locus-tag class description N4T38_00005 PF00308 Bacterial dnaA protein N4T38_00005 PF08299 Bacterial dnaA protein helix-turn-helix N4T38_00005 PF11638 DnaA N-terminal domain N4T38_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain N4T38_00010 PF02767 DNA polymerase III beta subunit, central domain N4T38_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain N4T38_00015 PF02463 RecF/RecN/SMC N terminal domain N4T38_00020 PF00204 DNA gyrase B N4T38_00020 PF00986 DNA gyrase B subunit, carboxyl terminus N4T38_00020 PF18053 DNA gyrase B subunit insert domain N4T38_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_00020 PF01751 Toprim domain N4T38_00030 PF09335 SNARE associated Golgi protein N4T38_00035 PF00005 ABC transporter N4T38_00035 PF12848 ABC transporter N4T38_00055 PF01521 Iron-sulphur cluster biosynthesis N4T38_00060 PF00561 alpha/beta hydrolase fold N4T38_00065 PF03702 Anhydro-N-acetylmuramic acid kinase N4T38_00070 PF00579 tRNA synthetases class I (W and Y) N4T38_00110 PF00209 Sodium:neurotransmitter symporter family N4T38_00120 PF01189 16S rRNA methyltransferase RsmB/F N4T38_00120 PF01029 NusB family N4T38_00125 PF02911 Formyl transferase, C-terminal domain N4T38_00125 PF00551 Formyl transferase N4T38_00130 PF00920 Dehydratase family N4T38_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_00145 PF03466 LysR substrate binding domain N4T38_00150 PF00860 Permease family N4T38_00155 PF00311 Phosphoenolpyruvate carboxylase N4T38_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region N4T38_00160 PF00440 Bacterial regulatory proteins, tetR family N4T38_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T38_00170 PF00873 AcrB/AcrD/AcrF family N4T38_00180 PF00684 DnaJ central domain N4T38_00180 PF00226 DnaJ domain N4T38_00180 PF01556 DnaJ C terminal domain N4T38_00190 PF05173 Dihydrodipicolinate reductase, C-terminus N4T38_00190 PF01113 Dihydrodipicolinate reductase, N-terminus N4T38_00200 PF07690 Major Facilitator Superfamily N4T38_00205 PF00248 Aldo/keto reductase family N4T38_00210 PF03466 LysR substrate binding domain N4T38_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_00225 PF00392 Bacterial regulatory proteins, gntR family N4T38_00225 PF00155 Aminotransferase class I and II N4T38_00230 PF00107 Zinc-binding dehydrogenase N4T38_00230 PF08240 Alcohol dehydrogenase GroES-like domain N4T38_00235 PF03352 Methyladenine glycosylase N4T38_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein N4T38_00250 PF10576 Iron-sulfur binding domain of endonuclease III N4T38_00250 PF00633 Helix-hairpin-helix motif N4T38_00250 PF14815 NUDIX domain N4T38_00265 PF07043 Protein of unknown function (DUF1328) N4T38_00270 PF03692 Putative zinc- or iron-chelating domain N4T38_00280 PF13610 DDE domain N4T38_00290 PF00857 Isochorismatase family N4T38_00295 PF00701 Dihydrodipicolinate synthetase family N4T38_00305 PF01259 SAICAR synthetase N4T38_00315 PF01226 Formate/nitrite transporter N4T38_00320 PF16193 AAA C-terminal domain N4T38_00320 PF00004 ATPase family associated with various cellular activities (AAA) N4T38_00320 PF12002 MgsA AAA+ ATPase C terminal N4T38_00330 PF13610 DDE domain N4T38_00340 PF10706 Aminoglycoside-2''-adenylyltransferase N4T38_00345 PF13427 Domain of unknown function (DUF4111) N4T38_00345 PF01909 Nucleotidyltransferase domain N4T38_00355 PF00905 Penicillin binding protein transpeptidase domain N4T38_00365 PF00893 Small Multidrug Resistance protein N4T38_00370 PF00809 Pterin binding enzyme N4T38_00380 PF01695 IstB-like ATP binding protein N4T38_00385 PF00665 Integrase core domain N4T38_00390 PF00665 Integrase core domain N4T38_00390 PF13276 HTH-like domain N4T38_00390 PF01527 Transposase N4T38_00390 PF13333 Integrase core domain N4T38_00405 PF13610 DDE domain N4T38_00415 PF01554 MatE N4T38_00420 PF04463 Protein of unknown function (DUF523) N4T38_00425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T38_00435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T38_00440 PF02798 Glutathione S-transferase, N-terminal domain N4T38_00440 PF14497 Glutathione S-transferase, C-terminal domain N4T38_00450 PF00324 Amino acid permease N4T38_00460 PF07683 Cobalamin synthesis protein cobW C-terminal domain N4T38_00460 PF02492 CobW/HypB/UreG, nucleotide-binding domain N4T38_00470 PF07702 UTRA domain N4T38_00470 PF00392 Bacterial regulatory proteins, gntR family N4T38_00475 PF05962 HutD N4T38_00480 PF17391 Urocanase N-terminal domain N4T38_00480 PF17392 Urocanase C-terminal domain N4T38_00480 PF01175 Urocanase Rossmann-like domain N4T38_00485 PF00221 Aromatic amino acid lyase N4T38_00495 PF01979 Amidohydrolase family N4T38_00500 PF00491 Arginase family N4T38_00515 PF01177 Asp/Glu/Hydantoin racemase N4T38_00520 PF01380 SIS domain N4T38_00525 PF00132 Bacterial transferase hexapeptide (six repeats) N4T38_00525 PF14602 Hexapeptide repeat of succinyl-transferase N4T38_00525 PF12804 MobA-like NTP transferase domain N4T38_00530 PF04608 Phosphatidylglycerophosphatase A N4T38_00535 PF00586 AIR synthase related protein, N-terminal domain N4T38_00535 PF02769 AIR synthase related protein, C-terminal domain N4T38_00540 PF01029 NusB family N4T38_00545 PF00885 6,7-dimethyl-8-ribityllumazine synthase N4T38_00550 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N4T38_00550 PF00925 GTP cyclohydrolase II N4T38_00575 PF02580 D-Tyr-tRNA(Tyr) deacylase N4T38_00580 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain N4T38_00580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family N4T38_00585 PF00581 Rhodanese-like domain N4T38_00590 PF02666 Phosphatidylserine decarboxylase N4T38_00600 PF11808 Phosphate regulon sensor protein PhoR N4T38_00600 PF00989 PAS fold N4T38_00600 PF00512 His Kinase A (phospho-acceptor) domain N4T38_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_00605 PF00072 Response regulator receiver domain N4T38_00605 PF00486 Transcriptional regulatory protein, C terminal N4T38_00615 PF00106 short chain dehydrogenase N4T38_00620 PF01554 MatE N4T38_00625 PF00155 Aminotransferase class I and II N4T38_00630 PF04286 Protein of unknown function (DUF445) N4T38_00645 PF04262 Glutamate-cysteine ligase N4T38_00650 PF02600 Disulfide bond formation protein DsbB N4T38_00655 PF13296 Putative type VI secretion system Rhs element Vgr N4T38_00655 PF04717 Type VI secretion system, phage-baseplate injector N4T38_00655 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) N4T38_00690 PF05728 Uncharacterised protein family (UPF0227) N4T38_00695 PF01751 Toprim domain N4T38_00695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_00695 PF00986 DNA gyrase B subunit, carboxyl terminus N4T38_00695 PF00204 DNA gyrase B N4T38_00700 PF04115 Ureidoglycolate lyase N4T38_00705 PF03561 Allantoicase repeat N4T38_00710 PF01494 FAD binding domain N4T38_00720 PF00860 Permease family N4T38_00725 PF00576 HIUase/Transthyretin family N4T38_00755 PF02683 Cytochrome C biogenesis protein transmembrane region N4T38_00755 PF11412 Disulphide bond corrector protein DsbC N4T38_00760 PF00990 Diguanylate cyclase, GGDEF domain N4T38_00760 PF07694 5TMR of 5TMR-LYT N4T38_00765 PF07859 alpha/beta hydrolase fold N4T38_00775 PF03960 ArsC family N4T38_00780 PF03372 Endonuclease/Exonuclease/phosphatase family N4T38_00785 PF00156 Phosphoribosyl transferase domain N4T38_00795 PF02463 RecF/RecN/SMC N terminal domain N4T38_00800 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) N4T38_00805 PF00593 TonB dependent receptor N4T38_00805 PF07715 TonB-dependent Receptor Plug Domain N4T38_00815 PF02951 Prokaryotic glutathione synthetase, N-terminal domain N4T38_00815 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain N4T38_00820 PF03033 Glycosyltransferase family 28 N-terminal domain N4T38_00820 PF04101 Glycosyltransferase family 28 C-terminal domain N4T38_00825 PF01225 Mur ligase family, catalytic domain N4T38_00825 PF02875 Mur ligase family, glutamate ligase domain N4T38_00825 PF08245 Mur ligase middle domain N4T38_00830 PF01820 D-ala D-ala ligase N-terminus N4T38_00830 PF07478 D-ala D-ala ligase C-terminus N4T38_00835 PF03799 Cell division protein FtsQ N4T38_00835 PF08478 POTRA domain, FtsQ-type N4T38_00840 PF02491 SHS2 domain inserted in FTSA N4T38_00845 PF00091 Tubulin/FtsZ family, GTPase domain N4T38_00845 PF12327 FtsZ family, C-terminal domain N4T38_00850 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase N4T38_00860 PF01551 Peptidase family M23 N4T38_00865 PF17831 Pyruvate dehydrogenase E1 component middle domain N4T38_00865 PF00456 Transketolase, thiamine diphosphate binding domain N4T38_00870 PF02817 e3 binding domain N4T38_00870 PF00364 Biotin-requiring enzyme N4T38_00870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N4T38_00880 PF01169 Uncharacterized protein family UPF0016 N4T38_00885 PF07715 TonB-dependent Receptor Plug Domain N4T38_00885 PF00593 TonB dependent receptor N4T38_00890 PF00258 Flavodoxin N4T38_00890 PF01613 Flavin reductase like domain N4T38_00895 PF03692 Putative zinc- or iron-chelating domain N4T38_00900 PF00571 CBS domain N4T38_00900 PF00478 IMP dehydrogenase / GMP reductase domain N4T38_00905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T38_00905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T38_00905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T38_00905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T38_00910 PF01243 Pyridoxamine 5'-phosphate oxidase N4T38_00910 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region N4T38_00915 PF17768 RecJ OB domain N4T38_00915 PF02272 DHHA1 domain N4T38_00915 PF01368 DHH family N4T38_00935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T38_00940 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) N4T38_00945 PF04452 RNA methyltransferase N4T38_00950 PF00924 Mechanosensitive ion channel N4T38_00960 PF16177 Acetyl-coenzyme A synthetase N-terminus N4T38_00960 PF00501 AMP-binding enzyme N4T38_00960 PF13193 AMP-binding enzyme C-terminal domain N4T38_00965 PF00857 Isochorismatase family N4T38_00970 PF01037 Lrp/AsnC ligand binding domain N4T38_00975 PF00296 Luciferase-like monooxygenase N4T38_00980 PF03358 NADPH-dependent FMN reductase N4T38_00985 PF00196 Bacterial regulatory proteins, luxR family N4T38_00985 PF00072 Response regulator receiver domain N4T38_00995 PF00672 HAMP domain N4T38_00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_00995 PF00512 His Kinase A (phospho-acceptor) domain N4T38_00995 PF01627 Hpt domain N4T38_00995 PF00072 Response regulator receiver domain N4T38_01000 PF04341 Protein of unknown function, DUF485 N4T38_01005 PF00474 Sodium:solute symporter family N4T38_01025 PF00990 Diguanylate cyclase, GGDEF domain N4T38_01030 PF00005 ABC transporter N4T38_01030 PF17760 UvrA interaction domain N4T38_01030 PF17755 UvrA DNA-binding domain N4T38_01035 PF16925 Tetracyclin repressor-like, C-terminal domain N4T38_01035 PF00440 Bacterial regulatory proteins, tetR family N4T38_01040 PF08240 Alcohol dehydrogenase GroES-like domain N4T38_01040 PF00107 Zinc-binding dehydrogenase N4T38_01050 PF06942 GlpM protein N4T38_01055 PF08543 Phosphomethylpyrimidine kinase N4T38_01055 PF02581 Thiamine monophosphate synthase N4T38_01055 PF03070 TENA/THI-4/PQQC family N4T38_01065 PF07690 Major Facilitator Superfamily N4T38_01070 PF00436 Single-strand binding protein family N4T38_01080 PF03591 AzlC protein N4T38_01090 PF00324 Amino acid permease N4T38_01095 PF00392 Bacterial regulatory proteins, gntR family N4T38_01095 PF00155 Aminotransferase class I and II N4T38_01100 PF00202 Aminotransferase class-III N4T38_01105 PF00171 Aldehyde dehydrogenase family N4T38_01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_01115 PF00857 Isochorismatase family N4T38_01120 PF05726 Pirin C-terminal cupin domain N4T38_01120 PF02678 Pirin N4T38_01125 PF01593 Flavin containing amine oxidoreductase N4T38_01140 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term N4T38_01140 PF12833 Helix-turn-helix domain N4T38_01145 PF13737 Transposase DDE domain N4T38_01150 PF13556 PucR C-terminal helix-turn-helix domain N4T38_01150 PF06018 CodY GAF-like domain N4T38_01150 PF17853 GGDEF-like domain N4T38_01165 PF00171 Aldehyde dehydrogenase family N4T38_01180 PF03050 Transposase IS66 family N4T38_01180 PF13817 IS66 C-terminal element N4T38_01180 PF13005 zinc-finger binding domain of transposase IS66 N4T38_01180 PF13007 Transposase C of IS166 homeodomain N4T38_01185 PF00324 Amino acid permease N4T38_01195 PF07690 Major Facilitator Superfamily N4T38_01200 PF03466 LysR substrate binding domain N4T38_01200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_01220 PF00248 Aldo/keto reductase family N4T38_01225 PF02311 AraC-like ligand binding domain N4T38_01225 PF12833 Helix-turn-helix domain N4T38_01255 PF01638 HxlR-like helix-turn-helix N4T38_01260 PF02525 Flavodoxin-like fold N4T38_01280 PF02705 K+ potassium transporter N4T38_01305 PF00230 Major intrinsic protein N4T38_01320 PF00977 Histidine biosynthesis protein N4T38_01325 PF01636 Phosphotransferase enzyme family N4T38_01340 PF03992 Antibiotic biosynthesis monooxygenase N4T38_01355 PF00977 Histidine biosynthesis protein N4T38_01370 PF00117 Glutamine amidotransferase class-I N4T38_01375 PF00475 Imidazoleglycerol-phosphate dehydratase N4T38_01395 PF00583 Acetyltransferase (GNAT) family N4T38_01400 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain N4T38_01400 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain N4T38_01410 PF00512 His Kinase A (phospho-acceptor) domain N4T38_01410 PF00672 HAMP domain N4T38_01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_01415 PF00486 Transcriptional regulatory protein, C terminal N4T38_01415 PF00072 Response regulator receiver domain N4T38_01420 PF09371 Tex-like protein N-terminal domain N4T38_01420 PF17674 HHH domain N4T38_01420 PF16921 Tex protein YqgF-like domain N4T38_01420 PF00575 S1 RNA binding domain N4T38_01425 PF01740 STAS domain N4T38_01425 PF00916 Sulfate permease family N4T38_01430 PF00106 short chain dehydrogenase N4T38_01435 PF01053 Cys/Met metabolism PLP-dependent enzyme N4T38_01440 PF00005 ABC transporter N4T38_01440 PF12848 ABC transporter N4T38_01465 PF00529 HlyD membrane-fusion protein of T1SS N4T38_01465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T38_01470 PF00873 AcrB/AcrD/AcrF family N4T38_01475 PF01545 Cation efflux family N4T38_01505 PF00324 Amino acid permease N4T38_01520 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4T38_01535 PF01795 MraW methylase family N4T38_01545 PF00905 Penicillin binding protein transpeptidase domain N4T38_01545 PF03717 Penicillin-binding Protein dimerisation domain N4T38_01550 PF02875 Mur ligase family, glutamate ligase domain N4T38_01550 PF08245 Mur ligase middle domain N4T38_01550 PF01225 Mur ligase family, catalytic domain N4T38_01555 PF01225 Mur ligase family, catalytic domain N4T38_01555 PF02875 Mur ligase family, glutamate ligase domain N4T38_01555 PF08245 Mur ligase middle domain N4T38_01560 PF00953 Glycosyl transferase family 4 N4T38_01570 PF13847 Methyltransferase domain N4T38_01575 PF00905 Penicillin binding protein transpeptidase domain N4T38_01575 PF00912 Transglycosylase N4T38_01575 PF17092 Penicillin-binding protein OB-like domain N4T38_01580 PF11104 Type IV pilus assembly protein PilM; N4T38_01585 PF05137 Fimbrial assembly protein (PilN) N4T38_01590 PF04350 Pilus assembly protein, PilO N4T38_01600 PF00263 Bacterial type II and III secretion system protein N4T38_01600 PF07660 Secretin and TonB N terminus short domain N4T38_01600 PF03958 Bacterial type II/III secretion system short domain N4T38_01600 PF11741 AMIN domain N4T38_01605 PF01202 Shikimate kinase N4T38_01610 PF01761 3-dehydroquinate synthase N4T38_01620 PF01645 Conserved region in glutamate synthase N4T38_01620 PF00310 Glutamine amidotransferases class-II N4T38_01620 PF04898 Glutamate synthase central domain N4T38_01620 PF01493 GXGXG motif N4T38_01625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N4T38_01625 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_01635 PF04011 LemA family N4T38_01640 PF04536 TPM domain N4T38_01650 PF07963 Prokaryotic N-terminal methylation motif N4T38_01650 PF00114 Pilin (bacterial filament) N4T38_01660 PF15864 Protein glycosylation ligase N4T38_01660 PF11846 Virulence factor membrane-bound polymerase, C-terminal N4T38_01660 PF04932 O-Antigen ligase N4T38_01665 PF00210 Ferritin-like domain N4T38_01670 PF04324 BFD-like [2Fe-2S] binding domain N4T38_01675 PF01042 Endoribonuclease L-PSP N4T38_01680 PF13291 ACT domain N4T38_01680 PF04607 Region found in RelA / SpoT proteins N4T38_01680 PF02824 TGS domain N4T38_01690 PF01192 RNA polymerase Rpb6 N4T38_01695 PF00625 Guanylate kinase N4T38_01700 PF02401 LytB protein N4T38_01740 PF00886 Ribosomal protein S16 N4T38_01745 PF01782 RimM N-terminal domain N4T38_01745 PF05239 PRC-barrel domain N4T38_01750 PF01746 tRNA (Guanine-1)-methyltransferase N4T38_01755 PF01245 Ribosomal protein L19 N4T38_01760 PF00561 alpha/beta hydrolase fold N4T38_01765 PF03280 Proteobacterial lipase chaperone protein N4T38_01770 PF09157 Pseudouridine synthase II TruB, C-terminal N4T38_01770 PF16198 tRNA pseudouridylate synthase B C-terminal domain N4T38_01770 PF01509 TruB family pseudouridylate synthase (N terminal domain) N4T38_01775 PF01925 Sulfite exporter TauE/SafE N4T38_01785 PF00892 EamA-like transporter family N4T38_01790 PF00892 EamA-like transporter family N4T38_01795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4T38_01795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4T38_01800 PF01565 FAD binding domain N4T38_01800 PF02913 FAD linked oxidases, C-terminal domain N4T38_01815 PF03992 Antibiotic biosynthesis monooxygenase N4T38_01820 PF02525 Flavodoxin-like fold N4T38_01845 PF03050 Transposase IS66 family N4T38_01845 PF13005 zinc-finger binding domain of transposase IS66 N4T38_01845 PF13007 Transposase C of IS166 homeodomain N4T38_01845 PF13817 IS66 C-terminal element N4T38_01855 PF12805 FUSC-like inner membrane protein yccS N4T38_01860 PF00080 Copper/zinc superoxide dismutase (SODC) N4T38_01865 PF01594 AI-2E family transporter N4T38_01870 PF13614 AAA domain N4T38_01890 PF08241 Methyltransferase domain N4T38_01900 PF00324 Amino acid permease N4T38_01905 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain N4T38_01905 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase N4T38_01910 PF00202 Aminotransferase class-III N4T38_01915 PF04958 Arginine N-succinyltransferase beta subunit N4T38_01920 PF00171 Aldehyde dehydrogenase family N4T38_01925 PF04996 Succinylarginine dihydrolase N4T38_01930 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family N4T38_01945 PF05922 Peptidase inhibitor I9 N4T38_01945 PF00082 Subtilase family N4T38_01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_01960 PF03466 LysR substrate binding domain N4T38_01980 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system N4T38_01985 PF05746 DALR anticodon binding domain N4T38_01985 PF02092 Glycyl-tRNA synthetase beta subunit N4T38_01990 PF02091 Glycyl-tRNA synthetase alpha subunit N4T38_02015 PF00571 CBS domain N4T38_02020 PF04024 PspC domain N4T38_02030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_02030 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T38_02030 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_02030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_02040 PF18317 Shikimate 5'-dehydrogenase C-terminal domain N4T38_02040 PF01488 Shikimate / quinate 5-dehydrogenase N4T38_02040 PF08501 Shikimate dehydrogenase substrate binding domain N4T38_02045 PF01218 Coproporphyrinogen III oxidase N4T38_02050 PF00925 GTP cyclohydrolase II N4T38_02055 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N4T38_02055 PF02780 Transketolase, C-terminal domain N4T38_02055 PF02779 Transketolase, pyrimidine binding domain N4T38_02060 PF00459 Inositol monophosphatase family N4T38_02065 PF03880 DbpA RNA binding domain N4T38_02065 PF00270 DEAD/DEAH box helicase N4T38_02065 PF12343 Cold shock protein DEAD box A N4T38_02065 PF00271 Helicase conserved C-terminal domain N4T38_02075 PF00005 ABC transporter N4T38_02080 PF02405 Permease MlaE N4T38_02090 PF05494 MlaC protein N4T38_02100 PF01544 CorA-like Mg2+ transporter protein N4T38_02105 PF03641 Possible lysine decarboxylase N4T38_02110 PF00293 NUDIX domain N4T38_02115 PF00156 Phosphoribosyl transferase domain N4T38_02120 PF00270 DEAD/DEAH box helicase N4T38_02120 PF00271 Helicase conserved C-terminal domain N4T38_02120 PF17191 RecG wedge domain N4T38_02135 PF01553 Acyltransferase N4T38_02145 PF00375 Sodium:dicarboxylate symporter family N4T38_02155 PF01926 50S ribosome-binding GTPase N4T38_02160 PF02082 Transcriptional regulator N4T38_02165 PF00970 Oxidoreductase FAD-binding domain N4T38_02165 PF00175 Oxidoreductase NAD-binding domain N4T38_02165 PF00042 Globin N4T38_02175 PF05872 Bacterial protein of unknown function (DUF853) N4T38_02180 PF01053 Cys/Met metabolism PLP-dependent enzyme N4T38_02185 PF00117 Glutamine amidotransferase class-I N4T38_02190 PF00338 Ribosomal protein S10p/S20e N4T38_02195 PF00297 Ribosomal protein L3 N4T38_02200 PF00573 Ribosomal protein L4/L1 family N4T38_02205 PF00276 Ribosomal protein L23 N4T38_02210 PF00181 Ribosomal Proteins L2, RNA binding domain N4T38_02210 PF03947 Ribosomal Proteins L2, C-terminal domain N4T38_02215 PF00203 Ribosomal protein S19 N4T38_02220 PF00237 Ribosomal protein L22p/L17e N4T38_02230 PF00252 Ribosomal protein L16p/L10e N4T38_02235 PF00831 Ribosomal L29 protein N4T38_02240 PF00366 Ribosomal protein S17 N4T38_02245 PF00238 Ribosomal protein L14p/L23e N4T38_02250 PF00467 KOW motif N4T38_02250 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 N4T38_02255 PF00281 Ribosomal protein L5 N4T38_02255 PF00673 ribosomal L5P family C-terminus N4T38_02260 PF00253 Ribosomal protein S14p/S29e N4T38_02265 PF00410 Ribosomal protein S8 N4T38_02270 PF00347 Ribosomal protein L6 N4T38_02275 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast N4T38_02280 PF03719 Ribosomal protein S5, C-terminal domain N4T38_02280 PF00333 Ribosomal protein S5, N-terminal domain N4T38_02285 PF00327 Ribosomal protein L30p/L7e N4T38_02290 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A N4T38_02295 PF00344 SecY translocase N4T38_02300 PF00444 Ribosomal