locus-tag class description N4T40_00180 PF01695 IstB-like ATP binding protein N4T40_00285 PF00696 Amino acid kinase family N4T40_00285 PF01842 ACT domain N4T40_00285 PF13840 ACT domain N4T40_00290 PF02599 Global regulator protein family N4T40_00295 PF01351 Ribonuclease HII N4T40_00305 PF01292 Prokaryotic cytochrome b561 N4T40_00310 PF00962 Adenosine/AMP deaminase N4T40_00315 PF00860 Permease family N4T40_00325 PF00743 Flavin-binding monooxygenase-like N4T40_00330 PF00106 short chain dehydrogenase N4T40_00340 PF02678 Pirin N4T40_00340 PF17954 Quercetinase C-terminal cupin domain N4T40_00345 PF17932 Tetracyclin repressor-like, C-terminal domain N4T40_00345 PF00440 Bacterial regulatory proteins, tetR family N4T40_00355 PF00106 short chain dehydrogenase N4T40_00365 PF04072 Leucine carboxyl methyltransferase N4T40_00370 PF12833 Helix-turn-helix domain N4T40_00370 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term N4T40_00375 PF00743 Flavin-binding monooxygenase-like N4T40_00380 PF00106 short chain dehydrogenase N4T40_00385 PF07859 alpha/beta hydrolase fold N4T40_00390 PF05199 GMC oxidoreductase N4T40_00400 PF07690 Major Facilitator Superfamily N4T40_00405 PF00884 Sulfatase N4T40_00410 PF03781 Sulfatase-modifying factor enzyme 1 N4T40_00420 PF00355 Rieske [2Fe-2S] domain N4T40_00425 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T40_00425 PF00175 Oxidoreductase NAD-binding domain N4T40_00440 PF13737 Transposase DDE domain N4T40_00465 PF13356 Arm DNA-binding domain N4T40_00465 PF00589 Phage integrase family N4T40_00475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T40_00475 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_00480 PF00764 Arginosuccinate synthase N4T40_00490 PF01979 Amidohydrolase family N4T40_00495 PF00929 Exonuclease N4T40_00505 PF00593 TonB dependent receptor N4T40_00505 PF07715 TonB-dependent Receptor Plug Domain N4T40_00510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T40_00510 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_00515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4T40_00515 PF00005 ABC transporter N4T40_00520 PF12911 N-terminal TM domain of oligopeptide transport permease C N4T40_00520 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_00530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N4T40_00535 PF01464 Transglycosylase SLT domain N4T40_00535 PF01476 LysM domain N4T40_00535 PF01464 Transglycosylase SLT domain N4T40_00535 PF01476 LysM domain N4T40_00540 PF00929 Exonuclease N4T40_00565 PF00293 NUDIX domain N4T40_00565 PF09297 NADH pyrophosphatase zinc ribbon domain N4T40_00575 PF04972 BON domain N4T40_00580 PF02021 Uncharacterised protein family UPF0102 N4T40_00585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N4T40_00595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_00595 PF03466 LysR substrate binding domain N4T40_00600 PF01810 LysE type translocator N4T40_00610 PF13411 MerR HTH family regulatory protein N4T40_00620 PF01494 FAD binding domain N4T40_00625 PF01494 FAD binding domain N4T40_00630 PF05195 Aminopeptidase P, N-terminal domain N4T40_00630 PF00557 Metallopeptidase family M24 N4T40_00660 PF13737 Transposase DDE domain N4T40_00670 PF08019 Phosphoethanolamine transferase EptA/EptB N4T40_00670 PF00884 Sulfatase N4T40_00715 PF01551 Peptidase family M23 N4T40_00715 PF10145 Phage-related minor tail protein N4T40_00715 PF01464 Transglycosylase SLT domain N4T40_01010 PF01812 5-formyltetrahydrofolate cyclo-ligase family N4T40_01015 PF00691 OmpA family N4T40_01015 PF04355 SmpA / OmlA family N4T40_01020 PF03895 YadA-like membrane anchor domain N4T40_01020 PF05658 Head domain of trimeric autotransporter adhesin N4T40_01020 PF13018 Extended Signal Peptide of Type V secretion system N4T40_01020 PF05662 Coiled stalk of trimeric autotransporter adhesin N4T40_01030 PF05362 Lon protease (S16) C-terminal proteolytic domain N4T40_01030 PF02190 ATP-dependent protease La (LON) substrate-binding domain N4T40_01030 PF00004 ATPase family associated with various cellular activities (AAA) N4T40_01035 PF02590 Predicted SPOUT methyltransferase N4T40_01040 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase N4T40_01050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase N4T40_01050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain N4T40_01055 PF04060 Putative Fe-S cluster N4T40_01060 PF10576 Iron-sulfur binding domain of endonuclease III N4T40_01060 PF00730 HhH-GPD superfamily base excision DNA repair protein N4T40_01060 PF00633 Helix-hairpin-helix motif N4T40_01070 PF05191 Adenylate kinase, active site lid N4T40_01085 PF00905 Penicillin binding protein transpeptidase domain N4T40_01085 PF03717 Penicillin-binding Protein dimerisation domain N4T40_01100 PF02492 CobW/HypB/UreG, nucleotide-binding domain N4T40_01105 PF01730 UreF N4T40_01110 PF02814 UreE urease accessory protein, N-terminal domain N4T40_01110 PF05194 UreE urease accessory protein, C-terminal domain N4T40_01115 PF00449 Urease alpha-subunit, N-terminal domain N4T40_01115 PF01979 Amidohydrolase family N4T40_01125 PF00699 Urease beta subunit N4T40_01130 PF00547 Urease, gamma subunit N4T40_01135 PF01774 UreD urease accessory protein N4T40_01150 PF00463 Isocitrate lyase family N4T40_01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_01155 PF03466 LysR substrate binding domain N4T40_01160 PF00571 CBS domain N4T40_01160 PF03471 Transporter associated domain N4T40_01160 PF01595 Cyclin M transmembrane N-terminal domain N4T40_01165 PF03600 Citrate transporter N4T40_01180 PF00009 Elongation factor Tu GTP binding domain N4T40_01185 PF01507 Phosphoadenosine phosphosulfate reductase family N4T40_01195 PF14052 Capsule assembly protein Wzi N4T40_01205 PF00152 tRNA synthetases class II (D, K and N) N4T40_01205 PF01336 OB-fold nucleic acid binding domain N4T40_01220 PF00301 Rubredoxin N4T40_01225 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_01225 PF18113 Rubredoxin binding C-terminal domain N4T40_01230 PF00561 alpha/beta hydrolase fold N4T40_01235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_01235 PF03466 LysR substrate binding domain N4T40_01250 PF13090 Polyphosphate kinase C-terminal domain 2 N4T40_01250 PF17941 Polyphosphate kinase C-terminal domain 1 N4T40_01250 PF13089 Polyphosphate kinase N-terminal domain N4T40_01250 PF02503 Polyphosphate kinase middle domain N4T40_01255 PF00912 Transglycosylase N4T40_01260 PF01694 Rhomboid family N4T40_01270 PF00005 ABC transporter N4T40_01275 PF13472 GDSL-like Lipase/Acylhydrolase family N4T40_01280 PF00484 Carbonic anhydrase N4T40_01285 PF00561 alpha/beta hydrolase fold N4T40_01295 PF00593 TonB dependent receptor N4T40_01295 PF07715 TonB-dependent Receptor Plug Domain N4T40_01300 PF01521 Iron-sulphur cluster biosynthesis N4T40_01300 PF01106 NifU-like domain N4T40_01310 PF00884 Sulfatase N4T40_01315 PF03781 Sulfatase-modifying factor enzyme 1 N4T40_01330 PF00291 Pyridoxal-phosphate dependent enzyme N4T40_01335 PF01384 Phosphate transporter family N4T40_01340 PF02310 B12 binding domain N4T40_01340 PF02607 B12 binding domain N4T40_01340 PF02965 Vitamin B12 dependent methionine synthase, activation domain N4T40_01340 PF00809 Pterin binding enzyme N4T40_01340 PF02574 Homocysteine S-methyltransferase N4T40_01345 PF02779 Transketolase, pyrimidine binding domain N4T40_01345 PF02780 Transketolase, C-terminal domain N4T40_01350 PF00456 Transketolase, thiamine diphosphate binding domain N4T40_01355 PF07690 Major Facilitator Superfamily N4T40_01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_01365 PF03466 LysR substrate binding domain N4T40_01375 PF01263 Aldose 1-epimerase N4T40_01380 PF07690 Major Facilitator Superfamily N4T40_01385 PF02311 AraC-like ligand binding domain N4T40_01385 PF12833 Helix-turn-helix domain N4T40_01390 PF04960 Glutaminase N4T40_01395 PF01327 Polypeptide deformylase N4T40_01400 PF07690 Major Facilitator Superfamily N4T40_01410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4T40_01410 PF00205 Thiamine pyrophosphate enzyme, central domain N4T40_01410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4T40_01415 PF00171 Aldehyde dehydrogenase family N4T40_01420 PF03447 Homoserine dehydrogenase, NAD binding domain N4T40_01420 PF01958 Domain of unknown function DUF108 N4T40_01440 PF07690 Major Facilitator Superfamily N4T40_01445 PF14759 Reductase C-terminal N4T40_01445 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_01450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T40_01460 PF00355 Rieske [2Fe-2S] domain N4T40_01470 PF00355 Rieske [2Fe-2S] domain N4T40_01475 PF09339 IclR helix-turn-helix domain N4T40_01475 PF01614 Bacterial transcriptional regulator N4T40_01490 PF00378 Enoyl-CoA hydratase/isomerase N4T40_01500 PF00535 Glycosyl transferase family 2 N4T40_01505 PF14883 Hypothetical glycosyl hydrolase family 13 N4T40_01505 PF01522 Polysaccharide deacetylase N4T40_01510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T40_01515 PF07152 YaeQ protein N4T40_01520 PF00375 Sodium:dicarboxylate symporter family N4T40_01525 PF07683 Cobalamin synthesis protein cobW C-terminal domain N4T40_01525 PF02492 CobW/HypB/UreG, nucleotide-binding domain N4T40_01535 PF03061 Thioesterase superfamily N4T40_01545 PF02028 BCCT, betaine/carnitine/choline family transporter N4T40_01550 PF02028 BCCT, betaine/carnitine/choline family transporter N4T40_01555 PF00440 Bacterial regulatory proteins, tetR family N4T40_01555 PF13977 BetI-type transcriptional repressor, C-terminal N4T40_01560 PF00171 Aldehyde dehydrogenase family N4T40_01565 PF05199 GMC oxidoreductase N4T40_01565 PF00732 GMC oxidoreductase N4T40_01570 PF06039 Malate:quinone oxidoreductase (Mqo) N4T40_01585 PF13520 Amino acid permease N4T40_01610 PF01126 Heme oxygenase N4T40_01620 PF04575 Protein of unknown function (DUF560) N4T40_01630 PF07715 TonB-dependent Receptor Plug Domain N4T40_01630 PF00593 TonB dependent receptor N4T40_01640 PF04542 Sigma-70 region 2 N4T40_01640 PF08281 Sigma-70, region 4 N4T40_01650 PF00701 Dihydrodipicolinate synthetase family N4T40_01655 PF00083 Sugar (and other) transporter N4T40_01665 PF00271 Helicase conserved C-terminal domain N4T40_01665 PF08463 EcoEI R protein C-terminal N4T40_01665 PF04851 Type III restriction enzyme, res subunit N4T40_01665 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N4T40_01675 PF12161 HsdM N-terminal domain N4T40_01675 PF02384 N-6 DNA Methylase N4T40_01740 PF07690 Major Facilitator Superfamily N4T40_01745 PF13533 Biotin-lipoyl like N4T40_01750 PF03061 Thioesterase superfamily N4T40_01755 PF00490 Delta-aminolevulinic acid dehydratase N4T40_01760 PF01266 FAD dependent oxidoreductase N4T40_01765 PF01370 NAD dependent epimerase/dehydratase family N4T40_01765 PF08338 Domain of unknown function (DUF1731) N4T40_01785 PF12320 Type 5 capsule protein repressor C-terminal domain N4T40_01785 PF00149 Calcineurin-like phosphoesterase N4T40_01795 PF01168 Alanine racemase, N-terminal domain N4T40_01800 PF00437 Type II/IV secretion system protein N4T40_01805 PF00437 Type II/IV secretion system protein N4T40_01810 PF01475 Ferric uptake regulator family N4T40_01815 PF04355 SmpA / OmlA family N4T40_01820 PF03658 RnfH family Ubiquitin N4T40_01830 PF01814 Hemerythrin HHE cation binding domain N4T40_01835 PF13230 Glutamine amidotransferases class-II N4T40_01845 PF00696 Amino acid kinase family N4T40_01850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T40_01850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T40_01850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T40_01850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T40_01855 PF00692 dUTPase N4T40_01860 PF00580 UvrD/REP helicase N-terminal domain N4T40_01860 PF13361 UvrD-like helicase C-terminal domain N4T40_01865 PF00691 OmpA family N4T40_01865 PF13488 Glycine zipper N4T40_01870 PF01553 Acyltransferase N4T40_01880 PF03775 Septum formation inhibitor MinC, C-terminal domain N4T40_01885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N4T40_01890 PF03776 Septum formation topological specificity factor MinE N4T40_01900 PF01810 LysE type translocator N4T40_01905 PF09397 Ftsk gamma domain N4T40_01905 PF01580 FtsK/SpoIIIE family N4T40_01905 PF17854 FtsK alpha domain N4T40_01905 PF13491 4TM region of DNA translocase FtsK/SpoIIIE N4T40_01910 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_01915 PF03588 Leucyl/phenylalanyl-tRNA protein transferase N4T40_01920 PF04376 Arginine-tRNA-protein transferase, N terminus N4T40_01920 PF04377 Arginine-tRNA-protein transferase, C terminus N4T40_01925 PF00583 Acetyltransferase (GNAT) family N4T40_01940 PF03143 Elongation factor Tu C-terminal domain N4T40_01940 PF00009 Elongation factor Tu GTP binding domain N4T40_01940 PF03144 Elongation factor Tu domain 2 N4T40_01945 PF03144 Elongation factor Tu domain 2 N4T40_01945 PF14492 Elongation Factor G, domain II N4T40_01945 PF03764 Elongation factor G, domain IV N4T40_01945 PF00679 Elongation factor G C-terminus N4T40_01945 PF00009 Elongation factor Tu GTP binding domain N4T40_01950 PF00177 Ribosomal protein S7p/S5e N4T40_01955 PF00164 Ribosomal protein S12/S23 N4T40_01965 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T40_01965 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T40_01970 PF03653 Uncharacterised protein family (UPF0093) N4T40_01975 PF05726 Pirin C-terminal cupin domain N4T40_01975 PF02678 Pirin N4T40_01985 PF00795 Carbon-nitrogen hydrolase N4T40_01985 PF02540 NAD synthase N4T40_02000 PF00175 Oxidoreductase NAD-binding domain N4T40_02000 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T40_02000 PF00970 Oxidoreductase FAD-binding domain N4T40_02005 PF00171 Aldehyde dehydrogenase family N4T40_02010 PF00848 Ring hydroxylating alpha subunit (catalytic domain) N4T40_02010 PF00355 Rieske [2Fe-2S] domain N4T40_02015 PF07859 alpha/beta hydrolase fold N4T40_02020 PF02028 BCCT, betaine/carnitine/choline family transporter N4T40_02025 PF00180 Isocitrate/isopropylmalate dehydrogenase N4T40_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_02030 PF03466 LysR substrate binding domain N4T40_02050 PF00037 4Fe-4S binding domain N4T40_02055 PF01467 Cytidylyltransferase-like N4T40_02060 PF13356 Arm DNA-binding domain N4T40_02060 PF00589 Phage integrase family N4T40_02140 PF01551 Peptidase family M23 N4T40_02140 PF01476 LysM domain N4T40_02140 PF08525 Opacity-associated protein A N-terminal motif N4T40_02150 PF08346 AntA/AntB antirepressor N4T40_02150 PF10548 P22AR C-terminal domain N4T40_02370 PF00772 DnaB-like helicase N terminal domain N4T40_02370 PF03796 DnaB-like helicase C terminal domain N4T40_02400 PF01381 Helix-turn-helix N4T40_02430 PF06630 Enterobacterial exodeoxyribonuclease VIII N4T40_02430 PF12684 PDDEXK-like domain of unknown function (DUF3799) N4T40_02465 PF01668 SmpB protein N4T40_02470 PF03358 NADPH-dependent FMN reductase N4T40_02475 PF02578 Multi-copper polyphenol oxidoreductase laccase N4T40_02480 PF00849 RNA pseudouridylate synthase N4T40_02480 PF01479 S4 domain N4T40_02485 PF13525 Outer membrane lipoprotein N4T40_02490 PF01807 CHC2 zinc finger N4T40_02490 PF08278 DNA primase DnaG DnaB-binding N4T40_02490 PF10410 DnaB-helicase binding domain of primase N4T40_02490 PF08275 DNA primase catalytic core, N-terminal domain N4T40_02495 PF01488 Shikimate / quinate 5-dehydrogenase N4T40_02495 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N4T40_02495 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N4T40_02505 PF03550 Outer membrane lipoprotein LolB N4T40_02510 PF00288 GHMP kinases N terminal domain N4T40_02510 PF08544 GHMP kinases C terminal N4T40_02535 PF14572 Phosphoribosyl synthetase-associated domain N4T40_02535 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N4T40_02540 PF01386 Ribosomal L25p family N4T40_02545 PF01195 Peptidyl-tRNA hydrolase N4T40_02550 PF02261 Aspartate decarboxylase N4T40_02565 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N4T40_02575 PF08543 Phosphomethylpyrimidine kinase N4T40_02575 PF03070 TENA/THI-4/PQQC family N4T40_02575 PF02581 Thiamine monophosphate synthase N4T40_02580 PF04972 BON domain N4T40_02580 PF01476 LysM domain N4T40_02585 PF00550 Phosphopantetheine attachment site N4T40_02595 PF00698 Acyl transferase domain N4T40_02600 PF01783 Ribosomal L32p protein family N4T40_02605 PF02620 Large ribosomal RNA subunit accumulation protein YceD N4T40_02610 PF04315 Elongation factor P hydroxylase N4T40_02615 PF01300 Telomere recombination N4T40_02620 PF02616 Segregation and condensation protein ScpA N4T40_02625 PF04079 Segregation and condensation complex subunit ScpB N4T40_02630 PF00849 RNA pseudouridylate synthase N4T40_02630 PF01479 S4 domain N4T40_02645 PF00155 Aminotransferase class I and II N4T40_02650 PF04055 Radical SAM superfamily N4T40_02650 PF06968 Biotin and Thiamin Synthesis associated domain N4T40_02650 PF00202 Aminotransferase class-III N4T40_02655 PF08241 Methyltransferase domain N4T40_02655 PF12697 Alpha/beta hydrolase family N4T40_02660 PF02358 Trehalose-phosphatase N4T40_02665 PF00982 Glycosyltransferase family 20 N4T40_02670 PF07690 Major Facilitator Superfamily N4T40_02675 PF00210 Ferritin-like domain N4T40_02680 PF03119 NAD-dependent DNA ligase C4 zinc finger domain N4T40_02680 PF00533 BRCA1 C Terminus (BRCT) domain N4T40_02680 PF12826 Helix-hairpin-helix motif N4T40_02680 PF03120 NAD-dependent DNA ligase OB-fold domain N4T40_02680 PF01653 NAD-dependent DNA ligase adenylation domain N4T40_02690 PF02463 RecF/RecN/SMC N terminal domain N4T40_02690 PF06470 SMC proteins Flexible Hinge Domain N4T40_02700 PF01925 Sulfite exporter TauE/SafE N4T40_02710 PF03309 Type III pantothenate kinase N4T40_02715 PF02881 SRP54-type protein, helical bundle domain N4T40_02715 PF02978 Signal peptide binding domain N4T40_02715 PF00448 SRP54-type protein, GTPase domain N4T40_02725 PF01207 Dihydrouridine synthase (Dus) N4T40_02755 PF00692 dUTPase N4T40_02775 PF01636 Phosphotransferase enzyme family N4T40_02780 PF13936 Helix-turn-helix domain N4T40_02780 PF00665 Integrase core domain N4T40_02805 PF00004 ATPase family associated with various cellular activities (AAA) N4T40_02815 PF01965 DJ-1/PfpI family N4T40_02820 PF08659 KR domain N4T40_02820 PF14765 Polyketide synthase dehydratase N4T40_02820 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T40_02820 PF16197 Ketoacyl-synthetase C-terminal extension N4T40_02820 PF00550 Phosphopantetheine attachment site N4T40_02820 PF09277 Erythronolide synthase, docking N4T40_02820 PF08990 Erythronolide synthase docking N4T40_02820 PF08240 Alcohol dehydrogenase GroES-like domain N4T40_02820 PF00698 Acyl transferase domain N4T40_02820 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T40_02825 PF06719 AraC-type transcriptional regulator N-terminus N4T40_02825 PF12833 Helix-turn-helix domain N4T40_02830 PF02673 Bacitracin resistance protein BacA N4T40_02850 PF02525 Flavodoxin-like fold N4T40_02865 PF01507 Phosphoadenosine phosphosulfate reductase family N4T40_02870 PF06974 Protein of unknown function (DUF1298) N4T40_02870 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain N4T40_02880 PF00575 S1 RNA binding domain N4T40_02880 PF10150 Ribonuclease E/G family N4T40_02885 PF02545 Maf-like protein N4T40_02890 PF04093 rod shape-determining protein MreD N4T40_02895 PF04085 rod shape-determining protein MreC N4T40_02905 PF02686 Glu-tRNAGln amidotransferase C subunit N4T40_02910 PF01425 Amidase N4T40_02915 PF02637 GatB domain N4T40_02915 PF02934 GatB/GatE catalytic domain N4T40_02940 PF05649 Peptidase family M13 N4T40_02940 PF01431 Peptidase family M13 N4T40_02945 PF05992 SbmA/BacA-like family N4T40_02950 PF00291 Pyridoxal-phosphate dependent enzyme N4T40_02950 PF13291 ACT domain N4T40_02955 PF01734 Patatin-like phospholipase N4T40_02960 PF01235 Sodium:alanine symporter family N4T40_02975 PF00881 Nitroreductase family N4T40_02980 PF07690 Major Facilitator Superfamily N4T40_02985 PF12805 FUSC-like inner membrane protein yccS N4T40_02995 PF00258 Flavodoxin N4T40_02995 PF00667 FAD binding domain N4T40_02995 PF00175 Oxidoreductase NAD-binding domain N4T40_03035 PF03734 L,D-transpeptidase catalytic domain N4T40_03035 PF17969 L,D-transpeptidase C-terminal domain N4T40_03040 PF04304 Protein of unknown function (DUF454) N4T40_03050 PF08085 Entericidin EcnA/B family N4T40_03055 PF07687 Peptidase dimerisation domain N4T40_03055 PF01546 Peptidase family M20/M25/M40 N4T40_03070 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term N4T40_03070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4T40_03075 PF01584 CheW-like domain N4T40_03080 PF00072 Response regulator receiver domain N4T40_03085 PF00072 Response regulator receiver domain N4T40_03100 PF00873 AcrB/AcrD/AcrF family N4T40_03105 PF03129 Anticodon binding domain N4T40_03105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4T40_03105 PF04073 Aminoacyl-tRNA editing domain N4T40_03110 PF07411 Domain of unknown function (DUF1508) N4T40_03115 PF03831 PhnA domain N4T40_03115 PF08274 PhnA Zinc-Ribbon N4T40_03120 PF04343 Protein of unknown function, DUF488 N4T40_03130 PF01571 Aminomethyltransferase folate-binding domain N4T40_03135 PF13098 Thioredoxin-like domain N4T40_03135 PF10411 Disulfide bond isomerase protein N-terminus N4T40_03145 PF03547 Membrane transport protein N4T40_03150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T40_03155 PF00593 TonB dependent receptor N4T40_03155 PF07715 TonB-dependent Receptor Plug Domain N4T40_03160 PF02245 Methylpurine-DNA glycosylase (MPG) N4T40_03165 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N4T40_03165 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N4T40_03165 PF06827 Zinc finger found in FPG and IleRS N4T40_03180 PF01741 Large-conductance mechanosensitive channel, MscL N4T40_03185 PF00009 Elongation factor Tu GTP binding domain N4T40_03185 PF03144 Elongation factor Tu domain 2 N4T40_03185 PF00679 Elongation factor G C-terminus N4T40_03190 PF00860 Permease family N4T40_03195 PF05175 Methyltransferase small domain N4T40_03195 PF08468 Methyltransferase small domain N-terminal