locus-tag class description PF552_00005 IPR003593 AAA+ ATPase domain PF552_00005 IPR001957 Chromosomal replication control, initiator DnaA PF552_00005 IPR020591 Chromosomal replication control, initiator DnaA-like PF552_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site PF552_00005 IPR013317 Chromosomal replication initiator protein DnaA PF552_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal PF552_00005 IPR024633 DnaA N-terminal domain PF552_00005 IPR038454 DnaA, N-terminal domain superfamily PF552_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_00005 IPR010921 Trp repressor/replication initiator PF552_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal PF552_00010 IPR022637 DNA polymerase III, beta sliding clamp, central PF552_00010 IPR001001 DNA polymerase III, beta sliding clamp PF552_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal PF552_00015 IPR001238 DNA-binding, RecF PF552_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_00015 IPR003395 RecF/RecN/SMC, N-terminal PF552_00015 IPR042174 DNA-binding RecF, domain 2 PF552_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PF552_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain PF552_00020 IPR006171 TOPRIM domain PF552_00020 IPR018522 DNA topoisomerase, type IIA, conserved site PF552_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 PF552_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal PF552_00020 IPR001241 DNA topoisomerase, type IIA PF552_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_00020 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_00020 IPR003594 Histidine kinase/HSP90-like ATPase PF552_00020 IPR041423 DNA gyrase subunit B insert domain PF552_00020 IPR011557 DNA gyrase, subunit B PF552_00020 IPR002288 DNA gyrase B subunit, C-terminal PF552_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PF552_00030 IPR032818 DedA family PF552_00030 IPR032816 SNARE associated Golgi protein PF552_00035 IPR003593 AAA+ ATPase domain PF552_00035 IPR032781 ABC-transporter extension domain PF552_00035 IPR003439 ABC transporter-like PF552_00035 IPR017871 ABC transporter, conserved site PF552_00035 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_00040 IPR038404 TRAP transporter solute receptor DctP superfamily PF552_00045 IPR038404 TRAP transporter solute receptor DctP superfamily PF552_00050 IPR038404 TRAP transporter solute receptor DctP superfamily PF552_00055 IPR023063 FeS cluster insertion protein ErpA PF552_00055 IPR017870 FeS cluster insertion, C-terminal, conserved site PF552_00055 IPR035903 HesB-like domain superfamily PF552_00055 IPR016092 FeS cluster insertion protein PF552_00055 IPR000361 FeS cluster biogenesis PF552_00060 IPR029058 Alpha/Beta hydrolase fold PF552_00060 IPR000073 Alpha/beta hydrolase fold-1 PF552_00060 IPR000639 Epoxide hydrolase-like PF552_00065 IPR005338 Anhydro-N-acetylmuramic acid kinase PF552_00070 IPR002307 Tyrosine-tRNA ligase PF552_00070 IPR036986 RNA-binding S4 domain superfamily PF552_00070 IPR002942 RNA-binding S4 domain PF552_00070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_00070 IPR002305 Aminoacyl-tRNA synthetase, class Ic PF552_00070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PF552_00070 IPR024088 Tyrosine-tRNA ligase, bacterial-type PF552_00070 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 PF552_00110 IPR000175 Sodium:neurotransmitter symporter PF552_00110 IPR037272 Sodium:neurotransmitter symporter superfamily PF552_00120 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site PF552_00120 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type PF552_00120 IPR035926 NusB-like superfamily PF552_00120 IPR004573 rRNA small subunit methyltransferase B PF552_00120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_00120 IPR023267 RNA (C5-cytosine) methyltransferase PF552_00120 IPR006027 NusB/RsmB/TIM44 PF552_00125 IPR005793 Formyl transferase, C-terminal PF552_00125 IPR037022 Formyl transferase, C-terminal domain superfamily PF552_00125 IPR002376 Formyl transferase, N-terminal PF552_00125 IPR036477 Formyl transferase, N-terminal domain superfamily PF552_00125 IPR011034 Formyl transferase-like, C-terminal domain superfamily PF552_00125 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain PF552_00125 IPR005794 Methionyl-tRNA formyltransferase PF552_00130 IPR042096 Dihydroxy-acid dehydratase, C-terminal PF552_00130 IPR037237 IlvD/EDD, N-terminal domain PF552_00130 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site PF552_00130 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase PF552_00130 IPR004404 Dihydroxy-acid dehydratase PF552_00145 IPR000847 Transcription regulator HTH, LysR PF552_00145 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_00145 IPR036390 Winged helix DNA-binding domain superfamily PF552_00145 IPR005119 LysR, substrate-binding PF552_00150 IPR019918 Pyrimidine permease RutG, predicted PF552_00150 IPR006042 Xanthine/uracil permease PF552_00150 IPR006043 Xanthine/uracil/vitamin C permease PF552_00155 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type PF552_00155 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PF552_00155 IPR033129 Phosphoenolpyruvate carboxylase, His active site PF552_00155 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site PF552_00155 IPR021135 Phosphoenolpyruvate carboxylase PF552_00160 IPR013572 Transcription regulator MAATS, C-terminal PF552_00160 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PF552_00160 IPR001647 DNA-binding HTH domain, TetR-type PF552_00160 IPR009057 Homeobox-like domain superfamily PF552_00160 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PF552_00165 IPR006143 RND efflux pump, membrane fusion protein PF552_00165 IPR030190 Macrolide export protein MacA PF552_00165 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PF552_00180 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily PF552_00180 IPR001305 Heat shock protein DnaJ, cysteine-rich domain PF552_00180 IPR008971 HSP40/DnaJ peptide-binding PF552_00180 IPR018253 DnaJ domain, conserved site PF552_00180 IPR001623 DnaJ domain PF552_00180 IPR002939 Chaperone DnaJ, C-terminal PF552_00180 IPR012724 Chaperone DnaJ PF552_00180 IPR036869 Chaperone J-domain superfamily PF552_00190 IPR023940 Dihydrodipicolinate reductase PF552_00190 IPR000846 Dihydrodipicolinate reductase, N-terminal PF552_00190 IPR022664 Dihydrodipicolinate reductase, conserved site PF552_00190 IPR022663 Dihydrodipicolinate reductase, C-terminal PF552_00190 IPR036291 NAD(P)-binding domain superfamily PF552_00200 IPR036259 MFS transporter superfamily PF552_00200 IPR020846 Major facilitator superfamily domain PF552_00200 IPR011701 Major facilitator superfamily PF552_00205 IPR018170 Aldo/keto reductase, conserved site PF552_00205 IPR020471 Aldo/keto reductase PF552_00205 IPR036812 NADP-dependent oxidoreductase domain superfamily PF552_00205 IPR023210 NADP-dependent oxidoreductase domain PF552_00210 IPR000847 Transcription regulator HTH, LysR PF552_00210 IPR005119 LysR, substrate-binding PF552_00210 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_00210 IPR036390 Winged helix DNA-binding domain superfamily PF552_00225 IPR036390 Winged helix DNA-binding domain superfamily PF552_00225 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_00225 IPR004839 Aminotransferase, class I/classII PF552_00225 IPR015424 Pyridoxal phosphate-dependent transferase PF552_00225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_00225 IPR000524 Transcription regulator HTH, GntR PF552_00225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_00230 IPR013154 Alcohol dehydrogenase, N-terminal PF552_00230 IPR036291 NAD(P)-binding domain superfamily PF552_00230 IPR011032 GroES-like superfamily PF552_00230 IPR020843 Polyketide synthase, enoylreductase domain PF552_00230 IPR013149 Alcohol dehydrogenase, C-terminal PF552_00230 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PF552_00230 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PF552_00235 IPR005019 Methyladenine glycosylase PF552_00235 IPR011257 DNA glycosylase PF552_00235 IPR004597 DNA-3-methyladenine glycosylase I PF552_00250 IPR003265 HhH-GPD domain PF552_00250 IPR004036 Endonuclease III-like, conserved site-2 PF552_00250 IPR004035 Endonuclease III, iron-sulphur binding site PF552_00250 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif PF552_00250 IPR000445 Helix-hairpin-helix motif PF552_00250 IPR015797 NUDIX hydrolase-like domain superfamily PF552_00250 IPR011257 DNA glycosylase PF552_00250 IPR005760 A/G-specific adenine glycosylase MutY PF552_00250 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PF552_00250 IPR029119 MutY, C-terminal PF552_00265 IPR009760 Protein of unknown function DUF1328 PF552_00270 IPR008228 Uncharacterised conserved protein UCP006173 PF552_00270 IPR005358 Putative zinc- or iron-chelating domain containing protein PF552_00280 IPR000259 Fimbrial-type adhesion domain PF552_00280 IPR036937 Fimbrial-type adhesion domain superfamily PF552_00280 IPR008966 Adhesion domain superfamily PF552_00285 IPR013783 Immunoglobulin-like fold PF552_00285 IPR008962 PapD-like superfamily PF552_00285 IPR036316 Pili assembly chaperone, C-terminal domain superfamily PF552_00285 IPR001829 Pili assembly chaperone, bacterial PF552_00285 IPR016148 Pili assembly chaperone, C-terminal PF552_00285 IPR018046 Pili assembly chaperone, conserved site PF552_00285 IPR016147 Pili assembly chaperone, N-terminal PF552_00290 IPR000015 Outer membrane usher protein PF552_00290 IPR018030 Fimbrial membrane usher, conserved site PF552_00290 IPR042186 Outer membrane usher protein FimD, plug domain PF552_00290 IPR025949 PapC-like, C-terminal domain PF552_00290 IPR025885 PapC, N-terminal domain PF552_00290 IPR037224 PapC, N-terminal domain superfamily PF552_00305 IPR021886 MgsA AAA+ ATPase C-terminal PF552_00305 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PF552_00305 IPR003959 ATPase, AAA-type, core PF552_00305 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_00305 IPR003593 AAA+ ATPase domain PF552_00305 IPR032423 AAA C-terminal domain PF552_00310 IPR023271 Aquaporin-like PF552_00310 IPR000292 Formate/nitrite transporter PF552_00320 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase PF552_00320 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase PF552_00320 IPR018236 SAICAR synthetase, conserved site PF552_00320 IPR028923 SAICAR synthetase/ADE2, N-terminal PF552_00330 IPR013785 Aldolase-type TIM barrel PF552_00330 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA PF552_00330 IPR002220 DapA-like PF552_00330 IPR020625 Schiff base-forming aldolase, active site PF552_00330 IPR020624 Schiff base-forming aldolase, conserved site PF552_00335 IPR000868 Isochorismatase-like PF552_00335 IPR036380 Isochorismatase-like superfamily PF552_00340 IPR038770 Sodium/solute symporter superfamily PF552_00340 IPR004710 Bile acid:sodium symporter PF552_00340 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 PF552_00345 IPR002528 Multi antimicrobial extrusion protein PF552_00350 IPR007553 Domain of unknown function DUF523 PF552_00355 IPR037523 Vicinal oxygen chelate (VOC) domain PF552_00355 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PF552_00355 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PF552_00355 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal PF552_00355 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal PF552_00355 IPR005956 4-hydroxyphenylpyruvate dioxygenase PF552_00365 IPR037523 Vicinal oxygen chelate (VOC) domain PF552_00365 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PF552_00365 IPR022858 Metallothiol transferase FosB PF552_00365 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PF552_00370 IPR010987 Glutathione S-transferase, C-terminal-like PF552_00370 IPR040079 Glutathione Transferase family PF552_00370 IPR004045 Glutathione S-transferase, N-terminal PF552_00370 IPR004046 Glutathione S-transferase, C-terminal PF552_00370 IPR005955 Glutathione S-transferases, class Zeta PF552_00370 IPR034330 Glutathione S-transferases, class Zeta , C-terminal PF552_00370 IPR034333 Glutathione S-transferases, class Zeta , N-terminal PF552_00370 IPR036249 Thioredoxin-like superfamily PF552_00370 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PF552_00380 IPR004841 Amino acid permease/ SLC12A domain PF552_00380 IPR004840 Amino acid permease, conserved site PF552_00390 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PF552_00390 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_00390 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PF552_00400 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PF552_00400 IPR036390 Winged helix DNA-binding domain superfamily PF552_00400 IPR000524 Transcription regulator HTH, GntR PF552_00400 IPR011663 UbiC transcription regulator-associated PF552_00400 IPR010248 Histidine utilization repressor PF552_00400 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_00405 IPR014710 RmlC-like jelly roll fold PF552_00405 IPR011051 RmlC-like cupin domain superfamily PF552_00405 IPR010282 Uncharacterised protein family HutD/Ves PF552_00410 IPR035401 Urocanase, C-terminal domain PF552_00410 IPR038364 Urocanase, central domain superfamily PF552_00410 IPR023636 Urocanase conserved site PF552_00410 IPR035400 Urocanase, N-terminal domain PF552_00410 IPR035085 Urocanase, Rossmann-like domain PF552_00410 IPR036190 Urocanase superfamily PF552_00410 IPR023637 Urocanase PF552_00415 IPR001106 Aromatic amino acid lyase PF552_00415 IPR005921 Histidine ammonia-lyase PF552_00415 IPR008948 L-Aspartase-like PF552_00415 IPR022313 Phenylalanine/histidine ammonia-lyases, active site PF552_00415 IPR024083 Fumarase/histidase, N-terminal PF552_00420 IPR004840 Amino acid permease, conserved site PF552_00420 IPR004841 Amino acid permease/ SLC12A domain PF552_00425 IPR032466 Metal-dependent hydrolase PF552_00425 IPR006680 Amidohydrolase-related PF552_00425 IPR005920 Imidazolonepropionase PF552_00425 IPR011059 Metal-dependent hydrolase, composite domain superfamily PF552_00430 IPR005923 Formiminoglutamase PF552_00430 IPR006035 Ureohydrolase PF552_00430 IPR020855 Ureohydrolase, manganese-binding site PF552_00430 IPR023696 Ureohydrolase domain superfamily PF552_00445 IPR015942 Asp/Glu/hydantoin racemase PF552_00445 IPR001920 Asp/Glu racemase PF552_00445 IPR018187 Asp/Glu racemase, active site 1 PF552_00445 IPR033134 Asp/Glu racemase, active site 2 PF552_00445 IPR004391 Glutamate racemase PF552_00450 IPR001123 Amino acid exporter protein, LeuE-type PF552_00475 IPR017932 Glutamine amidotransferase type 2 domain PF552_00475 IPR035466 GlmS/AgaS, SIS domain 1 PF552_00475 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising PF552_00475 IPR029055 Nucleophile aminohydrolases, N-terminal PF552_00475 IPR001347 Sugar isomerase (SIS) PF552_00475 IPR035490 GlmS/FrlB, SIS domain 2 PF552_00480 IPR038009 GlmU, C-terminal LbH domain PF552_00480 IPR001451 Hexapeptide repeat PF552_00480 IPR018357 Hexapeptide transferase, conserved site PF552_00480 IPR025877 MobA-like NTP transferase PF552_00480 IPR029044 Nucleotide-diphospho-sugar transferases PF552_00480 IPR011004 Trimeric LpxA-like superfamily PF552_00480 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase PF552_00485 IPR026037 Phosphatidylglycerophosphatase A PF552_00485 IPR007686 YutG/PgpA domain PF552_00485 IPR036681 PgpA-like superfamily PF552_00490 IPR006283 Thiamine-monophosphate kinase PF552_00490 IPR036921 PurM-like, N-terminal domain superfamily PF552_00490 IPR016188 PurM-like, N-terminal domain PF552_00490 IPR036676 PurM-like, C-terminal domain superfamily PF552_00490 IPR010918 PurM-like, C-terminal domain PF552_00495 IPR006027 NusB/RsmB/TIM44 PF552_00495 IPR011605 NusB antitermination factor PF552_00495 IPR035926 NusB-like superfamily PF552_00500 IPR034964 Lumazine synthase PF552_00500 IPR036467 Lumazine/riboflavin synthase superfamily PF552_00500 IPR002180 Lumazine/riboflavin synthase PF552_00505 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PF552_00505 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB PF552_00505 IPR032677 GTP cyclohydrolase II PF552_00505 IPR036144 RibA-like superfamily PF552_00515 IPR036412 HAD-like superfamily PF552_00515 IPR002912 ACT domain PF552_00515 IPR023214 HAD superfamily PF552_00515 IPR023190 Phosphoserine phosphatase, domain 2 PF552_00530 IPR003732 D-aminoacyl-tRNA deacylase DTD PF552_00530 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily PF552_00535 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase PF552_00535 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain PF552_00535 IPR006406 Nicotinate phosphoribosyltransferase PF552_00535 IPR007229 Nicotinate phosphoribosyltransferase family PF552_00535 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal PF552_00540 IPR001307 Thiosulphate sulfurtransferase, conserved site PF552_00540 IPR036873 Rhodanese-like domain superfamily PF552_00540 IPR001763 Rhodanese-like domain PF552_00545 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 PF552_00545 IPR033177 Phosphatidylserine decarboxylase PF552_00545 IPR003817 Phosphatidylserine decarboxylase-related PF552_00555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_00555 IPR003594 Histidine kinase/HSP90-like ATPase PF552_00555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_00555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_00555 IPR021766 Phosphate regulon sensor protein PhoR PF552_00555 IPR013767 PAS fold PF552_00555 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR PF552_00555 IPR035965 PAS domain superfamily PF552_00555 IPR000014 PAS domain PF552_00555 IPR005467 Histidine kinase domain PF552_00555 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_00560 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB PF552_00560 IPR016032 Signal transduction response regulator, C-terminal effector PF552_00560 IPR001867 OmpR/PhoB-type DNA-binding domain PF552_00560 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_00560 IPR011006 CheY-like superfamily PF552_00560 IPR001789 Signal transduction response regulator, receiver domain PF552_00560 IPR039420 Transcriptional regulatory protein WalR-like PF552_00570 IPR036291 NAD(P)-binding domain superfamily PF552_00570 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_00570 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_00575 IPR002528 Multi antimicrobial extrusion protein PF552_00580 IPR004839 Aminotransferase, class I/classII PF552_00580 IPR015424 Pyridoxal phosphate-dependent transferase PF552_00580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_00580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_00585 IPR007383 Protein of unknown function DUF445 PF552_00600 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PF552_00600 IPR007370 Glutamate--cysteine ligase PF552_00600 IPR006334 Glutamate--cysteine ligase, monofunctional PF552_00605 IPR023380 DsbB-like superfamily PF552_00605 IPR022920 Disulphide bond formation protein DsbB PF552_00605 IPR003752 Disulphide bond formation protein DsbB/BdbC PF552_00625 IPR029058 Alpha/Beta hydrolase fold PF552_00625 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA PF552_00630 IPR003594 Histidine kinase/HSP90-like ATPase PF552_00630 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_00630 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_00630 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PF552_00630 IPR001241 DNA topoisomerase, type IIA PF552_00630 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PF552_00630 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal PF552_00630 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 PF552_00630 IPR018522 DNA topoisomerase, type IIA, conserved site PF552_00630 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative PF552_00630 IPR006171 TOPRIM domain PF552_00630 IPR002288 DNA gyrase B subunit, C-terminal PF552_00635 IPR011051 RmlC-like cupin domain superfamily PF552_00635 IPR007247 Ureidoglycolate lyase PF552_00635 IPR023525 Ureidoglycolate lyase, bacterial PF552_00635 IPR024060 Ureidoglycolate lyase domain superfamily PF552_00640 IPR005164 Allantoicase PF552_00640 IPR015908 Allantoicase domain PF552_00640 IPR008979 Galactose-binding-like domain superfamily PF552_00645 IPR002938 FAD-binding domain PF552_00645 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_00655 IPR006043 Xanthine/uracil/vitamin C permease PF552_00655 