protein L36 N4T38_02305 PF00416 Ribosomal protein S13/S18 N4T38_02310 PF00411 Ribosomal protein S11 N4T38_02315 PF01479 S4 domain N4T38_02315 PF00163 Ribosomal protein S4/S9 N-terminal domain N4T38_02320 PF01000 RNA polymerase Rpb3/RpoA insert domain N4T38_02320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain N4T38_02320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain N4T38_02325 PF01196 Ribosomal protein L17 N4T38_02330 PF00743 Flavin-binding monooxygenase-like N4T38_02335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_02335 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_02335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_02340 PF03937 Flavinator of succinate dehydrogenase N4T38_02370 PF09526 Probable metal-binding protein (DUF2387) N4T38_02375 PF01432 Peptidase family M3 N4T38_02380 PF00575 S1 RNA binding domain N4T38_02380 PF17876 Cold shock domain N4T38_02380 PF08461 Ribonuclease R winged-helix domain N4T38_02380 PF08206 Ribonuclease B OB domain N4T38_02380 PF00773 RNB domain N4T38_02425 PF01557 Fumarylacetoacetate (FAA) hydrolase family N4T38_02435 PF00892 EamA-like transporter family N4T38_02440 PF03631 Virulence factor BrkB N4T38_02445 PF03358 NADPH-dependent FMN reductase N4T38_02470 PF02130 Uncharacterized protein family UPF0054 N4T38_02475 PF02562 PhoH-like protein N4T38_02480 PF04055 Radical SAM superfamily N4T38_02480 PF01938 TRAM domain N4T38_02480 PF00919 Uncharacterized protein family UPF0004 N4T38_02485 PF01464 Transglycosylase SLT domain N4T38_02485 PF10145 Phage-related minor tail protein N4T38_02485 PF01551 Peptidase family M23 N4T38_02495 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N4T38_02495 PF00056 lactate/malate dehydrogenase, NAD binding domain N4T38_02515 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ N4T38_02520 PF01066 CDP-alcohol phosphatidyltransferase N4T38_02565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_02565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_02565 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_02570 PF00440 Bacterial regulatory proteins, tetR family N4T38_02570 PF17932 Tetracyclin repressor-like, C-terminal domain N4T38_02585 PF01039 Carboxyl transferase domain N4T38_02590 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_02590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_02590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_02595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T38_02595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T38_02595 PF00378 Enoyl-CoA hydratase/isomerase N4T38_02600 PF02785 Biotin carboxylase C-terminal domain N4T38_02600 PF00289 Biotin carboxylase, N-terminal domain N4T38_02600 PF00364 Biotin-requiring enzyme N4T38_02600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T38_02610 PF04386 Stringent starvation protein B N4T38_02615 PF13417 Glutathione S-transferase, N-terminal domain N4T38_02615 PF00043 Glutathione S-transferase, C-terminal domain N4T38_02620 PF00380 Ribosomal protein S9/S16 N4T38_02625 PF00572 Ribosomal protein L13 N4T38_02630 PF04166 Pyridoxal phosphate biosynthetic protein PdxA N4T38_02635 PF00398 Ribosomal RNA adenine dimethylase N4T38_02640 PF00149 Calcineurin-like phosphoesterase N4T38_02660 PF01926 50S ribosome-binding GTPase N4T38_02660 PF13167 GTP-binding GTPase N-terminal N4T38_02660 PF16360 GTP-binding GTPase Middle Region N4T38_02670 PF13091 PLD-like domain N4T38_02675 PF00149 Calcineurin-like phosphoesterase N4T38_02675 PF10518 TAT (twin-arginine translocation) pathway signal sequence N4T38_02680 PF00691 OmpA family N4T38_02680 PF01389 OmpA-like transmembrane domain N4T38_02685 PF17152 Periplasmic sensor domain N4T38_02685 PF00990 Diguanylate cyclase, GGDEF domain N4T38_02720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T38_02720 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_02730 PF00753 Metallo-beta-lactamase superfamily N4T38_02730 PF04273 Putative phosphatase (DUF442) N4T38_02735 PF00561 alpha/beta hydrolase fold N4T38_02740 PF00085 Thioredoxin N4T38_02745 PF03061 Thioesterase superfamily N4T38_02755 PF04461 Protein of unknown function (DUF520) N4T38_02765 PF01266 FAD dependent oxidoreductase N4T38_02765 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N4T38_02775 PF03795 YCII-related domain N4T38_02780 PF04279 Intracellular septation protein A N4T38_02785 PF02811 PHP domain N4T38_02790 PF01062 Bestrophin, RFP-TM, chloride channel N4T38_02795 PF04002 RadC-like JAB domain N4T38_02800 PF02441 Flavoprotein N4T38_02800 PF04127 DNA / pantothenate metabolism flavoprotein N4T38_02805 PF02355 Protein export membrane protein N4T38_02805 PF07549 SecD/SecF GG Motif N4T38_02810 PF07549 SecD/SecF GG Motif N4T38_02810 PF13721 SecD export protein N-terminal TM region N4T38_02810 PF02355 Protein export membrane protein N4T38_02815 PF02699 Preprotein translocase subunit N4T38_02820 PF01702 Queuine tRNA-ribosyltransferase N4T38_02835 PF02547 Queuosine biosynthesis protein N4T38_02850 PF04245 37-kD nucleoid-associated bacterial protein N4T38_02870 PF01627 Hpt domain N4T38_02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_02870 PF00512 His Kinase A (phospho-acceptor) domain N4T38_02870 PF00072 Response regulator receiver domain N4T38_02870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N4T38_02870 PF00672 HAMP domain N4T38_02875 PF08335 GlnD PII-uridylyltransferase N4T38_02875 PF03710 Glutamate-ammonia ligase adenylyltransferase N4T38_02880 PF01063 Amino-transferase class IV N4T38_02895 PF01522 Polysaccharide deacetylase N4T38_02900 PF00535 Glycosyl transferase family 2 N4T38_02905 PF13439 Glycosyltransferase Family 4 N4T38_02905 PF00534 Glycosyl transferases group 1 N4T38_02930 PF13936 Helix-turn-helix domain N4T38_02930 PF00665 Integrase core domain N4T38_02940 PF03275 UDP-galactopyranose mutase N4T38_02950 PF11380 Stealth protein CR2, conserved region 2 N4T38_02950 PF17101 Stealth protein CR1, conserved region 1 N4T38_02950 PF17102 Stealth protein CR3, conserved region 3 N4T38_02955 PF00152 tRNA synthetases class II (D, K and N) N4T38_02955 PF02938 GAD domain N4T38_02955 PF01336 OB-fold nucleic acid binding domain N4T38_02965 PF07715 TonB-dependent Receptor Plug Domain N4T38_02965 PF00593 TonB dependent receptor N4T38_02985 PF06146 Phosphate-starvation-inducible E N4T38_02990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_02990 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T38_02990 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_02990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_02995 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T38_02995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_02995 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_02995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_03005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_03005 PF00512 His Kinase A (phospho-acceptor) domain N4T38_03005 PF00672 HAMP domain N4T38_03010 PF00072 Response regulator receiver domain N4T38_03010 PF00486 Transcriptional regulatory protein, C terminal N4T38_03015 PF02696 Uncharacterized ACR, YdiU/UPF0061 family N4T38_03030 PF03009 Glycerophosphoryl diester phosphodiesterase family N4T38_03035 PF01923 Cobalamin adenosyltransferase N4T38_03040 PF07715 TonB-dependent Receptor Plug Domain N4T38_03040 PF00593 TonB dependent receptor N4T38_03045 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N4T38_03050 PF00291 Pyridoxal-phosphate dependent enzyme N4T38_03075 PF00290 Tryptophan synthase alpha chain N4T38_03080 PF01039 Carboxyl transferase domain N4T38_03085 PF02875 Mur ligase family, glutamate ligase domain N4T38_03085 PF08245 Mur ligase middle domain N4T38_03100 PF00753 Metallo-beta-lactamase superfamily N4T38_03105 PF00578 AhpC/TSA family N4T38_03105 PF10417 C-terminal domain of 1-Cys peroxiredoxin N4T38_03110 PF02810 SEC-C motif N4T38_03110 PF01043 SecA preprotein cross-linking domain N4T38_03110 PF07517 SecA DEAD-like domain N4T38_03110 PF07516 SecA Wing and Scaffold domain N4T38_03120 PF07690 Major Facilitator Superfamily N4T38_03120 PF00083 Sugar (and other) transporter N4T38_03125 PF03006 Haemolysin-III related N4T38_03150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T38_03150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T38_03150 PF00378 Enoyl-CoA hydratase/isomerase N4T38_03155 PF02803 Thiolase, C-terminal domain N4T38_03155 PF00108 Thiolase, N-terminal domain N4T38_03160 PF02311 AraC-like ligand binding domain N4T38_03160 PF12833 Helix-turn-helix domain N4T38_03165 PF02515 CoA-transferase family III N4T38_03170 PF04966 Carbohydrate-selective porin, OprB family N4T38_03175 PF01011 PQQ enzyme repeat N4T38_03180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N4T38_03180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N4T38_03190 PF00893 Small Multidrug Resistance protein N4T38_03200 PF02803 Thiolase, C-terminal domain N4T38_03200 PF00108 Thiolase, N-terminal domain N4T38_03210 PF13505 Outer membrane protein beta-barrel domain N4T38_03210 PF00691 OmpA family N4T38_03220 PF01139 tRNA-splicing ligase RtcB N4T38_03225 PF00324 Amino acid permease N4T38_03230 PF05175 Methyltransferase small domain N4T38_03230 PF08468 Methyltransferase small domain N-terminal N4T38_03235 PF00860 Permease family N4T38_03240 PF03144 Elongation factor Tu domain 2 N4T38_03240 PF00009 Elongation factor Tu GTP binding domain N4T38_03240 PF00679 Elongation factor G C-terminus N4T38_03245 PF01741 Large-conductance mechanosensitive channel, MscL N4T38_03260 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N4T38_03260 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N4T38_03260 PF06827 Zinc finger found in FPG and IleRS N4T38_03265 PF02245 Methylpurine-DNA glycosylase (MPG) N4T38_03270 PF07715 TonB-dependent Receptor Plug Domain N4T38_03270 PF00593 TonB dependent receptor N4T38_03275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T38_03290 PF10411 Disulfide bond isomerase protein N-terminus N4T38_03290 PF13098 Thioredoxin-like domain N4T38_03295 PF01571 Aminomethyltransferase folate-binding domain N4T38_03305 PF04343 Protein of unknown function, DUF488 N4T38_03310 PF03831 PhnA domain N4T38_03310 PF08274 PhnA Zinc-Ribbon N4T38_03315 PF07411 Domain of unknown function (DUF1508) N4T38_03320 PF04073 Aminoacyl-tRNA editing domain N4T38_03320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4T38_03320 PF03129 Anticodon binding domain N4T38_03325 PF00873 AcrB/AcrD/AcrF family N4T38_03340 PF00072 Response regulator receiver domain N4T38_03345 PF00072 Response regulator receiver domain N4T38_03350 PF01584 CheW-like domain N4T38_03355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4T38_03355 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term N4T38_03370 PF07687 Peptidase dimerisation domain N4T38_03370 PF01546 Peptidase family M20/M25/M40 N4T38_03375 PF08085 Entericidin EcnA/B family N4T38_03385 PF04304 Protein of unknown function (DUF454) N4T38_03390 PF17969 L,D-transpeptidase C-terminal domain N4T38_03390 PF03734 L,D-transpeptidase catalytic domain N4T38_03430 PF00667 FAD binding domain N4T38_03430 PF00258 Flavodoxin N4T38_03430 PF00175 Oxidoreductase NAD-binding domain N4T38_03440 PF12805 FUSC-like inner membrane protein yccS N4T38_03445 PF07690 Major Facilitator Superfamily N4T38_03450 PF00881 Nitroreductase family N4T38_03465 PF01235 Sodium:alanine symporter family N4T38_03470 PF01734 Patatin-like phospholipase N4T38_03475 PF00291 Pyridoxal-phosphate dependent enzyme N4T38_03475 PF13291 ACT domain N4T38_03480 PF05992 SbmA/BacA-like family N4T38_03485 PF01431 Peptidase family M13 N4T38_03485 PF05649 Peptidase family M13 N4T38_03510 PF02934 GatB/GatE catalytic domain N4T38_03510 PF02637 GatB domain N4T38_03515 PF01425 Amidase N4T38_03520 PF02686 Glu-tRNAGln amidotransferase C subunit N4T38_03530 PF04085 rod shape-determining protein MreC N4T38_03535 PF04093 rod shape-determining protein MreD N4T38_03540 PF02545 Maf-like protein N4T38_03545 PF10150 Ribonuclease E/G family N4T38_03545 PF00575 S1 RNA binding domain N4T38_03555 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain N4T38_03555 PF06974 Protein of unknown function (DUF1298) N4T38_03560 PF01507 Phosphoadenosine phosphosulfate reductase family N4T38_03575 PF02525 Flavodoxin-like fold N4T38_03595 PF02673 Bacitracin resistance protein BacA N4T38_03600 PF06719 AraC-type transcriptional regulator N-terminus N4T38_03600 PF12833 Helix-turn-helix domain N4T38_03605 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T38_03605 PF09277 Erythronolide synthase, docking N4T38_03605 PF08990 Erythronolide synthase docking N4T38_03605 PF08240 Alcohol dehydrogenase GroES-like domain N4T38_03605 PF00698 Acyl transferase domain N4T38_03605 PF08659 KR domain N4T38_03605 PF16197 Ketoacyl-synthetase C-terminal extension N4T38_03605 PF00550 Phosphopantetheine attachment site N4T38_03605 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T38_03605 PF14765 Polyketide synthase dehydratase N4T38_03610 PF01965 DJ-1/PfpI family N4T38_03620 PF00004 ATPase family associated with various cellular activities (AAA) N4T38_03645 PF00665 Integrase core domain N4T38_03645 PF13936 Helix-turn-helix domain N4T38_03650 PF01636 Phosphotransferase enzyme family N4T38_03670 PF00692 dUTPase N4T38_03700 PF01207 Dihydrouridine synthase (Dus) N4T38_03710 PF02881 SRP54-type protein, helical bundle domain N4T38_03710 PF00448 SRP54-type protein, GTPase domain N4T38_03710 PF02978 Signal peptide binding domain N4T38_03715 PF03309 Type III pantothenate kinase N4T38_03725 PF01925 Sulfite exporter TauE/SafE N4T38_03735 PF06470 SMC proteins Flexible Hinge Domain N4T38_03735 PF02463 RecF/RecN/SMC N terminal domain N4T38_03745 PF00533 BRCA1 C Terminus (BRCT) domain N4T38_03745 PF03120 NAD-dependent DNA ligase OB-fold domain N4T38_03745 PF01653 NAD-dependent DNA ligase adenylation domain N4T38_03745 PF12826 Helix-hairpin-helix motif N4T38_03745 PF03119 NAD-dependent DNA ligase C4 zinc finger domain N4T38_03750 PF00210 Ferritin-like domain N4T38_03755 PF07690 Major Facilitator Superfamily N4T38_03760 PF00982 Glycosyltransferase family 20 N4T38_03765 PF02358 Trehalose-phosphatase N4T38_03770 PF12697 Alpha/beta hydrolase family N4T38_03770 PF08241 Methyltransferase domain N4T38_03775 PF00202 Aminotransferase class-III N4T38_03775 PF04055 Radical SAM superfamily N4T38_03775 PF06968 Biotin and Thiamin Synthesis associated domain N4T38_03780 PF00155 Aminotransferase class I and II N4T38_03795 PF00849 RNA pseudouridylate synthase N4T38_03795 PF01479 S4 domain N4T38_03800 PF04079 Segregation and condensation complex subunit ScpB N4T38_03805 PF02616 Segregation and condensation protein ScpA N4T38_03810 PF01300 Telomere recombination N4T38_03815 PF04315 Elongation factor P hydroxylase N4T38_03820 PF02620 Large ribosomal RNA subunit accumulation protein YceD N4T38_03825 PF01783 Ribosomal L32p protein family N4T38_03830 PF00698 Acyl transferase domain N4T38_03840 PF00550 Phosphopantetheine attachment site N4T38_03845 PF04972 BON domain N4T38_03845 PF01476 LysM domain N4T38_03850 PF08543 Phosphomethylpyrimidine kinase N4T38_03850 PF03070 TENA/THI-4/PQQC family N4T38_03850 PF02581 Thiamine monophosphate synthase N4T38_03860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N4T38_03875 PF02261 Aspartate decarboxylase N4T38_03880 PF01195 Peptidyl-tRNA hydrolase N4T38_03885 PF01386 Ribosomal L25p family N4T38_03890 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N4T38_03890 PF14572 Phosphoribosyl synthetase-associated domain N4T38_03915 PF08544 GHMP kinases C terminal N4T38_03915 PF00288 GHMP kinases N terminal domain N4T38_03920 PF03550 Outer membrane lipoprotein LolB N4T38_03930 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N4T38_03930 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N4T38_03930 PF01488 Shikimate / quinate 5-dehydrogenase N4T38_03935 PF10410 DnaB-helicase binding domain of primase N4T38_03935 PF08278 DNA primase DnaG DnaB-binding N4T38_03935 PF08275 DNA primase catalytic core, N-terminal domain N4T38_03935 PF01807 CHC2 zinc finger N4T38_03940 PF13525 Outer membrane lipoprotein N4T38_03945 PF00849 RNA pseudouridylate synthase N4T38_03945 PF01479 S4 domain N4T38_03950 PF02578 Multi-copper polyphenol oxidoreductase laccase N4T38_03955 PF03358 NADPH-dependent FMN reductase N4T38_03960 PF01668 SmpB protein N4T38_03995 PF06630 Enterobacterial exodeoxyribonuclease VIII N4T38_03995 PF12684 PDDEXK-like domain of unknown function (DUF3799) N4T38_04025 PF01381 Helix-turn-helix N4T38_04055 PF00772 DnaB-like helicase N terminal domain N4T38_04055 PF03796 DnaB-like helicase C terminal domain N4T38_04275 PF08346 AntA/AntB antirepressor N4T38_04275 PF10548 P22AR C-terminal domain N4T38_04285 PF01476 LysM domain N4T38_04285 PF08525 Opacity-associated protein A N-terminal motif N4T38_04285 PF01551 Peptidase family M23 N4T38_04365 PF00589 Phage integrase family N4T38_04365 PF13356 Arm DNA-binding domain N4T38_04370 PF01467 Cytidylyltransferase-like N4T38_04375 PF00037 4Fe-4S binding domain N4T38_04395 PF03466 LysR substrate binding domain N4T38_04395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_04400 PF00180 Isocitrate/isopropylmalate dehydrogenase N4T38_04405 PF02028 BCCT, betaine/carnitine/choline family transporter N4T38_04410 PF07859 alpha/beta hydrolase fold N4T38_04415 PF00355 Rieske [2Fe-2S] domain N4T38_04415 PF00848 Ring hydroxylating alpha subunit (catalytic domain) N4T38_04420 PF00171 Aldehyde dehydrogenase family N4T38_04425 PF00970 Oxidoreductase FAD-binding domain N4T38_04425 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T38_04425 PF00175 Oxidoreductase NAD-binding domain N4T38_04440 PF00795 Carbon-nitrogen hydrolase N4T38_04440 PF02540 NAD synthase N4T38_04450 PF05726 Pirin C-terminal cupin domain N4T38_04450 PF02678 Pirin N4T38_04455 PF03653 Uncharacterised protein family (UPF0093) N4T38_04460 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T38_04460 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T38_04470 PF00164 Ribosomal protein S12/S23 N4T38_04475 PF00177 Ribosomal protein S7p/S5e N4T38_04480 PF14492 Elongation Factor G, domain II N4T38_04480 PF03764 Elongation factor G, domain IV N4T38_04480 PF00009 Elongation factor Tu GTP binding domain N4T38_04480 PF03144 Elongation factor Tu domain 2 N4T38_04480 PF00679 Elongation factor G C-terminus N4T38_04485 PF00009 Elongation factor Tu GTP binding domain N4T38_04485 PF03143 Elongation factor Tu C-terminal domain N4T38_04485 PF03144 Elongation factor Tu domain 2 N4T38_04500 PF00583 Acetyltransferase (GNAT) family N4T38_04505 PF04377 Arginine-tRNA-protein transferase, C terminus N4T38_04505 PF04376 Arginine-tRNA-protein transferase, N terminus N4T38_04510 PF03588 Leucyl/phenylalanyl-tRNA protein transferase N4T38_04515 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_04520 PF01580 FtsK/SpoIIIE family N4T38_04520 PF09397 Ftsk gamma domain N4T38_04520 PF17854 FtsK alpha domain N4T38_04520 PF13491 4TM region of DNA translocase FtsK/SpoIIIE N4T38_04525 PF01810 LysE type translocator N4T38_04535 PF03776 Septum formation topological specificity factor MinE N4T38_04540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N4T38_04545 PF03775 Septum formation inhibitor MinC, C-terminal domain N4T38_04555 PF01553 Acyltransferase N4T38_04560 PF13488 Glycine zipper N4T38_04560 PF00691 OmpA family N4T38_04565 PF00580 UvrD/REP helicase N-terminal domain N4T38_04565 PF13361 UvrD-like helicase C-terminal domain N4T38_04570 PF00692 dUTPase N4T38_04575 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T38_04575 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T38_04575 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T38_04575 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T38_04580 PF00696 Amino acid kinase family N4T38_04590 PF13230 Glutamine amidotransferases class-II N4T38_04595 PF01814 Hemerythrin HHE cation binding domain N4T38_04605 PF03658 RnfH family Ubiquitin N4T38_04610 PF04355 SmpA / OmlA family N4T38_04615 PF01475 Ferric uptake regulator family N4T38_04620 PF00437 Type II/IV secretion system protein N4T38_04625 PF00437 Type II/IV secretion system protein N4T38_04630 PF01168 Alanine racemase, N-terminal domain N4T38_04640 PF12320 Type 5 capsule protein repressor C-terminal domain N4T38_04640 PF00149 Calcineurin-like phosphoesterase N4T38_04660 PF01370 NAD dependent epimerase/dehydratase family N4T38_04660 PF08338 Domain of unknown function (DUF1731) N4T38_04665 PF01266 FAD dependent oxidoreductase N4T38_04670 PF00490 Delta-aminolevulinic acid dehydratase N4T38_04675 PF03061 Thioesterase superfamily N4T38_04680 PF13533 Biotin-lipoyl like N4T38_04685 PF07690 Major Facilitator Superfamily N4T38_04750 PF12161 HsdM N-terminal domain N4T38_04750 PF02384 N-6 DNA Methylase N4T38_04760 PF00271 Helicase conserved C-terminal domain N4T38_04760 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N4T38_04760 PF04851 Type III restriction enzyme, res subunit N4T38_04760 PF08463 EcoEI R protein C-terminal N4T38_04770 PF00083 Sugar (and other) transporter N4T38_04775 PF00701 Dihydrodipicolinate synthetase family N4T38_04785 PF08281 Sigma-70, region 4 N4T38_04785 PF04542 Sigma-70 region 2 N4T38_04795 PF00593 TonB dependent receptor N4T38_04795 PF07715 TonB-dependent Receptor Plug Domain N4T38_04805 PF04575 Protein of unknown function (DUF560) N4T38_04815 PF01126 Heme oxygenase N4T38_04840 PF13520 Amino acid permease N4T38_04855 PF06039 Malate:quinone oxidoreductase (Mqo) N4T38_04860 PF05199 GMC oxidoreductase N4T38_04860 PF00732 GMC oxidoreductase N4T38_04865 PF00171 Aldehyde dehydrogenase family N4T38_04870 PF13977 BetI-type transcriptional repressor, C-terminal N4T38_04870 PF00440 Bacterial regulatory proteins, tetR family N4T38_04875 PF02028 BCCT, betaine/carnitine/choline family transporter N4T38_04880 PF02028 BCCT, betaine/carnitine/choline family transporter N4T38_04890 PF03061 Thioesterase superfamily N4T38_04900 PF07683 Cobalamin synthesis protein cobW C-terminal domain N4T38_04900 PF02492 CobW/HypB/UreG, nucleotide-binding domain N4T38_04905 PF00375 Sodium:dicarboxylate symporter family N4T38_04910 PF07152 YaeQ protein N4T38_04915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T38_04920 PF14883 