (3′BD) OIO60_17715 PF00999 Sodium/hydrogen exchanger family OIO60_17715 PF02254 TrkA-N domain OIO60_17720 PF01430 Hsp33 protein OIO60_17730 PF00226 DnaJ domain OIO60_17730 PF01556 DnaJ C terminal domain OIO60_17740 PF01544 CorA-like Mg2+ transporter protein OIO60_17745 PF00013 KH domain OIO60_17745 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain OIO60_17745 PF01138 3' exoribonuclease family, domain 1 OIO60_17745 PF03725 3' exoribonuclease family, domain 2 OIO60_17745 PF00575 S1 RNA binding domain OIO60_17750 PF00312 Ribosomal protein S15 OIO60_17755 PF00144 Beta-lactamase OIO60_17760 PF13538 UvrD-like helicase C-terminal domain OIO60_17765 PF12705 PD-(D/E)XK nuclease superfamily OIO60_17765 PF13361 UvrD-like helicase C-terminal domain OIO60_17765 PF00580 UvrD/REP helicase N-terminal domain OIO60_17770 PF17946 RecC C-terminal domain OIO60_17780 PF03976 Polyphosphate kinase 2 (PPK2) OIO60_17790 PF01209 ubiE/COQ5 methyltransferase family OIO60_17800 PF03109 ABC1 family OIO60_17805 PF01494 FAD binding domain OIO60_17810 PF01502 Phosphoribosyl-AMP cyclohydrolase OIO60_17825 PF13244 Domain of unknown function (DUF4040) OIO60_17825 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter OIO60_17825 PF00361 Proton-conducting membrane transporter OIO60_17825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OIO60_17830 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OIO60_17835 PF00361 Proton-conducting membrane transporter OIO60_17840 PF01899 Na+/H+ ion antiporter subunit OIO60_17845 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) OIO60_17850 PF03334 Na+/H+ antiporter subunit OIO60_17855 PF02033 Ribosome-binding factor A OIO60_17860 PF11987 Translation-initiation factor 2 OIO60_17860 PF00009 Elongation factor Tu GTP binding domain OIO60_17860 PF08364 Bacterial translation initiation factor IF-2 associated region OIO60_17860 PF04760 Translation initiation factor IF-2, N-terminal region OIO60_17865 PF13184 NusA-like KH domain OIO60_17865 PF08529 NusA N-terminal domain OIO60_17865 PF00575 S1 RNA binding domain OIO60_17870 PF02576 RimP N-terminal domain OIO60_17870 PF17384 RimP C-terminal SH3 domain OIO60_17890 PF03840 Preprotein translocase SecG subunit OIO60_17895 PF00121 Triosephosphate isomerase OIO60_17900 PF00437 Type II/IV secretion system protein OIO60_17900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OIO60_17905 PF00482 Type II secretion system (T2SS), protein F OIO60_17910 PF06750 Bacterial Peptidase A24 N-terminal domain OIO60_17910 PF01478 Type IV leader peptidase family OIO60_17915 PF01121 Dephospho-CoA kinase OIO60_17925 PF00588 SpoU rRNA Methylase family OIO60_17925 PF08032 RNA 2'-O ribose methyltransferase substrate binding OIO60_17930 PF06865 Pyrimidine/purine nucleoside phosphorylase OIO60_17940 PF02463 RecF/RecN/SMC N terminal domain OIO60_17945 PF02622 Uncharacterized ACR, COG1678 OIO60_17950 PF03652 Holliday junction resolvase OIO60_17955 PF13533 Biotin-lipoyl like OIO60_17980 PF02805 Metal binding domain of Ada OIO60_17980 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OIO60_17980 PF12833 Helix-turn-helix domain OIO60_17980 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain OIO60_17985 PF01066 CDP-alcohol phosphatidyltransferase OIO60_17995 PF01541 GIY-YIG catalytic domain OIO60_17995 PF02151 UvrB/uvrC motif OIO60_17995 PF08459 UvrC Helix-hairpin-helix N-terminal OIO60_18015 PF00378 Enoyl-CoA hydratase/isomerase OIO60_18015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OIO60_18015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OIO60_18020 PF02803 Thiolase, C-terminal domain OIO60_18020 PF00108 Thiolase, N-terminal domain OIO60_18040 PF00376 MerR family regulatory