IPR017588 Uric acid permease UacT-like PF552_00655 IPR006042 Xanthine/uracil permease PF552_00660 IPR023416 Transthyretin/hydroxyisourate hydrolase domain PF552_00660 IPR023418 Transthyretin, thyroxine binding site PF552_00660 IPR023419 Transthyretin, conserved site PF552_00660 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily PF552_00660 IPR014306 Hydroxyisourate hydrolase PF552_00690 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PF552_00690 IPR003834 Cytochrome C biogenesis protein, transmembrane domain PF552_00690 IPR035671 DsbD gamma PF552_00690 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily PF552_00690 IPR022910 Thiol:disulphide interchange protein DsbD PF552_00690 IPR036249 Thioredoxin-like superfamily PF552_00690 IPR017937 Thioredoxin, conserved site PF552_00690 IPR013766 Thioredoxin domain PF552_00695 IPR000160 GGDEF domain PF552_00695 IPR029787 Nucleotide cyclase PF552_00695 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region PF552_00700 IPR002168 Lipase, GDXG, putative histidine active site PF552_00700 IPR033140 Lipase, GDXG, putative serine active site PF552_00700 IPR029058 Alpha/Beta hydrolase fold PF552_00700 IPR013094 Alpha/beta hydrolase fold-3 PF552_00710 IPR006660 Arsenate reductase-like PF552_00710 IPR036249 Thioredoxin-like superfamily PF552_00710 IPR006504 Transcriptional regulator Spx/MgsR PF552_00715 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PF552_00715 IPR005135 Endonuclease/exonuclease/phosphatase PF552_00715 IPR020847 AP endonuclease 1, binding site PF552_00715 IPR020848 AP endonuclease 1, conserved site PF552_00715 IPR004808 AP endonuclease 1 PF552_00720 IPR023031 Orotate phosphoribosyltransferase PF552_00720 IPR004467 Orotate phosphoribosyl transferase domain PF552_00720 IPR000836 Phosphoribosyltransferase domain PF552_00720 IPR029057 Phosphoribosyltransferase-like PF552_00725 IPR012910 TonB-dependent receptor, plug domain PF552_00725 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_00725 IPR039423 TonB-dependent receptor-like PF552_00725 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_00725 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_00725 IPR010105 TonB-dependent siderophore receptor PF552_00735 IPR016185 Pre-ATP-grasp domain superfamily PF552_00735 IPR004215 Prokaryotic glutathione synthetase, N-terminal PF552_00735 IPR004218 Prokaryotic glutathione synthetase, ATP-binding PF552_00735 IPR006284 Glutathione synthetase, prokaryotic PF552_00735 IPR011761 ATP-grasp fold PF552_00735 IPR013815 ATP-grasp fold, subdomain 1 PF552_00740 IPR006009 N-acetylglucosaminyltransferase, MurG PF552_00740 IPR007235 Glycosyl transferase, family 28, C-terminal PF552_00740 IPR004276 Glycosyltransferase family 28, N-terminal domain PF552_00745 IPR036565 Mur-like, catalytic domain superfamily PF552_00745 IPR004101 Mur ligase, C-terminal PF552_00745 IPR036615 Mur ligase, C-terminal domain superfamily PF552_00745 IPR013221 Mur ligase, central PF552_00745 IPR000713 Mur ligase, N-terminal catalytic domain PF552_00745 IPR005758 UDP-N-acetylmuramate--L-alanine ligase PF552_00750 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site PF552_00750 IPR005905 D-alanine--D-alanine ligase PF552_00750 IPR011127 D-alanine--D-alanine ligase, N-terminal domain PF552_00750 IPR016185 Pre-ATP-grasp domain superfamily PF552_00750 IPR011095 D-alanine--D-alanine ligase, C-terminal PF552_00750 IPR013815 ATP-grasp fold, subdomain 1 PF552_00750 IPR011761 ATP-grasp fold PF552_00755 IPR034746 POTRA domain PF552_00755 IPR013685 POTRA domain, FtsQ-type PF552_00755 IPR026579 Cell division protein FtsQ PF552_00755 IPR005548 Cell division protein FtsQ/DivIB PF552_00760 IPR020823 Cell division protein FtsA PF552_00760 IPR003494 SHS2 domain inserted in FtsA PF552_00765 IPR020805 Cell division protein FtsZ, conserved site PF552_00765 IPR024757 Cell division protein FtsZ, C-terminal PF552_00765 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PF552_00765 IPR036525 Tubulin/FtsZ, GTPase domain superfamily PF552_00765 IPR003008 Tubulin/FtsZ, GTPase domain PF552_00765 IPR008280 Tubulin/FtsZ, C-terminal PF552_00765 IPR000158 Cell division protein FtsZ PF552_00770 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase PF552_00770 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_00770 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal PF552_00770 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal PF552_00780 IPR011055 Duplicated hybrid motif PF552_00780 IPR016047 Peptidase M23 PF552_00785 IPR029061 Thiamin diphosphate-binding fold PF552_00785 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal PF552_00785 IPR004660 Pyruvate dehydrogenase E1 component PF552_00785 IPR041621 Pyruvate dehydrogenase E1 component, middle domain PF552_00785 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PF552_00785 IPR005474 Transketolase, N-terminal PF552_00790 IPR036625 E3-binding domain superfamily PF552_00790 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PF552_00790 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PF552_00790 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex PF552_00790 IPR000089 Biotin/lipoyl attachment PF552_00790 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PF552_00790 IPR011053 Single hybrid motif PF552_00790 IPR004167 Peripheral subunit-binding domain PF552_00800 IPR001727 Gdt1 family PF552_00805 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_00805 IPR039423 TonB-dependent receptor-like PF552_00805 IPR010916 TonB box, conserved site PF552_00805 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_00805 IPR010917 TonB-dependent receptor, conserved site PF552_00805 IPR010105 TonB-dependent siderophore receptor PF552_00805 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_00805 IPR012910 TonB-dependent receptor, plug domain PF552_00810 IPR029039 Flavoprotein-like superfamily PF552_00810 IPR008254 Flavodoxin/nitric oxide synthase PF552_00810 IPR002563 Flavin reductase like domain PF552_00810 IPR001226 Flavodoxin, conserved site PF552_00810 IPR001279 Metallo-beta-lactamase PF552_00810 IPR012349 FMN-binding split barrel PF552_00810 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_00815 IPR005358 Putative zinc- or iron-chelating domain containing protein PF552_00820 IPR001093 IMP dehydrogenase/GMP reductase PF552_00820 IPR013785 Aldolase-type TIM barrel PF552_00820 IPR005990 Inosine-5'-monophosphate dehydrogenase PF552_00820 IPR000644 CBS domain PF552_00820 IPR015875 IMP dehydrogenase / GMP reductase, conserved site PF552_00825 IPR006352 Phosphoglucosamine mutase, bacterial type PF552_00825 IPR016066 Alpha-D-phosphohexomutase, conserved site PF552_00825 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily PF552_00825 IPR005841 Alpha-D-phosphohexomutase superfamily PF552_00825 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III PF552_00825 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II PF552_00825 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III PF552_00825 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I PF552_00825 IPR005843 Alpha-D-phosphohexomutase, C-terminal PF552_00830 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal PF552_00830 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site PF552_00830 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative PF552_00830 IPR012349 FMN-binding split barrel PF552_00830 IPR000659 Pyridoxamine 5'-phosphate oxidase PF552_00835 IPR041122 RecJ, OB domain PF552_00835 IPR004610 Bacterial RecJ exonuclease PF552_00835 IPR003156 DHHA1 domain PF552_00835 IPR038763 DHH phosphoesterase superfamily PF552_00835 IPR001667 DDH domain PF552_00860 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PF552_00860 IPR013785 Aldolase-type TIM barrel PF552_00865 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal PF552_00865 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily PF552_00865 IPR039901 3-deoxy-D-manno-octulosonic acid transferase PF552_00870 IPR029028 Alpha/beta knot methyltransferases PF552_00870 IPR006700 Ribosomal RNA small subunit methyltransferase E PF552_00870 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PF552_00875 IPR023408 Mechanosensitive ion channel MscS domain superfamily PF552_00875 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PF552_00875 IPR006686 Mechanosensitive ion channel MscS, conserved site PF552_00875 IPR011066 Mechanosensitive ion channel MscS, C-terminal PF552_00875 IPR006685 Mechanosensitive ion channel MscS PF552_00875 IPR010920 LSM domain superfamily PF552_00885 IPR020845 AMP-binding, conserved site PF552_00885 IPR042099 AMP-dependent synthetase-like superfamily PF552_00885 IPR000873 AMP-dependent synthetase/ligase PF552_00885 IPR011904 Acetate-CoA ligase PF552_00885 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain PF552_00885 IPR025110 AMP-binding enzyme, C-terminal domain PF552_00890 IPR036380 Isochorismatase-like superfamily PF552_00890 IPR000868 Isochorismatase-like PF552_00895 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PF552_00895 IPR000485 AsnC-type HTH domain PF552_00895 IPR036390 Winged helix DNA-binding domain superfamily PF552_00895 IPR019888 Transcription regulator AsnC-type PF552_00895 IPR011008 Dimeric alpha-beta barrel PF552_00895 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_00900 IPR036661 Luciferase-like domain superfamily PF552_00900 IPR011251 Luciferase-like domain PF552_00900 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG PF552_00905 IPR005025 NADPH-dependent FMN reductase-like PF552_00905 IPR029039 Flavoprotein-like superfamily PF552_00905 IPR019912 FMN reductase, MsuE-like PF552_00910 IPR011006 CheY-like superfamily PF552_00910 IPR016032 Signal transduction response regulator, C-terminal effector PF552_00910 IPR001789 Signal transduction response regulator, receiver domain PF552_00910 IPR000792 Transcription regulator LuxR, C-terminal PF552_00920 IPR001789 Signal transduction response regulator, receiver domain PF552_00920 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PF552_00920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_00920 IPR037952 Sensor histidine kinase TorS, sensor domain PF552_00920 IPR036641 HPT domain superfamily PF552_00920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_00920 IPR005467 Histidine kinase domain PF552_00920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_00920 IPR038188 TorS, sensor domain superfamily PF552_00920 IPR003660 HAMP domain PF552_00920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_00920 IPR003594 Histidine kinase/HSP90-like ATPase PF552_00920 IPR011006 CheY-like superfamily PF552_00925 IPR007436 Protein of unknown function DUF485 PF552_00930 IPR018212 Sodium/solute symporter, conserved site PF552_00930 IPR001734 Sodium/solute symporter PF552_00930 IPR038377 Sodium/glucose symporter superfamily PF552_00930 IPR014083 Cation/acetate symporter ActP PF552_00940 IPR000060 BCCT transporter family PF552_00940 IPR018093 BCCT transporter, conserved site PF552_00950 IPR029787 Nucleotide cyclase PF552_00950 IPR000160 GGDEF domain PF552_00960 IPR004602 UvrABC system subunit A PF552_00960 IPR041102 UvrA, interaction domain PF552_00960 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_00960 IPR003439 ABC transporter-like PF552_00960 IPR041552 UvrA DNA-binding domain PF552_00960 IPR017871 ABC transporter, conserved site PF552_00965 IPR011075 Tetracyclin repressor-like, C-terminal domain PF552_00965 IPR001647 DNA-binding HTH domain, TetR-type PF552_00965 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PF552_00965 IPR009057 Homeobox-like domain superfamily PF552_00970 IPR020843 Polyketide synthase, enoylreductase domain PF552_00970 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site PF552_00970 IPR011032 GroES-like superfamily PF552_00970 IPR013154 Alcohol dehydrogenase, N-terminal PF552_00970 IPR013149 Alcohol dehydrogenase, C-terminal PF552_00970 IPR036291 NAD(P)-binding domain superfamily PF552_00980 IPR009707 Membrane protein GlpM/YdgC PF552_00985 IPR016084 Haem oxygenase-like, multi-helical PF552_00985 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase PF552_00985 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase PF552_00985 IPR029056 Ribokinase-like PF552_00985 IPR004305 Thiaminase-2/PQQC PF552_00985 IPR022998 Thiamine phosphate synthase/TenI PF552_00985 IPR034291 Thiamine phosphate synthase PF552_00985 IPR013785 Aldolase-type TIM barrel PF552_00985 IPR036206 Thiamin phosphate synthase superfamily PF552_00995 IPR036259 MFS transporter superfamily PF552_00995 IPR020846 Major facilitator superfamily domain PF552_00995 IPR011701 Major facilitator superfamily PF552_01000 IPR000424 Primosome PriB/single-strand DNA-binding PF552_01000 IPR012340 Nucleic acid-binding, OB-fold PF552_01000 IPR011344 Single-stranded DNA-binding protein PF552_01005 IPR006144 Secretion protein HlyD, conserved site PF552_01005 IPR010129 Type I secretion membrane fusion protein, HlyD family PF552_01005 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PF552_01010 IPR005074 Peptidase C39, bacteriocin processing PF552_01010 IPR003593 AAA+ ATPase domain PF552_01010 IPR011527 ABC transporter type 1, transmembrane domain PF552_01010 IPR036640 ABC transporter type 1, transmembrane domain superfamily PF552_01010 IPR003439 ABC transporter-like PF552_01010 IPR017871 ABC transporter, conserved site PF552_01010 IPR033838 Colicin V processing peptidase PF552_01010 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_01010 IPR039421 Type I protein exporter PF552_01035 IPR004471 Branched-chain amino acid transport, AzlC PF552_01035 IPR011606 Branched-chain amino acid transport, permease PF552_01045 IPR011265 GABA permease PF552_01045 IPR004840 Amino acid permease, conserved site PF552_01045 IPR004841 Amino acid permease/ SLC12A domain PF552_01050 IPR036390 Winged helix DNA-binding domain superfamily PF552_01050 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_01050 IPR000524 Transcription regulator HTH, GntR PF552_01050 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_01050 IPR015424 Pyridoxal phosphate-dependent transferase PF552_01050 IPR004839 Aminotransferase, class I/classII PF552_01055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_01055 IPR015424 Pyridoxal phosphate-dependent transferase PF552_01055 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_01055 IPR004632 4-aminobutyrate aminotransferase, bacterial PF552_01055 IPR005814 Aminotransferase class-III PF552_01060 IPR010102 Succinate semialdehyde dehydrogenase PF552_01060 IPR015590 Aldehyde dehydrogenase domain PF552_01060 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_01060 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_01060 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_01060 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_01060 IPR016161 Aldehyde/histidinol dehydrogenase PF552_01065 IPR036390 Winged helix DNA-binding domain superfamily PF552_01065 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_01065 IPR000847 Transcription regulator HTH, LysR PF552_01070 IPR036380 Isochorismatase-like superfamily PF552_01070 IPR000868 Isochorismatase-like PF552_01075 IPR003829 Pirin, N-terminal domain PF552_01075 IPR012093 Pirin PF552_01075 IPR008778 Pirin, C-terminal domain PF552_01075 IPR014710 RmlC-like jelly roll fold PF552_01075 IPR011051 RmlC-like cupin domain superfamily PF552_01080 IPR002937 Amine oxidase PF552_01080 IPR014105 Carotenoid/retinoid oxidoreductase PF552_01080 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_01095 IPR009057 Homeobox-like domain superfamily PF552_01095 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PF552_01095 IPR020449 Transcription regulator HTH, AraC- type PF552_01095 IPR018060 DNA binding HTH domain, AraC-type PF552_01105 IPR011701 Major facilitator superfamily PF552_01105 IPR020846 Major facilitator superfamily domain PF552_01105 IPR036259 MFS transporter superfamily PF552_01105 IPR005829 Sugar transporter, conserved site PF552_01110 IPR036390 Winged helix DNA-binding domain superfamily PF552_01110 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_01110 IPR000847 Transcription regulator HTH, LysR PF552_01110 IPR005119 LysR, substrate-binding PF552_01115 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PF552_01115 IPR022831 Multidrug resistance protein MdtB PF552_01115 IPR001036 Acriflavin resistance protein PF552_01120 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PF552_01120 IPR006143 RND efflux pump, membrane fusion protein PF552_01125 IPR009057 Homeobox-like domain superfamily PF552_01125 IPR001647 DNA-binding HTH domain, TetR-type PF552_01125 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PF552_01145 IPR023210 NADP-dependent oxidoreductase domain PF552_01145 IPR018170 Aldo/keto reductase, conserved site PF552_01145 IPR020471 Aldo/keto reductase PF552_01145 IPR036812 NADP-dependent oxidoreductase domain superfamily PF552_01150 IPR023699 Transcription activator HTH, RhaR PF552_01150 IPR014710 RmlC-like jelly roll fold PF552_01150 IPR018060 DNA binding HTH domain, AraC-type PF552_01150 IPR018062 HTH domain AraC-type, conserved site PF552_01150 IPR009057 Homeobox-like domain superfamily PF552_01150 IPR003313 AraC-type arabinose-binding/dimerisation domain PF552_01150 IPR020449 Transcription regulator HTH, AraC- type PF552_01150 IPR037923 Transcription regulator HTH-like PF552_01180 IPR036390 Winged helix DNA-binding domain superfamily PF552_01180 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_01180 IPR002577 Helix-turn-helix, HxlR type PF552_01180 IPR011991 ArsR-like helix-turn-helix domain PF552_01185 IPR003680 Flavodoxin-like fold PF552_01185 IPR029039 Flavoprotein-like superfamily PF552_01215 IPR023051 Potassium uptake protein, low affinity, Kup PF552_01215 IPR003855 Potassium transporter PF552_01240 IPR000425 Major intrinsic protein PF552_01240 IPR023743 Aquaporin Z PF552_01240 IPR034294 Aquaporin transporter PF552_01240 IPR023271 Aquaporin-like PF552_01240 IPR022357 Major intrinsic protein, conserved site PF552_01255 IPR013785 Aldolase-type TIM barrel PF552_01255 IPR004651 Histidine biosynthesis, HisF PF552_01255 IPR006062 Histidine biosynthesis PF552_01255 IPR011060 Ribulose-phosphate binding barrel PF552_01260 IPR002575 Aminoglycoside phosphotransferase PF552_01260 IPR005280 Homoserine kinase, type II PF552_01260 IPR011009 Protein kinase-like domain superfamily PF552_01275 IPR007138 Antibiotic biosynthesis monooxygenase domain PF552_01275 IPR011008 Dimeric alpha-beta barrel PF552_01290 IPR039421 Type I protein exporter PF552_01290 IPR003439 ABC transporter-like PF552_01290 IPR036640 ABC transporter type 1, transmembrane domain superfamily PF552_01290 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_01290 IPR011527 ABC transporter type 1, transmembrane domain PF552_01290 IPR003593 AAA+ ATPase domain PF552_01290 IPR017871 ABC transporter, conserved site PF552_01295 IPR011060 Ribulose-phosphate binding barrel PF552_01295 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase PF552_01295 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA PF552_01295 IPR006062 Histidine biosynthesis PF552_01295 IPR013785 Aldolase-type TIM barrel PF552_01310 IPR029062 Class I glutamine amidotransferase-like PF552_01310 IPR010139 Imidazole glycerol phosphate synthase, subunit H PF552_01310 IPR017926 Glutamine amidotransferase PF552_01315 IPR000807 Imidazoleglycerol-phosphate dehydratase PF552_01315 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site PF552_01315 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_01315 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily PF552_01335 IPR023072 Acetyltransferase, YpeA PF552_01335 IPR017255 Acetyltransferase, GNAT, predicted PF552_01335 IPR016181 Acyl-CoA N-acyltransferase PF552_01335 IPR000182 GNAT domain PF552_01340 IPR017821 Succinate CoA transferase PF552_01340 IPR037171 NagB/RpiA transferase-like PF552_01340 IPR003702 Acetyl-CoA hydrolase/transferase PF552_01340 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily PF552_01340 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PF552_01350 IPR003594 Histidine kinase/HSP90-like ATPase PF552_01350 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_01350 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_01350 IPR003660 HAMP domain PF552_01350 IPR005467 Histidine kinase domain PF552_01350 