locus-tag class description N4T41_00010 PF13936 Helix-turn-helix domain N4T41_00010 PF00665 Integrase core domain N4T41_00015 PF00753 Metallo-beta-lactamase superfamily N4T41_00055 PF00313 'Cold-shock' DNA-binding domain N4T41_00090 PF13936 Helix-turn-helix domain N4T41_00090 PF00665 Integrase core domain N4T41_00135 PF00809 Pterin binding enzyme N4T41_00140 PF00893 Small Multidrug Resistance protein N4T41_00155 PF13495 Phage integrase, N-terminal SAM-like domain N4T41_00155 PF00589 Phage integrase family N4T41_00165 PF13438 Domain of unknown function (DUF4113) N4T41_00165 PF00817 impB/mucB/samB family N4T41_00165 PF11799 impB/mucB/samB family C-terminal domain N4T41_00165 PF11798 IMS family HHH motif N4T41_00170 PF00717 Peptidase S24-like N4T41_00305 PF00239 Resolvase, N terminal domain N4T41_00305 PF02796 Helix-turn-helix domain of resolvase N4T41_00310 PF01636 Phosphotransferase enzyme family N4T41_00315 PF00005 ABC transporter N4T41_00315 PF12848 ABC transporter N4T41_00335 PF01381 Helix-turn-helix N4T41_00340 PF05973 Phage derived protein Gp49-like (DUF891) N4T41_00345 PF00665 Integrase core domain N4T41_00345 PF13936 Helix-turn-helix domain N4T41_00365 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase N4T41_00370 PF01636 Phosphotransferase enzyme family N4T41_00375 PF02796 Helix-turn-helix domain of resolvase N4T41_00375 PF00239 Resolvase, N terminal domain N4T41_00385 PF13700 Domain of unknown function (DUF4158) N4T41_00385 PF01526 Tn3 transposase DDE domain N4T41_00400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T41_00400 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_00410 PF07690 Major Facilitator Superfamily N4T41_00415 PF01494 FAD binding domain N4T41_00420 PF00158 Sigma-54 interaction domain N4T41_00420 PF13426 PAS domain N4T41_00420 PF02954 Bacterial regulatory protein, Fis family N4T41_00425 PF00171 Aldehyde dehydrogenase family N4T41_00430 PF08240 Alcohol dehydrogenase GroES-like domain N4T41_00430 PF00107 Zinc-binding dehydrogenase N4T41_00435 PF07859 alpha/beta hydrolase fold N4T41_00460 PF13613 Helix-turn-helix of DDE superfamily endonuclease N4T41_00460 PF13359 DDE superfamily endonuclease N4T41_00510 PF00809 Pterin binding enzyme N4T41_00530 PF02796 Helix-turn-helix domain of resolvase N4T41_00530 PF00239 Resolvase, N terminal domain N4T41_00535 PF01494 FAD binding domain N4T41_00540 PF13495 Phage integrase, N-terminal SAM-like domain N4T41_00540 PF00589 Phage integrase family N4T41_00635 PF00437 Type II/IV secretion system protein N4T41_00655 PF02195 ParB-like nuclease domain N4T41_00655 PF17762 HTH domain found in ParB protein N4T41_00660 PF13614 AAA domain N4T41_00690 PF00580 UvrD/REP helicase N-terminal domain N4T41_00690 PF13361 UvrD-like helicase C-terminal domain N4T41_00745 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T41_00770 PF00376 MerR family regulatory protein N4T41_00770 PF09278 MerR, DNA binding N4T41_00775 PF00403 Heavy-metal-associated domain N4T41_00780 PF01022 Bacterial regulatory protein, arsR family N4T41_00790 PF01545 Cation efflux family N4T41_00795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T41_00795 PF00529 HlyD membrane-fusion protein of T1SS N4T41_00800 PF00873 AcrB/AcrD/AcrF family N4T41_00805 PF02321 Outer membrane efflux protein N4T41_00820 PF16916 Dimerisation domain of Zinc Transporter N4T41_00820 PF01545 Cation efflux family N4T41_00990 PF01435 Peptidase family M48 N4T41_01065 PF13005 zinc-finger binding domain of transposase IS66 N4T41_01065 PF13817 IS66 C-terminal element N4T41_01065 PF03050 Transposase IS66 family N4T41_01065 PF13007 Transposase C of IS166 homeodomain N4T41_01075 PF00962 Adenosine/AMP deaminase N4T41_01110 PF13005 zinc-finger binding domain of transposase IS66 N4T41_01110 PF13007 Transposase C of IS166 homeodomain N4T41_01110 PF13817 IS66 C-terminal element N4T41_01110 PF03050 Transposase IS66 family N4T41_01120 PF13610 DDE domain N4T41_01125 PF02796 Helix-turn-helix domain of resolvase N4T41_01125 PF00239 Resolvase, N terminal domain N4T41_01140 PF00529 HlyD membrane-fusion protein of T1SS N4T41_01140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T41_01145 PF00873 AcrB/AcrD/AcrF family N4T41_01150 PF07690 Major Facilitator Superfamily N4T41_01155 PF18698 Histidine kinase sensor domain N4T41_01155 PF00989 PAS fold N4T41_01155 PF00672 HAMP domain N4T41_01155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_01155 PF00512 His Kinase A (phospho-acceptor) domain N4T41_01160 PF00072 Response regulator receiver domain N4T41_01160 PF00486 Transcriptional regulatory protein, C terminal N4T41_01170 PF00905 Penicillin binding protein transpeptidase domain N4T41_01190 PF08239 Bacterial SH3 domain N4T41_01190 PF01520 N-acetylmuramoyl-L-alanine amidase N4T41_01215 PF02899 Phage integrase, N-terminal SAM-like domain N4T41_01215 PF00589 Phage integrase family N4T41_01320 PF01131 DNA topoisomerase N4T41_01320 PF01751 Toprim domain N4T41_01320 PF01396 Topoisomerase DNA binding C4 zinc finger N4T41_01340 PF08240 Alcohol dehydrogenase GroES-like domain N4T41_01340 PF00107 Zinc-binding dehydrogenase N4T41_01380 PF03050 Transposase IS66 family N4T41_01380 PF13005 zinc-finger binding domain of transposase IS66 N4T41_01380 PF13817 IS66 C-terminal element N4T41_01380 PF13007 Transposase C of IS166 homeodomain N4T41_01400 PF01555 DNA methylase N4T41_01410 PF00565 Staphylococcal nuclease homologue N4T41_01465 PF18337 RapA N-terminal Tudor like domain N4T41_01465 PF00176 SNF2 family N-terminal domain N4T41_01465 PF12137 RNA polymerase recycling family C-terminal N4T41_01465 PF00271 Helicase conserved C-terminal domain N4T41_01465 PF18339 RapA N-terminal Tudor like domain 1 N4T41_01560 PF17841 BID domain of Bartonella effector protein (Bep) N4T41_01560 PF02661 Fic/DOC family N4T41_01700 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system N4T41_01725 PF01476 LysM domain N4T41_01725 PF08525 Opacity-associated protein A N-terminal motif N4T41_01725 PF01551 Peptidase family M23 N4T41_01775 PF11799 impB/mucB/samB family C-terminal domain N4T41_01775 PF13438 Domain of unknown function (DUF4113) N4T41_01775 PF00817 impB/mucB/samB family N4T41_01780 PF00717 Peptidase S24-like N4T41_01795 PF13356 Arm DNA-binding domain N4T41_01795 PF00589 Phage integrase family N4T41_01800 PF01411 tRNA synthetases class II (A) N4T41_01800 PF02272 DHHA1 domain N4T41_01800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N4T41_01805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N4T41_01805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N4T41_01810 PF13393 Histidyl-tRNA synthetase N4T41_01815 PF00709 Adenylosuccinate synthetase N4T41_01830 PF00248 Aldo/keto reductase family N4T41_01835 PF00027 Cyclic nucleotide-binding domain N4T41_01835 PF13545 Crp-like helix-turn-helix domain N4T41_01845 PF02566 OsmC-like protein N4T41_01860 PF17871 AAA lid domain N4T41_01860 PF00004 ATPase family associated with various cellular activities (AAA) N4T41_01860 PF07724 AAA domain (Cdc48 subfamily) N4T41_01860 PF02861 Clp amino terminal domain, pathogenicity island component N4T41_01860 PF10431 C-terminal, D2-small domain, of ClpB protein N4T41_01875 PF10672 S-adenosylmethionine-dependent methyltransferase N4T41_01875 PF02926 THUMP domain N4T41_01875 PF01170 Putative RNA methylase family UPF0020 N4T41_01885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N4T41_01885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N4T41_01890 PF01979 Amidohydrolase family N4T41_01895 PF13488 Glycine zipper N4T41_01895 PF00691 OmpA family N4T41_01905 PF00043 Glutathione S-transferase, C-terminal domain N4T41_01905 PF13417 Glutathione S-transferase, N-terminal domain N4T41_01910 PF02390 Putative methyltransferase N4T41_01920 PF00043 Glutathione S-transferase, C-terminal domain N4T41_01920 PF02798 Glutathione S-transferase, N-terminal domain N4T41_01930 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_01930 PF13192 Thioredoxin domain N4T41_01950 PF00578 AhpC/TSA family N4T41_01950 PF10417 C-terminal domain of 1-Cys peroxiredoxin N4T41_01955 PF04408 Helicase associated domain (HA2) N4T41_01955 PF11898 Domain of unknown function (DUF3418) N4T41_01955 PF00270 DEAD/DEAH box helicase N4T41_01955 PF00271 Helicase conserved C-terminal domain N4T41_01955 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N4T41_01960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N4T41_01960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N4T41_01970 PF07690 Major Facilitator Superfamily N4T41_01975 PF03594 Benzoate membrane transport protein N4T41_01980 PF00106 short chain dehydrogenase N4T41_01985 PF00970 Oxidoreductase FAD-binding domain N4T41_01985 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T41_01985 PF00175 Oxidoreductase NAD-binding domain N4T41_01995 PF00355 Rieske [2Fe-2S] domain N4T41_01995 PF00848 Ring hydroxylating alpha subunit (catalytic domain) N4T41_02005 PF03466 LysR substrate binding domain N4T41_02005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_02015 PF00175 Oxidoreductase NAD-binding domain N4T41_02015 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T41_02015 PF00970 Oxidoreductase FAD-binding domain N4T41_02025 PF04945 YHS domain N4T41_02025 PF02332 Methane/Phenol/Toluene Hydroxylase N4T41_02030 PF02406 MmoB/DmpM family N4T41_02035 PF02332 Methane/Phenol/Toluene Hydroxylase N4T41_02040 PF06099 Phenol hydroxylase subunit N4T41_02050 PF06505 Activator of aromatic catabolism N4T41_02050 PF02954 Bacterial regulatory protein, Fis family N4T41_02050 PF02830 V4R domain N4T41_02050 PF00158 Sigma-54 interaction domain N4T41_02060 PF00403 Heavy-metal-associated domain N4T41_02065 PF09278 MerR, DNA binding N4T41_02065 PF00376 MerR family regulatory protein N4T41_02100 PF13742 OB-fold nucleic acid binding domain N4T41_02100 PF02601 Exonuclease VII, large subunit N4T41_02130 PF01810 LysE type translocator N4T41_02135 PF00313 'Cold-shock' DNA-binding domain N4T41_02150 PF03807 NADP oxidoreductase coenzyme F420-dependent N4T41_02150 PF14748 Pyrroline-5-carboxylate reductase dimerisation N4T41_02175 PF07690 Major Facilitator Superfamily N4T41_02180 PF01638 HxlR-like helix-turn-helix N4T41_02200 PF13737 Transposase DDE domain N4T41_02230 PF02954 Bacterial regulatory protein, Fis family N4T41_02235 PF13361 UvrD-like helicase C-terminal domain N4T41_02235 PF00580 UvrD/REP helicase N-terminal domain N4T41_02245 PF09588 YqaJ-like viral recombinase domain N4T41_02450 PF00589 Phage integrase family N4T41_02460 PF09190 DALR domain N4T41_02460 PF01406 tRNA synthetases class I (C) catalytic domain N4T41_02465 PF00571 CBS domain N4T41_02465 PF01380 SIS domain N4T41_02480 PF03968 OstA-like protein N4T41_02485 PF00005 ABC transporter N4T41_02485 PF12399 Branched-chain amino acid ATP-binding cassette transporter N4T41_02490 PF02321 Outer membrane efflux protein N4T41_02495 PF00664 ABC transporter transmembrane region N4T41_02495 PF03412 Peptidase C39 family N4T41_02495 PF00005 ABC transporter N4T41_02505 PF01205 Uncharacterized protein family UPF0029 N4T41_02510 PF00132 Bacterial transferase hexapeptide (six repeats) N4T41_02520 PF01596 O-methyltransferase N4T41_02530 PF00037 4Fe-4S binding domain N4T41_02530 PF11953 Domain of unknown function (DUF3470) N4T41_02540 PF00488 MutS domain V N4T41_02540 PF05190 MutS family domain IV N4T41_02540 PF05192 MutS domain III N4T41_02540 PF05188 MutS domain II N4T41_02540 PF01624 MutS domain I N4T41_02545 PF01037 Lrp/AsnC ligand binding domain N4T41_02550 PF00892 EamA-like transporter family N4T41_02560 PF03279 Bacterial lipid A biosynthesis acyltransferase N4T41_02575 PF07690 Major Facilitator Superfamily N4T41_02600 PF02525 Flavodoxin-like fold N4T41_02625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T41_02625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T41_02650 PF13296 Putative type VI secretion system Rhs element Vgr N4T41_02650 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) N4T41_02650 PF04717 Type VI secretion system, phage-baseplate injector N4T41_02655 PF03527 RHS protein N4T41_02655 PF05593 RHS Repeat N4T41_02660 PF13737 Transposase DDE domain N4T41_02670 PF00665 Integrase core domain N4T41_02670 PF13936 Helix-turn-helix domain N4T41_02675 PF13737 Transposase DDE domain N4T41_02695 PF13737 Transposase DDE domain N4T41_02705 PF03466 LysR substrate binding domain N4T41_02705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_02710 PF01566 Natural resistance-associated macrophage protein N4T41_02715 PF03746 LamB/YcsF family N4T41_02720 PF07286 Protein of unknown function (DUF1445) N4T41_02730 PF02785 Biotin carboxylase C-terminal domain N4T41_02730 PF00289 Biotin carboxylase, N-terminal domain N4T41_02730 PF00364 Biotin-requiring enzyme N4T41_02730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T41_02735 PF00654 Voltage gated chloride channel N4T41_02760 PF08240 Alcohol dehydrogenase GroES-like domain N4T41_02760 PF13823 Alcohol dehydrogenase GroES-associated N4T41_02760 PF00107 Zinc-binding dehydrogenase N4T41_02775 PF02785 Biotin carboxylase C-terminal domain N4T41_02775 PF00289 Biotin carboxylase, N-terminal domain N4T41_02775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T41_02780 PF02525 Flavodoxin-like fold N4T41_02785 PF01638 HxlR-like helix-turn-helix N4T41_02795 PF08753 NikR C terminal nickel binding domain N4T41_02795 PF01402 Ribbon-helix-helix protein, copG family N4T41_02800 PF01425 Amidase N4T41_02805 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T41_02810 PF00005 ABC transporter N4T41_02835 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath N4T41_02850 PF05947 Type VI secretion system, TssF N4T41_02865 PF06761 Intracellular multiplication and human macrophage-killing N4T41_02865 PF14331 ImcF-related N-terminal domain N4T41_02865 PF06744 Type VI secretion protein IcmF C-terminal N4T41_02875 PF01389 OmpA-like transmembrane domain N4T41_02875 PF00691 OmpA family N4T41_02890 PF10431 C-terminal, D2-small domain, of ClpB protein N4T41_02890 PF17871 AAA lid domain N4T41_02890 PF00004 ATPase family associated with various cellular activities (AAA) N4T41_02890 PF07724 AAA domain (Cdc48 subfamily) N4T41_02895 PF06812 ImpA, N-terminal, type VI secretion system N4T41_02900 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE N4T41_02920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_02920 PF03466 LysR substrate binding domain N4T41_02930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N4T41_02935 PF07690 Major Facilitator Superfamily N4T41_02950 PF02677 Epoxyqueuosine reductase QueH N4T41_02960 PF00376 MerR family regulatory protein N4T41_02960 PF09278 MerR, DNA binding N4T41_02970 PF00701 Dihydrodipicolinate synthetase family N4T41_02980 PF00392 Bacterial regulatory proteins, gntR family N4T41_02985 PF05544 Proline racemase N4T41_02990 PF01266 FAD dependent oxidoreductase N4T41_03000 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_03000 PF04324 BFD-like [2Fe-2S] binding domain N4T41_03010 PF00083 Sugar (and other) transporter N4T41_03015 PF00171 Aldehyde dehydrogenase family N4T41_03020 PF13520 Amino acid permease N4T41_03025 PF03313 Serine dehydratase alpha chain N4T41_03025 PF03315 Serine dehydratase beta chain N4T41_03030 PF00171 Aldehyde dehydrogenase family N4T41_03030 PF01575 MaoC like domain N4T41_03035 PF05138 Phenylacetic acid catabolic protein N4T41_03040 PF06243 Phenylacetic acid degradation B N4T41_03045 PF05138 Phenylacetic acid catabolic protein N4T41_03050 PF01883 Iron-sulfur cluster assembly protein N4T41_03055 PF00970 Oxidoreductase FAD-binding domain N4T41_03055 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T41_03055 PF00175 Oxidoreductase NAD-binding domain N4T41_03060 PF00378 Enoyl-CoA hydratase/isomerase N4T41_03065 PF00378 Enoyl-CoA hydratase/isomerase N4T41_03070 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain N4T41_03070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T41_03070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T41_03075 PF02803 Thiolase, C-terminal domain N4T41_03075 PF00108 Thiolase, N-terminal domain N4T41_03080 PF00501 AMP-binding enzyme N4T41_03080 PF14535 AMP-binding enzyme C-terminal domain N4T41_03085 PF08223 PaaX-like protein C-terminal domain N4T41_03085 PF07848 PaaX-like protein N4T41_03090 PF00132 Bacterial transferase hexapeptide (six repeats) N4T41_03095 PF03061 Thioesterase superfamily N4T41_03105 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) N4T41_03125 PF00199 Catalase N4T41_03130 PF01292 Prokaryotic cytochrome b561 N4T41_03150 PF12697 Alpha/beta hydrolase family N4T41_03155 PF01613 Flavin reductase like domain N4T41_03160 PF00296 Luciferase-like monooxygenase N4T41_03165 PF00171 Aldehyde dehydrogenase family N4T41_03175 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin N4T41_03190 PF00171 Aldehyde dehydrogenase family N4T41_03195 PF02627 Carboxymuconolactone decarboxylase family N4T41_03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_03200 PF03466 LysR substrate binding domain N4T41_03205 PF02525 Flavodoxin-like fold N4T41_03210 PF09339 IclR helix-turn-helix domain N4T41_03210 PF01614 Bacterial transcriptional regulator N4T41_03215 PF01494 FAD binding domain N4T41_03220 PF00392 Bacterial regulatory proteins, gntR family N4T41_03220 PF07702 UTRA domain N4T41_03230 PF08402 TOBE domain N4T41_03230 PF00005 ABC transporter N4T41_03235 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_03240 PF01266 FAD dependent oxidoreductase N4T41_03245 PF00266 Aminotransferase class-V N4T41_03250 PF13419 Haloacid dehalogenase-like hydrolase N4T41_03255 PF07690 Major Facilitator Superfamily N4T41_03260 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_03260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_03260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_03265 PF02515 CoA-transferase family III N4T41_03270 PF09339 IclR helix-turn-helix domain N4T41_03275 PF00378 Enoyl-CoA hydratase/isomerase N4T41_03280 PF03060 Nitronate monooxygenase N4T41_03290 PF16861 Carbamoyltransferase C-terminus N4T41_03290 PF02543 Carbamoyltransferase N-terminus N4T41_03295 PF01810 LysE type translocator N4T41_03305 PF13737 Transposase DDE domain N4T41_03310 PF09339 IclR helix-turn-helix domain N4T41_03315 PF02803 Thiolase, C-terminal domain N4T41_03315 PF00108 Thiolase, N-terminal domain N4T41_03320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T41_03320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T41_03320 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain N4T41_03330 PF00378 Enoyl-CoA hydratase/isomerase N4T41_03335 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_03335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_03335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_03340 PF07690 Major Facilitator Superfamily N4T41_03345 PF01144 Coenzyme A transferase N4T41_03350 PF01144 Coenzyme A transferase N4T41_03360 PF07690 Major Facilitator Superfamily N4T41_03370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_03370 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T41_03370 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_03370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_03385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_03385 PF03466 LysR substrate binding domain N4T41_03390 PF00682 HMGL-like N4T41_03395 PF18140 Propionyl-coenzyme A carboxylase BT domain N4T41_03395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T41_03395 PF00364 Biotin-requiring enzyme N4T41_03395 PF02785 Biotin carboxylase C-terminal domain N4T41_03395 PF00289 Biotin carboxylase, N-terminal domain N4T41_03400 PF00378 Enoyl-CoA hydratase/isomerase N4T41_03405 PF01039 Carboxyl transferase domain N4T41_03410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_03410 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_03410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_03415 PF00440 Bacterial regulatory proteins, tetR family N4T41_03420 PF00501 AMP-binding enzyme N4T41_03420 PF13193 AMP-binding enzyme C-terminal domain N4T41_03440 PF03466 LysR substrate binding domain N4T41_03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_03475 PF18146 Damage-inducible protein CinA KH domain N4T41_03475 PF00994 Probable molybdopterin binding domain N4T41_03475 PF02464 Competence-damaged protein N4T41_03485 PF06628 Catalase-related immune-responsive N4T41_03485 PF00199 Catalase N4T41_03485 PF18011 C-terminal domain found in long catalases N4T41_03510 PF00717 Peptidase S24-like N4T41_03520 PF01037 Lrp/AsnC ligand binding domain N4T41_03520 PF13404 AsnC-type helix-turn-helix domain N4T41_03530 PF00512 His Kinase A (phospho-acceptor) domain N4T41_03530 PF09308 LuxQ, periplasmic N4T41_03530 PF00072 Response regulator receiver domain N4T41_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_03535 PF00072 Response regulator receiver domain N4T41_03550 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_03555 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_03560 PF00005 ABC transporter N4T41_03565 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T41_03570 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T41_03585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_03585 PF03466 LysR substrate binding domain N4T41_03590 PF01810 LysE type translocator N4T41_03600 PF00266 Aminotransferase class-V N4T41_03610 PF00132 Bacterial transferase hexapeptide (six repeats) N4T41_03615 PF00581 Rhodanese-like domain N4T41_03625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_03625 PF03466 LysR substrate binding domain N4T41_03630 PF02798 Glutathione S-transferase, N-terminal domain N4T41_03635 PF02798 Glutathione S-transferase, N-terminal domain N4T41_03635 PF14834 Glutathione S-transferase, C-terminal domain N4T41_03640 PF03466 LysR substrate binding domain N4T41_03640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_03645 PF03788 LrgA family N4T41_03650 PF04172 LrgB-like family N4T41_03655 PF00155 Aminotransferase class I and II N4T41_03655 PF00392 Bacterial regulatory proteins, gntR family N4T41_03670 