Hypothetical glycosyl hydrolase family 13 N4T38_04920 PF01522 Polysaccharide deacetylase N4T38_04925 PF00535 Glycosyl transferase family 2 N4T38_04935 PF00378 Enoyl-CoA hydratase/isomerase N4T38_04950 PF09339 IclR helix-turn-helix domain N4T38_04950 PF01614 Bacterial transcriptional regulator N4T38_04955 PF00355 Rieske [2Fe-2S] domain N4T38_04965 PF00355 Rieske [2Fe-2S] domain N4T38_04975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T38_04980 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_04980 PF14759 Reductase C-terminal N4T38_04985 PF07690 Major Facilitator Superfamily N4T38_04995 PF12697 Alpha/beta hydrolase family N4T38_05005 PF03447 Homoserine dehydrogenase, NAD binding domain N4T38_05005 PF01958 Domain of unknown function DUF108 N4T38_05010 PF00171 Aldehyde dehydrogenase family N4T38_05015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4T38_05015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4T38_05015 PF00205 Thiamine pyrophosphate enzyme, central domain N4T38_05025 PF07690 Major Facilitator Superfamily N4T38_05030 PF01327 Polypeptide deformylase N4T38_05035 PF04960 Glutaminase N4T38_05040 PF02311 AraC-like ligand binding domain N4T38_05040 PF12833 Helix-turn-helix domain N4T38_05045 PF07690 Major Facilitator Superfamily N4T38_05050 PF01263 Aldose 1-epimerase N4T38_05060 PF03466 LysR substrate binding domain N4T38_05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_05070 PF07690 Major Facilitator Superfamily N4T38_05075 PF00456 Transketolase, thiamine diphosphate binding domain N4T38_05080 PF02780 Transketolase, C-terminal domain N4T38_05080 PF02779 Transketolase, pyrimidine binding domain N4T38_05085 PF02574 Homocysteine S-methyltransferase N4T38_05085 PF00809 Pterin binding enzyme N4T38_05085 PF02965 Vitamin B12 dependent methionine synthase, activation domain N4T38_05085 PF02607 B12 binding domain N4T38_05085 PF02310 B12 binding domain N4T38_05090 PF01384 Phosphate transporter family N4T38_05095 PF00291 Pyridoxal-phosphate dependent enzyme N4T38_05110 PF03781 Sulfatase-modifying factor enzyme 1 N4T38_05115 PF00884 Sulfatase N4T38_05125 PF01106 NifU-like domain N4T38_05125 PF01521 Iron-sulphur cluster biosynthesis N4T38_05130 PF00593 TonB dependent receptor N4T38_05130 PF07715 TonB-dependent Receptor Plug Domain N4T38_05140 PF00561 alpha/beta hydrolase fold N4T38_05145 PF00484 Carbonic anhydrase N4T38_05150 PF13472 GDSL-like Lipase/Acylhydrolase family N4T38_05155 PF00005 ABC transporter N4T38_05165 PF01694 Rhomboid family N4T38_05170 PF00912 Transglycosylase N4T38_05175 PF13089 Polyphosphate kinase N-terminal domain N4T38_05175 PF13090 Polyphosphate kinase C-terminal domain 2 N4T38_05175 PF02503 Polyphosphate kinase middle domain N4T38_05175 PF17941 Polyphosphate kinase C-terminal domain 1 N4T38_05190 PF03466 LysR substrate binding domain N4T38_05190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_05195 PF00561 alpha/beta hydrolase fold N4T38_05200 PF18113 Rubredoxin binding C-terminal domain N4T38_05200 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_05205 PF00301 Rubredoxin N4T38_05220 PF01336 OB-fold nucleic acid binding domain N4T38_05220 PF00152 tRNA synthetases class II (D, K and N) N4T38_05230 PF14052 Capsule assembly protein Wzi N4T38_05240 PF01507 Phosphoadenosine phosphosulfate reductase family N4T38_05245 PF00009 Elongation factor Tu GTP binding domain N4T38_05260 PF03600 Citrate transporter N4T38_05265 PF03471 Transporter associated domain N4T38_05265 PF00571 CBS domain N4T38_05265 PF01595 Cyclin M transmembrane N-terminal domain N4T38_05270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_05270 PF03466 LysR substrate binding domain N4T38_05275 PF00463 Isocitrate lyase family N4T38_05290 PF01774 UreD urease accessory protein N4T38_05295 PF00547 Urease, gamma subunit N4T38_05300 PF00699 Urease beta subunit N4T38_05310 PF01979 Amidohydrolase family N4T38_05310 PF00449 Urease alpha-subunit, N-terminal domain N4T38_05315 PF05194 UreE urease accessory protein, C-terminal domain N4T38_05315 PF02814 UreE urease accessory protein, N-terminal domain N4T38_05320 PF01730 UreF N4T38_05325 PF02492 CobW/HypB/UreG, nucleotide-binding domain N4T38_05340 PF03717 Penicillin-binding Protein dimerisation domain N4T38_05340 PF00905 Penicillin binding protein transpeptidase domain N4T38_05355 PF05191 Adenylate kinase, active site lid N4T38_05365 PF10576 Iron-sulfur binding domain of endonuclease III N4T38_05365 PF00633 Helix-hairpin-helix motif N4T38_05365 PF00730 HhH-GPD superfamily base excision DNA repair protein N4T38_05370 PF04060 Putative Fe-S cluster N4T38_05375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase N4T38_05375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain N4T38_05385 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase N4T38_05390 PF02590 Predicted SPOUT methyltransferase N4T38_05395 PF00004 ATPase family associated with various cellular activities (AAA) N4T38_05395 PF05362 Lon protease (S16) C-terminal proteolytic domain N4T38_05395 PF02190 ATP-dependent protease La (LON) substrate-binding domain N4T38_05405 PF05658 Head domain of trimeric autotransporter adhesin N4T38_05405 PF05662 Coiled stalk of trimeric autotransporter adhesin N4T38_05405 PF03895 YadA-like membrane anchor domain N4T38_05405 PF13018 Extended Signal Peptide of Type V secretion system N4T38_05410 PF00691 OmpA family N4T38_05410 PF04355 SmpA / OmlA family N4T38_05415 PF01812 5-formyltetrahydrofolate cyclo-ligase family N4T38_05710 PF01464 Transglycosylase SLT domain N4T38_05710 PF01551 Peptidase family M23 N4T38_05710 PF10145 Phage-related minor tail protein N4T38_05755 PF08019 Phosphoethanolamine transferase EptA/EptB N4T38_05755 PF00884 Sulfatase N4T38_05765 PF13737 Transposase DDE domain N4T38_05795 PF05195 Aminopeptidase P, N-terminal domain N4T38_05795 PF00557 Metallopeptidase family M24 N4T38_05800 PF01494 FAD binding domain N4T38_05805 PF01494 FAD binding domain N4T38_05815 PF13411 MerR HTH family regulatory protein N4T38_05825 PF01810 LysE type translocator N4T38_05830 PF03466 LysR substrate binding domain N4T38_05830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_05840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N4T38_05845 PF02021 Uncharacterised protein family UPF0102 N4T38_05850 PF04972 BON domain N4T38_05860 PF00293 NUDIX domain N4T38_05860 PF09297 NADH pyrophosphatase zinc ribbon domain N4T38_05885 PF00929 Exonuclease N4T38_05890 PF01476 LysM domain N4T38_05890 PF01464 Transglycosylase SLT domain N4T38_05890 PF01476 LysM domain N4T38_05890 PF01464 Transglycosylase SLT domain N4T38_05895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N4T38_05900 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_05905 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_05905 PF12911 N-terminal TM domain of oligopeptide transport permease C N4T38_05910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4T38_05910 PF00005 ABC transporter N4T38_05915 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_05915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T38_05920 PF00593 TonB dependent receptor N4T38_05920 PF07715 TonB-dependent Receptor Plug Domain N4T38_05930 PF00929 Exonuclease N4T38_05935 PF01979 Amidohydrolase family N4T38_05945 PF00764 Arginosuccinate synthase N4T38_05950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T38_05950 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_05960 PF13356 Arm DNA-binding domain N4T38_05960 PF00589 Phage integrase family N4T38_05985 PF13737 Transposase DDE domain N4T38_06000 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T38_06000 PF00175 Oxidoreductase NAD-binding domain N4T38_06005 PF00355 Rieske [2Fe-2S] domain N4T38_06015 PF03781 Sulfatase-modifying factor enzyme 1 N4T38_06020 PF00884 Sulfatase N4T38_06025 PF07690 Major Facilitator Superfamily N4T38_06035 PF05199 GMC oxidoreductase N4T38_06040 PF07859 alpha/beta hydrolase fold N4T38_06045 PF00106 short chain dehydrogenase N4T38_06050 PF00743 Flavin-binding monooxygenase-like N4T38_06055 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term N4T38_06055 PF12833 Helix-turn-helix domain N4T38_06060 PF04072 Leucine carboxyl methyltransferase N4T38_06065 PF00743 Flavin-binding monooxygenase-like N4T38_06070 PF00106 short chain dehydrogenase N4T38_06080 PF17932 Tetracyclin repressor-like, C-terminal domain N4T38_06080 PF00440 Bacterial regulatory proteins, tetR family N4T38_06085 PF02678 Pirin N4T38_06085 PF17954 Quercetinase C-terminal cupin domain N4T38_06095 PF00106 short chain dehydrogenase N4T38_06100 PF00743 Flavin-binding monooxygenase-like N4T38_06110 PF00860 Permease family N4T38_06115 PF00962 Adenosine/AMP deaminase N4T38_06120 PF01292 Prokaryotic cytochrome b561 N4T38_06130 PF01351 Ribonuclease HII N4T38_06135 PF02599 Global regulator protein family N4T38_06140 PF00696 Amino acid kinase family N4T38_06140 PF01842 ACT domain N4T38_06140 PF13840 ACT domain N4T38_06245 PF01695 IstB-like ATP binding protein N4T38_06405 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system N4T38_06430 PF01476 LysM domain N4T38_06430 PF08525 Opacity-associated protein A N-terminal motif N4T38_06430 PF01551 Peptidase family M23 N4T38_06480 PF13438 Domain of unknown function (DUF4113) N4T38_06480 PF11799 impB/mucB/samB family C-terminal domain N4T38_06480 PF00817 impB/mucB/samB family N4T38_06485 PF00717 Peptidase S24-like N4T38_06500 PF00589 Phage integrase family N4T38_06500 PF13356 Arm DNA-binding domain N4T38_06505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N4T38_06505 PF01411 tRNA synthetases class II (A) N4T38_06505 PF02272 DHHA1 domain N4T38_06510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N4T38_06510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N4T38_06515 PF13393 Histidyl-tRNA synthetase N4T38_06520 PF00709 Adenylosuccinate synthetase N4T38_06535 PF00248 Aldo/keto reductase family N4T38_06540 PF13545 Crp-like helix-turn-helix domain N4T38_06540 PF00027 Cyclic nucleotide-binding domain N4T38_06550 PF02566 OsmC-like protein N4T38_06565 PF07724 AAA domain (Cdc48 subfamily) N4T38_06565 PF17871 AAA lid domain N4T38_06565 PF02861 Clp amino terminal domain, pathogenicity island component N4T38_06565 PF10431 C-terminal, D2-small domain, of ClpB protein N4T38_06565 PF00004 ATPase family associated with various cellular activities (AAA) N4T38_06580 PF01170 Putative RNA methylase family UPF0020 N4T38_06580 PF10672 S-adenosylmethionine-dependent methyltransferase N4T38_06580 PF02926 THUMP domain N4T38_06590 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N4T38_06590 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N4T38_06595 PF01979 Amidohydrolase family N4T38_06600 PF13488 Glycine zipper N4T38_06600 PF00691 OmpA family N4T38_06610 PF00043 Glutathione S-transferase, C-terminal domain N4T38_06610 PF13417 Glutathione S-transferase, N-terminal domain N4T38_06615 PF02390 Putative methyltransferase N4T38_06625 PF00043 Glutathione S-transferase, C-terminal domain N4T38_06625 PF02798 Glutathione S-transferase, N-terminal domain N4T38_06635 PF13192 Thioredoxin domain N4T38_06635 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_06655 PF00578 AhpC/TSA family N4T38_06655 PF10417 C-terminal domain of 1-Cys peroxiredoxin N4T38_06660 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N4T38_06660 PF00270 DEAD/DEAH box helicase N4T38_06660 PF00271 Helicase conserved C-terminal domain N4T38_06660 PF11898 Domain of unknown function (DUF3418) N4T38_06660 PF04408 Helicase associated domain (HA2) N4T38_06665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N4T38_06665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N4T38_06675 PF07690 Major Facilitator Superfamily N4T38_06680 PF03594 Benzoate membrane transport protein N4T38_06685 PF00106 short chain dehydrogenase N4T38_06690 PF00175 Oxidoreductase NAD-binding domain N4T38_06690 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T38_06690 PF00970 Oxidoreductase FAD-binding domain N4T38_06700 PF00355 Rieske [2Fe-2S] domain N4T38_06700 PF00848 Ring hydroxylating alpha subunit (catalytic domain) N4T38_06710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_06710 PF03466 LysR substrate binding domain N4T38_06720 PF00970 Oxidoreductase FAD-binding domain N4T38_06720 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T38_06720 PF00175 Oxidoreductase NAD-binding domain N4T38_06730 PF02332 Methane/Phenol/Toluene Hydroxylase N4T38_06730 PF04945 YHS domain N4T38_06735 PF02406 MmoB/DmpM family N4T38_06740 PF02332 Methane/Phenol/Toluene Hydroxylase N4T38_06745 PF06099 Phenol hydroxylase subunit N4T38_06755 PF02954 Bacterial regulatory protein, Fis family N4T38_06755 PF00158 Sigma-54 interaction domain N4T38_06755 PF02830 V4R domain N4T38_06755 PF06505 Activator of aromatic catabolism N4T38_06765 PF00403 Heavy-metal-associated domain N4T38_06770 PF00376 MerR family regulatory protein N4T38_06770 PF09278 MerR, DNA binding N4T38_06805 PF02601 Exonuclease VII, large subunit N4T38_06805 PF13742 OB-fold nucleic acid binding domain N4T38_06835 PF01810 LysE type translocator N4T38_06840 PF00313 'Cold-shock' DNA-binding domain N4T38_06855 PF14748 Pyrroline-5-carboxylate reductase dimerisation N4T38_06855 PF03807 NADP oxidoreductase coenzyme F420-dependent N4T38_06880 PF07690 Major Facilitator Superfamily N4T38_06885 PF01638 HxlR-like helix-turn-helix N4T38_06905 PF13737 Transposase DDE domain N4T38_06935 PF02954 Bacterial regulatory protein, Fis family N4T38_06940 PF00580 UvrD/REP helicase N-terminal domain N4T38_06940 PF13361 UvrD-like helicase C-terminal domain N4T38_06950 PF09588 YqaJ-like viral recombinase domain N4T38_07155 PF00589 Phage integrase family N4T38_07165 PF09190 DALR domain N4T38_07165 PF01406 tRNA synthetases class I (C) catalytic domain N4T38_07170 PF00571 CBS domain N4T38_07170 PF01380 SIS domain N4T38_07185 PF03968 OstA-like protein N4T38_07190 PF00005 ABC transporter N4T38_07190 PF12399 Branched-chain amino acid ATP-binding cassette transporter N4T38_07195 PF02321 Outer membrane efflux protein N4T38_07200 PF00664 ABC transporter transmembrane region N4T38_07200 PF00005 ABC transporter N4T38_07200 PF03412 Peptidase C39 family N4T38_07210 PF01205 Uncharacterized protein family UPF0029 N4T38_07215 PF00132 Bacterial transferase hexapeptide (six repeats) N4T38_07225 PF01596 O-methyltransferase N4T38_07235 PF11953 Domain of unknown function (DUF3470) N4T38_07235 PF00037 4Fe-4S binding domain N4T38_07245 PF01624 MutS domain I N4T38_07245 PF05192 MutS domain III N4T38_07245 PF05190 MutS family domain IV N4T38_07245 PF00488 MutS domain V N4T38_07245 PF05188 MutS domain II N4T38_07250 PF01037 Lrp/AsnC ligand binding domain N4T38_07255 PF00892 EamA-like transporter family N4T38_07260 PF00563 EAL domain N4T38_07260 PF00990 Diguanylate cyclase, GGDEF domain N4T38_07260 PF03707 Bacterial signalling protein N terminal repeat N4T38_07265 PF03279 Bacterial lipid A biosynthesis acyltransferase N4T38_07280 PF07690 Major Facilitator Superfamily N4T38_07305 PF02525 Flavodoxin-like fold N4T38_07330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T38_07330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T38_07355 PF04717 Type VI secretion system, phage-baseplate injector N4T38_07355 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) N4T38_07355 PF13296 Putative type VI secretion system Rhs element Vgr N4T38_07360 PF03527 RHS protein N4T38_07360 PF05593 RHS Repeat N4T38_07365 PF13737 Transposase DDE domain N4T38_07375 PF13936 Helix-turn-helix domain N4T38_07375 PF00665 Integrase core domain N4T38_07380 PF13737 Transposase DDE domain N4T38_07400 PF13737 Transposase DDE domain N4T38_07410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_07410 PF03466 LysR substrate binding domain N4T38_07415 PF01566 Natural resistance-associated macrophage protein N4T38_07420 PF03746 LamB/YcsF family N4T38_07425 PF07286 Protein of unknown function (DUF1445) N4T38_07435 PF02785 Biotin carboxylase C-terminal domain N4T38_07435 PF00289 Biotin carboxylase, N-terminal domain N4T38_07435 PF00364 Biotin-requiring enzyme N4T38_07435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T38_07440 PF00654 Voltage gated chloride channel N4T38_07465 PF00107 Zinc-binding dehydrogenase N4T38_07465 PF13823 Alcohol dehydrogenase GroES-associated N4T38_07465 PF08240 Alcohol dehydrogenase GroES-like domain N4T38_07480 PF02785 Biotin carboxylase C-terminal domain N4T38_07480 PF00289 Biotin carboxylase, N-terminal domain N4T38_07480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T38_07485 PF02525 Flavodoxin-like fold N4T38_07490 PF01638 HxlR-like helix-turn-helix N4T38_07500 PF08753 NikR C terminal nickel binding domain N4T38_07500 PF01402 Ribbon-helix-helix protein, copG family N4T38_07505 PF01425 Amidase N4T38_07510 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T38_07515 PF00005 ABC transporter N4T38_07540 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath N4T38_07555 PF05947 Type VI secretion system, TssF N4T38_07570 PF06761 Intracellular multiplication and human macrophage-killing N4T38_07570 PF14331 ImcF-related N-terminal domain N4T38_07570 PF06744 Type VI secretion protein IcmF C-terminal N4T38_07580 PF00691 OmpA family N4T38_07580 PF01389 OmpA-like transmembrane domain N4T38_07595 PF00004 ATPase family associated with various cellular activities (AAA) N4T38_07595 PF07724 AAA domain (Cdc48 subfamily) N4T38_07595 PF17871 AAA lid domain N4T38_07595 PF10431 C-terminal, D2-small domain, of ClpB protein N4T38_07600 PF06812 ImpA, N-terminal, type VI secretion system N4T38_07605 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE N4T38_07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_07625 PF03466 LysR substrate binding domain N4T38_07635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N4T38_07640 PF07690 Major Facilitator Superfamily N4T38_07655 PF02677 Epoxyqueuosine reductase QueH N4T38_07665 PF00376 MerR family regulatory protein N4T38_07665 PF09278 MerR, DNA binding N4T38_07675 PF00701 Dihydrodipicolinate synthetase family N4T38_07685 PF00392 Bacterial regulatory proteins, gntR family N4T38_07690 PF05544 Proline racemase N4T38_07695 PF01266 FAD dependent oxidoreductase N4T38_07705 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_07705 PF04324 BFD-like [2Fe-2S] binding domain N4T38_07715 PF00083 Sugar (and other) transporter N4T38_07720 PF00171 Aldehyde dehydrogenase family N4T38_07725 PF13520 Amino acid permease N4T38_07730 PF03315 Serine dehydratase beta chain N4T38_07730 PF03313 Serine dehydratase alpha chain N4T38_07735 PF01575 MaoC like domain N4T38_07735 PF00171 Aldehyde dehydrogenase family N4T38_07740 PF05138 Phenylacetic acid catabolic protein N4T38_07745 PF06243 Phenylacetic acid degradation B N4T38_07750 PF05138 Phenylacetic acid catabolic protein N4T38_07755 PF01883 Iron-sulfur cluster assembly protein N4T38_07760 PF00970 Oxidoreductase FAD-binding domain N4T38_07760 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T38_07760 PF00175 Oxidoreductase NAD-binding domain N4T38_07765 PF00378 Enoyl-CoA hydratase/isomerase N4T38_07770 PF00378 Enoyl-CoA hydratase/isomerase N4T38_07775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T38_07775 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain N4T38_07775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T38_07780 PF00108 Thiolase, N-terminal domain N4T38_07780 PF02803 Thiolase, C-terminal domain N4T38_07785 PF14535 AMP-binding enzyme C-terminal domain N4T38_07785 PF00501 AMP-binding enzyme N4T38_07790 PF07848 PaaX-like protein N4T38_07790 PF08223 PaaX-like protein C-terminal domain N4T38_07795 PF00132 Bacterial transferase hexapeptide (six repeats) N4T38_07800 PF03061 Thioesterase superfamily N4T38_07810 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) N4T38_07830 PF00199 Catalase N4T38_07835 PF01292 Prokaryotic cytochrome b561 N4T38_07855 PF12697 Alpha/beta hydrolase family N4T38_07860 PF01613 Flavin reductase like domain N4T38_07865 PF00296 Luciferase-like monooxygenase N4T38_07870 PF00171 Aldehyde dehydrogenase family N4T38_07880 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin N4T38_07895 PF00171 Aldehyde dehydrogenase family N4T38_07900 PF02627 Carboxymuconolactone decarboxylase family N4T38_07905 PF03466 LysR substrate binding domain N4T38_07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_07910 PF02525 Flavodoxin-like fold N4T38_07915 PF09339 IclR helix-turn-helix domain N4T38_07915 PF01614 Bacterial transcriptional regulator N4T38_07920 PF01494 FAD binding domain N4T38_07925 PF07702 UTRA domain N4T38_07925 PF00392 Bacterial regulatory proteins, gntR family N4T38_07935 PF08402 TOBE domain N4T38_07935 PF00005 ABC transporter N4T38_07940 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_07945 PF01266 FAD dependent oxidoreductase N4T38_07950 PF00266 Aminotransferase class-V N4T38_07955 PF13419 Haloacid dehalogenase-like hydrolase N4T38_07960 PF07690 Major Facilitator Superfamily N4T38_07965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_07965 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_07965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_07970 PF02515 CoA-transferase family III N4T38_07975 PF09339 IclR helix-turn-helix domain N4T38_07980 PF00378 Enoyl-CoA hydratase/isomerase N4T38_07985 PF03060 Nitronate monooxygenase N4T38_07995 PF16861 Carbamoyltransferase C-terminus N4T38_07995 PF02543 Carbamoyltransferase N-terminus N4T38_08000 PF01810 LysE type translocator N4T38_08010 PF13737 Transposase DDE domain N4T38_08015 PF09339 IclR helix-turn-helix domain N4T38_08020 PF00108 Thiolase, N-terminal domain N4T38_08020 PF02803 Thiolase, C-terminal domain N4T38_08025 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain N4T38_08025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T38_08025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T38_08035 PF00378 Enoyl-CoA hydratase/isomerase N4T38_08040 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_08040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_08040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_08045 PF07690 Major Facilitator Superfamily N4T38_08050 PF01144 Coenzyme A transferase N4T38_08055 PF01144 Coenzyme A transferase N4T38_08065 PF07690 Major