N4T40_03200 PF00324 Amino acid permease N4T40_03205 PF01139 tRNA-splicing ligase RtcB N4T40_03215 PF13505 Outer membrane protein beta-barrel domain N4T40_03215 PF00691 OmpA family N4T40_03225 PF00108 Thiolase, N-terminal domain N4T40_03225 PF02803 Thiolase, C-terminal domain N4T40_03235 PF00893 Small Multidrug Resistance protein N4T40_03245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N4T40_03245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N4T40_03250 PF01011 PQQ enzyme repeat N4T40_03255 PF04966 Carbohydrate-selective porin, OprB family N4T40_03260 PF02515 CoA-transferase family III N4T40_03265 PF02311 AraC-like ligand binding domain N4T40_03265 PF12833 Helix-turn-helix domain N4T40_03270 PF02803 Thiolase, C-terminal domain N4T40_03270 PF00108 Thiolase, N-terminal domain N4T40_03275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T40_03275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T40_03275 PF00378 Enoyl-CoA hydratase/isomerase N4T40_03300 PF03006 Haemolysin-III related N4T40_03305 PF07690 Major Facilitator Superfamily N4T40_03305 PF00083 Sugar (and other) transporter N4T40_03315 PF01043 SecA preprotein cross-linking domain N4T40_03315 PF02810 SEC-C motif N4T40_03315 PF07516 SecA Wing and Scaffold domain N4T40_03315 PF07517 SecA DEAD-like domain N4T40_03320 PF10417 C-terminal domain of 1-Cys peroxiredoxin N4T40_03320 PF00578 AhpC/TSA family N4T40_03325 PF00753 Metallo-beta-lactamase superfamily N4T40_03340 PF02875 Mur ligase family, glutamate ligase domain N4T40_03340 PF08245 Mur ligase middle domain N4T40_03345 PF01039 Carboxyl transferase domain N4T40_03350 PF00290 Tryptophan synthase alpha chain N4T40_03375 PF00291 Pyridoxal-phosphate dependent enzyme N4T40_03380 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N4T40_03385 PF00593 TonB dependent receptor N4T40_03385 PF07715 TonB-dependent Receptor Plug Domain N4T40_03390 PF01923 Cobalamin adenosyltransferase N4T40_03395 PF03009 Glycerophosphoryl diester phosphodiesterase family N4T40_03410 PF02696 Uncharacterized ACR, YdiU/UPF0061 family N4T40_03415 PF00072 Response regulator receiver domain N4T40_03415 PF00486 Transcriptional regulatory protein, C terminal N4T40_03420 PF00672 HAMP domain N4T40_03420 PF00512 His Kinase A (phospho-acceptor) domain N4T40_03420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_03430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_03430 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T40_03430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_03430 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_03435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_03435 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_03435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_03435 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T40_03440 PF06146 Phosphate-starvation-inducible E N4T40_03460 PF07715 TonB-dependent Receptor Plug Domain N4T40_03460 PF00593 TonB dependent receptor N4T40_03470 PF02938 GAD domain N4T40_03470 PF00152 tRNA synthetases class II (D, K and N) N4T40_03470 PF01336 OB-fold nucleic acid binding domain N4T40_03475 PF17101 Stealth protein CR1, conserved region 1 N4T40_03475 PF17102 Stealth protein CR3, conserved region 3 N4T40_03475 PF11380 Stealth protein CR2, conserved region 2 N4T40_03485 PF03275 UDP-galactopyranose mutase N4T40_03495 PF00665 Integrase core domain N4T40_03495 PF13936 Helix-turn-helix domain N4T40_03520 PF00534 Glycosyl transferases group 1 N4T40_03520 PF13439 Glycosyltransferase Family 4 N4T40_03525 PF00535 Glycosyl transferase family 2 N4T40_03530 PF01522 Polysaccharide deacetylase N4T40_03545 PF01063 Amino-transferase class IV N4T40_03550 PF08335 GlnD PII-uridylyltransferase N4T40_03550 PF03710 Glutamate-ammonia ligase adenylyltransferase N4T40_03555 PF00072 Response regulator receiver domain N4T40_03555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N4T40_03555 PF00672 HAMP domain N4T40_03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_03555 PF00512 His Kinase A (phospho-acceptor) domain N4T40_03555 PF01627 Hpt domain N4T40_03575 PF04245 37-kD nucleoid-associated bacterial protein N4T40_03590 PF02547 Queuosine biosynthesis protein N4T40_03605 PF01702 Queuine tRNA-ribosyltransferase N4T40_03610 PF02699 Preprotein translocase subunit N4T40_03620 PF07549 SecD/SecF GG Motif N4T40_03620 PF02355 Protein export membrane protein N4T40_03625 PF04127 DNA / pantothenate metabolism flavoprotein N4T40_03625 PF02441 Flavoprotein N4T40_03630 PF04002 RadC-like JAB domain N4T40_03635 PF01062 Bestrophin, RFP-TM, chloride channel N4T40_03645 PF04279 Intracellular septation protein A N4T40_03650 PF03795 YCII-related domain N4T40_03660 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N4T40_03660 PF01266 FAD dependent oxidoreductase N4T40_03670 PF04461 Protein of unknown function (DUF520) N4T40_03680 PF03061 Thioesterase superfamily N4T40_03685 PF00085 Thioredoxin N4T40_03690 PF00561 alpha/beta hydrolase fold N4T40_03695 PF00753 Metallo-beta-lactamase superfamily N4T40_03695 PF04273 Putative phosphatase (DUF442) N4T40_03705 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_03705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T40_03740 PF17152 Periplasmic sensor domain N4T40_03740 PF00990 Diguanylate cyclase, GGDEF domain N4T40_03745 PF00691 OmpA family N4T40_03745 PF01389 OmpA-like transmembrane domain N4T40_03750 PF00149 Calcineurin-like phosphoesterase N4T40_03750 PF10518 TAT (twin-arginine translocation) pathway signal sequence N4T40_03755 PF13091 PLD-like domain N4T40_03765 PF01926 50S ribosome-binding GTPase N4T40_03765 PF16360 GTP-binding GTPase Middle Region N4T40_03765 PF13167 GTP-binding GTPase N-terminal N4T40_03785 PF00149 Calcineurin-like phosphoesterase N4T40_03790 PF00398 Ribosomal RNA adenine dimethylase N4T40_03795 PF04166 Pyridoxal phosphate biosynthetic protein PdxA N4T40_03800 PF00572 Ribosomal protein L13 N4T40_03805 PF00380 Ribosomal protein S9/S16 N4T40_03810 PF00043 Glutathione S-transferase, C-terminal domain N4T40_03810 PF13417 Glutathione S-transferase, N-terminal domain N4T40_03815 PF04386 Stringent starvation protein B N4T40_03825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T40_03825 PF00364 Biotin-requiring enzyme N4T40_03825 PF02785 Biotin carboxylase C-terminal domain N4T40_03825 PF00289 Biotin carboxylase, N-terminal domain N4T40_03830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T40_03830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T40_03830 PF00378 Enoyl-CoA hydratase/isomerase N4T40_03835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_03835 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_03835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_03840 PF01039 Carboxyl transferase domain N4T40_03855 PF00440 Bacterial regulatory proteins, tetR family N4T40_03855 PF17932 Tetracyclin repressor-like, C-terminal domain N4T40_03860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_03860 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_03860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_03905 PF01066 CDP-alcohol phosphatidyltransferase N4T40_03910 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ N4T40_03930 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N4T40_03930 PF00056 lactate/malate dehydrogenase, NAD binding domain N4T40_03940 PF01551 Peptidase family M23 N4T40_03940 PF10145 Phage-related minor tail protein N4T40_03940 PF01464 Transglycosylase SLT domain N4T40_03945 PF00919 Uncharacterized protein family UPF0004 N4T40_03945 PF01938 TRAM domain N4T40_03945 PF04055 Radical SAM superfamily N4T40_03950 PF02562 PhoH-like protein N4T40_03955 PF02130 Uncharacterized protein family UPF0054 N4T40_03980 PF03358 NADPH-dependent FMN reductase N4T40_03985 PF03631 Virulence factor BrkB N4T40_03990 PF00892 EamA-like transporter family N4T40_04000 PF01557 Fumarylacetoacetate (FAA) hydrolase family N4T40_04045 PF00575 S1 RNA binding domain N4T40_04045 PF00773 RNB domain N4T40_04045 PF08206 Ribonuclease B OB domain N4T40_04045 PF08461 Ribonuclease R winged-helix domain N4T40_04045 PF17876 Cold shock domain N4T40_04050 PF01432 Peptidase family M3 N4T40_04055 PF09526 Probable metal-binding protein (DUF2387) N4T40_04085 PF03937 Flavinator of succinate dehydrogenase N4T40_04090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_04090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_04090 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_04095 PF00743 Flavin-binding monooxygenase-like N4T40_04100 PF01196 Ribosomal protein L17 N4T40_04105 PF01000 RNA polymerase Rpb3/RpoA insert domain N4T40_04105 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain N4T40_04105 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain N4T40_04110 PF01479 S4 domain N4T40_04110 PF00163 Ribosomal protein S4/S9 N-terminal domain N4T40_04115 PF00411 Ribosomal protein S11 N4T40_04120 PF00416 Ribosomal protein S13/S18 N4T40_04125 PF00444 Ribosomal protein L36 N4T40_04130 PF00344 SecY translocase N4T40_04135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A N4T40_04140 PF00327 Ribosomal protein L30p/L7e N4T40_04145 PF03719 Ribosomal protein S5, C-terminal domain N4T40_04145 PF00333 Ribosomal protein S5, N-terminal domain N4T40_04150 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast N4T40_04155 PF00347 Ribosomal protein L6 N4T40_04160 PF00410 Ribosomal protein S8 N4T40_04165 PF00253 Ribosomal protein S14p/S29e N4T40_04170 PF00281 Ribosomal protein L5 N4T40_04170 PF00673 ribosomal L5P family C-terminus N4T40_04175 PF00467 KOW motif N4T40_04175 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 N4T40_04180 PF00238 Ribosomal protein L14p/L23e N4T40_04185 PF00366 Ribosomal protein S17 N4T40_04190 PF00831 Ribosomal L29 protein N4T40_04195 PF00252 Ribosomal protein L16p/L10e N4T40_04205 PF00237 Ribosomal protein L22p/L17e N4T40_04210 PF00203 Ribosomal protein S19 N4T40_04215 PF03947 Ribosomal Proteins L2, C-terminal domain N4T40_04215 PF00181 Ribosomal Proteins L2, RNA binding domain N4T40_04220 PF00276 Ribosomal protein L23 N4T40_04225 PF00573 Ribosomal protein L4/L1 family N4T40_04230 PF00297 Ribosomal protein L3 N4T40_04235 PF00338 Ribosomal protein S10p/S20e N4T40_04245 PF01053 Cys/Met metabolism PLP-dependent enzyme N4T40_04250 PF05872 Bacterial protein of unknown function (DUF853) N4T40_04260 PF00970 Oxidoreductase FAD-binding domain N4T40_04260 PF00042 Globin N4T40_04260 PF00175 Oxidoreductase NAD-binding domain N4T40_04265 PF02082 Transcriptional regulator N4T40_04270 PF01926 50S ribosome-binding GTPase N4T40_04280 PF00375 Sodium:dicarboxylate symporter family N4T40_04290 PF01553 Acyltransferase N4T40_04305 PF00270 DEAD/DEAH box helicase N4T40_04305 PF00271 Helicase conserved C-terminal domain N4T40_04305 PF17191 RecG wedge domain N4T40_04310 PF00156 Phosphoribosyl transferase domain N4T40_04315 PF00293 NUDIX domain N4T40_04320 PF03641 Possible lysine decarboxylase N4T40_04325 PF01544 CorA-like Mg2+ transporter protein N4T40_04335 PF05494 MlaC protein N4T40_04345 PF02405 Permease MlaE N4T40_04350 PF00005 ABC transporter N4T40_04360 PF00271 Helicase conserved C-terminal domain N4T40_04360 PF00270 DEAD/DEAH box helicase N4T40_04360 PF03880 DbpA RNA binding domain N4T40_04360 PF12343 Cold shock protein DEAD box A N4T40_04365 PF00459 Inositol monophosphatase family N4T40_04370 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N4T40_04370 PF02779 Transketolase, pyrimidine binding domain N4T40_04370 PF02780 Transketolase, C-terminal domain N4T40_04375 PF00925 GTP cyclohydrolase II N4T40_04380 PF01218 Coproporphyrinogen III oxidase N4T40_04385 PF01488 Shikimate / quinate 5-dehydrogenase N4T40_04385 PF08501 Shikimate dehydrogenase substrate binding domain N4T40_04385 PF18317 Shikimate 5'-dehydrogenase C-terminal domain N4T40_04395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_04395 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_04395 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T40_04395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_04405 PF04024 PspC domain N4T40_04410 PF00571 CBS domain N4T40_04440 PF05746 DALR anticodon binding domain N4T40_04440 PF02092 Glycyl-tRNA synthetase beta subunit N4T40_04445 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system N4T40_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_04465 PF03466 LysR substrate binding domain N4T40_04480 PF05922 Peptidase inhibitor I9 N4T40_04480 PF00082 Subtilase family N4T40_04495 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family N4T40_04500 PF04996 Succinylarginine dihydrolase N4T40_04505 PF00171 Aldehyde dehydrogenase family N4T40_04510 PF04958 Arginine N-succinyltransferase beta subunit N4T40_04515 PF00202 Aminotransferase class-III N4T40_04520 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain N4T40_04520 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase N4T40_04525 PF00324 Amino acid permease N4T40_04535 PF08241 Methyltransferase domain N4T40_04555 PF13614 AAA domain N4T40_04560 PF01594 AI-2E family transporter N4T40_04565 PF00080 Copper/zinc superoxide dismutase (SODC) N4T40_04570 PF12805 FUSC-like inner membrane protein yccS N4T40_04580 PF13005 zinc-finger binding domain of transposase IS66 N4T40_04580 PF13817 IS66 C-terminal element N4T40_04580 PF03050 Transposase IS66 family N4T40_04580 PF13007 Transposase C of IS166 homeodomain N4T40_04605 PF02525 Flavodoxin-like fold N4T40_04610 PF03992 Antibiotic biosynthesis monooxygenase N4T40_04625 PF01565 FAD binding domain N4T40_04625 PF02913 FAD linked oxidases, C-terminal domain N4T40_04630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4T40_04630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4T40_04635 PF00892 EamA-like transporter family N4T40_04640 PF00892 EamA-like transporter family N4T40_04650 PF01925 Sulfite exporter TauE/SafE N4T40_04655 PF09157 Pseudouridine synthase II TruB, C-terminal N4T40_04655 PF16198 tRNA pseudouridylate synthase B C-terminal domain N4T40_04655 PF01509 TruB family pseudouridylate synthase (N terminal domain) N4T40_04660 PF03280 Proteobacterial lipase chaperone protein N4T40_04665 PF00561 alpha/beta hydrolase fold N4T40_04670 PF01245 Ribosomal protein L19 N4T40_04675 PF01746 tRNA (Guanine-1)-methyltransferase N4T40_04680 PF05239 PRC-barrel domain N4T40_04680 PF01782 RimM N-terminal domain N4T40_04685 PF00886 Ribosomal protein S16 N4T40_04725 PF02401 LytB protein N4T40_04730 PF00625 Guanylate kinase N4T40_04735 PF01192 RNA polymerase Rpb6 N4T40_04745 PF13291 ACT domain N4T40_04745 PF04607 Region found in RelA / SpoT proteins N4T40_04745 PF02824 TGS domain N4T40_04750 PF01042 Endoribonuclease L-PSP N4T40_04755 PF04324 BFD-like [2Fe-2S] binding domain N4T40_04760 PF00210 Ferritin-like domain N4T40_04765 PF04932 O-Antigen ligase N4T40_04765 PF11846 Virulence factor membrane-bound polymerase, C-terminal N4T40_04765 PF15864 Protein glycosylation ligase N4T40_04775 PF00114 Pilin (bacterial filament) N4T40_04775 PF07963 Prokaryotic N-terminal methylation motif N4T40_04785 PF04536 TPM domain N4T40_04790 PF04011 LemA family N4T40_04800 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_04800 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N4T40_04805 PF01645 Conserved region in glutamate synthase N4T40_04805 PF04898 Glutamate synthase central domain N4T40_04805 PF00310 Glutamine amidotransferases class-II N4T40_04805 PF01493 GXGXG motif N4T40_04815 PF01761 3-dehydroquinate synthase N4T40_04820 PF01202 Shikimate kinase N4T40_04825 PF03958 Bacterial type II/III secretion system short domain N4T40_04825 PF07660 Secretin and TonB N terminus short domain N4T40_04825 PF11741 AMIN domain N4T40_04825 PF00263 Bacterial type II and III secretion system protein N4T40_04835 PF04350 Pilus assembly protein, PilO N4T40_04840 PF05137 Fimbrial assembly protein (PilN) N4T40_04845 PF11104 Type IV pilus assembly protein PilM; N4T40_04850 PF17092 Penicillin-binding protein OB-like domain N4T40_04850 PF00912 Transglycosylase N4T40_04850 PF00905 Penicillin binding protein transpeptidase domain N4T40_04855 PF13847 Methyltransferase domain N4T40_04865 PF00953 Glycosyl transferase family 4 N4T40_04870 PF02875 Mur ligase family, glutamate ligase domain N4T40_04870 PF08245 Mur ligase middle domain N4T40_04870 PF01225 Mur ligase family, catalytic domain N4T40_04875 PF01225 Mur ligase family, catalytic domain N4T40_04875 PF02875 Mur ligase family, glutamate ligase domain N4T40_04875 PF08245 Mur ligase middle domain N4T40_04880 PF00905 Penicillin binding protein transpeptidase domain N4T40_04880 PF03717 Penicillin-binding Protein dimerisation domain N4T40_04890 PF01795 MraW methylase family N4T40_04905 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4T40_04920 PF00324 Amino acid permease N4T40_04950 PF01545 Cation efflux family N4T40_04955 PF00873 AcrB/AcrD/AcrF family N4T40_04960 PF00529 HlyD membrane-fusion protein of T1SS N4T40_04960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T40_04985 PF00005 ABC transporter N4T40_04985 PF12848 ABC transporter N4T40_04990 PF01053 Cys/Met metabolism PLP-dependent enzyme N4T40_04995 PF00106 short chain dehydrogenase N4T40_05000 PF01740 STAS domain N4T40_05000 PF00916 Sulfate permease family N4T40_05005 PF16921 Tex protein YqgF-like domain N4T40_05005 PF17674 HHH domain N4T40_05005 PF00575 S1 RNA binding domain N4T40_05005 PF09371 Tex-like protein N-terminal domain N4T40_05010 PF00072 Response regulator receiver domain N4T40_05010 PF00486 Transcriptional regulatory protein, C terminal N4T40_05015 PF00512 His Kinase A (phospho-acceptor) domain N4T40_05015 PF00672 HAMP domain N4T40_05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_05025 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain N4T40_05025 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain N4T40_05030 PF00583 Acetyltransferase (GNAT) family N4T40_05050 PF00475 Imidazoleglycerol-phosphate dehydratase N4T40_05055 PF00117 Glutamine amidotransferase class-I N4T40_05070 PF00977 Histidine biosynthesis protein N4T40_05085 PF03992 Antibiotic biosynthesis monooxygenase N4T40_05100 PF01636 Phosphotransferase enzyme family N4T40_05105 PF00977 Histidine biosynthesis protein N4T40_05120 PF00230 Major intrinsic protein N4T40_05145 PF02705 K+ potassium transporter N4T40_05165 PF02525 Flavodoxin-like fold N4T40_05170 PF01638 HxlR-like helix-turn-helix N4T40_05200 PF02311 AraC-like ligand binding domain N4T40_05200 PF12833 Helix-turn-helix domain N4T40_05205 PF00248 Aldo/keto reductase family N4T40_05225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_05225 PF03466 LysR substrate binding domain N4T40_05230 PF07690 Major Facilitator Superfamily N4T40_05240 PF00324 Amino acid permease N4T40_05245 PF13817 IS66 C-terminal element N4T40_05245 PF03050 Transposase IS66 family N4T40_05245 PF13007 Transposase C of IS166 homeodomain N4T40_05245 PF13005 zinc-finger binding domain of transposase IS66 N4T40_05260 PF00171 Aldehyde dehydrogenase family N4T40_05275 PF13556 PucR C-terminal helix-turn-helix domain N4T40_05275 PF06018 CodY GAF-like domain N4T40_05275 PF17853 GGDEF-like domain N4T40_05280 PF13737 Transposase DDE domain N4T40_05285 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term N4T40_05285 PF12833 Helix-turn-helix domain N4T40_05300 PF01593 Flavin containing amine oxidoreductase N4T40_05305 PF05726 Pirin C-terminal cupin domain N4T40_05305 PF02678 Pirin N4T40_05310 PF00857 Isochorismatase family N4T40_05315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_05320 PF00171 Aldehyde dehydrogenase family N4T40_05325 PF00202 Aminotransferase class-III N4T40_05330 PF00392 Bacterial regulatory proteins, gntR family N4T40_05330 PF00155 Aminotransferase class I and II N4T40_05335 PF00324 Amino acid permease N4T40_05345 PF03591 AzlC protein N4T40_05355 PF00436 Single-strand binding protein family N4T40_05360 PF07690 Major Facilitator Superfamily N4T40_05370 PF02581 Thiamine monophosphate synthase N4T40_05370 PF03070 TENA/THI-4/PQQC family N4T40_05370 PF08543 Phosphomethylpyrimidine kinase N4T40_05375 PF06942 GlpM protein N4T40_05385 PF08240 Alcohol dehydrogenase GroES-like domain N4T40_05385 PF00107 Zinc-binding dehydrogenase N4T40_05390 PF00440 Bacterial regulatory proteins, tetR family N4T40_05390 PF16925 Tetracyclin repressor-like, C-terminal domain N4T40_05395 PF17760 UvrA interaction domain N4T40_05395 PF00005 ABC transporter N4T40_05395 PF17755 UvrA DNA-binding domain N4T40_05400 PF00990 Diguanylate cyclase, GGDEF domain N4T40_05420 PF00474 Sodium:solute symporter family N4T40_05425 PF04341 Protein of unknown function, DUF485 N4T40_05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_05430 PF01627 Hpt domain N4T40_05430 PF00672 HAMP domain N4T40_05430 PF00072 Response regulator receiver domain N4T40_05430 PF00512 His Kinase A (phospho-acceptor) domain N4T40_05440 PF00196 Bacterial regulatory proteins, luxR family N4T40_05440 PF00072 Response regulator receiver domain N4T40_05445 PF03358 NADPH-dependent FMN reductase N4T40_05450 PF00296 Luciferase-like monooxygenase N4T40_05455 PF01037 Lrp/AsnC ligand binding domain N4T40_05460 PF00857 Isochorismatase family N4T40_05465 PF16177 Acetyl-coenzyme A synthetase N-terminus N4T40_05465 PF13193 AMP-binding enzyme C-terminal domain N4T40_05465 PF00501 AMP-binding enzyme N4T40_05475 PF00924 Mechanosensitive ion channel N4T40_05480 PF04452 RNA methyltransferase N4T40_05485 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) N4T40_05490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T40_05510 PF01368 DHH family N4T40_05510 PF02272 DHHA1 domain N4T40_05510 PF17768 RecJ OB domain N4T40_05515 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region N4T40_05515 PF01243 Pyridoxamine 5'-phosphate oxidase N4T40_05520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T40_05520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T40_05520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T40_05520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T40_05525 