PF07690 Major Facilitator Superfamily N4T41_03680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_03680 PF03466 LysR substrate binding domain N4T41_03685 PF16957 Malonate decarboxylase, alpha subunit, transporter N4T41_03690 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase N4T41_03695 PF06857 Malonate decarboxylase delta subunit (MdcD) N4T41_03700 PF01039 Carboxyl transferase domain N4T41_03710 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG N4T41_03715 PF00698 Acyl transferase domain N4T41_03730 PF03466 LysR substrate binding domain N4T41_03730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_03735 PF00155 Aminotransferase class I and II N4T41_03735 PF00392 Bacterial regulatory proteins, gntR family N4T41_03745 PF02322 Cytochrome bd terminal oxidase subunit II N4T41_03750 PF01654 Cytochrome bd terminal oxidase subunit I N4T41_03765 PF00296 Luciferase-like monooxygenase N4T41_03770 PF00083 Sugar (and other) transporter N4T41_03785 PF04069 Substrate binding domain of ABC-type glycine betaine transport system N4T41_03795 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_03800 PF02668 Taurine catabolism dioxygenase TauD, TfdA family N4T41_03805 PF01177 Asp/Glu/Hydantoin racemase N4T41_03810 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin N4T41_03820 PF03466 LysR substrate binding domain N4T41_03820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_03840 PF13817 IS66 C-terminal element N4T41_03840 PF13007 Transposase C of IS166 homeodomain N4T41_03840 PF03050 Transposase IS66 family N4T41_03840 PF13005 zinc-finger binding domain of transposase IS66 N4T41_03845 PF13382 Adenine deaminase C-terminal domain N4T41_03845 PF01979 Amidohydrolase family N4T41_03855 PF03960 ArsC family N4T41_03860 PF01022 Bacterial regulatory protein, arsR family N4T41_03865 PF01758 Sodium Bile acid symporter family N4T41_03870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_03870 PF03466 LysR substrate binding domain N4T41_03885 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_03885 PF13192 Thioredoxin domain N4T41_03900 PF00132 Bacterial transferase hexapeptide (six repeats) N4T41_03905 PF00588 SpoU rRNA Methylase family N4T41_03910 PF01336 OB-fold nucleic acid binding domain N4T41_03910 PF02811 PHP domain N4T41_03910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N4T41_03910 PF14579 Helix-hairpin-helix motif N4T41_03910 PF07733 Bacterial DNA polymerase III alpha NTPase domain N4T41_03915 PF17763 Glutaminase/Asparaginase C-terminal domain N4T41_03915 PF00710 Asparaginase, N-terminal N4T41_03920 PF00375 Sodium:dicarboxylate symporter family N4T41_03925 PF00155 Aminotransferase class I and II N4T41_03930 PF01641 SelR domain N4T41_03935 PF00255 Glutathione peroxidase N4T41_03940 PF12833 Helix-turn-helix domain N4T41_03940 PF12852 Cupin N4T41_03950 PF00155 Aminotransferase class I and II N4T41_03955 PF08335 GlnD PII-uridylyltransferase N4T41_03955 PF01909 Nucleotidyltransferase domain N4T41_03955 PF01966 HD domain N4T41_03960 PF02222 ATP-grasp domain N4T41_03970 PF05437 Branched-chain amino acid transport protein (AzlD) N4T41_03975 PF03591 AzlC protein N4T41_04000 PF06071 Protein of unknown function (DUF933) N4T41_04000 PF01926 50S ribosome-binding GTPase N4T41_04005 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_04010 PF09383 NIL domain N4T41_04010 PF00005 ABC transporter N4T41_04015 PF03180 NLPA lipoprotein N4T41_04020 PF03180 NLPA lipoprotein N4T41_04025 PF00296 Luciferase-like monooxygenase N4T41_04035 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T41_04035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_04050 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_04055 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_04060 PF00005 ABC transporter N4T41_04070 PF01037 Lrp/AsnC ligand binding domain N4T41_04075 PF01709 Transcriptional regulator N4T41_04085 PF00440 Bacterial regulatory proteins, tetR family N4T41_04115 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin N4T41_04125 PF00892 EamA-like transporter family N4T41_04145 PF13953 PapC C-terminal domain N4T41_04145 PF00577 Outer membrane usher protein N4T41_04145 PF13954 PapC N-terminal domain N4T41_04150 PF02753 Pili assembly chaperone PapD, C-terminal domain N4T41_04150 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain N4T41_04155 PF16970 Type-1 fimbrial protein, A N4T41_04170 PF06968 Biotin and Thiamin Synthesis associated domain N4T41_04170 PF04055 Radical SAM superfamily N4T41_04175 PF08331 Domain of unknown function (DUF1730) N4T41_04180 PF01256 Carbohydrate kinase N4T41_04180 PF03853 YjeF-related protein N-terminus N4T41_04185 PF02075 Crossover junction endodeoxyribonuclease RuvC N4T41_04200 PF00905 Penicillin binding protein transpeptidase domain N4T41_04220 PF02772 S-adenosylmethionine synthetase, central domain N4T41_04220 PF00438 S-adenosylmethionine synthetase, N-terminal domain N4T41_04220 PF02773 S-adenosylmethionine synthetase, C-terminal domain N4T41_04225 PF00456 Transketolase, thiamine diphosphate binding domain N4T41_04225 PF02780 Transketolase, C-terminal domain N4T41_04225 PF02779 Transketolase, pyrimidine binding domain N4T41_04235 PF04264 YceI-like domain N4T41_04245 PF09992 Phosphodiester glycosidase N4T41_04255 PF05958 tRNA (Uracil-5-)-methyltransferase N4T41_04260 PF04229 GrpB protein N4T41_04265 PF18327 Proline utilization A proline dehydrogenase N-terminal domain N4T41_04265 PF14850 DNA-binding domain of Proline dehydrogenase N4T41_04265 PF01619 Proline dehydrogenase N4T41_04265 PF00171 Aldehyde dehydrogenase family N4T41_04270 PF01037 Lrp/AsnC ligand binding domain N4T41_04275 PF00474 Sodium:solute symporter family N4T41_04280 PF02146 Sir2 family N4T41_04285 PF01597 Glycine cleavage H-protein N4T41_04290 PF12833 Helix-turn-helix domain N4T41_04290 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term N4T41_04300 PF00664 ABC transporter transmembrane region N4T41_04300 PF00005 ABC transporter N4T41_04305 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) N4T41_04310 PF06912 Protein of unknown function (DUF1275) N4T41_04315 PF00375 Sodium:dicarboxylate symporter family N4T41_04330 PF08007 Cupin superfamily protein N4T41_04335 PF02545 Maf-like protein N4T41_04345 PF00162 Phosphoglycerate kinase N4T41_04355 PF01116 Fructose-bisphosphate aldolase class-II N4T41_04360 PF00639 PPIC-type PPIASE domain N4T41_04360 PF09312 SurA N-terminal domain N4T41_04365 PF04453 LPS transport system D N4T41_04365 PF03968 OstA-like protein N4T41_04370 PF01636 Phosphotransferase enzyme family N4T41_04375 PF00483 Nucleotidyl transferase N4T41_04380 PF02527 rRNA small subunit methyltransferase G N4T41_04385 PF13614 AAA domain N4T41_04390 PF02195 ParB-like nuclease domain N4T41_04390 PF17762 HTH domain found in ParB protein N4T41_04395 PF01618 MotA/TolQ/ExbB proton channel family N4T41_04405 PF00664 ABC transporter transmembrane region N4T41_04405 PF00005 ABC transporter N4T41_04410 PF02606 Tetraacyldisaccharide-1-P 4'-kinase N4T41_04415 PF02348 Cytidylyltransferase N4T41_04420 PF09115 DNA polymerase III, delta subunit, C terminal N4T41_04430 PF01026 TatD related DNase N4T41_04445 PF07963 Prokaryotic N-terminal methylation motif N4T41_04445 PF02501 Type II secretion system (T2SS), protein I N4T41_04450 PF11612 Type II secretion system (T2SS), protein J N4T41_04450 PF07963 Prokaryotic N-terminal methylation motif N4T41_04455 PF03934 Type II secretion system (T2SS), protein K N4T41_04465 PF03167 Uracil DNA glycosylase superfamily N4T41_04475 PF14437 MafB19-like deaminase N4T41_04485 PF02224 Cytidylate kinase N4T41_04490 PF00575 S1 RNA binding domain N4T41_04495 PF00216 Bacterial DNA-binding protein N4T41_04505 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N4T41_04515 PF00743 Flavin-binding monooxygenase-like N4T41_04525 PF03969 AFG1-like ATPase N4T41_04530 PF01274 Malate synthase N4T41_04540 PF02472 Biopolymer transport protein ExbD/TolR N4T41_04545 PF02472 Biopolymer transport protein ExbD/TolR N4T41_04550 PF01618 MotA/TolQ/ExbB proton channel family N4T41_04560 PF00593 TonB dependent receptor N4T41_04560 PF07715 TonB-dependent Receptor Plug Domain N4T41_04580 PF01432 Peptidase family M3 N4T41_04585 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_04590 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_04595 PF00005 ABC transporter N4T41_04595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4T41_04610 PF00459 Inositol monophosphatase family N4T41_04620 PF01649 Ribosomal protein S20 N4T41_04625 PF13460 NAD(P)H-binding N4T41_04630 PF03737 Aldolase/RraA N4T41_04650 PF02559 CarD-like/TRCF domain N4T41_04650 PF00270 DEAD/DEAH box helicase N4T41_04650 PF00271 Helicase conserved C-terminal domain N4T41_04650 PF03461 TRCF domain N4T41_04650 PF17757 UvrB interaction domain N4T41_04660 PF00211 Adenylate and Guanylate cyclase catalytic domain N4T41_04665 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T41_04670 PF00012 Hsp70 protein N4T41_04675 PF07743 HSCB C-terminal oligomerisation domain N4T41_04675 PF00226 DnaJ domain N4T41_04680 PF01521 Iron-sulphur cluster biosynthesis N4T41_04685 PF01592 NifU-like N terminal domain N4T41_04690 PF00266 Aminotransferase class-V N4T41_04695 PF02082 Transcriptional regulator N4T41_04710 PF00216 Bacterial DNA-binding protein N4T41_04715 PF09312 SurA N-terminal domain N4T41_04715 PF00639 PPIC-type PPIASE domain N4T41_04720 PF12833 Helix-turn-helix domain N4T41_04720 PF12852 Cupin N4T41_04725 PF00487 Fatty acid desaturase N4T41_04730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_04730 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_04730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_04735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_04735 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_04735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_04740 PF03109 ABC1 family N4T41_04750 PF04073 Aminoacyl-tRNA editing domain N4T41_04755 PF04183 IucA / IucC family N4T41_04755 PF06276 Ferric iron reductase FhuF-like transporter N4T41_04760 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) N4T41_04765 PF07690 Major Facilitator Superfamily N4T41_04770 PF06276 Ferric iron reductase FhuF-like transporter N4T41_04770 PF04183 IucA / IucC family N4T41_04775 PF04183 IucA / IucC family N4T41_04775 PF06276 Ferric iron reductase FhuF-like transporter N4T41_04785 PF03737 Aldolase/RraA N4T41_04790 PF07715 TonB-dependent Receptor Plug Domain N4T41_04790 PF00593 TonB dependent receptor N4T41_04815 PF13419 Haloacid dehalogenase-like hydrolase N4T41_04830 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase N4T41_04835 PF02277 Phosphoribosyltransferase N4T41_04840 PF00300 Histidine phosphatase superfamily (branch 1) N4T41_04850 PF02654 Cobalamin-5-phosphate synthase N4T41_04855 PF00793 DAHP synthetase I family N4T41_04860 PF01925 Sulfite exporter TauE/SafE N4T41_04880 PF07715 TonB-dependent Receptor Plug Domain N4T41_04880 PF00593 TonB dependent receptor N4T41_04885 PF02684 Lipid-A-disaccharide synthetase N4T41_04895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T41_04935 PF01230 HIT domain N4T41_04970 PF08241 Methyltransferase domain N4T41_04975 PF00561 alpha/beta hydrolase fold N4T41_04980 PF01053 Cys/Met metabolism PLP-dependent enzyme N4T41_04990 PF02575 YbaB/EbfC DNA-binding family N4T41_04995 PF02132 RecR protein N4T41_04995 PF13662 Toprim domain N4T41_05000 PF00570 HRDC domain N4T41_05000 PF01612 3'-5' exonuclease N4T41_05020 PF05166 YcgL domain N4T41_05030 PF00004 ATPase family associated with various cellular activities (AAA) N4T41_05030 PF01434 Peptidase family M41 N4T41_05030 PF17862 AAA+ lid domain N4T41_05040 PF00291 Pyridoxal-phosphate dependent enzyme N4T41_05045 PF05175 Methyltransferase small domain N4T41_05050 PF01264 Chorismate synthase N4T41_05055 PF00990 Diguanylate cyclase, GGDEF domain N4T41_05055 PF08448 PAS fold N4T41_05070 PF04055 Radical SAM superfamily N4T41_05075 PF00676 Dehydrogenase E1 component N4T41_05080 PF02780 Transketolase, C-terminal domain N4T41_05080 PF02779 Transketolase, pyrimidine binding domain N4T41_05085 PF00364 Biotin-requiring enzyme N4T41_05085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N4T41_05085 PF02817 e3 binding domain N4T41_05095 PF00106 short chain dehydrogenase N4T41_05100 PF08240 Alcohol dehydrogenase GroES-like domain N4T41_05100 PF00107 Zinc-binding dehydrogenase N4T41_05105 PF01062 Bestrophin, RFP-TM, chloride channel N4T41_05110 PF00072 Response regulator receiver domain N4T41_05110 PF00158 Sigma-54 interaction domain N4T41_05110 PF02954 Bacterial regulatory protein, Fis family N4T41_05115 PF04273 Putative phosphatase (DUF442) N4T41_05115 PF00753 Metallo-beta-lactamase superfamily N4T41_05130 PF01925 Sulfite exporter TauE/SafE N4T41_05145 PF12833 Helix-turn-helix domain N4T41_05145 PF06445 GyrI-like small molecule binding domain N4T41_05150 PF01638 HxlR-like helix-turn-helix N4T41_05155 PF02525 Flavodoxin-like fold N4T41_05165 PF07702 UTRA domain N4T41_05165 PF00392 Bacterial regulatory proteins, gntR family N4T41_05180 PF04069 Substrate binding domain of ABC-type glycine betaine transport system N4T41_05185 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_05190 PF00005 ABC transporter N4T41_05205 PF00665 Integrase core domain N4T41_05245 PF00970 Oxidoreductase FAD-binding domain N4T41_05245 PF00175 Oxidoreductase NAD-binding domain N4T41_05250 PF03358 NADPH-dependent FMN reductase N4T41_05310 PF01758 Sodium Bile acid symporter family N4T41_05320 PF03358 NADPH-dependent FMN reductase N4T41_05330 PF00239 Resolvase, N terminal domain N4T41_05330 PF02796 Helix-turn-helix domain of resolvase N4T41_05345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T41_05345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T41_05345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T41_05345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T41_05350 PF00809 Pterin binding enzyme N4T41_05360 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N4T41_05360 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N4T41_05365 PF02321 Outer membrane efflux protein N4T41_05370 PF00873 AcrB/AcrD/AcrF family N4T41_05375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T41_05385 PF09278 MerR, DNA binding N4T41_05385 PF00376 MerR family regulatory protein N4T41_05410 PF14461 Prokaryotic E2 family B N4T41_05410 PF00899 ThiF family N4T41_05430 PF00149 Calcineurin-like phosphoesterase N4T41_05445 PF00083 Sugar (and other) transporter N4T41_05450 PF07715 TonB-dependent Receptor Plug Domain N4T41_05450 PF00593 TonB dependent receptor N4T41_05455 PF10415 Fumarase C C-terminus N4T41_05455 PF00206 Lyase N4T41_05470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_05470 PF03466 LysR substrate binding domain N4T41_05475 PF03466 LysR substrate binding domain N4T41_05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_05480 PF00108 Thiolase, N-terminal domain N4T41_05480 PF02803 Thiolase, C-terminal domain N4T41_05485 PF02667 Short chain fatty acid transporter N4T41_05490 PF01144 Coenzyme A transferase N4T41_05495 PF01144 Coenzyme A transferase N4T41_05500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_05500 PF03466 LysR substrate binding domain N4T41_05510 PF13936 Helix-turn-helix domain N4T41_05510 PF00665 Integrase core domain N4T41_05525 PF00440 Bacterial regulatory proteins, tetR family N4T41_05530 PF13737 Transposase DDE domain N4T41_05550 PF06719 AraC-type transcriptional regulator N-terminus N4T41_05550 PF12833 Helix-turn-helix domain N4T41_05555 PF07690 Major Facilitator Superfamily N4T41_05560 PF01738 Dienelactone hydrolase family N4T41_05575 PF01613 Flavin reductase like domain N4T41_05585 PF14525 AraC-binding-like domain N4T41_05585 PF12833 Helix-turn-helix domain N4T41_05590 PF00175 Oxidoreductase NAD-binding domain N4T41_05590 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T41_05590 PF00970 Oxidoreductase FAD-binding domain N4T41_05595 PF00866 Ring hydroxylating beta subunit N4T41_05600 PF00848 Ring hydroxylating alpha subunit (catalytic domain) N4T41_05600 PF00355 Rieske [2Fe-2S] domain N4T41_05605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_05605 PF03459 TOBE domain N4T41_05615 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_05620 PF03459 TOBE domain N4T41_05620 PF00005 ABC transporter N4T41_05625 PF00106 short chain dehydrogenase N4T41_05630 PF00550 Phosphopantetheine attachment site N4T41_05630 PF00857 Isochorismatase family N4T41_05640 PF00149 Calcineurin-like phosphoesterase N4T41_05645 PF13089 Polyphosphate kinase N-terminal domain N4T41_05645 PF17941 Polyphosphate kinase C-terminal domain 1 N4T41_05645 PF02503 Polyphosphate kinase middle domain N4T41_05645 PF13090 Polyphosphate kinase C-terminal domain 2 N4T41_05650 PF08042 PqqA family N4T41_05655 PF12706 Beta-lactamase superfamily domain N4T41_05660 PF03070 TENA/THI-4/PQQC family N4T41_05665 PF05402 Coenzyme PQQ synthesis protein D (PqqD) N4T41_05670 PF13186 Iron-sulfur cluster-binding domain N4T41_05670 PF04055 Radical SAM superfamily N4T41_05675 PF01244 Membrane dipeptidase (Peptidase family M19) N4T41_05710 PF00199 Catalase N4T41_05720 PF08240 Alcohol dehydrogenase GroES-like domain N4T41_05720 PF00107 Zinc-binding dehydrogenase N4T41_05735 PF13953 PapC C-terminal domain N4T41_05735 PF13954 PapC N-terminal domain N4T41_05735 PF00577 Outer membrane usher protein N4T41_05740 PF02753 Pili assembly chaperone PapD, C-terminal domain N4T41_05740 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain N4T41_05755 PF00672 HAMP domain N4T41_05755 PF16527 Two-component sensor protein CpxA, periplasmic domain N4T41_05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_05755 PF00512 His Kinase A (phospho-acceptor) domain N4T41_05775 PF07690 Major Facilitator Superfamily N4T41_05780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_05790 PF04607 Region found in RelA / SpoT proteins N4T41_05790 PF02824 TGS domain N4T41_05790 PF13291 ACT domain N4T41_05800 PF01975 Survival protein SurE N4T41_05825 PF07690 Major Facilitator Superfamily N4T41_05835 PF13737 Transposase DDE domain N4T41_05845 PF00665 Integrase core domain N4T41_05845 PF13936 Helix-turn-helix domain N4T41_05855 PF00196 Bacterial regulatory proteins, luxR family N4T41_05885 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family N4T41_05890 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N4T41_05890 PF14572 Phosphoribosyl synthetase-associated domain N4T41_05910 PF00005 ABC transporter N4T41_05915 PF01032 FecCD transport family N4T41_05925 PF08240 Alcohol dehydrogenase GroES-like domain N4T41_05925 PF00107 Zinc-binding dehydrogenase N4T41_05930 PF12833 Helix-turn-helix domain N4T41_05930 PF06719 AraC-type transcriptional regulator N-terminus N4T41_05935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N4T41_05935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N4T41_05940 PF07690 Major Facilitator Superfamily N4T41_05945 PF01370 NAD dependent epimerase/dehydratase family N4T41_05950 PF03466 LysR substrate binding domain N4T41_05950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_05960 PF00920 Dehydratase family N4T41_05965 PF00171 Aldehyde dehydrogenase family N4T41_05970 PF01047 MarR family N4T41_05975 PF01613 Flavin reductase like domain N4T41_05980 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T41_06005 PF00893 Small Multidrug Resistance protein N4T41_06015 PF01266 FAD dependent oxidoreductase N4T41_06020 PF12833 Helix-turn-helix domain N4T41_06020 PF00072 Response regulator receiver domain N4T41_06035 PF13533 Biotin-lipoyl like N4T41_06050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_06050 PF03466 LysR substrate binding domain N4T41_06060 PF08450 SMP-30/Gluconolactonase/LRE-like region N4T41_06065 PF07702 UTRA domain N4T41_06065 PF00392 Bacterial regulatory proteins, gntR family N4T41_06075 PF04909 Amidohydrolase N4T41_06130 PF00106 short chain dehydrogenase N4T41_06145 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_06145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_06145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_06150 PF03466 LysR substrate binding domain N4T41_06150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_06155 PF09339 IclR helix-turn-helix domain N4T41_06155 PF01614 Bacterial transcriptional regulator N4T41_06160 PF00753 Metallo-beta-lactamase superfamily N4T41_06170 PF04143 Sulphur transport N4T41_06175 PF13340 Putative transposase of IS4/5 family (DUF4096) N4T41_06185 PF01011 PQQ enzyme repeat N4T41_06185 PF13360 PQQ-like domain N4T41_06190 PF04966 Carbohydrate-selective porin, OprB family N4T41_06195 PF05048 Periplasmic copper-binding protein (NosD) N4T41_06200 PF01487 Type I 3-dehydroquinase N4T41_06205 PF00775 Dioxygenase N4T41_06210 PF00775 Dioxygenase N4T41_06210 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal N4T41_06215 PF02627 Carboxymuconolactone decarboxylase family N4T41_06220 PF07690 Major Facilitator Superfamily N4T41_06225 PF00561 alpha/beta hydrolase fold N4T41_06230 PF00206 Lyase N4T41_06230 PF10397 Adenylosuccinate lyase C-terminus N4T41_06235 PF02803 Thiolase, C-terminal domain N4T41_06235 PF00108 Thiolase, N-terminal domain N4T41_06240 PF01144 Coenzyme A transferase N4T41_06245 PF01144 Coenzyme A transferase N4T41_06250 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N4T41_06255 PF04977 Septum formation initiator N4T41_06260 PF04239 Protein of unknown function (DUF421) N4T41_06265 PF00113 Enolase, C-terminal TIM barrel domain N4T41_06265 PF03952 Enolase, N-terminal domain N4T41_06270 PF00793 DAHP synthetase I family N4T41_06275 PF06418 CTP synthase N-terminus N4T41_06275 PF00117 Glutamine amidotransferase class-I N4T41_06305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T41_06305 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_06320 PF00793 DAHP synthetase I family N4T41_06325 PF02694 Uncharacterised BCR, YnfA/UPF0060 family N4T41_06330 PF02861 Clp amino terminal domain, pathogenicity island component N4T41_06330 PF17871 AAA lid domain N4T41_06330 PF00004 ATPase