protein OIO60_18040 PF09278 MerR, DNA binding OIO60_18050 PF01323 DSBA-like thioredoxin domain OIO60_18065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_18065 PF00183 Hsp90 protein OIO60_18080 PF13726 Na+-H+ antiporter family OIO60_18080 PF03553 Na+/H+ antiporter family OIO60_18085 PF00561 alpha/beta hydrolase fold OIO60_18105 PF04997 RNA polymerase Rpb1, domain 1 OIO60_18105 PF00623 RNA polymerase Rpb1, domain 2 OIO60_18105 PF04983 RNA polymerase Rpb1, domain 3 OIO60_18105 PF05000 RNA polymerase Rpb1, domain 4 OIO60_18105 PF04998 RNA polymerase Rpb1, domain 5 OIO60_18110 PF04560 RNA polymerase Rpb2, domain 7 OIO60_18110 PF00562 RNA polymerase Rpb2, domain 6 OIO60_18110 PF10385 RNA polymerase beta subunit external 1 domain OIO60_18110 PF04561 RNA polymerase Rpb2, domain 2 OIO60_18110 PF04563 RNA polymerase beta subunit OIO60_18110 PF04565 RNA polymerase Rpb2, domain 3 OIO60_18115 PF00542 Ribosomal protein L7/L12 C-terminal domain OIO60_18115 PF16320 Ribosomal protein L7/L12 dimerisation domain OIO60_18120 PF00466 Ribosomal protein L10 OIO60_18125 PF00687 Ribosomal protein L1p/L10e family OIO60_18130 PF00298 Ribosomal protein L11, RNA binding domain OIO60_18130 PF03946 Ribosomal protein L11, N-terminal domain OIO60_18135 PF00467 KOW motif OIO60_18135 PF02357 Transcription termination factor nusG OIO60_18140 PF00584 SecE/Sec61-gamma subunits of protein translocation complex OIO60_18150 PF03143 Elongation factor Tu C-terminal domain OIO60_18150 PF00009 Elongation factor Tu GTP binding domain OIO60_18150 PF03144 Elongation factor Tu domain 2 OIO60_18175 PF00425 chorismate binding enzyme OIO60_18175 PF04715 Anthranilate synthase component I, N terminal region OIO60_18180 PF13419 Haloacid dehalogenase-like hydrolase OIO60_18185 PF12401 Protein of unknown function (DUF2662) OIO60_18185 PF00498 FHA domain OIO60_18190 PF00263 Bacterial type II and III secretion system protein OIO60_18190 PF03958 Bacterial type II/III secretion system short domain OIO60_18205 PF00816 H-NS histone family OIO60_18230 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain OIO60_18230 PF03900 Porphobilinogen deaminase, C-terminal domain OIO60_18235 PF04397 LytTr DNA-binding domain OIO60_18235 PF00072 Response regulator receiver domain OIO60_18240 PF07694 5TMR of 5TMR-LYT OIO60_18240 PF06580 Histidine kinase OIO60_18240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_18245 PF00206 Lyase OIO60_18245 PF14698 Argininosuccinate lyase C-terminal OIO60_18250 PF04362 Bacterial Fe(2+) trafficking OIO60_18255 PF01895 PhoU domain OIO60_18260 PF02321 Outer membrane efflux protein OIO60_18265 PF00892 EamA-like transporter family OIO60_18280 PF01964 Radical SAM ThiC family OIO60_18280 PF13667 ThiC-associated domain OIO60_18285 PF00293 NUDIX domain OIO60_18290 PF00149 Calcineurin-like phosphoesterase OIO60_18295 PF01258 Prokaryotic dksA/traR C4-type zinc finger OIO60_18300 PF00749 tRNA synthetases class I (E and Q), catalytic domain OIO60_18305 PF01098 Cell cycle protein OIO60_18310 PF02875 Mur ligase family, glutamate ligase domain OIO60_18310 PF08245 Mur ligase middle domain OIO60_18320 PF07664 Ferrous iron transport protein B C terminus OIO60_18320 PF02421 Ferrous iron transport protein B OIO60_18320 PF07670 Nucleoside recognition OIO60_18330 PF02899 Phage integrase, N-terminal SAM-like domain OIO60_18330 PF00589 Phage integrase family OIO60_18335 PF13098 Thioredoxin-like domain OIO60_18335 PF10411 Disulfide bond isomerase protein N-terminus OIO60_18340 PF00742 Homoserine dehydrogenase OIO60_18340 PF01842 ACT domain OIO60_18340 PF03447 Homoserine dehydrogenase, NAD binding domain OIO60_18345 PF00291 Pyridoxal-phosphate dependent enzyme OIO60_18350 