PF00571 CBS domain N4T40_05525 PF00478 IMP dehydrogenase / GMP reductase domain N4T40_05530 PF03692 Putative zinc- or iron-chelating domain N4T40_05535 PF01613 Flavin reductase like domain N4T40_05535 PF00258 Flavodoxin N4T40_05540 PF07715 TonB-dependent Receptor Plug Domain N4T40_05540 PF00593 TonB dependent receptor N4T40_05545 PF01169 Uncharacterized protein family UPF0016 N4T40_05555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N4T40_05555 PF00364 Biotin-requiring enzyme N4T40_05555 PF02817 e3 binding domain N4T40_05560 PF17831 Pyruvate dehydrogenase E1 component middle domain N4T40_05560 PF00456 Transketolase, thiamine diphosphate binding domain N4T40_05565 PF01551 Peptidase family M23 N4T40_05575 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase N4T40_05580 PF12327 FtsZ family, C-terminal domain N4T40_05580 PF00091 Tubulin/FtsZ family, GTPase domain N4T40_05585 PF02491 SHS2 domain inserted in FTSA N4T40_05590 PF08478 POTRA domain, FtsQ-type N4T40_05590 PF03799 Cell division protein FtsQ N4T40_05595 PF07478 D-ala D-ala ligase C-terminus N4T40_05595 PF01820 D-ala D-ala ligase N-terminus N4T40_05600 PF01225 Mur ligase family, catalytic domain N4T40_05600 PF02875 Mur ligase family, glutamate ligase domain N4T40_05600 PF08245 Mur ligase middle domain N4T40_05610 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain N4T40_05610 PF02951 Prokaryotic glutathione synthetase, N-terminal domain N4T40_05620 PF07715 TonB-dependent Receptor Plug Domain N4T40_05620 PF00593 TonB dependent receptor N4T40_05625 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) N4T40_05630 PF02463 RecF/RecN/SMC N terminal domain N4T40_05640 PF00156 Phosphoribosyl transferase domain N4T40_05645 PF03372 Endonuclease/Exonuclease/phosphatase family N4T40_05650 PF03960 ArsC family N4T40_05660 PF07859 alpha/beta hydrolase fold N4T40_05665 PF07694 5TMR of 5TMR-LYT N4T40_05665 PF00990 Diguanylate cyclase, GGDEF domain N4T40_05670 PF11412 Disulphide bond corrector protein DsbC N4T40_05670 PF02683 Cytochrome C biogenesis protein transmembrane region N4T40_05700 PF00576 HIUase/Transthyretin family N4T40_05705 PF00860 Permease family N4T40_05715 PF01494 FAD binding domain N4T40_05720 PF03561 Allantoicase repeat N4T40_05725 PF04115 Ureidoglycolate lyase N4T40_05730 PF00204 DNA gyrase B N4T40_05730 PF00986 DNA gyrase B subunit, carboxyl terminus N4T40_05730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_05730 PF01751 Toprim domain N4T40_05735 PF05728 Uncharacterised protein family (UPF0227) N4T40_05770 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) N4T40_05770 PF04717 Type VI secretion system, phage-baseplate injector N4T40_05770 PF13296 Putative type VI secretion system Rhs element Vgr N4T40_05775 PF02600 Disulfide bond formation protein DsbB N4T40_05780 PF04262 Glutamate-cysteine ligase N4T40_05795 PF04286 Protein of unknown function (DUF445) N4T40_05800 PF00155 Aminotransferase class I and II N4T40_05805 PF01554 MatE N4T40_05810 PF00106 short chain dehydrogenase N4T40_05820 PF00486 Transcriptional regulatory protein, C terminal N4T40_05820 PF00072 Response regulator receiver domain N4T40_05825 PF00989 PAS fold N4T40_05825 PF11808 Phosphate regulon sensor protein PhoR N4T40_05825 PF00512 His Kinase A (phospho-acceptor) domain N4T40_05825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_05835 PF02666 Phosphatidylserine decarboxylase N4T40_05840 PF00581 Rhodanese-like domain N4T40_05845 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family N4T40_05845 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain N4T40_05850 PF02580 D-Tyr-tRNA(Tyr) deacylase N4T40_05875 PF00925 GTP cyclohydrolase II N4T40_05875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N4T40_05880 PF00885 6,7-dimethyl-8-ribityllumazine synthase N4T40_05885 PF01029 NusB family N4T40_05890 PF00586 AIR synthase related protein, N-terminal domain N4T40_05890 PF02769 AIR synthase related protein, C-terminal domain N4T40_05895 PF04608 Phosphatidylglycerophosphatase A N4T40_05900 PF00132 Bacterial transferase hexapeptide (six repeats) N4T40_05900 PF14602 Hexapeptide repeat of succinyl-transferase N4T40_05900 PF12804 MobA-like NTP transferase domain N4T40_05905 PF01380 SIS domain N4T40_05910 PF01177 Asp/Glu/Hydantoin racemase N4T40_05925 PF00491 Arginase family N4T40_05930 PF01979 Amidohydrolase family N4T40_05940 PF00221 Aromatic amino acid lyase N4T40_05945 PF01175 Urocanase Rossmann-like domain N4T40_05945 PF17392 Urocanase C-terminal domain N4T40_05945 PF17391 Urocanase N-terminal domain N4T40_05950 PF05962 HutD N4T40_05955 PF00392 Bacterial regulatory proteins, gntR family N4T40_05955 PF07702 UTRA domain N4T40_05965 PF02492 CobW/HypB/UreG, nucleotide-binding domain N4T40_05965 PF07683 Cobalamin synthesis protein cobW C-terminal domain N4T40_05975 PF00324 Amino acid permease N4T40_05985 PF14497 Glutathione S-transferase, C-terminal domain N4T40_05985 PF02798 Glutathione S-transferase, N-terminal domain N4T40_05990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T40_06000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T40_06005 PF04463 Protein of unknown function (DUF523) N4T40_06010 PF01554 MatE N4T40_06015 PF13610 DDE domain N4T40_06030 PF01527 Transposase N4T40_06030 PF13333 Integrase core domain N4T40_06030 PF13276 HTH-like domain N4T40_06030 PF00665 Integrase core domain N4T40_06035 PF00665 Integrase core domain N4T40_06040 PF01695 IstB-like ATP binding protein N4T40_06050 PF00809 Pterin binding enzyme N4T40_06055 PF00893 Small Multidrug Resistance protein N4T40_06065 PF00905 Penicillin binding protein transpeptidase domain N4T40_06075 PF13427 Domain of unknown function (DUF4111) N4T40_06075 PF01909 Nucleotidyltransferase domain N4T40_06080 PF10706 Aminoglycoside-2''-adenylyltransferase N4T40_06090 PF13610 DDE domain N4T40_06100 PF00004 ATPase family associated with various cellular activities (AAA) N4T40_06100 PF12002 MgsA AAA+ ATPase C terminal N4T40_06100 PF16193 AAA C-terminal domain N4T40_06105 PF01226 Formate/nitrite transporter N4T40_06115 PF01259 SAICAR synthetase N4T40_06125 PF00701 Dihydrodipicolinate synthetase family N4T40_06130 PF00857 Isochorismatase family N4T40_06140 PF13610 DDE domain N4T40_06150 PF03692 Putative zinc- or iron-chelating domain N4T40_06155 PF07043 Protein of unknown function (DUF1328) N4T40_06170 PF10576 Iron-sulfur binding domain of endonuclease III N4T40_06170 PF00633 Helix-hairpin-helix motif N4T40_06170 PF00730 HhH-GPD superfamily base excision DNA repair protein N4T40_06170 PF14815 NUDIX domain N4T40_06190 PF08240 Alcohol dehydrogenase GroES-like domain N4T40_06190 PF00107 Zinc-binding dehydrogenase N4T40_06195 PF00155 Aminotransferase class I and II N4T40_06195 PF00392 Bacterial regulatory proteins, gntR family N4T40_06210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_06210 PF03466 LysR substrate binding domain N4T40_06215 PF00248 Aldo/keto reductase family N4T40_06220 PF07690 Major Facilitator Superfamily N4T40_06230 PF05173 Dihydrodipicolinate reductase, C-terminus N4T40_06230 PF01113 Dihydrodipicolinate reductase, N-terminus N4T40_06240 PF00684 DnaJ central domain N4T40_06240 PF00226 DnaJ domain N4T40_06240 PF01556 DnaJ C terminal domain N4T40_06250 PF00873 AcrB/AcrD/AcrF family N4T40_06255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T40_06260 PF08361 MAATS-type transcriptional repressor, C-terminal region N4T40_06260 PF00440 Bacterial regulatory proteins, tetR family N4T40_06265 PF00311 Phosphoenolpyruvate carboxylase N4T40_06270 PF00860 Permease family N4T40_06275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_06275 PF03466 LysR substrate binding domain N4T40_06290 PF00920 Dehydratase family N4T40_06295 PF00551 Formyl transferase N4T40_06295 PF02911 Formyl transferase, C-terminal domain N4T40_06300 PF01189 16S rRNA methyltransferase RsmB/F N4T40_06300 PF01029 NusB family N4T40_06310 PF00209 Sodium:neurotransmitter symporter family N4T40_06350 PF00579 tRNA synthetases class I (W and Y) N4T40_06355 PF03702 Anhydro-N-acetylmuramic acid kinase N4T40_06360 PF00561 alpha/beta hydrolase fold N4T40_06365 PF01521 Iron-sulphur cluster biosynthesis N4T40_06385 PF00005 ABC transporter N4T40_06385 PF12848 ABC transporter N4T40_06390 PF09335 SNARE associated Golgi protein N4T40_06400 PF00204 DNA gyrase B N4T40_06400 PF00986 DNA gyrase B subunit, carboxyl terminus N4T40_06400 PF18053 DNA gyrase B subunit insert domain N4T40_06400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_06400 PF01751 Toprim domain N4T40_06405 PF02463 RecF/RecN/SMC N terminal domain N4T40_06410 PF02767 DNA polymerase III beta subunit, central domain N4T40_06410 PF02768 DNA polymerase III beta subunit, C-terminal domain N4T40_06410 PF00712 DNA polymerase III beta subunit, N-terminal domain N4T40_06415 PF00308 Bacterial dnaA protein N4T40_06415 PF08299 Bacterial dnaA protein helix-turn-helix N4T40_06415 PF11638 DnaA N-terminal domain N4T40_06420 PF00468 Ribosomal protein L34 N4T40_06425 PF00825 Ribonuclease P N4T40_06430 PF01809 Putative membrane protein insertion efficiency factor N4T40_06435 PF14849 YidC periplasmic domain N4T40_06435 PF02096 60Kd inner membrane protein N4T40_06440 PF10396 GTP-binding protein TrmE N-terminus N4T40_06440 PF01926 50S ribosome-binding GTPase N4T40_06440 PF12631 MnmE helical domain N4T40_06445 PF02583 Metal-sensitive transcriptional repressor N4T40_06450 PF16916 Dimerisation domain of Zinc Transporter N4T40_06450 PF01545 Cation efflux family N4T40_06455 PF13098 Thioredoxin-like domain N4T40_06455 PF10411 Disulfide bond isomerase protein N-terminus N4T40_06465 PF00156 Phosphoribosyl transferase domain N4T40_06470 PF01979 Amidohydrolase family N4T40_06475 PF00355 Rieske [2Fe-2S] domain N4T40_06480 PF03738 Glutathionylspermidine synthase preATP-grasp N4T40_06490 PF03741 Integral membrane protein TerC family N4T40_06495 PF01569 PAP2 superfamily N4T40_06505 PF01225 Mur ligase family, catalytic domain N4T40_06505 PF02875 Mur ligase family, glutamate ligase domain N4T40_06505 PF08245 Mur ligase middle domain N4T40_06515 PF00731 AIR carboxylase N4T40_06520 PF02222 ATP-grasp domain N4T40_06520 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain N4T40_06525 PF13406 Transglycosylase SLT domain N4T40_06545 PF00012 Hsp70 protein N4T40_06550 PF01025 GrpE N4T40_06555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_06555 PF03466 LysR substrate binding domain N4T40_06575 PF07859 alpha/beta hydrolase fold N4T40_06580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N4T40_06620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T40_06625 PF01252 Signal peptidase (SPase) II N4T40_06630 PF00133 tRNA synthetases class I (I, L, M and V) N4T40_06630 PF06827 Zinc finger found in FPG and IleRS N4T40_06630 PF08264 Anticodon-binding domain of tRNA N4T40_06635 PF01687 Riboflavin kinase N4T40_06635 PF06574 FAD synthetase N4T40_06645 PF01048 Phosphorylase superfamily N4T40_06650 PF08362 YcdC-like protein, C-terminal region N4T40_06650 PF00440 Bacterial regulatory proteins, tetR family N4T40_06655 PF00005 ABC transporter N4T40_06660 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_06665 PF00296 Luciferase-like monooxygenase N4T40_06670 PF09084 NMT1/THI5 like N4T40_06675 PF09084 NMT1/THI5 like N4T40_06680 PF00696 Amino acid kinase family N4T40_06680 PF00583 Acetyltransferase (GNAT) family N4T40_06695 PF00106 short chain dehydrogenase N4T40_06700 PF13419 Haloacid dehalogenase-like hydrolase N4T40_06710 PF01323 DSBA-like thioredoxin domain N4T40_06715 PF00440 Bacterial regulatory proteins, tetR family N4T40_06715 PF08360 QacR-like protein, C-terminal region N4T40_06720 PF00440 Bacterial regulatory proteins, tetR family N4T40_06725 PF00175 Oxidoreductase NAD-binding domain N4T40_06730 PF00487 Fatty acid desaturase N4T40_06735 PF01138 3' exoribonuclease family, domain 1 N4T40_06735 PF03725 3' exoribonuclease family, domain 2 N4T40_06755 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain N4T40_06755 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain N4T40_06760 PF01510 N-acetylmuramoyl-L-alanine amidase N4T40_06765 PF03023 Lipid II flippase MurJ N4T40_06770 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N4T40_06770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T40_06775 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N4T40_06775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T40_06780 PF13807 G-rich domain on putative tyrosine kinase N4T40_06780 PF02706 Chain length determinant protein N4T40_06780 PF13614 AAA domain N4T40_06785 PF01451 Low molecular weight phosphotyrosine protein phosphatase N4T40_06790 PF10531 SLBB domain N4T40_06790 PF18412 Outer-membrane lipoprotein Wza C-terminal domain N4T40_06790 PF02563 Polysaccharide biosynthesis/export protein N4T40_06795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N4T40_06795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N4T40_06795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N4T40_06800 PF02719 Polysaccharide biosynthesis protein N4T40_06805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N4T40_06810 PF02348 Cytidylyltransferase N4T40_06825 PF03102 NeuB family N4T40_06825 PF08666 SAF domain N4T40_06855 PF00535 Glycosyl transferase family 2 N4T40_06860 PF02397 Bacterial sugar transferase N4T40_06865 PF00483 Nucleotidyl transferase N4T40_06870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N4T40_06870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N4T40_06870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N4T40_06875 PF00342 Phosphoglucose isomerase N4T40_06880 PF16363 GDP-mannose 4,6 dehydratase N4T40_06885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T40_06885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T40_06885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T40_06885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T40_06890 PF02652 L-lactate permease N4T40_06895 PF07729 FCD domain N4T40_06895 PF00392 Bacterial regulatory proteins, gntR family N4T40_06900 PF01070 FMN-dependent dehydrogenase N4T40_06905 PF01565 FAD binding domain N4T40_06905 PF09330 D-lactate dehydrogenase, membrane binding N4T40_06910 PF00155 Aminotransferase class I and II N4T40_06920 PF07729 FCD domain N4T40_06920 PF00392 Bacterial regulatory proteins, gntR family N4T40_06930 PF00285 Citrate synthase, C-terminal domain N4T40_06935 PF00330 Aconitase family (aconitate hydratase) N4T40_06935 PF00694 Aconitase C-terminal domain N4T40_06970 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T40_06970 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T40_06980 PF08361 MAATS-type transcriptional repressor, C-terminal region N4T40_06980 PF00440 Bacterial regulatory proteins, tetR family N4T40_06995 PF00849 RNA pseudouridylate synthase N4T40_07010 PF07715 TonB-dependent Receptor Plug Domain N4T40_07010 PF00593 TonB dependent receptor N4T40_07020 PF01037 Lrp/AsnC ligand binding domain N4T40_07025 PF01266 FAD dependent oxidoreductase N4T40_07030 PF01168 Alanine racemase, N-terminal domain N4T40_07030 PF00842 Alanine racemase, C-terminal domain N4T40_07035 PF01042 Endoribonuclease L-PSP N4T40_07040 PF00324 Amino acid permease N4T40_07045 PF00324 Amino acid permease N4T40_07055 PF00171 Aldehyde dehydrogenase family N4T40_07060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N4T40_07060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N4T40_07065 PF13193 AMP-binding enzyme C-terminal domain N4T40_07065 PF00501 AMP-binding enzyme N4T40_07070 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_07070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_07070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_07075 PF00378 Enoyl-CoA hydratase/isomerase N4T40_07080 PF00378 Enoyl-CoA hydratase/isomerase N4T40_07085 PF07690 Major Facilitator Superfamily N4T40_07085 PF00083 Sugar (and other) transporter N4T40_07090 PF00765 Autoinducer synthase N4T40_07100 PF03472 Autoinducer binding domain N4T40_07100 PF00196 Bacterial regulatory proteins, luxR family N4T40_07105 PF00665 Integrase core domain N4T40_07105 PF13936 Helix-turn-helix domain N4T40_07110 PF00501 AMP-binding enzyme N4T40_07115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_07115 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_07115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_07120 PF16197 Ketoacyl-synthetase C-terminal extension N4T40_07120 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T40_07120 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T40_07120 PF08242 Methyltransferase domain N4T40_07120 PF00550 Phosphopantetheine attachment site N4T40_07120 PF14765 Polyketide synthase dehydratase N4T40_07120 PF00975 Thioesterase domain N4T40_07140 PF12697 Alpha/beta hydrolase family N4T40_07145 PF01648 4'-phosphopantetheinyl transferase superfamily N4T40_07160 PF01722 BolA-like protein N4T40_07170 PF13614 AAA domain N4T40_07185 PF09335 SNARE associated Golgi protein N4T40_07190 PF07681 DoxX N4T40_07200 PF02540 NAD synthase N4T40_07200 PF00117 Glutamine amidotransferase class-I N4T40_07200 PF00958 GMP synthase C terminal domain N4T40_07205 PF13427 Domain of unknown function (DUF4111) N4T40_07205 PF01909 Nucleotidyltransferase domain N4T40_07210 PF03551 Transcriptional regulator PadR-like family N4T40_07220 PF02678 Pirin N4T40_07220 PF05726 Pirin C-terminal cupin domain N4T40_07240 PF03485 Arginyl tRNA synthetase N terminal domain N4T40_07240 PF05746 DALR anticodon binding domain N4T40_07240 PF00750 tRNA synthetases class I (R) N4T40_07245 PF00390 Malic enzyme, N-terminal domain N4T40_07245 PF03949 Malic enzyme, NAD binding domain N4T40_07255 PF04261 Dyp-type peroxidase family N4T40_07260 PF01810 LysE type translocator N4T40_07265 PF00950 ABC 3 transport family N4T40_07270 PF00005 ABC transporter N4T40_07290 PF00119 ATP synthase A chain N4T40_07295 PF00137 ATP synthase subunit C N4T40_07300 PF00430 ATP synthase B/B' CF(0) N4T40_07305 PF00213 ATP synthase delta (OSCP) subunit N4T40_07310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4T40_07310 PF00306 ATP synthase alpha/beta chain, C terminal domain N4T40_07310 PF02874 ATP synthase alpha/beta family, beta-barrel domain N4T40_07315 PF00231 ATP synthase N4T40_07320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4T40_07320 PF02874 ATP synthase alpha/beta family, beta-barrel domain N4T40_07325 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N4T40_07335 PF00255 Glutathione peroxidase N4T40_07345 PF07690 Major Facilitator Superfamily N4T40_07350 PF00440 Bacterial regulatory proteins, tetR family N4T40_07355 PF00892 EamA-like transporter family N4T40_07360 PF01300 Telomere recombination N4T40_07365 PF17782 DprA winged helix domain N4T40_07365 PF02481 DNA recombination-mediator protein A N4T40_07375 PF01327 Polypeptide deformylase N4T40_07435 PF00291 Pyridoxal-phosphate dependent enzyme N4T40_07445 PF03358 NADPH-dependent FMN reductase N4T40_07465 PF04055 Radical SAM superfamily N4T40_07465 PF11842 Domain of unknown function (DUF3362) N4T40_07465 PF08497 Radical SAM N-terminal N4T40_07495 PF07690 Major Facilitator Superfamily N4T40_07500 PF03641 Possible lysine decarboxylase N4T40_07505 PF03741 Integral membrane protein TerC family N4T40_07505 PF03471 Transporter associated domain N4T40_07510 PF02810 SEC-C motif N4T40_07515 PF03458 UPF0126 domain N4T40_07520 PF07690 Major Facilitator Superfamily N4T40_07525 PF00521 DNA gyrase/topoisomerase IV, subunit A N4T40_07525 PF03989 DNA gyrase C-terminal domain, beta-propeller N4T40_07530 PF13193 AMP-binding enzyme C-terminal domain N4T40_07530 PF00501 AMP-binding enzyme N4T40_07545 PF00719 Inorganic pyrophosphatase N4T40_07550 PF03573 outer membrane porin, OprD family N4T40_07570 PF00701 Dihydrodipicolinate synthetase family N4T40_07595 PF00665 Integrase core domain N4T40_07625 PF00582 Universal stress protein family N4T40_07630 PF00916 Sulfate permease family N4T40_07630 PF01740 STAS domain N4T40_07650 PF00543 Nitrogen regulatory protein P-II N4T40_07655 PF00909 Ammonium Transporter Family N4T40_07660 PF03477 ATP cone domain N4T40_07665 PF01872 RibD C-terminal domain N4T40_07665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N4T40_07675 PF00677 Lumazine binding domain N4T40_07695 PF00883 Cytosol aminopeptidase family, catalytic domain N4T40_07695 PF02789 Cytosol aminopeptidase family, N-terminal domain N4T40_07705 PF03739 Lipopolysaccharide export system permease LptF/LptG N4T40_07710 PF06415 BPG-independent PGAM N-terminus (iPGM_N) N4T40_07710 PF01676 Metalloenzyme superfamily N4T40_07715 PF00595 PDZ domain N4T40_07715 PF03572 Peptidase family S41 N4T40_07720 PF02954 Bacterial regulatory protein, Fis family N4T40_07720 PF00072 Response regulator receiver domain N4T40_07720 PF00158 Sigma-54 interaction domain N4T40_07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_07725 PF00512 His Kinase A (phospho-acceptor) domain N4T40_07730 PF00072 Response regulator receiver domain N4T40_07730 PF00196 Bacterial regulatory proteins, luxR family N4T40_07735 PF00768 D-alanyl-D-alanine carboxypeptidase N4T40_07740 PF00291 Pyridoxal-phosphate dependent enzyme N4T40_07745 PF00742 Homoserine dehydrogenase N4T40_07745 PF03447 Homoserine dehydrogenase, NAD binding domain N4T40_07745 PF01842 ACT domain N4T40_07750 PF13098 Thioredoxin-like domain N4T40_07750 PF10411 Disulfide bond isomerase protein N-terminus N4T40_07755 PF00589 Phage integrase family N4T40_07755 PF02899 Phage integrase, N-terminal SAM-like domain N4T40_07765 PF07670 Nucleoside recognition N4T40_07765 PF02421 Ferrous iron transport protein B N4T40_07765 PF07664 Ferrous iron transport protein B C terminus N4T40_07775 PF08245 Mur ligase middle domain N4T40_07775 PF02875 Mur ligase family, glutamate ligase domain N4T40_07780 PF01098 Cell cycle protein N4T40_07785 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4T40_07790 PF01258 Prokaryotic dksA/traR C4-type zinc finger N4T40_07795 PF00149 Calcineurin-like phosphoesterase N4T40_07800 PF00293 NUDIX domain N4T40_07805 PF13667 ThiC-associated