Facilitator Superfamily N4T38_08075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_08075 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_08075 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T38_08075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_08090 PF03466 LysR substrate binding domain N4T38_08095 PF00682 HMGL-like N4T38_08100 PF18140 Propionyl-coenzyme A carboxylase BT domain N4T38_08100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T38_08100 PF00364 Biotin-requiring enzyme N4T38_08100 PF02785 Biotin carboxylase C-terminal domain N4T38_08100 PF00289 Biotin carboxylase, N-terminal domain N4T38_08105 PF00378 Enoyl-CoA hydratase/isomerase N4T38_08110 PF01039 Carboxyl transferase domain N4T38_08115 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_08115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_08115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_08120 PF00440 Bacterial regulatory proteins, tetR family N4T38_08125 PF00501 AMP-binding enzyme N4T38_08125 PF13193 AMP-binding enzyme C-terminal domain N4T38_08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_08145 PF03466 LysR substrate binding domain N4T38_08180 PF02464 Competence-damaged protein N4T38_08180 PF00994 Probable molybdopterin binding domain N4T38_08180 PF18146 Damage-inducible protein CinA KH domain N4T38_08190 PF18011 C-terminal domain found in long catalases N4T38_08190 PF06628 Catalase-related immune-responsive N4T38_08190 PF00199 Catalase N4T38_08215 PF00717 Peptidase S24-like N4T38_08225 PF01037 Lrp/AsnC ligand binding domain N4T38_08225 PF13404 AsnC-type helix-turn-helix domain N4T38_08235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_08235 PF00512 His Kinase A (phospho-acceptor) domain N4T38_08235 PF09308 LuxQ, periplasmic N4T38_08235 PF00072 Response regulator receiver domain N4T38_08240 PF00072 Response regulator receiver domain N4T38_08255 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_08260 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_08265 PF00005 ABC transporter N4T38_08270 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T38_08275 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T38_08290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_08290 PF03466 LysR substrate binding domain N4T38_08295 PF01810 LysE type translocator N4T38_08305 PF00266 Aminotransferase class-V N4T38_08315 PF00132 Bacterial transferase hexapeptide (six repeats) N4T38_08320 PF00581 Rhodanese-like domain N4T38_08330 PF03466 LysR substrate binding domain N4T38_08330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_08335 PF02798 Glutathione S-transferase, N-terminal domain N4T38_08340 PF14834 Glutathione S-transferase, C-terminal domain N4T38_08340 PF02798 Glutathione S-transferase, N-terminal domain N4T38_08345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_08345 PF03466 LysR substrate binding domain N4T38_08350 PF03788 LrgA family N4T38_08355 PF04172 LrgB-like family N4T38_08360 PF00155 Aminotransferase class I and II N4T38_08360 PF00392 Bacterial regulatory proteins, gntR family N4T38_08375 PF07690 Major Facilitator Superfamily N4T38_08385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_08385 PF03466 LysR substrate binding domain N4T38_08390 PF16957 Malonate decarboxylase, alpha subunit, transporter N4T38_08395 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase N4T38_08400 PF06857 Malonate decarboxylase delta subunit (MdcD) N4T38_08405 PF01039 Carboxyl transferase domain N4T38_08415 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG N4T38_08420 PF00698 Acyl transferase domain N4T38_08435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_08435 PF03466 LysR substrate binding domain N4T38_08440 PF00155 Aminotransferase class I and II N4T38_08440 PF00392 Bacterial regulatory proteins, gntR family N4T38_08450 PF02322 Cytochrome bd terminal oxidase subunit II N4T38_08455 PF01654 Cytochrome bd terminal oxidase subunit I N4T38_08470 PF00296 Luciferase-like monooxygenase N4T38_08475 PF00083 Sugar (and other) transporter N4T38_08490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system N4T38_08500 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_08505 PF02668 Taurine catabolism dioxygenase TauD, TfdA family N4T38_08510 PF01177 Asp/Glu/Hydantoin racemase N4T38_08515 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin N4T38_08525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_08525 PF03466 LysR substrate binding domain N4T38_08535 PF13382 Adenine deaminase C-terminal domain N4T38_08535 PF01979 Amidohydrolase family N4T38_08545 PF03960 ArsC family N4T38_08550 PF01022 Bacterial regulatory protein, arsR family N4T38_08555 PF01758 Sodium Bile acid symporter family N4T38_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_08560 PF03466 LysR substrate binding domain N4T38_08575 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_08575 PF13192 Thioredoxin domain N4T38_08590 PF00132 Bacterial transferase hexapeptide (six repeats) N4T38_08595 PF00588 SpoU rRNA Methylase family N4T38_08600 PF07733 Bacterial DNA polymerase III alpha NTPase domain N4T38_08600 PF01336 OB-fold nucleic acid binding domain N4T38_08600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N4T38_08600 PF14579 Helix-hairpin-helix motif N4T38_08600 PF02811 PHP domain N4T38_08605 PF17763 Glutaminase/Asparaginase C-terminal domain N4T38_08605 PF00710 Asparaginase, N-terminal N4T38_08610 PF00375 Sodium:dicarboxylate symporter family N4T38_08615 PF00155 Aminotransferase class I and II N4T38_08620 PF01641 SelR domain N4T38_08625 PF00255 Glutathione peroxidase N4T38_08630 PF12852 Cupin N4T38_08630 PF12833 Helix-turn-helix domain N4T38_08640 PF00155 Aminotransferase class I and II N4T38_08645 PF01966 HD domain N4T38_08645 PF01909 Nucleotidyltransferase domain N4T38_08645 PF08335 GlnD PII-uridylyltransferase N4T38_08650 PF02222 ATP-grasp domain N4T38_08660 PF05437 Branched-chain amino acid transport protein (AzlD) N4T38_08665 PF03591 AzlC protein N4T38_08690 PF01926 50S ribosome-binding GTPase N4T38_08690 PF06071 Protein of unknown function (DUF933) N4T38_08695 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_08700 PF00005 ABC transporter N4T38_08700 PF09383 NIL domain N4T38_08705 PF03180 NLPA lipoprotein N4T38_08710 PF03180 NLPA lipoprotein N4T38_08715 PF00296 Luciferase-like monooxygenase N4T38_08725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_08725 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T38_08740 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_08745 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_08750 PF00005 ABC transporter N4T38_08760 PF01037 Lrp/AsnC ligand binding domain N4T38_08765 PF01709 Transcriptional regulator N4T38_08775 PF00440 Bacterial regulatory proteins, tetR family N4T38_08795 PF03466 LysR substrate binding domain N4T38_08795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_08805 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin N4T38_08815 PF00892 EamA-like transporter family N4T38_08835 PF13953 PapC C-terminal domain N4T38_08835 PF00577 Outer membrane usher protein N4T38_08835 PF13954 PapC N-terminal domain N4T38_08840 PF02753 Pili assembly chaperone PapD, C-terminal domain N4T38_08840 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain N4T38_08845 PF16970 Type-1 fimbrial protein, A N4T38_08860 PF06968 Biotin and Thiamin Synthesis associated domain N4T38_08860 PF04055 Radical SAM superfamily N4T38_08865 PF08331 Domain of unknown function (DUF1730) N4T38_08870 PF03853 YjeF-related protein N-terminus N4T38_08870 PF01256 Carbohydrate kinase N4T38_08875 PF02075 Crossover junction endodeoxyribonuclease RuvC N4T38_08890 PF00905 Penicillin binding protein transpeptidase domain N4T38_08910 PF02772 S-adenosylmethionine synthetase, central domain N4T38_08910 PF00438 S-adenosylmethionine synthetase, N-terminal domain N4T38_08910 PF02773 S-adenosylmethionine synthetase, C-terminal domain N4T38_08915 PF02780 Transketolase, C-terminal domain N4T38_08915 PF02779 Transketolase, pyrimidine binding domain N4T38_08915 PF00456 Transketolase, thiamine diphosphate binding domain N4T38_08925 PF04264 YceI-like domain N4T38_08935 PF09992 Phosphodiester glycosidase N4T38_08945 PF05958 tRNA (Uracil-5-)-methyltransferase N4T38_08950 PF04229 GrpB protein N4T38_08955 PF14850 DNA-binding domain of Proline dehydrogenase N4T38_08955 PF01619 Proline dehydrogenase N4T38_08955 PF00171 Aldehyde dehydrogenase family N4T38_08955 PF18327 Proline utilization A proline dehydrogenase N-terminal domain N4T38_08960 PF01037 Lrp/AsnC ligand binding domain N4T38_08965 PF00474 Sodium:solute symporter family N4T38_08970 PF02146 Sir2 family N4T38_08975 PF01597 Glycine cleavage H-protein N4T38_08980 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term N4T38_08980 PF12833 Helix-turn-helix domain N4T38_08990 PF00005 ABC transporter N4T38_08990 PF00664 ABC transporter transmembrane region N4T38_08995 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) N4T38_09000 PF06912 Protein of unknown function (DUF1275) N4T38_09005 PF00375 Sodium:dicarboxylate symporter family N4T38_09020 PF08007 Cupin superfamily protein N4T38_09025 PF02545 Maf-like protein N4T38_09035 PF00162 Phosphoglycerate kinase N4T38_09045 PF01116 Fructose-bisphosphate aldolase class-II N4T38_09050 PF09312 SurA N-terminal domain N4T38_09050 PF00639 PPIC-type PPIASE domain N4T38_09055 PF04453 LPS transport system D N4T38_09055 PF03968 OstA-like protein N4T38_09060 PF01636 Phosphotransferase enzyme family N4T38_09065 PF00483 Nucleotidyl transferase N4T38_09070 PF02527 rRNA small subunit methyltransferase G N4T38_09075 PF13614 AAA domain N4T38_09080 PF17762 HTH domain found in ParB protein N4T38_09080 PF02195 ParB-like nuclease domain N4T38_09085 PF01618 MotA/TolQ/ExbB proton channel family N4T38_09095 PF00664 ABC transporter transmembrane region N4T38_09095 PF00005 ABC transporter N4T38_09100 PF02606 Tetraacyldisaccharide-1-P 4'-kinase N4T38_09105 PF02348 Cytidylyltransferase N4T38_09110 PF09115 DNA polymerase III, delta subunit, C terminal N4T38_09120 PF01026 TatD related DNase N4T38_09135 PF07963 Prokaryotic N-terminal methylation motif N4T38_09135 PF02501 Type II secretion system (T2SS), protein I N4T38_09140 PF07963 Prokaryotic N-terminal methylation motif N4T38_09140 PF11612 Type II secretion system (T2SS), protein J N4T38_09145 PF03934 Type II secretion system (T2SS), protein K N4T38_09155 PF03167 Uracil DNA glycosylase superfamily N4T38_09165 PF14437 MafB19-like deaminase N4T38_09175 PF02224 Cytidylate kinase N4T38_09180 PF00575 S1 RNA binding domain N4T38_09185 PF00216 Bacterial DNA-binding protein N4T38_09195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N4T38_09205 PF00743 Flavin-binding monooxygenase-like N4T38_09215 PF03969 AFG1-like ATPase N4T38_09220 PF01274 Malate synthase N4T38_09230 PF02472 Biopolymer transport protein ExbD/TolR N4T38_09235 PF02472 Biopolymer transport protein ExbD/TolR N4T38_09240 PF01618 MotA/TolQ/ExbB proton channel family N4T38_09250 PF07715 TonB-dependent Receptor Plug Domain N4T38_09250 PF00593 TonB dependent receptor N4T38_09270 PF01432 Peptidase family M3 N4T38_09275 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_09280 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_09285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4T38_09285 PF00005 ABC transporter N4T38_09300 PF00459 Inositol monophosphatase family N4T38_09310 PF01649 Ribosomal protein S20 N4T38_09315 PF13460 NAD(P)H-binding N4T38_09320 PF03737 Aldolase/RraA N4T38_09340 PF02559 CarD-like/TRCF domain N4T38_09340 PF00270 DEAD/DEAH box helicase N4T38_09340 PF00271 Helicase conserved C-terminal domain N4T38_09340 PF03461 TRCF domain N4T38_09340 PF17757 UvrB interaction domain N4T38_09350 PF00211 Adenylate and Guanylate cyclase catalytic domain N4T38_09355 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T38_09360 PF00012 Hsp70 protein N4T38_09365 PF07743 HSCB C-terminal oligomerisation domain N4T38_09365 PF00226 DnaJ domain N4T38_09370 PF01521 Iron-sulphur cluster biosynthesis N4T38_09375 PF01592 NifU-like N terminal domain N4T38_09380 PF00266 Aminotransferase class-V N4T38_09385 PF02082 Transcriptional regulator N4T38_09400 PF00216 Bacterial DNA-binding protein N4T38_09405 PF00639 PPIC-type PPIASE domain N4T38_09405 PF09312 SurA N-terminal domain N4T38_09410 PF12852 Cupin N4T38_09410 PF12833 Helix-turn-helix domain N4T38_09415 PF00487 Fatty acid desaturase N4T38_09420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_09420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_09420 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_09425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_09425 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_09425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_09430 PF03109 ABC1 family N4T38_09440 PF04073 Aminoacyl-tRNA editing domain N4T38_09445 PF04183 IucA / IucC family N4T38_09445 PF06276 Ferric iron reductase FhuF-like transporter N4T38_09450 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) N4T38_09455 PF07690 Major Facilitator Superfamily N4T38_09460 PF06276 Ferric iron reductase FhuF-like transporter N4T38_09460 PF04183 IucA / IucC family N4T38_09465 PF04183 IucA / IucC family N4T38_09465 PF06276 Ferric iron reductase FhuF-like transporter N4T38_09475 PF03737 Aldolase/RraA N4T38_09480 PF00593 TonB dependent receptor N4T38_09480 PF07715 TonB-dependent Receptor Plug Domain N4T38_09505 PF13419 Haloacid dehalogenase-like hydrolase N4T38_09520 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase N4T38_09525 PF02277 Phosphoribosyltransferase N4T38_09530 PF00300 Histidine phosphatase superfamily (branch 1) N4T38_09540 PF02654 Cobalamin-5-phosphate synthase N4T38_09545 PF00793 DAHP synthetase I family N4T38_09550 PF01925 Sulfite exporter TauE/SafE N4T38_09570 PF07715 TonB-dependent Receptor Plug Domain N4T38_09570 PF00593 TonB dependent receptor N4T38_09575 PF02684 Lipid-A-disaccharide synthetase N4T38_09585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T38_09625 PF01230 HIT domain N4T38_09660 PF08241 Methyltransferase domain N4T38_09665 PF00561 alpha/beta hydrolase fold N4T38_09670 PF01053 Cys/Met metabolism PLP-dependent enzyme N4T38_09680 PF02575 YbaB/EbfC DNA-binding family N4T38_09685 PF02132 RecR protein N4T38_09685 PF13662 Toprim domain N4T38_09690 PF01612 3'-5' exonuclease N4T38_09690 PF00570 HRDC domain N4T38_09710 PF05166 YcgL domain N4T38_09720 PF17862 AAA+ lid domain N4T38_09720 PF00004 ATPase family associated with various cellular activities (AAA) N4T38_09720 PF01434 Peptidase family M41 N4T38_09730 PF00291 Pyridoxal-phosphate dependent enzyme N4T38_09735 PF05175 Methyltransferase small domain N4T38_09740 PF01264 Chorismate synthase N4T38_09745 PF08448 PAS fold N4T38_09745 PF00990 Diguanylate cyclase, GGDEF domain N4T38_09760 PF04055 Radical SAM superfamily N4T38_09765 PF00676 Dehydrogenase E1 component N4T38_09770 PF02779 Transketolase, pyrimidine binding domain N4T38_09770 PF02780 Transketolase, C-terminal domain N4T38_09775 PF02817 e3 binding domain N4T38_09775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N4T38_09775 PF00364 Biotin-requiring enzyme N4T38_09785 PF00106 short chain dehydrogenase N4T38_09790 PF00107 Zinc-binding dehydrogenase N4T38_09790 PF08240 Alcohol dehydrogenase GroES-like domain N4T38_09795 PF01062 Bestrophin, RFP-TM, chloride channel N4T38_09800 PF02954 Bacterial regulatory protein, Fis family N4T38_09800 PF00158 Sigma-54 interaction domain N4T38_09800 PF00072 Response regulator receiver domain N4T38_09805 PF04273 Putative phosphatase (DUF442) N4T38_09805 PF00753 Metallo-beta-lactamase superfamily N4T38_09820 PF01925 Sulfite exporter TauE/SafE N4T38_09835 PF12833 Helix-turn-helix domain N4T38_09835 PF06445 GyrI-like small molecule binding domain N4T38_09840 PF01638 HxlR-like helix-turn-helix N4T38_09845 PF02525 Flavodoxin-like fold N4T38_09855 PF00392 Bacterial regulatory proteins, gntR family N4T38_09855 PF07702 UTRA domain N4T38_09870 PF04069 Substrate binding domain of ABC-type glycine betaine transport system N4T38_09875 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_09880 PF00005 ABC transporter N4T38_09895 PF00665 Integrase core domain N4T38_09935 PF00175 Oxidoreductase NAD-binding domain N4T38_09935 PF00970 Oxidoreductase FAD-binding domain N4T38_09940 PF03358 NADPH-dependent FMN reductase N4T38_10000 PF01758 Sodium Bile acid symporter family N4T38_10010 PF03358 NADPH-dependent FMN reductase N4T38_10020 PF00239 Resolvase, N terminal domain N4T38_10020 PF02796 Helix-turn-helix domain of resolvase N4T38_10035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T38_10035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T38_10035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T38_10035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T38_10040 PF00809 Pterin binding enzyme N4T38_10050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N4T38_10050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N4T38_10055 PF02321 Outer membrane efflux protein N4T38_10060 PF00873 AcrB/AcrD/AcrF family N4T38_10065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T38_10075 PF00376 MerR family regulatory protein N4T38_10075 PF09278 MerR, DNA binding N4T38_10080 PF13007 Transposase C of IS166 homeodomain N4T38_10080 PF03050 Transposase IS66 family N4T38_10080 PF13817 IS66 C-terminal element N4T38_10080 PF13005 zinc-finger binding domain of transposase IS66 N4T38_10115 PF14461 Prokaryotic E2 family B N4T38_10115 PF00899 ThiF family N4T38_10135 PF00149 Calcineurin-like phosphoesterase N4T38_10150 PF00083 Sugar (and other) transporter N4T38_10155 PF07715 TonB-dependent Receptor Plug Domain N4T38_10155 PF00593 TonB dependent receptor N4T38_10160 PF00206 Lyase N4T38_10160 PF10415 Fumarase C C-terminus N4T38_10175 PF03466 LysR substrate binding domain N4T38_10175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_10180 PF03466 LysR substrate binding domain N4T38_10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_10185 PF02803 Thiolase, C-terminal domain N4T38_10185 PF00108 Thiolase, N-terminal domain N4T38_10190 PF02667 Short chain fatty acid transporter N4T38_10195 PF01144 Coenzyme A transferase N4T38_10200 PF01144 Coenzyme A transferase N4T38_10205 PF03466 LysR substrate binding domain N4T38_10205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_10215 PF00665 Integrase core domain N4T38_10215 PF13936 Helix-turn-helix domain N4T38_10230 PF00440 Bacterial regulatory proteins, tetR family N4T38_10235 PF13737 Transposase DDE domain N4T38_10255 PF06719 AraC-type transcriptional regulator N-terminus N4T38_10255 PF12833 Helix-turn-helix domain N4T38_10260 PF07690 Major Facilitator Superfamily N4T38_10265 PF01738 Dienelactone hydrolase family N4T38_10280 PF01613 Flavin reductase like domain N4T38_10290 PF14525 AraC-binding-like domain N4T38_10290 PF12833 Helix-turn-helix domain N4T38_10295 PF00175 Oxidoreductase NAD-binding domain N4T38_10295 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T38_10295 PF00970 Oxidoreductase FAD-binding domain N4T38_10300 PF00866 Ring hydroxylating beta subunit N4T38_10305 PF00848 Ring hydroxylating alpha subunit (catalytic domain) N4T38_10305 PF00355 Rieske [2Fe-2S] domain N4T38_10310 PF03459 TOBE domain N4T38_10310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_10320 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_10325 PF00005 ABC transporter N4T38_10325 PF03459 TOBE domain N4T38_10330 PF00106 short chain dehydrogenase N4T38_10335 PF00550 Phosphopantetheine attachment site N4T38_10335 PF00857 Isochorismatase family N4T38_10345 PF00149 Calcineurin-like phosphoesterase N4T38_10350 PF17941 Polyphosphate kinase C-terminal domain 1 N4T38_10350 PF13090 Polyphosphate kinase C-terminal domain 2 N4T38_10350 PF02503 Polyphosphate kinase middle domain N4T38_10350 PF13089 Polyphosphate kinase N-terminal domain N4T38_10355 PF08042 PqqA family N4T38_10360 PF12706 Beta-lactamase superfamily domain N4T38_10365 PF03070 TENA/THI-4/PQQC family N4T38_10370 PF05402 Coenzyme PQQ synthesis protein D (PqqD) N4T38_10375 PF04055 Radical SAM superfamily N4T38_10375 PF13186 Iron-sulfur cluster-binding domain N4T38_10380 PF01244 Membrane dipeptidase (Peptidase family M19) N4T38_10400 PF13091 PLD-like domain N4T38_10415 PF00199 Catalase N4T38_10425 PF00107 Zinc-binding dehydrogenase N4T38_10425 PF08240 Alcohol dehydrogenase GroES-like domain N4T38_10440 PF00577 Outer membrane usher protein N4T38_10440 PF13953 PapC C-terminal domain N4T38_10440 PF13954 PapC N-terminal domain N4T38_10445 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain N4T38_10445 PF02753 Pili assembly chaperone PapD, C-terminal domain N4T38_10460 PF00512 His Kinase A (phospho-acceptor) domain N4T38_10460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_10460 PF00672 HAMP domain N4T38_10460 PF16527 Two-component sensor protein CpxA, periplasmic domain N4T38_10480 PF07690 Major Facilitator Superfamily N4T38_10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_10495 PF02824 TGS domain N4T38_10495 PF13291 ACT domain N4T38_10495 PF04607 Region found in RelA / SpoT proteins N4T38_10505 PF01975 Survival protein SurE N4T38_10530 PF07690 Major Facilitator Superfamily N4T38_10540 PF13737 Transposase DDE domain N4T38_10550 PF00665 Integrase core domain N4T38_10550 PF13936 Helix-turn-helix domain N4T38_10560 PF00196 Bacterial regulatory proteins, luxR family N4T38_10590 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family N4T38_10595 PF14572 Phosphoribosyl synthetase-associated domain N4T38_10595 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N4T38_10615 PF00005 ABC transporter N4T38_10620 PF01032 FecCD transport family N4T38_10630 PF08240 Alcohol dehydrogenase GroES-like domain N4T38_10630 PF00107 Zinc-binding dehydrogenase N4T38_10635 PF12833 Helix-turn-helix domain N4T38_10635 PF06719 AraC-type transcriptional regulator N-terminus N4T38_10640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N4T38_10640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N4T38_10645 PF07690 Major Facilitator Superfamily N4T38_10650 PF01370 NAD dependent epimerase/dehydratase family N4T38_10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_10655 