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_01350 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_01355 IPR016032 Signal transduction response regulator, C-terminal effector PF552_01355 IPR001867 OmpR/PhoB-type DNA-binding domain PF552_01355 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_01355 IPR011006 CheY-like superfamily PF552_01355 IPR039420 Transcriptional regulatory protein WalR-like PF552_01355 IPR001789 Signal transduction response regulator, receiver domain PF552_01360 IPR041692 HHH domain 9 PF552_01360 IPR010994 RuvA domain 2-like PF552_01360 IPR022967 RNA-binding domain, S1 PF552_01360 IPR003029 S1 domain PF552_01360 IPR023323 Tex-like domain superfamily PF552_01360 IPR023319 Tex-like protein, HTH domain superfamily PF552_01360 IPR018974 Tex-like protein, N-terminal PF552_01360 IPR032639 Tex protein, YqgF-like domain PF552_01360 IPR006641 YqgF/RNase H-like domain PF552_01360 IPR012340 Nucleic acid-binding, OB-fold PF552_01360 IPR012337 Ribonuclease H-like superfamily PF552_01360 IPR037027 YqgF/RNase H-like domain superfamily PF552_01365 IPR011547 SLC26A/SulP transporter domain PF552_01365 IPR036513 STAS domain superfamily PF552_01365 IPR002645 STAS domain PF552_01365 IPR001902 SLC26A/SulP transporter PF552_01370 IPR036291 NAD(P)-binding domain superfamily PF552_01370 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_01370 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_01375 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_01375 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme PF552_01375 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase PF552_01375 IPR015424 Pyridoxal phosphate-dependent transferase PF552_01375 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_01380 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_01380 IPR022374 Energy-dependent translational throttle protein EttA PF552_01380 IPR017871 ABC transporter, conserved site PF552_01380 IPR003593 AAA+ ATPase domain PF552_01380 IPR032781 ABC-transporter extension domain PF552_01380 IPR003439 ABC transporter-like PF552_01405 IPR006143 RND efflux pump, membrane fusion protein PF552_01405 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB PF552_01405 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PF552_01410 IPR001036 Acriflavin resistance protein PF552_01410 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PF552_01410 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA PF552_01415 IPR002524 Cation efflux protein PF552_01415 IPR036837 Cation efflux protein, cytoplasmic domain superfamily PF552_01415 IPR027469 Cation efflux transmembrane domain superfamily PF552_01445 IPR004841 Amino acid permease/ SLC12A domain PF552_01445 IPR004840 Amino acid permease, conserved site PF552_01460 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PF552_01460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_01460 IPR033910 Glutamyl-tRNA synthetase PF552_01460 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial PF552_01460 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PF552_01460 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 PF552_01460 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding PF552_01460 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PF552_01470 IPR000957 Sulphate/thiosulphate-binding, conserved site PF552_01470 IPR034408 Sulphate/thiosulphate-binding site PF552_01470 IPR005669 Thiosulphate/Sulfate-binding protein PF552_01475 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily PF552_01475 IPR002903 Ribosomal RNA small subunit methyltransferase H PF552_01475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_01485 IPR036138 Penicillin-binding protein, dimerisation domain superfamily PF552_01485 IPR037532 Peptidoglycan D,D-transpeptidase FtsI PF552_01485 IPR005311 Penicillin-binding protein, dimerisation domain PF552_01485 IPR012338 Beta-lactamase/transpeptidase-like PF552_01485 IPR001460 Penicillin-binding protein, transpeptidase PF552_01490 IPR035911 MurE/MurF, N-terminal PF552_01490 IPR036565 Mur-like, catalytic domain superfamily PF552_01490 IPR004101 Mur ligase, C-terminal PF552_01490 IPR036615 Mur ligase, C-terminal domain superfamily PF552_01490 IPR013221 Mur ligase, central PF552_01490 IPR000713 Mur ligase, N-terminal catalytic domain PF552_01490 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase PF552_01495 IPR000713 Mur ligase, N-terminal catalytic domain PF552_01495 IPR013221 Mur ligase, central PF552_01495 IPR036615 Mur ligase, C-terminal domain superfamily PF552_01495 IPR004101 Mur ligase, C-terminal PF552_01495 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase PF552_01495 IPR036565 Mur-like, catalytic domain superfamily PF552_01495 IPR035911 MurE/MurF, N-terminal PF552_01500 IPR000715 Glycosyl transferase, family 4 PF552_01500 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site PF552_01500 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase PF552_01510 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted PF552_01510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_01510 IPR025714 Methyltransferase domain PF552_01515 IPR036950 Penicillin binding protein transglycosylase domain PF552_01515 IPR012338 Beta-lactamase/transpeptidase-like PF552_01515 IPR001264 Glycosyl transferase, family 51 PF552_01515 IPR023346 Lysozyme-like domain superfamily PF552_01515 IPR001460 Penicillin-binding protein, transpeptidase PF552_01515 IPR031376 Penicillin-binding protein, OB-like domain PF552_01525 IPR003494 SHS2 domain inserted in FtsA PF552_01525 IPR005883 Type IV pilus assembly protein PilM PF552_01530 IPR007813 Fimbrial assembly PilN PF552_01535 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PF552_01535 IPR007445 Pilus assembly protein, PilO PF552_01550 IPR023000 Shikimate kinase, conserved site PF552_01550 IPR000623 Shikimate kinase/Threonine synthase-like 1 PF552_01550 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_01550 IPR031322 Shikimate kinase/gluconokinase PF552_01555 IPR030960 3-dehydroquinate synthase domain PF552_01555 IPR030963 3-dehydroquinate synthase family PF552_01555 IPR016037 3-dehydroquinate synthase AroB PF552_01565 IPR013785 Aldolase-type TIM barrel PF552_01565 IPR017932 Glutamine amidotransferase type 2 domain PF552_01565 IPR002489 Glutamate synthase, alpha subunit, C-terminal PF552_01565 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily PF552_01565 IPR006982 Glutamate synthase, central-N PF552_01565 IPR002932 Glutamate synthase domain PF552_01565 IPR029055 Nucleophile aminohydrolases, N-terminal PF552_01570 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 PF552_01570 IPR023753 FAD/NAD(P)-binding domain PF552_01570 IPR028261 Dihydroprymidine dehydrogenase domain II PF552_01570 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_01570 IPR009051 Alpha-helical ferredoxin PF552_01580 IPR007156 LemA PF552_01580 IPR023353 LemA-like domain superfamily PF552_01585 IPR007621 TPM domain PF552_01595 IPR001082 Fimbrial protein pilin PF552_01595 IPR012902 Prokaryotic N-terminal methylation site PF552_01600 IPR007016 O-antigen ligase-related PF552_01600 IPR031726 Protein glycosylation ligase domain PF552_01600 IPR021797 Virulence factor membrane-bound polymerase, C-terminal PF552_01605 IPR002024 Bacterioferritin PF552_01605 IPR012347 Ferritin-like PF552_01605 IPR009040 Ferritin-like diiron domain PF552_01605 IPR009078 Ferritin-like superfamily PF552_01605 IPR008331 Ferritin/DPS protein domain PF552_01610 IPR007419 BFD-like [2Fe-2S]-binding domain PF552_01610 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily PF552_01615 IPR019897 RidA, conserved site PF552_01615 IPR035959 RutC-like superfamily PF552_01615 IPR006175 YjgF/YER057c/UK114 family PF552_01615 IPR006056 RidA family PF552_01620 IPR033655 RelA, TGS domain PF552_01620 IPR012676 TGS-like PF552_01620 IPR004095 TGS PF552_01620 IPR004811 RelA/SpoT family PF552_01620 IPR012675 Beta-grasp domain superfamily PF552_01620 IPR007685 RelA/SpoT PF552_01620 IPR003607 HD/PDEase domain PF552_01620 IPR002912 ACT domain PF552_01630 IPR006110 RNA polymerase, subunit omega/K/RPB6 PF552_01630 IPR012293 RNA polymerase subunit, RPB6/omega PF552_01630 IPR036161 RPB6/omega subunit-like superfamily PF552_01630 IPR003716 DNA-directed RNA polymerase, omega subunit PF552_01635 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PF552_01635 IPR008144 Guanylate kinase-like domain PF552_01635 IPR020590 Guanylate kinase, conserved site PF552_01635 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_01635 IPR017665 Guanylate kinase PF552_01640 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase PF552_01685 IPR000307 Ribosomal protein S16 PF552_01685 IPR020592 Ribosomal protein S16, conserved site PF552_01685 IPR023803 Ribosomal protein S16 domain superfamily PF552_01690 IPR036976 RimM, N-terminal domain superfamily PF552_01690 IPR002676 RimM, N-terminal PF552_01690 IPR011033 PRC-barrel-like superfamily PF552_01690 IPR027275 PRC-barrel domain PF552_01690 IPR011961 16S rRNA processing protein RimM PF552_01690 IPR009000 Translation protein, beta-barrel domain superfamily PF552_01695 IPR029028 Alpha/beta knot methyltransferases PF552_01695 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria PF552_01695 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal PF552_01695 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PF552_01695 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain PF552_01700 IPR018257 Ribosomal protein L19, conserved site PF552_01700 IPR008991 Translation protein SH3-like domain superfamily PF552_01700 IPR001857 Ribosomal protein L19 PF552_01700 IPR038657 Ribosomal protein L19 superfamily PF552_01705 IPR029058 Alpha/Beta hydrolase fold PF552_01705 IPR000073 Alpha/beta hydrolase fold-1 PF552_01710 IPR004961 Lipase chaperone PF552_01715 IPR020103 Pseudouridine synthase, catalytic domain superfamily PF552_01715 IPR002501 Pseudouridine synthase II, N-terminal PF552_01715 IPR015947 PUA-like superfamily PF552_01715 IPR014780 tRNA pseudouridine synthase II, TruB PF552_01715 IPR032819 tRNA pseudouridylate synthase B, C-terminal PF552_01715 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal PF552_01720 IPR002781 Transmembrane protein TauE-like PF552_01730 IPR000620 EamA domain PF552_01735 IPR000620 EamA domain PF552_01740 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PF552_01740 IPR002912 ACT domain PF552_01740 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF552_01740 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PF552_01740 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PF552_01740 IPR036291 NAD(P)-binding domain superfamily PF552_01745 IPR006094 FAD linked oxidase, N-terminal PF552_01745 IPR004490 Glycolate oxidase subunit GlcD PF552_01745 IPR004113 FAD-linked oxidase, C-terminal PF552_01745 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PF552_01745 IPR036318 FAD-binding, type PCMH-like superfamily PF552_01745 IPR016166 FAD-binding domain, PCMH-type PF552_01745 IPR016164 FAD-linked oxidase-like, C-terminal PF552_01755 IPR007138 Antibiotic biosynthesis monooxygenase domain PF552_01755 IPR011008 Dimeric alpha-beta barrel PF552_01760 IPR003680 Flavodoxin-like fold PF552_01760 IPR029039 Flavoprotein-like superfamily PF552_01770 IPR005829 Sugar transporter, conserved site PF552_01770 IPR011701 Major facilitator superfamily PF552_01770 IPR020846 Major facilitator superfamily domain PF552_01770 IPR036259 MFS transporter superfamily PF552_01775 IPR032692 Integral membrane protein YccS, N-terminal PF552_01775 IPR010020 Integral membrane protein, YccS/YhfK PF552_01775 IPR010019 Integral membrane protein, YccS PF552_01780 IPR018152 Superoxide dismutase, copper/zinc, binding site PF552_01780 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily PF552_01780 IPR001424 Superoxide dismutase, copper/zinc binding domain PF552_01780 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone PF552_01785 IPR002549 Transmembrane protein TqsA-like PF552_01790 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_01790 IPR025669 AAA domain PF552_01810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_01810 IPR013216 Methyltransferase type 11 PF552_01820 IPR004840 Amino acid permease, conserved site PF552_01820 IPR004841 Amino acid permease/ SLC12A domain PF552_01825 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase PF552_01825 IPR033524 Leu/Phe/Val dehydrogenases active site PF552_01825 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal PF552_01825 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain PF552_01825 IPR014362 Glutamate dehydrogenase PF552_01825 IPR036291 NAD(P)-binding domain superfamily PF552_01825 IPR033922 NAD(P) binding domain of glutamate dehydrogenase PF552_01830 IPR004636 Acetylornithine/Succinylornithine transaminase family PF552_01830 IPR026330 Succinylornithine transaminase PF552_01830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_01830 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_01830 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria PF552_01830 IPR005814 Aminotransferase class-III PF552_01830 IPR015424 Pyridoxal phosphate-dependent transferase PF552_01835 IPR007041 Arginine N-succinyltransferase AstA/AruG PF552_01835 IPR016181 Acyl-CoA N-acyltransferase PF552_01835 IPR017650 Arginine N-succinyltransferase PF552_01840 IPR017649 Succinylglutamate-semialdehyde dehydrogenase PF552_01840 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_01840 IPR015590 Aldehyde dehydrogenase domain PF552_01840 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_01840 IPR016161 Aldehyde/histidinol dehydrogenase PF552_01840 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_01840 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_01845 IPR037031 Succinylarginine dihydrolase superfamily PF552_01845 IPR007079 Succinylarginine dihydrolase PF552_01850 IPR007036 Succinylglutamate desuccinylase/aspartoacylase PF552_01850 IPR016681 Succinylglutamate desuccinylase PF552_01865 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily PF552_01865 IPR000209 Peptidase S8/S53 domain PF552_01865 IPR036852 Peptidase S8/S53 domain superfamily PF552_01865 IPR023827 Peptidase S8, subtilisin, Asp-active site PF552_01865 IPR022398 Peptidase S8, subtilisin, His-active site PF552_01865 IPR023828 Peptidase S8, subtilisin, Ser-active site PF552_01865 IPR015500 Peptidase S8, subtilisin-related PF552_01865 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 PF552_01865 IPR034202 Subtilisin Carlsberg-like catalytic domain PF552_01880 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_01880 IPR000847 Transcription regulator HTH, LysR PF552_01880 IPR005119 LysR, substrate-binding PF552_01880 IPR036390 Winged helix DNA-binding domain superfamily PF552_01885 IPR000620 EamA domain PF552_01900 IPR008909 DALR anticodon binding PF552_01900 IPR015944 Glycine-tRNA ligase, beta subunit PF552_01900 IPR006194 Glycine-tRNA synthetase, heterodimeric PF552_01905 IPR006194 Glycine-tRNA synthetase, heterodimeric PF552_01905 IPR002310 Glycine-tRNA ligase, alpha subunit PF552_01930 IPR000644 CBS domain PF552_01935 IPR007168 Phage shock protein, PspC, N-terminal PF552_01945 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_01945 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PF552_01945 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_01945 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_01945 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_01945 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_01945 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_01955 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PF552_01955 IPR041121 SDH, C-terminal PF552_01955 IPR036291 NAD(P)-binding domain superfamily PF552_01955 IPR011342 Shikimate dehydrogenase PF552_01955 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal PF552_01955 IPR022893 Shikimate dehydrogenase family PF552_01960 IPR018375 Coproporphyrinogen III oxidase, conserved site PF552_01960 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily PF552_01960 IPR001260 Coproporphyrinogen III oxidase, aerobic PF552_01965 IPR032677 GTP cyclohydrolase II PF552_01965 IPR000926 GTP cyclohydrolase II, RibA PF552_01965 IPR036144 RibA-like superfamily PF552_01970 IPR005477 Deoxyxylulose-5-phosphate synthase PF552_01970 IPR029061 Thiamin diphosphate-binding fold PF552_01970 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PF552_01970 IPR005475 Transketolase-like, pyrimidine-binding domain PF552_01970 IPR020826 Transketolase binding site PF552_01970 IPR033248 Transketolase, C-terminal domain PF552_01975 IPR022337 Inositol monophosphatase, SuhB PF552_01975 IPR033942 Inositol monophosphatase PF552_01975 IPR020583 Inositol monophosphatase, metal-binding site PF552_01975 IPR000760 Inositol monophosphatase-like PF552_01975 IPR020550 Inositol monophosphatase, conserved site PF552_01980 IPR021046 Cold-shock protein, DEAD box A, C-terminal PF552_01980 IPR034415 CsdA, RNA recognition motif PF552_01980 IPR011545 DEAD/DEAH box helicase domain PF552_01980 IPR001650 Helicase, C-terminal PF552_01980 IPR028618 ATP-dependent RNA helicase DeaD PF552_01980 IPR014014 RNA helicase, DEAD-box type, Q motif PF552_01980 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_01980 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PF552_01980 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain PF552_01980 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PF552_01980 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_01990 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_01990 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl PF552_01990 IPR003593 AAA+ ATPase domain PF552_01990 IPR003439 ABC transporter-like PF552_01990 IPR017871 ABC transporter, conserved site PF552_01995 IPR030802 ABC transporter permease MalE PF552_01995 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PF552_02005 IPR042245 Tgt2/MlaC superfamily PF552_02005 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PF552_02015 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB PF552_02015 IPR004488 Magnesium/cobalt transport protein CorA PF552_02020 IPR031100 LOG family PF552_02020 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PF552_02025 IPR020476 NUDIX hydrolase PF552_02025 IPR020084 NUDIX hydrolase, conserved site PF552_02025 IPR015797 NUDIX hydrolase-like domain superfamily PF552_02025 IPR000086 NUDIX hydrolase domain PF552_02030 IPR000836 Phosphoribosyltransferase domain PF552_02030 IPR005222 Competence protein ComF PF552_02030 IPR029057 Phosphoribosyltransferase-like PF552_02035 IPR004609 ATP-dependent DNA helicase RecG PF552_02035 IPR011545 DEAD/DEAH box helicase domain PF552_02035 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_02035 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_02035 IPR001650 Helicase, C-terminal PF552_02035 IPR012340 Nucleic acid-binding, OB-fold PF552_02035 IPR033454 RecG, wedge domain PF552_02045 IPR038404 TRAP transporter solute receptor DctP superfamily PF552_02050 IPR002123 Phospholipid/glycerol acyltransferase PF552_02050 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB PF552_02050 IPR041728 GPAT/DHAPAT, acyltransferase domain PF552_02050 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase PF552_02055 IPR029069 HotDog domain superfamily PF552_02055 IPR003703 Acyl-CoA thioesterase PF552_02060 IPR033380 Glutamate-aspartate symport protein GltP/GltT PF552_02060 IPR034703 Proton/glutamate-aspartate symporter GltP PF552_02060 IPR018107 Sodium:dicarboxylate symporter, conserved site PF552_02060 IPR036458 Sodium:dicarboxylate symporter superfamily PF552_02060 IPR001991 Sodium:dicarboxylate symporter PF552_02070 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC PF552_02070 IPR030393 EngB-type guanine nucleotide-binding (G) domain PF552_02070 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_02070 IPR006073 GTP binding domain PF552_02075 IPR036390 Winged helix DNA-binding domain superfamily PF552_02075 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_02075 IPR023761 Transcriptional repressor HTH, NsrR PF552_02075 IPR000944 Transcription regulator Rrf2-type PF552_02075 IPR030489 Transcription regulator Rrf2-type, conserved site PF552_02080 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PF552_02080 IPR009050 Globin-like superfamily PF552_02080 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_02080 