family associated with various cellular activities (AAA) N4T41_06330 PF07724 AAA domain (Cdc48 subfamily) N4T41_06330 PF10431 C-terminal, D2-small domain, of ClpB protein N4T41_06335 PF02617 ATP-dependent Clp protease adaptor protein ClpS N4T41_06345 PF01118 Semialdehyde dehydrogenase, NAD binding domain N4T41_06345 PF02774 Semialdehyde dehydrogenase, dimerisation domain N4T41_06370 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N4T41_06375 PF00585 C-terminal regulatory domain of Threonine dehydratase N4T41_06375 PF00291 Pyridoxal-phosphate dependent enzyme N4T41_06380 PF02254 TrkA-N domain N4T41_06380 PF02080 TrkA-C domain N4T41_06385 PF02386 Cation transport protein N4T41_06390 PF02253 Phospholipase A1 N4T41_06395 PF08367 Peptidase M16C associated N4T41_06395 PF05193 Peptidase M16 inactive domain N4T41_06395 PF00675 Insulinase (Peptidase family M16) N4T41_06400 PF07715 TonB-dependent Receptor Plug Domain N4T41_06400 PF00593 TonB dependent receptor N4T41_06410 PF00294 pfkB family carbohydrate kinase N4T41_06420 PF07290 Protein of unknown function (DUF1449) N4T41_06435 PF01654 Cytochrome bd terminal oxidase subunit I N4T41_06440 PF02322 Cytochrome bd terminal oxidase subunit II N4T41_06445 PF08173 Membrane bound YbgT-like protein N4T41_06460 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N4T41_06470 PF02881 SRP54-type protein, helical bundle domain N4T41_06470 PF00448 SRP54-type protein, GTPase domain N4T41_06495 PF00478 IMP dehydrogenase / GMP reductase domain N4T41_06495 PF00571 CBS domain N4T41_06500 PF00202 Aminotransferase class-III N4T41_06505 PF00462 Glutaredoxin N4T41_06515 PF03466 LysR substrate binding domain N4T41_06515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_06520 PF00557 Metallopeptidase family M24 N4T41_06525 PF05525 Branched-chain amino acid transport protein N4T41_06550 PF05524 PEP-utilising enzyme, N-terminal N4T41_06550 PF02896 PEP-utilising enzyme, TIM barrel domain N4T41_06550 PF00391 PEP-utilising enzyme, mobile domain N4T41_06550 PF00381 PTS HPr component phosphorylation site N4T41_06550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N4T41_06555 PF00294 pfkB family carbohydrate kinase N4T41_06560 PF02378 Phosphotransferase system, EIIC N4T41_06560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N4T41_06580 PF03707 Bacterial signalling protein N terminal repeat N4T41_06580 PF00990 Diguanylate cyclase, GGDEF domain N4T41_06580 PF00563 EAL domain N4T41_06590 PF07995 Glucose / Sorbosone dehydrogenase N4T41_06595 PF02586 SOS response associated peptidase (SRAP) N4T41_06600 PF01740 STAS domain N4T41_06600 PF00916 Sulfate permease family N4T41_06605 PF05922 Peptidase inhibitor I9 N4T41_06605 PF00082 Subtilase family N4T41_06620 PF00324 Amino acid permease N4T41_06625 PF00266 Aminotransferase class-V N4T41_06630 PF01037 Lrp/AsnC ligand binding domain N4T41_06655 PF13419 Haloacid dehalogenase-like hydrolase N4T41_06660 PF01479 S4 domain N4T41_06665 PF00154 recA bacterial DNA recombination protein N4T41_06670 PF02631 RecX family N4T41_06685 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 N4T41_06685 PF00132 Bacterial transferase hexapeptide (six repeats) N4T41_06690 PF07977 FabA-like domain N4T41_06695 PF00132 Bacterial transferase hexapeptide (six repeats) N4T41_06695 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N4T41_06705 PF01103 Surface antigen N4T41_06705 PF07244 Surface antigen variable number repeat N4T41_06710 PF13180 PDZ domain N4T41_06710 PF17820 PDZ domain N4T41_06710 PF02163 Peptidase family M50 N4T41_06715 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N4T41_06715 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N4T41_06715 PF13288 DXP reductoisomerase C-terminal domain N4T41_06725 PF01255 Putative undecaprenyl diphosphate synthase N4T41_06730 PF01765 Ribosome recycling factor N4T41_06735 PF00696 Amino acid kinase family N4T41_06740 PF04055 Radical SAM superfamily N4T41_06740 PF18693 TRAM domain N4T41_06740 PF00919 Uncharacterized protein family UPF0004 N4T41_06750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_06750 PF00512 His Kinase A (phospho-acceptor) domain N4T41_06750 PF00989 PAS fold N4T41_06755 PF00158 Sigma-54 interaction domain N4T41_06755 PF00072 Response regulator receiver domain N4T41_06755 PF02954 Bacterial regulatory protein, Fis family N4T41_06760 PF00440 Bacterial regulatory proteins, tetR family N4T41_06765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N4T41_06765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N4T41_06775 PF02542 YgbB family N4T41_06785 PF01266 FAD dependent oxidoreductase N4T41_06805 PF10415 Fumarase C C-terminus N4T41_06805 PF00206 Lyase N4T41_06810 PF16363 GDP-mannose 4,6 dehydratase N4T41_06815 PF02635 DsrE/DsrF-like family N4T41_06840 PF00155 Aminotransferase class I and II N4T41_06840 PF00392 Bacterial regulatory proteins, gntR family N4T41_06845 PF01638 HxlR-like helix-turn-helix N4T41_06850 PF00994 Probable molybdopterin binding domain N4T41_06850 PF03454 MoeA C-terminal region (domain IV) N4T41_06850 PF03453 MoeA N-terminal region (domain I and II) N4T41_06855 PF01967 MoaC family N4T41_06855 PF00994 Probable molybdopterin binding domain N4T41_06860 PF02391 MoaE protein N4T41_06870 PF06463 Molybdenum Cofactor Synthesis C N4T41_06870 PF04055 Radical SAM superfamily N4T41_06875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N4T41_06875 PF00384 Molybdopterin oxidoreductase N4T41_06875 PF01568 Molydopterin dinucleotide binding domain N4T41_06880 PF12804 MobA-like NTP transferase domain N4T41_06885 PF01568 Molydopterin dinucleotide binding domain N4T41_06885 PF00384 Molybdopterin oxidoreductase N4T41_06885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N4T41_06885 PF04324 BFD-like [2Fe-2S] binding domain N4T41_06890 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N4T41_06890 PF04324 BFD-like [2Fe-2S] binding domain N4T41_06890 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N4T41_06890 PF18267 Rubredoxin NAD+ reductase C-terminal domain N4T41_06890 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_06905 PF00486 Transcriptional regulatory protein, C terminal N4T41_06905 PF00072 Response regulator receiver domain N4T41_06910 PF00005 ABC transporter N4T41_06915 PF00817 impB/mucB/samB family N4T41_06915 PF13438 Domain of unknown function (DUF4113) N4T41_06915 PF11799 impB/mucB/samB family C-terminal domain N4T41_06920 PF01220 Dehydroquinase class II N4T41_06925 PF00364 Biotin-requiring enzyme N4T41_06930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T41_06930 PF00289 Biotin carboxylase, N-terminal domain N4T41_06930 PF02785 Biotin carboxylase C-terminal domain N4T41_06940 PF12832 MFS_1 like family N4T41_06960 PF01645 Conserved region in glutamate synthase N4T41_06975 PF01565 FAD binding domain N4T41_06975 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N4T41_06980 PF01451 Low molecular weight phosphotyrosine protein phosphatase N4T41_06990 PF00465 Iron-containing alcohol dehydrogenase N4T41_06995 PF03061 Thioesterase superfamily N4T41_07000 PF05506 Domain of unknown function (DUF756) N4T41_07000 PF04185 Phosphoesterase family N4T41_07005 PF12169 DNA polymerase III subunits gamma and tau domain III N4T41_07005 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding N4T41_07005 PF12170 DNA polymerase III tau subunit V interacting with alpha N4T41_07010 PF07690 Major Facilitator Superfamily N4T41_07020 PF00144 Beta-lactamase N4T41_07025 PF01575 MaoC like domain N4T41_07035 PF02803 Thiolase, C-terminal domain N4T41_07035 PF00108 Thiolase, N-terminal domain N4T41_07045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_07045 PF03466 LysR substrate binding domain N4T41_07050 PF00923 Transaldolase/Fructose-6-phosphate aldolase N4T41_07055 PF01810 LysE type translocator N4T41_07060 PF01037 Lrp/AsnC ligand binding domain N4T41_07065 PF03594 Benzoate membrane transport protein N4T41_07070 PF02308 MgtC family N4T41_07105 PF00582 Universal stress protein family N4T41_07110 PF00005 ABC transporter N4T41_07110 PF12848 ABC transporter N4T41_07130 PF00593 TonB dependent receptor N4T41_07130 PF07715 TonB-dependent Receptor Plug Domain N4T41_07160 PF00924 Mechanosensitive ion channel N4T41_07165 PF00593 TonB dependent receptor N4T41_07165 PF07715 TonB-dependent Receptor Plug Domain N4T41_07170 PF00440 Bacterial regulatory proteins, tetR family N4T41_07185 PF01037 Lrp/AsnC ligand binding domain N4T41_07190 PF01817 Chorismate mutase type II N4T41_07210 PF01433 Peptidase family M1 domain N4T41_07210 PF17432 Domain of unknown function (DUF3458_C) ARM repeats N4T41_07210 PF11940 Domain of unknown function (DUF3458) Ig-like fold N4T41_07225 PF02110 Hydroxyethylthiazole kinase family N4T41_07235 PF05970 PIF1-like helicase N4T41_07235 PF14493 Helix-turn-helix domain N4T41_07240 PF00465 Iron-containing alcohol dehydrogenase N4T41_07255 PF00171 Aldehyde dehydrogenase family N4T41_07260 PF13520 Amino acid permease N4T41_07265 PF06751 Ethanolamine ammonia lyase large subunit (EutB) N4T41_07270 PF05985 Ethanolamine ammonia-lyase light chain (EutC) N4T41_07275 PF00117 Glutamine amidotransferase class-I N4T41_07275 PF00958 GMP synthase C terminal domain N4T41_07275 PF02540 NAD synthase N4T41_07280 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain N4T41_07280 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4T41_07285 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N4T41_07290 PF00149 Calcineurin-like phosphoesterase N4T41_07300 PF00881 Nitroreductase family N4T41_07310 PF17209 Hfq protein N4T41_07320 PF08676 MutL C terminal dimerisation domain N4T41_07320 PF01119 DNA mismatch repair protein, C-terminal domain N4T41_07325 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE N4T41_07330 PF00849 RNA pseudouridylate synthase N4T41_07330 PF01479 S4 domain N4T41_07345 PF00849 RNA pseudouridylate synthase N4T41_07345 PF01479 S4 domain N4T41_07355 PF04284 Protein of unknown function (DUF441) N4T41_07375 PF07690 Major Facilitator Superfamily N4T41_07380 PF00520 Ion transport protein N4T41_07380 PF00027 Cyclic nucleotide-binding domain N4T41_07390 PF06434 Aconitate hydratase 2 N-terminus N4T41_07390 PF00330 Aconitase family (aconitate hydratase) N4T41_07390 PF11791 Aconitate B N-terminal domain N4T41_07400 PF00717 Peptidase S24-like N4T41_07405 PF11798 IMS family HHH motif N4T41_07405 PF11799 impB/mucB/samB family C-terminal domain N4T41_07405 PF00817 impB/mucB/samB family N4T41_07405 PF13438 Domain of unknown function (DUF4113) N4T41_07460 PF13936 Helix-turn-helix domain N4T41_07460 PF00665 Integrase core domain N4T41_07480 PF13817 IS66 C-terminal element N4T41_07480 PF03050 Transposase IS66 family N4T41_07480 PF13005 zinc-finger binding domain of transposase IS66 N4T41_07480 PF13007 Transposase C of IS166 homeodomain N4T41_07510 PF02767 DNA polymerase III beta subunit, central domain N4T41_07510 PF02768 DNA polymerase III beta subunit, C-terminal domain N4T41_07510 PF00712 DNA polymerase III beta subunit, N-terminal domain N4T41_07550 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N4T41_07770 PF01695 IstB-like ATP binding protein N4T41_07780 PF00145 C-5 cytosine-specific DNA methylase N4T41_07865 PF00929 Exonuclease N4T41_07905 PF07244 Surface antigen variable number repeat N4T41_07905 PF01103 Surface antigen N4T41_07905 PF17243 POTRA domain TamA domain 1 N4T41_07915 PF03232 Ubiquinone biosynthesis protein COQ7 N4T41_07925 PF00120 Glutamine synthetase, catalytic domain N4T41_07930 PF00072 Response regulator receiver domain N4T41_07930 PF00486 Transcriptional regulatory protein, C terminal N4T41_07935 PF13493 Domain of unknown function (DUF4118) N4T41_07935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_07935 PF00512 His Kinase A (phospho-acceptor) domain N4T41_07935 PF02702 Osmosensitive K+ channel His kinase sensor domain N4T41_07940 PF02669 K+-transporting ATPase, c chain N4T41_07950 PF03814 Potassium-transporting ATPase A subunit N4T41_07965 PF03109 ABC1 family N4T41_07970 PF00899 ThiF family N4T41_07975 PF01613 Flavin reductase like domain N4T41_07980 PF13193 AMP-binding enzyme C-terminal domain N4T41_07980 PF00501 AMP-binding enzyme N4T41_07985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_07985 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_07985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_07990 PF00106 short chain dehydrogenase N4T41_07995 PF12833 Helix-turn-helix domain N4T41_08000 PF13847 Methyltransferase domain N4T41_08000 PF17827 PrmC N-terminal domain N4T41_08005 PF03462 PCRF domain N4T41_08005 PF00472 RF-1 domain N4T41_08015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_08015 PF03466 LysR substrate binding domain N4T41_08030 PF00296 Luciferase-like monooxygenase N4T41_08040 PF13994 PgaD-like protein N4T41_08045 PF00535 Glycosyl transferase family 2 N4T41_08060 PF03618 Kinase/pyrophosphorylase N4T41_08075 PF06481 COX Aromatic Rich Motif N4T41_08075 PF00116 Cytochrome C oxidase subunit II, periplasmic domain N4T41_08080 PF00115 Cytochrome C and Quinol oxidase polypeptide I N4T41_08085 PF00510 Cytochrome c oxidase subunit III N4T41_08090 PF03626 Prokaryotic Cytochrome C oxidase subunit IV N4T41_08095 PF01040 UbiA prenyltransferase family N4T41_08100 PF01250 Ribosomal protein S6 N4T41_08105 PF01084 Ribosomal protein S18 N4T41_08110 PF03948 Ribosomal protein L9, C-terminal domain N4T41_08110 PF01281 Ribosomal protein L9, N-terminal domain N4T41_08115 PF00772 DnaB-like helicase N terminal domain N4T41_08115 PF03796 DnaB-like helicase C terminal domain N4T41_08120 PF00842 Alanine racemase, C-terminal domain N4T41_08120 PF01168 Alanine racemase, N-terminal domain N4T41_08130 PF08379 Bacterial transglutaminase-like N-terminal region N4T41_08130 PF01841 Transglutaminase-like superfamily N4T41_08140 PF14403 Circularly permuted ATP-grasp type 2 N4T41_08150 PF01134 Glucose inhibited division protein A N4T41_08150 PF13932 GidA associated domain N4T41_08170 PF02954 Bacterial regulatory protein, Fis family N4T41_08175 PF01808 AICARFT/IMPCHase bienzyme N4T41_08175 PF02142 MGS-like domain N4T41_08180 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N4T41_08180 PF02843 Phosphoribosylglycinamide synthetase, C domain N4T41_08180 PF02844 Phosphoribosylglycinamide synthetase, N domain N4T41_08185 PF03180 NLPA lipoprotein N4T41_08190 PF00005 ABC transporter N4T41_08190 PF09383 NIL domain N4T41_08195 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_08200 PF16123 Hydroxyacylglutathione hydrolase C-terminus N4T41_08200 PF00753 Metallo-beta-lactamase superfamily N4T41_08210 PF00375 Sodium:dicarboxylate symporter family N4T41_08230 PF07995 Glucose / Sorbosone dehydrogenase N4T41_08235 PF13737 Transposase DDE domain N4T41_08240 PF00892 EamA-like transporter family N4T41_08245 PF01177 Asp/Glu/Hydantoin racemase N4T41_08255 PF02470 MlaD protein N4T41_08260 PF04403 Paraquat-inducible protein A N4T41_08270 PF02080 TrkA-C domain N4T41_08270 PF06826 Predicted Permease Membrane Region N4T41_08275 PF00155 Aminotransferase class I and II N4T41_08285 PF13936 Helix-turn-helix domain N4T41_08285 PF00665 Integrase core domain N4T41_08305 PF00083 Sugar (and other) transporter N4T41_08305 PF08946 Osmosensory transporter coiled coil N4T41_08355 PF00392 Bacterial regulatory proteins, gntR family N4T41_08355 PF07729 FCD domain N4T41_08365 PF03616 Sodium/glutamate symporter N4T41_08370 PF00561 alpha/beta hydrolase fold N4T41_08395 PF04076 Bacterial OB fold (BOF) protein N4T41_08425 PF00324 Amino acid permease N4T41_08430 PF00171 Aldehyde dehydrogenase family N4T41_08435 PF00202 Aminotransferase class-III N4T41_08440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_08440 PF03466 LysR substrate binding domain N4T41_08475 PF04829 Pre-toxin domain with VENN motif N4T41_08475 PF05860 haemagglutination activity domain N4T41_08475 PF13332 Hemagglutinin repeat N4T41_08475 PF13018 Extended Signal Peptide of Type V secretion system N4T41_08475 PF13018 Extended Signal Peptide of Type V secretion system N4T41_08475 PF05860 haemagglutination activity domain N4T41_08475 PF13332 Hemagglutinin repeat N4T41_08475 PF04829 Pre-toxin domain with VENN motif N4T41_08480 PF17287 POTRA domain N4T41_08480 PF08479 POTRA domain, ShlB-type N4T41_08480 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB N4T41_08515 PF00069 Protein kinase domain N4T41_08535 PF00814 Glycoprotease family N4T41_08540 PF01165 Ribosomal protein S21 N4T41_08545 PF09424 Yqey-like protein N4T41_08550 PF01435 Peptidase family M48 N4T41_08555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4T41_08555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4T41_08570 PF00156 Phosphoribosyl transferase domain N4T41_08575 PF02674 Colicin V production protein N4T41_08580 PF01180 Dihydroorotate dehydrogenase N4T41_08600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N4T41_08600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N4T41_08605 PF00881 Nitroreductase family N4T41_08615 PF00271 Helicase conserved C-terminal domain N4T41_08615 PF00270 DEAD/DEAH box helicase N4T41_08620 PF00313 'Cold-shock' DNA-binding domain N4T41_08635 PF04542 Sigma-70 region 2 N4T41_08635 PF00140 Sigma-70 factor, region 1.2 N4T41_08635 PF04545 Sigma-70, region 4 N4T41_08640 PF04241 Protein of unknown function (DUF423) N4T41_08650 PF05690 Thiazole biosynthesis protein ThiG N4T41_08660 PF03883 Peroxide stress protein YaaA N4T41_08670 PF00753 Metallo-beta-lactamase superfamily N4T41_08675 PF07687 Peptidase dimerisation domain N4T41_08675 PF01546 Peptidase family M20/M25/M40 N4T41_08685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N4T41_08690 PF00800 Prephenate dehydratase N4T41_08690 PF01817 Chorismate mutase type II N4T41_08690 PF01842 ACT domain N4T41_08695 PF00756 Putative esterase N4T41_08700 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_08700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_08700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_08705 PF00375 Sodium:dicarboxylate symporter family N4T41_08710 PF02885 Glycosyl transferase family, helical bundle domain N4T41_08710 PF00591 Glycosyl transferase family, a/b domain N4T41_08715 PF07023 Protein of unknown function (DUF1315) N4T41_08720 PF01513 ATP-NAD kinase N4T41_08725 PF00912 Transglycosylase N4T41_08725 PF00905 Penicillin binding protein transpeptidase domain N4T41_08725 PF14814 Bifunctional transglycosylase second domain N4T41_08735 PF00293 NUDIX domain N4T41_08745 PF08521 Two-component sensor kinase N-terminal N4T41_08745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_08745 PF00512 His Kinase A (phospho-acceptor) domain N4T41_08750 PF00486 Transcriptional regulatory protein, C terminal N4T41_08750 PF00072 Response regulator receiver domain N4T41_08760 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N4T41_08760 PF00437 Type II/IV secretion system protein N4T41_08770 PF18389 TrmO C-terminal domain N4T41_08770 PF01980 tRNA-methyltransferase O N4T41_08775 PF00970 Oxidoreductase FAD-binding domain N4T41_08775 PF00175 Oxidoreductase NAD-binding domain N4T41_08780 PF02567 Phenazine biosynthesis-like protein N4T41_08785 PF00392 Bacterial regulatory proteins, gntR family N4T41_08785 PF00155 Aminotransferase class I and II N4T41_08790 PF01136 Peptidase family U32 N4T41_08790 PF16325 Peptidase family U32 C-terminal domain N4T41_08795 PF00037 4Fe-4S binding domain N4T41_08800 PF00893 Small Multidrug Resistance protein N4T41_08805 PF00005 ABC transporter N4T41_08810 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_08815 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_08840 PF13533 Biotin-lipoyl like N4T41_08845 PF00873 AcrB/AcrD/AcrF family N4T41_08850 PF02321 Outer membrane efflux protein N4T41_08855 PF00464 Serine hydroxymethyltransferase N4T41_08960 PF01476 LysM domain N4T41_08960 PF08525 Opacity-associated protein A N-terminal motif N4T41_08960 PF01551 Peptidase family M23 N4T41_09170 PF03796 DnaB-like helicase C terminal domain N4T41_09170 PF14528 LAGLIDADG-like domain N4T41_09170 PF00772 DnaB-like helicase N terminal domain N4T41_09275 PF00589 Phage integrase family N4T41_09280 PF00005 ABC transporter N4T41_09285 PF01061 ABC-2 type transporter N4T41_09290 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term N4T41_09290 PF14489 QueF-like protein N4T41_09300 PF01098 Cell cycle protein N4T41_09305 PF13406 Transglycosylase SLT domain N4T41_09310 PF03330 Lytic transglycolase N4T41_09310 PF05036 Sporulation related domain N4T41_09330 PF12833 Helix-turn-helix domain N4T41_09340 PF00889 Elongation factor TS N4T41_09345 PF00318 Ribosomal protein S2 N4T41_09350 PF00557 Metallopeptidase family M24 N4T41_09360 PF07690 Major Facilitator Superfamily N4T41_09370 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_09370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T41_09375 PF04055 Radical SAM superfamily N4T41_09380 PF09317 Domain of unknown function (DUF1974) N4T41_09380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_09380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_09395 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain N4T41_09395 PF05221 S-adenosyl-L-homocysteine hydrolase N4T41_09400 PF02219 Methylenetetrahydrofolate reductase N4T41_09405 PF04452 RNA methyltransferase N4T41_09415 PF13737 Transposase DDE domain N4T41_09425 PF00390 Malic enzyme, N-terminal domain N4T41_09425 PF03949 Malic enzyme, NAD binding domain N4T41_09425 PF01515 Phosphate acetyl/butaryl transferase N4T41_09430 PF01743 Poly A polymerase head domain N4T41_09430 PF12627 Probable RNA and SrmB- binding site of polymerase A N4T41_09435 PF13180 PDZ domain N4T41_09440 PF01784 NIF3 (NGG1p interacting factor 3) N4T41_09445 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N4T41_09445 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N4T41_09480 PF01040 UbiA prenyltransferase family N4T41_09485 PF04345 Chorismate lyase N4T41_09490 PF03951 Glutamine synthetase, beta-Grasp domain N4T41_09490 PF00120 Glutamine synthetase, catalytic domain N4T41_09495 PF00854 POT family N4T41_09505 PF00589 Phage