PF03466 LysR substrate binding domain N4T38_10665 PF00920 Dehydratase family N4T38_10670 PF00171 Aldehyde dehydrogenase family N4T38_10675 PF01047 MarR family N4T38_10680 PF01613 Flavin reductase like domain N4T38_10685 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T38_10710 PF00893 Small Multidrug Resistance protein N4T38_10720 PF01266 FAD dependent oxidoreductase N4T38_10725 PF12833 Helix-turn-helix domain N4T38_10725 PF00072 Response regulator receiver domain N4T38_10740 PF13533 Biotin-lipoyl like N4T38_10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_10755 PF03466 LysR substrate binding domain N4T38_10765 PF08450 SMP-30/Gluconolactonase/LRE-like region N4T38_10770 PF07702 UTRA domain N4T38_10770 PF00392 Bacterial regulatory proteins, gntR family N4T38_10780 PF04909 Amidohydrolase N4T38_10835 PF00106 short chain dehydrogenase N4T38_10850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_10850 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_10850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_10855 PF03466 LysR substrate binding domain N4T38_10860 PF09339 IclR helix-turn-helix domain N4T38_10860 PF01614 Bacterial transcriptional regulator N4T38_10865 PF00753 Metallo-beta-lactamase superfamily N4T38_10875 PF04143 Sulphur transport N4T38_10880 PF13340 Putative transposase of IS4/5 family (DUF4096) N4T38_10890 PF01011 PQQ enzyme repeat N4T38_10890 PF13360 PQQ-like domain N4T38_10895 PF04966 Carbohydrate-selective porin, OprB family N4T38_10900 PF05048 Periplasmic copper-binding protein (NosD) N4T38_10905 PF01487 Type I 3-dehydroquinase N4T38_10910 PF00775 Dioxygenase N4T38_10915 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal N4T38_10915 PF00775 Dioxygenase N4T38_10920 PF02627 Carboxymuconolactone decarboxylase family N4T38_10925 PF07690 Major Facilitator Superfamily N4T38_10930 PF00561 alpha/beta hydrolase fold N4T38_10935 PF10397 Adenylosuccinate lyase C-terminus N4T38_10935 PF00206 Lyase N4T38_10940 PF02803 Thiolase, C-terminal domain N4T38_10940 PF00108 Thiolase, N-terminal domain N4T38_10945 PF01144 Coenzyme A transferase N4T38_10950 PF01144 Coenzyme A transferase N4T38_10955 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N4T38_10960 PF04977 Septum formation initiator N4T38_10965 PF04239 Protein of unknown function (DUF421) N4T38_10970 PF00113 Enolase, C-terminal TIM barrel domain N4T38_10970 PF03952 Enolase, N-terminal domain N4T38_10975 PF00793 DAHP synthetase I family N4T38_10980 PF06418 CTP synthase N-terminus N4T38_10980 PF00117 Glutamine amidotransferase class-I N4T38_11010 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_11010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T38_11025 PF00793 DAHP synthetase I family N4T38_11030 PF02694 Uncharacterised BCR, YnfA/UPF0060 family N4T38_11035 PF10431 C-terminal, D2-small domain, of ClpB protein N4T38_11035 PF02861 Clp amino terminal domain, pathogenicity island component N4T38_11035 PF17871 AAA lid domain N4T38_11035 PF07724 AAA domain (Cdc48 subfamily) N4T38_11035 PF00004 ATPase family associated with various cellular activities (AAA) N4T38_11040 PF02617 ATP-dependent Clp protease adaptor protein ClpS N4T38_11050 PF02774 Semialdehyde dehydrogenase, dimerisation domain N4T38_11050 PF01118 Semialdehyde dehydrogenase, NAD binding domain N4T38_11075 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N4T38_11080 PF00291 Pyridoxal-phosphate dependent enzyme N4T38_11080 PF00585 C-terminal regulatory domain of Threonine dehydratase N4T38_11085 PF02080 TrkA-C domain N4T38_11085 PF02254 TrkA-N domain N4T38_11090 PF02386 Cation transport protein N4T38_11095 PF02253 Phospholipase A1 N4T38_11100 PF08367 Peptidase M16C associated N4T38_11100 PF00675 Insulinase (Peptidase family M16) N4T38_11100 PF05193 Peptidase M16 inactive domain N4T38_11105 PF07715 TonB-dependent Receptor Plug Domain N4T38_11105 PF00593 TonB dependent receptor N4T38_11115 PF00294 pfkB family carbohydrate kinase N4T38_11125 PF07290 Protein of unknown function (DUF1449) N4T38_11140 PF01654 Cytochrome bd terminal oxidase subunit I N4T38_11145 PF02322 Cytochrome bd terminal oxidase subunit II N4T38_11150 PF08173 Membrane bound YbgT-like protein N4T38_11165 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N4T38_11175 PF00448 SRP54-type protein, GTPase domain N4T38_11175 PF02881 SRP54-type protein, helical bundle domain N4T38_11200 PF00571 CBS domain N4T38_11200 PF00478 IMP dehydrogenase / GMP reductase domain N4T38_11205 PF00202 Aminotransferase class-III N4T38_11210 PF00462 Glutaredoxin N4T38_11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_11220 PF03466 LysR substrate binding domain N4T38_11225 PF00557 Metallopeptidase family M24 N4T38_11230 PF05525 Branched-chain amino acid transport protein N4T38_11255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N4T38_11255 PF00381 PTS HPr component phosphorylation site N4T38_11255 PF00391 PEP-utilising enzyme, mobile domain N4T38_11255 PF05524 PEP-utilising enzyme, N-terminal N4T38_11255 PF02896 PEP-utilising enzyme, TIM barrel domain N4T38_11260 PF00294 pfkB family carbohydrate kinase N4T38_11265 PF02378 Phosphotransferase system, EIIC N4T38_11265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N4T38_11285 PF00563 EAL domain N4T38_11285 PF00990 Diguanylate cyclase, GGDEF domain N4T38_11285 PF03707 Bacterial signalling protein N terminal repeat N4T38_11295 PF07995 Glucose / Sorbosone dehydrogenase N4T38_11300 PF02586 SOS response associated peptidase (SRAP) N4T38_11305 PF00916 Sulfate permease family N4T38_11305 PF01740 STAS domain N4T38_11310 PF05922 Peptidase inhibitor I9 N4T38_11310 PF00082 Subtilase family N4T38_11325 PF00324 Amino acid permease N4T38_11330 PF00266 Aminotransferase class-V N4T38_11335 PF01037 Lrp/AsnC ligand binding domain N4T38_11360 PF13419 Haloacid dehalogenase-like hydrolase N4T38_11365 PF01479 S4 domain N4T38_11370 PF00154 recA bacterial DNA recombination protein N4T38_11375 PF02631 RecX family N4T38_11390 PF00132 Bacterial transferase hexapeptide (six repeats) N4T38_11390 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 N4T38_11395 PF07977 FabA-like domain N4T38_11400 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N4T38_11400 PF00132 Bacterial transferase hexapeptide (six repeats) N4T38_11410 PF07244 Surface antigen variable number repeat N4T38_11410 PF01103 Surface antigen N4T38_11415 PF13180 PDZ domain N4T38_11415 PF17820 PDZ domain N4T38_11415 PF02163 Peptidase family M50 N4T38_11420 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N4T38_11420 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N4T38_11420 PF13288 DXP reductoisomerase C-terminal domain N4T38_11430 PF01255 Putative undecaprenyl diphosphate synthase N4T38_11435 PF01765 Ribosome recycling factor N4T38_11440 PF00696 Amino acid kinase family N4T38_11445 PF04055 Radical SAM superfamily N4T38_11445 PF18693 TRAM domain N4T38_11445 PF00919 Uncharacterized protein family UPF0004 N4T38_11455 PF00512 His Kinase A (phospho-acceptor) domain N4T38_11455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_11455 PF00989 PAS fold N4T38_11460 PF00072 Response regulator receiver domain N4T38_11460 PF00158 Sigma-54 interaction domain N4T38_11460 PF02954 Bacterial regulatory protein, Fis family N4T38_11465 PF00440 Bacterial regulatory proteins, tetR family N4T38_11470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N4T38_11470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N4T38_11480 PF02542 YgbB family N4T38_11490 PF01266 FAD dependent oxidoreductase N4T38_11510 PF00206 Lyase N4T38_11510 PF10415 Fumarase C C-terminus N4T38_11515 PF16363 GDP-mannose 4,6 dehydratase N4T38_11520 PF02635 DsrE/DsrF-like family N4T38_11540 PF00892 EamA-like transporter family N4T38_11545 PF00392 Bacterial regulatory proteins, gntR family N4T38_11545 PF00155 Aminotransferase class I and II N4T38_11550 PF01638 HxlR-like helix-turn-helix N4T38_11555 PF00994 Probable molybdopterin binding domain N4T38_11555 PF03454 MoeA C-terminal region (domain IV) N4T38_11555 PF03453 MoeA N-terminal region (domain I and II) N4T38_11560 PF01967 MoaC family N4T38_11560 PF00994 Probable molybdopterin binding domain N4T38_11565 PF02391 MoaE protein N4T38_11575 PF06463 Molybdenum Cofactor Synthesis C N4T38_11575 PF04055 Radical SAM superfamily N4T38_11580 PF00384 Molybdopterin oxidoreductase N4T38_11580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N4T38_11580 PF01568 Molydopterin dinucleotide binding domain N4T38_11585 PF12804 MobA-like NTP transferase domain N4T38_11590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N4T38_11590 PF04324 BFD-like [2Fe-2S] binding domain N4T38_11590 PF00384 Molybdopterin oxidoreductase N4T38_11590 PF01568 Molydopterin dinucleotide binding domain N4T38_11595 PF18267 Rubredoxin NAD+ reductase C-terminal domain N4T38_11595 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_11595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N4T38_11595 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N4T38_11595 PF04324 BFD-like [2Fe-2S] binding domain N4T38_11600 PF04324 BFD-like [2Fe-2S] binding domain N4T38_11600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N4T38_11600 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N4T38_11600 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_11600 PF13806 Rieske-like [2Fe-2S] domain N4T38_11600 PF18267 Rubredoxin NAD+ reductase C-terminal domain N4T38_11610 PF00486 Transcriptional regulatory protein, C terminal N4T38_11610 PF00072 Response regulator receiver domain N4T38_11615 PF00005 ABC transporter N4T38_11620 PF11799 impB/mucB/samB family C-terminal domain N4T38_11620 PF00817 impB/mucB/samB family N4T38_11620 PF13438 Domain of unknown function (DUF4113) N4T38_11625 PF01220 Dehydroquinase class II N4T38_11630 PF00364 Biotin-requiring enzyme N4T38_11635 PF02785 Biotin carboxylase C-terminal domain N4T38_11635 PF00289 Biotin carboxylase, N-terminal domain N4T38_11635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T38_11645 PF12832 MFS_1 like family N4T38_11665 PF01645 Conserved region in glutamate synthase N4T38_11680 PF01565 FAD binding domain N4T38_11680 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N4T38_11685 PF01451 Low molecular weight phosphotyrosine protein phosphatase N4T38_11695 PF00465 Iron-containing alcohol dehydrogenase N4T38_11700 PF03061 Thioesterase superfamily N4T38_11705 PF05506 Domain of unknown function (DUF756) N4T38_11705 PF04185 Phosphoesterase family N4T38_11710 PF12170 DNA polymerase III tau subunit V interacting with alpha N4T38_11710 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding N4T38_11710 PF12169 DNA polymerase III subunits gamma and tau domain III N4T38_11715 PF07690 Major Facilitator Superfamily N4T38_11725 PF00144 Beta-lactamase N4T38_11730 PF01575 MaoC like domain N4T38_11740 PF02803 Thiolase, C-terminal domain N4T38_11740 PF00108 Thiolase, N-terminal domain N4T38_11750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_11750 PF03466 LysR substrate binding domain N4T38_11755 PF00923 Transaldolase/Fructose-6-phosphate aldolase N4T38_11760 PF01810 LysE type translocator N4T38_11765 PF01037 Lrp/AsnC ligand binding domain N4T38_11770 PF03594 Benzoate membrane transport protein N4T38_11775 PF02308 MgtC family N4T38_11810 PF00582 Universal stress protein family N4T38_11815 PF00005 ABC transporter N4T38_11815 PF12848 ABC transporter N4T38_11835 PF00593 TonB dependent receptor N4T38_11835 PF07715 TonB-dependent Receptor Plug Domain N4T38_11865 PF00924 Mechanosensitive ion channel N4T38_11870 PF00593 TonB dependent receptor N4T38_11870 PF07715 TonB-dependent Receptor Plug Domain N4T38_11875 PF00440 Bacterial regulatory proteins, tetR family N4T38_11890 PF01037 Lrp/AsnC ligand binding domain N4T38_11895 PF01817 Chorismate mutase type II N4T38_11915 PF01433 Peptidase family M1 domain N4T38_11915 PF17432 Domain of unknown function (DUF3458_C) ARM repeats N4T38_11915 PF11940 Domain of unknown function (DUF3458) Ig-like fold N4T38_11930 PF02110 Hydroxyethylthiazole kinase family N4T38_11940 PF05970 PIF1-like helicase N4T38_11940 PF14493 Helix-turn-helix domain N4T38_11945 PF00465 Iron-containing alcohol dehydrogenase N4T38_11960 PF00171 Aldehyde dehydrogenase family N4T38_11965 PF13520 Amino acid permease N4T38_11970 PF06751 Ethanolamine ammonia lyase large subunit (EutB) N4T38_11975 PF05985 Ethanolamine ammonia-lyase light chain (EutC) N4T38_11980 PF00117 Glutamine amidotransferase class-I N4T38_11980 PF00958 GMP synthase C terminal domain N4T38_11980 PF02540 NAD synthase N4T38_11985 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4T38_11985 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain N4T38_11990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N4T38_11995 PF00149 Calcineurin-like phosphoesterase N4T38_12005 PF00881 Nitroreductase family N4T38_12015 PF17209 Hfq protein N4T38_12025 PF08676 MutL C terminal dimerisation domain N4T38_12025 PF01119 DNA mismatch repair protein, C-terminal domain N4T38_12030 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE N4T38_12035 PF00849 RNA pseudouridylate synthase N4T38_12035 PF01479 S4 domain N4T38_12050 PF00849 RNA pseudouridylate synthase N4T38_12050 PF01479 S4 domain N4T38_12060 PF04284 Protein of unknown function (DUF441) N4T38_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_12065 PF03466 LysR substrate binding domain N4T38_12080 PF07690 Major Facilitator Superfamily N4T38_12085 PF00027 Cyclic nucleotide-binding domain N4T38_12085 PF00520 Ion transport protein N4T38_12095 PF11791 Aconitate B N-terminal domain N4T38_12095 PF06434 Aconitate hydratase 2 N-terminus N4T38_12095 PF00330 Aconitase family (aconitate hydratase) N4T38_12105 PF00717 Peptidase S24-like N4T38_12110 PF13438 Domain of unknown function (DUF4113) N4T38_12110 PF00817 impB/mucB/samB family N4T38_12110 PF11799 impB/mucB/samB family C-terminal domain N4T38_12110 PF11798 IMS family HHH motif N4T38_12165 PF13936 Helix-turn-helix domain N4T38_12165 PF00665 Integrase core domain N4T38_12185 PF13005 zinc-finger binding domain of transposase IS66 N4T38_12185 PF13007 Transposase C of IS166 homeodomain N4T38_12185 PF13817 IS66 C-terminal element N4T38_12185 PF03050 Transposase IS66 family N4T38_12215 PF00712 DNA polymerase III beta subunit, N-terminal domain N4T38_12215 PF02767 DNA polymerase III beta subunit, central domain N4T38_12215 PF02768 DNA polymerase III beta subunit, C-terminal domain N4T38_12255 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N4T38_12475 PF01695 IstB-like ATP binding protein N4T38_12485 PF00145 C-5 cytosine-specific DNA methylase N4T38_12570 PF00929 Exonuclease N4T38_12610 PF01103 Surface antigen N4T38_12610 PF07244 Surface antigen variable number repeat N4T38_12610 PF17243 POTRA domain TamA domain 1 N4T38_12615 PF07690 Major Facilitator Superfamily N4T38_12620 PF03232 Ubiquinone biosynthesis protein COQ7 N4T38_12630 PF00120 Glutamine synthetase, catalytic domain N4T38_12635 PF00072 Response regulator receiver domain N4T38_12635 PF00486 Transcriptional regulatory protein, C terminal N4T38_12640 PF13493 Domain of unknown function (DUF4118) N4T38_12640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_12640 PF02702 Osmosensitive K+ channel His kinase sensor domain N4T38_12640 PF00512 His Kinase A (phospho-acceptor) domain N4T38_12645 PF02669 K+-transporting ATPase, c chain N4T38_12655 PF03814 Potassium-transporting ATPase A subunit N4T38_12670 PF03109 ABC1 family N4T38_12675 PF00899 ThiF family N4T38_12680 PF01613 Flavin reductase like domain N4T38_12685 PF13193 AMP-binding enzyme C-terminal domain N4T38_12685 PF00501 AMP-binding enzyme N4T38_12690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_12690 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_12690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_12695 PF00106 short chain dehydrogenase N4T38_12700 PF12833 Helix-turn-helix domain N4T38_12705 PF17827 PrmC N-terminal domain N4T38_12705 PF13847 Methyltransferase domain N4T38_12710 PF00472 RF-1 domain N4T38_12710 PF03462 PCRF domain N4T38_12720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_12720 PF03466 LysR substrate binding domain N4T38_12735 PF00296 Luciferase-like monooxygenase N4T38_12745 PF13994 PgaD-like protein N4T38_12750 PF00535 Glycosyl transferase family 2 N4T38_12755 PF01522 Polysaccharide deacetylase N4T38_12755 PF14883 Hypothetical glycosyl hydrolase family 13 N4T38_12765 PF03618 Kinase/pyrophosphorylase N4T38_12770 PF00391 PEP-utilising enzyme, mobile domain N4T38_12770 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain N4T38_12770 PF02896 PEP-utilising enzyme, TIM barrel domain N4T38_12780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain N4T38_12780 PF06481 COX Aromatic Rich Motif N4T38_12785 PF00115 Cytochrome C and Quinol oxidase polypeptide I N4T38_12790 PF00510 Cytochrome c oxidase subunit III N4T38_12795 PF03626 Prokaryotic Cytochrome C oxidase subunit IV N4T38_12800 PF01040 UbiA prenyltransferase family N4T38_12805 PF01250 Ribosomal protein S6 N4T38_12810 PF01084 Ribosomal protein S18 N4T38_12815 PF01281 Ribosomal protein L9, N-terminal domain N4T38_12815 PF03948 Ribosomal protein L9, C-terminal domain N4T38_12820 PF00772 DnaB-like helicase N terminal domain N4T38_12820 PF03796 DnaB-like helicase C terminal domain N4T38_12825 PF00842 Alanine racemase, C-terminal domain N4T38_12825 PF01168 Alanine racemase, N-terminal domain N4T38_12835 PF01841 Transglutaminase-like superfamily N4T38_12835 PF08379 Bacterial transglutaminase-like N-terminal region N4T38_12845 PF14403 Circularly permuted ATP-grasp type 2 N4T38_12855 PF01134 Glucose inhibited division protein A N4T38_12855 PF13932 GidA associated domain N4T38_12875 PF02954 Bacterial regulatory protein, Fis family N4T38_12880 PF01808 AICARFT/IMPCHase bienzyme N4T38_12880 PF02142 MGS-like domain N4T38_12885 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N4T38_12885 PF02843 Phosphoribosylglycinamide synthetase, C domain N4T38_12885 PF02844 Phosphoribosylglycinamide synthetase, N domain N4T38_12890 PF03180 NLPA lipoprotein N4T38_12895 PF00005 ABC transporter N4T38_12895 PF09383 NIL domain N4T38_12900 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_12905 PF00753 Metallo-beta-lactamase superfamily N4T38_12905 PF16123 Hydroxyacylglutathione hydrolase C-terminus N4T38_12915 PF00375 Sodium:dicarboxylate symporter family N4T38_12935 PF07995 Glucose / Sorbosone dehydrogenase N4T38_12940 PF13737 Transposase DDE domain N4T38_12945 PF00892 EamA-like transporter family N4T38_12950 PF01177 Asp/Glu/Hydantoin racemase N4T38_12960 PF02470 MlaD protein N4T38_12965 PF04403 Paraquat-inducible protein A N4T38_12975 PF06826 Predicted Permease Membrane Region N4T38_12975 PF02080 TrkA-C domain N4T38_12980 PF00155 Aminotransferase class I and II N4T38_12990 PF13936 Helix-turn-helix domain N4T38_12990 PF00665 Integrase core domain N4T38_13010 PF00083 Sugar (and other) transporter N4T38_13010 PF08946 Osmosensory transporter coiled coil N4T38_13060 PF00392 Bacterial regulatory proteins, gntR family N4T38_13060 PF07729 FCD domain N4T38_13070 PF03616 Sodium/glutamate symporter N4T38_13075 PF00561 alpha/beta hydrolase fold N4T38_13100 PF04076 Bacterial OB fold (BOF) protein N4T38_13130 PF00324 Amino acid permease N4T38_13135 PF00171 Aldehyde dehydrogenase family N4T38_13140 PF00202 Aminotransferase class-III N4T38_13145 PF03466 LysR substrate binding domain N4T38_13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_13180 PF13332 Hemagglutinin repeat N4T38_13180 PF04829 Pre-toxin domain with VENN motif N4T38_13180 PF13018 Extended Signal Peptide of Type V secretion system N4T38_13180 PF13332 Hemagglutinin repeat N4T38_13180 PF05860 haemagglutination activity domain N4T38_13180 PF04829 Pre-toxin domain with VENN motif N4T38_13180 PF13018 Extended Signal Peptide of Type V secretion system N4T38_13180 PF05860 haemagglutination activity domain N4T38_13185 PF08479 POTRA domain, ShlB-type N4T38_13185 PF17287 POTRA domain N4T38_13185 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB N4T38_13210 PF00069 Protein kinase domain N4T38_13230 PF00814 Glycoprotease family N4T38_13235 PF01165 Ribosomal protein S21 N4T38_13240 PF09424 Yqey-like protein N4T38_13245 PF01435 Peptidase family M48 N4T38_13250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4T38_13250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4T38_13265 PF00156 Phosphoribosyl transferase domain N4T38_13270 PF02674 Colicin V production protein N4T38_13275 PF01180 Dihydroorotate dehydrogenase N4T38_13295 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N4T38_13295 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N4T38_13300 PF00881 Nitroreductase family N4T38_13310 PF00271 Helicase conserved C-terminal domain N4T38_13310 PF00270 DEAD/DEAH box helicase N4T38_13315 PF00313 'Cold-shock' DNA-binding domain N4T38_13330 PF04545 Sigma-70, region 4 N4T38_13330 PF00140 Sigma-70 factor, region 1.2 N4T38_13330 PF04542 Sigma-70 region 2 N4T38_13335 PF04241 Protein of unknown function (DUF423) N4T38_13345 PF05690 Thiazole biosynthesis protein ThiG N4T38_13355 PF03883 Peroxide stress protein YaaA N4T38_13365 PF00753 Metallo-beta-lactamase superfamily N4T38_13370 PF07687 Peptidase dimerisation domain N4T38_13370 PF01546 Peptidase family M20/M25/M40 N4T38_13380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N4T38_13385 PF00800 Prephenate dehydratase N4T38_13385 PF01842 ACT domain N4T38_13385 PF01817 Chorismate mutase type II N4T38_13390 PF00756 Putative esterase N4T38_13395 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_13395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_13395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_13400 PF00375 Sodium:dicarboxylate symporter family N4T38_13405 PF02885 Glycosyl transferase family, helical bundle domain N4T38_13405 PF00591 Glycosyl transferase family, a/b domain N4T38_13410 PF07023 Protein of unknown function (DUF1315) N4T38_13415 PF01513 ATP-NAD kinase N4T38_13420 PF00912 Transglycosylase N4T38_13420 PF00905 Penicillin binding protein transpeptidase domain N4T38_13420 PF14814 Bifunctional transglycosylase second domain N4T38_13430 PF00293 NUDIX domain N4T38_13440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_13440 