domain N4T40_07805 PF01964 Radical SAM ThiC family N4T40_07820 PF00892 EamA-like transporter family N4T40_07825 PF02321 Outer membrane efflux protein N4T40_07830 PF01895 PhoU domain N4T40_07835 PF04362 Bacterial Fe(2+) trafficking N4T40_07840 PF00206 Lyase N4T40_07840 PF14698 Argininosuccinate lyase C-terminal N4T40_07845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_07845 PF06580 Histidine kinase N4T40_07845 PF07694 5TMR of 5TMR-LYT N4T40_07850 PF04397 LytTr DNA-binding domain N4T40_07850 PF00072 Response regulator receiver domain N4T40_07855 PF03900 Porphobilinogen deaminase, C-terminal domain N4T40_07855 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N4T40_07880 PF00816 H-NS histone family N4T40_07895 PF00263 Bacterial type II and III secretion system protein N4T40_07895 PF03958 Bacterial type II/III secretion system short domain N4T40_07900 PF12401 Protein of unknown function (DUF2662) N4T40_07900 PF00498 FHA domain N4T40_07905 PF13419 Haloacid dehalogenase-like hydrolase N4T40_07910 PF00425 chorismate binding enzyme N4T40_07910 PF04715 Anthranilate synthase component I, N terminal region N4T40_07935 PF03144 Elongation factor Tu domain 2 N4T40_07935 PF00009 Elongation factor Tu GTP binding domain N4T40_07935 PF03143 Elongation factor Tu C-terminal domain N4T40_07945 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N4T40_07950 PF00467 KOW motif N4T40_07950 PF02357 Transcription termination factor nusG N4T40_07955 PF00298 Ribosomal protein L11, RNA binding domain N4T40_07955 PF03946 Ribosomal protein L11, N-terminal domain N4T40_07960 PF00687 Ribosomal protein L1p/L10e family N4T40_07965 PF00466 Ribosomal protein L10 N4T40_07970 PF00542 Ribosomal protein L7/L12 C-terminal domain N4T40_07970 PF16320 Ribosomal protein L7/L12 dimerisation domain N4T40_07975 PF10385 RNA polymerase beta subunit external 1 domain N4T40_07975 PF04565 RNA polymerase Rpb2, domain 3 N4T40_07975 PF04561 RNA polymerase Rpb2, domain 2 N4T40_07975 PF00562 RNA polymerase Rpb2, domain 6 N4T40_07975 PF04563 RNA polymerase beta subunit N4T40_07975 PF04560 RNA polymerase Rpb2, domain 7 N4T40_07980 PF05000 RNA polymerase Rpb1, domain 4 N4T40_07980 PF04998 RNA polymerase Rpb1, domain 5 N4T40_07980 PF04983 RNA polymerase Rpb1, domain 3 N4T40_07980 PF04997 RNA polymerase Rpb1, domain 1 N4T40_07980 PF00623 RNA polymerase Rpb1, domain 2 N4T40_07995 PF13737 Transposase DDE domain N4T40_08005 PF00561 alpha/beta hydrolase fold N4T40_08010 PF13726 Na+-H+ antiporter family N4T40_08010 PF03553 Na+/H+ antiporter family N4T40_08025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_08025 PF00183 Hsp90 protein N4T40_08040 PF01323 DSBA-like thioredoxin domain N4T40_08050 PF00376 MerR family regulatory protein N4T40_08050 PF09278 MerR, DNA binding N4T40_08065 PF02803 Thiolase, C-terminal domain N4T40_08065 PF00108 Thiolase, N-terminal domain N4T40_08070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T40_08070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T40_08070 PF00378 Enoyl-CoA hydratase/isomerase N4T40_08100 PF08459 UvrC Helix-hairpin-helix N-terminal N4T40_08100 PF02151 UvrB/uvrC motif N4T40_08100 PF01541 GIY-YIG catalytic domain N4T40_08110 PF01066 CDP-alcohol phosphatidyltransferase N4T40_08115 PF02805 Metal binding domain of Ada N4T40_08115 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N4T40_08115 PF12833 Helix-turn-helix domain N4T40_08115 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N4T40_08140 PF13533 Biotin-lipoyl like N4T40_08145 PF03652 Holliday junction resolvase N4T40_08150 PF02622 Uncharacterized ACR, COG1678 N4T40_08155 PF02463 RecF/RecN/SMC N terminal domain N4T40_08165 PF06865 Pyrimidine/purine nucleoside phosphorylase N4T40_08170 PF00588 SpoU rRNA Methylase family N4T40_08170 PF08032 RNA 2'-O ribose methyltransferase substrate binding N4T40_08180 PF01121 Dephospho-CoA kinase N4T40_08185 PF01478 Type IV leader peptidase family N4T40_08185 PF06750 Bacterial Peptidase A24 N-terminal domain N4T40_08190 PF00482 Type II secretion system (T2SS), protein F N4T40_08195 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N4T40_08195 PF00437 Type II/IV secretion system protein N4T40_08200 PF00121 Triosephosphate isomerase N4T40_08205 PF03840 Preprotein translocase SecG subunit N4T40_08225 PF17384 RimP C-terminal SH3 domain N4T40_08225 PF02576 RimP N-terminal domain N4T40_08230 PF08529 NusA N-terminal domain N4T40_08230 PF00575 S1 RNA binding domain N4T40_08230 PF13184 NusA-like KH domain N4T40_08235 PF00009 Elongation factor Tu GTP binding domain N4T40_08235 PF11987 Translation-initiation factor 2 N4T40_08235 PF04760 Translation initiation factor IF-2, N-terminal region N4T40_08235 PF08364 Bacterial translation initiation factor IF-2 associated region N4T40_08240 PF02033 Ribosome-binding factor A N4T40_08245 PF03334 Na+/H+ antiporter subunit N4T40_08250 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) N4T40_08255 PF01899 Na+/H+ ion antiporter subunit N4T40_08260 PF00361 Proton-conducting membrane transporter N4T40_08265 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L N4T40_08270 PF00361 Proton-conducting membrane transporter N4T40_08270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N4T40_08270 PF13244 Domain of unknown function (DUF4040) N4T40_08270 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter N4T40_08285 PF01502 Phosphoribosyl-AMP cyclohydrolase N4T40_08290 PF01494 FAD binding domain N4T40_08295 PF03109 ABC1 family N4T40_08305 PF01209 ubiE/COQ5 methyltransferase family N4T40_08315 PF03976 Polyphosphate kinase 2 (PPK2) N4T40_08325 PF17946 RecC C-terminal domain N4T40_08330 PF12705 PD-(D/E)XK nuclease superfamily N4T40_08330 PF00580 UvrD/REP helicase N-terminal domain N4T40_08330 PF13361 UvrD-like helicase C-terminal domain N4T40_08335 PF13538 UvrD-like helicase C-terminal domain N4T40_08340 PF00144 Beta-lactamase N4T40_08345 PF00312 Ribosomal protein S15 N4T40_08350 PF03725 3' exoribonuclease family, domain 2 N4T40_08350 PF01138 3' exoribonuclease family, domain 1 N4T40_08350 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N4T40_08350 PF00013 KH domain N4T40_08350 PF00575 S1 RNA binding domain N4T40_08355 PF01544 CorA-like Mg2+ transporter protein N4T40_08365 PF00226 DnaJ domain N4T40_08365 PF01556 DnaJ C terminal domain N4T40_08375 PF01430 Hsp33 protein N4T40_08380 PF00999 Sodium/hydrogen exchanger family N4T40_08380 PF02254 TrkA-N domain N4T40_08385 PF00270 DEAD/DEAH box helicase N4T40_08385 PF00271 Helicase conserved C-terminal domain N4T40_08385 PF17764 3′ DNA-binding domain (3′BD) N4T40_08385 PF18074 Primosomal protein N C-terminal domain N4T40_08385 PF18319 PriA DNA helicase Cys-rich region (CRR) domain N4T40_08390 PF00482 Type II secretion system (T2SS), protein F N4T40_08395 PF08334 Type II secretion system (T2SS), protein G N4T40_08395 PF07963 Prokaryotic N-terminal methylation motif N4T40_08405 PF01588 Putative tRNA binding domain N4T40_08410 PF00795 Carbon-nitrogen hydrolase N4T40_08415 PF00571 CBS domain N4T40_08415 PF03471 Transporter associated domain N4T40_08420 PF01206 Sulfurtransferase TusA N4T40_08435 PF01177 Asp/Glu/Hydantoin racemase N4T40_08445 PF00762 Ferrochelatase N4T40_08450 PF00753 Metallo-beta-lactamase superfamily N4T40_08455 PF03884 DNA gyrase inhibitor YacG N4T40_08465 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_08465 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N4T40_08465 PF13247 4Fe-4S dicluster domain N4T40_08475 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N4T40_08490 PF01197 Ribosomal protein L31 N4T40_08495 PF03109 ABC1 family N4T40_08500 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T40_08500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_08505 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T40_08505 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_08505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_08510 PF01554 MatE N4T40_08520 PF06969 HemN C-terminal domain N4T40_08520 PF04055 Radical SAM superfamily N4T40_08530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_08530 PF03466 LysR substrate binding domain N4T40_08545 PF13193 AMP-binding enzyme C-terminal domain N4T40_08545 PF00501 AMP-binding enzyme N4T40_08550 PF12111 Polyribonucleotide phosphorylase C terminal N4T40_08550 PF10150 Ribonuclease E/G family N4T40_08550 PF00575 S1 RNA binding domain N4T40_08555 PF00849 RNA pseudouridylate synthase N4T40_08555 PF01479 S4 domain N4T40_08560 PF13419 Haloacid dehalogenase-like hydrolase N4T40_08565 PF08279 HTH domain N4T40_08565 PF13280 WYL domain N4T40_08570 PF02798 Glutathione S-transferase, N-terminal domain N4T40_08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_08580 PF03466 LysR substrate binding domain N4T40_08585 PF12706 Beta-lactamase superfamily domain N4T40_08590 PF00141 Peroxidase N4T40_08595 PF02896 PEP-utilising enzyme, TIM barrel domain N4T40_08595 PF00391 PEP-utilising enzyme, mobile domain N4T40_08595 PF05524 PEP-utilising enzyme, N-terminal N4T40_08595 PF01590 GAF domain N4T40_08600 PF00293 NUDIX domain N4T40_08620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_08620 PF03466 LysR substrate binding domain N4T40_08630 PF00330 Aconitase family (aconitate hydratase) N4T40_08635 PF00694 Aconitase C-terminal domain N4T40_08645 PF00180 Isocitrate/isopropylmalate dehydrogenase N4T40_08660 PF01176 Translation initiation factor 1A / IF-1 N4T40_08670 PF01416 tRNA pseudouridine synthase N4T40_08690 PF02774 Semialdehyde dehydrogenase, dimerisation domain N4T40_08690 PF01118 Semialdehyde dehydrogenase, NAD binding domain N4T40_08700 PF00375 Sodium:dicarboxylate symporter family N4T40_08710 PF03279 Bacterial lipid A biosynthesis acyltransferase N4T40_08715 PF01810 LysE type translocator N4T40_08720 PF00005 ABC transporter N4T40_08720 PF16326 ABC transporter C-terminal domain N4T40_08720 PF12848 ABC transporter N4T40_08725 PF04102 SlyX N4T40_08730 PF08240 Alcohol dehydrogenase GroES-like domain N4T40_08730 PF00107 Zinc-binding dehydrogenase N4T40_08735 PF01638 HxlR-like helix-turn-helix N4T40_08745 PF01396 Topoisomerase DNA binding C4 zinc finger N4T40_08745 PF01131 DNA topoisomerase N4T40_08745 PF08272 Topoisomerase I zinc-ribbon-like N4T40_08745 PF01751 Toprim domain N4T40_08760 PF00580 UvrD/REP helicase N-terminal domain N4T40_08760 PF13361 UvrD-like helicase C-terminal domain N4T40_08765 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) N4T40_08785 PF00999 Sodium/hydrogen exchanger family N4T40_08785 PF02254 TrkA-N domain N4T40_08790 PF00471 Ribosomal protein L33 N4T40_08795 PF00830 Ribosomal L28 family N4T40_08800 PF00171 Aldehyde dehydrogenase family N4T40_08810 PF00551 Formyl transferase N4T40_08810 PF01842 ACT domain N4T40_08820 PF01618 MotA/TolQ/ExbB proton channel family N4T40_08830 PF01625 Peptide methionine sulfoxide reductase N4T40_08840 PF00186 Dihydrofolate reductase N4T40_08845 PF00303 Thymidylate synthase N4T40_08860 PF01790 Prolipoprotein diacylglyceryl transferase N4T40_08880 PF00902 Sec-independent protein translocase protein (TatC) N4T40_08885 PF02416 mttA/Hcf106 family N4T40_08890 PF02416 mttA/Hcf106 family N4T40_08900 PF01725 Ham1 family N4T40_08910 PF07021 Methionine biosynthesis protein MetW N4T40_08910 PF00561 alpha/beta hydrolase fold N4T40_08915 PF00561 alpha/beta hydrolase fold N4T40_08920 PF00682 HMGL-like N4T40_08920 PF08502 LeuA allosteric (dimerisation) domain N4T40_08925 PF13640 2OG-Fe(II) oxygenase superfamily N4T40_08925 PF18331 PKHD-type hydroxylase C-terminal domain N4T40_08930 PF07715 TonB-dependent Receptor Plug Domain N4T40_08930 PF00593 TonB dependent receptor N4T40_08935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T40_08935 PF05698 Bacterial trigger factor protein (TF) C-terminus N4T40_08935 PF05697 Bacterial trigger factor protein (TF) N4T40_08940 PF00574 Clp protease N4T40_08945 PF07724 AAA domain (Cdc48 subfamily) N4T40_08945 PF10431 C-terminal, D2-small domain, of ClpB protein N4T40_08945 PF06689 ClpX C4-type zinc finger N4T40_08960 PF05681 Fumarate hydratase (Fumerase) N4T40_08960 PF05683 Fumarase C-terminus N4T40_08965 PF07085 DRTGG domain N4T40_08965 PF01515 Phosphate acetyl/butaryl transferase N4T40_08970 PF00871 Acetokinase family N4T40_08975 PF00920 Dehydratase family N4T40_08980 PF01081 KDPG and KHG aldolase N4T40_08985 PF02447 GntP family permease N4T40_08990 PF01202 Shikimate kinase N4T40_08995 PF00171 Aldehyde dehydrogenase family N4T40_09000 PF00171 Aldehyde dehydrogenase family N4T40_09005 PF00561 alpha/beta hydrolase fold N4T40_09015 PF00933 Glycosyl hydrolase family 3 N terminal domain N4T40_09020 PF11818 C-terminal domain of tail specific protease (DUF3340) N4T40_09020 PF00595 PDZ domain N4T40_09020 PF03572 Peptidase family S41 N4T40_09020 PF17804 Tail specific protease N-terminal domain N4T40_09025 PF00534 Glycosyl transferases group 1 N4T40_09025 PF13439 Glycosyltransferase Family 4 N4T40_09030 PF01569 PAP2 superfamily N4T40_09035 PF04384 Iron-sulphur cluster assembly N4T40_09040 PF00334 Nucleoside diphosphate kinase N4T40_09045 PF04055 Radical SAM superfamily N4T40_09055 PF13464 Domain of unknown function (DUF4115) N4T40_09060 PF04551 GcpE protein N4T40_09065 PF03129 Anticodon binding domain N4T40_09065 PF13393 Histidyl-tRNA synthetase N4T40_09075 PF13360 PQQ-like domain N4T40_09080 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N4T40_09080 PF01926 50S ribosome-binding GTPase N4T40_09090 PF02556 Preprotein translocase subunit SecB N4T40_09095 PF00462 Glutaredoxin N4T40_09105 PF03193 RsgA GTPase N4T40_09110 PF00929 Exonuclease N4T40_09125 PF02321 Outer membrane efflux protein N4T40_09130 PF00005 ABC transporter N4T40_09130 PF02687 FtsX-like permease family N4T40_09130 PF12704 MacB-like periplasmic core domain N4T40_09135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T40_09150 PF08264 Anticodon-binding domain of tRNA N4T40_09150 PF00133 tRNA synthetases class I (I, L, M and V) N4T40_09150 PF13603 Leucyl-tRNA synthetase, Domain 2 N4T40_09150 PF09334 tRNA synthetases class I (M) N4T40_09160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4T40_09160 PF00205 Thiamine pyrophosphate enzyme, central domain N4T40_09160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4T40_09165 PF10369 Small subunit of acetolactate synthase N4T40_09170 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N4T40_09170 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N4T40_09175 PF00990 Diguanylate cyclase, GGDEF domain N4T40_09175 PF03707 Bacterial signalling protein N terminal repeat N4T40_09175 PF00563 EAL domain N4T40_09190 PF00665 Integrase core domain N4T40_09190 PF13936 Helix-turn-helix domain N4T40_09195 PF01636 Phosphotransferase enzyme family N4T40_09200 PF00665 Integrase core domain N4T40_09200 PF13936 Helix-turn-helix domain N4T40_09210 PF00009 Elongation factor Tu GTP binding domain N4T40_09210 PF03144 Elongation factor Tu domain 2 N4T40_09210 PF16658 Class II release factor RF3, C-terminal domain N4T40_09225 PF01026 TatD related DNase N4T40_09230 PF00330 Aconitase family (aconitate hydratase) N4T40_09230 PF00694 Aconitase C-terminal domain N4T40_09240 PF00899 ThiF family N4T40_09250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_09250 PF03466 LysR substrate binding domain N4T40_09260 PF01207 Dihydrouridine synthase (Dus) N4T40_09265 PF07690 Major Facilitator Superfamily N4T40_09275 PF00892 EamA-like transporter family N4T40_09280 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N4T40_09280 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N4T40_09285 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch N4T40_09290 PF02233 NAD(P) transhydrogenase beta subunit N4T40_09295 PF00106 short chain dehydrogenase N4T40_09305 PF01261 Xylose isomerase-like TIM barrel N4T40_09310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N4T40_09310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N4T40_09315 PF00378 Enoyl-CoA hydratase/isomerase N4T40_09320 PF00672 HAMP domain N4T40_09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_09320 PF00512 His Kinase A (phospho-acceptor) domain N4T40_09320 PF01627 Hpt domain N4T40_09320 PF00072 Response regulator receiver domain N4T40_09320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N4T40_09325 PF00291 Pyridoxal-phosphate dependent enzyme N4T40_09335 PF05958 tRNA (Uracil-5-)-methyltransferase N4T40_09340 PF13291 ACT domain N4T40_09340 PF04607 Region found in RelA / SpoT proteins N4T40_09340 PF02824 TGS domain N4T40_09350 PF03819 MazG nucleotide pyrophosphohydrolase domain N4T40_09360 PF12627 Probable RNA and SrmB- binding site of polymerase A N4T40_09360 PF01743 Poly A polymerase head domain N4T40_09360 PF12626 Polymerase A arginine-rich C-terminus N4T40_09365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N4T40_09370 PF02548 Ketopantoate hydroxymethyltransferase N4T40_09375 PF02569 Pantoate-beta-alanine ligase N4T40_09380 PF03668 P-loop ATPase protein family N4T40_09385 PF00381 PTS HPr component phosphorylation site N4T40_09390 PF04751 Protein of unknown function (DUF615) N4T40_09395 PF00501 AMP-binding enzyme N4T40_09395 PF13193 AMP-binding enzyme C-terminal domain N4T40_09400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N4T40_09400 PF02824 TGS domain N4T40_09400 PF03129 Anticodon binding domain N4T40_09400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4T40_09405 PF00707 Translation initiation factor IF-3, C-terminal domain N4T40_09405 PF05198 Translation initiation factor IF-3, N-terminal domain N4T40_09410 PF00043 Glutathione S-transferase, C-terminal domain N4T40_09410 PF02798 Glutathione S-transferase, N-terminal domain N4T40_09415 PF09335 SNARE associated Golgi protein N4T40_09420 PF07690 Major Facilitator Superfamily N4T40_09430 PF01632 Ribosomal protein L35 N4T40_09435 PF00453 Ribosomal protein L20 N4T40_09450 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N4T40_09450 PF01409 tRNA synthetases class II core domain (F) N4T40_09455 PF03483 B3/4 domain N4T40_09455 PF03484 tRNA synthetase B5 domain N4T40_09455 PF03147 Ferredoxin-fold anticodon binding domain N4T40_09455 PF01588 Putative tRNA binding domain N4T40_09455 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain N4T40_09460 PF00216 Bacterial DNA-binding protein N4T40_09475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4T40_09475 PF07498 Rho termination factor, N-terminal domain N4T40_09475 PF07497 Rho termination factor, RNA-binding domain N4T40_09480 PF00085 Thioredoxin N4T40_09485 PF02541 Ppx/GppA phosphatase family N4T40_09490 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N4T40_09495 PF01171 PP-loop family N4T40_09495 PF09179 TilS substrate binding domain N4T40_09495 PF11734 TilS substrate C-terminal domain N4T40_09500 PF03807 NADP oxidoreductase coenzyme F420-dependent N4T40_09500 PF14748 Pyrroline-5-carboxylate reductase dimerisation N4T40_09505 PF02325 YGGT family N4T40_09510 PF01612 3'-5' exonuclease N4T40_09510 PF00476 DNA polymerase family A N4T40_09510 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N4T40_09510 PF01367 5'-3' exonuclease, C-terminal SAM fold N4T40_09530 PF00437 Type II/IV secretion system protein N4T40_09535 PF02566 OsmC-like protein N4T40_09540 PF01047 MarR family N4T40_09550 PF00795 Carbon-nitrogen hydrolase N4T40_09595 PF04552 Sigma-54, DNA binding domain N4T40_09595 PF00309 Sigma-54 factor, Activator interacting domain (AID) N4T40_09595 PF04963 Sigma-54 factor, core binding domain N4T40_09600 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N4T40_09605 PF01722 BolA-like protein N4T40_09610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N4T40_09615 PF01634 ATP phosphoribosyltransferase N4T40_09620 PF00815 Histidinol dehydrogenase N4T40_09625 PF00155 Aminotransferase class I and II N4T40_09630 PF04715 Anthranilate synthase component I, N terminal region N4T40_09630 PF00425 chorismate binding enzyme N4T40_09670 PF00293 NUDIX domain N4T40_09675 PF00132 Bacterial transferase hexapeptide (six repeats) N4T40_09680 PF00814 Glycoprotease family N4T40_09685 PF04445 Putative SAM-dependent methyltransferase N4T40_09695 PF00756 Putative esterase N4T40_09705 PF00834 Ribulose-phosphate 3 epimerase family N4T40_09720 PF07731 Multicopper oxidase N4T40_09720 PF07732 Multicopper oxidase N4T40_09720 PF00394 Multicopper oxidase N4T40_09735 PF00893 Small Multidrug Resistance protein N4T40_09740 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N4T40_09740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N4T40_09745 PF01960 ArgJ family N4T40_09750 PF02445 Quinolinate synthetase A protein N4T40_09775 PF00962 Adenosine/AMP deaminase N4T40_09780 PF08240 Alcohol dehydrogenase GroES-like domain N4T40_09780 PF00107 Zinc-binding dehydrogenase N4T40_09785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_09785 PF03466 LysR substrate binding domain N4T40_09790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_09790 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_09790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_09795 PF07690 Major Facilitator Superfamily N4T40_09800 PF02515 CoA-transferase family III N4T40_09810 PF00890 FAD binding domain N4T40_09810 PF14537 Cytochrome c3 N4T40_09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_09815 PF03466 LysR substrate binding domain N4T40_09825 PF07690 Major Facilitator Superfamily N4T40_09830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_09830 PF03466 LysR substrate binding domain N4T40_09855 PF01717 Cobalamin-independent synthase, Catalytic domain N4T40_09855 PF08267 Cobalamin-independent synthase, N-terminal domain N4T40_09860 PF01613 Flavin reductase like domain N4T40_09875 PF17074 Darcynin, domain of unknown function N4T40_09885 PF06594 Haemolysin-type calcium binding protein related domain N4T40_09885 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) N4T40_09890 PF17074 Darcynin, domain of unknown function N4T40_09920 PF02567 Phenazine biosynthesis-like protein N4T40_09930 PF00268 Ribonucleotide reductase, small chain N4T40_09940 PF03477 ATP cone domain