integrase family N4T41_09505 PF13356 Arm DNA-binding domain N4T41_09580 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system N4T41_09875 PF00117 Glutamine amidotransferase class-I N4T41_09880 PF01433 Peptidase family M1 domain N4T41_09880 PF11838 ERAP1-like C-terminal domain N4T41_09885 PF07715 TonB-dependent Receptor Plug Domain N4T41_09885 PF00593 TonB dependent receptor N4T41_09890 PF00591 Glycosyl transferase family, a/b domain N4T41_09890 PF02885 Glycosyl transferase family, helical bundle domain N4T41_09895 PF00218 Indole-3-glycerol phosphate synthase N4T41_09910 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain N4T41_09910 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase N4T41_09915 PF01799 [2Fe-2S] binding domain N4T41_09915 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T41_09920 PF01227 GTP cyclohydrolase I N4T41_09930 PF00144 Beta-lactamase N4T41_09945 PF05675 Protein of unknown function (DUF817) N4T41_09950 PF01208 Uroporphyrinogen decarboxylase (URO-D) N4T41_09960 PF00425 chorismate binding enzyme N4T41_09970 PF00975 Thioesterase domain N4T41_09975 PF00005 ABC transporter N4T41_09980 PF00664 ABC transporter transmembrane region N4T41_09980 PF00005 ABC transporter N4T41_09985 PF00282 Pyridoxal-dependent decarboxylase conserved domain N4T41_09990 PF00857 Isochorismatase family N4T41_09990 PF00550 Phosphopantetheine attachment site N4T41_09995 PF00501 AMP-binding enzyme N4T41_09995 PF13193 AMP-binding enzyme C-terminal domain N4T41_10000 PF00668 Condensation domain N4T41_10000 PF00550 Phosphopantetheine attachment site N4T41_10000 PF00501 AMP-binding enzyme N4T41_10005 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) N4T41_10010 PF00593 TonB dependent receptor N4T41_10010 PF07715 TonB-dependent Receptor Plug Domain N4T41_10015 PF01497 Periplasmic binding protein N4T41_10020 PF00005 ABC transporter N4T41_10030 PF01032 FecCD transport family N4T41_10035 PF00975 Thioesterase domain N4T41_10035 PF00550 Phosphopantetheine attachment site N4T41_10035 PF00668 Condensation domain N4T41_10035 PF00501 AMP-binding enzyme N4T41_10035 PF13193 AMP-binding enzyme C-terminal domain N4T41_10040 PF00550 Phosphopantetheine attachment site N4T41_10040 PF00501 AMP-binding enzyme N4T41_10040 PF13193 AMP-binding enzyme C-terminal domain N4T41_10040 PF00668 Condensation domain N4T41_10050 PF13309 HTH domain N4T41_10050 PF08348 YheO-like PAS domain N4T41_10055 PF00291 Pyridoxal-phosphate dependent enzyme N4T41_10060 PF02678 Pirin N4T41_10060 PF17954 Quercetinase C-terminal cupin domain N4T41_10080 PF04328 Selenoprotein, putative N4T41_10085 PF13722 5TM C-terminal transporter carbon starvation CstA N4T41_10085 PF02554 Carbon starvation protein CstA N4T41_10090 PF08207 Elongation factor P (EF-P) KOW-like domain N4T41_10090 PF09285 Elongation factor P, C-terminal N4T41_10090 PF01132 Elongation factor P (EF-P) OB domain N4T41_10095 PF04055 Radical SAM superfamily N4T41_10105 PF00563 EAL domain N4T41_10105 PF12792 CSS motif domain associated with EAL N4T41_10110 PF01197 Ribosomal protein L31 N4T41_10120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T41_10125 PF07690 Major Facilitator Superfamily N4T41_10130 PF13654 AAA domain N4T41_10130 PF05362 Lon protease (S16) C-terminal proteolytic domain N4T41_10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_10135 PF03466 LysR substrate binding domain N4T41_10140 PF01476 LysM domain N4T41_10140 PF01551 Peptidase family M23 N4T41_10145 PF01975 Survival protein SurE N4T41_10160 PF07943 Penicillin-binding protein 5, C-terminal domain N4T41_10160 PF00768 D-alanyl-D-alanine carboxypeptidase N4T41_10165 PF00132 Bacterial transferase hexapeptide (six repeats) N4T41_10170 PF13344 Haloacid dehalogenase-like hydrolase N4T41_10170 PF00293 NUDIX domain N4T41_10180 PF04356 Protein of unknown function (DUF489) N4T41_10185 PF00206 Lyase N4T41_10185 PF08328 Adenylosuccinate lyase C-terminal N4T41_10200 PF08496 Peptidase family S49 N-terminal N4T41_10200 PF01343 Peptidase family S49 N4T41_10205 PF00005 ABC transporter N4T41_10210 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_10215 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_10220 PF12849 PBP superfamily domain N4T41_10225 PF00324 Amino acid permease N4T41_10230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4T41_10230 PF00205 Thiamine pyrophosphate enzyme, central domain N4T41_10230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4T41_10235 PF01037 Lrp/AsnC ligand binding domain N4T41_10240 PF00171 Aldehyde dehydrogenase family N4T41_10245 PF00282 Pyridoxal-dependent decarboxylase conserved domain N4T41_10250 PF00202 Aminotransferase class-III N4T41_10260 PF17754 MftR C-terminal domain N4T41_10260 PF00440 Bacterial regulatory proteins, tetR family N4T41_10270 PF00487 Fatty acid desaturase N4T41_10275 PF00970 Oxidoreductase FAD-binding domain N4T41_10275 PF00175 Oxidoreductase NAD-binding domain N4T41_10275 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T41_10280 PF00440 Bacterial regulatory proteins, tetR family N4T41_10290 PF00176 SNF2 family N-terminal domain N4T41_10290 PF12137 RNA polymerase recycling family C-terminal N4T41_10290 PF00271 Helicase conserved C-terminal domain N4T41_10290 PF18337 RapA N-terminal Tudor like domain N4T41_10290 PF18339 RapA N-terminal Tudor like domain 1 N4T41_10295 PF00849 RNA pseudouridylate synthase N4T41_10305 PF00202 Aminotransferase class-III N4T41_10310 PF02581 Thiamine monophosphate synthase N4T41_10335 PF00675 Insulinase (Peptidase family M16) N4T41_10335 PF05193 Peptidase M16 inactive domain N4T41_10340 PF02567 Phenazine biosynthesis-like protein N4T41_10345 PF00375 Sodium:dicarboxylate symporter family N4T41_10350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_10350 PF03466 LysR substrate binding domain N4T41_10355 PF06779 Uncharacterised MFS-type transporter YbfB N4T41_10375 PF00180 Isocitrate/isopropylmalate dehydrogenase N4T41_10380 PF00849 RNA pseudouridylate synthase N4T41_10385 PF03971 Monomeric isocitrate dehydrogenase N4T41_10395 PF07943 Penicillin-binding protein 5, C-terminal domain N4T41_10395 PF00768 D-alanyl-D-alanine carboxypeptidase N4T41_10400 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_10405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T41_10410 PF03441 FAD binding domain of DNA photolyase N4T41_10410 PF00875 DNA photolyase N4T41_10440 PF02350 UDP-N-acetylglucosamine 2-epimerase N4T41_10455 PF03060 Nitronate monooxygenase N4T41_10460 PF01207 Dihydrouridine synthase (Dus) N4T41_10465 PF07759 Protein of unknown function (DUF1615) N4T41_10475 PF01472 PUA domain N4T41_10475 PF00696 Amino acid kinase family N4T41_10480 PF01018 GTP1/OBG N4T41_10480 PF01926 50S ribosome-binding GTPase N4T41_10495 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N4T41_10495 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N4T41_10500 PF00892 EamA-like transporter family N4T41_10510 PF12344 Ultra-violet resistance protein B N4T41_10510 PF00271 Helicase conserved C-terminal domain N4T41_10510 PF04851 Type III restriction enzyme, res subunit N4T41_10510 PF02151 UvrB/uvrC motif N4T41_10510 PF17757 UvrB interaction domain N4T41_10520 PF00665 Integrase core domain N4T41_10520 PF13936 Helix-turn-helix domain N4T41_10525 PF00990 Diguanylate cyclase, GGDEF domain N4T41_10525 PF17151 Periplasmic sensor domain N4T41_10535 PF00155 Aminotransferase class I and II N4T41_10575 PF00106 short chain dehydrogenase N4T41_10580 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) N4T41_10585 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ N4T41_10590 PF11967 Recombination protein O N terminal N4T41_10590 PF02565 Recombination protein O C terminal N4T41_10600 PF07650 KH domain N4T41_10600 PF01926 50S ribosome-binding GTPase N4T41_10605 PF00035 Double-stranded RNA binding motif N4T41_10605 PF14622 Ribonuclease-III-like N4T41_10615 PF10502 Signal peptidase, peptidase S26 N4T41_10620 PF06421 GTP-binding protein LepA C-terminus N4T41_10620 PF03144 Elongation factor Tu domain 2 N4T41_10620 PF00009 Elongation factor Tu GTP binding domain N4T41_10620 PF00679 Elongation factor G C-terminus N4T41_10635 PF02910 Fumarate reductase flavoprotein C-term N4T41_10635 PF00890 FAD binding domain N4T41_10645 PF02223 Thymidylate kinase N4T41_10655 PF01063 Amino-transferase class IV N4T41_10670 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_10675 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_10680 PF12857 TOBE-like domain N4T41_10680 PF00005 ABC transporter N4T41_10685 PF03466 LysR substrate binding domain N4T41_10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_10695 PF00132 Bacterial transferase hexapeptide (six repeats) N4T41_10695 PF14602 Hexapeptide repeat of succinyl-transferase N4T41_10695 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal N4T41_10705 PF06508 Queuosine biosynthesis protein QueC N4T41_10720 PF00578 AhpC/TSA family N4T41_10730 PF00293 NUDIX domain N4T41_10730 PF01467 Cytidylyltransferase-like N4T41_10735 PF00378 Enoyl-CoA hydratase/isomerase N4T41_10740 PF01784 NIF3 (NGG1p interacting factor 3) N4T41_10750 PF07690 Major Facilitator Superfamily N4T41_10755 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain N4T41_10755 PF02769 AIR synthase related protein, C-terminal domain N4T41_10755 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal N4T41_10760 PF01966 HD domain N4T41_10765 PF07499 RuvA, C-terminal domain N4T41_10765 PF01330 RuvA N terminal domain N4T41_10770 PF05491 RuvB C-terminal winged helix domain N4T41_10770 PF05496 Holliday junction DNA helicase RuvB P-loop domain N4T41_10770 PF17864 RuvB AAA lid domain N4T41_10775 PF01546 Peptidase family M20/M25/M40 N4T41_10775 PF07687 Peptidase dimerisation domain N4T41_10780 PF03061 Thioesterase superfamily N4T41_10785 PF01618 MotA/TolQ/ExbB proton channel family N4T41_10790 PF02472 Biopolymer transport protein ExbD/TolR N4T41_10800 PF07676 WD40-like Beta Propeller Repeat N4T41_10800 PF04052 TolB amino-terminal domain N4T41_10805 PF00691 OmpA family N4T41_10815 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain N4T41_10820 PF00588 SpoU rRNA Methylase family N4T41_10820 PF08032 RNA 2'-O ribose methyltransferase substrate binding N4T41_10850 PF00308 Bacterial dnaA protein N4T41_10850 PF08299 Bacterial dnaA protein helix-turn-helix N4T41_10850 PF11638 DnaA N-terminal domain N4T41_10855 PF01594 AI-2E family transporter N4T41_10860 PF00586 AIR synthase related protein, N-terminal domain N4T41_10860 PF02769 AIR synthase related protein, C-terminal domain N4T41_10865 PF00551 Formyl transferase N4T41_10870 PF12697 Alpha/beta hydrolase family N4T41_10875 PF06965 Na+/H+ antiporter 1 N4T41_10875 PF01343 Peptidase family S49 N4T41_10885 PF13567 Domain of unknown function (DUF4131) N4T41_10885 PF00753 Metallo-beta-lactamase superfamily N4T41_10885 PF03772 Competence protein N4T41_10890 PF00005 ABC transporter N4T41_10895 PF02687 FtsX-like permease family N4T41_10895 PF12704 MacB-like periplasmic core domain N4T41_10905 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 N4T41_10920 PF00266 Aminotransferase class-V N4T41_10930 PF13533 Biotin-lipoyl like N4T41_10950 PF00535 Glycosyl transferase family 2 N4T41_10965 PF00521 DNA gyrase/topoisomerase IV, subunit A N4T41_10965 PF03989 DNA gyrase C-terminal domain, beta-propeller N4T41_10970 PF01012 Electron transfer flavoprotein domain N4T41_10970 PF00766 Electron transfer flavoprotein FAD-binding domain N4T41_10975 PF01012 Electron transfer flavoprotein domain N4T41_10980 PF02899 Phage integrase, N-terminal SAM-like domain N4T41_10980 PF00589 Phage integrase family N4T41_10985 PF01810 LysE type translocator N4T41_10990 PF01678 Diaminopimelate epimerase N4T41_10995 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N4T41_10995 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N4T41_11005 PF00324 Amino acid permease N4T41_11010 PF18073 Rubredoxin metal binding domain N4T41_11020 PF00152 tRNA synthetases class II (D, K and N) N4T41_11025 PF11890 Domain of unknown function (DUF3410) N4T41_11025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4T41_11025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4T41_11030 PF06803 Protein of unknown function (DUF1232) N4T41_11035 PF02634 FdhD/NarQ family N4T41_11040 PF00384 Molybdopterin oxidoreductase N4T41_11045 PF02595 Glycerate kinase family N4T41_11060 PF00881 Nitroreductase family N4T41_11105 PF09857 Putative toxin of bacterial toxin-antitoxin pair N4T41_11115 PF00975 Thioesterase domain N4T41_11115 PF00668 Condensation domain N4T41_11115 PF00550 Phosphopantetheine attachment site N4T41_11115 PF13193 AMP-binding enzyme C-terminal domain N4T41_11115 PF00501 AMP-binding enzyme N4T41_11125 PF13737 Transposase DDE domain N4T41_11140 PF01272 Transcription elongation factor, GreA/GreB, C-term N4T41_11140 PF03449 Transcription elongation factor, N-terminal N4T41_11145 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4T41_11145 PF01464 Transglycosylase SLT domain N4T41_11155 PF01171 PP-loop family N4T41_11160 PF01464 Transglycosylase SLT domain N4T41_11165 PF01435 Peptidase family M48 N4T41_11175 PF00873 AcrB/AcrD/AcrF family N4T41_11180 PF03009 Glycerophosphoryl diester phosphodiesterase family N4T41_11190 PF01219 Prokaryotic diacylglycerol kinase N4T41_11195 PF00118 TCP-1/cpn60 chaperonin family N4T41_11200 PF00166 Chaperonin 10 Kd subunit N4T41_11215 PF00781 Diacylglycerol kinase catalytic domain N4T41_11220 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain N4T41_11220 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain N4T41_11225 PF01266 FAD dependent oxidoreductase N4T41_11225 PF16901 C-terminal domain of alpha-glycerophosphate oxidase N4T41_11230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N4T41_11230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N4T41_11235 PF00083 Sugar (and other) transporter N4T41_11250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N4T41_11250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N4T41_11265 PF09423 PhoD-like phosphatase N4T41_11265 PF16655 PhoD-like phosphatase, N-terminal domain N4T41_11285 PF00809 Pterin binding enzyme N4T41_11290 PF17862 AAA+ lid domain N4T41_11290 PF06480 FtsH Extracellular N4T41_11290 PF00004 ATPase family associated with various cellular activities (AAA) N4T41_11290 PF01434 Peptidase family M41 N4T41_11295 PF01728 FtsJ-like methyltransferase N4T41_11300 PF01985 CRS1 / YhbY (CRM) domain N4T41_11315 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N4T41_11315 PF00117 Glutamine amidotransferase class-I N4T41_11320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T41_11320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N4T41_11320 PF02142 MGS-like domain N4T41_11325 PF01272 Transcription elongation factor, GreA/GreB, C-term N4T41_11325 PF03449 Transcription elongation factor, N-terminal N4T41_11330 PF00132 Bacterial transferase hexapeptide (six repeats) N4T41_11335 PF00582 Universal stress protein family N4T41_11340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N4T41_11350 PF09587 Bacterial capsule synthesis protein PGA_cap N4T41_11365 PF00999 Sodium/hydrogen exchanger family N4T41_11370 PF04228 Putative neutral zinc metallopeptidase N4T41_11375 PF05661 Protein of unknown function (DUF808) N4T41_11380 PF00579 tRNA synthetases class I (W and Y) N4T41_11385 PF02629 CoA binding domain N4T41_11385 PF00549 CoA-ligase N4T41_11390 PF00549 CoA-ligase N4T41_11390 PF08442 ATP-grasp domain N4T41_11395 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_11395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T41_11400 PF02817 e3 binding domain N4T41_11400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N4T41_11400 PF00364 Biotin-requiring enzyme N4T41_11405 PF16078 2-oxoglutarate dehydrogenase N-terminus N4T41_11405 PF00676 Dehydrogenase E1 component N4T41_11405 PF16870 2-oxoglutarate dehydrogenase C-terminal N4T41_11405 PF02779 Transketolase, pyrimidine binding domain N4T41_11420 PF13085 2Fe-2S iron-sulfur cluster binding domain N4T41_11425 PF00890 FAD binding domain N4T41_11425 PF02910 Fumarate reductase flavoprotein C-term N4T41_11430 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N4T41_11435 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N4T41_11440 PF00285 Citrate synthase, C-terminal domain N4T41_11450 PF17773 UPF0176 acylphosphatase like domain N4T41_11450 PF00581 Rhodanese-like domain N4T41_11465 PF04546 Sigma-70, non-essential region N4T41_11465 PF03979 Sigma-70 factor, region 1.1 N4T41_11465 PF00140 Sigma-70 factor, region 1.2 N4T41_11465 PF04542 Sigma-70 region 2 N4T41_11465 PF04539 Sigma-70 region 3 N4T41_11465 PF04545 Sigma-70, region 4 N4T41_11470 PF04359 Protein of unknown function (DUF493) N4T41_11475 PF03099 Biotin/lipoate A/B protein ligase family N4T41_11485 PF00465 Iron-containing alcohol dehydrogenase N4T41_11490 PF13520 Amino acid permease N4T41_11495 PF03358 NADPH-dependent FMN reductase N4T41_11500 PF01638 HxlR-like helix-turn-helix N4T41_11505 PF00588 SpoU rRNA Methylase family N4T41_11510 PF10414 Sirohaem synthase dimerisation region N4T41_11510 PF14824 Sirohaem biosynthesis protein central N4T41_11510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N4T41_11515 PF02403 Seryl-tRNA synthetase N-terminal domain N4T41_11515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4T41_11525 PF03548 Outer membrane lipoprotein carrier protein LolA N4T41_11530 PF01016 Ribosomal L27 protein N4T41_11535 PF00829 Ribosomal prokaryotic L21 protein N4T41_11545 PF00348 Polyprenyl synthetase N4T41_11550 PF09190 DALR domain N4T41_11550 PF01406 tRNA synthetases class I (C) catalytic domain N4T41_11555 PF01569 PAP2 superfamily N4T41_11560 PF00529 HlyD membrane-fusion protein of T1SS N4T41_11560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T41_11565 PF00873 AcrB/AcrD/AcrF family N4T41_11570 PF02321 Outer membrane efflux protein N4T41_11575 PF01906 Putative heavy-metal-binding N4T41_11580 PF01906 Putative heavy-metal-binding N4T41_11600 PF08264 Anticodon-binding domain of tRNA N4T41_11600 PF00133 tRNA synthetases class I (I, L, M and V) N4T41_11600 PF10458 Valyl tRNA synthetase tRNA binding arm N4T41_11625 PF00909 Ammonium Transporter Family N4T41_11635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_11635 PF08521 Two-component sensor kinase N-terminal N4T41_11635 PF00512 His Kinase A (phospho-acceptor) domain N4T41_11640 PF00072 Response regulator receiver domain N4T41_11640 PF00486 Transcriptional regulatory protein, C terminal N4T41_11645 PF08019 Phosphoethanolamine transferase EptA/EptB N4T41_11645 PF00884 Sulfatase N4T41_11665 PF01734 Patatin-like phospholipase N4T41_11675 PF01145 SPFH domain / Band 7 family N4T41_11680 PF04237 YjbR N4T41_11685 PF00348 Polyprenyl synthetase N4T41_11690 PF04303 PrpF protein N4T41_11695 PF00324 Amino acid permease N4T41_11705 PF13356 Arm DNA-binding domain N4T41_11705 PF00589 Phage integrase family N4T41_11745 PF03796 DnaB-like helicase C terminal domain N4T41_11745 PF00772 DnaB-like helicase N terminal domain N4T41_11790 PF01048 Phosphorylase superfamily N4T41_11795 PF10609 NUBPL iron-transfer P-loop NTPase N4T41_11805 PF01588 Putative tRNA binding domain N4T41_11805 PF09334 tRNA synthetases class I (M) N4T41_11830 PF13533 Biotin-lipoyl like N4T41_11835 PF00291 Pyridoxal-phosphate dependent enzyme N4T41_11850 PF05552 Conserved TM helix N4T41_11865 PF00175 Oxidoreductase NAD-binding domain N4T41_11865 PF00970 Oxidoreductase FAD-binding domain N4T41_11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_11870 PF03466 LysR substrate binding domain N4T41_11875 PF00313 'Cold-shock' DNA-binding domain N4T41_11885 PF00361 Proton-conducting membrane transporter N4T41_11890 PF00361 Proton-conducting membrane transporter N4T41_11895 PF00361 Proton-conducting membrane transporter N4T41_11895 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N4T41_11900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L N4T41_11905 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 N4T41_11910 PF12838 4Fe-4S dicluster domain N4T41_11915 PF00146 NADH dehydrogenase N4T41_11920 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region N4T41_11920 PF00384 Molybdopterin oxidoreductase N4T41_11920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N4T41_11925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit N4T41_11925 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region N4T41_11925 PF10531 SLBB domain N4T41_11935 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit N4T41_11935 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit N4T41_11940 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit N4T41_11945 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 N4T41_11950 PF17151 Periplasmic sensor domain N4T41_11950 PF00990 Diguanylate cyclase, GGDEF domain N4T41_11960 PF00672 HAMP domain N4T41_11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_11960 PF00512 His Kinase A (phospho-acceptor) domain N4T41_11965 PF00072 Response regulator receiver domain N4T41_11965 PF00486 Transcriptional regulatory protein, C terminal N4T41_11975 PF00317 Ribonucleotide reductase, all-alpha domain N4T41_11975 PF02867 Ribonucleotide reductase, barrel domain N4T41_11975 PF03477 ATP cone domain N4T41_11985 PF00268 Ribonucleotide reductase, small chain N4T41_11995 PF02567 Phenazine biosynthesis-like protein N4T41_12025 PF17074 Darcynin, domain of unknown function N4T41_12030 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) N4T41_12030 PF06594 Haemolysin-type calcium binding protein related domain N4T41_12040 PF17074 Darcynin, domain of unknown function N4T41_12055 PF01613 Flavin reductase like domain N4T41_12060 PF01717 Cobalamin-independent synthase, Catalytic domain N4T41_12060 PF08267 Cobalamin-independent synthase, N-terminal domain N4T41_12085 PF03466 LysR substrate binding domain N4T41_12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_12090 PF07690 Major Facilitator Superfamily N4T41_12100 PF03466 LysR substrate binding domain N4T41_12100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_12105 