PF08521 Two-component sensor kinase N-terminal N4T38_13440 PF00512 His Kinase A (phospho-acceptor) domain N4T38_13445 PF00072 Response regulator receiver domain N4T38_13445 PF00486 Transcriptional regulatory protein, C terminal N4T38_13455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N4T38_13455 PF00437 Type II/IV secretion system protein N4T38_13465 PF18389 TrmO C-terminal domain N4T38_13465 PF01980 tRNA-methyltransferase O N4T38_13470 PF00175 Oxidoreductase NAD-binding domain N4T38_13470 PF00970 Oxidoreductase FAD-binding domain N4T38_13475 PF02567 Phenazine biosynthesis-like protein N4T38_13480 PF00392 Bacterial regulatory proteins, gntR family N4T38_13480 PF00155 Aminotransferase class I and II N4T38_13485 PF01136 Peptidase family U32 N4T38_13485 PF16325 Peptidase family U32 C-terminal domain N4T38_13490 PF00037 4Fe-4S binding domain N4T38_13495 PF00893 Small Multidrug Resistance protein N4T38_13500 PF00005 ABC transporter N4T38_13505 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_13510 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_13515 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T38_13535 PF13533 Biotin-lipoyl like N4T38_13540 PF00873 AcrB/AcrD/AcrF family N4T38_13545 PF02321 Outer membrane efflux protein N4T38_13550 PF00464 Serine hydroxymethyltransferase N4T38_13655 PF01476 LysM domain N4T38_13655 PF08525 Opacity-associated protein A N-terminal motif N4T38_13655 PF01551 Peptidase family M23 N4T38_13865 PF03796 DnaB-like helicase C terminal domain N4T38_13865 PF14528 LAGLIDADG-like domain N4T38_13865 PF00772 DnaB-like helicase N terminal domain N4T38_13970 PF00589 Phage integrase family N4T38_13975 PF00005 ABC transporter N4T38_13980 PF01061 ABC-2 type transporter N4T38_13985 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term N4T38_13985 PF14489 QueF-like protein N4T38_13995 PF01098 Cell cycle protein N4T38_14000 PF13406 Transglycosylase SLT domain N4T38_14005 PF05036 Sporulation related domain N4T38_14005 PF03330 Lytic transglycolase N4T38_14025 PF12833 Helix-turn-helix domain N4T38_14035 PF00889 Elongation factor TS N4T38_14040 PF00318 Ribosomal protein S2 N4T38_14045 PF00557 Metallopeptidase family M24 N4T38_14055 PF07690 Major Facilitator Superfamily N4T38_14065 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_14065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T38_14070 PF04055 Radical SAM superfamily N4T38_14075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_14075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_14075 PF09317 Domain of unknown function (DUF1974) N4T38_14090 PF05221 S-adenosyl-L-homocysteine hydrolase N4T38_14090 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain N4T38_14095 PF02219 Methylenetetrahydrofolate reductase N4T38_14100 PF04452 RNA methyltransferase N4T38_14110 PF13737 Transposase DDE domain N4T38_14120 PF01515 Phosphate acetyl/butaryl transferase N4T38_14120 PF00390 Malic enzyme, N-terminal domain N4T38_14120 PF03949 Malic enzyme, NAD binding domain N4T38_14125 PF01743 Poly A polymerase head domain N4T38_14125 PF12627 Probable RNA and SrmB- binding site of polymerase A N4T38_14130 PF13180 PDZ domain N4T38_14135 PF01784 NIF3 (NGG1p interacting factor 3) N4T38_14140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N4T38_14140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N4T38_14175 PF01040 UbiA prenyltransferase family N4T38_14180 PF04345 Chorismate lyase N4T38_14185 PF00120 Glutamine synthetase, catalytic domain N4T38_14185 PF03951 Glutamine synthetase, beta-Grasp domain N4T38_14190 PF00854 POT family N4T38_14200 PF13356 Arm DNA-binding domain N4T38_14200 PF00589 Phage integrase family N4T38_14275 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system N4T38_14570 PF00117 Glutamine amidotransferase class-I N4T38_14575 PF01433 Peptidase family M1 domain N4T38_14575 PF11838 ERAP1-like C-terminal domain N4T38_14580 PF00593 TonB dependent receptor N4T38_14580 PF07715 TonB-dependent Receptor Plug Domain N4T38_14585 PF00591 Glycosyl transferase family, a/b domain N4T38_14585 PF02885 Glycosyl transferase family, helical bundle domain N4T38_14590 PF00218 Indole-3-glycerol phosphate synthase N4T38_14605 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain N4T38_14605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase N4T38_14610 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T38_14610 PF01799 [2Fe-2S] binding domain N4T38_14615 PF01227 GTP cyclohydrolase I N4T38_14625 PF00144 Beta-lactamase N4T38_14640 PF05675 Protein of unknown function (DUF817) N4T38_14645 PF01208 Uroporphyrinogen decarboxylase (URO-D) N4T38_14655 PF00425 chorismate binding enzyme N4T38_14665 PF00975 Thioesterase domain N4T38_14670 PF00005 ABC transporter N4T38_14675 PF00664 ABC transporter transmembrane region N4T38_14675 PF00005 ABC transporter N4T38_14680 PF00282 Pyridoxal-dependent decarboxylase conserved domain N4T38_14685 PF00550 Phosphopantetheine attachment site N4T38_14685 PF00857 Isochorismatase family N4T38_14690 PF13193 AMP-binding enzyme C-terminal domain N4T38_14690 PF00501 AMP-binding enzyme N4T38_14695 PF00550 Phosphopantetheine attachment site N4T38_14695 PF00668 Condensation domain N4T38_14695 PF00501 AMP-binding enzyme N4T38_14700 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) N4T38_14705 PF07715 TonB-dependent Receptor Plug Domain N4T38_14705 PF00593 TonB dependent receptor N4T38_14710 PF01497 Periplasmic binding protein N4T38_14715 PF00005 ABC transporter N4T38_14720 PF01032 FecCD transport family N4T38_14725 PF01032 FecCD transport family N4T38_14730 PF00501 AMP-binding enzyme N4T38_14730 PF13193 AMP-binding enzyme C-terminal domain N4T38_14730 PF00668 Condensation domain N4T38_14730 PF00550 Phosphopantetheine attachment site N4T38_14730 PF00975 Thioesterase domain N4T38_14735 PF00550 Phosphopantetheine attachment site N4T38_14735 PF00668 Condensation domain N4T38_14735 PF13193 AMP-binding enzyme C-terminal domain N4T38_14735 PF00501 AMP-binding enzyme N4T38_14745 PF13309 HTH domain N4T38_14745 PF08348 YheO-like PAS domain N4T38_14750 PF00291 Pyridoxal-phosphate dependent enzyme N4T38_14755 PF02678 Pirin N4T38_14755 PF17954 Quercetinase C-terminal cupin domain N4T38_14775 PF04328 Selenoprotein, putative N4T38_14780 PF02554 Carbon starvation protein CstA N4T38_14780 PF13722 5TM C-terminal transporter carbon starvation CstA N4T38_14785 PF01132 Elongation factor P (EF-P) OB domain N4T38_14785 PF08207 Elongation factor P (EF-P) KOW-like domain N4T38_14785 PF09285 Elongation factor P, C-terminal N4T38_14790 PF04055 Radical SAM superfamily N4T38_14800 PF12792 CSS motif domain associated with EAL N4T38_14800 PF00563 EAL domain N4T38_14805 PF01197 Ribosomal protein L31 N4T38_14810 PF13593 SBF-like CPA transporter family (DUF4137) N4T38_14815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T38_14820 PF07690 Major Facilitator Superfamily N4T38_14825 PF05362 Lon protease (S16) C-terminal proteolytic domain N4T38_14825 PF13654 AAA domain N4T38_14830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_14830 PF03466 LysR substrate binding domain N4T38_14835 PF01476 LysM domain N4T38_14835 PF01551 Peptidase family M23 N4T38_14840 PF01975 Survival protein SurE N4T38_14855 PF00768 D-alanyl-D-alanine carboxypeptidase N4T38_14855 PF07943 Penicillin-binding protein 5, C-terminal domain N4T38_14860 PF00132 Bacterial transferase hexapeptide (six repeats) N4T38_14865 PF13344 Haloacid dehalogenase-like hydrolase N4T38_14865 PF00293 NUDIX domain N4T38_14875 PF04356 Protein of unknown function (DUF489) N4T38_14880 PF08328 Adenylosuccinate lyase C-terminal N4T38_14880 PF00206 Lyase N4T38_14895 PF01343 Peptidase family S49 N4T38_14895 PF08496 Peptidase family S49 N-terminal N4T38_14900 PF00005 ABC transporter N4T38_14905 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_14910 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_14915 PF12849 PBP superfamily domain N4T38_14920 PF00324 Amino acid permease N4T38_14925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4T38_14925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4T38_14925 PF00205 Thiamine pyrophosphate enzyme, central domain N4T38_14930 PF01037 Lrp/AsnC ligand binding domain N4T38_14935 PF00171 Aldehyde dehydrogenase family N4T38_14940 PF00282 Pyridoxal-dependent decarboxylase conserved domain N4T38_14945 PF00202 Aminotransferase class-III N4T38_14955 PF00440 Bacterial regulatory proteins, tetR family N4T38_14955 PF17754 MftR C-terminal domain N4T38_14965 PF00487 Fatty acid desaturase N4T38_14970 PF00970 Oxidoreductase FAD-binding domain N4T38_14970 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T38_14970 PF00175 Oxidoreductase NAD-binding domain N4T38_14975 PF00440 Bacterial regulatory proteins, tetR family N4T38_14985 PF00271 Helicase conserved C-terminal domain N4T38_14985 PF12137 RNA polymerase recycling family C-terminal N4T38_14985 PF00176 SNF2 family N-terminal domain N4T38_14985 PF18339 RapA N-terminal Tudor like domain 1 N4T38_14985 PF18337 RapA N-terminal Tudor like domain N4T38_14990 PF00849 RNA pseudouridylate synthase N4T38_15000 PF00202 Aminotransferase class-III N4T38_15005 PF02581 Thiamine monophosphate synthase N4T38_15030 PF05193 Peptidase M16 inactive domain N4T38_15030 PF00675 Insulinase (Peptidase family M16) N4T38_15035 PF02567 Phenazine biosynthesis-like protein N4T38_15040 PF00375 Sodium:dicarboxylate symporter family N4T38_15045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_15045 PF03466 LysR substrate binding domain N4T38_15050 PF06779 Uncharacterised MFS-type transporter YbfB N4T38_15070 PF00180 Isocitrate/isopropylmalate dehydrogenase N4T38_15075 PF00849 RNA pseudouridylate synthase N4T38_15080 PF03971 Monomeric isocitrate dehydrogenase N4T38_15090 PF00768 D-alanyl-D-alanine carboxypeptidase N4T38_15090 PF07943 Penicillin-binding protein 5, C-terminal domain N4T38_15095 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_15100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T38_15105 PF00875 DNA photolyase N4T38_15105 PF03441 FAD binding domain of DNA photolyase N4T38_15135 PF02350 UDP-N-acetylglucosamine 2-epimerase N4T38_15150 PF03060 Nitronate monooxygenase N4T38_15155 PF01207 Dihydrouridine synthase (Dus) N4T38_15160 PF07759 Protein of unknown function (DUF1615) N4T38_15170 PF00696 Amino acid kinase family N4T38_15170 PF01472 PUA domain N4T38_15175 PF01018 GTP1/OBG N4T38_15175 PF01926 50S ribosome-binding GTPase N4T38_15190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N4T38_15190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N4T38_15195 PF00892 EamA-like transporter family N4T38_15205 PF00271 Helicase conserved C-terminal domain N4T38_15205 PF04851 Type III restriction enzyme, res subunit N4T38_15205 PF02151 UvrB/uvrC motif N4T38_15205 PF12344 Ultra-violet resistance protein B N4T38_15205 PF17757 UvrB interaction domain N4T38_15215 PF00665 Integrase core domain N4T38_15215 PF13936 Helix-turn-helix domain N4T38_15220 PF17151 Periplasmic sensor domain N4T38_15220 PF00990 Diguanylate cyclase, GGDEF domain N4T38_15230 PF00155 Aminotransferase class I and II N4T38_15270 PF00106 short chain dehydrogenase N4T38_15275 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) N4T38_15280 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ N4T38_15285 PF02565 Recombination protein O C terminal N4T38_15285 PF11967 Recombination protein O N terminal N4T38_15295 PF01926 50S ribosome-binding GTPase N4T38_15295 PF07650 KH domain N4T38_15300 PF14622 Ribonuclease-III-like N4T38_15300 PF00035 Double-stranded RNA binding motif N4T38_15310 PF10502 Signal peptidase, peptidase S26 N4T38_15315 PF06421 GTP-binding protein LepA C-terminus N4T38_15315 PF00679 Elongation factor G C-terminus N4T38_15315 PF00009 Elongation factor Tu GTP binding domain N4T38_15315 PF03144 Elongation factor Tu domain 2 N4T38_15325 PF13180 PDZ domain N4T38_15330 PF00890 FAD binding domain N4T38_15330 PF02910 Fumarate reductase flavoprotein C-term N4T38_15340 PF02223 Thymidylate kinase N4T38_15345 PF02618 YceG-like family N4T38_15350 PF01063 Amino-transferase class IV N4T38_15365 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_15370 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_15375 PF00005 ABC transporter N4T38_15375 PF12857 TOBE-like domain N4T38_15380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_15380 PF03466 LysR substrate binding domain N4T38_15390 PF00132 Bacterial transferase hexapeptide (six repeats) N4T38_15390 PF14602 Hexapeptide repeat of succinyl-transferase N4T38_15390 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal N4T38_15400 PF06508 Queuosine biosynthesis protein QueC N4T38_15415 PF00578 AhpC/TSA family N4T38_15425 PF00293 NUDIX domain N4T38_15425 PF01467 Cytidylyltransferase-like N4T38_15430 PF00378 Enoyl-CoA hydratase/isomerase N4T38_15435 PF01784 NIF3 (NGG1p interacting factor 3) N4T38_15445 PF07690 Major Facilitator Superfamily N4T38_15450 PF02769 AIR synthase related protein, C-terminal domain N4T38_15450 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain N4T38_15450 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal N4T38_15455 PF01966 HD domain N4T38_15460 PF01330 RuvA N terminal domain N4T38_15460 PF07499 RuvA, C-terminal domain N4T38_15465 PF17864 RuvB AAA lid domain N4T38_15465 PF05491 RuvB C-terminal winged helix domain N4T38_15465 PF05496 Holliday junction DNA helicase RuvB P-loop domain N4T38_15470 PF07687 Peptidase dimerisation domain N4T38_15470 PF01546 Peptidase family M20/M25/M40 N4T38_15475 PF03061 Thioesterase superfamily N4T38_15480 PF01618 MotA/TolQ/ExbB proton channel family N4T38_15485 PF02472 Biopolymer transport protein ExbD/TolR N4T38_15495 PF04052 TolB amino-terminal domain N4T38_15495 PF07676 WD40-like Beta Propeller Repeat N4T38_15500 PF00691 OmpA family N4T38_15510 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain N4T38_15515 PF08032 RNA 2'-O ribose methyltransferase substrate binding N4T38_15515 PF00588 SpoU rRNA Methylase family N4T38_15545 PF00308 Bacterial dnaA protein N4T38_15545 PF08299 Bacterial dnaA protein helix-turn-helix N4T38_15545 PF11638 DnaA N-terminal domain N4T38_15550 PF01594 AI-2E family transporter N4T38_15555 PF00586 AIR synthase related protein, N-terminal domain N4T38_15555 PF02769 AIR synthase related protein, C-terminal domain N4T38_15560 PF00551 Formyl transferase N4T38_15565 PF12697 Alpha/beta hydrolase family N4T38_15570 PF06965 Na+/H+ antiporter 1 N4T38_15570 PF01343 Peptidase family S49 N4T38_15580 PF03772 Competence protein N4T38_15580 PF13567 Domain of unknown function (DUF4131) N4T38_15580 PF00753 Metallo-beta-lactamase superfamily N4T38_15585 PF00005 ABC transporter N4T38_15590 PF12704 MacB-like periplasmic core domain N4T38_15590 PF02687 FtsX-like permease family N4T38_15600 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 N4T38_15615 PF00266 Aminotransferase class-V N4T38_15625 PF13533 Biotin-lipoyl like N4T38_15645 PF00535 Glycosyl transferase family 2 N4T38_15660 PF03989 DNA gyrase C-terminal domain, beta-propeller N4T38_15660 PF00521 DNA gyrase/topoisomerase IV, subunit A N4T38_15665 PF01012 Electron transfer flavoprotein domain N4T38_15665 PF00766 Electron transfer flavoprotein FAD-binding domain N4T38_15670 PF01012 Electron transfer flavoprotein domain N4T38_15675 PF02899 Phage integrase, N-terminal SAM-like domain N4T38_15675 PF00589 Phage integrase family N4T38_15680 PF01810 LysE type translocator N4T38_15685 PF01678 Diaminopimelate epimerase N4T38_15690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N4T38_15690 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N4T38_15700 PF00324 Amino acid permease N4T38_15705 PF18073 Rubredoxin metal binding domain N4T38_15715 PF00152 tRNA synthetases class II (D, K and N) N4T38_15720 PF11890 Domain of unknown function (DUF3410) N4T38_15720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4T38_15720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4T38_15725 PF06803 Protein of unknown function (DUF1232) N4T38_15730 PF02634 FdhD/NarQ family N4T38_15735 PF00384 Molybdopterin oxidoreductase N4T38_15740 PF02595 Glycerate kinase family N4T38_15755 PF00881 Nitroreductase family N4T38_15800 PF09857 Putative toxin of bacterial toxin-antitoxin pair N4T38_15810 PF00975 Thioesterase domain N4T38_15810 PF00550 Phosphopantetheine attachment site N4T38_15810 PF00668 Condensation domain N4T38_15810 PF13193 AMP-binding enzyme C-terminal domain N4T38_15810 PF00501 AMP-binding enzyme N4T38_15820 PF13737 Transposase DDE domain N4T38_15835 PF01272 Transcription elongation factor, GreA/GreB, C-term N4T38_15835 PF03449 Transcription elongation factor, N-terminal N4T38_15840 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T38_15840 PF01464 Transglycosylase SLT domain N4T38_15850 PF01171 PP-loop family N4T38_15855 PF01464 Transglycosylase SLT domain N4T38_15860 PF01435 Peptidase family M48 N4T38_15870 PF00873 AcrB/AcrD/AcrF family N4T38_15875 PF03009 Glycerophosphoryl diester phosphodiesterase family N4T38_15885 PF01219 Prokaryotic diacylglycerol kinase N4T38_15890 PF00118 TCP-1/cpn60 chaperonin family N4T38_15895 PF00166 Chaperonin 10 Kd subunit N4T38_15905 PF00149 Calcineurin-like phosphoesterase N4T38_15910 PF00781 Diacylglycerol kinase catalytic domain N4T38_15915 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain N4T38_15915 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain N4T38_15920 PF01266 FAD dependent oxidoreductase N4T38_15920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase N4T38_15925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N4T38_15925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N4T38_15930 PF00083 Sugar (and other) transporter N4T38_15945 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N4T38_15945 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N4T38_15960 PF16655 PhoD-like phosphatase, N-terminal domain N4T38_15960 PF09423 PhoD-like phosphatase N4T38_15980 PF00809 Pterin binding enzyme N4T38_15985 PF17862 AAA+ lid domain N4T38_15985 PF00004 ATPase family associated with various cellular activities (AAA) N4T38_15985 PF06480 FtsH Extracellular N4T38_15985 PF01434 Peptidase family M41 N4T38_15990 PF01728 FtsJ-like methyltransferase N4T38_15995 PF01985 CRS1 / YhbY (CRM) domain N4T38_16010 PF00117 Glutamine amidotransferase class-I N4T38_16010 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N4T38_16015 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N4T38_16015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T38_16015 PF02142 MGS-like domain N4T38_16020 PF03449 Transcription elongation factor, N-terminal N4T38_16020 PF01272 Transcription elongation factor, GreA/GreB, C-term N4T38_16025 PF00132 Bacterial transferase hexapeptide (six repeats) N4T38_16030 PF00582 Universal stress protein family N4T38_16035 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N4T38_16045 PF09587 Bacterial capsule synthesis protein PGA_cap N4T38_16060 PF00999 Sodium/hydrogen exchanger family N4T38_16065 PF04228 Putative neutral zinc metallopeptidase N4T38_16070 PF05661 Protein of unknown function (DUF808) N4T38_16075 PF00579 tRNA synthetases class I (W and Y) N4T38_16080 PF02629 CoA binding domain N4T38_16080 PF00549 CoA-ligase N4T38_16085 PF08442 ATP-grasp domain N4T38_16085 PF00549 CoA-ligase N4T38_16090 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_16090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T38_16095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N4T38_16095 PF00364 Biotin-requiring enzyme N4T38_16095 PF02817 e3 binding domain N4T38_16100 PF16078 2-oxoglutarate dehydrogenase N-terminus N4T38_16100 PF16870 2-oxoglutarate dehydrogenase C-terminal N4T38_16100 PF02779 Transketolase, pyrimidine binding domain N4T38_16100 PF00676 Dehydrogenase E1 component N4T38_16115 PF13085 2Fe-2S iron-sulfur cluster binding domain N4T38_16120 PF00890 FAD binding domain N4T38_16120 PF02910 Fumarate reductase flavoprotein C-term N4T38_16125 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N4T38_16130 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N4T38_16135 PF00285 Citrate synthase, C-terminal domain N4T38_16145 PF17773 UPF0176 acylphosphatase like domain N4T38_16145 PF00581 Rhodanese-like domain N4T38_16160 PF04545 Sigma-70, region 4 N4T38_16160 PF03979 Sigma-70 factor, region 1.1 N4T38_16160 PF00140 Sigma-70 factor, region 1.2 N4T38_16160 PF04542 Sigma-70 region 2 N4T38_16160 PF04539 Sigma-70 region 3 N4T38_16160 PF04546 Sigma-70, non-essential region N4T38_16165 PF04359 Protein of unknown function (DUF493) N4T38_16170 PF03099 Biotin/lipoate A/B protein ligase family N4T38_16180 PF00465 Iron-containing alcohol dehydrogenase N4T38_16185 PF13520 Amino acid permease N4T38_16190 PF03358 NADPH-dependent FMN reductase N4T38_16195 PF01638 HxlR-like helix-turn-helix N4T38_16200 PF00588 SpoU rRNA Methylase family N4T38_16205 PF14824 Sirohaem biosynthesis protein central N4T38_16205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N4T38_16205 PF10414 Sirohaem synthase dimerisation region N4T38_16210 PF02403 Seryl-tRNA synthetase N-terminal domain N4T38_16210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4T38_16220 PF03548 Outer membrane lipoprotein carrier protein LolA N4T38_16225 PF01016 Ribosomal L27 protein N4T38_16230 PF00829 Ribosomal prokaryotic L21 protein N4T38_16240 PF00348 Polyprenyl synthetase N4T38_16245 PF01406 tRNA synthetases class I (C) catalytic domain N4T38_16245 PF09190 DALR domain N4T38_16250 PF01569 PAP2 superfamily N4T38_16255 PF00529 HlyD membrane-fusion protein of T1SS N4T38_16255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T38_16260 PF00873 AcrB/AcrD/AcrF family N4T38_16265 PF02321 Outer membrane efflux protein N4T38_16270 PF01906 Putative heavy-metal-binding N4T38_16275 PF01906 Putative heavy-metal-binding N4T38_16295 PF08264 Anticodon-binding domain of tRNA N4T38_16295 PF00133 tRNA synthetases class I (I, L, M and V) N4T38_16295 PF10458 Valyl tRNA synthetase tRNA binding arm N4T38_16320 PF00909 Ammonium Transporter Family N4T38_16330 PF08521 Two-component sensor kinase N-terminal N4T38_16330 PF00512 His Kinase A (phospho-acceptor) domain N4T38_16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_16335 