N4T40_09940 PF02867 Ribonucleotide reductase, barrel domain N4T40_09940 PF00317 Ribonucleotide reductase, all-alpha domain N4T40_09950 PF00486 Transcriptional regulatory protein, C terminal N4T40_09950 PF00072 Response regulator receiver domain N4T40_09955 PF00672 HAMP domain N4T40_09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_09955 PF00512 His Kinase A (phospho-acceptor) domain N4T40_09965 PF17151 Periplasmic sensor domain N4T40_09965 PF00990 Diguanylate cyclase, GGDEF domain N4T40_09970 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 N4T40_09975 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit N4T40_09980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit N4T40_09980 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit N4T40_09990 PF10531 SLBB domain N4T40_09990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region N4T40_09990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit N4T40_09995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N4T40_09995 PF00384 Molybdopterin oxidoreductase N4T40_09995 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region N4T40_10000 PF00146 NADH dehydrogenase N4T40_10005 PF12838 4Fe-4S dicluster domain N4T40_10010 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 N4T40_10015 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L N4T40_10020 PF00361 Proton-conducting membrane transporter N4T40_10020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N4T40_10025 PF00361 Proton-conducting membrane transporter N4T40_10030 PF00361 Proton-conducting membrane transporter N4T40_10040 PF00313 'Cold-shock' DNA-binding domain N4T40_10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_10045 PF03466 LysR substrate binding domain N4T40_10050 PF00175 Oxidoreductase NAD-binding domain N4T40_10050 PF00970 Oxidoreductase FAD-binding domain N4T40_10065 PF05552 Conserved TM helix N4T40_10080 PF00291 Pyridoxal-phosphate dependent enzyme N4T40_10085 PF13533 Biotin-lipoyl like N4T40_10110 PF09334 tRNA synthetases class I (M) N4T40_10110 PF01588 Putative tRNA binding domain N4T40_10120 PF10609 NUBPL iron-transfer P-loop NTPase N4T40_10125 PF01048 Phosphorylase superfamily N4T40_10170 PF00772 DnaB-like helicase N terminal domain N4T40_10170 PF03796 DnaB-like helicase C terminal domain N4T40_10210 PF13356 Arm DNA-binding domain N4T40_10210 PF00589 Phage integrase family N4T40_10225 PF04303 PrpF protein N4T40_10230 PF00348 Polyprenyl synthetase N4T40_10235 PF04237 YjbR N4T40_10240 PF01145 SPFH domain / Band 7 family N4T40_10250 PF01734 Patatin-like phospholipase N4T40_10270 PF00884 Sulfatase N4T40_10270 PF08019 Phosphoethanolamine transferase EptA/EptB N4T40_10275 PF00486 Transcriptional regulatory protein, C terminal N4T40_10275 PF00072 Response regulator receiver domain N4T40_10280 PF08521 Two-component sensor kinase N-terminal N4T40_10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_10280 PF00512 His Kinase A (phospho-acceptor) domain N4T40_10290 PF00909 Ammonium Transporter Family N4T40_10315 PF08264 Anticodon-binding domain of tRNA N4T40_10315 PF10458 Valyl tRNA synthetase tRNA binding arm N4T40_10315 PF00133 tRNA synthetases class I (I, L, M and V) N4T40_10335 PF01906 Putative heavy-metal-binding N4T40_10340 PF01906 Putative heavy-metal-binding N4T40_10345 PF02321 Outer membrane efflux protein N4T40_10350 PF00873 AcrB/AcrD/AcrF family N4T40_10355 PF00529 HlyD membrane-fusion protein of T1SS N4T40_10355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T40_10360 PF01569 PAP2 superfamily N4T40_10365 PF09190 DALR domain N4T40_10365 PF01406 tRNA synthetases class I (C) catalytic domain N4T40_10370 PF00348 Polyprenyl synthetase N4T40_10380 PF00829 Ribosomal prokaryotic L21 protein N4T40_10385 PF01016 Ribosomal L27 protein N4T40_10390 PF03548 Outer membrane lipoprotein carrier protein LolA N4T40_10400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4T40_10400 PF02403 Seryl-tRNA synthetase N-terminal domain N4T40_10405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N4T40_10405 PF14824 Sirohaem biosynthesis protein central N4T40_10405 PF10414 Sirohaem synthase dimerisation region N4T40_10410 PF00588 SpoU rRNA Methylase family N4T40_10415 PF01638 HxlR-like helix-turn-helix N4T40_10420 PF03358 NADPH-dependent FMN reductase N4T40_10425 PF13520 Amino acid permease N4T40_10430 PF00465 Iron-containing alcohol dehydrogenase N4T40_10440 PF03099 Biotin/lipoate A/B protein ligase family N4T40_10445 PF04359 Protein of unknown function (DUF493) N4T40_10450 PF04545 Sigma-70, region 4 N4T40_10450 PF04539 Sigma-70 region 3 N4T40_10450 PF00140 Sigma-70 factor, region 1.2 N4T40_10450 PF03979 Sigma-70 factor, region 1.1 N4T40_10450 PF04542 Sigma-70 region 2 N4T40_10450 PF04546 Sigma-70, non-essential region N4T40_10465 PF00581 Rhodanese-like domain N4T40_10465 PF17773 UPF0176 acylphosphatase like domain N4T40_10475 PF00285 Citrate synthase, C-terminal domain N4T40_10480 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N4T40_10485 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N4T40_10490 PF02910 Fumarate reductase flavoprotein C-term N4T40_10490 PF00890 FAD binding domain N4T40_10495 PF13085 2Fe-2S iron-sulfur cluster binding domain N4T40_10510 PF16870 2-oxoglutarate dehydrogenase C-terminal N4T40_10510 PF16078 2-oxoglutarate dehydrogenase N-terminus N4T40_10510 PF00676 Dehydrogenase E1 component N4T40_10510 PF02779 Transketolase, pyrimidine binding domain N4T40_10515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N4T40_10515 PF00364 Biotin-requiring enzyme N4T40_10515 PF02817 e3 binding domain N4T40_10520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T40_10520 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_10525 PF00549 CoA-ligase N4T40_10525 PF08442 ATP-grasp domain N4T40_10530 PF02629 CoA binding domain N4T40_10530 PF00549 CoA-ligase N4T40_10535 PF00579 tRNA synthetases class I (W and Y) N4T40_10540 PF05661 Protein of unknown function (DUF808) N4T40_10545 PF04228 Putative neutral zinc metallopeptidase N4T40_10550 PF00999 Sodium/hydrogen exchanger family N4T40_10565 PF09587 Bacterial capsule synthesis protein PGA_cap N4T40_10575 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N4T40_10580 PF00582 Universal stress protein family N4T40_10585 PF00132 Bacterial transferase hexapeptide (six repeats) N4T40_10590 PF01272 Transcription elongation factor, GreA/GreB, C-term N4T40_10590 PF03449 Transcription elongation factor, N-terminal N4T40_10595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T40_10595 PF02142 MGS-like domain N4T40_10595 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N4T40_10600 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N4T40_10600 PF00117 Glutamine amidotransferase class-I N4T40_10615 PF01985 CRS1 / YhbY (CRM) domain N4T40_10620 PF01728 FtsJ-like methyltransferase N4T40_10625 PF00004 ATPase family associated with various cellular activities (AAA) N4T40_10625 PF17862 AAA+ lid domain N4T40_10625 PF06480 FtsH Extracellular N4T40_10625 PF01434 Peptidase family M41 N4T40_10630 PF00809 Pterin binding enzyme N4T40_10650 PF09423 PhoD-like phosphatase N4T40_10650 PF16655 PhoD-like phosphatase, N-terminal domain N4T40_10665 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N4T40_10665 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N4T40_10680 PF00083 Sugar (and other) transporter N4T40_10685 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N4T40_10685 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N4T40_10690 PF16901 C-terminal domain of alpha-glycerophosphate oxidase N4T40_10690 PF01266 FAD dependent oxidoreductase N4T40_10695 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain N4T40_10695 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain N4T40_10700 PF00781 Diacylglycerol kinase catalytic domain N4T40_10705 PF00149 Calcineurin-like phosphoesterase N4T40_10715 PF00166 Chaperonin 10 Kd subunit N4T40_10720 PF00118 TCP-1/cpn60 chaperonin family N4T40_10725 PF01219 Prokaryotic diacylglycerol kinase N4T40_10735 PF03009 Glycerophosphoryl diester phosphodiesterase family N4T40_10740 PF00873 AcrB/AcrD/AcrF family N4T40_10750 PF01435 Peptidase family M48 N4T40_10755 PF01464 Transglycosylase SLT domain N4T40_10760 PF01171 PP-loop family N4T40_10770 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T40_10770 PF01464 Transglycosylase SLT domain N4T40_10775 PF03449 Transcription elongation factor, N-terminal N4T40_10775 PF01272 Transcription elongation factor, GreA/GreB, C-term N4T40_10790 PF13737 Transposase DDE domain N4T40_10800 PF00668 Condensation domain N4T40_10800 PF00501 AMP-binding enzyme N4T40_10800 PF00975 Thioesterase domain N4T40_10800 PF13193 AMP-binding enzyme C-terminal domain N4T40_10800 PF00550 Phosphopantetheine attachment site N4T40_10810 PF09857 Putative toxin of bacterial toxin-antitoxin pair N4T40_10855 PF00881 Nitroreductase family N4T40_10870 PF02595 Glycerate kinase family N4T40_10875 PF00384 Molybdopterin oxidoreductase N4T40_10880 PF02634 FdhD/NarQ family N4T40_10885 PF06803 Protein of unknown function (DUF1232) N4T40_10890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4T40_10890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4T40_10890 PF11890 Domain of unknown function (DUF3410) N4T40_10895 PF00152 tRNA synthetases class II (D, K and N) N4T40_10905 PF18073 Rubredoxin metal binding domain N4T40_10910 PF00324 Amino acid permease N4T40_10920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N4T40_10920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N4T40_10925 PF01678 Diaminopimelate epimerase N4T40_10930 PF01810 LysE type translocator N4T40_10935 PF02899 Phage integrase, N-terminal SAM-like domain N4T40_10935 PF00589 Phage integrase family N4T40_10940 PF01012 Electron transfer flavoprotein domain N4T40_10945 PF01012 Electron transfer flavoprotein domain N4T40_10945 PF00766 Electron transfer flavoprotein FAD-binding domain N4T40_10950 PF00521 DNA gyrase/topoisomerase IV, subunit A N4T40_10950 PF03989 DNA gyrase C-terminal domain, beta-propeller N4T40_10965 PF00535 Glycosyl transferase family 2 N4T40_10985 PF13533 Biotin-lipoyl like N4T40_10995 PF00266 Aminotransferase class-V N4T40_11010 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 N4T40_11020 PF12704 MacB-like periplasmic core domain N4T40_11020 PF02687 FtsX-like permease family N4T40_11025 PF00005 ABC transporter N4T40_11030 PF03772 Competence protein N4T40_11030 PF13567 Domain of unknown function (DUF4131) N4T40_11030 PF00753 Metallo-beta-lactamase superfamily N4T40_11040 PF06965 Na+/H+ antiporter 1 N4T40_11040 PF01343 Peptidase family S49 N4T40_11045 PF12697 Alpha/beta hydrolase family N4T40_11050 PF00551 Formyl transferase N4T40_11055 PF02769 AIR synthase related protein, C-terminal domain N4T40_11055 PF00586 AIR synthase related protein, N-terminal domain N4T40_11060 PF01594 AI-2E family transporter N4T40_11065 PF00308 Bacterial dnaA protein N4T40_11065 PF08299 Bacterial dnaA protein helix-turn-helix N4T40_11065 PF11638 DnaA N-terminal domain N4T40_11095 PF00588 SpoU rRNA Methylase family N4T40_11095 PF08032 RNA 2'-O ribose methyltransferase substrate binding N4T40_11100 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain N4T40_11110 PF00691 OmpA family N4T40_11115 PF07676 WD40-like Beta Propeller Repeat N4T40_11115 PF04052 TolB amino-terminal domain N4T40_11125 PF02472 Biopolymer transport protein ExbD/TolR N4T40_11130 PF01618 MotA/TolQ/ExbB proton channel family N4T40_11135 PF03061 Thioesterase superfamily N4T40_11140 PF07687 Peptidase dimerisation domain N4T40_11140 PF01546 Peptidase family M20/M25/M40 N4T40_11145 PF05496 Holliday junction DNA helicase RuvB P-loop domain N4T40_11145 PF17864 RuvB AAA lid domain N4T40_11145 PF05491 RuvB C-terminal winged helix domain N4T40_11150 PF07499 RuvA, C-terminal domain N4T40_11150 PF01330 RuvA N terminal domain N4T40_11155 PF01966 HD domain N4T40_11160 PF02769 AIR synthase related protein, C-terminal domain N4T40_11160 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain N4T40_11160 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal N4T40_11165 PF07690 Major Facilitator Superfamily N4T40_11175 PF01784 NIF3 (NGG1p interacting factor 3) N4T40_11180 PF00378 Enoyl-CoA hydratase/isomerase N4T40_11185 PF01467 Cytidylyltransferase-like N4T40_11185 PF00293 NUDIX domain N4T40_11195 PF00578 AhpC/TSA family N4T40_11210 PF06508 Queuosine biosynthesis protein QueC N4T40_11220 PF00132 Bacterial transferase hexapeptide (six repeats) N4T40_11220 PF14602 Hexapeptide repeat of succinyl-transferase N4T40_11220 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal N4T40_11230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_11230 PF03466 LysR substrate binding domain N4T40_11235 PF00005 ABC transporter N4T40_11235 PF12857 TOBE-like domain N4T40_11240 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_11245 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_11260 PF01063 Amino-transferase class IV N4T40_11270 PF02223 Thymidylate kinase N4T40_11280 PF00890 FAD binding domain N4T40_11280 PF02910 Fumarate reductase flavoprotein C-term N4T40_11285 PF13180 PDZ domain N4T40_11295 PF06421 GTP-binding protein LepA C-terminus N4T40_11295 PF03144 Elongation factor Tu domain 2 N4T40_11295 PF00679 Elongation factor G C-terminus N4T40_11295 PF00009 Elongation factor Tu GTP binding domain N4T40_11300 PF10502 Signal peptidase, peptidase S26 N4T40_11310 PF14622 Ribonuclease-III-like N4T40_11310 PF00035 Double-stranded RNA binding motif N4T40_11315 PF01926 50S ribosome-binding GTPase N4T40_11315 PF07650 KH domain N4T40_11325 PF11967 Recombination protein O N terminal N4T40_11325 PF02565 Recombination protein O C terminal N4T40_11330 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ N4T40_11335 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) N4T40_11340 PF00106 short chain dehydrogenase N4T40_11380 PF00155 Aminotransferase class I and II N4T40_11390 PF17151 Periplasmic sensor domain N4T40_11390 PF00990 Diguanylate cyclase, GGDEF domain N4T40_11395 PF00665 Integrase core domain N4T40_11395 PF13936 Helix-turn-helix domain N4T40_11405 PF00271 Helicase conserved C-terminal domain N4T40_11405 PF04851 Type III restriction enzyme, res subunit N4T40_11405 PF02151 UvrB/uvrC motif N4T40_11405 PF12344 Ultra-violet resistance protein B N4T40_11405 PF17757 UvrB interaction domain N4T40_11415 PF00892 EamA-like transporter family N4T40_11420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N4T40_11420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N4T40_11435 PF01018 GTP1/OBG N4T40_11435 PF01926 50S ribosome-binding GTPase N4T40_11440 PF00696 Amino acid kinase family N4T40_11440 PF01472 PUA domain N4T40_11450 PF07759 Protein of unknown function (DUF1615) N4T40_11455 PF01207 Dihydrouridine synthase (Dus) N4T40_11460 PF03060 Nitronate monooxygenase N4T40_11475 PF02350 UDP-N-acetylglucosamine 2-epimerase N4T40_11505 PF00875 DNA photolyase N4T40_11505 PF03441 FAD binding domain of DNA photolyase N4T40_11510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T40_11515 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_11520 PF07943 Penicillin-binding protein 5, C-terminal domain N4T40_11520 PF00768 D-alanyl-D-alanine carboxypeptidase N4T40_11530 PF03971 Monomeric isocitrate dehydrogenase N4T40_11535 PF00849 RNA pseudouridylate synthase N4T40_11540 PF00180 Isocitrate/isopropylmalate dehydrogenase N4T40_11560 PF06779 Uncharacterised MFS-type transporter YbfB N4T40_11565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_11565 PF03466 LysR substrate binding domain N4T40_11570 PF00375 Sodium:dicarboxylate symporter family N4T40_11575 PF02567 Phenazine biosynthesis-like protein N4T40_11580 PF00675 Insulinase (Peptidase family M16) N4T40_11580 PF05193 Peptidase M16 inactive domain N4T40_11605 PF02581 Thiamine monophosphate synthase N4T40_11610 PF00202 Aminotransferase class-III N4T40_11620 PF00849 RNA pseudouridylate synthase N4T40_11625 PF18337 RapA N-terminal Tudor like domain N4T40_11625 PF18339 RapA N-terminal Tudor like domain 1 N4T40_11625 PF00176 SNF2 family N-terminal domain N4T40_11625 PF12137 RNA polymerase recycling family C-terminal N4T40_11625 PF00271 Helicase conserved C-terminal domain N4T40_11635 PF00440 Bacterial regulatory proteins, tetR family N4T40_11640 PF00175 Oxidoreductase NAD-binding domain N4T40_11640 PF00970 Oxidoreductase FAD-binding domain N4T40_11640 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T40_11645 PF00487 Fatty acid desaturase N4T40_11655 PF00440 Bacterial regulatory proteins, tetR family N4T40_11655 PF17754 MftR C-terminal domain N4T40_11665 PF00202 Aminotransferase class-III N4T40_11670 PF00282 Pyridoxal-dependent decarboxylase conserved domain N4T40_11675 PF00171 Aldehyde dehydrogenase family N4T40_11680 PF01037 Lrp/AsnC ligand binding domain N4T40_11685 PF00205 Thiamine pyrophosphate enzyme, central domain N4T40_11685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4T40_11685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4T40_11690 PF00324 Amino acid permease N4T40_11695 PF12849 PBP superfamily domain N4T40_11700 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_11710 PF00005 ABC transporter N4T40_11715 PF01343 Peptidase family S49 N4T40_11715 PF08496 Peptidase family S49 N-terminal N4T40_11730 PF00206 Lyase N4T40_11730 PF08328 Adenylosuccinate lyase C-terminal N4T40_11735 PF04356 Protein of unknown function (DUF489) N4T40_11750 PF00132 Bacterial transferase hexapeptide (six repeats) N4T40_11755 PF00768 D-alanyl-D-alanine carboxypeptidase N4T40_11755 PF07943 Penicillin-binding protein 5, C-terminal domain N4T40_11770 PF01975 Survival protein SurE N4T40_11775 PF01476 LysM domain N4T40_11775 PF01551 Peptidase family M23 N4T40_11780 PF03466 LysR substrate binding domain N4T40_11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_11785 PF13654 AAA domain N4T40_11785 PF05362 Lon protease (S16) C-terminal proteolytic domain N4T40_11790 PF07690 Major Facilitator Superfamily N4T40_11795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T40_11800 PF13593 SBF-like CPA transporter family (DUF4137) N4T40_11805 PF01197 Ribosomal protein L31 N4T40_11810 PF00563 EAL domain N4T40_11810 PF12792 CSS motif domain associated with EAL N4T40_11820 PF04055 Radical SAM superfamily N4T40_11825 PF09285 Elongation factor P, C-terminal N4T40_11825 PF01132 Elongation factor P (EF-P) OB domain N4T40_11825 PF08207 Elongation factor P (EF-P) KOW-like domain N4T40_11830 PF13722 5TM C-terminal transporter carbon starvation CstA N4T40_11830 PF02554 Carbon starvation protein CstA N4T40_11835 PF04328 Selenoprotein, putative N4T40_11855 PF02678 Pirin N4T40_11855 PF17954 Quercetinase C-terminal cupin domain N4T40_11860 PF00291 Pyridoxal-phosphate dependent enzyme N4T40_11865 PF08348 YheO-like PAS domain N4T40_11865 PF13309 HTH domain N4T40_11875 PF13193 AMP-binding enzyme C-terminal domain N4T40_11875 PF00501 AMP-binding enzyme N4T40_11875 PF00668 Condensation domain N4T40_11875 PF00550 Phosphopantetheine attachment site N4T40_11880 PF00550 Phosphopantetheine attachment site N4T40_11880 PF00668 Condensation domain N4T40_11880 PF13193 AMP-binding enzyme C-terminal domain N4T40_11880 PF00501 AMP-binding enzyme N4T40_11880 PF00975 Thioesterase domain N4T40_11885 PF01032 FecCD transport family N4T40_11890 PF01032 FecCD transport family N4T40_11895 PF00005 ABC transporter N4T40_11900 PF01497 Periplasmic binding protein N4T40_11905 PF00593 TonB dependent receptor N4T40_11905 PF07715 TonB-dependent Receptor Plug Domain N4T40_11910 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) N4T40_11915 PF00550 Phosphopantetheine attachment site N4T40_11915 PF00668 Condensation domain N4T40_11915 PF00501 AMP-binding enzyme N4T40_11920 PF13193 AMP-binding enzyme C-terminal domain N4T40_11920 PF00501 AMP-binding enzyme N4T40_11925 PF00550 Phosphopantetheine attachment site N4T40_11925 PF00857 Isochorismatase family N4T40_11930 PF00282 Pyridoxal-dependent decarboxylase conserved domain N4T40_11935 PF00664 ABC transporter transmembrane region N4T40_11935 PF00005 ABC transporter N4T40_11940 PF00005 ABC transporter N4T40_11945 PF00975 Thioesterase domain N4T40_11955 PF00425 chorismate binding enzyme N4T40_11965 PF01208 Uroporphyrinogen decarboxylase (URO-D) N4T40_11970 PF05675 Protein of unknown function (DUF817) N4T40_11985 PF00144 Beta-lactamase N4T40_11995 PF01227 GTP cyclohydrolase I N4T40_12000 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T40_12000 PF01799 [2Fe-2S] binding domain N4T40_12005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase N4T40_12005 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain N4T40_12020 PF00218 Indole-3-glycerol phosphate synthase N4T40_12025 PF02885 Glycosyl transferase family, helical bundle domain N4T40_12025 PF00591 Glycosyl transferase family, a/b domain N4T40_12030 PF07715 TonB-dependent Receptor Plug Domain N4T40_12030 PF00593 TonB dependent receptor N4T40_12035 PF11838 ERAP1-like C-terminal domain N4T40_12035 PF01433 Peptidase family M1 domain N4T40_12040 PF00117 Glutamine amidotransferase class-I N4T40_12335 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system N4T40_12410 PF00589 Phage integrase family N4T40_12410 PF13356 Arm DNA-binding domain N4T40_12420 PF00854 POT family N4T40_12425 PF00120 Glutamine synthetase, catalytic domain N4T40_12425 PF03951 Glutamine synthetase, beta-Grasp domain N4T40_12430 PF04345 Chorismate lyase N4T40_12435 PF01040 UbiA prenyltransferase family N4T40_12470 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N4T40_12470 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N4T40_12475 PF01784 NIF3 (NGG1p interacting factor 3) N4T40_12480 PF13180 PDZ domain N4T40_12485 PF01743 Poly A polymerase head domain N4T40_12485 PF12627 Probable RNA and SrmB- binding site of polymerase A N4T40_12490 PF00390 Malic enzyme, N-terminal domain N4T40_12490 PF03949 Malic enzyme, NAD binding domain N4T40_12490 PF01515 Phosphate acetyl/butaryl transferase N4T40_12500 PF13737 Transposase DDE domain