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_02080 IPR000971 Globin PF552_02080 IPR017938 Riboflavin synthase-like beta-barrel PF552_02080 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_02080 IPR023950 Flavohemoprotein PF552_02080 IPR012292 Globin/Protoglobin PF552_02095 IPR017926 Glutamine amidotransferase PF552_02095 IPR029062 Class I glutamine amidotransferase-like PF552_02100 IPR001848 Ribosomal protein S10 PF552_02100 IPR036838 Ribosomal protein S10 domain superfamily PF552_02100 IPR027486 Ribosomal protein S10 domain PF552_02100 IPR018268 Ribosomal protein S10, conserved site PF552_02105 IPR009000 Translation protein, beta-barrel domain superfamily PF552_02105 IPR019927 Ribosomal protein L3, bacterial/organelle-type PF552_02105 IPR019926 Ribosomal protein L3, conserved site PF552_02105 IPR000597 Ribosomal protein L3 PF552_02110 IPR002136 Ribosomal protein L4/L1e PF552_02110 IPR023574 Ribosomal protein L4 domain superfamily PF552_02110 IPR013005 50S ribosomal protein uL4 PF552_02115 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PF552_02115 IPR012678 Ribosomal protein L23/L15e core domain superfamily PF552_02115 IPR013025 Ribosomal protein L25/L23 PF552_02120 IPR014726 Ribosomal protein L2, domain 3 PF552_02120 IPR012340 Nucleic acid-binding, OB-fold PF552_02120 IPR022666 Ribosomal Proteins L2, RNA binding domain PF552_02120 IPR014722 Ribosomal protein L2, domain 2 PF552_02120 IPR002171 Ribosomal protein L2 PF552_02120 IPR005880 Ribosomal protein L2, bacterial/organellar-type PF552_02120 IPR022669 Ribosomal protein L2, C-terminal PF552_02120 IPR008991 Translation protein SH3-like domain superfamily PF552_02125 IPR020934 Ribosomal protein S19 conserved site PF552_02125 IPR005732 Ribosomal protein S19, bacterial-type PF552_02125 IPR023575 Ribosomal protein S19, superfamily PF552_02125 IPR002222 Ribosomal protein S19/S15 PF552_02130 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type PF552_02130 IPR001063 Ribosomal protein L22/L17 PF552_02130 IPR018260 Ribosomal protein L22/L17, conserved site PF552_02130 IPR036394 Ribosomal protein L22/L17 superfamily PF552_02140 IPR020798 Ribosomal protein L16, conserved site PF552_02140 IPR000114 Ribosomal protein L16 PF552_02140 IPR036920 Ribosomal protein L10e/L16 superfamily PF552_02140 IPR016180 Ribosomal protein L10e/L16 PF552_02145 IPR036049 Ribosomal protein L29/L35 superfamily PF552_02145 IPR001854 Ribosomal protein L29/L35 PF552_02150 IPR019979 Ribosomal protein S17, conserved site PF552_02150 IPR012340 Nucleic acid-binding, OB-fold PF552_02150 IPR000266 Ribosomal protein S17/S11 PF552_02150 IPR019984 30S ribosomal protein S17 PF552_02155 IPR000218 Ribosomal protein L14P PF552_02155 IPR005745 Ribosomal protein L14P, bacterial-type PF552_02155 IPR019972 Ribosomal protein L14P, conserved site PF552_02155 IPR036853 Ribosomal protein L14 superfamily PF552_02160 IPR041988 Ribosomal Protein L26/L24, KOW domain PF552_02160 IPR005824 KOW PF552_02160 IPR003256 Ribosomal protein L24 PF552_02160 IPR005825 Ribosomal protein L24/L26, conserved site PF552_02160 IPR014722 Ribosomal protein L2, domain 2 PF552_02160 IPR008991 Translation protein SH3-like domain superfamily PF552_02165 IPR002132 Ribosomal protein L5 PF552_02165 IPR020930 Ribosomal protein L5, bacterial-type PF552_02165 IPR031309 Ribosomal protein L5, C-terminal PF552_02165 IPR020929 Ribosomal protein L5, conserved site PF552_02165 IPR022803 Ribosomal protein L5 domain superfamily PF552_02165 IPR031310 Ribosomal protein L5, N-terminal PF552_02170 IPR023036 Ribosomal protein S14, bacterial/plastid PF552_02170 IPR018271 Ribosomal protein S14, conserved site PF552_02170 IPR001209 Ribosomal protein S14 PF552_02175 IPR000630 Ribosomal protein S8 PF552_02175 IPR035987 Ribosomal protein S8 superfamily PF552_02180 IPR000702 Ribosomal protein L6 PF552_02180 IPR020040 Ribosomal protein L6, alpha-beta domain PF552_02180 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily PF552_02180 IPR019906 Ribosomal protein L6, bacterial-type PF552_02180 IPR002358 Ribosomal protein L6, conserved site PF552_02185 IPR005484 Ribosomal protein L18 PF552_02185 IPR004389 Ribosomal protein L18, bacterial-type PF552_02190 IPR005324 Ribosomal protein S5, C-terminal PF552_02190 IPR000851 Ribosomal protein S5 PF552_02190 IPR005712 Ribosomal protein S5, bacterial-type PF552_02190 IPR018192 Ribosomal protein S5, N-terminal, conserved site PF552_02190 IPR013810 Ribosomal protein S5, N-terminal PF552_02190 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PF552_02190 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_02195 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PF552_02195 IPR005996 Ribosomal protein L30, bacterial-type PF552_02195 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily PF552_02200 IPR021131 Ribosomal protein L18e/L15P PF552_02200 IPR001196 Ribosomal protein L15, conserved site PF552_02200 IPR036227 Ribosomal L18e/L15P superfamily PF552_02200 IPR005749 Ribosomal protein L15, bacterial-type PF552_02200 IPR030878 Ribosomal protein L15 PF552_02205 IPR026593 Protein translocase subunit SecY PF552_02205 IPR002208 SecY/SEC61-alpha family PF552_02205 IPR030659 SecY conserved site PF552_02205 IPR023201 SecY domain superfamily PF552_02210 IPR000473 Ribosomal protein L36 PF552_02210 IPR035977 Ribosomal protein L36 superfamily PF552_02215 IPR001892 Ribosomal protein S13 PF552_02215 IPR019980 Ribosomal protein S13, bacterial-type PF552_02215 IPR010979 Ribosomal protein S13-like, H2TH PF552_02215 IPR027437 30s ribosomal protein S13, C-terminal PF552_02215 IPR018269 Ribosomal protein S13, conserved site PF552_02220 IPR036967 Ribosomal protein S11 superfamily PF552_02220 IPR018102 Ribosomal S11, conserved site PF552_02220 IPR019981 Ribosomal protein S11, bacterial-type PF552_02220 IPR001971 Ribosomal protein S11 PF552_02225 IPR001912 Ribosomal protein S4/S9, N-terminal PF552_02225 IPR036986 RNA-binding S4 domain superfamily PF552_02225 IPR002942 RNA-binding S4 domain PF552_02225 IPR018079 Ribosomal protein S4, conserved site PF552_02225 IPR005709 Ribosomal protein S4, bacterial-type PF552_02225 IPR022801 Ribosomal protein S4/S9 PF552_02230 IPR011260 RNA polymerase, alpha subunit, C-terminal PF552_02230 IPR036603 RNA polymerase, RBP11-like subunit PF552_02230 IPR036643 DNA-directed RNA polymerase, insert domain superfamily PF552_02230 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type PF552_02230 IPR011262 DNA-directed RNA polymerase, insert domain PF552_02230 IPR011773 DNA-directed RNA polymerase, alpha subunit PF552_02235 IPR000456 Ribosomal protein L17 PF552_02235 IPR036373 Ribosomal protein L17 superfamily PF552_02240 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_02240 IPR020946 Flavin monooxygenase-like PF552_02245 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_02245 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_02245 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_02245 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_02245 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_02245 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_02245 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_02250 IPR005631 Flavinator of succinate dehydrogenase PF552_02250 IPR036714 Flavinator of succinate dehydrogenase superfamily PF552_02280 IPR012658 Conserved hypothetical protein CHP02443 PF552_02285 IPR001567 Peptidase M3A/M3B catalytic domain PF552_02285 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PF552_02290 IPR003029 S1 domain PF552_02290 IPR022967 RNA-binding domain, S1 PF552_02290 IPR013668 Ribonuclease R winged-helix domain PF552_02290 IPR011805 Ribonuclease R PF552_02290 IPR013223 Ribonuclease B, N-terminal OB domain PF552_02290 IPR022966 Ribonuclease II/R, conserved site PF552_02290 IPR011129 Cold shock domain PF552_02290 IPR040476 RNase II/RNase R, cold shock domain PF552_02290 IPR004476 Ribonuclease II/ribonuclease R PF552_02290 IPR012340 Nucleic acid-binding, OB-fold PF552_02290 IPR001900 Ribonuclease II/R PF552_02335 IPR011234 Fumarylacetoacetase-like, C-terminal PF552_02335 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily PF552_02340 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily PF552_02340 IPR011051 RmlC-like cupin domain superfamily PF552_02340 IPR020449 Transcription regulator HTH, AraC- type PF552_02340 IPR018062 HTH domain AraC-type, conserved site PF552_02340 IPR018060 DNA binding HTH domain, AraC-type PF552_02340 IPR009057 Homeobox-like domain superfamily PF552_02340 IPR014710 RmlC-like jelly roll fold PF552_02345 IPR000620 EamA domain PF552_02350 IPR017039 Virulence factor BrkB PF552_02350 IPR023679 Uncharacterised protein family UPF0761, bacterial PF552_02355 IPR008254 Flavodoxin/nitric oxide synthase PF552_02355 IPR001226 Flavodoxin, conserved site PF552_02355 IPR029039 Flavoprotein-like superfamily PF552_02355 IPR010089 Flavoprotein WrbA-like PF552_02355 IPR005025 NADPH-dependent FMN reductase-like PF552_02360 IPR000836 Phosphoribosyltransferase domain PF552_02360 IPR029057 Phosphoribosyltransferase-like PF552_02360 IPR010079 Xanthine phosphoribosyltransferase PF552_02380 IPR023091 Metalloprotease catalytic domain superfamily, predicted PF552_02380 IPR002036 Endoribonuclease YbeY PF552_02380 IPR020549 Endoribonuclease YbeY, conserved site PF552_02385 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_02385 IPR003714 PhoH-like protein PF552_02390 IPR005839 Methylthiotransferase PF552_02390 IPR020612 Methylthiotransferase, conserved site PF552_02390 IPR013848 Methylthiotransferase, N-terminal PF552_02390 IPR038135 Methylthiotransferase, N-terminal domain superfamily PF552_02390 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB PF552_02390 IPR007197 Radical SAM PF552_02390 IPR023404 Radical SAM, alpha/beta horseshoe PF552_02390 IPR002792 TRAM domain PF552_02390 IPR006638 Elp3/MiaB/NifB PF552_02395 IPR008258 Transglycosylase SLT domain 1 PF552_02395 IPR000189 Prokaryotic transglycosylase, active site PF552_02395 IPR023346 Lysozyme-like domain superfamily PF552_02395 IPR011055 Duplicated hybrid motif PF552_02395 IPR016047 Peptidase M23 PF552_02395 IPR010090 Phage tail tape measure protein PF552_02405 IPR001557 L-lactate/malate dehydrogenase PF552_02405 IPR022383 Lactate/malate dehydrogenase, C-terminal PF552_02405 IPR001236 Lactate/malate dehydrogenase, N-terminal PF552_02405 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal PF552_02405 IPR010945 Malate dehydrogenase, type 2 PF552_02405 IPR036291 NAD(P)-binding domain superfamily PF552_02425 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PF552_02425 IPR007473 Ribosomal RNA large subunit methyltransferase J PF552_02425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_02430 IPR000462 CDP-alcohol phosphatidyltransferase PF552_02430 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase PF552_02475 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_02475 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_02475 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_02475 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_02475 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_02475 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_02475 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_02480 IPR009057 Homeobox-like domain superfamily PF552_02480 IPR001647 DNA-binding HTH domain, TetR-type PF552_02480 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal PF552_02480 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PF552_02490 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_02490 IPR036291 NAD(P)-binding domain superfamily PF552_02495 IPR034733 Acetyl-CoA carboxylase PF552_02495 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal PF552_02495 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal PF552_02495 IPR029045 ClpP/crotonase-like domain superfamily PF552_02500 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_02500 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_02500 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_02500 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_02500 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_02500 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_02500 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_02510 IPR011053 Single hybrid motif PF552_02510 IPR011054 Rudiment single hybrid motif PF552_02510 IPR016185 Pre-ATP-grasp domain superfamily PF552_02510 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PF552_02510 IPR000089 Biotin/lipoyl attachment PF552_02510 IPR005482 Biotin carboxylase, C-terminal PF552_02510 IPR011764 Biotin carboxylation domain PF552_02510 IPR001882 Biotin-binding site PF552_02510 IPR005481 Biotin carboxylase-like, N-terminal domain PF552_02510 IPR011761 ATP-grasp fold PF552_02520 IPR007481 Stringent starvation protein B PF552_02520 IPR036760 SspB-like superfamily PF552_02525 IPR036249 Thioredoxin-like superfamily PF552_02525 IPR034341 Stringent starvation protein A, N-terminal PF552_02525 IPR004046 Glutathione S-transferase, C-terminal PF552_02525 IPR010987 Glutathione S-transferase, C-terminal-like PF552_02525 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PF552_02525 IPR004045 Glutathione S-transferase, N-terminal PF552_02525 IPR040079 Glutathione Transferase family PF552_02530 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_02530 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PF552_02530 IPR000754 Ribosomal protein S9 PF552_02530 IPR023035 Ribosomal protein S9, bacterial/plastid PF552_02530 IPR020574 Ribosomal protein S9, conserved site PF552_02535 IPR036899 Ribosomal protein L13 superfamily PF552_02535 IPR005822 Ribosomal protein L13 PF552_02535 IPR005823 Ribosomal protein L13, bacterial-type PF552_02540 IPR005255 PdxA family PF552_02540 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase PF552_02545 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PF552_02545 IPR023165 rRNA adenine dimethylase-like PF552_02545 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site PF552_02545 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal PF552_02545 IPR011530 Ribosomal RNA adenine dimethylase PF552_02545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_02550 IPR029052 Metallo-dependent phosphatase-like PF552_02550 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PF552_02550 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) PF552_02570 IPR035647 EF-G domain III/V-like PF552_02570 IPR030394 HflX-type guanine nucleotide-binding (G) domain PF552_02570 IPR032305 GTP-binding protein, middle domain PF552_02570 IPR006073 GTP binding domain PF552_02570 IPR016496 GTPase HflX PF552_02570 IPR025121 GTPase HflX, N-terminal PF552_02570 IPR042108 GTPase HflX, N-terminal domain superfamily PF552_02570 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_02580 IPR001736 Phospholipase D/Transphosphatidylase PF552_02580 IPR025202 Phospholipase D-like domain PF552_02580 IPR030871 Cardiolipin synthase C PF552_02585 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PF552_02585 IPR029052 Metallo-dependent phosphatase-like PF552_02585 IPR006311 Twin-arginine translocation pathway, signal sequence PF552_02585 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PF552_02590 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PF552_02590 IPR006664 Outer membrane protein, bacterial PF552_02590 IPR002368 Outer membrane protein, OmpA PF552_02590 IPR006665 OmpA-like domain PF552_02590 IPR036737 OmpA-like domain superfamily PF552_02590 IPR000498 Outer membrane protein OmpA-like, transmembrane domain PF552_02590 IPR006690 Outer membrane protein, OmpA-like, conserved site PF552_02595 IPR029787 Nucleotide cyclase PF552_02595 IPR000160 GGDEF domain PF552_02595 IPR003660 HAMP domain PF552_02595 IPR033417 Periplasmic sensor domain CHASE8 PF552_02630 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_02630 IPR023753 FAD/NAD(P)-binding domain PF552_02630 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PF552_02630 IPR006258 Dihydrolipoamide dehydrogenase PF552_02630 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I PF552_02630 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF552_02630 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site PF552_02640 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_02640 IPR001279 Metallo-beta-lactamase PF552_02640 IPR005939 Beta-lactamase hydrolase-like PF552_02640 IPR029021 Protein-tyrosine phosphatase-like PF552_02645 IPR029058 Alpha/Beta hydrolase fold PF552_02645 IPR000073 Alpha/beta hydrolase fold-1 PF552_02650 IPR005746 Thioredoxin PF552_02650 IPR036249 Thioredoxin-like superfamily PF552_02650 IPR017937 Thioredoxin, conserved site PF552_02650 IPR013766 Thioredoxin domain PF552_02655 IPR006683 Thioesterase domain PF552_02655 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase PF552_02655 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain PF552_02655 IPR029069 HotDog domain superfamily PF552_02665 IPR007551 Protein of unknown function DUF520 PF552_02665 IPR035571 UPF0234-like, C-terminal PF552_02665 IPR035570 UPF0234, N-terminal PF552_02665 IPR036183 YajQ-like superfamily PF552_02675 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal PF552_02675 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC PF552_02675 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_02675 IPR006076 FAD dependent oxidoreductase PF552_02675 IPR008471 MnmC-like methyltransferase PF552_02685 IPR011008 Dimeric alpha-beta barrel PF552_02685 IPR005545 YCII-related PF552_02690 IPR006008 Intracellular septation protein A PF552_02695 IPR004013 PHP domain PF552_02695 IPR016195 Polymerase/histidinol phosphatase-like PF552_02695 IPR003141 Polymerase/histidinol phosphatase, N-terminal PF552_02700 IPR021134 Bestrophin/UPF0187 PF552_02705 IPR025657 RadC-like JAB domain PF552_02705 IPR010994 RuvA domain 2-like PF552_02705 IPR001405 Uncharacterised protein family UPF0758 PF552_02705 IPR037518 MPN domain PF552_02710 IPR035929 CoaB-like superfamily PF552_02710 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC PF552_02710 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal PF552_02710 IPR036551 Flavin prenyltransferase-like PF552_02710 IPR003382 Flavoprotein PF552_02715 IPR005665 Protein-export membrane protein SecF, bacterial PF552_02715 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PF552_02715 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PF552_02715 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PF552_02720 IPR005791 Protein translocase subunit SecD PF552_02720 IPR027398 SecD export protein N-terminal TM domain PF552_02720 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PF552_02720 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PF552_02720 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PF552_02725 IPR003849 Preprotein translocase YajC PF552_02730 IPR002616 tRNA-guanine(15) transglycosylase-like PF552_02730 IPR004803 tRNA-guanine transglycosylase PF552_02730 IPR036511 Queuine tRNA-ribosyltransferase-like PF552_02745 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA PF552_02745 IPR042118 QueA, domain 1 PF552_02745 IPR042119 QueA, domain 2 PF552_02745 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily PF552_02755 IPR003594 Histidine kinase/HSP90-like ATPase PF552_02755 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_02755 IPR005467 Histidine kinase domain PF552_02755 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_02755 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_02755 IPR011649 KaiB domain PF552_02755 IPR023527 Adaptive-response sensory-kinase SasA PF552_02755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_02755 IPR036249 Thioredoxin-like superfamily PF552_02760 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme PF552_02760 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase PF552_02760 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain PF552_02765 IPR018300 Aminotransferase, class IV, conserved site PF552_02765 IPR005785 Branched-chain amino acid aminotransferase I PF552_02765 IPR033939 Branched-chain aminotransferase PF552_02765 IPR001544 Aminotransferase class IV PF552_02765 IPR036038 Aminotransferase-like, PLP-dependent enzymes PF552_02780 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel PF552_02780 IPR002509 NodB homology domain PF552_02785 