PF00072 Response regulator receiver domain N4T38_16335 PF00486 Transcriptional regulatory protein, C terminal N4T38_16340 PF00884 Sulfatase N4T38_16340 PF08019 Phosphoethanolamine transferase EptA/EptB N4T38_16360 PF01734 Patatin-like phospholipase N4T38_16370 PF01145 SPFH domain / Band 7 family N4T38_16375 PF04237 YjbR N4T38_16380 PF00348 Polyprenyl synthetase N4T38_16385 PF04303 PrpF protein N4T38_16390 PF00324 Amino acid permease N4T38_16400 PF13356 Arm DNA-binding domain N4T38_16400 PF00589 Phage integrase family N4T38_16440 PF00772 DnaB-like helicase N terminal domain N4T38_16440 PF03796 DnaB-like helicase C terminal domain N4T38_16485 PF01048 Phosphorylase superfamily N4T38_16490 PF10609 NUBPL iron-transfer P-loop NTPase N4T38_16500 PF09334 tRNA synthetases class I (M) N4T38_16500 PF01588 Putative tRNA binding domain N4T38_16525 PF13533 Biotin-lipoyl like N4T38_16530 PF00291 Pyridoxal-phosphate dependent enzyme N4T38_16545 PF05552 Conserved TM helix N4T38_16560 PF00175 Oxidoreductase NAD-binding domain N4T38_16560 PF00970 Oxidoreductase FAD-binding domain N4T38_16565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_16565 PF03466 LysR substrate binding domain N4T38_16570 PF00313 'Cold-shock' DNA-binding domain N4T38_16580 PF00361 Proton-conducting membrane transporter N4T38_16585 PF00361 Proton-conducting membrane transporter N4T38_16590 PF00361 Proton-conducting membrane transporter N4T38_16590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N4T38_16595 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L N4T38_16600 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 N4T38_16605 PF12838 4Fe-4S dicluster domain N4T38_16610 PF00146 NADH dehydrogenase N4T38_16615 PF00384 Molybdopterin oxidoreductase N4T38_16615 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region N4T38_16615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N4T38_16620 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit N4T38_16620 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region N4T38_16620 PF10531 SLBB domain N4T38_16630 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit N4T38_16630 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit N4T38_16635 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit N4T38_16640 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 N4T38_16645 PF00990 Diguanylate cyclase, GGDEF domain N4T38_16645 PF17151 Periplasmic sensor domain N4T38_16655 PF00672 HAMP domain N4T38_16655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_16655 PF00512 His Kinase A (phospho-acceptor) domain N4T38_16660 PF00486 Transcriptional regulatory protein, C terminal N4T38_16660 PF00072 Response regulator receiver domain N4T38_16670 PF02867 Ribonucleotide reductase, barrel domain N4T38_16670 PF00317 Ribonucleotide reductase, all-alpha domain N4T38_16670 PF03477 ATP cone domain N4T38_16680 PF00268 Ribonucleotide reductase, small chain N4T38_16690 PF02567 Phenazine biosynthesis-like protein N4T38_16720 PF17074 Darcynin, domain of unknown function N4T38_16725 PF06594 Haemolysin-type calcium binding protein related domain N4T38_16725 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) N4T38_16735 PF17074 Darcynin, domain of unknown function N4T38_16750 PF01613 Flavin reductase like domain N4T38_16755 PF08267 Cobalamin-independent synthase, N-terminal domain N4T38_16755 PF01717 Cobalamin-independent synthase, Catalytic domain N4T38_16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_16780 PF03466 LysR substrate binding domain N4T38_16785 PF07690 Major Facilitator Superfamily N4T38_16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_16795 PF03466 LysR substrate binding domain N4T38_16800 PF00890 FAD binding domain N4T38_16800 PF14537 Cytochrome c3 N4T38_16810 PF02515 CoA-transferase family III N4T38_16815 PF07690 Major Facilitator Superfamily N4T38_16820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_16820 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_16820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_16825 PF03466 LysR substrate binding domain N4T38_16825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_16830 PF00107 Zinc-binding dehydrogenase N4T38_16830 PF08240 Alcohol dehydrogenase GroES-like domain N4T38_16835 PF00962 Adenosine/AMP deaminase N4T38_16860 PF02445 Quinolinate synthetase A protein N4T38_16865 PF01960 ArgJ family N4T38_16870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N4T38_16870 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N4T38_16875 PF00893 Small Multidrug Resistance protein N4T38_16890 PF07732 Multicopper oxidase N4T38_16890 PF00394 Multicopper oxidase N4T38_16890 PF07731 Multicopper oxidase N4T38_16905 PF00834 Ribulose-phosphate 3 epimerase family N4T38_16915 PF00756 Putative esterase N4T38_16925 PF04445 Putative SAM-dependent methyltransferase N4T38_16930 PF00814 Glycoprotease family N4T38_16935 PF00132 Bacterial transferase hexapeptide (six repeats) N4T38_16940 PF00293 NUDIX domain N4T38_16980 PF00425 chorismate binding enzyme N4T38_16980 PF04715 Anthranilate synthase component I, N terminal region N4T38_16985 PF00155 Aminotransferase class I and II N4T38_16990 PF00815 Histidinol dehydrogenase N4T38_16995 PF01634 ATP phosphoribosyltransferase N4T38_17000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N4T38_17005 PF01722 BolA-like protein N4T38_17010 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N4T38_17015 PF00309 Sigma-54 factor, Activator interacting domain (AID) N4T38_17015 PF04963 Sigma-54 factor, core binding domain N4T38_17015 PF04552 Sigma-54, DNA binding domain N4T38_17060 PF00795 Carbon-nitrogen hydrolase N4T38_17070 PF01047 MarR family N4T38_17075 PF02566 OsmC-like protein N4T38_17080 PF00437 Type II/IV secretion system protein N4T38_17100 PF01367 5'-3' exonuclease, C-terminal SAM fold N4T38_17100 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N4T38_17100 PF00476 DNA polymerase family A N4T38_17100 PF01612 3'-5' exonuclease N4T38_17105 PF02325 YGGT family N4T38_17110 PF14748 Pyrroline-5-carboxylate reductase dimerisation N4T38_17110 PF03807 NADP oxidoreductase coenzyme F420-dependent N4T38_17115 PF01171 PP-loop family N4T38_17115 PF09179 TilS substrate binding domain N4T38_17115 PF11734 TilS substrate C-terminal domain N4T38_17120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N4T38_17125 PF02541 Ppx/GppA phosphatase family N4T38_17130 PF00085 Thioredoxin N4T38_17135 PF07498 Rho termination factor, N-terminal domain N4T38_17135 PF07497 Rho termination factor, RNA-binding domain N4T38_17135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4T38_17150 PF00216 Bacterial DNA-binding protein N4T38_17155 PF03483 B3/4 domain N4T38_17155 PF03484 tRNA synthetase B5 domain N4T38_17155 PF03147 Ferredoxin-fold anticodon binding domain N4T38_17155 PF01588 Putative tRNA binding domain N4T38_17155 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain N4T38_17160 PF01409 tRNA synthetases class II core domain (F) N4T38_17160 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N4T38_17175 PF00453 Ribosomal protein L20 N4T38_17180 PF01632 Ribosomal protein L35 N4T38_17190 PF07690 Major Facilitator Superfamily N4T38_17195 PF09335 SNARE associated Golgi protein N4T38_17200 PF00043 Glutathione S-transferase, C-terminal domain N4T38_17200 PF02798 Glutathione S-transferase, N-terminal domain N4T38_17205 PF05198 Translation initiation factor IF-3, N-terminal domain N4T38_17205 PF00707 Translation initiation factor IF-3, C-terminal domain N4T38_17210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N4T38_17210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4T38_17210 PF02824 TGS domain N4T38_17210 PF03129 Anticodon binding domain N4T38_17215 PF00501 AMP-binding enzyme N4T38_17215 PF13193 AMP-binding enzyme C-terminal domain N4T38_17220 PF04751 Protein of unknown function (DUF615) N4T38_17225 PF00381 PTS HPr component phosphorylation site N4T38_17230 PF03668 P-loop ATPase protein family N4T38_17235 PF02569 Pantoate-beta-alanine ligase N4T38_17240 PF02548 Ketopantoate hydroxymethyltransferase N4T38_17245 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N4T38_17250 PF12627 Probable RNA and SrmB- binding site of polymerase A N4T38_17250 PF12626 Polymerase A arginine-rich C-terminus N4T38_17250 PF01743 Poly A polymerase head domain N4T38_17260 PF03819 MazG nucleotide pyrophosphohydrolase domain N4T38_17270 PF02824 TGS domain N4T38_17270 PF13291 ACT domain N4T38_17270 PF04607 Region found in RelA / SpoT proteins N4T38_17275 PF05958 tRNA (Uracil-5-)-methyltransferase N4T38_17285 PF00291 Pyridoxal-phosphate dependent enzyme N4T38_17290 PF00672 HAMP domain N4T38_17290 PF00512 His Kinase A (phospho-acceptor) domain N4T38_17290 PF01627 Hpt domain N4T38_17290 PF00072 Response regulator receiver domain N4T38_17290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N4T38_17290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_17295 PF00378 Enoyl-CoA hydratase/isomerase N4T38_17300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N4T38_17300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N4T38_17305 PF01261 Xylose isomerase-like TIM barrel N4T38_17315 PF00106 short chain dehydrogenase N4T38_17320 PF02233 NAD(P) transhydrogenase beta subunit N4T38_17325 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch N4T38_17330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N4T38_17330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N4T38_17335 PF00892 EamA-like transporter family N4T38_17345 PF07690 Major Facilitator Superfamily N4T38_17350 PF01207 Dihydrouridine synthase (Dus) N4T38_17360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_17360 PF03466 LysR substrate binding domain N4T38_17370 PF00899 ThiF family N4T38_17380 PF00694 Aconitase C-terminal domain N4T38_17380 PF00330 Aconitase family (aconitate hydratase) N4T38_17385 PF01026 TatD related DNase N4T38_17400 PF03144 Elongation factor Tu domain 2 N4T38_17400 PF16658 Class II release factor RF3, C-terminal domain N4T38_17400 PF00009 Elongation factor Tu GTP binding domain N4T38_17410 PF00665 Integrase core domain N4T38_17410 PF13936 Helix-turn-helix domain N4T38_17415 PF01636 Phosphotransferase enzyme family N4T38_17420 PF13936 Helix-turn-helix domain N4T38_17420 PF00665 Integrase core domain N4T38_17435 PF00990 Diguanylate cyclase, GGDEF domain N4T38_17435 PF03707 Bacterial signalling protein N terminal repeat N4T38_17435 PF00563 EAL domain N4T38_17440 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N4T38_17440 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N4T38_17445 PF10369 Small subunit of acetolactate synthase N4T38_17450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4T38_17450 PF00205 Thiamine pyrophosphate enzyme, central domain N4T38_17450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4T38_17460 PF13603 Leucyl-tRNA synthetase, Domain 2 N4T38_17460 PF00133 tRNA synthetases class I (I, L, M and V) N4T38_17460 PF08264 Anticodon-binding domain of tRNA N4T38_17460 PF09334 tRNA synthetases class I (M) N4T38_17475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T38_17480 PF00005 ABC transporter N4T38_17480 PF02687 FtsX-like permease family N4T38_17480 PF12704 MacB-like periplasmic core domain N4T38_17485 PF02321 Outer membrane efflux protein N4T38_17500 PF00929 Exonuclease N4T38_17505 PF03193 RsgA GTPase N4T38_17515 PF00462 Glutaredoxin N4T38_17520 PF02556 Preprotein translocase subunit SecB N4T38_17530 PF01926 50S ribosome-binding GTPase N4T38_17530 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N4T38_17535 PF13360 PQQ-like domain N4T38_17545 PF13393 Histidyl-tRNA synthetase N4T38_17545 PF03129 Anticodon binding domain N4T38_17550 PF04551 GcpE protein N4T38_17555 PF13464 Domain of unknown function (DUF4115) N4T38_17565 PF04055 Radical SAM superfamily N4T38_17570 PF00334 Nucleoside diphosphate kinase N4T38_17575 PF04384 Iron-sulphur cluster assembly N4T38_17580 PF01569 PAP2 superfamily N4T38_17585 PF00534 Glycosyl transferases group 1 N4T38_17585 PF13439 Glycosyltransferase Family 4 N4T38_17590 PF11818 C-terminal domain of tail specific protease (DUF3340) N4T38_17590 PF00595 PDZ domain N4T38_17590 PF03572 Peptidase family S41 N4T38_17590 PF17804 Tail specific protease N-terminal domain N4T38_17595 PF00933 Glycosyl hydrolase family 3 N terminal domain N4T38_17605 PF00561 alpha/beta hydrolase fold N4T38_17610 PF00171 Aldehyde dehydrogenase family N4T38_17615 PF00171 Aldehyde dehydrogenase family N4T38_17620 PF01202 Shikimate kinase N4T38_17625 PF02447 GntP family permease N4T38_17630 PF01081 KDPG and KHG aldolase N4T38_17635 PF00920 Dehydratase family N4T38_17640 PF00871 Acetokinase family N4T38_17645 PF07085 DRTGG domain N4T38_17645 PF01515 Phosphate acetyl/butaryl transferase N4T38_17650 PF05681 Fumarate hydratase (Fumerase) N4T38_17650 PF05683 Fumarase C-terminus N4T38_17665 PF06689 ClpX C4-type zinc finger N4T38_17665 PF07724 AAA domain (Cdc48 subfamily) N4T38_17665 PF10431 C-terminal, D2-small domain, of ClpB protein N4T38_17670 PF00574 Clp protease N4T38_17675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T38_17675 PF05698 Bacterial trigger factor protein (TF) C-terminus N4T38_17675 PF05697 Bacterial trigger factor protein (TF) N4T38_17680 PF07715 TonB-dependent Receptor Plug Domain N4T38_17680 PF00593 TonB dependent receptor N4T38_17685 PF13640 2OG-Fe(II) oxygenase superfamily N4T38_17685 PF18331 PKHD-type hydroxylase C-terminal domain N4T38_17690 PF08502 LeuA allosteric (dimerisation) domain N4T38_17690 PF00682 HMGL-like N4T38_17695 PF00561 alpha/beta hydrolase fold N4T38_17700 PF07021 Methionine biosynthesis protein MetW N4T38_17700 PF00561 alpha/beta hydrolase fold N4T38_17710 PF01725 Ham1 family N4T38_17720 PF02416 mttA/Hcf106 family N4T38_17725 PF02416 mttA/Hcf106 family N4T38_17730 PF00902 Sec-independent protein translocase protein (TatC) N4T38_17750 PF01790 Prolipoprotein diacylglyceryl transferase N4T38_17765 PF00303 Thymidylate synthase N4T38_17770 PF00186 Dihydrofolate reductase N4T38_17780 PF01625 Peptide methionine sulfoxide reductase N4T38_17790 PF01618 MotA/TolQ/ExbB proton channel family N4T38_17800 PF00551 Formyl transferase N4T38_17800 PF01842 ACT domain N4T38_17810 PF00171 Aldehyde dehydrogenase family N4T38_17815 PF00830 Ribosomal L28 family N4T38_17820 PF00471 Ribosomal protein L33 N4T38_17825 PF00999 Sodium/hydrogen exchanger family N4T38_17825 PF02254 TrkA-N domain N4T38_17845 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) N4T38_17850 PF00580 UvrD/REP helicase N-terminal domain N4T38_17850 PF13361 UvrD-like helicase C-terminal domain N4T38_17865 PF08272 Topoisomerase I zinc-ribbon-like N4T38_17865 PF01131 DNA topoisomerase N4T38_17865 PF01396 Topoisomerase DNA binding C4 zinc finger N4T38_17865 PF01751 Toprim domain N4T38_17875 PF01638 HxlR-like helix-turn-helix N4T38_17880 PF08240 Alcohol dehydrogenase GroES-like domain N4T38_17880 PF00107 Zinc-binding dehydrogenase N4T38_17885 PF04102 SlyX N4T38_17890 PF00005 ABC transporter N4T38_17890 PF16326 ABC transporter C-terminal domain N4T38_17890 PF12848 ABC transporter N4T38_17895 PF01810 LysE type translocator N4T38_17900 PF03279 Bacterial lipid A biosynthesis acyltransferase N4T38_17910 PF00375 Sodium:dicarboxylate symporter family N4T38_17920 PF02774 Semialdehyde dehydrogenase, dimerisation domain N4T38_17920 PF01118 Semialdehyde dehydrogenase, NAD binding domain N4T38_17940 PF01416 tRNA pseudouridine synthase N4T38_17950 PF01176 Translation initiation factor 1A / IF-1 N4T38_17965 PF00180 Isocitrate/isopropylmalate dehydrogenase N4T38_17975 PF00694 Aconitase C-terminal domain N4T38_17980 PF00330 Aconitase family (aconitate hydratase) N4T38_17990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_17990 PF03466 LysR substrate binding domain N4T38_18010 PF00293 NUDIX domain N4T38_18015 PF01590 GAF domain N4T38_18015 PF02896 PEP-utilising enzyme, TIM barrel domain N4T38_18015 PF05524 PEP-utilising enzyme, N-terminal N4T38_18015 PF00391 PEP-utilising enzyme, mobile domain N4T38_18020 PF00141 Peroxidase N4T38_18025 PF12706 Beta-lactamase superfamily domain N4T38_18030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_18030 PF03466 LysR substrate binding domain N4T38_18040 PF02798 Glutathione S-transferase, N-terminal domain N4T38_18045 PF08279 HTH domain N4T38_18045 PF13280 WYL domain N4T38_18050 PF13419 Haloacid dehalogenase-like hydrolase N4T38_18055 PF00849 RNA pseudouridylate synthase N4T38_18055 PF01479 S4 domain N4T38_18060 PF12111 Polyribonucleotide phosphorylase C terminal N4T38_18060 PF10150 Ribonuclease E/G family N4T38_18060 PF00575 S1 RNA binding domain N4T38_18065 PF00501 AMP-binding enzyme N4T38_18065 PF13193 AMP-binding enzyme C-terminal domain N4T38_18080 PF03466 LysR substrate binding domain N4T38_18080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_18090 PF04055 Radical SAM superfamily N4T38_18090 PF06969 HemN C-terminal domain N4T38_18100 PF01554 MatE N4T38_18105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_18105 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_18105 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T38_18110 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T38_18110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_18115 PF03109 ABC1 family N4T38_18120 PF01197 Ribosomal protein L31 N4T38_18135 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N4T38_18145 PF13247 4Fe-4S dicluster domain N4T38_18145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N4T38_18145 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_18155 PF03884 DNA gyrase inhibitor YacG N4T38_18160 PF00753 Metallo-beta-lactamase superfamily N4T38_18165 PF00762 Ferrochelatase N4T38_18175 PF01177 Asp/Glu/Hydantoin racemase N4T38_18190 PF01206 Sulfurtransferase TusA N4T38_18195 PF03471 Transporter associated domain N4T38_18195 PF00571 CBS domain N4T38_18200 PF00795 Carbon-nitrogen hydrolase N4T38_18205 PF01588 Putative tRNA binding domain N4T38_18215 PF07963 Prokaryotic N-terminal methylation motif N4T38_18215 PF08334 Type II secretion system (T2SS), protein G N4T38_18220 PF00482 Type II secretion system (T2SS), protein F N4T38_18225 PF00271 Helicase conserved C-terminal domain N4T38_18225 PF17764 3′ DNA-binding domain (3′BD) N4T38_18225 PF18074 Primosomal protein N C-terminal domain N4T38_18225 PF18319 PriA DNA helicase Cys-rich region (CRR) domain N4T38_18225 PF00270 DEAD/DEAH box helicase N4T38_18230 PF00999 Sodium/hydrogen exchanger family N4T38_18230 PF02254 TrkA-N domain N4T38_18235 PF01430 Hsp33 protein N4T38_18245 PF01556 DnaJ C terminal domain N4T38_18245 PF00226 DnaJ domain N4T38_18255 PF01544 CorA-like Mg2+ transporter protein N4T38_18260 PF00013 KH domain N4T38_18260 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N4T38_18260 PF01138 3' exoribonuclease family, domain 1 N4T38_18260 PF03725 3' exoribonuclease family, domain 2 N4T38_18260 PF00575 S1 RNA binding domain N4T38_18265 PF00312 Ribosomal protein S15 N4T38_18270 PF00144 Beta-lactamase N4T38_18275 PF13538 UvrD-like helicase C-terminal domain N4T38_18280 PF13361 UvrD-like helicase C-terminal domain N4T38_18280 PF12705 PD-(D/E)XK nuclease superfamily N4T38_18280 PF00580 UvrD/REP helicase N-terminal domain N4T38_18285 PF17946 RecC C-terminal domain N4T38_18295 PF03976 Polyphosphate kinase 2 (PPK2) N4T38_18305 PF01209 ubiE/COQ5 methyltransferase family N4T38_18315 PF03109 ABC1 family N4T38_18320 PF01494 FAD binding domain N4T38_18325 PF01502 Phosphoribosyl-AMP cyclohydrolase N4T38_18340 PF13244 Domain of unknown function (DUF4040) N4T38_18340 PF00361 Proton-conducting membrane transporter N4T38_18340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N4T38_18340 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter N4T38_18345 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L N4T38_18350 PF00361 Proton-conducting membrane transporter N4T38_18355 PF01899 Na+/H+ ion antiporter subunit N4T38_18360 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) N4T38_18365 PF03334 Na+/H+ antiporter subunit N4T38_18370 PF02033 Ribosome-binding factor A N4T38_18375 PF04760 Translation initiation factor IF-2, N-terminal region N4T38_18375 PF08364 Bacterial translation initiation factor IF-2 associated region N4T38_18375 PF00009 Elongation factor Tu GTP binding domain N4T38_18375 PF11987 Translation-initiation factor 2 N4T38_18380 PF13184 NusA-like KH domain N4T38_18380 PF08529 NusA N-terminal domain N4T38_18380 PF00575 S1 RNA binding domain N4T38_18385 PF02576 RimP N-terminal domain N4T38_18385 PF17384 RimP C-terminal SH3 domain N4T38_18405 PF03840 Preprotein translocase SecG subunit N4T38_18410 PF00121 Triosephosphate isomerase N4T38_18415 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N4T38_18415 PF00437 Type II/IV secretion system protein N4T38_18420 PF00482 Type II secretion system (T2SS), protein F N4T38_18425 PF06750 Bacterial Peptidase A24 N-terminal domain N4T38_18425 PF01478 Type IV leader peptidase family N4T38_18430 PF01121 Dephospho-CoA kinase N4T38_18440 PF00588 SpoU rRNA Methylase family N4T38_18440 PF08032 RNA 2'-O ribose methyltransferase substrate binding N4T38_18445 PF06865 Pyrimidine/purine nucleoside phosphorylase N4T38_18455 PF02463 RecF/RecN/SMC N terminal domain N4T38_18460 PF02622 Uncharacterized ACR, COG1678 N4T38_18465 PF03652 Holliday junction resolvase N4T38_18470 PF13533 Biotin-lipoyl like N4T38_18495 PF02805 Metal binding domain of Ada N4T38_18495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N4T38_18495 PF12833 Helix-turn-helix domain N4T38_18495 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N4T38_18500 PF01066 CDP-alcohol phosphatidyltransferase N4T38_18510 PF08459 UvrC Helix-hairpin-helix N-terminal N4T38_18510 PF02151 UvrB/uvrC motif N4T38_18510 PF01541 GIY-YIG catalytic domain N4T38_18530 PF00665 Integrase core domain N4T38_18530 PF13936 Helix-turn-helix domain N4T38_18550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T38_18550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T38_18550 PF00378 Enoyl-CoA hydratase/isomerase N4T38_18555 PF02803 Thiolase, C-terminal domain N4T38_18555 PF00108 Thiolase, N-terminal domain N4T38_18570 PF09278 MerR, DNA binding N4T38_18570 PF00376 MerR family regulatory protein N4T38_18580 