N4T40_12510 PF04452 RNA methyltransferase N4T40_12515 PF02219 Methylenetetrahydrofolate reductase N4T40_12520 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain N4T40_12520 PF05221 S-adenosyl-L-homocysteine hydrolase N4T40_12535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_12535 PF09317 Domain of unknown function (DUF1974) N4T40_12535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_12540 PF04055 Radical SAM superfamily N4T40_12545 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_12545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T40_12555 PF07690 Major Facilitator Superfamily N4T40_12565 PF00557 Metallopeptidase family M24 N4T40_12570 PF00318 Ribosomal protein S2 N4T40_12575 PF00889 Elongation factor TS N4T40_12585 PF12833 Helix-turn-helix domain N4T40_12605 PF03330 Lytic transglycolase N4T40_12605 PF05036 Sporulation related domain N4T40_12610 PF13406 Transglycosylase SLT domain N4T40_12615 PF01098 Cell cycle protein N4T40_12625 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term N4T40_12625 PF14489 QueF-like protein N4T40_12630 PF01061 ABC-2 type transporter N4T40_12635 PF00005 ABC transporter N4T40_12640 PF00589 Phage integrase family N4T40_12740 PF14528 LAGLIDADG-like domain N4T40_12740 PF03796 DnaB-like helicase C terminal domain N4T40_12740 PF00772 DnaB-like helicase N terminal domain N4T40_12950 PF08525 Opacity-associated protein A N-terminal motif N4T40_12950 PF01551 Peptidase family M23 N4T40_12950 PF01476 LysM domain N4T40_13055 PF00464 Serine hydroxymethyltransferase N4T40_13060 PF02321 Outer membrane efflux protein N4T40_13070 PF13533 Biotin-lipoyl like N4T40_13090 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T40_13095 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_13100 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_13105 PF00005 ABC transporter N4T40_13110 PF00893 Small Multidrug Resistance protein N4T40_13115 PF00037 4Fe-4S binding domain N4T40_13125 PF00155 Aminotransferase class I and II N4T40_13125 PF00392 Bacterial regulatory proteins, gntR family N4T40_13130 PF02567 Phenazine biosynthesis-like protein N4T40_13135 PF00175 Oxidoreductase NAD-binding domain N4T40_13135 PF00970 Oxidoreductase FAD-binding domain N4T40_13140 PF01980 tRNA-methyltransferase O N4T40_13140 PF18389 TrmO C-terminal domain N4T40_13150 PF00437 Type II/IV secretion system protein N4T40_13150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N4T40_13160 PF00072 Response regulator receiver domain N4T40_13160 PF00486 Transcriptional regulatory protein, C terminal N4T40_13165 PF08521 Two-component sensor kinase N-terminal N4T40_13165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_13165 PF00512 His Kinase A (phospho-acceptor) domain N4T40_13175 PF00293 NUDIX domain N4T40_13185 PF14814 Bifunctional transglycosylase second domain N4T40_13185 PF00905 Penicillin binding protein transpeptidase domain N4T40_13185 PF00912 Transglycosylase N4T40_13190 PF01513 ATP-NAD kinase N4T40_13195 PF07023 Protein of unknown function (DUF1315) N4T40_13200 PF02885 Glycosyl transferase family, helical bundle domain N4T40_13200 PF00591 Glycosyl transferase family, a/b domain N4T40_13205 PF00375 Sodium:dicarboxylate symporter family N4T40_13210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_13210 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_13210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_13215 PF00756 Putative esterase N4T40_13220 PF01817 Chorismate mutase type II N4T40_13220 PF01842 ACT domain N4T40_13220 PF00800 Prephenate dehydratase N4T40_13225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N4T40_13235 PF01546 Peptidase family M20/M25/M40 N4T40_13235 PF07687 Peptidase dimerisation domain N4T40_13240 PF00753 Metallo-beta-lactamase superfamily N4T40_13250 PF03883 Peroxide stress protein YaaA N4T40_13260 PF05690 Thiazole biosynthesis protein ThiG N4T40_13270 PF04241 Protein of unknown function (DUF423) N4T40_13275 PF04542 Sigma-70 region 2 N4T40_13275 PF00140 Sigma-70 factor, region 1.2 N4T40_13275 PF04545 Sigma-70, region 4 N4T40_13290 PF00313 'Cold-shock' DNA-binding domain N4T40_13295 PF00270 DEAD/DEAH box helicase N4T40_13295 PF00271 Helicase conserved C-terminal domain N4T40_13305 PF00881 Nitroreductase family N4T40_13310 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N4T40_13310 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N4T40_13330 PF01180 Dihydroorotate dehydrogenase N4T40_13335 PF02674 Colicin V production protein N4T40_13340 PF00156 Phosphoribosyl transferase domain N4T40_13355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4T40_13355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4T40_13360 PF01435 Peptidase family M48 N4T40_13365 PF09424 Yqey-like protein N4T40_13370 PF01165 Ribosomal protein S21 N4T40_13375 PF00814 Glycoprotease family N4T40_13395 PF00069 Protein kinase domain N4T40_13430 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB N4T40_13430 PF17287 POTRA domain N4T40_13430 PF08479 POTRA domain, ShlB-type N4T40_13435 PF13332 Hemagglutinin repeat N4T40_13435 PF13018 Extended Signal Peptide of Type V secretion system N4T40_13435 PF05860 haemagglutination activity domain N4T40_13435 PF04829 Pre-toxin domain with VENN motif N4T40_13435 PF04829 Pre-toxin domain with VENN motif N4T40_13435 PF05860 haemagglutination activity domain N4T40_13435 PF13332 Hemagglutinin repeat N4T40_13435 PF13018 Extended Signal Peptide of Type V secretion system N4T40_13470 PF03466 LysR substrate binding domain N4T40_13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_13480 PF00171 Aldehyde dehydrogenase family N4T40_13485 PF00324 Amino acid permease N4T40_13515 PF04076 Bacterial OB fold (BOF) protein N4T40_13540 PF00561 alpha/beta hydrolase fold N4T40_13545 PF03616 Sodium/glutamate symporter N4T40_13555 PF07729 FCD domain N4T40_13555 PF00392 Bacterial regulatory proteins, gntR family N4T40_13605 PF00083 Sugar (and other) transporter N4T40_13605 PF08946 Osmosensory transporter coiled coil N4T40_13625 PF00665 Integrase core domain N4T40_13625 PF13936 Helix-turn-helix domain N4T40_13635 PF00155 Aminotransferase class I and II N4T40_13640 PF06826 Predicted Permease Membrane Region N4T40_13640 PF02080 TrkA-C domain N4T40_13650 PF04403 Paraquat-inducible protein A N4T40_13655 PF02470 MlaD protein N4T40_13665 PF01177 Asp/Glu/Hydantoin racemase N4T40_13670 PF00892 EamA-like transporter family N4T40_13675 PF13737 Transposase DDE domain N4T40_13680 PF07995 Glucose / Sorbosone dehydrogenase N4T40_13700 PF00375 Sodium:dicarboxylate symporter family N4T40_13710 PF16123 Hydroxyacylglutathione hydrolase C-terminus N4T40_13710 PF00753 Metallo-beta-lactamase superfamily N4T40_13715 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_13720 PF00005 ABC transporter N4T40_13720 PF09383 NIL domain N4T40_13725 PF03180 NLPA lipoprotein N4T40_13730 PF02843 Phosphoribosylglycinamide synthetase, C domain N4T40_13730 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N4T40_13730 PF02844 Phosphoribosylglycinamide synthetase, N domain N4T40_13735 PF01808 AICARFT/IMPCHase bienzyme N4T40_13735 PF02142 MGS-like domain N4T40_13740 PF02954 Bacterial regulatory protein, Fis family N4T40_13760 PF13932 GidA associated domain N4T40_13760 PF01134 Glucose inhibited division protein A N4T40_13770 PF14403 Circularly permuted ATP-grasp type 2 N4T40_13780 PF08379 Bacterial transglutaminase-like N-terminal region N4T40_13780 PF01841 Transglutaminase-like superfamily N4T40_13790 PF01168 Alanine racemase, N-terminal domain N4T40_13790 PF00842 Alanine racemase, C-terminal domain N4T40_13795 PF03796 DnaB-like helicase C terminal domain N4T40_13795 PF00772 DnaB-like helicase N terminal domain N4T40_13800 PF01281 Ribosomal protein L9, N-terminal domain N4T40_13800 PF03948 Ribosomal protein L9, C-terminal domain N4T40_13805 PF01084 Ribosomal protein S18 N4T40_13810 PF01250 Ribosomal protein S6 N4T40_13815 PF01040 UbiA prenyltransferase family N4T40_13820 PF03626 Prokaryotic Cytochrome C oxidase subunit IV N4T40_13825 PF00510 Cytochrome c oxidase subunit III N4T40_13830 PF00115 Cytochrome C and Quinol oxidase polypeptide I N4T40_13835 PF00116 Cytochrome C oxidase subunit II, periplasmic domain N4T40_13835 PF06481 COX Aromatic Rich Motif N4T40_13845 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain N4T40_13845 PF02896 PEP-utilising enzyme, TIM barrel domain N4T40_13845 PF00391 PEP-utilising enzyme, mobile domain N4T40_13850 PF03618 Kinase/pyrophosphorylase N4T40_13865 PF00535 Glycosyl transferase family 2 N4T40_13870 PF13994 PgaD-like protein N4T40_13880 PF00296 Luciferase-like monooxygenase N4T40_13895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_13895 PF03466 LysR substrate binding domain N4T40_13905 PF03462 PCRF domain N4T40_13905 PF00472 RF-1 domain N4T40_13910 PF17827 PrmC N-terminal domain N4T40_13910 PF13847 Methyltransferase domain N4T40_13915 PF12833 Helix-turn-helix domain N4T40_13920 PF00106 short chain dehydrogenase N4T40_13925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_13925 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_13925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_13930 PF13193 AMP-binding enzyme C-terminal domain N4T40_13930 PF00501 AMP-binding enzyme N4T40_13935 PF01613 Flavin reductase like domain N4T40_13940 PF00899 ThiF family N4T40_13945 PF03109 ABC1 family N4T40_13960 PF03814 Potassium-transporting ATPase A subunit N4T40_13970 PF02669 K+-transporting ATPase, c chain N4T40_13975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_13975 PF00512 His Kinase A (phospho-acceptor) domain N4T40_13975 PF02702 Osmosensitive K+ channel His kinase sensor domain N4T40_13975 PF13493 Domain of unknown function (DUF4118) N4T40_13980 PF00072 Response regulator receiver domain N4T40_13980 PF00486 Transcriptional regulatory protein, C terminal N4T40_13985 PF00120 Glutamine synthetase, catalytic domain N4T40_13995 PF03232 Ubiquinone biosynthesis protein COQ7 N4T40_14000 PF07690 Major Facilitator Superfamily N4T40_14005 PF01103 Surface antigen N4T40_14005 PF17243 POTRA domain TamA domain 1 N4T40_14005 PF07244 Surface antigen variable number repeat N4T40_14045 PF00929 Exonuclease N4T40_14130 PF00145 C-5 cytosine-specific DNA methylase N4T40_14140 PF01695 IstB-like ATP binding protein N4T40_14360 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N4T40_14400 PF02767 DNA polymerase III beta subunit, central domain N4T40_14400 PF00712 DNA polymerase III beta subunit, N-terminal domain N4T40_14400 PF02768 DNA polymerase III beta subunit, C-terminal domain N4T40_14430 PF13005 zinc-finger binding domain of transposase IS66 N4T40_14430 PF13007 Transposase C of IS166 homeodomain N4T40_14430 PF13817 IS66 C-terminal element N4T40_14430 PF03050 Transposase IS66 family N4T40_14450 PF13936 Helix-turn-helix domain N4T40_14450 PF00665 Integrase core domain N4T40_14505 PF00817 impB/mucB/samB family N4T40_14505 PF11798 IMS family HHH motif N4T40_14505 PF13438 Domain of unknown function (DUF4113) N4T40_14505 PF11799 impB/mucB/samB family C-terminal domain N4T40_14510 PF00717 Peptidase S24-like N4T40_14520 PF11791 Aconitate B N-terminal domain N4T40_14520 PF06434 Aconitate hydratase 2 N-terminus N4T40_14520 PF00330 Aconitase family (aconitate hydratase) N4T40_14530 PF00520 Ion transport protein N4T40_14530 PF00027 Cyclic nucleotide-binding domain N4T40_14535 PF07690 Major Facilitator Superfamily N4T40_14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_14550 PF03466 LysR substrate binding domain N4T40_14555 PF04284 Protein of unknown function (DUF441) N4T40_14565 PF00849 RNA pseudouridylate synthase N4T40_14565 PF01479 S4 domain N4T40_14580 PF00849 RNA pseudouridylate synthase N4T40_14580 PF01479 S4 domain N4T40_14585 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE N4T40_14590 PF08676 MutL C terminal dimerisation domain N4T40_14590 PF01119 DNA mismatch repair protein, C-terminal domain N4T40_14600 PF17209 Hfq protein N4T40_14610 PF00881 Nitroreductase family N4T40_14620 PF00149 Calcineurin-like phosphoesterase N4T40_14625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N4T40_14630 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain N4T40_14630 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4T40_14635 PF00958 GMP synthase C terminal domain N4T40_14635 PF00117 Glutamine amidotransferase class-I N4T40_14635 PF02540 NAD synthase N4T40_14640 PF05985 Ethanolamine ammonia-lyase light chain (EutC) N4T40_14645 PF06751 Ethanolamine ammonia lyase large subunit (EutB) N4T40_14650 PF13520 Amino acid permease N4T40_14655 PF00171 Aldehyde dehydrogenase family N4T40_14670 PF00465 Iron-containing alcohol dehydrogenase N4T40_14675 PF14493 Helix-turn-helix domain N4T40_14675 PF05970 PIF1-like helicase N4T40_14685 PF02110 Hydroxyethylthiazole kinase family N4T40_14700 PF17432 Domain of unknown function (DUF3458_C) ARM repeats N4T40_14700 PF01433 Peptidase family M1 domain N4T40_14700 PF11940 Domain of unknown function (DUF3458) Ig-like fold N4T40_14720 PF01817 Chorismate mutase type II N4T40_14725 PF01037 Lrp/AsnC ligand binding domain N4T40_14740 PF00440 Bacterial regulatory proteins, tetR family N4T40_14745 PF00593 TonB dependent receptor N4T40_14745 PF07715 TonB-dependent Receptor Plug Domain N4T40_14750 PF00924 Mechanosensitive ion channel N4T40_14780 PF00593 TonB dependent receptor N4T40_14780 PF07715 TonB-dependent Receptor Plug Domain N4T40_14800 PF12848 ABC transporter N4T40_14800 PF00005 ABC transporter N4T40_14805 PF00582 Universal stress protein family N4T40_14840 PF02308 MgtC family N4T40_14845 PF03594 Benzoate membrane transport protein N4T40_14850 PF01037 Lrp/AsnC ligand binding domain N4T40_14855 PF01810 LysE type translocator N4T40_14860 PF00923 Transaldolase/Fructose-6-phosphate aldolase N4T40_14865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_14865 PF03466 LysR substrate binding domain N4T40_14875 PF02803 Thiolase, C-terminal domain N4T40_14875 PF00108 Thiolase, N-terminal domain N4T40_14885 PF01575 MaoC like domain N4T40_14890 PF00144 Beta-lactamase N4T40_14900 PF07690 Major Facilitator Superfamily N4T40_14905 PF12169 DNA polymerase III subunits gamma and tau domain III N4T40_14905 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding N4T40_14905 PF12170 DNA polymerase III tau subunit V interacting with alpha N4T40_14910 PF05506 Domain of unknown function (DUF756) N4T40_14910 PF04185 Phosphoesterase family N4T40_14915 PF03061 Thioesterase superfamily N4T40_14920 PF00465 Iron-containing alcohol dehydrogenase N4T40_14930 PF01451 Low molecular weight phosphotyrosine protein phosphatase N4T40_14935 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N4T40_14935 PF01565 FAD binding domain N4T40_14950 PF01645 Conserved region in glutamate synthase N4T40_14970 PF12832 MFS_1 like family N4T40_14980 PF02785 Biotin carboxylase C-terminal domain N4T40_14980 PF00289 Biotin carboxylase, N-terminal domain N4T40_14980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T40_14985 PF00364 Biotin-requiring enzyme N4T40_14990 PF01220 Dehydroquinase class II N4T40_14995 PF11799 impB/mucB/samB family C-terminal domain N4T40_14995 PF13438 Domain of unknown function (DUF4113) N4T40_14995 PF00817 impB/mucB/samB family N4T40_15000 PF00005 ABC transporter N4T40_15005 PF00072 Response regulator receiver domain N4T40_15005 PF00486 Transcriptional regulatory protein, C terminal N4T40_15015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N4T40_15015 PF04324 BFD-like [2Fe-2S] binding domain N4T40_15015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N4T40_15015 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_15015 PF13806 Rieske-like [2Fe-2S] domain N4T40_15015 PF18267 Rubredoxin NAD+ reductase C-terminal domain N4T40_15020 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_15020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N4T40_15020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N4T40_15020 PF18267 Rubredoxin NAD+ reductase C-terminal domain N4T40_15020 PF04324 BFD-like [2Fe-2S] binding domain N4T40_15025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N4T40_15025 PF00384 Molybdopterin oxidoreductase N4T40_15025 PF01568 Molydopterin dinucleotide binding domain N4T40_15025 PF04324 BFD-like [2Fe-2S] binding domain N4T40_15030 PF12804 MobA-like NTP transferase domain N4T40_15035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N4T40_15035 PF00384 Molybdopterin oxidoreductase N4T40_15035 PF01568 Molydopterin dinucleotide binding domain N4T40_15040 PF06463 Molybdenum Cofactor Synthesis C N4T40_15040 PF04055 Radical SAM superfamily N4T40_15050 PF02391 MoaE protein N4T40_15055 PF01967 MoaC family N4T40_15055 PF00994 Probable molybdopterin binding domain N4T40_15060 PF00994 Probable molybdopterin binding domain N4T40_15060 PF03453 MoeA N-terminal region (domain I and II) N4T40_15060 PF03454 MoeA C-terminal region (domain IV) N4T40_15065 PF01638 HxlR-like helix-turn-helix N4T40_15070 PF00392 Bacterial regulatory proteins, gntR family N4T40_15070 PF00155 Aminotransferase class I and II N4T40_15075 PF00892 EamA-like transporter family N4T40_15095 PF02635 DsrE/DsrF-like family N4T40_15100 PF16363 GDP-mannose 4,6 dehydratase N4T40_15105 PF10415 Fumarase C C-terminus N4T40_15105 PF00206 Lyase N4T40_15125 PF01266 FAD dependent oxidoreductase N4T40_15135 PF02542 YgbB family N4T40_15145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N4T40_15145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N4T40_15150 PF00440 Bacterial regulatory proteins, tetR family N4T40_15155 PF02954 Bacterial regulatory protein, Fis family N4T40_15155 PF00158 Sigma-54 interaction domain N4T40_15155 PF00072 Response regulator receiver domain N4T40_15160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_15160 PF00512 His Kinase A (phospho-acceptor) domain N4T40_15160 PF00989 PAS fold N4T40_15170 PF04055 Radical SAM superfamily N4T40_15170 PF18693 TRAM domain N4T40_15170 PF00919 Uncharacterized protein family UPF0004 N4T40_15175 PF00696 Amino acid kinase family N4T40_15180 PF01765 Ribosome recycling factor N4T40_15185 PF01255 Putative undecaprenyl diphosphate synthase N4T40_15195 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N4T40_15195 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N4T40_15195 PF13288 DXP reductoisomerase C-terminal domain N4T40_15200 PF13180 PDZ domain N4T40_15200 PF17820 PDZ domain N4T40_15200 PF02163 Peptidase family M50 N4T40_15205 PF07244 Surface antigen variable number repeat N4T40_15205 PF01103 Surface antigen N4T40_15215 PF00132 Bacterial transferase hexapeptide (six repeats) N4T40_15215 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N4T40_15220 PF07977 FabA-like domain N4T40_15225 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 N4T40_15225 PF00132 Bacterial transferase hexapeptide (six repeats) N4T40_15240 PF02631 RecX family N4T40_15245 PF00154 recA bacterial DNA recombination protein N4T40_15250 PF01479 S4 domain N4T40_15255 PF13419 Haloacid dehalogenase-like hydrolase N4T40_15280 PF01037 Lrp/AsnC ligand binding domain N4T40_15285 PF00266 Aminotransferase class-V N4T40_15290 PF00324 Amino acid permease N4T40_15305 PF00082 Subtilase family N4T40_15305 PF05922 Peptidase inhibitor I9 N4T40_15310 PF00916 Sulfate permease family N4T40_15310 PF01740 STAS domain N4T40_15315 PF02586 SOS response associated peptidase (SRAP) N4T40_15320 PF07995 Glucose / Sorbosone dehydrogenase N4T40_15330 PF00563 EAL domain N4T40_15330 PF00990 Diguanylate cyclase, GGDEF domain N4T40_15330 PF03707 Bacterial signalling protein N terminal repeat N4T40_15350 PF02378 Phosphotransferase system, EIIC N4T40_15350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N4T40_15355 PF00294 pfkB family carbohydrate kinase N4T40_15360 PF05524 PEP-utilising enzyme, N-terminal N4T40_15360 PF00391 PEP-utilising enzyme, mobile domain N4T40_15360 PF02896 PEP-utilising enzyme, TIM barrel domain N4T40_15360 PF00381 PTS HPr component phosphorylation site N4T40_15360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N4T40_15385 PF05525 Branched-chain amino acid transport protein N4T40_15390 PF00557 Metallopeptidase family M24 N4T40_15395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_15395 PF03466 LysR substrate binding domain N4T40_15405 PF00462 Glutaredoxin N4T40_15410 PF00202 Aminotransferase class-III N4T40_15415 PF00571 CBS domain N4T40_15415 PF00478 IMP dehydrogenase / GMP reductase domain N4T40_15440 PF00448 SRP54-type protein, GTPase domain N4T40_15440 PF02881 SRP54-type protein, helical bundle domain N4T40_15450 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N4T40_15465 PF08173 Membrane bound YbgT-like protein N4T40_15470 PF02322 Cytochrome bd terminal oxidase subunit II N4T40_15475 PF01654 Cytochrome bd terminal oxidase subunit I N4T40_15490 PF07290 Protein of unknown function (DUF1449) N4T40_15500 PF00294 pfkB family carbohydrate kinase N4T40_15510 PF07715 TonB-dependent Receptor Plug Domain N4T40_15510 PF00593 TonB dependent receptor N4T40_15515 PF08367 Peptidase M16C associated N4T40_15515 PF00675 Insulinase (Peptidase family M16) N4T40_15515 PF05193 Peptidase M16 inactive domain N4T40_15520 PF02253 Phospholipase A1 N4T40_15525 PF02386 Cation transport protein N4T40_15530 PF02080 TrkA-C domain N4T40_15530 PF02254 TrkA-N domain N4T40_15535 PF00585 C-terminal regulatory domain of Threonine dehydratase N4T40_15535 PF00291 Pyridoxal-phosphate dependent enzyme N4T40_15540 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N4T40_15565 PF01118 Semialdehyde dehydrogenase, NAD binding domain N4T40_15565 PF02774 Semialdehyde dehydrogenase, dimerisation domain N4T40_15575 PF02617 ATP-dependent Clp protease adaptor protein ClpS N4T40_15580 PF00004 ATPase family associated with various cellular activities (AAA) N4T40_15580 PF07724 AAA domain (Cdc48 subfamily) N4T40_15580 PF17871 AAA lid domain N4T40_15580 PF02861 Clp amino terminal domain, pathogenicity island component N4T40_15580 PF10431 C-terminal, D2-small domain, of ClpB protein N4T40_15585 PF02694 