PF00768 D-alanyl-D-alanine carboxypeptidase OIO60_18355 PF00072 Response regulator receiver domain OIO60_18355 PF00196 Bacterial regulatory proteins, luxR family OIO60_18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OIO60_18360 PF00512 His Kinase A (phospho-acceptor) domain OIO60_18365 PF02954 Bacterial regulatory protein, Fis family OIO60_18365 PF00072 Response regulator receiver domain OIO60_18365 PF00158 Sigma-54 interaction domain OIO60_18370 PF03572 Peptidase family S41 OIO60_18370 PF00595 PDZ domain OIO60_18375 PF06415 BPG-independent PGAM N-terminus (iPGM_N) OIO60_18375 PF01676 Metalloenzyme superfamily OIO60_18380 PF03739 Lipopolysaccharide export system permease LptF/LptG OIO60_18390 PF00883 Cytosol aminopeptidase family, catalytic domain OIO60_18390 PF02789 Cytosol aminopeptidase family, N-terminal domain OIO60_18410 PF00677 Lumazine binding domain OIO60_18420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region OIO60_18420 PF01872 RibD C-terminal domain OIO60_18425 PF03477 ATP cone domain OIO60_18430 PF00909 Ammonium Transporter Family OIO60_18435 PF00543 Nitrogen regulatory protein P-II OIO60_18455 PF01636 Phosphotransferase enzyme family OIO60_18460 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase OIO60_18480 PF02909 Tetracyclin repressor-like, C-terminal domain OIO60_18480 PF00440 Bacterial regulatory proteins, tetR family OIO60_18485 PF07690 Major Facilitator Superfamily OIO60_18495 PF01740 STAS domain OIO60_18495 PF00916 Sulfate permease family OIO60_18500 PF00582 Universal stress protein family OIO60_18520 PF00665 Integrase core domain OIO60_18535 PF00155 Aminotransferase class I and II OIO60_18535 PF00392 Bacterial regulatory proteins, gntR family OIO60_18545 PF00701 Dihydrodipicolinate synthetase family OIO60_18560 PF03573 outer membrane porin, OprD family OIO60_18565 PF00719 Inorganic pyrophosphatase OIO60_18580 PF00501 AMP-binding enzyme OIO60_18580 PF13193 AMP-binding enzyme C-terminal domain OIO60_18585 PF00521 DNA gyrase/topoisomerase IV, subunit A OIO60_18585 PF03989 DNA gyrase C-terminal domain, beta-propeller OIO60_18590 PF07690 Major Facilitator Superfamily OIO60_18595 PF03458 UPF0126 domain OIO60_18600 PF02810 SEC-C motif OIO60_18605 PF03471 Transporter associated domain OIO60_18605 PF03741 Integral membrane protein TerC family OIO60_18610 PF03641 Possible lysine decarboxylase OIO60_18615 PF07690 Major Facilitator Superfamily OIO60_18625 PF00817 impB/mucB/samB family OIO60_18625 PF11799 impB/mucB/samB family C-terminal domain OIO60_18625 PF11798 IMS family HHH motif OIO60_18645 PF11842 Domain of unknown function (DUF3362) OIO60_18645 PF04055 Radical SAM superfamily OIO60_18645 PF08497 Radical SAM N-terminal OIO60_18665 PF03358 NADPH-dependent FMN reductase OIO60_18675 PF00291 Pyridoxal-phosphate dependent enzyme OIO60_18735 PF01327 Polypeptide deformylase OIO60_18745 PF02481 DNA recombination-mediator protein A OIO60_18745 PF17782 DprA winged helix domain OIO60_18750 PF01300 Telomere recombination OIO60_18755 PF00892 EamA-like transporter family OIO60_18760 PF00440 Bacterial regulatory proteins, tetR family OIO60_18765 PF07690 Major Facilitator Superfamily OIO60_18775 PF00255 Glutathione peroxidase OIO60_18785 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain OIO60_18790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OIO60_18790 PF02874 ATP synthase alpha/beta family, beta-barrel domain OIO60_18795 PF00231 ATP synthase OIO60_18800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OIO60_18800 PF00306 ATP synthase alpha/beta chain, C terminal domain OIO60_18800 PF02874 ATP synthase alpha/beta family, beta-barrel domain OIO60_18805 PF00213 ATP synthase delta (OSCP) subunit