IPR001173 Glycosyltransferase 2-like PF552_02785 IPR029044 Nucleotide-diphospho-sugar transferases PF552_02790 IPR001296 Glycosyl transferase, family 1 PF552_02790 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PF552_02830 IPR029351 GAD domain PF552_02830 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PF552_02830 IPR006195 Aminoacyl-tRNA synthetase, class II PF552_02830 IPR004524 Aspartate-tRNA ligase, type 1 PF552_02830 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb PF552_02830 IPR004115 GAD-like domain superfamily PF552_02830 IPR012340 Nucleic acid-binding, OB-fold PF552_02830 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PF552_02840 IPR012910 TonB-dependent receptor, plug domain PF552_02840 IPR039426 Vitamin B12 transporter BtuB-like PF552_02840 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_02840 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_02860 IPR009315 Phosphate-starvation-induced PsiE PF552_02860 IPR020948 Phosphate-starvation-induced PsiE-like PF552_02865 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PF552_02865 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_02865 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_02865 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_02865 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_02865 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_02865 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_02870 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PF552_02870 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_02870 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_02870 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_02870 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_02870 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_02870 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_02880 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_02880 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_02880 IPR005467 Histidine kinase domain PF552_02880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_02880 IPR003594 Histidine kinase/HSP90-like ATPase PF552_02880 IPR003660 HAMP domain PF552_02880 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_02885 IPR001867 OmpR/PhoB-type DNA-binding domain PF552_02885 IPR011006 CheY-like superfamily PF552_02885 IPR016032 Signal transduction response regulator, C-terminal effector PF552_02885 IPR001789 Signal transduction response regulator, receiver domain PF552_02885 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_02885 IPR039420 Transcriptional regulatory protein WalR-like PF552_02890 IPR003846 Protein adenylyltransferase SelO PF552_02905 IPR030395 Glycerophosphodiester phosphodiesterase domain PF552_02905 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily PF552_02910 IPR016030 Cobalamin adenosyltransferase-like PF552_02910 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type PF552_02910 IPR036451 Cobalamin adenosyltransferase-like superfamily PF552_02915 IPR010101 TonB-dependent vitamin B12 transporter BtuB PF552_02915 IPR039426 Vitamin B12 transporter BtuB-like PF552_02915 IPR012910 TonB-dependent receptor, plug domain PF552_02915 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_02915 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_02915 IPR010917 TonB-dependent receptor, conserved site PF552_02915 IPR010916 TonB box, conserved site PF552_02915 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_02920 IPR013785 Aldolase-type TIM barrel PF552_02920 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) PF552_02920 IPR011060 Ribulose-phosphate binding barrel PF552_02925 IPR006654 Tryptophan synthase, beta chain PF552_02925 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PF552_02925 IPR023026 Tryptophan synthase beta chain/beta chain-like PF552_02925 IPR006653 Tryptophan synthase, beta chain, conserved site PF552_02925 IPR001926 Pyridoxal-phosphate dependent enzyme PF552_02950 IPR002028 Tryptophan synthase, alpha chain PF552_02950 IPR018204 Tryptophan synthase, alpha chain, active site PF552_02950 IPR011060 Ribulose-phosphate binding barrel PF552_02950 IPR013785 Aldolase-type TIM barrel PF552_02955 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit PF552_02955 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal PF552_02955 IPR029045 ClpP/crotonase-like domain superfamily PF552_02955 IPR034733 Acetyl-CoA carboxylase PF552_02960 IPR004101 Mur ligase, C-terminal PF552_02960 IPR001645 Folylpolyglutamate synthetase PF552_02960 IPR018109 Folylpolyglutamate synthetase, conserved site PF552_02960 IPR036565 Mur-like, catalytic domain superfamily PF552_02960 IPR036615 Mur ligase, C-terminal domain superfamily PF552_02960 IPR013221 Mur ligase, central PF552_02975 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_02975 IPR001279 Metallo-beta-lactamase PF552_02980 IPR013766 Thioredoxin domain PF552_02980 IPR036249 Thioredoxin-like superfamily PF552_02980 IPR022915 Peroxiredoxin, TDXH subfamily PF552_02980 IPR019479 Peroxiredoxin, C-terminal PF552_02980 IPR024706 Peroxiredoxin, AhpC-type PF552_02980 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PF552_02985 IPR000185 Protein translocase subunit SecA PF552_02985 IPR004027 SEC-C motif PF552_02985 IPR036670 SecA, preprotein cross-linking domain superfamily PF552_02985 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_02985 IPR011115 SecA DEAD-like, N-terminal PF552_02985 IPR014018 SecA motor DEAD PF552_02985 IPR011130 SecA, preprotein cross-linking domain PF552_02985 IPR011116 SecA Wing/Scaffold PF552_02985 IPR036266 SecA, Wing/Scaffold superfamily PF552_02985 IPR020937 SecA conserved site PF552_02995 IPR005829 Sugar transporter, conserved site PF552_02995 IPR004736 MFS transporter, metabolite:H symporter PF552_02995 IPR036259 MFS transporter superfamily PF552_02995 IPR005828 Major facilitator, sugar transporter-like PF552_02995 IPR020846 Major facilitator superfamily domain PF552_02995 IPR011701 Major facilitator superfamily PF552_03000 IPR005744 Hly-III PF552_03000 IPR004254 AdipoR/Haemolysin-III-related PF552_03035 IPR036291 NAD(P)-binding domain superfamily PF552_03035 IPR012802 Fatty oxidation complex, alpha subunit FadJ PF552_03035 IPR001753 Enoyl-CoA hydratase/isomerase PF552_03035 IPR029045 ClpP/crotonase-like domain superfamily PF552_03035 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_03035 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PF552_03035 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PF552_03035 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site PF552_03040 IPR020613 Thiolase, conserved site PF552_03040 IPR020617 Thiolase, C-terminal PF552_03040 IPR020610 Thiolase, active site PF552_03040 IPR020615 Thiolase, acyl-enzyme intermediate active site PF552_03040 IPR002155 Thiolase PF552_03040 IPR020616 Thiolase, N-terminal PF552_03040 IPR016039 Thiolase-like PF552_03045 IPR003313 AraC-type arabinose-binding/dimerisation domain PF552_03045 IPR009057 Homeobox-like domain superfamily PF552_03045 IPR037923 Transcription regulator HTH-like PF552_03045 IPR018060 DNA binding HTH domain, AraC-type PF552_03045 IPR018062 HTH domain AraC-type, conserved site PF552_03045 IPR020449 Transcription regulator HTH, AraC- type PF552_03050 IPR003673 CoA-transferase family III PF552_03050 IPR023606 CoA-transferase family III domain superfamily PF552_03055 IPR007049 Carbohydrate-selective porin OprB PF552_03055 IPR038673 Carbohydrate-selective porin OprB superfamily PF552_03060 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PF552_03060 IPR017511 PQQ-dependent membrane bound dehydrogenase PF552_03060 IPR002372 Pyrrolo-quinoline quinone repeat PF552_03060 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PF552_03060 IPR001479 Quinoprotein dehydrogenase, conserved site PF552_03065 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily PF552_03065 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain PF552_03065 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain PF552_03065 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site PF552_03075 IPR000390 Small multidrug resistance protein family PF552_03085 IPR002155 Thiolase PF552_03085 IPR016039 Thiolase-like PF552_03085 IPR020615 Thiolase, acyl-enzyme intermediate active site PF552_03085 IPR020617 Thiolase, C-terminal PF552_03085 IPR020613 Thiolase, conserved site PF552_03085 IPR020616 Thiolase, N-terminal PF552_03085 IPR020610 Thiolase, active site PF552_03095 IPR036737 OmpA-like domain superfamily PF552_03095 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PF552_03095 IPR006664 Outer membrane protein, bacterial PF552_03095 IPR006665 OmpA-like domain PF552_03095 IPR027385 Outer membrane protein beta-barrel domain PF552_03105 IPR036025 tRNA-splicing ligase RtcB-like superfamily PF552_03105 IPR001233 tRNA-splicing ligase, RtcB PF552_03110 IPR004840 Amino acid permease, conserved site PF552_03110 IPR004841 Amino acid permease/ SLC12A domain PF552_03115 IPR007848 Methyltransferase small domain PF552_03115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_03115 IPR023543 rRNA small subunit methyltransferase C PF552_03115 IPR013675 Methyltransferase small, N-terminal PF552_03115 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PF552_03120 IPR006042 Xanthine/uracil permease PF552_03120 IPR006043 Xanthine/uracil/vitamin C permease PF552_03125 IPR042116 GTP-binding protein TypA/BipA, C-terminal PF552_03125 IPR000795 Transcription factor, GTP-binding domain PF552_03125 IPR005225 Small GTP-binding protein domain PF552_03125 IPR006298 GTP-binding protein TypA PF552_03125 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_03125 IPR035647 EF-G domain III/V-like PF552_03125 IPR000640 Elongation factor EFG, domain V-like PF552_03125 IPR009000 Translation protein, beta-barrel domain superfamily PF552_03125 IPR035651 BipA, domain V PF552_03125 IPR031157 Tr-type G domain, conserved site PF552_03125 IPR004161 Translation elongation factor EFTu-like, domain 2 PF552_03130 IPR019823 Large-conductance mechanosensitive channel, conserved site PF552_03130 IPR001185 Large-conductance mechanosensitive channel PF552_03130 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L PF552_03130 IPR036019 Gated mechanosensitive channel PF552_03140 IPR023059 Foldase protein PrsA PF552_03140 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type PF552_03140 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PF552_03140 IPR027304 Trigger factor/SurA domain superfamily PF552_03145 IPR010663 Zinc finger, FPG/IleRS-type PF552_03145 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type PF552_03145 IPR010979 Ribosomal protein S13-like, H2TH PF552_03145 IPR035937 MutM-like, N-terminal PF552_03145 IPR020629 Formamidopyrimidine-DNA glycosylase PF552_03145 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding PF552_03145 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain PF552_03150 IPR011034 Formyl transferase-like, C-terminal domain superfamily PF552_03150 IPR003180 Methylpurine-DNA glycosylase PF552_03150 IPR036995 Methylpurine-DNA glycosylase superfamily PF552_03155 IPR039426 Vitamin B12 transporter BtuB-like PF552_03155 IPR012910 TonB-dependent receptor, plug domain PF552_03155 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_03155 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_03155 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_03155 IPR010105 TonB-dependent siderophore receptor PF552_03160 IPR013785 Aldolase-type TIM barrel PF552_03160 IPR023663 NADPH dehydrogenase PF552_03160 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PF552_03175 IPR017937 Thioredoxin, conserved site PF552_03175 IPR036249 Thioredoxin-like superfamily PF552_03175 IPR033954 Disulphide bond isomerase, DsbC/G PF552_03175 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PF552_03175 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily PF552_03175 IPR012336 Thioredoxin-like fold PF552_03180 IPR017703 YgfZ/GcvT conserved site PF552_03180 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PF552_03180 IPR006222 Aminomethyltransferase, folate-binding domain PF552_03180 IPR028896 Aminomethyltransferase-like PF552_03190 IPR007438 Protein of unknown function DUF488 PF552_03195 IPR004624 PhnA protein PF552_03195 IPR013987 PhnA protein, N-terminal PF552_03195 IPR013988 PhnA protein, C-terminal PF552_03200 IPR010879 Domain of unknown function DUF1508 PF552_03200 IPR036913 YegP-like superfamily PF552_03205 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) PF552_03205 IPR004154 Anticodon-binding PF552_03205 IPR036621 Anticodon-binding domain superfamily PF552_03205 IPR006195 Aminoacyl-tRNA synthetase, class II PF552_03205 IPR002316 Proline-tRNA ligase, class IIa PF552_03205 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain PF552_03205 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily PF552_03205 IPR033730 Prokaryote proline-tRNA ligase core domain PF552_03205 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 PF552_03205 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type PF552_03210 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PF552_03210 IPR001036 Acriflavin resistance protein PF552_03225 IPR011006 CheY-like superfamily PF552_03225 IPR001789 Signal transduction response regulator, receiver domain PF552_03230 IPR011006 CheY-like superfamily PF552_03230 IPR001789 Signal transduction response regulator, receiver domain PF552_03235 IPR039315 Chemotaxis protein CheW PF552_03235 IPR002545 CheW-like domain PF552_03235 IPR036061 CheW-like domain superfamily PF552_03240 IPR004090 Chemotaxis methyl-accepting receptor PF552_03240 IPR003660 HAMP domain PF552_03240 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PF552_03240 IPR029095 NarX-like, N-terminal PF552_03245 IPR005467 Histidine kinase domain PF552_03245 IPR036061 CheW-like domain superfamily PF552_03245 IPR002545 CheW-like domain PF552_03245 IPR036641 HPT domain superfamily PF552_03245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_03245 IPR001789 Signal transduction response regulator, receiver domain PF552_03245 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PF552_03245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_03245 IPR011006 CheY-like superfamily PF552_03245 IPR003594 Histidine kinase/HSP90-like ATPase PF552_03260 IPR011650 Peptidase M20, dimerisation domain PF552_03260 IPR002933 Peptidase M20 PF552_03260 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria PF552_03260 IPR036264 Bacterial exopeptidase dimerisation domain PF552_03265 IPR012556 Entericidin A/B PF552_03275 IPR007401 Protein of unknown function DUF454 PF552_03280 IPR038063 L,D-transpeptidase catalytic domain-like PF552_03280 IPR041597 L,D-transpeptidase C-terminal domain PF552_03280 IPR005490 L,D-transpeptidase catalytic domain PF552_03320 IPR008254 Flavodoxin/nitric oxide synthase PF552_03320 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain PF552_03320 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding PF552_03320 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria PF552_03320 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_03320 IPR001094 Flavodoxin-like PF552_03320 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PF552_03320 IPR029039 Flavoprotein-like superfamily PF552_03320 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_03320 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily PF552_03320 IPR017938 Riboflavin synthase-like beta-barrel PF552_03320 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_03330 IPR010019 Integral membrane protein, YccS PF552_03330 IPR032692 Integral membrane protein YccS, N-terminal PF552_03330 IPR010020 Integral membrane protein, YccS/YhfK PF552_03335 IPR004812 Drug resistance transporter Bcr/CmlA subfamily PF552_03335 IPR011701 Major facilitator superfamily PF552_03335 IPR020846 Major facilitator superfamily domain PF552_03335 IPR036259 MFS transporter superfamily PF552_03335 IPR004734 Multidrug resistance protein PF552_03340 IPR029479 Nitroreductase PF552_03340 IPR000415 Nitroreductase-like PF552_03355 IPR001463 Sodium:alanine symporter PF552_03360 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PF552_03360 IPR001423 Lysophospholipase patatin, conserved site PF552_03360 IPR002641 Patatin-like phospholipase domain PF552_03365 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PF552_03365 IPR002912 ACT domain PF552_03365 IPR001926 Pyridoxal-phosphate dependent enzyme PF552_03365 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PF552_03365 IPR005789 Threonine dehydratase, catabolic PF552_03370 IPR036640 ABC transporter type 1, transmembrane domain superfamily PF552_03370 IPR009248 SbmA/BacA-like PF552_03395 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like PF552_03395 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit PF552_03395 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E PF552_03395 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic PF552_03395 IPR018027 Asn/Gln amidotransferase PF552_03395 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 PF552_03395 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 PF552_03395 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PF552_03395 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site PF552_03400 IPR020556 Amidase, conserved site PF552_03400 IPR023631 Amidase signature domain PF552_03400 IPR036928 Amidase signature (AS) superfamily PF552_03400 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit PF552_03400 IPR000120 Amidase PF552_03405 IPR003837 Glu-tRNAGln amidotransferase C subunit PF552_03405 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C PF552_03410 IPR004753 Cell shape determining protein MreB PF552_03415 IPR007221 Rod shape-determining protein MreC PF552_03415 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 PF552_03415 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 PF552_03420 IPR026034 Cell shape-determining protein MreD, proteobacterial type PF552_03420 IPR007227 Cell shape-determining protein MreD PF552_03425 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein PF552_03425 IPR029001 Inosine triphosphate pyrophosphatase-like PF552_03430 IPR003029 S1 domain PF552_03430 IPR004659 Ribonuclease E/G PF552_03430 IPR022967 RNA-binding domain, S1 PF552_03430 IPR012340 Nucleic acid-binding, OB-fold PF552_03430 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G PF552_03440 IPR014292 Acyltransferase, WS/DGAT/MGAT PF552_03440 IPR009721 O-acyltransferase WSD1, C-terminal PF552_03440 IPR004255 O-acyltransferase, WSD1, N-terminal PF552_03445 IPR011798 Adenosine 5'-phosphosulphate reductase PF552_03445 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase PF552_03445 IPR002500 Phosphoadenosine phosphosulphate reductase PF552_03445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_03450 IPR036412 HAD-like superfamily PF552_03450 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein PF552_03450 IPR023214 HAD superfamily PF552_03460 IPR029039 Flavoprotein-like superfamily PF552_03460 IPR003680 Flavodoxin-like fold PF552_03480 IPR003824 Undecaprenyl-diphosphatase UppP PF552_03485 IPR009057 Homeobox-like domain superfamily PF552_03485 IPR018060 DNA binding HTH domain, AraC-type PF552_03485 IPR009594 Transcription regulator HTH, AraC, N-terminal PF552_03490 IPR036291 NAD(P)-binding domain superfamily PF552_03490 IPR004627 L-threonine 3-dehydrogenase PF552_03490 IPR020843 Polyketide synthase, enoylreductase domain PF552_03490 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PF552_03490 IPR013154 Alcohol dehydrogenase, N-terminal PF552_03490 IPR013149 Alcohol dehydrogenase, C-terminal PF552_03490 IPR011032 GroES-like superfamily PF552_03495 IPR029062 Class I glutamine amidotransferase-like PF552_03495 IPR002818 DJ-1/PfpI PF552_03495 IPR017283 Protein/nucleic acid deglycase HchA PF552_03530 IPR004840 Amino acid permease, conserved site PF552_03530 IPR004841 Amino acid permease/ SLC12A domain PF552_03535 IPR007400 PrpF protein PF552_03535 IPR012709 2-methyl-aconitate isomerase PrpF PF552_03540 IPR008949 Isoprenoid synthase domain superfamily PF552_03540 IPR000092 Polyprenyl synthetase PF552_03540 IPR033749 Polyprenyl synthetase, conserved site PF552_03545 IPR007351 Uncharacterised protein YjbR PF552_03545 IPR038056 YjbR-like superfamily PF552_03550 IPR001107 Band 7 domain PF552_03550 