PF14537 Cytochrome c3 N4T41_12105 PF00890 FAD binding domain N4T41_12115 PF02515 CoA-transferase family III N4T41_12120 PF07690 Major Facilitator Superfamily N4T41_12125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_12125 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_12125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_12130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_12130 PF03466 LysR substrate binding domain N4T41_12135 PF08240 Alcohol dehydrogenase GroES-like domain N4T41_12135 PF00107 Zinc-binding dehydrogenase N4T41_12140 PF00962 Adenosine/AMP deaminase N4T41_12165 PF02445 Quinolinate synthetase A protein N4T41_12170 PF01960 ArgJ family N4T41_12175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N4T41_12175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N4T41_12180 PF00893 Small Multidrug Resistance protein N4T41_12195 PF07731 Multicopper oxidase N4T41_12195 PF00394 Multicopper oxidase N4T41_12195 PF07732 Multicopper oxidase N4T41_12210 PF00834 Ribulose-phosphate 3 epimerase family N4T41_12220 PF00756 Putative esterase N4T41_12230 PF04445 Putative SAM-dependent methyltransferase N4T41_12235 PF00814 Glycoprotease family N4T41_12240 PF00132 Bacterial transferase hexapeptide (six repeats) N4T41_12245 PF00293 NUDIX domain N4T41_12285 PF00425 chorismate binding enzyme N4T41_12285 PF04715 Anthranilate synthase component I, N terminal region N4T41_12290 PF00155 Aminotransferase class I and II N4T41_12295 PF00815 Histidinol dehydrogenase N4T41_12300 PF01634 ATP phosphoribosyltransferase N4T41_12305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N4T41_12310 PF01722 BolA-like protein N4T41_12315 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N4T41_12320 PF04552 Sigma-54, DNA binding domain N4T41_12320 PF00309 Sigma-54 factor, Activator interacting domain (AID) N4T41_12320 PF04963 Sigma-54 factor, core binding domain N4T41_12365 PF00795 Carbon-nitrogen hydrolase N4T41_12375 PF01047 MarR family N4T41_12380 PF02566 OsmC-like protein N4T41_12385 PF00437 Type II/IV secretion system protein N4T41_12405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N4T41_12405 PF00476 DNA polymerase family A N4T41_12405 PF01367 5'-3' exonuclease, C-terminal SAM fold N4T41_12405 PF01612 3'-5' exonuclease N4T41_12410 PF02325 YGGT family N4T41_12415 PF14748 Pyrroline-5-carboxylate reductase dimerisation N4T41_12415 PF03807 NADP oxidoreductase coenzyme F420-dependent N4T41_12420 PF11734 TilS substrate C-terminal domain N4T41_12420 PF01171 PP-loop family N4T41_12420 PF09179 TilS substrate binding domain N4T41_12425 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N4T41_12430 PF02541 Ppx/GppA phosphatase family N4T41_12435 PF00085 Thioredoxin N4T41_12440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4T41_12440 PF07497 Rho termination factor, RNA-binding domain N4T41_12440 PF07498 Rho termination factor, N-terminal domain N4T41_12455 PF00216 Bacterial DNA-binding protein N4T41_12460 PF03484 tRNA synthetase B5 domain N4T41_12460 PF03147 Ferredoxin-fold anticodon binding domain N4T41_12460 PF01588 Putative tRNA binding domain N4T41_12460 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain N4T41_12460 PF03483 B3/4 domain N4T41_12465 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N4T41_12465 PF01409 tRNA synthetases class II core domain (F) N4T41_12480 PF00453 Ribosomal protein L20 N4T41_12485 PF01632 Ribosomal protein L35 N4T41_12495 PF07690 Major Facilitator Superfamily N4T41_12500 PF09335 SNARE associated Golgi protein N4T41_12505 PF00043 Glutathione S-transferase, C-terminal domain N4T41_12505 PF02798 Glutathione S-transferase, N-terminal domain N4T41_12510 PF00707 Translation initiation factor IF-3, C-terminal domain N4T41_12510 PF05198 Translation initiation factor IF-3, N-terminal domain N4T41_12515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4T41_12515 PF02824 TGS domain N4T41_12515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N4T41_12515 PF03129 Anticodon binding domain N4T41_12520 PF00501 AMP-binding enzyme N4T41_12520 PF13193 AMP-binding enzyme C-terminal domain N4T41_12525 PF04751 Protein of unknown function (DUF615) N4T41_12530 PF00381 PTS HPr component phosphorylation site N4T41_12535 PF03668 P-loop ATPase protein family N4T41_12540 PF02569 Pantoate-beta-alanine ligase N4T41_12545 PF02548 Ketopantoate hydroxymethyltransferase N4T41_12550 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N4T41_12555 PF12626 Polymerase A arginine-rich C-terminus N4T41_12555 PF12627 Probable RNA and SrmB- binding site of polymerase A N4T41_12555 PF01743 Poly A polymerase head domain N4T41_12565 PF03819 MazG nucleotide pyrophosphohydrolase domain N4T41_12575 PF02824 TGS domain N4T41_12575 PF04607 Region found in RelA / SpoT proteins N4T41_12575 PF13291 ACT domain N4T41_12580 PF05958 tRNA (Uracil-5-)-methyltransferase N4T41_12590 PF00291 Pyridoxal-phosphate dependent enzyme N4T41_12595 PF00512 His Kinase A (phospho-acceptor) domain N4T41_12595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N4T41_12595 PF00072 Response regulator receiver domain N4T41_12595 PF01627 Hpt domain N4T41_12595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_12595 PF00672 HAMP domain N4T41_12600 PF00378 Enoyl-CoA hydratase/isomerase N4T41_12605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N4T41_12605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N4T41_12610 PF01261 Xylose isomerase-like TIM barrel N4T41_12620 PF00106 short chain dehydrogenase N4T41_12625 PF02233 NAD(P) transhydrogenase beta subunit N4T41_12630 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch N4T41_12635 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N4T41_12635 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N4T41_12640 PF00892 EamA-like transporter family N4T41_12650 PF07690 Major Facilitator Superfamily N4T41_12655 PF01207 Dihydrouridine synthase (Dus) N4T41_12665 PF03466 LysR substrate binding domain N4T41_12665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_12675 PF00899 ThiF family N4T41_12685 PF00330 Aconitase family (aconitate hydratase) N4T41_12685 PF00694 Aconitase C-terminal domain N4T41_12690 PF01026 TatD related DNase N4T41_12705 PF03144 Elongation factor Tu domain 2 N4T41_12705 PF00009 Elongation factor Tu GTP binding domain N4T41_12705 PF16658 Class II release factor RF3, C-terminal domain N4T41_12715 PF13936 Helix-turn-helix domain N4T41_12715 PF00665 Integrase core domain N4T41_12720 PF01636 Phosphotransferase enzyme family N4T41_12725 PF00665 Integrase core domain N4T41_12725 PF13936 Helix-turn-helix domain N4T41_12740 PF00563 EAL domain N4T41_12740 PF00990 Diguanylate cyclase, GGDEF domain N4T41_12740 PF03707 Bacterial signalling protein N terminal repeat N4T41_12745 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N4T41_12745 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N4T41_12750 PF10369 Small subunit of acetolactate synthase N4T41_12755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4T41_12755 PF00205 Thiamine pyrophosphate enzyme, central domain N4T41_12755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4T41_12765 PF09334 tRNA synthetases class I (M) N4T41_12765 PF08264 Anticodon-binding domain of tRNA N4T41_12765 PF00133 tRNA synthetases class I (I, L, M and V) N4T41_12765 PF13603 Leucyl-tRNA synthetase, Domain 2 N4T41_12780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T41_12785 PF02687 FtsX-like permease family N4T41_12785 PF12704 MacB-like periplasmic core domain N4T41_12785 PF00005 ABC transporter N4T41_12790 PF02321 Outer membrane efflux protein N4T41_12805 PF00929 Exonuclease N4T41_12810 PF03193 RsgA GTPase N4T41_12820 PF00462 Glutaredoxin N4T41_12825 PF02556 Preprotein translocase subunit SecB N4T41_12835 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N4T41_12835 PF01926 50S ribosome-binding GTPase N4T41_12840 PF13360 PQQ-like domain N4T41_12850 PF13393 Histidyl-tRNA synthetase N4T41_12850 PF03129 Anticodon binding domain N4T41_12855 PF04551 GcpE protein N4T41_12860 PF13464 Domain of unknown function (DUF4115) N4T41_12870 PF04055 Radical SAM superfamily N4T41_12875 PF00334 Nucleoside diphosphate kinase N4T41_12880 PF04384 Iron-sulphur cluster assembly N4T41_12885 PF01569 PAP2 superfamily N4T41_12890 PF13439 Glycosyltransferase Family 4 N4T41_12890 PF00534 Glycosyl transferases group 1 N4T41_12895 PF00595 PDZ domain N4T41_12895 PF11818 C-terminal domain of tail specific protease (DUF3340) N4T41_12895 PF03572 Peptidase family S41 N4T41_12895 PF17804 Tail specific protease N-terminal domain N4T41_12900 PF00933 Glycosyl hydrolase family 3 N terminal domain N4T41_12910 PF00561 alpha/beta hydrolase fold N4T41_12915 PF00171 Aldehyde dehydrogenase family N4T41_12920 PF00171 Aldehyde dehydrogenase family N4T41_12925 PF01202 Shikimate kinase N4T41_12930 PF02447 GntP family permease N4T41_12935 PF01081 KDPG and KHG aldolase N4T41_12940 PF00920 Dehydratase family N4T41_12945 PF00871 Acetokinase family N4T41_12950 PF07085 DRTGG domain N4T41_12950 PF01515 Phosphate acetyl/butaryl transferase N4T41_12955 PF05681 Fumarate hydratase (Fumerase) N4T41_12955 PF05683 Fumarase C-terminus N4T41_12970 PF10431 C-terminal, D2-small domain, of ClpB protein N4T41_12970 PF07724 AAA domain (Cdc48 subfamily) N4T41_12970 PF06689 ClpX C4-type zinc finger N4T41_12975 PF00574 Clp protease N4T41_12980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T41_12980 PF05698 Bacterial trigger factor protein (TF) C-terminus N4T41_12980 PF05697 Bacterial trigger factor protein (TF) N4T41_12985 PF07715 TonB-dependent Receptor Plug Domain N4T41_12985 PF00593 TonB dependent receptor N4T41_12990 PF13640 2OG-Fe(II) oxygenase superfamily N4T41_12990 PF18331 PKHD-type hydroxylase C-terminal domain N4T41_12995 PF00682 HMGL-like N4T41_12995 PF08502 LeuA allosteric (dimerisation) domain N4T41_13000 PF00561 alpha/beta hydrolase fold N4T41_13005 PF00561 alpha/beta hydrolase fold N4T41_13005 PF07021 Methionine biosynthesis protein MetW N4T41_13015 PF01725 Ham1 family N4T41_13025 PF02416 mttA/Hcf106 family N4T41_13030 PF02416 mttA/Hcf106 family N4T41_13035 PF00902 Sec-independent protein translocase protein (TatC) N4T41_13055 PF01790 Prolipoprotein diacylglyceryl transferase N4T41_13070 PF00303 Thymidylate synthase N4T41_13075 PF00186 Dihydrofolate reductase N4T41_13085 PF01625 Peptide methionine sulfoxide reductase N4T41_13095 PF01618 MotA/TolQ/ExbB proton channel family N4T41_13105 PF00551 Formyl transferase N4T41_13105 PF01842 ACT domain N4T41_13115 PF00171 Aldehyde dehydrogenase family N4T41_13120 PF00830 Ribosomal L28 family N4T41_13125 PF00471 Ribosomal protein L33 N4T41_13130 PF00999 Sodium/hydrogen exchanger family N4T41_13130 PF02254 TrkA-N domain N4T41_13150 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) N4T41_13155 PF00580 UvrD/REP helicase N-terminal domain N4T41_13155 PF13361 UvrD-like helicase C-terminal domain N4T41_13170 PF01396 Topoisomerase DNA binding C4 zinc finger N4T41_13170 PF08272 Topoisomerase I zinc-ribbon-like N4T41_13170 PF01131 DNA topoisomerase N4T41_13170 PF01751 Toprim domain N4T41_13180 PF01638 HxlR-like helix-turn-helix N4T41_13185 PF00107 Zinc-binding dehydrogenase N4T41_13185 PF08240 Alcohol dehydrogenase GroES-like domain N4T41_13190 PF04102 SlyX N4T41_13195 PF00005 ABC transporter N4T41_13195 PF16326 ABC transporter C-terminal domain N4T41_13195 PF12848 ABC transporter N4T41_13200 PF01810 LysE type translocator N4T41_13205 PF03279 Bacterial lipid A biosynthesis acyltransferase N4T41_13215 PF00375 Sodium:dicarboxylate symporter family N4T41_13225 PF01118 Semialdehyde dehydrogenase, NAD binding domain N4T41_13225 PF02774 Semialdehyde dehydrogenase, dimerisation domain N4T41_13245 PF01416 tRNA pseudouridine synthase N4T41_13255 PF01176 Translation initiation factor 1A / IF-1 N4T41_13270 PF00180 Isocitrate/isopropylmalate dehydrogenase N4T41_13280 PF00694 Aconitase C-terminal domain N4T41_13285 PF00330 Aconitase family (aconitate hydratase) N4T41_13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_13295 PF03466 LysR substrate binding domain N4T41_13315 PF00293 NUDIX domain N4T41_13320 PF01590 GAF domain N4T41_13320 PF05524 PEP-utilising enzyme, N-terminal N4T41_13320 PF02896 PEP-utilising enzyme, TIM barrel domain N4T41_13320 PF00391 PEP-utilising enzyme, mobile domain N4T41_13325 PF00141 Peroxidase N4T41_13330 PF12706 Beta-lactamase superfamily domain N4T41_13335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_13335 PF03466 LysR substrate binding domain N4T41_13345 PF02798 Glutathione S-transferase, N-terminal domain N4T41_13350 PF13280 WYL domain N4T41_13350 PF08279 HTH domain N4T41_13355 PF13419 Haloacid dehalogenase-like hydrolase N4T41_13360 PF00849 RNA pseudouridylate synthase N4T41_13360 PF01479 S4 domain N4T41_13365 PF12111 Polyribonucleotide phosphorylase C terminal N4T41_13365 PF10150 Ribonuclease E/G family N4T41_13365 PF00575 S1 RNA binding domain N4T41_13370 PF00501 AMP-binding enzyme N4T41_13370 PF13193 AMP-binding enzyme C-terminal domain N4T41_13385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_13385 PF03466 LysR substrate binding domain N4T41_13395 PF06969 HemN C-terminal domain N4T41_13395 PF04055 Radical SAM superfamily N4T41_13405 PF01554 MatE N4T41_13410 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T41_13410 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_13410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_13415 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N4T41_13415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_13420 PF03109 ABC1 family N4T41_13425 PF01197 Ribosomal protein L31 N4T41_13440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N4T41_13450 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N4T41_13450 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_13450 PF13247 4Fe-4S dicluster domain N4T41_13460 PF03884 DNA gyrase inhibitor YacG N4T41_13465 PF00753 Metallo-beta-lactamase superfamily N4T41_13470 PF00762 Ferrochelatase N4T41_13480 PF01177 Asp/Glu/Hydantoin racemase N4T41_13495 PF01206 Sulfurtransferase TusA N4T41_13500 PF03471 Transporter associated domain N4T41_13500 PF00571 CBS domain N4T41_13505 PF00795 Carbon-nitrogen hydrolase N4T41_13510 PF01588 Putative tRNA binding domain N4T41_13520 PF07963 Prokaryotic N-terminal methylation motif N4T41_13520 PF08334 Type II secretion system (T2SS), protein G N4T41_13525 PF00482 Type II secretion system (T2SS), protein F N4T41_13530 PF18074 Primosomal protein N C-terminal domain N4T41_13530 PF18319 PriA DNA helicase Cys-rich region (CRR) domain N4T41_13530 PF00271 Helicase conserved C-terminal domain N4T41_13530 PF17764 3′ DNA-binding domain (3′BD) N4T41_13530 PF00270 DEAD/DEAH box helicase N4T41_13535 PF00999 Sodium/hydrogen exchanger family N4T41_13535 PF02254 TrkA-N domain N4T41_13540 PF01430 Hsp33 protein N4T41_13550 PF00226 DnaJ domain N4T41_13550 PF01556 DnaJ C terminal domain N4T41_13560 PF01544 CorA-like Mg2+ transporter protein N4T41_13565 PF00575 S1 RNA binding domain N4T41_13565 PF03725 3' exoribonuclease family, domain 2 N4T41_13565 PF01138 3' exoribonuclease family, domain 1 N4T41_13565 PF00013 KH domain N4T41_13565 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N4T41_13570 PF00312 Ribosomal protein S15 N4T41_13575 PF00144 Beta-lactamase N4T41_13580 PF13538 UvrD-like helicase C-terminal domain N4T41_13585 PF13361 UvrD-like helicase C-terminal domain N4T41_13585 PF12705 PD-(D/E)XK nuclease superfamily N4T41_13585 PF00580 UvrD/REP helicase N-terminal domain N4T41_13590 PF17946 RecC C-terminal domain N4T41_13600 PF03976 Polyphosphate kinase 2 (PPK2) N4T41_13610 PF01209 ubiE/COQ5 methyltransferase family N4T41_13620 PF03109 ABC1 family N4T41_13625 PF01494 FAD binding domain N4T41_13630 PF01502 Phosphoribosyl-AMP cyclohydrolase N4T41_13645 PF13244 Domain of unknown function (DUF4040) N4T41_13645 PF00361 Proton-conducting membrane transporter N4T41_13645 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N4T41_13645 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter N4T41_13650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L N4T41_13655 PF00361 Proton-conducting membrane transporter N4T41_13660 PF01899 Na+/H+ ion antiporter subunit N4T41_13665 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) N4T41_13670 PF03334 Na+/H+ antiporter subunit N4T41_13675 PF02033 Ribosome-binding factor A N4T41_13680 PF04760 Translation initiation factor IF-2, N-terminal region N4T41_13680 PF00009 Elongation factor Tu GTP binding domain N4T41_13680 PF11987 Translation-initiation factor 2 N4T41_13680 PF08364 Bacterial translation initiation factor IF-2 associated region N4T41_13685 PF00575 S1 RNA binding domain N4T41_13685 PF08529 NusA N-terminal domain N4T41_13685 PF13184 NusA-like KH domain N4T41_13690 PF02576 RimP N-terminal domain N4T41_13690 PF17384 RimP C-terminal SH3 domain N4T41_13710 PF03840 Preprotein translocase SecG subunit N4T41_13715 PF00121 Triosephosphate isomerase N4T41_13720 PF00437 Type II/IV secretion system protein N4T41_13720 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N4T41_13725 PF00482 Type II secretion system (T2SS), protein F N4T41_13730 PF01478 Type IV leader peptidase family N4T41_13730 PF06750 Bacterial Peptidase A24 N-terminal domain N4T41_13735 PF01121 Dephospho-CoA kinase N4T41_13745 PF08032 RNA 2'-O ribose methyltransferase substrate binding N4T41_13745 PF00588 SpoU rRNA Methylase family N4T41_13750 PF06865 Pyrimidine/purine nucleoside phosphorylase N4T41_13760 PF02463 RecF/RecN/SMC N terminal domain N4T41_13765 PF02622 Uncharacterized ACR, COG1678 N4T41_13770 PF03652 Holliday junction resolvase N4T41_13775 PF13533 Biotin-lipoyl like N4T41_13800 PF02805 Metal binding domain of Ada N4T41_13800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N4T41_13800 PF12833 Helix-turn-helix domain N4T41_13800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N4T41_13805 PF01066 CDP-alcohol phosphatidyltransferase N4T41_13815 PF01541 GIY-YIG catalytic domain N4T41_13815 PF02151 UvrB/uvrC motif N4T41_13815 PF08459 UvrC Helix-hairpin-helix N-terminal N4T41_13845 PF00378 Enoyl-CoA hydratase/isomerase N4T41_13845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T41_13845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T41_13850 PF02803 Thiolase, C-terminal domain N4T41_13850 PF00108 Thiolase, N-terminal domain N4T41_13865 PF09278 MerR, DNA binding N4T41_13865 PF00376 MerR family regulatory protein N4T41_13875 PF01323 DSBA-like thioredoxin domain N4T41_13890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_13890 PF00183 Hsp90 protein N4T41_13905 PF13726 Na+-H+ antiporter family N4T41_13905 PF03553 Na+/H+ antiporter family N4T41_13910 PF00561 alpha/beta hydrolase fold N4T41_13920 PF13737 Transposase DDE domain N4T41_13935 PF05000 RNA polymerase Rpb1, domain 4 N4T41_13935 PF04997 RNA polymerase Rpb1, domain 1 N4T41_13935 PF04998 RNA polymerase Rpb1, domain 5 N4T41_13935 PF00623 RNA polymerase Rpb1, domain 2 N4T41_13935 PF04983 RNA polymerase Rpb1, domain 3 N4T41_13940 PF04560 RNA polymerase Rpb2, domain 7 N4T41_13940 PF04563 RNA polymerase beta subunit N4T41_13940 PF00562 RNA polymerase Rpb2, domain 6 N4T41_13940 PF10385 RNA polymerase beta subunit external 1 domain N4T41_13940 PF04565 RNA polymerase Rpb2, domain 3 N4T41_13940 PF04561 RNA polymerase Rpb2, domain 2 N4T41_13945 PF16320 Ribosomal protein L7/L12 dimerisation domain N4T41_13945 PF00542 Ribosomal protein L7/L12 C-terminal domain N4T41_13950 PF00466 Ribosomal protein L10 N4T41_13955 PF00687 Ribosomal protein L1p/L10e family N4T41_13960 PF00298 Ribosomal protein L11, RNA binding domain N4T41_13960 PF03946 Ribosomal protein L11, N-terminal domain N4T41_13965 PF02357 Transcription termination factor nusG N4T41_13965 PF00467 KOW motif N4T41_13970 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N4T41_13980 PF03143 Elongation factor Tu C-terminal domain N4T41_13980 PF03144 Elongation factor Tu domain 2 N4T41_13980 PF00009 Elongation factor Tu GTP binding domain N4T41_14005 PF00425 chorismate binding enzyme N4T41_14005 PF04715 Anthranilate synthase component I, N terminal region N4T41_14010 PF13419 Haloacid dehalogenase-like hydrolase N4T41_14015 PF12401 Protein of unknown function (DUF2662) N4T41_14015 PF00498 FHA domain N4T41_14020 PF03958 Bacterial type II/III secretion system short domain N4T41_14020 PF00263 Bacterial type II and III secretion system protein N4T41_14035 PF00816 H-NS histone family N4T41_14060 PF03900 Porphobilinogen deaminase, C-terminal domain N4T41_14060 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N4T41_14065 PF00072 Response regulator receiver domain N4T41_14065 PF04397 LytTr DNA-binding domain N4T41_14070 PF06580 Histidine kinase N4T41_14070 PF07694 5TMR of 5TMR-LYT N4T41_14070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_14075 PF14698 Argininosuccinate lyase C-terminal N4T41_14075 PF00206 Lyase N4T41_14080 PF04362 Bacterial Fe(2+) trafficking N4T41_14085 PF01895 PhoU domain N4T41_14090 PF02321 Outer membrane efflux protein N4T41_14095 PF00892 EamA-like transporter family N4T41_14110 PF13667 ThiC-associated domain N4T41_14110 PF01964 Radical SAM ThiC family N4T41_14115 PF00293 NUDIX domain N4T41_14120 PF00149 Calcineurin-like phosphoesterase N4T41_14125 PF01258 Prokaryotic dksA/traR C4-type zinc finger N4T41_14130 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4T41_14135 PF01098 Cell cycle protein N4T41_14140 PF08245 Mur ligase middle domain N4T41_14140 PF02875 Mur ligase family, glutamate ligase domain N4T41_14150 PF07670 Nucleoside recognition N4T41_14150 PF02421 Ferrous iron transport protein B N4T41_14150 PF07664 Ferrous iron transport protein B C terminus N4T41_14160 PF02899 Phage integrase, N-terminal SAM-like domain N4T41_14160 PF00589 Phage integrase family N4T41_14165 PF10411 Disulfide bond isomerase protein N-terminus N4T41_14165 PF13098 Thioredoxin-like domain N4T41_14170 PF01842 ACT domain N4T41_14170 PF00742 Homoserine dehydrogenase N4T41_14170 PF03447 Homoserine