PF01323 DSBA-like thioredoxin domain N4T38_18595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_18595 PF00183 Hsp90 protein N4T38_18610 PF13726 Na+-H+ antiporter family N4T38_18610 PF03553 Na+/H+ antiporter family N4T38_18615 PF00561 alpha/beta hydrolase fold N4T38_18625 PF13737 Transposase DDE domain N4T38_18640 PF00623 RNA polymerase Rpb1, domain 2 N4T38_18640 PF04983 RNA polymerase Rpb1, domain 3 N4T38_18640 PF05000 RNA polymerase Rpb1, domain 4 N4T38_18640 PF04998 RNA polymerase Rpb1, domain 5 N4T38_18640 PF04997 RNA polymerase Rpb1, domain 1 N4T38_18645 PF04563 RNA polymerase beta subunit N4T38_18645 PF04561 RNA polymerase Rpb2, domain 2 N4T38_18645 PF04565 RNA polymerase Rpb2, domain 3 N4T38_18645 PF10385 RNA polymerase beta subunit external 1 domain N4T38_18645 PF04560 RNA polymerase Rpb2, domain 7 N4T38_18645 PF00562 RNA polymerase Rpb2, domain 6 N4T38_18650 PF00542 Ribosomal protein L7/L12 C-terminal domain N4T38_18650 PF16320 Ribosomal protein L7/L12 dimerisation domain N4T38_18655 PF00466 Ribosomal protein L10 N4T38_18660 PF00687 Ribosomal protein L1p/L10e family N4T38_18665 PF00298 Ribosomal protein L11, RNA binding domain N4T38_18665 PF03946 Ribosomal protein L11, N-terminal domain N4T38_18670 PF02357 Transcription termination factor nusG N4T38_18670 PF00467 KOW motif N4T38_18675 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N4T38_18685 PF00009 Elongation factor Tu GTP binding domain N4T38_18685 PF03143 Elongation factor Tu C-terminal domain N4T38_18685 PF03144 Elongation factor Tu domain 2 N4T38_18710 PF00425 chorismate binding enzyme N4T38_18710 PF04715 Anthranilate synthase component I, N terminal region N4T38_18715 PF13419 Haloacid dehalogenase-like hydrolase N4T38_18720 PF12401 Protein of unknown function (DUF2662) N4T38_18720 PF00498 FHA domain N4T38_18725 PF00263 Bacterial type II and III secretion system protein N4T38_18725 PF03958 Bacterial type II/III secretion system short domain N4T38_18740 PF00816 H-NS histone family N4T38_18765 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N4T38_18765 PF03900 Porphobilinogen deaminase, C-terminal domain N4T38_18770 PF04397 LytTr DNA-binding domain N4T38_18770 PF00072 Response regulator receiver domain N4T38_18775 PF06580 Histidine kinase N4T38_18775 PF07694 5TMR of 5TMR-LYT N4T38_18775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_18780 PF00206 Lyase N4T38_18780 PF14698 Argininosuccinate lyase C-terminal N4T38_18785 PF04362 Bacterial Fe(2+) trafficking N4T38_18790 PF01895 PhoU domain N4T38_18795 PF02321 Outer membrane efflux protein N4T38_18800 PF00892 EamA-like transporter family N4T38_18815 PF13667 ThiC-associated domain N4T38_18815 PF01964 Radical SAM ThiC family N4T38_18820 PF00293 NUDIX domain N4T38_18825 PF00149 Calcineurin-like phosphoesterase N4T38_18830 PF01258 Prokaryotic dksA/traR C4-type zinc finger N4T38_18835 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4T38_18840 PF01098 Cell cycle protein N4T38_18845 PF02875 Mur ligase family, glutamate ligase domain N4T38_18845 PF08245 Mur ligase middle domain N4T38_18855 PF07664 Ferrous iron transport protein B C terminus N4T38_18855 PF02421 Ferrous iron transport protein B N4T38_18855 PF07670 Nucleoside recognition N4T38_18865 PF02899 Phage integrase, N-terminal SAM-like domain N4T38_18865 PF00589 Phage integrase family N4T38_18870 PF10411 Disulfide bond isomerase protein N-terminus N4T38_18870 PF13098 Thioredoxin-like domain N4T38_18875 PF01842 ACT domain N4T38_18875 PF00742 Homoserine dehydrogenase N4T38_18875 PF03447 Homoserine dehydrogenase, NAD binding domain N4T38_18880 PF00291 Pyridoxal-phosphate dependent enzyme N4T38_18885 PF00768 D-alanyl-D-alanine carboxypeptidase N4T38_18890 PF00196 Bacterial regulatory proteins, luxR family N4T38_18890 PF00072 Response regulator receiver domain N4T38_18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_18895 PF00512 His Kinase A (phospho-acceptor) domain N4T38_18900 PF00158 Sigma-54 interaction domain N4T38_18900 PF02954 Bacterial regulatory protein, Fis family N4T38_18900 PF00072 Response regulator receiver domain N4T38_18905 PF00595 PDZ domain N4T38_18905 PF03572 Peptidase family S41 N4T38_18910 PF06415 BPG-independent PGAM N-terminus (iPGM_N) N4T38_18910 PF01676 Metalloenzyme superfamily N4T38_18915 PF03739 Lipopolysaccharide export system permease LptF/LptG N4T38_18925 PF02789 Cytosol aminopeptidase family, N-terminal domain N4T38_18925 PF00883 Cytosol aminopeptidase family, catalytic domain N4T38_18945 PF00677 Lumazine binding domain N4T38_18955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N4T38_18955 PF01872 RibD C-terminal domain N4T38_18960 PF03477 ATP cone domain N4T38_18965 PF00909 Ammonium Transporter Family N4T38_18970 PF00543 Nitrogen regulatory protein P-II N4T38_18990 PF00916 Sulfate permease family N4T38_18990 PF01740 STAS domain N4T38_18995 PF00582 Universal stress protein family N4T38_19025 PF00665 Integrase core domain N4T38_19040 PF00155 Aminotransferase class I and II N4T38_19040 PF00392 Bacterial regulatory proteins, gntR family N4T38_19050 PF00701 Dihydrodipicolinate synthetase family N4T38_19070 PF03573 outer membrane porin, OprD family N4T38_19075 PF00719 Inorganic pyrophosphatase N4T38_19090 PF13193 AMP-binding enzyme C-terminal domain N4T38_19090 PF00501 AMP-binding enzyme N4T38_19095 PF03989 DNA gyrase C-terminal domain, beta-propeller N4T38_19095 PF00521 DNA gyrase/topoisomerase IV, subunit A N4T38_19100 PF07690 Major Facilitator Superfamily N4T38_19105 PF03458 UPF0126 domain N4T38_19110 PF02810 SEC-C motif N4T38_19115 PF03471 Transporter associated domain N4T38_19115 PF03741 Integral membrane protein TerC family N4T38_19120 PF03641 Possible lysine decarboxylase N4T38_19125 PF07690 Major Facilitator Superfamily N4T38_19135 PF11799 impB/mucB/samB family C-terminal domain N4T38_19135 PF00817 impB/mucB/samB family N4T38_19135 PF11798 IMS family HHH motif N4T38_19155 PF11842 Domain of unknown function (DUF3362) N4T38_19155 PF04055 Radical SAM superfamily N4T38_19155 PF08497 Radical SAM N-terminal N4T38_19175 PF03358 NADPH-dependent FMN reductase N4T38_19185 PF00291 Pyridoxal-phosphate dependent enzyme N4T38_19245 PF01327 Polypeptide deformylase N4T38_19255 PF02481 DNA recombination-mediator protein A N4T38_19255 PF17782 DprA winged helix domain N4T38_19260 PF01300 Telomere recombination N4T38_19265 PF00892 EamA-like transporter family N4T38_19270 PF00440 Bacterial regulatory proteins, tetR family N4T38_19275 PF07690 Major Facilitator Superfamily N4T38_19285 PF00255 Glutathione peroxidase N4T38_19295 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N4T38_19300 PF02874 ATP synthase alpha/beta family, beta-barrel domain N4T38_19300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4T38_19305 PF00231 ATP synthase N4T38_19310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4T38_19310 PF00306 ATP synthase alpha/beta chain, C terminal domain N4T38_19310 PF02874 ATP synthase alpha/beta family, beta-barrel domain N4T38_19315 PF00213 ATP synthase delta (OSCP) subunit N4T38_19320 PF00430 ATP synthase B/B' CF(0) N4T38_19325 PF00137 ATP synthase subunit C N4T38_19330 PF00119 ATP synthase A chain N4T38_19350 PF00005 ABC transporter N4T38_19355 PF00950 ABC 3 transport family N4T38_19360 PF01810 LysE type translocator N4T38_19365 PF04261 Dyp-type peroxidase family N4T38_19375 PF00390 Malic enzyme, N-terminal domain N4T38_19375 PF03949 Malic enzyme, NAD binding domain N4T38_19380 PF05746 DALR anticodon binding domain N4T38_19380 PF00750 tRNA synthetases class I (R) N4T38_19380 PF03485 Arginyl tRNA synthetase N terminal domain N4T38_19400 PF02678 Pirin N4T38_19400 PF05726 Pirin C-terminal cupin domain N4T38_19410 PF03551 Transcriptional regulator PadR-like family N4T38_19415 PF01909 Nucleotidyltransferase domain N4T38_19415 PF13427 Domain of unknown function (DUF4111) N4T38_19420 PF00117 Glutamine amidotransferase class-I N4T38_19420 PF02540 NAD synthase N4T38_19420 PF00958 GMP synthase C terminal domain N4T38_19425 PF04286 Protein of unknown function (DUF445) N4T38_19430 PF07681 DoxX N4T38_19435 PF09335 SNARE associated Golgi protein N4T38_19450 PF13614 AAA domain N4T38_19460 PF01722 BolA-like protein N4T38_19475 PF01648 4'-phosphopantetheinyl transferase superfamily N4T38_19480 PF12697 Alpha/beta hydrolase family N4T38_19500 PF00550 Phosphopantetheine attachment site N4T38_19500 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T38_19500 PF16197 Ketoacyl-synthetase C-terminal extension N4T38_19500 PF00975 Thioesterase domain N4T38_19500 PF08242 Methyltransferase domain N4T38_19500 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T38_19500 PF14765 Polyketide synthase dehydratase N4T38_19505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_19505 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_19505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_19510 PF00501 AMP-binding enzyme N4T38_19515 PF00665 Integrase core domain N4T38_19515 PF13936 Helix-turn-helix domain N4T38_19520 PF00196 Bacterial regulatory proteins, luxR family N4T38_19520 PF03472 Autoinducer binding domain N4T38_19530 PF00765 Autoinducer synthase N4T38_19535 PF00083 Sugar (and other) transporter N4T38_19535 PF07690 Major Facilitator Superfamily N4T38_19540 PF00378 Enoyl-CoA hydratase/isomerase N4T38_19545 PF00378 Enoyl-CoA hydratase/isomerase N4T38_19550 PF02770 Acyl-CoA dehydrogenase, middle domain N4T38_19550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T38_19550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T38_19555 PF13193 AMP-binding enzyme C-terminal domain N4T38_19555 PF00501 AMP-binding enzyme N4T38_19560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N4T38_19560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N4T38_19565 PF00171 Aldehyde dehydrogenase family N4T38_19575 PF00324 Amino acid permease N4T38_19580 PF00324 Amino acid permease N4T38_19585 PF01042 Endoribonuclease L-PSP N4T38_19590 PF00842 Alanine racemase, C-terminal domain N4T38_19590 PF01168 Alanine racemase, N-terminal domain N4T38_19595 PF01266 FAD dependent oxidoreductase N4T38_19600 PF01037 Lrp/AsnC ligand binding domain N4T38_19610 PF07715 TonB-dependent Receptor Plug Domain N4T38_19610 PF00593 TonB dependent receptor N4T38_19625 PF00849 RNA pseudouridylate synthase N4T38_19640 PF00440 Bacterial regulatory proteins, tetR family N4T38_19640 PF08361 MAATS-type transcriptional repressor, C-terminal region N4T38_19650 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T38_19650 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T38_19685 PF00694 Aconitase C-terminal domain N4T38_19685 PF00330 Aconitase family (aconitate hydratase) N4T38_19690 PF00285 Citrate synthase, C-terminal domain N4T38_19700 PF00392 Bacterial regulatory proteins, gntR family N4T38_19700 PF07729 FCD domain N4T38_19710 PF00155 Aminotransferase class I and II N4T38_19715 PF09330 D-lactate dehydrogenase, membrane binding N4T38_19715 PF01565 FAD binding domain N4T38_19720 PF01070 FMN-dependent dehydrogenase N4T38_19725 PF07729 FCD domain N4T38_19725 PF00392 Bacterial regulatory proteins, gntR family N4T38_19730 PF02652 L-lactate permease N4T38_19735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T38_19735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T38_19735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T38_19735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T38_19740 PF16363 GDP-mannose 4,6 dehydratase N4T38_19745 PF00342 Phosphoglucose isomerase N4T38_19750 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N4T38_19750 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N4T38_19750 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N4T38_19755 PF00483 Nucleotidyl transferase N4T38_19760 PF02397 Bacterial sugar transferase N4T38_19765 PF00535 Glycosyl transferase family 2 N4T38_19795 PF08666 SAF domain N4T38_19795 PF03102 NeuB family N4T38_19810 PF02348 Cytidylyltransferase N4T38_19815 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N4T38_19820 PF02719 Polysaccharide biosynthesis protein N4T38_19825 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N4T38_19825 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N4T38_19825 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N4T38_19830 PF18412 Outer-membrane lipoprotein Wza C-terminal domain N4T38_19830 PF10531 SLBB domain N4T38_19830 PF02563 Polysaccharide biosynthesis/export protein N4T38_19835 PF01451 Low molecular weight phosphotyrosine protein phosphatase N4T38_19840 PF13614 AAA domain N4T38_19840 PF13807 G-rich domain on putative tyrosine kinase N4T38_19840 PF02706 Chain length determinant protein N4T38_19845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T38_19845 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N4T38_19850 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N4T38_19850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T38_19855 PF03023 Lipid II flippase MurJ N4T38_19860 PF01510 N-acetylmuramoyl-L-alanine amidase N4T38_19865 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain N4T38_19865 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain N4T38_19885 PF01138 3' exoribonuclease family, domain 1 N4T38_19885 PF03725 3' exoribonuclease family, domain 2 N4T38_19890 PF00487 Fatty acid desaturase N4T38_19895 PF00175 Oxidoreductase NAD-binding domain N4T38_19900 PF00440 Bacterial regulatory proteins, tetR family N4T38_19905 PF00440 Bacterial regulatory proteins, tetR family N4T38_19905 PF08360 QacR-like protein, C-terminal region N4T38_19910 PF01323 DSBA-like thioredoxin domain N4T38_19920 PF13419 Haloacid dehalogenase-like hydrolase N4T38_19925 PF00106 short chain dehydrogenase N4T38_19940 PF00696 Amino acid kinase family N4T38_19940 PF00583 Acetyltransferase (GNAT) family N4T38_19945 PF09084 NMT1/THI5 like N4T38_19950 PF09084 NMT1/THI5 like N4T38_19955 PF00296 Luciferase-like monooxygenase N4T38_19960 PF00528 Binding-protein-dependent transport system inner membrane component N4T38_19965 PF00005 ABC transporter N4T38_19970 PF08362 YcdC-like protein, C-terminal region N4T38_19970 PF00440 Bacterial regulatory proteins, tetR family N4T38_19975 PF01048 Phosphorylase superfamily N4T38_19985 PF06574 FAD synthetase N4T38_19985 PF01687 Riboflavin kinase N4T38_19990 PF00133 tRNA synthetases class I (I, L, M and V) N4T38_19990 PF06827 Zinc finger found in FPG and IleRS N4T38_19990 PF08264 Anticodon-binding domain of tRNA N4T38_19995 PF01252 Signal peptidase (SPase) II N4T38_20000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T38_20040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N4T38_20045 PF07859 alpha/beta hydrolase fold N4T38_20065 PF03466 LysR substrate binding domain N4T38_20065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T38_20070 PF01025 GrpE N4T38_20075 PF00012 Hsp70 protein N4T38_20095 PF13406 Transglycosylase SLT domain N4T38_20100 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain N4T38_20100 PF02222 ATP-grasp domain N4T38_20105 PF00731 AIR carboxylase N4T38_20115 PF01225 Mur ligase family, catalytic domain N4T38_20115 PF02875 Mur ligase family, glutamate ligase domain N4T38_20115 PF08245 Mur ligase middle domain N4T38_20125 PF01569 PAP2 superfamily N4T38_20130 PF03741 Integral membrane protein TerC family N4T38_20140 PF03738 Glutathionylspermidine synthase preATP-grasp N4T38_20145 PF00355 Rieske [2Fe-2S] domain N4T38_20150 PF01979 Amidohydrolase family N4T38_20155 PF00156 Phosphoribosyl transferase domain N4T38_20165 PF13098 Thioredoxin-like domain N4T38_20165 PF10411 Disulfide bond isomerase protein N-terminus N4T38_20170 PF01545 Cation efflux family N4T38_20170 PF16916 Dimerisation domain of Zinc Transporter N4T38_20175 PF02583 Metal-sensitive transcriptional repressor N4T38_20180 PF01926 50S ribosome-binding GTPase N4T38_20180 PF12631 MnmE helical domain N4T38_20180 PF10396 GTP-binding protein TrmE N-terminus N4T38_20185 PF02096 60Kd inner membrane protein N4T38_20185 PF14849 YidC periplasmic domain N4T38_20190 PF01809 Putative membrane protein insertion efficiency factor N4T38_20195 PF00825 Ribonuclease P N4T38_20200 PF00468 Ribosomal protein L34 N4T38_20265 PF01435 Peptidase family M48 N4T38_20435 PF01545 Cation efflux family N4T38_20435 PF16916 Dimerisation domain of Zinc Transporter N4T38_20450 PF02321 Outer membrane efflux protein N4T38_20455 PF00873 AcrB/AcrD/AcrF family N4T38_20460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T38_20460 PF00529 HlyD membrane-fusion protein of T1SS N4T38_20465 PF01545 Cation efflux family N4T38_20475 PF01022 Bacterial regulatory protein, arsR family N4T38_20480 PF00403 Heavy-metal-associated domain N4T38_20485 PF09278 MerR, DNA binding N4T38_20485 PF00376 MerR family regulatory protein N4T38_20510 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T38_20565 PF13361 UvrD-like helicase C-terminal domain N4T38_20565 PF00580 UvrD/REP helicase N-terminal domain N4T38_20595 PF13614 AAA domain N4T38_20600 PF02195 ParB-like nuclease domain N4T38_20600 PF17762 HTH domain found in ParB protein N4T38_20620 PF00437 Type II/IV secretion system protein N4T38_20715 PF13495 Phage integrase, N-terminal SAM-like domain N4T38_20715 PF00589 Phage integrase family N4T38_20720 PF01494 FAD binding domain N4T38_20725 PF00239 Resolvase, N terminal domain N4T38_20725 PF02796 Helix-turn-helix domain of resolvase N4T38_20745 PF00809 Pterin binding enzyme N4T38_20815 PF13359 DDE superfamily endonuclease N4T38_20815 PF13613 Helix-turn-helix of DDE superfamily endonuclease N4T38_20840 PF07859 alpha/beta hydrolase fold N4T38_20845 PF08240 Alcohol dehydrogenase GroES-like domain N4T38_20845 PF00107 Zinc-binding dehydrogenase N4T38_20850 PF00171 Aldehyde dehydrogenase family N4T38_20855 PF00158 Sigma-54 interaction domain N4T38_20855 PF13426 PAS domain N4T38_20855 PF02954 Bacterial regulatory protein, Fis family N4T38_20860 PF01494 FAD binding domain N4T38_20865 PF07690 Major Facilitator Superfamily N4T38_20875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T38_20875 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T38_20890 PF01526 Tn3 transposase DDE domain N4T38_20890 PF13700 Domain of unknown function (DUF4158) N4T38_20900 PF00239 Resolvase, N terminal domain N4T38_20900 PF02796 Helix-turn-helix domain of resolvase N4T38_20905 PF01636 Phosphotransferase enzyme family N4T38_20910 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase N4T38_20930 PF00665 Integrase core domain N4T38_20930 PF13936 Helix-turn-helix domain N4T38_20935 PF05973 Phage derived protein Gp49-like (DUF891) N4T38_20940 PF01381 Helix-turn-helix N4T38_20960 PF00005 ABC transporter N4T38_20960 PF12848 ABC transporter N4T38_20965 PF01636 Phosphotransferase enzyme family N4T38_20970 PF02796 Helix-turn-helix domain of resolvase N4T38_20970 PF00239 Resolvase, N terminal domain N4T38_21105 PF00717 Peptidase S24-like N4T38_21110 PF11798 IMS family HHH motif N4T38_21110 PF11799 impB/mucB/samB family C-terminal domain N4T38_21110 PF00817 impB/mucB/samB family N4T38_21110 PF13438 Domain of unknown function (DUF4113) N4T38_21120 PF00589 Phage integrase family N4T38_21120 PF13495 Phage integrase, N-terminal SAM-like domain N4T38_21135 PF00893 Small Multidrug Resistance protein N4T38_21140 PF00809 Pterin binding enzyme N4T38_21185 PF00665 Integrase core domain N4T38_21185 PF13936 Helix-turn-helix domain N4T38_21220 PF00313 'Cold-shock' DNA-binding domain N4T38_21260 PF00753 Metallo-beta-lactamase superfamily N4T38_21265 PF13936 Helix-turn-helix domain N4T38_21265 PF00665 Integrase core domain N4T38_21270 PF01636 Phosphotransferase enzyme family N4T38_21290 PF02661 Fic/DOC family N4T38_21290 PF17841 BID domain of Bartonella effector protein (Bep) N4T38_21385 PF00176 SNF2 family N-terminal domain N4T38_21385 PF18337 RapA N-terminal Tudor like domain N4T38_21385 PF18339 RapA N-terminal Tudor like domain 1 N4T38_21385 PF12137 RNA polymerase recycling family C-terminal N4T38_21385 PF00271 Helicase conserved C-terminal domain N4T38_21440 PF00565 Staphylococcal nuclease homologue N4T38_21450 PF01555 DNA methylase N4T38_21470 PF13817 IS66 C-terminal element N4T38_21470 PF13007 Transposase C of IS166 homeodomain N4T38_21470 PF13005 zinc-finger binding domain of transposase IS66 N4T38_21470 PF03050 Transposase IS66 family N4T38_21510 PF00107 Zinc-binding dehydrogenase N4T38_21510 PF08240 Alcohol dehydrogenase GroES-like domain N4T38_21530 PF01396 Topoisomerase DNA binding C4 zinc finger N4T38_21530 PF01131 DNA topoisomerase N4T38_21530 PF01751 Toprim domain N4T38_21610 PF03050 Transposase IS66 family N4T38_21610 PF13817 IS66 C-terminal element N4T38_21610 PF13007 Transposase C of IS166 homeodomain N4T38_21610 PF13005 zinc-finger binding domain of transposase IS66 N4T38_21635 PF02899 Phage integrase, N-terminal SAM-like domain N4T38_21635 PF00589 Phage integrase family N4T38_21660 PF01520 N-acetylmuramoyl-L-alanine amidase N4T38_21660 PF08239 Bacterial SH3 domain N4T38_21680 PF00905 Penicillin binding protein transpeptidase domain N4T38_21690 PF00072 Response regulator receiver domain N4T38_21690 PF00486 Transcriptional regulatory protein, C terminal N4T38_21695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T38_21695 PF00512 His Kinase A (phospho-acceptor) domain N4T38_21695 PF18698 Histidine kinase sensor domain N4T38_21695 PF00989 PAS fold N4T38_21695 PF00672 HAMP domain N4T38_21700 PF07690 Major Facilitator Superfamily N4T38_21705 PF00873 AcrB/AcrD/AcrF family N4T38_21710 PF00529 HlyD membrane-fusion protein of T1SS N4T38_21710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T38_21725 PF02796 Helix-turn-helix domain of resolvase N4T38_21725 PF00239 Resolvase, N terminal domain N4T38_21730 PF13610 DDE domain N4T38_21740 PF03050 Transposase IS66 family N4T38_21740 PF13005 zinc-finger binding domain of transposase IS66 N4T38_21740 PF13007 Transposase C of IS166 homeodomain N4T38_21740 PF13817 IS66 C-terminal element N4T38_21775 PF00962 Adenosine/AMP deaminase N4T38_21785 PF13005 zinc-finger binding domain of transposase IS66 N4T38_21785 PF13007 Transposase C of IS166 homeodomain N4T38_21785 PF13817 IS66 C-terminal element N4T38_21785 PF03050 Transposase IS66 family N4T38_21845 PF00905 Penicillin binding protein transpeptidase domain N4T38_21855 PF03389 MobA/MobL family