OIO60_18810 PF00430 ATP synthase B/B' CF(0) OIO60_18815 PF00137 ATP synthase subunit C OIO60_18820 PF00119 ATP synthase A chain OIO60_18840 PF00005 ABC transporter OIO60_18845 PF00950 ABC 3 transport family OIO60_18850 PF01810 LysE type translocator OIO60_18855 PF04261 Dyp-type peroxidase family OIO60_18865 PF03949 Malic enzyme, NAD binding domain OIO60_18865 PF00390 Malic enzyme, N-terminal domain OIO60_18870 PF03485 Arginyl tRNA synthetase N terminal domain OIO60_18870 PF05746 DALR anticodon binding domain OIO60_18870 PF00750 tRNA synthetases class I (R) OIO60_18890 PF02678 Pirin OIO60_18890 PF05726 Pirin C-terminal cupin domain OIO60_18900 PF03551 Transcriptional regulator PadR-like family OIO60_18905 PF13427 Domain of unknown function (DUF4111) OIO60_18905 PF01909 Nucleotidyltransferase domain OIO60_18910 PF00117 Glutamine amidotransferase class-I OIO60_18910 PF00958 GMP synthase C terminal domain OIO60_18910 PF02540 NAD synthase OIO60_18915 PF04286 Protein of unknown function (DUF445) OIO60_18920 PF07681 DoxX OIO60_18925 PF09335 SNARE associated Golgi protein OIO60_18940 PF13614 AAA domain OIO60_18950 PF01722 BolA-like protein OIO60_18965 PF01648 4'-phosphopantetheinyl transferase superfamily OIO60_18970 PF12697 Alpha/beta hydrolase family OIO60_18990 PF02801 Beta-ketoacyl synthase, C-terminal domain OIO60_18990 PF00975 Thioesterase domain OIO60_18990 PF14765 Polyketide synthase dehydratase OIO60_18990 PF00550 Phosphopantetheine attachment site OIO60_18990 PF16197 Ketoacyl-synthetase C-terminal extension OIO60_18990 PF08242 Methyltransferase domain OIO60_18990 PF00109 Beta-ketoacyl synthase, N-terminal domain OIO60_18995 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_18995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_18995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_19000 PF00501 AMP-binding enzyme OIO60_19005 PF03472 Autoinducer binding domain OIO60_19005 PF00196 Bacterial regulatory proteins, luxR family OIO60_19015 PF00765 Autoinducer synthase OIO60_19020 PF07690 Major Facilitator Superfamily OIO60_19020 PF00083 Sugar (and other) transporter OIO60_19025 PF00378 Enoyl-CoA hydratase/isomerase OIO60_19030 PF00378 Enoyl-CoA hydratase/isomerase OIO60_19035 PF02770 Acyl-CoA dehydrogenase, middle domain OIO60_19035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OIO60_19035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OIO60_19040 PF00501 AMP-binding enzyme OIO60_19040 PF13193 AMP-binding enzyme C-terminal domain OIO60_19045 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OIO60_19045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OIO60_19050 PF00171 Aldehyde dehydrogenase family OIO60_19060 PF00324 Amino acid permease OIO60_19065 PF00324 Amino acid permease OIO60_19070 PF01042 Endoribonuclease L-PSP OIO60_19075 PF00842 Alanine racemase, C-terminal domain OIO60_19075 PF01168 Alanine racemase, N-terminal domain OIO60_19080 PF01266 FAD dependent oxidoreductase OIO60_19085 PF01037 Lrp/AsnC ligand binding domain OIO60_19095 PF07715 TonB-dependent Receptor Plug Domain OIO60_19095 PF00593 TonB dependent receptor OIO60_19110 PF00849 RNA pseudouridylate synthase OIO60_19125 PF00440 Bacterial regulatory proteins, tetR family OIO60_19125 PF08361 MAATS-type transcriptional repressor, C-terminal region OIO60_19135 PF00109 Beta-ketoacyl synthase, N-terminal domain OIO60_19135 PF02801 Beta-ketoacyl synthase, C-terminal domain OIO60_19170 PF00694 Aconitase C-terminal domain OIO60_19170 PF00330 Aconitase family (aconitate hydratase) OIO60_19175 PF00285 Citrate synthase, C-terminal domain OIO60_19185 PF00392 Bacterial regulatory proteins, gntR family OIO60_19185 PF07729 FCD domain OIO60_19195 