dehydrogenase, NAD binding domain N4T41_14175 PF00291 Pyridoxal-phosphate dependent enzyme N4T41_14180 PF00768 D-alanyl-D-alanine carboxypeptidase N4T41_14185 PF00196 Bacterial regulatory proteins, luxR family N4T41_14185 PF00072 Response regulator receiver domain N4T41_14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_14190 PF00512 His Kinase A (phospho-acceptor) domain N4T41_14195 PF00158 Sigma-54 interaction domain N4T41_14195 PF02954 Bacterial regulatory protein, Fis family N4T41_14195 PF00072 Response regulator receiver domain N4T41_14200 PF00595 PDZ domain N4T41_14200 PF03572 Peptidase family S41 N4T41_14205 PF06415 BPG-independent PGAM N-terminus (iPGM_N) N4T41_14205 PF01676 Metalloenzyme superfamily N4T41_14210 PF03739 Lipopolysaccharide export system permease LptF/LptG N4T41_14220 PF00883 Cytosol aminopeptidase family, catalytic domain N4T41_14220 PF02789 Cytosol aminopeptidase family, N-terminal domain N4T41_14240 PF00677 Lumazine binding domain N4T41_14250 PF01872 RibD C-terminal domain N4T41_14250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N4T41_14255 PF03477 ATP cone domain N4T41_14260 PF00909 Ammonium Transporter Family N4T41_14265 PF00543 Nitrogen regulatory protein P-II N4T41_14285 PF00916 Sulfate permease family N4T41_14285 PF01740 STAS domain N4T41_14290 PF00582 Universal stress protein family N4T41_14320 PF00665 Integrase core domain N4T41_14335 PF00392 Bacterial regulatory proteins, gntR family N4T41_14335 PF00155 Aminotransferase class I and II N4T41_14345 PF00701 Dihydrodipicolinate synthetase family N4T41_14365 PF03573 outer membrane porin, OprD family N4T41_14370 PF00719 Inorganic pyrophosphatase N4T41_14385 PF00501 AMP-binding enzyme N4T41_14385 PF13193 AMP-binding enzyme C-terminal domain N4T41_14390 PF00521 DNA gyrase/topoisomerase IV, subunit A N4T41_14390 PF03989 DNA gyrase C-terminal domain, beta-propeller N4T41_14395 PF07690 Major Facilitator Superfamily N4T41_14400 PF03458 UPF0126 domain N4T41_14405 PF02810 SEC-C motif N4T41_14410 PF03471 Transporter associated domain N4T41_14410 PF03741 Integral membrane protein TerC family N4T41_14415 PF03641 Possible lysine decarboxylase N4T41_14420 PF07690 Major Facilitator Superfamily N4T41_14430 PF11798 IMS family HHH motif N4T41_14430 PF00817 impB/mucB/samB family N4T41_14430 PF11799 impB/mucB/samB family C-terminal domain N4T41_14450 PF08497 Radical SAM N-terminal N4T41_14450 PF04055 Radical SAM superfamily N4T41_14450 PF11842 Domain of unknown function (DUF3362) N4T41_14470 PF03358 NADPH-dependent FMN reductase N4T41_14480 PF00291 Pyridoxal-phosphate dependent enzyme N4T41_14540 PF01327 Polypeptide deformylase N4T41_14550 PF17782 DprA winged helix domain N4T41_14550 PF02481 DNA recombination-mediator protein A N4T41_14555 PF01300 Telomere recombination N4T41_14560 PF00892 EamA-like transporter family N4T41_14565 PF00440 Bacterial regulatory proteins, tetR family N4T41_14570 PF07690 Major Facilitator Superfamily N4T41_14580 PF00255 Glutathione peroxidase N4T41_14590 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N4T41_14595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4T41_14595 PF02874 ATP synthase alpha/beta family, beta-barrel domain N4T41_14600 PF00231 ATP synthase N4T41_14605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4T41_14605 PF00306 ATP synthase alpha/beta chain, C terminal domain N4T41_14605 PF02874 ATP synthase alpha/beta family, beta-barrel domain N4T41_14610 PF00213 ATP synthase delta (OSCP) subunit N4T41_14615 PF00430 ATP synthase B/B' CF(0) N4T41_14620 PF00137 ATP synthase subunit C N4T41_14625 PF00119 ATP synthase A chain N4T41_14645 PF00005 ABC transporter N4T41_14650 PF00950 ABC 3 transport family N4T41_14655 PF01810 LysE type translocator N4T41_14660 PF04261 Dyp-type peroxidase family N4T41_14670 PF03949 Malic enzyme, NAD binding domain N4T41_14670 PF00390 Malic enzyme, N-terminal domain N4T41_14675 PF03485 Arginyl tRNA synthetase N terminal domain N4T41_14675 PF05746 DALR anticodon binding domain N4T41_14675 PF00750 tRNA synthetases class I (R) N4T41_14695 PF05726 Pirin C-terminal cupin domain N4T41_14695 PF02678 Pirin N4T41_14705 PF03551 Transcriptional regulator PadR-like family N4T41_14710 PF13427 Domain of unknown function (DUF4111) N4T41_14710 PF01909 Nucleotidyltransferase domain N4T41_14715 PF00117 Glutamine amidotransferase class-I N4T41_14715 PF00958 GMP synthase C terminal domain N4T41_14715 PF02540 NAD synthase N4T41_14720 PF04286 Protein of unknown function (DUF445) N4T41_14725 PF07681 DoxX N4T41_14730 PF09335 SNARE associated Golgi protein N4T41_14745 PF13614 AAA domain N4T41_14755 PF01722 BolA-like protein N4T41_14770 PF01648 4'-phosphopantetheinyl transferase superfamily N4T41_14775 PF12697 Alpha/beta hydrolase family N4T41_14795 PF16197 Ketoacyl-synthetase C-terminal extension N4T41_14795 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T41_14795 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T41_14795 PF08242 Methyltransferase domain N4T41_14795 PF14765 Polyketide synthase dehydratase N4T41_14795 PF00550 Phosphopantetheine attachment site N4T41_14795 PF00975 Thioesterase domain N4T41_14800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_14800 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_14800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_14810 PF13936 Helix-turn-helix domain N4T41_14810 PF00665 Integrase core domain N4T41_14815 PF03472 Autoinducer binding domain N4T41_14815 PF00196 Bacterial regulatory proteins, luxR family N4T41_14825 PF00765 Autoinducer synthase N4T41_14830 PF07690 Major Facilitator Superfamily N4T41_14830 PF00083 Sugar (and other) transporter N4T41_14835 PF00378 Enoyl-CoA hydratase/isomerase N4T41_14840 PF00378 Enoyl-CoA hydratase/isomerase N4T41_14845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_14845 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_14845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_14850 PF00501 AMP-binding enzyme N4T41_14850 PF13193 AMP-binding enzyme C-terminal domain N4T41_14855 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N4T41_14855 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N4T41_14860 PF00171 Aldehyde dehydrogenase family N4T41_14870 PF00324 Amino acid permease N4T41_14875 PF00324 Amino acid permease N4T41_14880 PF01042 Endoribonuclease L-PSP N4T41_14885 PF00842 Alanine racemase, C-terminal domain N4T41_14885 PF01168 Alanine racemase, N-terminal domain N4T41_14890 PF01266 FAD dependent oxidoreductase N4T41_14895 PF01037 Lrp/AsnC ligand binding domain N4T41_14905 PF07715 TonB-dependent Receptor Plug Domain N4T41_14905 PF00593 TonB dependent receptor N4T41_14920 PF00849 RNA pseudouridylate synthase N4T41_14935 PF08361 MAATS-type transcriptional repressor, C-terminal region N4T41_14935 PF00440 Bacterial regulatory proteins, tetR family N4T41_14945 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T41_14945 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T41_14980 PF00330 Aconitase family (aconitate hydratase) N4T41_14980 PF00694 Aconitase C-terminal domain N4T41_14985 PF00285 Citrate synthase, C-terminal domain N4T41_14995 PF07729 FCD domain N4T41_14995 PF00392 Bacterial regulatory proteins, gntR family N4T41_15005 PF00155 Aminotransferase class I and II N4T41_15010 PF09330 D-lactate dehydrogenase, membrane binding N4T41_15010 PF01565 FAD binding domain N4T41_15015 PF01070 FMN-dependent dehydrogenase N4T41_15020 PF07729 FCD domain N4T41_15020 PF00392 Bacterial regulatory proteins, gntR family N4T41_15025 PF02652 L-lactate permease N4T41_15030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T41_15030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T41_15030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T41_15030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T41_15035 PF16363 GDP-mannose 4,6 dehydratase N4T41_15040 PF00342 Phosphoglucose isomerase N4T41_15045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N4T41_15045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N4T41_15045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N4T41_15050 PF00483 Nucleotidyl transferase N4T41_15055 PF02397 Bacterial sugar transferase N4T41_15060 PF00535 Glycosyl transferase family 2 N4T41_15090 PF08666 SAF domain N4T41_15090 PF03102 NeuB family N4T41_15105 PF02348 Cytidylyltransferase N4T41_15110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N4T41_15115 PF02719 Polysaccharide biosynthesis protein N4T41_15120 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N4T41_15120 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N4T41_15120 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N4T41_15125 PF18412 Outer-membrane lipoprotein Wza C-terminal domain N4T41_15125 PF02563 Polysaccharide biosynthesis/export protein N4T41_15125 PF10531 SLBB domain N4T41_15130 PF01451 Low molecular weight phosphotyrosine protein phosphatase N4T41_15135 PF13807 G-rich domain on putative tyrosine kinase N4T41_15135 PF02706 Chain length determinant protein N4T41_15135 PF13614 AAA domain N4T41_15140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T41_15140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N4T41_15145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T41_15145 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N4T41_15150 PF03023 Lipid II flippase MurJ N4T41_15155 PF01510 N-acetylmuramoyl-L-alanine amidase N4T41_15160 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain N4T41_15160 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain N4T41_15180 PF01138 3' exoribonuclease family, domain 1 N4T41_15180 PF03725 3' exoribonuclease family, domain 2 N4T41_15185 PF00487 Fatty acid desaturase N4T41_15190 PF00175 Oxidoreductase NAD-binding domain N4T41_15195 PF00440 Bacterial regulatory proteins, tetR family N4T41_15200 PF08360 QacR-like protein, C-terminal region N4T41_15200 PF00440 Bacterial regulatory proteins, tetR family N4T41_15205 PF01323 DSBA-like thioredoxin domain N4T41_15215 PF13419 Haloacid dehalogenase-like hydrolase N4T41_15220 PF00106 short chain dehydrogenase N4T41_15235 PF00696 Amino acid kinase family N4T41_15235 PF00583 Acetyltransferase (GNAT) family N4T41_15240 PF09084 NMT1/THI5 like N4T41_15245 PF09084 NMT1/THI5 like N4T41_15250 PF00296 Luciferase-like monooxygenase N4T41_15255 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_15260 PF00005 ABC transporter N4T41_15265 PF00440 Bacterial regulatory proteins, tetR family N4T41_15265 PF08362 YcdC-like protein, C-terminal region N4T41_15270 PF01048 Phosphorylase superfamily N4T41_15280 PF06574 FAD synthetase N4T41_15280 PF01687 Riboflavin kinase N4T41_15285 PF06827 Zinc finger found in FPG and IleRS N4T41_15285 PF00133 tRNA synthetases class I (I, L, M and V) N4T41_15285 PF08264 Anticodon-binding domain of tRNA N4T41_15290 PF01252 Signal peptidase (SPase) II N4T41_15295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T41_15335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N4T41_15340 PF07859 alpha/beta hydrolase fold N4T41_15360 PF03466 LysR substrate binding domain N4T41_15360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_15365 PF01025 GrpE N4T41_15370 PF00012 Hsp70 protein N4T41_15390 PF13406 Transglycosylase SLT domain N4T41_15395 PF02222 ATP-grasp domain N4T41_15395 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain N4T41_15400 PF00731 AIR carboxylase N4T41_15410 PF01225 Mur ligase family, catalytic domain N4T41_15410 PF02875 Mur ligase family, glutamate ligase domain N4T41_15410 PF08245 Mur ligase middle domain N4T41_15420 PF01569 PAP2 superfamily N4T41_15425 PF03741 Integral membrane protein TerC family N4T41_15435 PF03738 Glutathionylspermidine synthase preATP-grasp N4T41_15440 PF00355 Rieske [2Fe-2S] domain N4T41_15445 PF01979 Amidohydrolase family N4T41_15450 PF00156 Phosphoribosyl transferase domain N4T41_15460 PF10411 Disulfide bond isomerase protein N-terminus N4T41_15460 PF13098 Thioredoxin-like domain N4T41_15465 PF01545 Cation efflux family N4T41_15465 PF16916 Dimerisation domain of Zinc Transporter N4T41_15470 PF02583 Metal-sensitive transcriptional repressor N4T41_15475 PF10396 GTP-binding protein TrmE N-terminus N4T41_15475 PF01926 50S ribosome-binding GTPase N4T41_15475 PF12631 MnmE helical domain N4T41_15480 PF14849 YidC periplasmic domain N4T41_15480 PF02096 60Kd inner membrane protein N4T41_15485 PF01809 Putative membrane protein insertion efficiency factor N4T41_15490 PF00825 Ribonuclease P N4T41_15495 PF00468 Ribosomal protein L34 N4T41_15500 PF00308 Bacterial dnaA protein N4T41_15500 PF08299 Bacterial dnaA protein helix-turn-helix N4T41_15500 PF11638 DnaA N-terminal domain N4T41_15505 PF02768 DNA polymerase III beta subunit, C-terminal domain N4T41_15505 PF00712 DNA polymerase III beta subunit, N-terminal domain N4T41_15505 PF02767 DNA polymerase III beta subunit, central domain N4T41_15510 PF02463 RecF/RecN/SMC N terminal domain N4T41_15515 PF01751 Toprim domain N4T41_15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_15515 PF18053 DNA gyrase B subunit insert domain N4T41_15515 PF00986 DNA gyrase B subunit, carboxyl terminus N4T41_15515 PF00204 DNA gyrase B N4T41_15525 PF09335 SNARE associated Golgi protein N4T41_15530 PF00005 ABC transporter N4T41_15530 PF12848 ABC transporter N4T41_15550 PF01521 Iron-sulphur cluster biosynthesis N4T41_15555 PF00561 alpha/beta hydrolase fold N4T41_15560 PF03702 Anhydro-N-acetylmuramic acid kinase N4T41_15565 PF00579 tRNA synthetases class I (W and Y) N4T41_15605 PF00209 Sodium:neurotransmitter symporter family N4T41_15615 PF01029 NusB family N4T41_15615 PF01189 16S rRNA methyltransferase RsmB/F N4T41_15620 PF00551 Formyl transferase N4T41_15620 PF02911 Formyl transferase, C-terminal domain N4T41_15625 PF00920 Dehydratase family N4T41_15640 PF03466 LysR substrate binding domain N4T41_15640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_15645 PF00860 Permease family N4T41_15650 PF00311 Phosphoenolpyruvate carboxylase N4T41_15655 PF08361 MAATS-type transcriptional repressor, C-terminal region N4T41_15655 PF00440 Bacterial regulatory proteins, tetR family N4T41_15660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T41_15665 PF00873 AcrB/AcrD/AcrF family N4T41_15675 PF00684 DnaJ central domain N4T41_15675 PF00226 DnaJ domain N4T41_15675 PF01556 DnaJ C terminal domain N4T41_15685 PF05173 Dihydrodipicolinate reductase, C-terminus N4T41_15685 PF01113 Dihydrodipicolinate reductase, N-terminus N4T41_15695 PF07690 Major Facilitator Superfamily N4T41_15700 PF00248 Aldo/keto reductase family N4T41_15705 PF03466 LysR substrate binding domain N4T41_15705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_15720 PF00155 Aminotransferase class I and II N4T41_15720 PF00392 Bacterial regulatory proteins, gntR family N4T41_15725 PF08240 Alcohol dehydrogenase GroES-like domain N4T41_15725 PF00107 Zinc-binding dehydrogenase N4T41_15730 PF03352 Methyladenine glycosylase N4T41_15745 PF00730 HhH-GPD superfamily base excision DNA repair protein N4T41_15745 PF00633 Helix-hairpin-helix motif N4T41_15745 PF10576 Iron-sulfur binding domain of endonuclease III N4T41_15745 PF14815 NUDIX domain N4T41_15760 PF07043 Protein of unknown function (DUF1328) N4T41_15765 PF03692 Putative zinc- or iron-chelating domain N4T41_15770 PF13610 DDE domain N4T41_15780 PF00857 Isochorismatase family N4T41_15785 PF00701 Dihydrodipicolinate synthetase family N4T41_15795 PF01259 SAICAR synthetase N4T41_15805 PF01226 Formate/nitrite transporter N4T41_15810 PF12002 MgsA AAA+ ATPase C terminal N4T41_15810 PF16193 AAA C-terminal domain N4T41_15810 PF00004 ATPase family associated with various cellular activities (AAA) N4T41_15820 PF13610 DDE domain N4T41_15830 PF10706 Aminoglycoside-2''-adenylyltransferase N4T41_15835 PF13427 Domain of unknown function (DUF4111) N4T41_15835 PF01909 Nucleotidyltransferase domain N4T41_15845 PF00905 Penicillin binding protein transpeptidase domain N4T41_15855 PF00893 Small Multidrug Resistance protein N4T41_15860 PF00809 Pterin binding enzyme N4T41_15870 PF01695 IstB-like ATP binding protein N4T41_15875 PF00665 Integrase core domain N4T41_15880 PF01527 Transposase N4T41_15880 PF00665 Integrase core domain N4T41_15880 PF13333 Integrase core domain N4T41_15880 PF13276 HTH-like domain N4T41_15895 PF13610 DDE domain N4T41_15905 PF01554 MatE N4T41_15910 PF04463 Protein of unknown function (DUF523) N4T41_15915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T41_15925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T41_15930 PF14497 Glutathione S-transferase, C-terminal domain N4T41_15930 PF02798 Glutathione S-transferase, N-terminal domain N4T41_15940 PF00324 Amino acid permease N4T41_15950 PF02492 CobW/HypB/UreG, nucleotide-binding domain N4T41_15950 PF07683 Cobalamin synthesis protein cobW C-terminal domain N4T41_15960 PF00392 Bacterial regulatory proteins, gntR family N4T41_15960 PF07702 UTRA domain N4T41_15965 PF05962 HutD N4T41_15970 PF01175 Urocanase Rossmann-like domain N4T41_15970 PF17391 Urocanase N-terminal domain N4T41_15970 PF17392 Urocanase C-terminal domain N4T41_15975 PF00221 Aromatic amino acid lyase N4T41_15985 PF01979 Amidohydrolase family N4T41_15990 PF00491 Arginase family N4T41_16005 PF01177 Asp/Glu/Hydantoin racemase N4T41_16010 PF01380 SIS domain N4T41_16015 PF12804 MobA-like NTP transferase domain N4T41_16015 PF14602 Hexapeptide repeat of succinyl-transferase N4T41_16015 PF00132 Bacterial transferase hexapeptide (six repeats) N4T41_16020 PF04608 Phosphatidylglycerophosphatase A N4T41_16025 PF02769 AIR synthase related protein, C-terminal domain N4T41_16025 PF00586 AIR synthase related protein, N-terminal domain N4T41_16030 PF01029 NusB family N4T41_16035 PF00885 6,7-dimethyl-8-ribityllumazine synthase N4T41_16040 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N4T41_16040 PF00925 GTP cyclohydrolase II N4T41_16065 PF02580 D-Tyr-tRNA(Tyr) deacylase N4T41_16070 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family N4T41_16070 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain N4T41_16075 PF00581 Rhodanese-like domain N4T41_16080 PF02666 Phosphatidylserine decarboxylase N4T41_16090 PF00989 PAS fold N4T41_16090 PF11808 Phosphate regulon sensor protein PhoR N4T41_16090 PF00512 His Kinase A (phospho-acceptor) domain N4T41_16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_16095 PF00486 Transcriptional regulatory protein, C terminal N4T41_16095 PF00072 Response regulator receiver domain N4T41_16105 PF00106 short chain dehydrogenase N4T41_16110 PF01554 MatE N4T41_16115 PF00155 Aminotransferase class I and II N4T41_16120 PF04286 Protein of unknown function (DUF445) N4T41_16135 PF04262 Glutamate-cysteine ligase N4T41_16140 PF02600 Disulfide bond formation protein DsbB N4T41_16145 PF13296 Putative type VI secretion system Rhs element Vgr N4T41_16145 PF04717 Type VI secretion system, phage-baseplate injector N4T41_16145 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) N4T41_16180 PF05728 Uncharacterised protein family (UPF0227) N4T41_16185 PF01751 Toprim domain N4T41_16185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_16185 PF00204 DNA gyrase B N4T41_16185 PF00986 DNA gyrase B subunit, carboxyl terminus N4T41_16190 PF04115 Ureidoglycolate lyase N4T41_16195 PF03561 Allantoicase repeat N4T41_16200 PF01494 FAD binding domain N4T41_16210 PF00860 Permease family N4T41_16215 PF00576 HIUase/Transthyretin family N4T41_16245 PF11412 Disulphide bond corrector protein DsbC N4T41_16245 PF02683 Cytochrome C biogenesis protein transmembrane region N4T41_16250 PF07694 5TMR of 5TMR-LYT N4T41_16250 PF00990 Diguanylate cyclase, GGDEF domain N4T41_16255 PF07859 alpha/beta hydrolase fold N4T41_16265 PF03960 ArsC family N4T41_16270 PF03372 Endonuclease/Exonuclease/phosphatase family N4T41_16275 PF00156 Phosphoribosyl transferase domain N4T41_16285 PF02463 RecF/RecN/SMC N terminal domain N4T41_16290 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) N4T41_16295 PF07715 TonB-dependent Receptor Plug Domain N4T41_16295 PF00593 TonB dependent receptor N4T41_16305 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain N4T41_16305 PF02951 Prokaryotic glutathione synthetase, N-terminal domain N4T41_16310 PF04101 Glycosyltransferase family 28 C-terminal domain N4T41_16310 PF03033 Glycosyltransferase family 28 N-terminal domain N4T41_16315 PF01225 Mur ligase family, catalytic domain N4T41_16315 PF02875 Mur ligase family, glutamate ligase domain N4T41_16315 PF08245 Mur ligase middle domain N4T41_16320 PF01820 D-ala D-ala ligase N-terminus N4T41_16320 PF07478 D-ala D-ala ligase C-terminus N4T41_16325 PF08478 POTRA domain, FtsQ-type N4T41_16325 PF03799 Cell division protein FtsQ N4T41_16330 PF02491 SHS2 domain inserted in FTSA N4T41_16335 PF12327 FtsZ family, C-terminal domain N4T41_16335 PF00091 Tubulin/FtsZ family, GTPase domain N4T41_16340 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase N4T41_16350 PF01551 Peptidase family M23 N4T41_16355 PF17831 Pyruvate dehydrogenase E1 component middle domain N4T41_16355 PF00456 Transketolase, thiamine diphosphate binding domain N4T41_16360 PF00364 Biotin-requiring enzyme N4T41_16360 PF02817 e3 binding domain N4T41_16360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N4T41_16370 PF01169 Uncharacterized protein family UPF0016 N4T41_16375 PF00593 TonB dependent receptor N4T41_16375 PF07715 TonB-dependent Receptor Plug Domain N4T41_16380 PF01613 Flavin reductase like domain N4T41_16380 PF00258 Flavodoxin N4T41_16385 PF03692 Putative zinc- or iron-chelating domain N4T41_16390 PF00571 CBS domain N4T41_16390 PF00478 IMP dehydrogenase / GMP reductase domain N4T41_16395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T41_16395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T41_16395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T41_16395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T41_16400 PF01243 Pyridoxamine 5'-phosphate oxidase N4T41_16400 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region N4T41_16405 PF17768 RecJ OB domain N4T41_16405 PF01368 DHH family