Uncharacterised BCR, YnfA/UPF0060 family N4T40_15590 PF00793 DAHP synthetase I family N4T40_15605 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_15605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T40_15635 PF06418 CTP synthase N-terminus N4T40_15635 PF00117 Glutamine amidotransferase class-I N4T40_15640 PF00793 DAHP synthetase I family N4T40_15645 PF00113 Enolase, C-terminal TIM barrel domain N4T40_15645 PF03952 Enolase, N-terminal domain N4T40_15650 PF04239 Protein of unknown function (DUF421) N4T40_15655 PF04977 Septum formation initiator N4T40_15660 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N4T40_15665 PF01144 Coenzyme A transferase N4T40_15670 PF01144 Coenzyme A transferase N4T40_15675 PF02803 Thiolase, C-terminal domain N4T40_15675 PF00108 Thiolase, N-terminal domain N4T40_15680 PF00206 Lyase N4T40_15680 PF10397 Adenylosuccinate lyase C-terminus N4T40_15685 PF00561 alpha/beta hydrolase fold N4T40_15690 PF07690 Major Facilitator Superfamily N4T40_15695 PF02627 Carboxymuconolactone decarboxylase family N4T40_15700 PF00775 Dioxygenase N4T40_15700 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal N4T40_15705 PF00775 Dioxygenase N4T40_15710 PF01487 Type I 3-dehydroquinase N4T40_15715 PF05048 Periplasmic copper-binding protein (NosD) N4T40_15720 PF04966 Carbohydrate-selective porin, OprB family N4T40_15725 PF01011 PQQ enzyme repeat N4T40_15725 PF13360 PQQ-like domain N4T40_15735 PF13340 Putative transposase of IS4/5 family (DUF4096) N4T40_15740 PF04143 Sulphur transport N4T40_15750 PF00753 Metallo-beta-lactamase superfamily N4T40_15755 PF01614 Bacterial transcriptional regulator N4T40_15755 PF09339 IclR helix-turn-helix domain N4T40_15760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_15760 PF03466 LysR substrate binding domain N4T40_15765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_15765 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_15765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_15780 PF00106 short chain dehydrogenase N4T40_15835 PF04909 Amidohydrolase N4T40_15845 PF07702 UTRA domain N4T40_15845 PF00392 Bacterial regulatory proteins, gntR family N4T40_15850 PF08450 SMP-30/Gluconolactonase/LRE-like region N4T40_15860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_15860 PF03466 LysR substrate binding domain N4T40_15875 PF13533 Biotin-lipoyl like N4T40_15890 PF12833 Helix-turn-helix domain N4T40_15890 PF00072 Response regulator receiver domain N4T40_15895 PF01266 FAD dependent oxidoreductase N4T40_15905 PF00893 Small Multidrug Resistance protein N4T40_15930 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T40_15935 PF01613 Flavin reductase like domain N4T40_15940 PF01047 MarR family N4T40_15945 PF00171 Aldehyde dehydrogenase family N4T40_15950 PF00920 Dehydratase family N4T40_15960 PF03466 LysR substrate binding domain N4T40_15960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_15965 PF01370 NAD dependent epimerase/dehydratase family N4T40_15970 PF07690 Major Facilitator Superfamily N4T40_15975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N4T40_15975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N4T40_15980 PF06719 AraC-type transcriptional regulator N-terminus N4T40_15980 PF12833 Helix-turn-helix domain N4T40_15985 PF00107 Zinc-binding dehydrogenase N4T40_15985 PF08240 Alcohol dehydrogenase GroES-like domain N4T40_15995 PF01032 FecCD transport family N4T40_16000 PF00005 ABC transporter N4T40_16020 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N4T40_16020 PF14572 Phosphoribosyl synthetase-associated domain N4T40_16025 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family N4T40_16055 PF00196 Bacterial regulatory proteins, luxR family N4T40_16065 PF00665 Integrase core domain N4T40_16065 PF13936 Helix-turn-helix domain N4T40_16075 PF13737 Transposase DDE domain N4T40_16085 PF07690 Major Facilitator Superfamily N4T40_16110 PF01975 Survival protein SurE N4T40_16120 PF02824 TGS domain N4T40_16120 PF13291 ACT domain N4T40_16120 PF04607 Region found in RelA / SpoT proteins N4T40_16130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_16135 PF07690 Major Facilitator Superfamily N4T40_16155 PF00672 HAMP domain N4T40_16155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_16155 PF00512 His Kinase A (phospho-acceptor) domain N4T40_16155 PF16527 Two-component sensor protein CpxA, periplasmic domain N4T40_16170 PF02753 Pili assembly chaperone PapD, C-terminal domain N4T40_16170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain N4T40_16175 PF13954 PapC N-terminal domain N4T40_16175 PF00577 Outer membrane usher protein N4T40_16175 PF13953 PapC C-terminal domain N4T40_16190 PF08240 Alcohol dehydrogenase GroES-like domain N4T40_16190 PF00107 Zinc-binding dehydrogenase N4T40_16200 PF00199 Catalase N4T40_16235 PF01244 Membrane dipeptidase (Peptidase family M19) N4T40_16240 PF04055 Radical SAM superfamily N4T40_16240 PF13186 Iron-sulfur cluster-binding domain N4T40_16245 PF05402 Coenzyme PQQ synthesis protein D (PqqD) N4T40_16250 PF03070 TENA/THI-4/PQQC family N4T40_16255 PF12706 Beta-lactamase superfamily domain N4T40_16260 PF08042 PqqA family N4T40_16265 PF02503 Polyphosphate kinase middle domain N4T40_16265 PF13090 Polyphosphate kinase C-terminal domain 2 N4T40_16265 PF17941 Polyphosphate kinase C-terminal domain 1 N4T40_16265 PF13089 Polyphosphate kinase N-terminal domain N4T40_16270 PF00149 Calcineurin-like phosphoesterase N4T40_16280 PF00857 Isochorismatase family N4T40_16280 PF00550 Phosphopantetheine attachment site N4T40_16285 PF00106 short chain dehydrogenase N4T40_16290 PF00005 ABC transporter N4T40_16290 PF03459 TOBE domain N4T40_16295 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_16305 PF03459 TOBE domain N4T40_16305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_16310 PF00848 Ring hydroxylating alpha subunit (catalytic domain) N4T40_16310 PF00355 Rieske [2Fe-2S] domain N4T40_16315 PF00866 Ring hydroxylating beta subunit N4T40_16320 PF00970 Oxidoreductase FAD-binding domain N4T40_16320 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T40_16320 PF00175 Oxidoreductase NAD-binding domain N4T40_16325 PF14525 AraC-binding-like domain N4T40_16325 PF12833 Helix-turn-helix domain N4T40_16335 PF01613 Flavin reductase like domain N4T40_16350 PF01738 Dienelactone hydrolase family N4T40_16355 PF07690 Major Facilitator Superfamily N4T40_16360 PF12833 Helix-turn-helix domain N4T40_16360 PF06719 AraC-type transcriptional regulator N-terminus N4T40_16380 PF13737 Transposase DDE domain N4T40_16385 PF00440 Bacterial regulatory proteins, tetR family N4T40_16400 PF13936 Helix-turn-helix domain N4T40_16400 PF00665 Integrase core domain N4T40_16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_16410 PF03466 LysR substrate binding domain N4T40_16415 PF01144 Coenzyme A transferase N4T40_16420 PF01144 Coenzyme A transferase N4T40_16425 PF02667 Short chain fatty acid transporter N4T40_16430 PF02803 Thiolase, C-terminal domain N4T40_16430 PF00108 Thiolase, N-terminal domain N4T40_16435 PF03466 LysR substrate binding domain N4T40_16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_16440 PF03466 LysR substrate binding domain N4T40_16455 PF10415 Fumarase C C-terminus N4T40_16455 PF00206 Lyase N4T40_16460 PF07715 TonB-dependent Receptor Plug Domain N4T40_16460 PF00593 TonB dependent receptor N4T40_16465 PF00083 Sugar (and other) transporter N4T40_16480 PF00149 Calcineurin-like phosphoesterase N4T40_16500 PF00899 ThiF family N4T40_16500 PF14461 Prokaryotic E2 family B N4T40_16525 PF09278 MerR, DNA binding N4T40_16525 PF00376 MerR family regulatory protein N4T40_16535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T40_16540 PF00873 AcrB/AcrD/AcrF family N4T40_16545 PF02321 Outer membrane efflux protein N4T40_16550 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N4T40_16550 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N4T40_16560 PF00809 Pterin binding enzyme N4T40_16565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T40_16565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T40_16565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T40_16565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T40_16580 PF00239 Resolvase, N terminal domain N4T40_16580 PF02796 Helix-turn-helix domain of resolvase N4T40_16590 PF03358 NADPH-dependent FMN reductase N4T40_16600 PF01758 Sodium Bile acid symporter family N4T40_16660 PF03358 NADPH-dependent FMN reductase N4T40_16665 PF00175 Oxidoreductase NAD-binding domain N4T40_16665 PF00970 Oxidoreductase FAD-binding domain N4T40_16700 PF00665 Integrase core domain N4T40_16715 PF00005 ABC transporter N4T40_16720 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_16725 PF04069 Substrate binding domain of ABC-type glycine betaine transport system N4T40_16740 PF00392 Bacterial regulatory proteins, gntR family N4T40_16740 PF07702 UTRA domain N4T40_16750 PF02525 Flavodoxin-like fold N4T40_16755 PF01638 HxlR-like helix-turn-helix N4T40_16760 PF06445 GyrI-like small molecule binding domain N4T40_16760 PF12833 Helix-turn-helix domain N4T40_16775 PF01925 Sulfite exporter TauE/SafE N4T40_16790 PF04273 Putative phosphatase (DUF442) N4T40_16790 PF00753 Metallo-beta-lactamase superfamily N4T40_16795 PF00072 Response regulator receiver domain N4T40_16795 PF02954 Bacterial regulatory protein, Fis family N4T40_16795 PF00158 Sigma-54 interaction domain N4T40_16800 PF01062 Bestrophin, RFP-TM, chloride channel N4T40_16805 PF00107 Zinc-binding dehydrogenase N4T40_16805 PF08240 Alcohol dehydrogenase GroES-like domain N4T40_16810 PF00106 short chain dehydrogenase N4T40_16820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N4T40_16820 PF00364 Biotin-requiring enzyme N4T40_16820 PF02817 e3 binding domain N4T40_16825 PF02779 Transketolase, pyrimidine binding domain N4T40_16825 PF02780 Transketolase, C-terminal domain N4T40_16830 PF00676 Dehydrogenase E1 component N4T40_16835 PF04055 Radical SAM superfamily N4T40_16850 PF08448 PAS fold N4T40_16850 PF00990 Diguanylate cyclase, GGDEF domain N4T40_16855 PF01264 Chorismate synthase N4T40_16860 PF05175 Methyltransferase small domain N4T40_16865 PF00291 Pyridoxal-phosphate dependent enzyme N4T40_16875 PF01434 Peptidase family M41 N4T40_16875 PF00004 ATPase family associated with various cellular activities (AAA) N4T40_16875 PF17862 AAA+ lid domain N4T40_16885 PF05166 YcgL domain N4T40_16905 PF00570 HRDC domain N4T40_16905 PF01612 3'-5' exonuclease N4T40_16910 PF13662 Toprim domain N4T40_16910 PF02132 RecR protein N4T40_16915 PF02575 YbaB/EbfC DNA-binding family N4T40_16925 PF01053 Cys/Met metabolism PLP-dependent enzyme N4T40_16930 PF00561 alpha/beta hydrolase fold N4T40_16935 PF08241 Methyltransferase domain N4T40_16970 PF01230 HIT domain N4T40_17010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T40_17020 PF02684 Lipid-A-disaccharide synthetase N4T40_17025 PF07715 TonB-dependent Receptor Plug Domain N4T40_17025 PF00593 TonB dependent receptor N4T40_17045 PF01925 Sulfite exporter TauE/SafE N4T40_17050 PF00793 DAHP synthetase I family N4T40_17055 PF02654 Cobalamin-5-phosphate synthase N4T40_17065 PF00300 Histidine phosphatase superfamily (branch 1) N4T40_17075 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase N4T40_17090 PF13419 Haloacid dehalogenase-like hydrolase N4T40_17115 PF07715 TonB-dependent Receptor Plug Domain N4T40_17115 PF00593 TonB dependent receptor N4T40_17120 PF03737 Aldolase/RraA N4T40_17130 PF06276 Ferric iron reductase FhuF-like transporter N4T40_17130 PF04183 IucA / IucC family N4T40_17135 PF06276 Ferric iron reductase FhuF-like transporter N4T40_17135 PF04183 IucA / IucC family N4T40_17140 PF07690 Major Facilitator Superfamily N4T40_17145 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) N4T40_17150 PF06276 Ferric iron reductase FhuF-like transporter N4T40_17150 PF04183 IucA / IucC family N4T40_17155 PF04073 Aminoacyl-tRNA editing domain N4T40_17165 PF03109 ABC1 family N4T40_17170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_17170 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_17170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_17175 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_17175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_17175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_17180 PF00487 Fatty acid desaturase N4T40_17185 PF12852 Cupin N4T40_17185 PF12833 Helix-turn-helix domain N4T40_17190 PF00639 PPIC-type PPIASE domain N4T40_17190 PF09312 SurA N-terminal domain N4T40_17195 PF00216 Bacterial DNA-binding protein N4T40_17210 PF02082 Transcriptional regulator N4T40_17215 PF00266 Aminotransferase class-V N4T40_17220 PF01592 NifU-like N terminal domain N4T40_17225 PF01521 Iron-sulphur cluster biosynthesis N4T40_17230 PF00226 DnaJ domain N4T40_17230 PF07743 HSCB C-terminal oligomerisation domain N4T40_17235 PF00012 Hsp70 protein N4T40_17240 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T40_17245 PF00211 Adenylate and Guanylate cyclase catalytic domain N4T40_17255 PF03461 TRCF domain N4T40_17255 PF17757 UvrB interaction domain N4T40_17255 PF02559 CarD-like/TRCF domain N4T40_17255 PF00271 Helicase conserved C-terminal domain N4T40_17255 PF00270 DEAD/DEAH box helicase N4T40_17275 PF03737 Aldolase/RraA N4T40_17280 PF13460 NAD(P)H-binding N4T40_17285 PF01649 Ribosomal protein S20 N4T40_17295 PF00459 Inositol monophosphatase family N4T40_17310 PF00005 ABC transporter N4T40_17310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4T40_17315 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_17320 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_17325 PF01432 Peptidase family M3 N4T40_17345 PF00593 TonB dependent receptor N4T40_17345 PF07715 TonB-dependent Receptor Plug Domain N4T40_17355 PF01618 MotA/TolQ/ExbB proton channel family N4T40_17360 PF02472 Biopolymer transport protein ExbD/TolR N4T40_17365 PF02472 Biopolymer transport protein ExbD/TolR N4T40_17375 PF01274 Malate synthase N4T40_17380 PF03969 AFG1-like ATPase N4T40_17390 PF00743 Flavin-binding monooxygenase-like N4T40_17400 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N4T40_17410 PF00216 Bacterial DNA-binding protein N4T40_17415 PF00575 S1 RNA binding domain N4T40_17420 PF02224 Cytidylate kinase N4T40_17430 PF14437 MafB19-like deaminase N4T40_17440 PF03167 Uracil DNA glycosylase superfamily N4T40_17450 PF03934 Type II secretion system (T2SS), protein K N4T40_17455 PF07963 Prokaryotic N-terminal methylation motif N4T40_17455 PF11612 Type II secretion system (T2SS), protein J N4T40_17460 PF07963 Prokaryotic N-terminal methylation motif N4T40_17460 PF02501 Type II secretion system (T2SS), protein I N4T40_17475 PF01026 TatD related DNase N4T40_17485 PF09115 DNA polymerase III, delta subunit, C terminal N4T40_17490 PF02348 Cytidylyltransferase N4T40_17495 PF02606 Tetraacyldisaccharide-1-P 4'-kinase N4T40_17500 PF00005 ABC transporter N4T40_17500 PF00664 ABC transporter transmembrane region N4T40_17510 PF01618 MotA/TolQ/ExbB proton channel family N4T40_17515 PF17762 HTH domain found in ParB protein N4T40_17515 PF02195 ParB-like nuclease domain N4T40_17520 PF13614 AAA domain N4T40_17525 PF02527 rRNA small subunit methyltransferase G N4T40_17530 PF00483 Nucleotidyl transferase N4T40_17535 PF01636 Phosphotransferase enzyme family N4T40_17540 PF04453 LPS transport system D N4T40_17540 PF03968 OstA-like protein N4T40_17545 PF09312 SurA N-terminal domain N4T40_17545 PF00639 PPIC-type PPIASE domain N4T40_17550 PF01116 Fructose-bisphosphate aldolase class-II N4T40_17560 PF00162 Phosphoglycerate kinase N4T40_17570 PF02545 Maf-like protein N4T40_17575 PF08007 Cupin superfamily protein N4T40_17590 PF00375 Sodium:dicarboxylate symporter family N4T40_17595 PF06912 Protein of unknown function (DUF1275) N4T40_17600 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) N4T40_17605 PF00005 ABC transporter N4T40_17605 PF00664 ABC transporter transmembrane region N4T40_17615 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term N4T40_17615 PF12833 Helix-turn-helix domain N4T40_17620 PF01597 Glycine cleavage H-protein N4T40_17625 PF02146 Sir2 family N4T40_17630 PF00474 Sodium:solute symporter family N4T40_17635 PF01037 Lrp/AsnC ligand binding domain N4T40_17640 PF00171 Aldehyde dehydrogenase family N4T40_17640 PF01619 Proline dehydrogenase N4T40_17640 PF18327 Proline utilization A proline dehydrogenase N-terminal domain N4T40_17640 PF14850 DNA-binding domain of Proline dehydrogenase N4T40_17645 PF04229 GrpB protein N4T40_17650 PF05958 tRNA (Uracil-5-)-methyltransferase N4T40_17660 PF09992 Phosphodiester glycosidase N4T40_17670 PF04264 YceI-like domain N4T40_17680 PF00456 Transketolase, thiamine diphosphate binding domain N4T40_17680 PF02780 Transketolase, C-terminal domain N4T40_17680 PF02779 Transketolase, pyrimidine binding domain N4T40_17685 PF02772 S-adenosylmethionine synthetase, central domain N4T40_17685 PF02773 S-adenosylmethionine synthetase, C-terminal domain N4T40_17685 PF00438 S-adenosylmethionine synthetase, N-terminal domain N4T40_17705 PF00905 Penicillin binding protein transpeptidase domain N4T40_17720 PF02075 Crossover junction endodeoxyribonuclease RuvC N4T40_17725 PF03853 YjeF-related protein N-terminus N4T40_17725 PF01256 Carbohydrate kinase N4T40_17730 PF08331 Domain of unknown function (DUF1730) N4T40_17735 PF04055 Radical SAM superfamily N4T40_17735 PF06968 Biotin and Thiamin Synthesis associated domain N4T40_17750 PF16970 Type-1 fimbrial protein, A N4T40_17755 PF02753 Pili assembly chaperone PapD, C-terminal domain N4T40_17755 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain N4T40_17760 PF13953 PapC C-terminal domain N4T40_17760 PF13954 PapC N-terminal domain N4T40_17760 PF00577 Outer membrane usher protein N4T40_17780 PF00892 EamA-like transporter family N4T40_17790 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin N4T40_17820 PF00440 Bacterial regulatory proteins, tetR family N4T40_17830 PF01709 Transcriptional regulator N4T40_17835 PF01037 Lrp/AsnC ligand binding domain N4T40_17845 PF00005 ABC transporter N4T40_17850 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_17855 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_17870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_17870 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T40_17880 PF00296 Luciferase-like monooxygenase N4T40_17885 PF03180 NLPA lipoprotein N4T40_17890 PF03180 NLPA lipoprotein N4T40_17895 PF00005 ABC transporter N4T40_17895 PF09383 NIL domain N4T40_17900 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_17905 PF06071 Protein of unknown function (DUF933) N4T40_17905 PF01926 50S ribosome-binding GTPase N4T40_17930 PF03591 AzlC protein N4T40_17935 PF05437 Branched-chain amino acid transport protein (AzlD) N4T40_17945 PF02222 ATP-grasp domain N4T40_17950 PF08335 GlnD PII-uridylyltransferase N4T40_17950 PF01966 HD domain N4T40_17950 PF01909 Nucleotidyltransferase domain N4T40_17955 PF00155 Aminotransferase class I and II N4T40_17965 PF12852 Cupin N4T40_17965 PF12833 Helix-turn-helix domain N4T40_17970 PF00255 Glutathione peroxidase N4T40_17975 PF01641 SelR domain N4T40_17980 PF00155 Aminotransferase class I and II N4T40_17985 PF00375 Sodium:dicarboxylate symporter family N4T40_17990 PF17763 Glutaminase/Asparaginase C-terminal domain N4T40_17990 PF00710 Asparaginase, N-terminal N4T40_17995 PF14579 Helix-hairpin-helix motif N4T40_17995 PF02811 PHP domain N4T40_17995 PF01336 OB-fold nucleic acid binding domain N4T40_17995 PF07733 Bacterial DNA polymerase III alpha NTPase domain N4T40_17995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N4T40_18000 PF00588 SpoU rRNA Methylase family N4T40_18005 PF00132 Bacterial transferase hexapeptide (six repeats) N4T40_18020 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_18020 PF13192 Thioredoxin domain N4T40_18035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_18035 PF03466 LysR substrate binding domain N4T40_18040 PF01758 Sodium Bile acid symporter family N4T40_18045 PF01022 Bacterial regulatory protein, arsR family N4T40_18050 PF03960 ArsC family N4T40_18070 PF03466 LysR substrate binding domain N4T40_18070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_18080 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin N4T40_18085 PF01177 Asp/Glu/Hydantoin racemase N4T40_18090 PF02668 Taurine catabolism dioxygenase TauD, TfdA family N4T40_18095 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_18105 PF04069 Substrate binding domain of ABC-type glycine betaine transport system N4T40_18120 PF00083 Sugar (and other) transporter N4T40_18125 PF00296 Luciferase-like monooxygenase N4T40_18140 PF01654 Cytochrome bd terminal oxidase subunit I N4T40_18145 PF02322 Cytochrome bd terminal oxidase subunit II N4T40_18160 PF03466 LysR substrate binding domain N4T40_18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_18175 PF00698 Acyl transferase domain N4T40_18180 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG N4T40_18190 PF01039 Carboxyl transferase domain N4T40_18195 PF06857 Malonate decarboxylase delta subunit (MdcD) N4T40_18200 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase N4T40_18205 PF16957 Malonate decarboxylase, alpha subunit, transporter N4T40_18210 PF03466 LysR substrate binding domain N4T40_18210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_18220 PF07690 Major Facilitator Superfamily N4T40_18235 PF00155 Aminotransferase class I and II N4T40_18235 PF00392 Bacterial regulatory proteins, gntR family N4T40_18240 PF04172 LrgB-like family N4T40_18245 PF03788 LrgA family N4T40_18250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_18250 PF03466 LysR substrate binding domain N4T40_18255 PF14834 Glutathione S-transferase, C-terminal domain N4T40_18255 PF02798 Glutathione S-transferase, N-terminal domain N4T40_18260 PF02798 Glutathione S-transferase, N-terminal domain N4T40_18265 PF03466 LysR substrate binding domain N4T40_18265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_18275 PF00581 Rhodanese-like domain