PF00155 Aminotransferase class I and II OIO60_19200 PF09330 D-lactate dehydrogenase, membrane binding OIO60_19200 PF01565 FAD binding domain OIO60_19205 PF01070 FMN-dependent dehydrogenase OIO60_19210 PF00392 Bacterial regulatory proteins, gntR family OIO60_19210 PF07729 FCD domain OIO60_19215 PF02652 L-lactate permease OIO60_19220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OIO60_19220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OIO60_19220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OIO60_19220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OIO60_19225 PF16363 GDP-mannose 4,6 dehydratase OIO60_19230 PF00342 Phosphoglucose isomerase OIO60_19235 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OIO60_19235 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OIO60_19235 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OIO60_19240 PF00483 Nucleotidyl transferase OIO60_19245 PF02719 Polysaccharide biosynthesis protein OIO60_19250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family OIO60_19255 PF14602 Hexapeptide repeat of succinyl-transferase OIO60_19255 PF00132 Bacterial transferase hexapeptide (six repeats) OIO60_19255 PF17836 PglD N-terminal domain OIO60_19260 PF02397 Bacterial sugar transferase OIO60_19265 PF00534 Glycosyl transferases group 1 OIO60_19265 PF13439 Glycosyltransferase Family 4 OIO60_19270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OIO60_19270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OIO60_19270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OIO60_19285 PF00535 Glycosyl transferase family 2 OIO60_19290 PF04230 Polysaccharide pyruvyl transferase OIO60_19300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OIO60_19300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OIO60_19300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OIO60_19305 PF18412 Outer-membrane lipoprotein Wza C-terminal domain OIO60_19305 PF10531 SLBB domain OIO60_19305 PF02563 Polysaccharide biosynthesis/export protein OIO60_19310 PF01451 Low molecular weight phosphotyrosine protein phosphatase OIO60_19315 PF13614 AAA domain OIO60_19315 PF02706 Chain length determinant protein OIO60_19315 PF13807 G-rich domain on putative tyrosine kinase OIO60_19320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO60_19320 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OIO60_19325 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OIO60_19325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO60_19330 PF03023 Lipid II flippase MurJ OIO60_19335 PF01510 N-acetylmuramoyl-L-alanine amidase OIO60_19340 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain OIO60_19340 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain OIO60_19350 PF04185 Phosphoesterase family OIO60_19350 PF05506 Domain of unknown function (DUF756) OIO60_19360 PF01138 3' exoribonuclease family, domain 1 OIO60_19360 PF03725 3' exoribonuclease family, domain 2 OIO60_19365 PF00487 Fatty acid desaturase OIO60_19370 PF00175 Oxidoreductase NAD-binding domain OIO60_19375 PF00440 Bacterial regulatory proteins, tetR family OIO60_19380 PF08360 QacR-like protein, C-terminal region OIO60_19380 PF00440 Bacterial regulatory proteins, tetR family OIO60_19385 PF01323 DSBA-like thioredoxin domain OIO60_19395 PF13419 Haloacid dehalogenase-like hydrolase OIO60_19400 PF00106 short chain dehydrogenase OIO60_19415 PF00583 Acetyltransferase (GNAT) family OIO60_19415 PF00696 Amino acid kinase family OIO60_19420 PF09084 NMT1/THI5 like OIO60_19425 PF09084 NMT1/THI5 like OIO60_19430 PF00296 Luciferase-like monooxygenase OIO60_19435 PF00528 Binding-protein-dependent transport system inner membrane component OIO60_19440 PF00005 