N4T41_16405 PF02272 DHHA1 domain N4T41_16425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T41_16430 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) N4T41_16435 PF04452 RNA methyltransferase N4T41_16440 PF00924 Mechanosensitive ion channel N4T41_16450 PF16177 Acetyl-coenzyme A synthetase N-terminus N4T41_16450 PF00501 AMP-binding enzyme N4T41_16450 PF13193 AMP-binding enzyme C-terminal domain N4T41_16455 PF00857 Isochorismatase family N4T41_16460 PF01037 Lrp/AsnC ligand binding domain N4T41_16465 PF00296 Luciferase-like monooxygenase N4T41_16470 PF03358 NADPH-dependent FMN reductase N4T41_16475 PF00196 Bacterial regulatory proteins, luxR family N4T41_16475 PF00072 Response regulator receiver domain N4T41_16485 PF00072 Response regulator receiver domain N4T41_16485 PF01627 Hpt domain N4T41_16485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_16485 PF00512 His Kinase A (phospho-acceptor) domain N4T41_16485 PF00672 HAMP domain N4T41_16490 PF04341 Protein of unknown function, DUF485 N4T41_16495 PF00474 Sodium:solute symporter family N4T41_16515 PF00990 Diguanylate cyclase, GGDEF domain N4T41_16520 PF00005 ABC transporter N4T41_16520 PF17755 UvrA DNA-binding domain N4T41_16520 PF17760 UvrA interaction domain N4T41_16525 PF00440 Bacterial regulatory proteins, tetR family N4T41_16525 PF16925 Tetracyclin repressor-like, C-terminal domain N4T41_16530 PF08240 Alcohol dehydrogenase GroES-like domain N4T41_16530 PF00107 Zinc-binding dehydrogenase N4T41_16540 PF06942 GlpM protein N4T41_16545 PF02581 Thiamine monophosphate synthase N4T41_16545 PF08543 Phosphomethylpyrimidine kinase N4T41_16545 PF03070 TENA/THI-4/PQQC family N4T41_16555 PF07690 Major Facilitator Superfamily N4T41_16560 PF00436 Single-strand binding protein family N4T41_16570 PF03591 AzlC protein N4T41_16580 PF00324 Amino acid permease N4T41_16585 PF00155 Aminotransferase class I and II N4T41_16585 PF00392 Bacterial regulatory proteins, gntR family N4T41_16590 PF00202 Aminotransferase class-III N4T41_16595 PF00171 Aldehyde dehydrogenase family N4T41_16600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_16605 PF00857 Isochorismatase family N4T41_16610 PF02678 Pirin N4T41_16610 PF05726 Pirin C-terminal cupin domain N4T41_16615 PF01593 Flavin containing amine oxidoreductase N4T41_16630 PF12833 Helix-turn-helix domain N4T41_16630 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term N4T41_16635 PF13737 Transposase DDE domain N4T41_16640 PF17853 GGDEF-like domain N4T41_16640 PF06018 CodY GAF-like domain N4T41_16640 PF13556 PucR C-terminal helix-turn-helix domain N4T41_16655 PF00171 Aldehyde dehydrogenase family N4T41_16670 PF03050 Transposase IS66 family N4T41_16670 PF13817 IS66 C-terminal element N4T41_16670 PF13007 Transposase C of IS166 homeodomain N4T41_16670 PF13005 zinc-finger binding domain of transposase IS66 N4T41_16675 PF00324 Amino acid permease N4T41_16685 PF07690 Major Facilitator Superfamily N4T41_16690 PF03466 LysR substrate binding domain N4T41_16690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_16710 PF00248 Aldo/keto reductase family N4T41_16715 PF02311 AraC-like ligand binding domain N4T41_16715 PF12833 Helix-turn-helix domain N4T41_16745 PF01638 HxlR-like helix-turn-helix N4T41_16750 PF02525 Flavodoxin-like fold N4T41_16770 PF02705 K+ potassium transporter N4T41_16795 PF00230 Major intrinsic protein N4T41_16810 PF00977 Histidine biosynthesis protein N4T41_16815 PF01636 Phosphotransferase enzyme family N4T41_16830 PF03992 Antibiotic biosynthesis monooxygenase N4T41_16845 PF00977 Histidine biosynthesis protein N4T41_16860 PF00117 Glutamine amidotransferase class-I N4T41_16865 PF00475 Imidazoleglycerol-phosphate dehydratase N4T41_16885 PF00583 Acetyltransferase (GNAT) family N4T41_16890 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain N4T41_16890 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain N4T41_16900 PF00672 HAMP domain N4T41_16900 PF00512 His Kinase A (phospho-acceptor) domain N4T41_16900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_16905 PF00072 Response regulator receiver domain N4T41_16905 PF00486 Transcriptional regulatory protein, C terminal N4T41_16910 PF17674 HHH domain N4T41_16910 PF16921 Tex protein YqgF-like domain N4T41_16910 PF09371 Tex-like protein N-terminal domain N4T41_16910 PF00575 S1 RNA binding domain N4T41_16915 PF01740 STAS domain N4T41_16915 PF00916 Sulfate permease family N4T41_16920 PF00106 short chain dehydrogenase N4T41_16925 PF01053 Cys/Met metabolism PLP-dependent enzyme N4T41_16930 PF12848 ABC transporter N4T41_16930 PF00005 ABC transporter N4T41_16955 PF00529 HlyD membrane-fusion protein of T1SS N4T41_16955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4T41_16960 PF00873 AcrB/AcrD/AcrF family N4T41_16965 PF01545 Cation efflux family N4T41_16995 PF00324 Amino acid permease N4T41_17010 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4T41_17025 PF01795 MraW methylase family N4T41_17035 PF00905 Penicillin binding protein transpeptidase domain N4T41_17035 PF03717 Penicillin-binding Protein dimerisation domain N4T41_17040 PF02875 Mur ligase family, glutamate ligase domain N4T41_17040 PF01225 Mur ligase family, catalytic domain N4T41_17040 PF08245 Mur ligase middle domain N4T41_17045 PF01225 Mur ligase family, catalytic domain N4T41_17045 PF02875 Mur ligase family, glutamate ligase domain N4T41_17045 PF08245 Mur ligase middle domain N4T41_17050 PF00953 Glycosyl transferase family 4 N4T41_17060 PF13847 Methyltransferase domain N4T41_17065 PF17092 Penicillin-binding protein OB-like domain N4T41_17065 PF00912 Transglycosylase N4T41_17065 PF00905 Penicillin binding protein transpeptidase domain N4T41_17070 PF11104 Type IV pilus assembly protein PilM; N4T41_17075 PF05137 Fimbrial assembly protein (PilN) N4T41_17080 PF04350 Pilus assembly protein, PilO N4T41_17090 PF07660 Secretin and TonB N terminus short domain N4T41_17090 PF03958 Bacterial type II/III secretion system short domain N4T41_17090 PF11741 AMIN domain N4T41_17090 PF00263 Bacterial type II and III secretion system protein N4T41_17100 PF01761 3-dehydroquinate synthase N4T41_17110 PF01645 Conserved region in glutamate synthase N4T41_17110 PF04898 Glutamate synthase central domain N4T41_17110 PF00310 Glutamine amidotransferases class-II N4T41_17110 PF01493 GXGXG motif N4T41_17115 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N4T41_17115 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_17125 PF04011 LemA family N4T41_17130 PF04536 TPM domain N4T41_17140 PF07963 Prokaryotic N-terminal methylation motif N4T41_17140 PF00114 Pilin (bacterial filament) N4T41_17150 PF15864 Protein glycosylation ligase N4T41_17150 PF04932 O-Antigen ligase N4T41_17150 PF11846 Virulence factor membrane-bound polymerase, C-terminal N4T41_17155 PF00210 Ferritin-like domain N4T41_17160 PF04324 BFD-like [2Fe-2S] binding domain N4T41_17165 PF01042 Endoribonuclease L-PSP N4T41_17170 PF13291 ACT domain N4T41_17170 PF02824 TGS domain N4T41_17170 PF04607 Region found in RelA / SpoT proteins N4T41_17180 PF01192 RNA polymerase Rpb6 N4T41_17185 PF00625 Guanylate kinase N4T41_17190 PF02401 LytB protein N4T41_17230 PF00886 Ribosomal protein S16 N4T41_17235 PF05239 PRC-barrel domain N4T41_17235 PF01782 RimM N-terminal domain N4T41_17240 PF01746 tRNA (Guanine-1)-methyltransferase N4T41_17245 PF01245 Ribosomal protein L19 N4T41_17250 PF00561 alpha/beta hydrolase fold N4T41_17255 PF03280 Proteobacterial lipase chaperone protein N4T41_17260 PF01509 TruB family pseudouridylate synthase (N terminal domain) N4T41_17260 PF09157 Pseudouridine synthase II TruB, C-terminal N4T41_17260 PF16198 tRNA pseudouridylate synthase B C-terminal domain N4T41_17265 PF01925 Sulfite exporter TauE/SafE N4T41_17275 PF00892 EamA-like transporter family N4T41_17280 PF00892 EamA-like transporter family N4T41_17285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4T41_17285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4T41_17290 PF01565 FAD binding domain N4T41_17290 PF02913 FAD linked oxidases, C-terminal domain N4T41_17305 PF03992 Antibiotic biosynthesis monooxygenase N4T41_17310 PF02525 Flavodoxin-like fold N4T41_17335 PF13817 IS66 C-terminal element N4T41_17335 PF13007 Transposase C of IS166 homeodomain N4T41_17335 PF03050 Transposase IS66 family N4T41_17335 PF13005 zinc-finger binding domain of transposase IS66 N4T41_17345 PF12805 FUSC-like inner membrane protein yccS N4T41_17350 PF00080 Copper/zinc superoxide dismutase (SODC) N4T41_17355 PF01594 AI-2E family transporter N4T41_17360 PF13614 AAA domain N4T41_17380 PF08241 Methyltransferase domain N4T41_17390 PF00324 Amino acid permease N4T41_17395 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain N4T41_17395 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase N4T41_17400 PF00202 Aminotransferase class-III N4T41_17405 PF04958 Arginine N-succinyltransferase beta subunit N4T41_17410 PF00171 Aldehyde dehydrogenase family N4T41_17415 PF04996 Succinylarginine dihydrolase N4T41_17420 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family N4T41_17435 PF00082 Subtilase family N4T41_17435 PF05922 Peptidase inhibitor I9 N4T41_17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_17450 PF03466 LysR substrate binding domain N4T41_17470 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system N4T41_17475 PF05746 DALR anticodon binding domain N4T41_17475 PF02092 Glycyl-tRNA synthetase beta subunit N4T41_17480 PF02091 Glycyl-tRNA synthetase alpha subunit N4T41_17505 PF00571 CBS domain N4T41_17510 PF04024 PspC domain N4T41_17520 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T41_17520 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_17520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_17520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_17530 PF01488 Shikimate / quinate 5-dehydrogenase N4T41_17530 PF08501 Shikimate dehydrogenase substrate binding domain N4T41_17530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain N4T41_17535 PF01218 Coproporphyrinogen III oxidase N4T41_17540 PF00925 GTP cyclohydrolase II N4T41_17545 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N4T41_17545 PF02779 Transketolase, pyrimidine binding domain N4T41_17545 PF02780 Transketolase, C-terminal domain N4T41_17550 PF00459 Inositol monophosphatase family N4T41_17555 PF03880 DbpA RNA binding domain N4T41_17555 PF00270 DEAD/DEAH box helicase N4T41_17555 PF12343 Cold shock protein DEAD box A N4T41_17555 PF00271 Helicase conserved C-terminal domain N4T41_17565 PF00005 ABC transporter N4T41_17570 PF02405 Permease MlaE N4T41_17580 PF05494 MlaC protein N4T41_17590 PF01544 CorA-like Mg2+ transporter protein N4T41_17595 PF03641 Possible lysine decarboxylase N4T41_17600 PF00293 NUDIX domain N4T41_17605 PF00156 Phosphoribosyl transferase domain N4T41_17610 PF00270 DEAD/DEAH box helicase N4T41_17610 PF00271 Helicase conserved C-terminal domain N4T41_17610 PF17191 RecG wedge domain N4T41_17625 PF01553 Acyltransferase N4T41_17635 PF00375 Sodium:dicarboxylate symporter family N4T41_17645 PF01926 50S ribosome-binding GTPase N4T41_17650 PF02082 Transcriptional regulator N4T41_17655 PF00175 Oxidoreductase NAD-binding domain N4T41_17655 PF00042 Globin N4T41_17655 PF00970 Oxidoreductase FAD-binding domain N4T41_17665 PF05872 Bacterial protein of unknown function (DUF853) N4T41_17670 PF01053 Cys/Met metabolism PLP-dependent enzyme N4T41_17675 PF00117 Glutamine amidotransferase class-I N4T41_17680 PF00338 Ribosomal protein S10p/S20e N4T41_17685 PF00297 Ribosomal protein L3 N4T41_17690 PF00573 Ribosomal protein L4/L1 family N4T41_17695 PF00276 Ribosomal protein L23 N4T41_17700 PF00181 Ribosomal Proteins L2, RNA binding domain N4T41_17700 PF03947 Ribosomal Proteins L2, C-terminal domain N4T41_17705 PF00203 Ribosomal protein S19 N4T41_17710 PF00237 Ribosomal protein L22p/L17e N4T41_17720 PF00252 Ribosomal protein L16p/L10e N4T41_17725 PF00831 Ribosomal L29 protein N4T41_17730 PF00366 Ribosomal protein S17 N4T41_17735 PF00238 Ribosomal protein L14p/L23e N4T41_17740 PF00467 KOW motif N4T41_17740 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 N4T41_17745 PF00281 Ribosomal protein L5 N4T41_17745 PF00673 ribosomal L5P family C-terminus N4T41_17750 PF00253 Ribosomal protein S14p/S29e N4T41_17755 PF00410 Ribosomal protein S8 N4T41_17760 PF00347 Ribosomal protein L6 N4T41_17765 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast N4T41_17770 PF00333 Ribosomal protein S5, N-terminal domain N4T41_17770 PF03719 Ribosomal protein S5, C-terminal domain N4T41_17775 PF00327 Ribosomal protein L30p/L7e N4T41_17780 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A N4T41_17785 PF00344 SecY translocase N4T41_17790 PF00444 Ribosomal protein L36 N4T41_17795 PF00416 Ribosomal protein S13/S18 N4T41_17800 PF00411 Ribosomal protein S11 N4T41_17805 PF01479 S4 domain N4T41_17805 PF00163 Ribosomal protein S4/S9 N-terminal domain N4T41_17810 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain N4T41_17810 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain N4T41_17810 PF01000 RNA polymerase Rpb3/RpoA insert domain N4T41_17815 PF01196 Ribosomal protein L17 N4T41_17820 PF00743 Flavin-binding monooxygenase-like N4T41_17825 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_17825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_17825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_17830 PF03937 Flavinator of succinate dehydrogenase N4T41_17860 PF09526 Probable metal-binding protein (DUF2387) N4T41_17865 PF01432 Peptidase family M3 N4T41_17870 PF00575 S1 RNA binding domain N4T41_17870 PF08206 Ribonuclease B OB domain N4T41_17870 PF08461 Ribonuclease R winged-helix domain N4T41_17870 PF17876 Cold shock domain N4T41_17870 PF00773 RNB domain N4T41_17915 PF01557 Fumarylacetoacetate (FAA) hydrolase family N4T41_17925 PF00892 EamA-like transporter family N4T41_17930 PF03631 Virulence factor BrkB N4T41_17935 PF03358 NADPH-dependent FMN reductase N4T41_17960 PF02130 Uncharacterized protein family UPF0054 N4T41_17965 PF02562 PhoH-like protein N4T41_17970 PF00919 Uncharacterized protein family UPF0004 N4T41_17970 PF01938 TRAM domain N4T41_17970 PF04055 Radical SAM superfamily N4T41_17975 PF01464 Transglycosylase SLT domain N4T41_17975 PF10145 Phage-related minor tail protein N4T41_17975 PF01551 Peptidase family M23 N4T41_17985 PF00056 lactate/malate dehydrogenase, NAD binding domain N4T41_17985 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N4T41_18005 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ N4T41_18010 PF01066 CDP-alcohol phosphatidyltransferase N4T41_18055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_18055 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_18055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_18060 PF17932 Tetracyclin repressor-like, C-terminal domain N4T41_18060 PF00440 Bacterial regulatory proteins, tetR family N4T41_18075 PF01039 Carboxyl transferase domain N4T41_18080 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_18080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_18080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_18085 PF00378 Enoyl-CoA hydratase/isomerase N4T41_18085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T41_18085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T41_18090 PF00289 Biotin carboxylase, N-terminal domain N4T41_18090 PF00364 Biotin-requiring enzyme N4T41_18090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4T41_18090 PF02785 Biotin carboxylase C-terminal domain N4T41_18100 PF04386 Stringent starvation protein B N4T41_18105 PF00043 Glutathione S-transferase, C-terminal domain N4T41_18105 PF13417 Glutathione S-transferase, N-terminal domain N4T41_18110 PF00380 Ribosomal protein S9/S16 N4T41_18115 PF00572 Ribosomal protein L13 N4T41_18120 PF04166 Pyridoxal phosphate biosynthetic protein PdxA N4T41_18125 PF00398 Ribosomal RNA adenine dimethylase N4T41_18130 PF00149 Calcineurin-like phosphoesterase N4T41_18150 PF16360 GTP-binding GTPase Middle Region N4T41_18150 PF13167 GTP-binding GTPase N-terminal N4T41_18150 PF01926 50S ribosome-binding GTPase N4T41_18160 PF13091 PLD-like domain N4T41_18165 PF10518 TAT (twin-arginine translocation) pathway signal sequence N4T41_18165 PF00149 Calcineurin-like phosphoesterase N4T41_18170 PF00691 OmpA family N4T41_18170 PF01389 OmpA-like transmembrane domain N4T41_18175 PF17152 Periplasmic sensor domain N4T41_18175 PF00990 Diguanylate cyclase, GGDEF domain N4T41_18210 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_18210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4T41_18220 PF04273 Putative phosphatase (DUF442) N4T41_18220 PF00753 Metallo-beta-lactamase superfamily N4T41_18225 PF00561 alpha/beta hydrolase fold N4T41_18230 PF00085 Thioredoxin N4T41_18235 PF03061 Thioesterase superfamily N4T41_18245 PF04461 Protein of unknown function (DUF520) N4T41_18255 PF01266 FAD dependent oxidoreductase N4T41_18255 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N4T41_18265 PF03795 YCII-related domain N4T41_18270 PF04279 Intracellular septation protein A N4T41_18275 PF02811 PHP domain N4T41_18280 PF01062 Bestrophin, RFP-TM, chloride channel N4T41_18285 PF04002 RadC-like JAB domain N4T41_18290 PF04127 DNA / pantothenate metabolism flavoprotein N4T41_18290 PF02441 Flavoprotein N4T41_18295 PF07549 SecD/SecF GG Motif N4T41_18295 PF02355 Protein export membrane protein N4T41_18305 PF02699 Preprotein translocase subunit N4T41_18310 PF01702 Queuine tRNA-ribosyltransferase N4T41_18325 PF02547 Queuosine biosynthesis protein N4T41_18340 PF04245 37-kD nucleoid-associated bacterial protein N4T41_18360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N4T41_18360 PF00072 Response regulator receiver domain N4T41_18360 PF01627 Hpt domain N4T41_18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_18360 PF00672 HAMP domain N4T41_18360 PF00512 His Kinase A (phospho-acceptor) domain N4T41_18365 PF08335 GlnD PII-uridylyltransferase N4T41_18365 PF03710 Glutamate-ammonia ligase adenylyltransferase N4T41_18370 PF01063 Amino-transferase class IV N4T41_18385 PF01522 Polysaccharide deacetylase N4T41_18390 PF00535 Glycosyl transferase family 2 N4T41_18395 PF13439 Glycosyltransferase Family 4 N4T41_18395 PF00534 Glycosyl transferases group 1 N4T41_18420 PF00665 Integrase core domain N4T41_18420 PF13936 Helix-turn-helix domain N4T41_18430 PF03275 UDP-galactopyranose mutase N4T41_18440 PF17101 Stealth protein CR1, conserved region 1 N4T41_18440 PF11380 Stealth protein CR2, conserved region 2 N4T41_18440 PF17102 Stealth protein CR3, conserved region 3 N4T41_18445 PF02938 GAD domain N4T41_18445 PF00152 tRNA synthetases class II (D, K and N) N4T41_18445 PF01336 OB-fold nucleic acid binding domain N4T41_18455 PF07715 TonB-dependent Receptor Plug Domain N4T41_18455 PF00593 TonB dependent receptor N4T41_18475 PF06146 Phosphate-starvation-inducible E N4T41_18480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_18480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_18480 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T41_18480 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_18485 PF02770 Acyl-CoA dehydrogenase, middle domain N4T41_18485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4T41_18485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4T41_18485 PF12806 Acetyl-CoA dehydrogenase C-terminal like N4T41_18495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4T41_18495 PF00512 His Kinase A (phospho-acceptor) domain N4T41_18495 PF00672 HAMP domain N4T41_18500 PF00072 Response regulator receiver domain N4T41_18500 PF00486 Transcriptional regulatory protein, C terminal N4T41_18505 PF02696 Uncharacterized ACR, YdiU/UPF0061 family N4T41_18520 PF03009 Glycerophosphoryl diester phosphodiesterase family N4T41_18525 PF01923 Cobalamin adenosyltransferase N4T41_18530 PF00593 TonB dependent receptor N4T41_18530 PF07715 TonB-dependent Receptor Plug Domain N4T41_18535 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N4T41_18540 PF00291 Pyridoxal-phosphate dependent enzyme N4T41_18565 PF00290 Tryptophan synthase alpha chain N4T41_18570 PF01039 Carboxyl transferase domain N4T41_18575 PF02875 Mur ligase family, glutamate ligase domain N4T41_18575 PF08245 Mur ligase middle domain N4T41_18590 PF00753 Metallo-beta-lactamase superfamily N4T41_18595 PF10417 C-terminal domain of 1-Cys peroxiredoxin N4T41_18595 PF00578 AhpC/TSA family N4T41_18600 PF02810 SEC-C motif N4T41_18600 PF07517 SecA DEAD-like domain N4T41_18600 PF01043 SecA preprotein cross-linking domain N4T41_18600 PF07516 SecA Wing and Scaffold domain N4T41_18610 PF07690 Major Facilitator Superfamily N4T41_18610 PF00083 Sugar (and other) transporter N4T41_18615 PF03006 Haemolysin-III related N4T41_18640 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4T41_18640 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4T41_18640 PF00378 Enoyl-CoA hydratase/isomerase N4T41_18645 PF02803 Thiolase, C-terminal domain N4T41_18645 PF00108 Thiolase, N-terminal domain N4T41_18650 PF02311 AraC-like ligand binding domain N4T41_18650 PF12833 Helix-turn-helix domain N4T41_18655 PF02515 CoA-transferase family III N4T41_18660 PF04966 Carbohydrate-selective porin, OprB family N4T41_18665 PF01011 PQQ enzyme repeat N4T41_18670 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N4T41_18670 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N4T41_18680 PF00893 Small Multidrug Resistance protein N4T41_18690 PF02803 Thiolase, C-terminal domain N4T41_18690 PF00108 Thiolase, N-terminal domain N4T41_18700 PF00691 OmpA family N4T41_18700 PF13505 Outer membrane protein beta-barrel domain N4T41_18710 PF01139 tRNA-splicing ligase RtcB N4T41_18715 PF00324 Amino acid permease N4T41_18720 PF08468 Methyltransferase small domain N-terminal N4T41_18720 PF05175 Methyltransferase small domain N4T41_18725 PF00860 Permease family N4T41_18730 PF03144 Elongation factor Tu domain 2 N4T41_18730 PF00009 Elongation factor Tu GTP binding domain N4T41_18730 PF00679 Elongation factor G C-terminus N4T41_18735 PF01741 Large-conductance