IPR036013 Band 7/SPFH domain superfamily PF552_03550 IPR018080 Band 7/stomatin-like, conserved site PF552_03550 IPR001972 Stomatin family PF552_03560 IPR002641 Patatin-like phospholipase domain PF552_03560 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PF552_03560 IPR001423 Lysophospholipase patatin, conserved site PF552_03580 IPR017850 Alkaline-phosphatase-like, core domain superfamily PF552_03580 IPR012549 Phosphoethanolamine transferase, N-terminal PF552_03580 IPR040423 Phosphoethanolamine transferase PF552_03580 IPR000917 Sulfatase, N-terminal PF552_03585 IPR011006 CheY-like superfamily PF552_03585 IPR001867 OmpR/PhoB-type DNA-binding domain PF552_03585 IPR001789 Signal transduction response regulator, receiver domain PF552_03585 IPR039420 Transcriptional regulatory protein WalR-like PF552_03585 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_03590 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_03590 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_03590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_03590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_03590 IPR003660 HAMP domain PF552_03590 IPR013727 Two-component sensor kinase, N-terminal PF552_03590 IPR003594 Histidine kinase/HSP90-like ATPase PF552_03590 IPR005467 Histidine kinase domain PF552_03605 IPR001905 Ammonium transporter PF552_03605 IPR018047 Ammonium transporter, conserved site PF552_03605 IPR024041 Ammonium transporter AmtB-like domain PF552_03605 IPR029020 Ammonium/urea transporter PF552_03610 IPR005119 LysR, substrate-binding PF552_03610 IPR000847 Transcription regulator HTH, LysR PF552_03610 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_03610 IPR036390 Winged helix DNA-binding domain superfamily PF552_03630 IPR002300 Aminoacyl-tRNA synthetase, class Ia PF552_03630 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PF552_03630 IPR033705 Valyl tRNA synthetase, anticodon-binding domain PF552_03630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_03630 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm PF552_03630 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PF552_03630 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily PF552_03630 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm PF552_03630 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PF552_03630 IPR002303 Valine-tRNA ligase PF552_03630 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PF552_03640 IPR036291 NAD(P)-binding domain superfamily PF552_03640 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_03640 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_03640 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PF552_03650 IPR002765 Uncharacterised protein family UPF0145 PF552_03650 IPR035439 UPF0145 domain superfamily PF552_03655 IPR002765 Uncharacterised protein family UPF0145 PF552_03655 IPR035439 UPF0145 domain superfamily PF552_03660 IPR003423 Outer membrane efflux protein PF552_03660 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PF552_03665 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PF552_03665 IPR001036 Acriflavin resistance protein PF552_03665 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PF552_03670 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PF552_03670 IPR006143 RND efflux pump, membrane fusion protein PF552_03685 IPR008949 Isoprenoid synthase domain superfamily PF552_03685 IPR000092 Polyprenyl synthetase PF552_03685 IPR033749 Polyprenyl synthetase, conserved site PF552_03695 IPR018258 Ribosomal protein L21, conserved site PF552_03695 IPR036164 L21-like superfamily PF552_03695 IPR028909 Ribosomal protein L21-like PF552_03695 IPR001787 Ribosomal protein L21 PF552_03700 IPR001684 Ribosomal protein L27 PF552_03700 IPR018261 Ribosomal protein L27, conserved site PF552_03705 IPR029046 Lipoprotein localisation LolA/LolB/LppX PF552_03705 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PF552_03705 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria PF552_03715 IPR002317 Serine-tRNA ligase, type1 PF552_03715 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) PF552_03715 IPR006195 Aminoacyl-tRNA synthetase, class II PF552_03715 IPR015866 Serine-tRNA synthetase, type1, N-terminal PF552_03715 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily PF552_03715 IPR033729 Serine-tRNA ligase catalytic core domain PF552_03715 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm PF552_03720 IPR028281 Siroheme synthase, central domain PF552_03720 IPR019478 Sirohaem synthase, dimerisation domain PF552_03720 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PF552_03720 IPR012409 Sirohaem synthase PF552_03720 IPR006367 Sirohaem synthase, N-terminal PF552_03720 IPR036291 NAD(P)-binding domain superfamily PF552_03720 IPR037115 Sirohaem synthase, dimerisation domain superfamily PF552_03720 IPR014776 Tetrapyrrole methylase, subdomain 2 PF552_03720 IPR014777 Tetrapyrrole methylase, subdomain 1 PF552_03720 IPR035996 Tetrapyrrole methylase superfamily PF552_03720 IPR000878 Tetrapyrrole methylase PF552_03720 IPR006366 Uroporphyrin-III C-methyltransferase PF552_03725 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PF552_03725 IPR001537 tRNA/rRNA methyltransferase, SpoU type PF552_03725 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase PF552_03725 IPR029028 Alpha/beta knot methyltransferases PF552_03730 IPR002577 Helix-turn-helix, HxlR type PF552_03730 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_03730 IPR036390 Winged helix DNA-binding domain superfamily PF552_03735 IPR005025 NADPH-dependent FMN reductase-like PF552_03735 IPR008254 Flavodoxin/nitric oxide synthase PF552_03735 IPR029039 Flavoprotein-like superfamily PF552_03740 IPR002293 Amino acid/polyamine transporter I PF552_03745 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA PF552_03745 IPR018211 Alcohol dehydrogenase, iron-type, conserved site PF552_03745 IPR039697 Iron-type alcohol dehydrogenase-like PF552_03755 IPR000544 Octanoyltransferase PF552_03755 IPR020605 Octanoyltransferase, conserved site PF552_03755 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain PF552_03760 IPR007454 Uncharacterised protein family UPF0250 PF552_03760 IPR027471 YbeD-like domain superfamily PF552_03765 IPR007127 RNA polymerase sigma factor 70, region 1.1 PF552_03765 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_03765 IPR028630 RNA polymerase sigma factor RpoD PF552_03765 IPR013324 RNA polymerase sigma factor, region 3/4-like PF552_03765 IPR013325 RNA polymerase sigma factor, region 2 PF552_03765 IPR042189 Sigma-70 factor, region 1.1 superfamily PF552_03765 IPR007631 RNA polymerase sigma factor 70, non-essential domain PF552_03765 IPR012760 RNA polymerase sigma factor RpoD, C-terminal PF552_03765 IPR007624 RNA polymerase sigma-70 region 3 PF552_03765 IPR007627 RNA polymerase sigma-70 region 2 PF552_03765 IPR009042 RNA polymerase sigma-70 region 1.2 PF552_03765 IPR000943 RNA polymerase sigma-70 PF552_03765 IPR014284 RNA polymerase sigma-70 like domain PF552_03765 IPR007630 RNA polymerase sigma-70 region 4 PF552_03780 IPR001763 Rhodanese-like domain PF552_03780 IPR036873 Rhodanese-like domain superfamily PF552_03780 IPR020936 Uncharacterised protein family UPF0176 PF552_03780 IPR040503 UPF0176, acylphosphatase-like domain PF552_03790 IPR010953 Citrate synthase, type I PF552_03790 IPR024176 Citrate synthase, bacterial-type PF552_03790 IPR019810 Citrate synthase active site PF552_03790 IPR036969 Citrate synthase superfamily PF552_03790 IPR016143 Citrate synthase-like, small alpha subdomain PF552_03790 IPR016142 Citrate synthase-like, large alpha subdomain PF552_03790 IPR002020 Citrate synthase PF552_03795 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit PF552_03795 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site PF552_03795 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit PF552_03795 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit PF552_03800 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit PF552_03800 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor PF552_03800 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit PF552_03805 IPR011281 Succinate dehydrogenase, flavoprotein subunit PF552_03805 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PF552_03805 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_03805 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site PF552_03805 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily PF552_03805 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal PF552_03805 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily PF552_03805 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit PF552_03810 IPR036010 2Fe-2S ferredoxin-like superfamily PF552_03810 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PF552_03810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PF552_03810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PF552_03810 IPR012675 Beta-grasp domain superfamily PF552_03810 IPR009051 Alpha-helical ferredoxin PF552_03810 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein PF552_03810 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal PF552_03825 IPR005475 Transketolase-like, pyrimidine-binding domain PF552_03825 IPR029061 Thiamin diphosphate-binding fold PF552_03825 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily PF552_03825 IPR011603 2-oxoglutarate dehydrogenase E1 component PF552_03825 IPR001017 Dehydrogenase, E1 component PF552_03825 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain PF552_03825 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal PF552_03830 IPR011053 Single hybrid motif PF552_03830 IPR006255 Dihydrolipoamide succinyltransferase PF552_03830 IPR036625 E3-binding domain superfamily PF552_03830 IPR004167 Peripheral subunit-binding domain PF552_03830 IPR000089 Biotin/lipoyl attachment PF552_03830 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PF552_03830 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PF552_03830 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PF552_03835 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site PF552_03835 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF552_03835 IPR006258 Dihydrolipoamide dehydrogenase PF552_03835 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I PF552_03835 IPR023753 FAD/NAD(P)-binding domain PF552_03835 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_03835 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PF552_03840 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site PF552_03840 IPR016102 Succinyl-CoA synthetase-like PF552_03840 IPR011761 ATP-grasp fold PF552_03840 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type PF552_03840 IPR013815 ATP-grasp fold, subdomain 1 PF552_03840 IPR005811 ATP-citrate lyase/succinyl-CoA ligase PF552_03840 IPR005809 Succinate--CoA synthetase, beta subunit PF552_03845 IPR016102 Succinyl-CoA synthetase-like PF552_03845 IPR036291 NAD(P)-binding domain superfamily PF552_03845 IPR005811 ATP-citrate lyase/succinyl-CoA ligase PF552_03845 IPR005810 Succinyl-CoA ligase, alpha subunit PF552_03845 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site PF552_03845 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PF552_03845 IPR003781 CoA-binding PF552_03850 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PF552_03850 IPR002305 Aminoacyl-tRNA synthetase, class Ic PF552_03850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_03850 IPR002306 Tryptophan-tRNA ligase PF552_03850 IPR024109 Tryptophan-tRNA ligase, bacterial-type PF552_03855 IPR008526 Inner membrane protein YedI PF552_03860 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PF552_03865 IPR018422 Cation/H+ exchanger, CPA1 family PF552_03865 IPR038770 Sodium/solute symporter superfamily PF552_03865 IPR006153 Cation/H+ exchanger PF552_03880 IPR019079 Capsule synthesis protein, CapA PF552_03880 IPR029052 Metallo-dependent phosphatase-like PF552_03890 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain PF552_03890 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding PF552_03890 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_03895 IPR006016 UspA PF552_03895 IPR006015 Universal stress protein A family PF552_03895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_03900 IPR001451 Hexapeptide repeat PF552_03900 IPR018357 Hexapeptide transferase, conserved site PF552_03900 IPR011004 Trimeric LpxA-like superfamily PF552_03905 IPR028624 Transcription elongation factor GreA/GreB PF552_03905 IPR023459 Transcription elongation factor GreA/GreB family PF552_03905 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal PF552_03905 IPR006359 Transcription elongation factor GreA PF552_03905 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily PF552_03905 IPR018151 Transcription elongation factor, GreA/GreB, conserved site PF552_03905 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily PF552_03905 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal PF552_03910 IPR011607 Methylglyoxal synthase-like domain PF552_03910 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain PF552_03910 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain PF552_03910 IPR016185 Pre-ATP-grasp domain superfamily PF552_03910 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PF552_03910 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily PF552_03910 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain PF552_03910 IPR006275 Carbamoyl-phosphate synthase, large subunit PF552_03910 IPR011761 ATP-grasp fold PF552_03910 IPR036914 Methylglyoxal synthase-like domain superfamily PF552_03915 IPR006274 Carbamoyl-phosphate synthase, small subunit PF552_03915 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain PF552_03915 IPR029062 Class I glutamine amidotransferase-like PF552_03915 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain PF552_03915 IPR017926 Glutamine amidotransferase PF552_03915 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily PF552_03930 IPR001890 RNA-binding, CRM domain PF552_03930 IPR017924 RNA-binding protein YhbY PF552_03930 IPR035920 YhbY-like superfamily PF552_03935 IPR015507 Ribosomal RNA large subunit methyltransferase E PF552_03935 IPR002877 Ribosomal RNA methyltransferase FtsJ domain PF552_03935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_03940 IPR003959 ATPase, AAA-type, core PF552_03940 IPR003593 AAA+ ATPase domain PF552_03940 IPR003960 ATPase, AAA-type, conserved site PF552_03940 IPR037219 Peptidase M41-like PF552_03940 IPR005936 Peptidase, FtsH PF552_03940 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_03940 IPR011546 Peptidase M41, FtsH extracellular PF552_03940 IPR000642 Peptidase M41 PF552_03940 IPR041569 AAA ATPase, AAA+ lid domain PF552_03945 IPR006390 Dihydropteroate synthase PF552_03945 IPR011005 Dihydropteroate synthase-like PF552_03945 IPR000489 Pterin-binding domain PF552_03965 IPR018946 Alkaline phosphatase D-related PF552_03965 IPR008963 Purple acid phosphatase-like, N-terminal PF552_03965 IPR032093 Phospholipase D, N-terminal PF552_03965 IPR038607 PhoD-like superfamily PF552_03965 IPR006311 Twin-arginine translocation pathway, signal sequence PF552_03980 IPR036291 NAD(P)-binding domain superfamily PF552_03980 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PF552_03980 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site PF552_03980 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PF552_03980 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase PF552_03985 IPR004498 Ribosomal protein L11 methyltransferase PF552_03985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_03995 IPR020846 Major facilitator superfamily domain PF552_03995 IPR004736 MFS transporter, metabolite:H symporter PF552_03995 IPR036259 MFS transporter superfamily PF552_03995 IPR005828 Major facilitator, sugar transporter-like PF552_03995 IPR005829 Sugar transporter, conserved site PF552_04000 IPR000577 Carbohydrate kinase, FGGY PF552_04000 IPR005999 Glycerol kinase PF552_04000 IPR018483 Carbohydrate kinase, FGGY, conserved site PF552_04000 IPR018484 Carbohydrate kinase, FGGY, N-terminal PF552_04000 IPR018485 Carbohydrate kinase, FGGY, C-terminal PF552_04005 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase PF552_04005 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_04005 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily PF552_04005 IPR031656 Alpha-glycerophosphate oxidase, C-terminal PF552_04005 IPR006076 FAD dependent oxidoreductase PF552_04010 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal PF552_04010 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site PF552_04010 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal PF552_04010 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising PF552_04010 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain PF552_04010 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal PF552_04015 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PF552_04015 IPR001206 Diacylglycerol kinase, catalytic domain PF552_04015 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal PF552_04020 IPR042283 GpdQ, catalytic alpha/beta sandwich domain PF552_04020 IPR042281 GpdQ, beta-strand dimerisation domain PF552_04020 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA PF552_04020 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PF552_04030 IPR011032 GroES-like superfamily PF552_04030 IPR020818 GroES chaperonin family PF552_04030 IPR037124 GroES chaperonin superfamily PF552_04030 IPR018369 Chaperonin GroES, conserved site PF552_04035 IPR027409 GroEL-like apical domain superfamily PF552_04035 IPR002423 Chaperonin Cpn60/TCP-1 family PF552_04035 IPR001844 Chaperonin Cpn60 PF552_04035 IPR018370 Chaperonin Cpn60, conserved site PF552_04035 IPR027413 GroEL-like equatorial domain superfamily PF552_04035 IPR027410 TCP-1-like chaperonin intermediate domain superfamily PF552_04040 IPR036945 Diacylglycerol kinase (DAGK) superfamily PF552_04040 IPR033718 Diacylglycerol kinase, prokaryotic PF552_04040 IPR000829 DAGK family PF552_04045 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_04045 IPR001279 Metallo-beta-lactamase PF552_04050 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily PF552_04050 IPR030395 Glycerophosphodiester phosphodiesterase domain PF552_04055 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PF552_04055 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PF552_04055 IPR001036 Acriflavin resistance protein PF552_04065 IPR001915 Peptidase M48 PF552_04065 IPR022919 Peptidase M48, protease HtpX, putative PF552_04070 IPR000189 Prokaryotic transglycosylase, active site PF552_04070 IPR023346 Lysozyme-like domain superfamily PF552_04070 IPR008258 Transglycosylase SLT domain 1 PF552_04075 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type PF552_04075 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase PF552_04075 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PF552_04075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_04085 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PF552_04085 IPR000189 Prokaryotic transglycosylase, active site PF552_04085 IPR008258 Transglycosylase SLT domain 1 PF552_04085 IPR023346 Lysozyme-like domain superfamily PF552_04085 IPR023703 Membrane-bound lytic murein transglycosylase F PF552_04090 IPR018151 Transcription elongation factor, GreA/GreB, conserved site PF552_04090 IPR006358 Transcription elongation factor GreB PF552_04090 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily PF552_04090 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal PF552_04090 IPR023459 Transcription elongation factor GreA/GreB family PF552_04090 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily PF552_04090 IPR028624 Transcription elongation factor GreA/GreB PF552_04090 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal PF552_04105 IPR029058 Alpha/Beta hydrolase fold PF552_04105 IPR036736 ACP-like superfamily PF552_04105 IPR025110 AMP-binding enzyme, C-terminal domain PF552_04105 IPR000873 AMP-dependent synthetase/ligase PF552_04105 IPR001031 Thioesterase PF552_04105 IPR009081 Phosphopantetheine binding ACP domain PF552_04105 IPR020802 Polyketide synthase, thioesterase domain PF552_04105 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PF552_04105 IPR001242 Condensation domain PF552_04105 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PF552_04105 