ABC transporter OIO60_19445 PF08362 YcdC-like protein, C-terminal region OIO60_19445 PF00440 Bacterial regulatory proteins, tetR family OIO60_19450 PF01048 Phosphorylase superfamily OIO60_19460 PF06574 FAD synthetase OIO60_19460 PF01687 Riboflavin kinase OIO60_19465 PF08264 Anticodon-binding domain of tRNA OIO60_19465 PF00133 tRNA synthetases class I (I, L, M and V) OIO60_19465 PF06827 Zinc finger found in FPG and IleRS OIO60_19470 PF01252 Signal peptidase (SPase) II OIO60_19475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OIO60_19515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OIO60_19520 PF07859 alpha/beta hydrolase fold OIO60_19540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OIO60_19540 PF03466 LysR substrate binding domain OIO60_19545 PF01025 GrpE OIO60_19550 PF00012 Hsp70 protein OIO60_19570 PF13406 Transglycosylase SLT domain OIO60_19575 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain OIO60_19575 PF02222 ATP-grasp domain OIO60_19580 PF00731 AIR carboxylase OIO60_19590 PF08245 Mur ligase middle domain OIO60_19590 PF02875 Mur ligase family, glutamate ligase domain OIO60_19590 PF01225 Mur ligase family, catalytic domain OIO60_19600 PF01569 PAP2 superfamily OIO60_19605 PF03741 Integral membrane protein TerC family OIO60_19615 PF03738 Glutathionylspermidine synthase preATP-grasp OIO60_19620 PF00355 Rieske [2Fe-2S] domain OIO60_19625 PF01979 Amidohydrolase family OIO60_19630 PF00156 Phosphoribosyl transferase domain OIO60_19640 PF13098 Thioredoxin-like domain OIO60_19640 PF10411 Disulfide bond isomerase protein N-terminus OIO60_19645 PF01545 Cation efflux family OIO60_19645 PF16916 Dimerisation domain of Zinc Transporter OIO60_19650 PF02583 Metal-sensitive transcriptional repressor OIO60_19655 PF01926 50S ribosome-binding GTPase OIO60_19655 PF12631 MnmE helical domain OIO60_19655 PF10396 GTP-binding protein TrmE N-terminus OIO60_19660 PF02096 60Kd inner membrane protein OIO60_19660 PF14849 YidC periplasmic domain OIO60_19665 PF01809 Putative membrane protein insertion efficiency factor OIO60_19670 PF00825 Ribonuclease P OIO60_19675 PF00468 Ribosomal protein L34 OIO60_19730 PF00565 Staphylococcal nuclease homologue OIO60_19735 PF00816 H-NS histone family OIO60_19785 PF13614 AAA domain OIO60_19790 PF17762 HTH domain found in ParB protein OIO60_19790 PF02195 ParB-like nuclease domain OIO60_19805 PF05816 Toxic anion resistance protein (TelA) OIO60_19890 PF00226 DnaJ domain OIO60_19890 PF01556 DnaJ C terminal domain OIO60_19890 PF00684 DnaJ central domain OIO60_19925 PF18340 DNA relaxase TraI 2B/2B-like domain OIO60_19925 PF08751 TrwC relaxase OIO60_19925 PF18272 single-stranded DNA binding TraI N-terminal subdomain OIO60_19925 PF07057 DNA helicase TraI OIO60_19960 PF00239 Resolvase, N terminal domain OIO60_19960 PF02796 Helix-turn-helix domain of resolvase OIO60_19975 PF01464 Transglycosylase SLT domain OIO60_20010 PF10411 Disulfide bond isomerase protein N-terminus OIO60_20010 PF13098 Thioredoxin-like domain OIO60_20045 PF06834 TraU protein OIO60_20055 PF06986 Type-1V conjugative transfer system mating pair stabilisation OIO60_20070 PF06122 Conjugative relaxosome accessory transposon protein OIO60_20090 PF13438 Domain of unknown function (DUF4113) OIO60_20090 PF00817 impB/mucB/samB family OIO60_20090 PF11799 impB/mucB/samB family C-terminal domain OIO60_20110 PF01051 Initiator Replication protein OIO60_20125 PF02583 Metal-sensitive transcriptional repressor OIO60_20130 PF00107 Zinc-binding dehydrogenase OIO60_20130 PF08240 Alcohol dehydrogenase GroES-like domain OIO60_20140 PF00756 Putative esterase OIO60_20155 PF07715 TonB-dependent Receptor Plug Domain OIO60_20155 PF00593 TonB dependent receptor