mechanosensitive channel, MscL N4T41_18750 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N4T41_18750 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N4T41_18750 PF06827 Zinc finger found in FPG and IleRS N4T41_18755 PF02245 Methylpurine-DNA glycosylase (MPG) N4T41_18760 PF00593 TonB dependent receptor N4T41_18760 PF07715 TonB-dependent Receptor Plug Domain N4T41_18765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T41_18780 PF10411 Disulfide bond isomerase protein N-terminus N4T41_18780 PF13098 Thioredoxin-like domain N4T41_18785 PF01571 Aminomethyltransferase folate-binding domain N4T41_18795 PF04343 Protein of unknown function, DUF488 N4T41_18800 PF03831 PhnA domain N4T41_18800 PF08274 PhnA Zinc-Ribbon N4T41_18805 PF07411 Domain of unknown function (DUF1508) N4T41_18810 PF03129 Anticodon binding domain N4T41_18810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4T41_18810 PF04073 Aminoacyl-tRNA editing domain N4T41_18815 PF00873 AcrB/AcrD/AcrF family N4T41_18830 PF00072 Response regulator receiver domain N4T41_18835 PF00072 Response regulator receiver domain N4T41_18845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4T41_18845 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term N4T41_18860 PF07687 Peptidase dimerisation domain N4T41_18860 PF01546 Peptidase family M20/M25/M40 N4T41_18865 PF08085 Entericidin EcnA/B family N4T41_18875 PF04304 Protein of unknown function (DUF454) N4T41_18880 PF17969 L,D-transpeptidase C-terminal domain N4T41_18880 PF03734 L,D-transpeptidase catalytic domain N4T41_18920 PF00175 Oxidoreductase NAD-binding domain N4T41_18920 PF00667 FAD binding domain N4T41_18920 PF00258 Flavodoxin N4T41_18930 PF12805 FUSC-like inner membrane protein yccS N4T41_18935 PF07690 Major Facilitator Superfamily N4T41_18940 PF00881 Nitroreductase family N4T41_18955 PF01235 Sodium:alanine symporter family N4T41_18960 PF01734 Patatin-like phospholipase N4T41_18965 PF00291 Pyridoxal-phosphate dependent enzyme N4T41_18965 PF13291 ACT domain N4T41_18970 PF05992 SbmA/BacA-like family N4T41_19000 PF02934 GatB/GatE catalytic domain N4T41_19000 PF02637 GatB domain N4T41_19005 PF01425 Amidase N4T41_19010 PF02686 Glu-tRNAGln amidotransferase C subunit N4T41_19020 PF04085 rod shape-determining protein MreC N4T41_19025 PF04093 rod shape-determining protein MreD N4T41_19030 PF02545 Maf-like protein N4T41_19035 PF10150 Ribonuclease E/G family N4T41_19035 PF00575 S1 RNA binding domain N4T41_19045 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain N4T41_19045 PF06974 Protein of unknown function (DUF1298) N4T41_19050 PF01507 Phosphoadenosine phosphosulfate reductase family N4T41_19065 PF02525 Flavodoxin-like fold N4T41_19085 PF02673 Bacitracin resistance protein BacA N4T41_19090 PF06719 AraC-type transcriptional regulator N-terminus N4T41_19090 PF12833 Helix-turn-helix domain N4T41_19095 PF08240 Alcohol dehydrogenase GroES-like domain N4T41_19095 PF16197 Ketoacyl-synthetase C-terminal extension N4T41_19095 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T41_19095 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T41_19095 PF08659 KR domain N4T41_19095 PF00550 Phosphopantetheine attachment site N4T41_19095 PF14765 Polyketide synthase dehydratase N4T41_19095 PF00698 Acyl transferase domain N4T41_19095 PF09277 Erythronolide synthase, docking N4T41_19095 PF08990 Erythronolide synthase docking N4T41_19100 PF01965 DJ-1/PfpI family N4T41_19110 PF00004 ATPase family associated with various cellular activities (AAA) N4T41_19135 PF13936 Helix-turn-helix domain N4T41_19135 PF00665 Integrase core domain N4T41_19140 PF01636 Phosphotransferase enzyme family N4T41_19160 PF00692 dUTPase N4T41_19190 PF01207 Dihydrouridine synthase (Dus) N4T41_19200 PF02881 SRP54-type protein, helical bundle domain N4T41_19200 PF00448 SRP54-type protein, GTPase domain N4T41_19200 PF02978 Signal peptide binding domain N4T41_19205 PF03309 Type III pantothenate kinase N4T41_19215 PF01925 Sulfite exporter TauE/SafE N4T41_19225 PF06470 SMC proteins Flexible Hinge Domain N4T41_19225 PF02463 RecF/RecN/SMC N terminal domain N4T41_19235 PF03120 NAD-dependent DNA ligase OB-fold domain N4T41_19235 PF01653 NAD-dependent DNA ligase adenylation domain N4T41_19235 PF12826 Helix-hairpin-helix motif N4T41_19235 PF00533 BRCA1 C Terminus (BRCT) domain N4T41_19235 PF03119 NAD-dependent DNA ligase C4 zinc finger domain N4T41_19240 PF00210 Ferritin-like domain N4T41_19245 PF07690 Major Facilitator Superfamily N4T41_19250 PF00982 Glycosyltransferase family 20 N4T41_19255 PF02358 Trehalose-phosphatase N4T41_19260 PF12697 Alpha/beta hydrolase family N4T41_19260 PF08241 Methyltransferase domain N4T41_19265 PF00202 Aminotransferase class-III N4T41_19265 PF06968 Biotin and Thiamin Synthesis associated domain N4T41_19265 PF04055 Radical SAM superfamily N4T41_19270 PF00155 Aminotransferase class I and II N4T41_19285 PF00849 RNA pseudouridylate synthase N4T41_19285 PF01479 S4 domain N4T41_19290 PF04079 Segregation and condensation complex subunit ScpB N4T41_19295 PF02616 Segregation and condensation protein ScpA N4T41_19300 PF01300 Telomere recombination N4T41_19305 PF04315 Elongation factor P hydroxylase N4T41_19310 PF02620 Large ribosomal RNA subunit accumulation protein YceD N4T41_19315 PF01783 Ribosomal L32p protein family N4T41_19320 PF00698 Acyl transferase domain N4T41_19330 PF00550 Phosphopantetheine attachment site N4T41_19335 PF04972 BON domain N4T41_19335 PF01476 LysM domain N4T41_19340 PF03070 TENA/THI-4/PQQC family N4T41_19340 PF02581 Thiamine monophosphate synthase N4T41_19340 PF08543 Phosphomethylpyrimidine kinase N4T41_19350 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N4T41_19365 PF02261 Aspartate decarboxylase N4T41_19370 PF01195 Peptidyl-tRNA hydrolase N4T41_19375 PF01386 Ribosomal L25p family N4T41_19380 PF14572 Phosphoribosyl synthetase-associated domain N4T41_19380 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N4T41_19405 PF08544 GHMP kinases C terminal N4T41_19405 PF00288 GHMP kinases N terminal domain N4T41_19410 PF03550 Outer membrane lipoprotein LolB N4T41_19420 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N4T41_19420 PF01488 Shikimate / quinate 5-dehydrogenase N4T41_19420 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N4T41_19425 PF10410 DnaB-helicase binding domain of primase N4T41_19425 PF08278 DNA primase DnaG DnaB-binding N4T41_19425 PF08275 DNA primase catalytic core, N-terminal domain N4T41_19425 PF01807 CHC2 zinc finger N4T41_19430 PF13525 Outer membrane lipoprotein N4T41_19435 PF01479 S4 domain N4T41_19435 PF00849 RNA pseudouridylate synthase N4T41_19440 PF02578 Multi-copper polyphenol oxidoreductase laccase N4T41_19445 PF03358 NADPH-dependent FMN reductase N4T41_19450 PF01668 SmpB protein N4T41_19485 PF12684 PDDEXK-like domain of unknown function (DUF3799) N4T41_19485 PF06630 Enterobacterial exodeoxyribonuclease VIII N4T41_19515 PF01381 Helix-turn-helix N4T41_19545 PF00772 DnaB-like helicase N terminal domain N4T41_19545 PF03796 DnaB-like helicase C terminal domain N4T41_19765 PF08346 AntA/AntB antirepressor N4T41_19765 PF10548 P22AR C-terminal domain N4T41_19775 PF01551 Peptidase family M23 N4T41_19775 PF08525 Opacity-associated protein A N-terminal motif N4T41_19775 PF01476 LysM domain N4T41_19855 PF13356 Arm DNA-binding domain N4T41_19855 PF00589 Phage integrase family N4T41_19860 PF01467 Cytidylyltransferase-like N4T41_19865 PF00037 4Fe-4S binding domain N4T41_19885 PF03466 LysR substrate binding domain N4T41_19885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_19890 PF00180 Isocitrate/isopropylmalate dehydrogenase N4T41_19895 PF02028 BCCT, betaine/carnitine/choline family transporter N4T41_19900 PF07859 alpha/beta hydrolase fold N4T41_19905 PF00355 Rieske [2Fe-2S] domain N4T41_19905 PF00848 Ring hydroxylating alpha subunit (catalytic domain) N4T41_19910 PF00171 Aldehyde dehydrogenase family N4T41_19915 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T41_19915 PF00175 Oxidoreductase NAD-binding domain N4T41_19915 PF00970 Oxidoreductase FAD-binding domain N4T41_19930 PF02540 NAD synthase N4T41_19930 PF00795 Carbon-nitrogen hydrolase N4T41_19940 PF02678 Pirin N4T41_19940 PF05726 Pirin C-terminal cupin domain N4T41_19945 PF03653 Uncharacterised protein family (UPF0093) N4T41_19950 PF00109 Beta-ketoacyl synthase, N-terminal domain N4T41_19950 PF02801 Beta-ketoacyl synthase, C-terminal domain N4T41_19960 PF00164 Ribosomal protein S12/S23 N4T41_19965 PF00177 Ribosomal protein S7p/S5e N4T41_19970 PF03144 Elongation factor Tu domain 2 N4T41_19970 PF00679 Elongation factor G C-terminus N4T41_19970 PF14492 Elongation Factor G, domain II N4T41_19970 PF03764 Elongation factor G, domain IV N4T41_19970 PF00009 Elongation factor Tu GTP binding domain N4T41_19975 PF00009 Elongation factor Tu GTP binding domain N4T41_19975 PF03144 Elongation factor Tu domain 2 N4T41_19975 PF03143 Elongation factor Tu C-terminal domain N4T41_19990 PF00583 Acetyltransferase (GNAT) family N4T41_19995 PF04376 Arginine-tRNA-protein transferase, N terminus N4T41_19995 PF04377 Arginine-tRNA-protein transferase, C terminus N4T41_20000 PF03588 Leucyl/phenylalanyl-tRNA protein transferase N4T41_20005 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_20010 PF13491 4TM region of DNA translocase FtsK/SpoIIIE N4T41_20010 PF17854 FtsK alpha domain N4T41_20010 PF09397 Ftsk gamma domain N4T41_20010 PF01580 FtsK/SpoIIIE family N4T41_20015 PF01810 LysE type translocator N4T41_20025 PF03776 Septum formation topological specificity factor MinE N4T41_20030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N4T41_20035 PF03775 Septum formation inhibitor MinC, C-terminal domain N4T41_20045 PF01553 Acyltransferase N4T41_20050 PF00691 OmpA family N4T41_20050 PF13488 Glycine zipper N4T41_20055 PF00580 UvrD/REP helicase N-terminal domain N4T41_20055 PF13361 UvrD-like helicase C-terminal domain N4T41_20060 PF00692 dUTPase N4T41_20065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4T41_20065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4T41_20065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4T41_20065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4T41_20070 PF00696 Amino acid kinase family N4T41_20080 PF13230 Glutamine amidotransferases class-II N4T41_20085 PF01814 Hemerythrin HHE cation binding domain N4T41_20095 PF03658 RnfH family Ubiquitin N4T41_20100 PF04355 SmpA / OmlA family N4T41_20105 PF01475 Ferric uptake regulator family N4T41_20110 PF00437 Type II/IV secretion system protein N4T41_20115 PF00437 Type II/IV secretion system protein N4T41_20120 PF01168 Alanine racemase, N-terminal domain N4T41_20130 PF00149 Calcineurin-like phosphoesterase N4T41_20130 PF12320 Type 5 capsule protein repressor C-terminal domain N4T41_20150 PF08338 Domain of unknown function (DUF1731) N4T41_20150 PF01370 NAD dependent epimerase/dehydratase family N4T41_20155 PF01266 FAD dependent oxidoreductase N4T41_20160 PF00490 Delta-aminolevulinic acid dehydratase N4T41_20165 PF03061 Thioesterase superfamily N4T41_20170 PF13533 Biotin-lipoyl like N4T41_20175 PF07690 Major Facilitator Superfamily N4T41_20240 PF02384 N-6 DNA Methylase N4T41_20240 PF12161 HsdM N-terminal domain N4T41_20250 PF08463 EcoEI R protein C-terminal N4T41_20250 PF00271 Helicase conserved C-terminal domain N4T41_20250 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N4T41_20250 PF04851 Type III restriction enzyme, res subunit N4T41_20260 PF00083 Sugar (and other) transporter N4T41_20265 PF00701 Dihydrodipicolinate synthetase family N4T41_20275 PF04542 Sigma-70 region 2 N4T41_20275 PF08281 Sigma-70, region 4 N4T41_20285 PF07715 TonB-dependent Receptor Plug Domain N4T41_20285 PF00593 TonB dependent receptor N4T41_20295 PF04575 Protein of unknown function (DUF560) N4T41_20305 PF01126 Heme oxygenase N4T41_20330 PF13520 Amino acid permease N4T41_20345 PF06039 Malate:quinone oxidoreductase (Mqo) N4T41_20350 PF00732 GMC oxidoreductase N4T41_20350 PF05199 GMC oxidoreductase N4T41_20355 PF00171 Aldehyde dehydrogenase family N4T41_20360 PF13977 BetI-type transcriptional repressor, C-terminal N4T41_20360 PF00440 Bacterial regulatory proteins, tetR family N4T41_20365 PF02028 BCCT, betaine/carnitine/choline family transporter N4T41_20370 PF02028 BCCT, betaine/carnitine/choline family transporter N4T41_20380 PF03061 Thioesterase superfamily N4T41_20390 PF02492 CobW/HypB/UreG, nucleotide-binding domain N4T41_20390 PF07683 Cobalamin synthesis protein cobW C-terminal domain N4T41_20395 PF00375 Sodium:dicarboxylate symporter family N4T41_20400 PF07152 YaeQ protein N4T41_20405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4T41_20410 PF14883 Hypothetical glycosyl hydrolase family 13 N4T41_20410 PF01522 Polysaccharide deacetylase N4T41_20415 PF00535 Glycosyl transferase family 2 N4T41_20425 PF00378 Enoyl-CoA hydratase/isomerase N4T41_20440 PF09339 IclR helix-turn-helix domain N4T41_20440 PF01614 Bacterial transcriptional regulator N4T41_20445 PF00355 Rieske [2Fe-2S] domain N4T41_20455 PF00355 Rieske [2Fe-2S] domain N4T41_20465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4T41_20470 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_20470 PF14759 Reductase C-terminal N4T41_20475 PF07690 Major Facilitator Superfamily N4T41_20495 PF01958 Domain of unknown function DUF108 N4T41_20495 PF03447 Homoserine dehydrogenase, NAD binding domain N4T41_20500 PF00171 Aldehyde dehydrogenase family N4T41_20505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4T41_20505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4T41_20505 PF00205 Thiamine pyrophosphate enzyme, central domain N4T41_20515 PF07690 Major Facilitator Superfamily N4T41_20520 PF01327 Polypeptide deformylase N4T41_20525 PF04960 Glutaminase N4T41_20530 PF12833 Helix-turn-helix domain N4T41_20530 PF02311 AraC-like ligand binding domain N4T41_20535 PF07690 Major Facilitator Superfamily N4T41_20540 PF01263 Aldose 1-epimerase N4T41_20550 PF03466 LysR substrate binding domain N4T41_20550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_20560 PF07690 Major Facilitator Superfamily N4T41_20565 PF00456 Transketolase, thiamine diphosphate binding domain N4T41_20570 PF02779 Transketolase, pyrimidine binding domain N4T41_20570 PF02780 Transketolase, C-terminal domain N4T41_20575 PF00809 Pterin binding enzyme N4T41_20575 PF02310 B12 binding domain N4T41_20575 PF02574 Homocysteine S-methyltransferase N4T41_20575 PF02965 Vitamin B12 dependent methionine synthase, activation domain N4T41_20575 PF02607 B12 binding domain N4T41_20580 PF01384 Phosphate transporter family N4T41_20585 PF00291 Pyridoxal-phosphate dependent enzyme N4T41_20600 PF03781 Sulfatase-modifying factor enzyme 1 N4T41_20605 PF00884 Sulfatase N4T41_20615 PF01521 Iron-sulphur cluster biosynthesis N4T41_20615 PF01106 NifU-like domain N4T41_20620 PF07715 TonB-dependent Receptor Plug Domain N4T41_20620 PF00593 TonB dependent receptor N4T41_20630 PF00561 alpha/beta hydrolase fold N4T41_20635 PF00484 Carbonic anhydrase N4T41_20640 PF13472 GDSL-like Lipase/Acylhydrolase family N4T41_20645 PF00005 ABC transporter N4T41_20655 PF01694 Rhomboid family N4T41_20660 PF00912 Transglycosylase N4T41_20665 PF02503 Polyphosphate kinase middle domain N4T41_20665 PF13090 Polyphosphate kinase C-terminal domain 2 N4T41_20665 PF13089 Polyphosphate kinase N-terminal domain N4T41_20665 PF17941 Polyphosphate kinase C-terminal domain 1 N4T41_20680 PF03466 LysR substrate binding domain N4T41_20680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_20685 PF00561 alpha/beta hydrolase fold N4T41_20695 PF00301 Rubredoxin N4T41_20710 PF00152 tRNA synthetases class II (D, K and N) N4T41_20710 PF01336 OB-fold nucleic acid binding domain N4T41_20720 PF14052 Capsule assembly protein Wzi N4T41_20730 PF01507 Phosphoadenosine phosphosulfate reductase family N4T41_20735 PF00009 Elongation factor Tu GTP binding domain N4T41_20750 PF03600 Citrate transporter N4T41_20755 PF03471 Transporter associated domain N4T41_20755 PF01595 Cyclin M transmembrane N-terminal domain N4T41_20755 PF00571 CBS domain N4T41_20760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_20760 PF03466 LysR substrate binding domain N4T41_20765 PF00463 Isocitrate lyase family N4T41_20780 PF01774 UreD urease accessory protein N4T41_20785 PF00547 Urease, gamma subunit N4T41_20790 PF00699 Urease beta subunit N4T41_20800 PF00449 Urease alpha-subunit, N-terminal domain N4T41_20800 PF01979 Amidohydrolase family N4T41_20805 PF05194 UreE urease accessory protein, C-terminal domain N4T41_20805 PF02814 UreE urease accessory protein, N-terminal domain N4T41_20810 PF01730 UreF N4T41_20815 PF02492 CobW/HypB/UreG, nucleotide-binding domain N4T41_20830 PF03717 Penicillin-binding Protein dimerisation domain N4T41_20830 PF00905 Penicillin binding protein transpeptidase domain N4T41_20845 PF05191 Adenylate kinase, active site lid N4T41_20855 PF10576 Iron-sulfur binding domain of endonuclease III N4T41_20855 PF00633 Helix-hairpin-helix motif N4T41_20855 PF00730 HhH-GPD superfamily base excision DNA repair protein N4T41_20860 PF04060 Putative Fe-S cluster N4T41_20865 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase N4T41_20865 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain N4T41_20875 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase N4T41_20880 PF02590 Predicted SPOUT methyltransferase N4T41_20885 PF05362 Lon protease (S16) C-terminal proteolytic domain N4T41_20885 PF02190 ATP-dependent protease La (LON) substrate-binding domain N4T41_20885 PF00004 ATPase family associated with various cellular activities (AAA) N4T41_20895 PF13018 Extended Signal Peptide of Type V secretion system N4T41_20895 PF03895 YadA-like membrane anchor domain N4T41_20895 PF05658 Head domain of trimeric autotransporter adhesin N4T41_20895 PF05662 Coiled stalk of trimeric autotransporter adhesin N4T41_20900 PF00691 OmpA family N4T41_20900 PF04355 SmpA / OmlA family N4T41_20905 PF01812 5-formyltetrahydrofolate cyclo-ligase family N4T41_21200 PF01551 Peptidase family M23 N4T41_21200 PF10145 Phage-related minor tail protein N4T41_21200 PF01464 Transglycosylase SLT domain N4T41_21245 PF00884 Sulfatase N4T41_21245 PF08019 Phosphoethanolamine transferase EptA/EptB N4T41_21255 PF13737 Transposase DDE domain N4T41_21285 PF05195 Aminopeptidase P, N-terminal domain N4T41_21285 PF00557 Metallopeptidase family M24 N4T41_21290 PF01494 FAD binding domain N4T41_21295 PF01494 FAD binding domain N4T41_21305 PF13411 MerR HTH family regulatory protein N4T41_21315 PF01810 LysE type translocator N4T41_21320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4T41_21320 PF03466 LysR substrate binding domain N4T41_21330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N4T41_21335 PF02021 Uncharacterised protein family UPF0102 N4T41_21340 PF04972 BON domain N4T41_21350 PF09297 NADH pyrophosphatase zinc ribbon domain N4T41_21350 PF00293 NUDIX domain N4T41_21375 PF00929 Exonuclease N4T41_21380 PF01464 Transglycosylase SLT domain N4T41_21380 PF01476 LysM domain N4T41_21380 PF01476 LysM domain N4T41_21380 PF01464 Transglycosylase SLT domain N4T41_21385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N4T41_21390 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_21395 PF00528 Binding-protein-dependent transport system inner membrane component N4T41_21395 PF12911 N-terminal TM domain of oligopeptide transport permease C N4T41_21400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4T41_21400 PF00005 ABC transporter N4T41_21405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T41_21405 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_21410 PF07715 TonB-dependent Receptor Plug Domain N4T41_21410 PF00593 TonB dependent receptor N4T41_21420 PF00929 Exonuclease N4T41_21425 PF01979 Amidohydrolase family N4T41_21435 PF00764 Arginosuccinate synthase N4T41_21440 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4T41_21440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4T41_21450 PF00589 Phage integrase family N4T41_21450 PF13356 Arm DNA-binding domain N4T41_21475 PF13737 Transposase DDE domain N4T41_21490 PF00175 Oxidoreductase NAD-binding domain N4T41_21490 PF00111 2Fe-2S iron-sulfur cluster binding domain N4T41_21495 PF00355 Rieske [2Fe-2S] domain N4T41_21505 PF03781 Sulfatase-modifying factor enzyme 1 N4T41_21510 PF00884 Sulfatase N4T41_21515 PF07690 Major Facilitator Superfamily N4T41_21525 PF05199 GMC oxidoreductase N4T41_21530 PF07859 alpha/beta hydrolase fold N4T41_21535 PF00106 short chain dehydrogenase N4T41_21540 PF00743 Flavin-binding monooxygenase-like N4T41_21545 PF12833 Helix-turn-helix domain N4T41_21545 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term N4T41_21550 PF04072 Leucine carboxyl methyltransferase N4T41_21560 PF00106 short chain dehydrogenase N4T41_21570 PF00440 Bacterial regulatory proteins, tetR family N4T41_21570 PF17932 Tetracyclin repressor-like, C-terminal domain N4T41_21575 PF17954 Quercetinase C-terminal cupin domain N4T41_21575 PF02678 Pirin N4T41_21585 PF00106 short chain dehydrogenase N4T41_21590 PF00743 Flavin-binding monooxygenase-like N4T41_21600 PF00860 Permease family N4T41_21605 PF00962 Adenosine/AMP deaminase N4T41_21610 PF01292 Prokaryotic cytochrome b561 N4T41_21620 PF01351 Ribonuclease HII N4T41_21625 PF02599 Global regulator protein family N4T41_21630 PF13840 ACT domain N4T41_21630 PF00696 Amino acid kinase family N4T41_21630 PF01842 ACT domain N4T41_21735 PF01695 IstB-like ATP binding protein N4T41_21775 PF01476 LysM domain N4T41_21775 PF08525 Opacity-associated protein A N-terminal motif N4T41_21775 PF01551 Peptidase family M23 N4T41_21855 PF13356 Arm DNA-binding domain N4T41_21855 PF00589 Phage integrase family N4T41_21890 PF12684 PDDEXK-like domain of unknown function (DUF3799) N4T41_21890 PF06630 Enterobacterial exodeoxyribonuclease VIII N4T41_21920 PF01381 Helix-turn-helix N4T41_21950 PF00772 DnaB-like helicase N terminal domain N4T41_21950 PF03796 DnaB-like helicase C terminal domain N4T41_22170 PF10548 P22AR C-terminal domain N4T41_22170 PF08346 AntA/AntB antirepressor