IPR010071 Amino acid adenylation domain PF552_04105 IPR020845 AMP-binding, conserved site PF552_04105 IPR042099 AMP-dependent synthetase-like superfamily PF552_04130 IPR018654 Putative toxin of bacterial toxin-antitoxin pair PF552_04155 IPR029479 Nitroreductase PF552_04155 IPR000415 Nitroreductase-like PF552_04160 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PF552_04160 IPR036291 NAD(P)-binding domain superfamily PF552_04160 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_04160 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_04170 IPR018197 Glycerate kinase, restriction-enzyme-like fold PF552_04170 IPR018193 Glycerate kinase, flavodoxin-like fold PF552_04170 IPR004381 Glycerate kinase PF552_04170 IPR036129 Glycerate kinase superfamily PF552_04175 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain PF552_04175 IPR010046 Oxidoreductase alpha (molybdopterin) subunit PF552_04175 IPR006656 Molybdopterin oxidoreductase PF552_04175 IPR037951 YdeP-like, MopB domain PF552_04175 IPR009010 Aspartate decarboxylase-like domain superfamily PF552_04180 IPR016193 Cytidine deaminase-like PF552_04180 IPR003786 Sulfur carrier protein FdhD PF552_04185 IPR010652 Domain of unknown function DUF1232 PF552_04190 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain PF552_04190 IPR036291 NAD(P)-binding domain superfamily PF552_04190 IPR020921 Erythronate-4-phosphate dehydrogenase PF552_04190 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PF552_04190 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF552_04190 IPR038251 PdxB, dimerisation domain superfamily PF552_04190 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PF552_04195 IPR004525 Elongation factor P--(R)-beta-lysine ligase PF552_04195 IPR006195 Aminoacyl-tRNA synthetase, class II PF552_04195 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal PF552_04195 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PF552_04205 IPR003593 AAA+ ATPase domain PF552_04205 IPR004504 DNA repair protein RadA PF552_04205 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_04205 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain PF552_04205 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_04205 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PF552_04205 IPR041166 LapB, rubredoxin metal binding domain PF552_04210 IPR004841 Amino acid permease/ SLC12A domain PF552_04210 IPR004840 Amino acid permease, conserved site PF552_04220 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal PF552_04220 IPR029066 PLP-binding barrel PF552_04220 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PF552_04220 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site PF552_04220 IPR000183 Ornithine/DAP/Arg decarboxylase PF552_04220 IPR002986 Diaminopimelate decarboxylase, LysA PF552_04220 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PF552_04220 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal PF552_04225 IPR018510 Diaminopimelate epimerase, active site PF552_04225 IPR001653 Diaminopimelate epimerase, DapF PF552_04230 IPR000073 Alpha/beta hydrolase fold-1 PF552_04230 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase PF552_04230 IPR029058 Alpha/Beta hydrolase fold PF552_04235 IPR004778 Homoserine/Threonine efflux protein PF552_04235 IPR001123 Amino acid exporter protein, LeuE-type PF552_04240 IPR011931 Tyrosine recombinase XerC PF552_04240 IPR011010 DNA breaking-rejoining enzyme, catalytic core PF552_04240 IPR013762 Integrase-like, catalytic domain superfamily PF552_04240 IPR002104 Integrase, catalytic domain PF552_04240 IPR010998 Integrase/recombinase, N-terminal PF552_04240 IPR004107 Integrase, SAM-like, N-terminal PF552_04240 IPR023009 Tyrosine recombinase XerC/XerD PF552_04245 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal PF552_04245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_04245 IPR012255 Electron transfer flavoprotein, beta subunit PF552_04245 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal PF552_04245 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site PF552_04250 IPR029035 DHS-like NAD/FAD-binding domain superfamily PF552_04250 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal PF552_04250 IPR001308 Electron transfer flavoprotein alpha subunit/FixB PF552_04250 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal PF552_04250 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal PF552_04250 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site PF552_04250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_04255 IPR005743 DNA gyrase, subunit A PF552_04255 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat PF552_04255 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PF552_04255 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PF552_04255 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal PF552_04255 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta PF552_04255 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily PF552_04270 IPR001173 Glycosyltransferase 2-like PF552_04270 IPR029044 Nucleotide-diphospho-sugar transferases PF552_04290 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PF552_04300 IPR000192 Aminotransferase class V domain PF552_04300 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PF552_04300 IPR022278 Phosphoserine aminotransferase PF552_04300 IPR015424 Pyridoxal phosphate-dependent transferase PF552_04300 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_04300 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_04315 IPR003791 Protein of unknown function UPF0178 PF552_04325 IPR003838 ABC transporter permease protein domain PF552_04325 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E PF552_04325 IPR025857 MacB-like periplasmic core domain PF552_04330 IPR017871 ABC transporter, conserved site PF552_04330 IPR003593 AAA+ ATPase domain PF552_04330 IPR003439 ABC transporter-like PF552_04330 IPR015854 ABC transporter, lipoprotein release, LolD PF552_04330 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_04335 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_04335 IPR025405 Domain of unknown function DUF4131 PF552_04335 IPR004797 Competence protein ComEC/Rec2 PF552_04335 IPR004477 ComEC/Rec2-related protein PF552_04335 IPR035681 ComA-like, MBL domain PF552_04335 IPR001279 Metallo-beta-lactamase PF552_04345 IPR004670 Na+/H+ antiporter NhaA PF552_04345 IPR029045 ClpP/crotonase-like domain superfamily PF552_04345 IPR023171 Na/H antiporter domain superfamily PF552_04345 IPR002142 Peptidase S49 PF552_04350 IPR000073 Alpha/beta hydrolase fold-1 PF552_04350 IPR029058 Alpha/Beta hydrolase fold PF552_04355 IPR001555 Phosphoribosylglycinamide formyltransferase, active site PF552_04355 IPR004607 Phosphoribosylglycinamide formyltransferase PF552_04355 IPR036477 Formyl transferase, N-terminal domain superfamily PF552_04355 IPR002376 Formyl transferase, N-terminal PF552_04360 IPR016188 PurM-like, N-terminal domain PF552_04360 IPR036676 PurM-like, C-terminal domain superfamily PF552_04360 IPR010918 PurM-like, C-terminal domain PF552_04360 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase PF552_04360 IPR036921 PurM-like, N-terminal domain superfamily PF552_04365 IPR002549 Transmembrane protein TqsA-like PF552_04370 IPR010921 Trp repressor/replication initiator PF552_04370 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_04370 IPR038454 DnaA, N-terminal domain superfamily PF552_04370 IPR024633 DnaA N-terminal domain PF552_04370 IPR013159 Chromosomal replication initiator, DnaA C-terminal PF552_04370 IPR013317 Chromosomal replication initiator protein DnaA PF552_04370 IPR003593 AAA+ ATPase domain PF552_04370 IPR018312 Chromosomal replication control, initiator DnaA, conserved site PF552_04370 IPR020591 Chromosomal replication control, initiator DnaA-like PF552_04370 IPR001957 Chromosomal replication control, initiator DnaA PF552_04400 IPR001537 tRNA/rRNA methyltransferase, SpoU type PF552_04400 IPR029028 Alpha/beta knot methyltransferases PF552_04400 IPR013123 RNA 2-O ribose methyltransferase, substrate binding PF552_04400 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PF552_04400 IPR029064 50S ribosomal protein L30e-like PF552_04405 IPR000146 Fructose-1,6-bisphosphatase class 1 PF552_04405 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal PF552_04405 IPR028343 Fructose-1,6-bisphosphatase PF552_04415 IPR036737 OmpA-like domain superfamily PF552_04415 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal PF552_04415 IPR006665 OmpA-like domain PF552_04415 IPR006664 Outer membrane protein, bacterial PF552_04415 IPR039001 Peptidoglycan-associated lipoprotein PF552_04415 IPR006690 Outer membrane protein, OmpA-like, conserved site PF552_04420 IPR011042 Six-bladed beta-propeller, TolB-like PF552_04420 IPR011659 WD40-like Beta Propeller PF552_04420 IPR014167 Tol-Pal system protein TolB PF552_04420 IPR007195 TolB, N-terminal PF552_04420 IPR036752 TolB, N-terminal domain superfamily PF552_04430 IPR003400 Biopolymer transport protein ExbD/TolR PF552_04430 IPR014168 Tol-Pal system protein TolR PF552_04435 IPR014163 Tol-Pal system, TolQ PF552_04435 IPR002898 MotA/TolQ/ExbB proton channel PF552_04440 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family PF552_04440 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase PF552_04440 IPR006683 Thioesterase domain PF552_04440 IPR029069 HotDog domain superfamily PF552_04440 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site PF552_04445 IPR011650 Peptidase M20, dimerisation domain PF552_04445 IPR017439 Amidohydrolase PF552_04445 IPR036264 Bacterial exopeptidase dimerisation domain PF552_04445 IPR002933 Peptidase M20 PF552_04450 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_04450 IPR036390 Winged helix DNA-binding domain superfamily PF552_04450 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_04450 IPR008824 RuvB-like P-loop domain PF552_04450 IPR008823 RuvB C-terminal winged helix domain PF552_04450 IPR004605 DNA helicase, Holliday junction RuvB-type PF552_04450 IPR041445 RuvB, AAA lid domain PF552_04450 IPR003593 AAA+ ATPase domain PF552_04455 IPR036267 RuvA, C-terminal domain superfamily PF552_04455 IPR011114 Holliday junction DNA helicase RuvA, C-terminal PF552_04455 IPR010994 RuvA domain 2-like PF552_04455 IPR000085 Bacterial DNA recombination protein RuvA PF552_04455 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PF552_04455 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial PF552_04455 IPR012340 Nucleic acid-binding, OB-fold PF552_04460 IPR006674 HD domain PF552_04460 IPR003607 HD/PDEase domain PF552_04460 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily PF552_04460 IPR023024 dNTP triphosphohydrolase, type 3 PF552_04460 IPR006261 dNTP triphosphohydrolase PF552_04460 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal PF552_04465 IPR017926 Glutamine amidotransferase PF552_04465 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily PF552_04465 IPR036921 PurM-like, N-terminal domain superfamily PF552_04465 IPR036676 PurM-like, C-terminal domain superfamily PF552_04465 IPR010918 PurM-like, C-terminal domain PF552_04465 IPR029062 Class I glutamine amidotransferase-like PF552_04465 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal PF552_04465 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain PF552_04465 IPR010073 Phosphoribosylformylglycinamidine synthase PurL PF552_04470 IPR036259 MFS transporter superfamily PF552_04470 IPR020846 Major facilitator superfamily domain PF552_04470 IPR011701 Major facilitator superfamily PF552_04470 IPR004812 Drug resistance transporter Bcr/CmlA subfamily PF552_04480 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PF552_04480 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PF552_04480 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria PF552_04480 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily PF552_04485 IPR029045 ClpP/crotonase-like domain superfamily PF552_04485 IPR001753 Enoyl-CoA hydratase/isomerase PF552_04485 IPR014748 Enoyl-CoA hydratase, C-terminal PF552_04485 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB PF552_04490 IPR004821 Cytidyltransferase-like domain PF552_04490 IPR015797 NUDIX hydrolase-like domain superfamily PF552_04490 IPR020084 NUDIX hydrolase, conserved site PF552_04490 IPR000086 NUDIX hydrolase domain PF552_04490 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_04490 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain PF552_04500 IPR013766 Thioredoxin domain PF552_04500 IPR036249 Thioredoxin-like superfamily PF552_04500 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PF552_04515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_04515 IPR018317 Queuosine biosynthesis protein QueC PF552_04520 IPR007197 Radical SAM PF552_04520 IPR024924 7-carboxy-7-deazaguanine synthase-like PF552_04520 IPR013785 Aldolase-type TIM barrel PF552_04525 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family PF552_04525 IPR018357 Hexapeptide transferase, conserved site PF552_04525 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 PF552_04525 IPR011004 Trimeric LpxA-like superfamily PF552_04525 IPR001451 Hexapeptide repeat PF552_04525 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily PF552_04535 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_04535 IPR036390 Winged helix DNA-binding domain superfamily PF552_04535 IPR000847 Transcription regulator HTH, LysR PF552_04535 IPR005119 LysR, substrate-binding PF552_04535 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain PF552_04540 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_04540 IPR008995 Molybdate/tungstate binding, C-terminal PF552_04540 IPR017871 ABC transporter, conserved site PF552_04540 IPR003439 ABC transporter-like PF552_04540 IPR003593 AAA+ ATPase domain PF552_04540 IPR005666 Sulphate transport system permease protein 1 PF552_04540 IPR024765 TOBE-like domain PF552_04540 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal PF552_04545 IPR011866 Sulphate ABC transporter, permease protein CysW PF552_04545 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_04545 IPR035906 MetI-like superfamily PF552_04545 IPR005667 Sulphate ABC transporter permease protein 2 PF552_04550 IPR035906 MetI-like superfamily PF552_04550 IPR005667 Sulphate ABC transporter permease protein 2 PF552_04550 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_04550 IPR011865 Sulphate ABC transporter, permease protein CysT PF552_04560 IPR000957 Sulphate/thiosulphate-binding, conserved site PF552_04560 IPR034408 Sulphate/thiosulphate-binding site PF552_04560 IPR005669 Thiosulphate/Sulfate-binding protein PF552_04565 IPR036038 Aminotransferase-like, PLP-dependent enzymes PF552_04565 IPR001544 Aminotransferase class IV PF552_04565 IPR017824 Aminodeoxychorismate lyase, class IV PF552_04565 IPR018300 Aminotransferase, class IV, conserved site PF552_04570 IPR003770 Endolytic murein transglycosylase PF552_04575 IPR039430 Thymidylate kinase-like domain PF552_04575 IPR018094 Thymidylate kinase PF552_04575 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_04585 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PF552_04585 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_04585 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily PF552_04585 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal PF552_04585 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily PF552_04585 IPR005288 L-aspartate oxidase PF552_04590 IPR036034 PDZ superfamily PF552_04590 IPR011782 Peptidase S1C, Do PF552_04590 IPR009003 Peptidase S1, PA clan PF552_04590 IPR001940 Peptidase S1C PF552_04590 IPR001478 PDZ domain PF552_04600 IPR016181 Acyl-CoA N-acyltransferase PF552_04600 IPR000182 GNAT domain PF552_04605 IPR035654 Elongation factor 4, domain IV PF552_04605 IPR006297 Elongation factor 4 PF552_04605 IPR035647 EF-G domain III/V-like PF552_04605 IPR000640 Elongation factor EFG, domain V-like PF552_04605 IPR004161 Translation elongation factor EFTu-like, domain 2 PF552_04605 IPR031157 Tr-type G domain, conserved site PF552_04605 IPR038363 LepA, C-terminal domain superfamily PF552_04605 IPR013842 GTP-binding protein LepA, C-terminal PF552_04605 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_04605 IPR005225 Small GTP-binding protein domain PF552_04605 IPR000795 Transcription factor, GTP-binding domain PF552_04610 IPR036286 LexA/Signal peptidase-like superfamily PF552_04610 IPR000223 Peptidase S26A, signal peptidase I PF552_04610 IPR019758 Peptidase S26A, signal peptidase I, conserved site PF552_04610 IPR019757 Peptidase S26A, signal peptidase I, lysine active site PF552_04610 IPR019756 Peptidase S26A, signal peptidase I, serine active site PF552_04610 IPR019533 Peptidase S26 PF552_04620 IPR000999 Ribonuclease III domain PF552_04620 IPR011907 Ribonuclease III PF552_04620 IPR036389 Ribonuclease III, endonuclease domain superfamily PF552_04620 IPR014720 Double-stranded RNA-binding domain PF552_04625 IPR009019 K homology domain superfamily, prokaryotic type PF552_04625 IPR030388 Era-type guanine nucleotide-binding (G) domain PF552_04625 IPR005225 Small GTP-binding protein domain PF552_04625 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_04625 IPR004044 K Homology domain, type 2 PF552_04625 IPR015946 K homology domain-like, alpha/beta PF552_04625 IPR006073 GTP binding domain PF552_04625 IPR005662 GTP-binding protein Era PF552_04635 IPR012340 Nucleic acid-binding, OB-fold PF552_04635 IPR022572 DNA replication/recombination mediator RecO, N-terminal PF552_04635 IPR003717 Recombination protein O, RecO PF552_04635 IPR037278 ARFGAP/RecO-like zinc finger PF552_04640 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ PF552_04640 IPR036130 Pyridoxine 5'-phosphate synthase PF552_04640 IPR013785 Aldolase-type TIM barrel PF552_04645 IPR012347 Ferritin-like PF552_04645 IPR009078 Ferritin-like superfamily PF552_04645 IPR010386 tRNA-hydroxylase MiaE PF552_04650 IPR036291 NAD(P)-binding domain superfamily PF552_04650 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_04650 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_04680 IPR018181 Heat shock protein 70, conserved site PF552_04680 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily PF552_04680 IPR042030 Chaperone protein HscC, nucleotide-binding domain PF552_04680 IPR013126 Heat shock protein 70 family PF552_04690 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site PF552_04690 IPR015424 Pyridoxal phosphate-dependent transferase PF552_04690 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_04690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_04690 IPR004839 Aminotransferase, class I/classII PF552_04700 IPR033416 Periplasmic sensor domain CHASE7 PF552_04700 IPR000160 GGDEF domain PF552_04700 IPR029787 Nucleotide cyclase PF552_04710 IPR036876 UVR domain superfamily PF552_04710 IPR001943 UVR domain PF552_04710 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_04710 IPR006935 Helicase/UvrB, N-terminal PF552_04710 IPR001650 Helicase, C-terminal PF552_04710 IPR041471 UvrB, interaction domain PF552_04710 IPR024759 UvrB, YAD/RRR-motif-containing domain PF552_04710 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_04710 IPR004807 UvrABC system, subunit B PF552_04720 IPR000620 EamA domain PF552_04720 IPR004626 RarD protein PF552_04725 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I PF552_04725 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain PF552_04725 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain PF552_04725 IPR036291 NAD(P)-binding domain superfamily PF552_04725 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family PF552_04725 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site PF552_04740 IPR031167 OBG-type guanine nucleotide-binding (G) domain PF552_04740 IPR035101 GTP-binding protein, Obg-type PF552_04740 IPR014100 GTP-binding protein Obg/CgtA PF552_04740 IPR006074 GTP1/OBG, conserved site PF552_04740 IPR006169 GTP1/OBG domain PF552_04740 IPR036726 GTP1/OBG domain superfamily PF552_04740 IPR006073 GTP binding domain PF552_04740 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_04745 IPR036393 Acetylglutamate kinase-like superfamily PF552_04745 IPR001048 Aspartate/glutamate/uridylate kinase PF552_04745 IPR041739 Glutamate-5-kinase domain PF552_04745 IPR001057 Glutamate/acetylglutamate kinase PF552_04745 IPR011529 Glutamate 5-kinase PF552_04745 IPR019797 Glutamate 