N4T40_18280 PF00132 Bacterial transferase hexapeptide (six repeats) N4T40_18290 PF00266 Aminotransferase class-V N4T40_18300 PF01810 LysE type translocator N4T40_18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_18305 PF03466 LysR substrate binding domain N4T40_18320 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T40_18325 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T40_18330 PF00005 ABC transporter N4T40_18335 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_18340 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_18355 PF00072 Response regulator receiver domain N4T40_18360 PF00512 His Kinase A (phospho-acceptor) domain N4T40_18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_18360 PF00072 Response regulator receiver domain N4T40_18360 PF09308 LuxQ, periplasmic N4T40_18370 PF01037 Lrp/AsnC ligand binding domain N4T40_18370 PF13404 AsnC-type helix-turn-helix domain N4T40_18380 PF00717 Peptidase S24-like N4T40_18405 PF18011 C-terminal domain found in long catalases N4T40_18405 PF06628 Catalase-related immune-responsive N4T40_18405 PF00199 Catalase N4T40_18415 PF18146 Damage-inducible protein CinA KH domain N4T40_18415 PF02464 Competence-damaged protein N4T40_18415 PF00994 Probable molybdopterin binding domain N4T40_18450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_18450 PF03466 LysR substrate binding domain N4T40_18470 PF00501 AMP-binding enzyme N4T40_18470 PF13193 AMP-binding enzyme C-terminal domain N4T40_18475 PF00440 Bacterial regulatory proteins, tetR family N4T40_18480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_18480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_18480 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_18485 PF01039 Carboxyl transferase domain N4T40_18490 PF00378 Enoyl-CoA hydratase/isomerase N4T40_18495 PF18140 Propionyl-coenzyme A carboxylase BT domain N4T40_18495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T40_18495 PF00289 Biotin carboxylase, N-terminal domain N4T40_18495 PF00364 Biotin-requiring enzyme N4T40_18495 PF02785 Biotin carboxylase C-terminal domain N4T40_18500 PF00682 HMGL-like N4T40_18505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_18505 PF03466 LysR substrate binding domain N4T40_18520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_18520 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_18520 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T40_18520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_18530 PF07690 Major Facilitator Superfamily N4T40_18540 PF01144 Coenzyme A transferase N4T40_18545 PF01144 Coenzyme A transferase N4T40_18550 PF07690 Major Facilitator Superfamily N4T40_18555 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_18555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_18555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_18560 PF00378 Enoyl-CoA hydratase/isomerase N4T40_18570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T40_18570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T40_18570 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain N4T40_18575 PF00108 Thiolase, N-terminal domain N4T40_18575 PF02803 Thiolase, C-terminal domain N4T40_18580 PF09339 IclR helix-turn-helix domain N4T40_18585 PF13737 Transposase DDE domain N4T40_18595 PF01810 LysE type translocator N4T40_18600 PF16861 Carbamoyltransferase C-terminus N4T40_18600 PF02543 Carbamoyltransferase N-terminus N4T40_18610 PF03060 Nitronate monooxygenase N4T40_18615 PF00378 Enoyl-CoA hydratase/isomerase N4T40_18620 PF09339 IclR helix-turn-helix domain N4T40_18625 PF02515 CoA-transferase family III N4T40_18630 PF02770 Acyl-CoA dehydrogenase, middle domain N4T40_18630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T40_18630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T40_18635 PF07690 Major Facilitator Superfamily N4T40_18640 PF13419 Haloacid dehalogenase-like hydrolase N4T40_18645 PF00266 Aminotransferase class-V N4T40_18650 PF01266 FAD dependent oxidoreductase N4T40_18655 PF00528 Binding-protein-dependent transport system inner membrane component N4T40_18660 PF00005 ABC transporter N4T40_18660 PF08402 TOBE domain N4T40_18670 PF00392 Bacterial regulatory proteins, gntR family N4T40_18670 PF07702 UTRA domain N4T40_18675 PF01494 FAD binding domain N4T40_18680 PF09339 IclR helix-turn-helix domain N4T40_18680 PF01614 Bacterial transcriptional regulator N4T40_18685 PF02525 Flavodoxin-like fold N4T40_18690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_18690 PF03466 LysR substrate binding domain N4T40_18695 PF02627 Carboxymuconolactone decarboxylase family N4T40_18700 PF00171 Aldehyde dehydrogenase family N4T40_18715 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin N4T40_18725 PF00171 Aldehyde dehydrogenase family N4T40_18730 PF00296 Luciferase-like monooxygenase N4T40_18735 PF01613 Flavin reductase like domain N4T40_18740 PF12697 Alpha/beta hydrolase family N4T40_18760 PF01292 Prokaryotic cytochrome b561 N4T40_18765 PF00199 Catalase N4T40_18790 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) N4T40_18800 PF03061 Thioesterase superfamily N4T40_18805 PF00132 Bacterial transferase hexapeptide (six repeats) N4T40_18810 PF08223 PaaX-like protein C-terminal domain N4T40_18810 PF07848 PaaX-like protein N4T40_18815 PF00501 AMP-binding enzyme N4T40_18815 PF14535 AMP-binding enzyme C-terminal domain N4T40_18820 PF00108 Thiolase, N-terminal domain N4T40_18820 PF02803 Thiolase, C-terminal domain N4T40_18825 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain N4T40_18825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T40_18825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T40_18830 PF00378 Enoyl-CoA hydratase/isomerase N4T40_18835 PF00378 Enoyl-CoA hydratase/isomerase N4T40_18840 PF00970 Oxidoreductase FAD-binding domain N4T40_18840 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T40_18840 PF00175 Oxidoreductase NAD-binding domain N4T40_18845 PF01883 Iron-sulfur cluster assembly protein N4T40_18850 PF05138 Phenylacetic acid catabolic protein N4T40_18855 PF06243 Phenylacetic acid degradation B N4T40_18860 PF05138 Phenylacetic acid catabolic protein N4T40_18865 PF00171 Aldehyde dehydrogenase family N4T40_18865 PF01575 MaoC like domain N4T40_18870 PF03313 Serine dehydratase alpha chain N4T40_18870 PF03315 Serine dehydratase beta chain N4T40_18875 PF13520 Amino acid permease N4T40_18880 PF00171 Aldehyde dehydrogenase family N4T40_18885 PF00083 Sugar (and other) transporter N4T40_18895 PF04324 BFD-like [2Fe-2S] binding domain N4T40_18895 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_18905 PF01266 FAD dependent oxidoreductase N4T40_18910 PF05544 Proline racemase N4T40_18915 PF00392 Bacterial regulatory proteins, gntR family N4T40_18925 PF00701 Dihydrodipicolinate synthetase family N4T40_18935 PF00376 MerR family regulatory protein N4T40_18935 PF09278 MerR, DNA binding N4T40_18945 PF02677 Epoxyqueuosine reductase QueH N4T40_18960 PF07690 Major Facilitator Superfamily N4T40_18965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N4T40_18975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_18975 PF03466 LysR substrate binding domain N4T40_18995 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE N4T40_19000 PF06812 ImpA, N-terminal, type VI secretion system N4T40_19005 PF10431 C-terminal, D2-small domain, of ClpB protein N4T40_19005 PF00004 ATPase family associated with various cellular activities (AAA) N4T40_19005 PF07724 AAA domain (Cdc48 subfamily) N4T40_19005 PF17871 AAA lid domain N4T40_19020 PF01389 OmpA-like transmembrane domain N4T40_19020 PF00691 OmpA family N4T40_19030 PF06761 Intracellular multiplication and human macrophage-killing N4T40_19030 PF06744 Type VI secretion protein IcmF C-terminal N4T40_19030 PF14331 ImcF-related N-terminal domain N4T40_19045 PF05947 Type VI secretion system, TssF N4T40_19060 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath N4T40_19085 PF00005 ABC transporter N4T40_19090 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T40_19095 PF01425 Amidase N4T40_19100 PF01402 Ribbon-helix-helix protein, copG family N4T40_19100 PF08753 NikR C terminal nickel binding domain N4T40_19110 PF01638 HxlR-like helix-turn-helix N4T40_19115 PF02525 Flavodoxin-like fold N4T40_19120 PF00289 Biotin carboxylase, N-terminal domain N4T40_19120 PF02785 Biotin carboxylase C-terminal domain N4T40_19120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T40_19135 PF00107 Zinc-binding dehydrogenase N4T40_19135 PF13823 Alcohol dehydrogenase GroES-associated N4T40_19135 PF08240 Alcohol dehydrogenase GroES-like domain N4T40_19160 PF00654 Voltage gated chloride channel N4T40_19165 PF02785 Biotin carboxylase C-terminal domain N4T40_19165 PF00289 Biotin carboxylase, N-terminal domain N4T40_19165 PF00364 Biotin-requiring enzyme N4T40_19165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T40_19175 PF07286 Protein of unknown function (DUF1445) N4T40_19180 PF03746 LamB/YcsF family N4T40_19185 PF01566 Natural resistance-associated macrophage protein N4T40_19190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_19190 PF03466 LysR substrate binding domain N4T40_19200 PF13737 Transposase DDE domain N4T40_19220 PF13737 Transposase DDE domain N4T40_19225 PF13936 Helix-turn-helix domain N4T40_19225 PF00665 Integrase core domain N4T40_19235 PF13737 Transposase DDE domain N4T40_19240 PF03527 RHS protein N4T40_19240 PF05593 RHS Repeat N4T40_19245 PF13296 Putative type VI secretion system Rhs element Vgr N4T40_19245 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) N4T40_19245 PF04717 Type VI secretion system, phage-baseplate injector N4T40_19270 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T40_19270 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T40_19295 PF02525 Flavodoxin-like fold N4T40_19320 PF07690 Major Facilitator Superfamily N4T40_19335 PF03279 Bacterial lipid A biosynthesis acyltransferase N4T40_19340 PF00990 Diguanylate cyclase, GGDEF domain N4T40_19340 PF00563 EAL domain N4T40_19340 PF03707 Bacterial signalling protein N terminal repeat N4T40_19345 PF00892 EamA-like transporter family N4T40_19350 PF01037 Lrp/AsnC ligand binding domain N4T40_19355 PF01624 MutS domain I N4T40_19355 PF05188 MutS domain II N4T40_19355 PF05192 MutS domain III N4T40_19355 PF05190 MutS family domain IV N4T40_19355 PF00488 MutS domain V N4T40_19365 PF00037 4Fe-4S binding domain N4T40_19365 PF11953 Domain of unknown function (DUF3470) N4T40_19375 PF01596 O-methyltransferase N4T40_19385 PF00132 Bacterial transferase hexapeptide (six repeats) N4T40_19390 PF01205 Uncharacterized protein family UPF0029 N4T40_19400 PF00664 ABC transporter transmembrane region N4T40_19400 PF03412 Peptidase C39 family N4T40_19400 PF00005 ABC transporter N4T40_19405 PF02321 Outer membrane efflux protein N4T40_19410 PF00005 ABC transporter N4T40_19410 PF12399 Branched-chain amino acid ATP-binding cassette transporter N4T40_19415 PF03968 OstA-like protein N4T40_19430 PF00571 CBS domain N4T40_19430 PF01380 SIS domain N4T40_19435 PF09190 DALR domain N4T40_19435 PF01406 tRNA synthetases class I (C) catalytic domain N4T40_19445 PF00589 Phage integrase family N4T40_19650 PF09588 YqaJ-like viral recombinase domain N4T40_19660 PF00580 UvrD/REP helicase N-terminal domain N4T40_19660 PF13361 UvrD-like helicase C-terminal domain N4T40_19665 PF02954 Bacterial regulatory protein, Fis family N4T40_19695 PF13737 Transposase DDE domain N4T40_19715 PF01638 HxlR-like helix-turn-helix N4T40_19720 PF07690 Major Facilitator Superfamily N4T40_19745 PF03807 NADP oxidoreductase coenzyme F420-dependent N4T40_19745 PF14748 Pyrroline-5-carboxylate reductase dimerisation N4T40_19760 PF00313 'Cold-shock' DNA-binding domain N4T40_19765 PF01810 LysE type translocator N4T40_19795 PF13742 OB-fold nucleic acid binding domain N4T40_19795 PF02601 Exonuclease VII, large subunit N4T40_19830 PF09278 MerR, DNA binding N4T40_19830 PF00376 MerR family regulatory protein N4T40_19835 PF00403 Heavy-metal-associated domain N4T40_19855 PF06099 Phenol hydroxylase subunit N4T40_19860 PF02332 Methane/Phenol/Toluene Hydroxylase N4T40_19865 PF02406 MmoB/DmpM family N4T40_19870 PF04945 YHS domain N4T40_19870 PF02332 Methane/Phenol/Toluene Hydroxylase N4T40_19880 PF00175 Oxidoreductase NAD-binding domain N4T40_19880 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T40_19880 PF00970 Oxidoreductase FAD-binding domain N4T40_19890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T40_19890 PF03466 LysR substrate binding domain N4T40_19900 PF00355 Rieske [2Fe-2S] domain N4T40_19900 PF00848 Ring hydroxylating alpha subunit (catalytic domain) N4T40_19910 PF00970 Oxidoreductase FAD-binding domain N4T40_19910 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T40_19910 PF00175 Oxidoreductase NAD-binding domain N4T40_19915 PF00106 short chain dehydrogenase N4T40_19920 PF03594 Benzoate membrane transport protein N4T40_19925 PF07690 Major Facilitator Superfamily N4T40_19935 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N4T40_19935 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N4T40_19940 PF11898 Domain of unknown function (DUF3418) N4T40_19940 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N4T40_19940 PF00271 Helicase conserved C-terminal domain N4T40_19940 PF04408 Helicase associated domain (HA2) N4T40_19940 PF00270 DEAD/DEAH box helicase N4T40_19945 PF10417 C-terminal domain of 1-Cys peroxiredoxin N4T40_19945 PF00578 AhpC/TSA family N4T40_19965 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_19965 PF13192 Thioredoxin domain N4T40_19975 PF00043 Glutathione S-transferase, C-terminal domain N4T40_19975 PF02798 Glutathione S-transferase, N-terminal domain N4T40_19985 PF02390 Putative methyltransferase N4T40_19990 PF13417 Glutathione S-transferase, N-terminal domain N4T40_19990 PF00043 Glutathione S-transferase, C-terminal domain N4T40_20000 PF00691 OmpA family N4T40_20000 PF13488 Glycine zipper N4T40_20005 PF01979 Amidohydrolase family N4T40_20010 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N4T40_20010 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N4T40_20020 PF10672 S-adenosylmethionine-dependent methyltransferase N4T40_20020 PF02926 THUMP domain N4T40_20020 PF01170 Putative RNA methylase family UPF0020 N4T40_20035 PF02861 Clp amino terminal domain, pathogenicity island component N4T40_20035 PF17871 AAA lid domain N4T40_20035 PF07724 AAA domain (Cdc48 subfamily) N4T40_20035 PF10431 C-terminal, D2-small domain, of ClpB protein N4T40_20035 PF00004 ATPase family associated with various cellular activities (AAA) N4T40_20050 PF02566 OsmC-like protein N4T40_20060 PF13545 Crp-like helix-turn-helix domain N4T40_20060 PF00027 Cyclic nucleotide-binding domain N4T40_20065 PF00248 Aldo/keto reductase family N4T40_20080 PF00709 Adenylosuccinate synthetase N4T40_20085 PF13393 Histidyl-tRNA synthetase N4T40_20090 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N4T40_20090 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N4T40_20095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N4T40_20095 PF02272 DHHA1 domain N4T40_20095 PF01411 tRNA synthetases class II (A) N4T40_20100 PF13356 Arm DNA-binding domain N4T40_20100 PF00589 Phage integrase family N4T40_20115 PF00717 Peptidase S24-like N4T40_20120 PF00817 impB/mucB/samB family N4T40_20120 PF11799 impB/mucB/samB family C-terminal domain N4T40_20120 PF13438 Domain of unknown function (DUF4113) N4T40_20170 PF01476 LysM domain N4T40_20170 PF01551 Peptidase family M23 N4T40_20170 PF08525 Opacity-associated protein A N-terminal motif N4T40_20195 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system N4T40_20220 PF00809 Pterin binding enzyme N4T40_20240 PF02796 Helix-turn-helix domain of resolvase N4T40_20240 PF00239 Resolvase, N terminal domain N4T40_20245 PF01494 FAD binding domain N4T40_20250 PF13495 Phage integrase, N-terminal SAM-like domain N4T40_20250 PF00589 Phage integrase family N4T40_20345 PF00437 Type II/IV secretion system protein N4T40_20360 PF17762 HTH domain found in ParB protein N4T40_20360 PF02195 ParB-like nuclease domain N4T40_20365 PF13614 AAA domain N4T40_20395 PF13361 UvrD-like helicase C-terminal domain N4T40_20395 PF00580 UvrD/REP helicase N-terminal domain N4T40_20450 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T40_20460 PF13276 HTH-like domain N4T40_20460 PF13333 Integrase core domain N4T40_20460 PF00665 Integrase core domain N4T40_20475 PF09278 MerR, DNA binding N4T40_20475 PF00376 MerR family regulatory protein N4T40_20480 PF00403 Heavy-metal-associated domain N4T40_20485 PF01022 Bacterial regulatory protein, arsR family N4T40_20495 PF01545 Cation efflux family N4T40_20500 PF00529 HlyD membrane-fusion protein of T1SS N4T40_20500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T40_20505 PF00873 AcrB/AcrD/AcrF family N4T40_20510 PF02321 Outer membrane efflux protein N4T40_20525 PF01545 Cation efflux family N4T40_20525 PF16916 Dimerisation domain of Zinc Transporter N4T40_20695 PF01435 Peptidase family M48 N4T40_20770 PF03050 Transposase IS66 family N4T40_20770 PF13817 IS66 C-terminal element N4T40_20770 PF13007 Transposase C of IS166 homeodomain N4T40_20770 PF13005 zinc-finger binding domain of transposase IS66 N4T40_20780 PF00962 Adenosine/AMP deaminase N4T40_20815 PF03050 Transposase IS66 family N4T40_20815 PF13007 Transposase C of IS166 homeodomain N4T40_20815 PF13817 IS66 C-terminal element N4T40_20815 PF13005 zinc-finger binding domain of transposase IS66 N4T40_20825 PF13610 DDE domain N4T40_20830 PF00239 Resolvase, N terminal domain N4T40_20830 PF02796 Helix-turn-helix domain of resolvase N4T40_20845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T40_20845 PF00529 HlyD membrane-fusion protein of T1SS N4T40_20850 PF00873 AcrB/AcrD/AcrF family N4T40_20855 PF07690 Major Facilitator Superfamily N4T40_20860 PF00672 HAMP domain N4T40_20860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T40_20860 PF00512 His Kinase A (phospho-acceptor) domain N4T40_20860 PF00989 PAS fold N4T40_20860 PF18698 Histidine kinase sensor domain N4T40_20865 PF00072 Response regulator receiver domain N4T40_20865 PF00486 Transcriptional regulatory protein, C terminal N4T40_20875 PF00905 Penicillin binding protein transpeptidase domain N4T40_20895 PF01520 N-acetylmuramoyl-L-alanine amidase N4T40_20895 PF08239 Bacterial SH3 domain N4T40_20920 PF02899 Phage integrase, N-terminal SAM-like domain N4T40_20920 PF00589 Phage integrase family N4T40_20945 PF13007 Transposase C of IS166 homeodomain N4T40_20945 PF03050 Transposase IS66 family N4T40_20945 PF13005 zinc-finger binding domain of transposase IS66 N4T40_20945 PF13817 IS66 C-terminal element N4T40_21025 PF01131 DNA topoisomerase N4T40_21025 PF01751 Toprim domain N4T40_21025 PF01396 Topoisomerase DNA binding C4 zinc finger N4T40_21045 PF08240 Alcohol dehydrogenase GroES-like domain N4T40_21045 PF00107 Zinc-binding dehydrogenase N4T40_21105 PF01555 DNA methylase N4T40_21115 PF00565 Staphylococcal nuclease homologue N4T40_21170 PF00271 Helicase conserved C-terminal domain N4T40_21170 PF12137 RNA polymerase recycling family C-terminal N4T40_21170 PF00176 SNF2 family N-terminal domain N4T40_21170 PF18339 RapA N-terminal Tudor like domain 1 N4T40_21170 PF18337 RapA N-terminal Tudor like domain N4T40_21265 PF17841 BID domain of Bartonella effector protein (Bep) N4T40_21265 PF02661 Fic/DOC family N4T40_21285 PF01636 Phosphotransferase enzyme family N4T40_21290 PF00665 Integrase core domain N4T40_21290 PF13936 Helix-turn-helix domain N4T40_21295 PF00753 Metallo-beta-lactamase superfamily N4T40_21335 PF00313 'Cold-shock' DNA-binding domain N4T40_21370 PF13936 Helix-turn-helix domain N4T40_21370 PF00665 Integrase core domain N4T40_21415 PF00809 Pterin binding enzyme N4T40_21420 PF00893 Small Multidrug Resistance protein N4T40_21435 PF00589 Phage integrase family N4T40_21435 PF13495 Phage integrase, N-terminal SAM-like domain N4T40_21445 PF11798 IMS family HHH motif N4T40_21445 PF11799 impB/mucB/samB family C-terminal domain N4T40_21445 PF00817 impB/mucB/samB family N4T40_21445 PF13438 Domain of unknown function (DUF4113) N4T40_21450 PF00717 Peptidase S24-like N4T40_21585 PF00239 Resolvase, N terminal domain N4T40_21585 PF02796 Helix-turn-helix domain of resolvase N4T40_21590 PF01636 Phosphotransferase enzyme family N4T40_21595 PF00005 ABC transporter N4T40_21595 PF12848 ABC transporter N4T40_21615 PF01381 Helix-turn-helix N4T40_21620 PF05973 Phage derived protein Gp49-like (DUF891) N4T40_21625 PF13936 Helix-turn-helix domain N4T40_21625 PF00665 Integrase core domain N4T40_21645 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase N4T40_21650 PF01636 Phosphotransferase enzyme family N4T40_21655 PF02796 Helix-turn-helix domain of resolvase N4T40_21655 PF00239 Resolvase, N terminal domain N4T40_21665 PF01526 Tn3 transposase DDE domain N4T40_21665 PF13700 Domain of unknown function (DUF4158) N4T40_21680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T40_21680 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T40_21690 PF07690 Major Facilitator Superfamily N4T40_21695 PF01494 FAD binding domain N4T40_21700 PF13426 PAS domain N4T40_21700 PF02954 Bacterial regulatory protein, Fis family N4T40_21700 PF00158 Sigma-54 interaction domain N4T40_21705 PF00171 Aldehyde dehydrogenase family N4T40_21710 PF08240 Alcohol dehydrogenase GroES-like domain N4T40_21710 PF00107 Zinc-binding dehydrogenase N4T40_21715 PF07859 alpha/beta hydrolase fold N4T40_21740 PF13613 Helix-turn-helix of DDE superfamily endonuclease N4T40_21740 PF13359 DDE superfamily endonuclease N4T40_21850 PF08346 AntA/AntB antirepressor N4T40_21850 PF10548 P22AR C-terminal domain N4T40_22070 PF00772 DnaB-like helicase N terminal domain N4T40_22070 PF03796 DnaB-like helicase C terminal domain N4T40_22100 PF01381 Helix-turn-helix N4T40_22130 PF06630 Enterobacterial exodeoxyribonuclease VIII N4T40_22130 PF12684 PDDEXK-like domain of unknown function (DUF3799) N4T40_22165 PF13356 Arm DNA-binding domain N4T40_22165 PF00589 Phage integrase family