5-kinase, conserved site PF552_04745 IPR002478 PUA domain PF552_04745 IPR015947 PUA-like superfamily PF552_04745 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase PF552_04745 IPR036974 PUA domain superfamily PF552_04755 IPR011673 Protein of unknown function DUF1615 PF552_04760 IPR013785 Aldolase-type TIM barrel PF552_04760 IPR035587 DUS-like, FMN-binding domain PF552_04760 IPR032887 tRNA-dihydrouridine synthase B PF552_04760 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal PF552_04760 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 PF552_04760 IPR001269 tRNA-dihydrouridine synthase PF552_04760 IPR018517 tRNA-dihydrouridine synthase, conserved site PF552_04765 IPR004136 Nitronate monooxygenase PF552_04765 IPR013785 Aldolase-type TIM barrel PF552_04775 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PF552_04780 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_04780 IPR023753 FAD/NAD(P)-binding domain PF552_04785 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal PF552_04785 IPR012338 Beta-lactamase/transpeptidase-like PF552_04785 IPR015956 Penicillin-binding protein, C-terminal domain superfamily PF552_04785 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A PF552_04785 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal PF552_04785 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily PF552_04795 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric PF552_04800 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PF552_04800 IPR006145 Pseudouridine synthase, RsuA/RluA PF552_04800 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PF552_04800 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PF552_04800 IPR020103 Pseudouridine synthase, catalytic domain superfamily PF552_04895 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily PF552_04895 IPR007694 DNA helicase, DnaB-like, C-terminal PF552_04895 IPR007693 DNA helicase, DnaB-like, N-terminal PF552_04895 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_04895 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PF552_05000 IPR006944 Bacteriophage/Gene transfer agent portal protein PF552_05135 IPR002104 Integrase, catalytic domain PF552_05135 IPR013762 Integrase-like, catalytic domain superfamily PF552_05135 IPR038488 Integrase, DNA-binding domain superfamily PF552_05135 IPR025166 Integrase, DNA-binding domain PF552_05135 IPR010998 Integrase/recombinase, N-terminal PF552_05135 IPR011010 DNA breaking-rejoining enzyme, catalytic core PF552_05140 IPR024084 Isopropylmalate dehydrogenase-like domain PF552_05140 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site PF552_05140 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic PF552_05160 IPR010645 Uncharacterised MFS-type transporter YbfB PF552_05160 IPR036259 MFS transporter superfamily PF552_05165 IPR036390 Winged helix DNA-binding domain superfamily PF552_05165 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_05165 IPR000847 Transcription regulator HTH, LysR PF552_05165 IPR005119 LysR, substrate-binding PF552_05170 IPR036458 Sodium:dicarboxylate symporter superfamily PF552_05170 IPR001991 Sodium:dicarboxylate symporter PF552_05175 IPR003719 Phenazine biosynthesis PhzF protein PF552_05180 IPR007863 Peptidase M16, C-terminal PF552_05180 IPR011765 Peptidase M16, N-terminal PF552_05180 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like PF552_05180 IPR001431 Peptidase M16, zinc-binding site PF552_05205 IPR013785 Aldolase-type TIM barrel PF552_05205 IPR036206 Thiamin phosphate synthase superfamily PF552_05205 IPR034291 Thiamine phosphate synthase PF552_05205 IPR022998 Thiamine phosphate synthase/TenI PF552_05210 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase PF552_05210 IPR005814 Aminotransferase class-III PF552_05210 IPR015424 Pyridoxal phosphate-dependent transferase PF552_05210 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_05210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_05220 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PF552_05220 IPR006145 Pseudouridine synthase, RsuA/RluA PF552_05220 IPR020103 Pseudouridine synthase, catalytic domain superfamily PF552_05225 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_05225 IPR001650 Helicase, C-terminal PF552_05225 IPR023949 RNA polymerase-associated protein RapA PF552_05225 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_05225 IPR022737 RNA polymerase recycling, bacterial, C-terminal PF552_05225 IPR038718 SNF2-like, N-terminal domain superfamily PF552_05225 IPR000330 SNF2-related, N-terminal domain PF552_05225 IPR040766 RapA, N-terminal Tudor-like domain 2 PF552_05225 IPR040765 RapA, N-terminal Tudor like domain 1 PF552_05235 IPR009057 Homeobox-like domain superfamily PF552_05235 IPR023764 Transcriptional repressor HTH, FabR PF552_05235 IPR001647 DNA-binding HTH domain, TetR-type PF552_05240 IPR000951 Phthalate dioxygenase reductase PF552_05240 IPR036010 2Fe-2S ferredoxin-like superfamily PF552_05240 IPR012675 Beta-grasp domain superfamily PF552_05240 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PF552_05240 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_05240 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_05240 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_05240 IPR017938 Riboflavin synthase-like beta-barrel PF552_05240 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PF552_05245 IPR005804 Fatty acid desaturase domain PF552_05255 IPR041347 MftR, C-terminal PF552_05255 IPR009057 Homeobox-like domain superfamily PF552_05255 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PF552_05255 IPR001647 DNA-binding HTH domain, TetR-type PF552_05265 IPR004637 2,4-diaminobutyrate 4-transaminase PF552_05265 IPR015424 Pyridoxal phosphate-dependent transferase PF552_05265 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_05265 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_05265 IPR005814 Aminotransferase class-III PF552_05270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_05270 IPR021115 Pyridoxal-phosphate binding site PF552_05270 IPR015424 Pyridoxal phosphate-dependent transferase PF552_05270 IPR002129 Pyridoxal phosphate-dependent decarboxylase PF552_05275 IPR016161 Aldehyde/histidinol dehydrogenase PF552_05275 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_05275 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_05275 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_05275 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_05275 IPR015590 Aldehyde dehydrogenase domain PF552_05280 IPR011008 Dimeric alpha-beta barrel PF552_05280 IPR019888 Transcription regulator AsnC-type PF552_05280 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PF552_05280 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PF552_05280 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_05280 IPR036390 Winged helix DNA-binding domain superfamily PF552_05280 IPR000485 AsnC-type HTH domain PF552_05280 IPR011991 ArsR-like helix-turn-helix domain PF552_05285 IPR029035 DHS-like NAD/FAD-binding domain superfamily PF552_05285 IPR029061 Thiamin diphosphate-binding fold PF552_05285 IPR012000 Thiamine pyrophosphate enzyme, central domain PF552_05285 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PF552_05285 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme PF552_05285 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PF552_05290 IPR004841 Amino acid permease/ SLC12A domain PF552_05290 IPR004840 Amino acid permease, conserved site PF552_05295 IPR011862 Phosphate binding protein PF552_05295 IPR024370 PBP domain PF552_05300 IPR011864 Phosphate ABC transporter, permease protein PstC PF552_05300 IPR035906 MetI-like superfamily PF552_05300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_05305 IPR005672 Phosphate transport system permease protein PstA PF552_05305 IPR035906 MetI-like superfamily PF552_05305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_05310 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_05310 IPR003439 ABC transporter-like PF552_05310 IPR003593 AAA+ ATPase domain PF552_05310 IPR015850 ABC transporter, phosphate import, PstB PF552_05310 IPR005670 Phosphate transport system permease protein 1 PF552_05310 IPR017871 ABC transporter, conserved site PF552_05315 IPR013703 Peptidase S49, N-terminal proteobacteria PF552_05315 IPR002142 Peptidase S49 PF552_05315 IPR029045 ClpP/crotonase-like domain superfamily PF552_05330 IPR008948 L-Aspartase-like PF552_05330 IPR022761 Fumarate lyase, N-terminal PF552_05330 IPR000362 Fumarate lyase family PF552_05330 IPR020557 Fumarate lyase, conserved site PF552_05330 IPR024083 Fumarase/histidase, N-terminal PF552_05330 IPR013539 Adenylosuccinate lyase PurB, C-terminal PF552_05330 IPR004769 Adenylosuccinate lyase PF552_05335 IPR035932 HflD-like superfamily PF552_05335 IPR007451 High frequency lysogenization protein HflD PF552_05340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_05340 IPR004506 tRNA-specific 2-thiouridylase PF552_05340 IPR023382 Adenine nucleotide alpha hydrolase-like domains PF552_05345 IPR020084 NUDIX hydrolase, conserved site PF552_05345 IPR015797 NUDIX hydrolase-like domain superfamily PF552_05345 IPR020476 NUDIX hydrolase PF552_05345 IPR023214 HAD superfamily PF552_05345 IPR006357 HAD-superfamily hydrolase, subfamily IIA PF552_05345 IPR036412 HAD-like superfamily PF552_05345 IPR000086 NUDIX hydrolase domain PF552_05350 IPR011004 Trimeric LpxA-like superfamily PF552_05350 IPR001451 Hexapeptide repeat PF552_05355 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily PF552_05355 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A PF552_05355 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal PF552_05355 IPR015956 Penicillin-binding protein, C-terminal domain superfamily PF552_05355 IPR012338 Beta-lactamase/transpeptidase-like PF552_05355 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal PF552_05370 IPR002828 Survival protein SurE-like phosphatase/nucleotidase PF552_05370 IPR036523 SurE-like phosphatase/nucleotidase superfamily PF552_05370 IPR030048 Survival protein SurE PF552_05375 IPR016047 Peptidase M23 PF552_05375 IPR036779 LysM domain superfamily PF552_05375 IPR018392 LysM domain PF552_05375 IPR011055 Duplicated hybrid motif PF552_05380 IPR036390 Winged helix DNA-binding domain superfamily PF552_05380 IPR005119 LysR, substrate-binding PF552_05380 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_05380 IPR000847 Transcription regulator HTH, LysR PF552_05385 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PF552_05385 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_05385 IPR041699 Lon protease, AAA domain PF552_05385 IPR008269 Peptidase S16, Lon proteolytic domain PF552_05385 IPR027065 Lon protease PF552_05390 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 PF552_05390 IPR011701 Major facilitator superfamily PF552_05390 IPR036259 MFS transporter superfamily PF552_05390 IPR020846 Major facilitator superfamily domain PF552_05395 IPR037523 Vicinal oxygen chelate (VOC) domain PF552_05395 IPR018146 Glyoxalase I, conserved site PF552_05395 IPR004361 Glyoxalase I PF552_05395 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PF552_05395 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PF552_05400 IPR016833 Putative sodium bile acid cotransporter PF552_05400 IPR038770 Sodium/solute symporter superfamily PF552_05405 IPR034704 L28p-like PF552_05405 IPR002150 Ribosomal protein L31 PF552_05405 IPR027491 Ribosomal protein L31 type A PF552_05405 IPR042105 Ribosomal protein L31 superfamily PF552_05410 IPR035919 EAL domain superfamily PF552_05410 IPR001633 EAL domain PF552_05410 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PF552_05420 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase PF552_05420 IPR022462 Lysine-2,3-aminomutase-like PF552_05420 IPR013785 Aldolase-type TIM barrel PF552_05420 IPR007197 Radical SAM PF552_05425 IPR008991 Translation protein SH3-like domain superfamily PF552_05425 IPR001059 Translation elongation factor P/YeiP, central PF552_05425 IPR015365 Elongation factor P, C-terminal PF552_05425 IPR012340 Nucleic acid-binding, OB-fold PF552_05425 IPR014722 Ribosomal protein L2, domain 2 PF552_05425 IPR011768 Translation elongation factor P PF552_05425 IPR020599 Translation elongation factor P/YeiP PF552_05425 IPR013185 Translation elongation factor, KOW-like PF552_05430 IPR025299 CstA, C-terminal domain PF552_05430 IPR003706 CstA, N-terminal domain PF552_05435 IPR007423 Selenoprotein, putative PF552_05455 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_05455 IPR036291 NAD(P)-binding domain superfamily PF552_05475 IPR000868 Isochorismatase-like PF552_05475 IPR036380 Isochorismatase-like superfamily PF552_05480 IPR036390 Winged helix DNA-binding domain superfamily PF552_05480 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_05480 IPR000847 Transcription regulator HTH, LysR PF552_05480 IPR005119 LysR, substrate-binding PF552_05490 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_05490 IPR020946 Flavin monooxygenase-like PF552_05495 IPR029058 Alpha/Beta hydrolase fold PF552_05495 IPR000639 Epoxide hydrolase-like PF552_05495 IPR000073 Alpha/beta hydrolase fold-1 PF552_05505 IPR001509 NAD-dependent epimerase/dehydratase PF552_05505 IPR017829 Hopanoid-associated sugar epimerase PF552_05505 IPR036291 NAD(P)-binding domain superfamily PF552_05510 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PF552_05510 IPR018060 DNA binding HTH domain, AraC-type PF552_05510 IPR020449 Transcription regulator HTH, AraC- type PF552_05510 IPR009057 Homeobox-like domain superfamily PF552_05515 IPR013149 Alcohol dehydrogenase, C-terminal PF552_05515 IPR041694 Oxidoreductase, N-terminal domain PF552_05515 IPR011032 GroES-like superfamily PF552_05515 IPR036291 NAD(P)-binding domain superfamily PF552_05515 IPR020843 Polyketide synthase, enoylreductase domain PF552_05520 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_05520 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_05520 IPR036291 NAD(P)-binding domain superfamily PF552_05525 IPR009057 Homeobox-like domain superfamily PF552_05525 IPR018062 HTH domain AraC-type, conserved site PF552_05525 IPR032783 AraC-type transcription regulator, ligand-binding domain PF552_05525 IPR018060 DNA binding HTH domain, AraC-type PF552_05545 IPR012093 Pirin PF552_05545 IPR003829 Pirin, N-terminal domain PF552_05545 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain PF552_05545 IPR011051 RmlC-like cupin domain superfamily PF552_05545 IPR014710 RmlC-like jelly roll fold PF552_05550 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PF552_05550 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PF552_05550 IPR001926 Pyridoxal-phosphate dependent enzyme PF552_05555 IPR039446 Transcriptional regulator DauR-like PF552_05555 IPR039445 Transcriptional regulator DauR-like, HTH domain PF552_05555 IPR013559 YheO-like PF552_05565 IPR010060 Non-ribosomal peptide synthase PF552_05565 IPR001242 Condensation domain PF552_05565 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PF552_05565 IPR009081 Phosphopantetheine binding ACP domain PF552_05565 IPR006162 Phosphopantetheine attachment site PF552_05565 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PF552_05565 IPR042099 AMP-dependent synthetase-like superfamily PF552_05565 IPR025110 AMP-binding enzyme, C-terminal domain PF552_05565 IPR020845 AMP-binding, conserved site PF552_05565 IPR000873 AMP-dependent synthetase/ligase PF552_05565 IPR010071 Amino acid adenylation domain PF552_05565 IPR036736 ACP-like superfamily PF552_05570 IPR010071 Amino acid adenylation domain PF552_05570 IPR029058 Alpha/Beta hydrolase fold PF552_05570 IPR025110 AMP-binding enzyme, C-terminal domain PF552_05570 IPR020845 AMP-binding, conserved site PF552_05570 IPR000873 AMP-dependent synthetase/ligase PF552_05570 IPR042099 AMP-dependent synthetase-like superfamily PF552_05570 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PF552_05570 IPR001242 Condensation domain PF552_05570 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PF552_05570 IPR020802 Polyketide synthase, thioesterase domain PF552_05570 IPR001031 Thioesterase PF552_05570 IPR036736 ACP-like superfamily PF552_05570 IPR009081 Phosphopantetheine binding ACP domain PF552_05580 IPR000522 ABC transporter, permease protein, BtuC-like PF552_05580 IPR037294 ABC transporter, BtuC-like PF552_05585 IPR000522 ABC transporter, permease protein, BtuC-like PF552_05585 IPR037294 ABC transporter, BtuC-like PF552_05590 IPR017871 ABC transporter, conserved site PF552_05590 IPR003439 ABC transporter-like PF552_05590 IPR003593 AAA+ ATPase domain PF552_05590 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_05595 IPR002491 ABC transporter periplasmic binding domain PF552_05595 IPR033870 FatB domain PF552_05600 IPR030149 TonB-dependent siderophore receptor FcuA/FatA PF552_05600 IPR012910 TonB-dependent receptor, plug domain PF552_05600 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_05600 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_05600 IPR039423 TonB-dependent receptor-like PF552_05600 IPR010917 TonB-dependent receptor, conserved site PF552_05600 IPR010105 TonB-dependent siderophore receptor PF552_05600 IPR010916 TonB box, conserved site PF552_05600 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_05605 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase PF552_05605 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_05605 IPR031043 Putative histamine N-monooxygenase PF552_05610 IPR042099 AMP-dependent synthetase-like superfamily PF552_05610 IPR001242 Condensation domain PF552_05610 IPR006162 Phosphopantetheine attachment site PF552_05610 IPR009081 Phosphopantetheine binding ACP domain PF552_05610 IPR000873 AMP-dependent synthetase/ligase PF552_05610 IPR020845 AMP-binding, conserved site PF552_05610 IPR036736 ACP-like superfamily PF552_05610 IPR029058 Alpha/Beta hydrolase fold PF552_05610 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PF552_05610 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PF552_05610 IPR010071 Amino acid adenylation domain PF552_05615 IPR025110 AMP-binding enzyme, C-terminal domain PF552_05615 IPR020845 AMP-binding, conserved site PF552_05615 IPR000873 AMP-dependent synthetase/ligase PF552_05615 IPR042099 AMP-dependent synthetase-like superfamily PF552_05615 IPR011963 2,3-dihydroxybenzoate-AMP ligase PF552_05620 IPR036736 ACP-like superfamily PF552_05620 IPR016291 Isochorismatase PF552_05620 IPR000868 Isochorismatase-like PF552_05620 IPR036380 Isochorismatase-like superfamily PF552_05620 IPR009081 Phosphopantetheine binding ACP domain PF552_05625 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_05625 IPR023523 Histidine decarboxylase, bacteria PF552_05625 IPR002129 Pyridoxal phosphate-dependent decarboxylase PF552_05625 IPR015424 Pyridoxal phosphate-dependent transferase PF552_05625 IPR021115 Pyridoxal-phosphate binding site PF552_05635 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_05635 IPR017871 ABC transporter, conserved site PF552_05635 IPR003439 ABC transporter-like PF552_05635 IPR036640 ABC transporter type 1, transmembrane domain superfamily PF552_05635 IPR011527 ABC transporter type 1, transmembrane domain PF552_05635 IPR003593 AAA+ ATPase domain PF552_05640 IPR017871 ABC transporter, conserved site PF552_05640 IPR003593 AAA+ ATPase domain PF552_05640 IPR036640 ABC transporter type 1, transmembrane domain superfamily PF552_05640 IPR011527 ABC transporter type 1, transmembrane domain PF552_05640 IPR003439 ABC transporter-like PF552_05640 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_05645 IPR001031 Thioesterase PF552_05645 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS PF552_05645 IPR029058 Alpha/Beta hydrolase fold PF552_05650 IPR003542 Enterobactin synthetase-like, component D PF552_05650 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain PF552_05650 IPR037143 4'-phosphopantetheinyl transferase domain superfamily PF552_05650 IPR008278 4'-phosphopantetheinyl transferase domain PF552_05655 IPR004561 Isochorismate synthase PF552_05655 IPR005801 ADC synthase PF552_05655 IPR015890 Chorismate-utilising enzyme, C-terminal PF552_05665 IPR000257 Uroporphyrinogen decarboxylase (URO-D) PF552_05665 IPR038071 UROD/MetE-like superfamily PF552_05665 IPR006361 Uroporphyrinogen decarboxylase HemE PF552_05670 IPR008535 Protein of unknown function DUF817 PF552_05685 IPR001466 Beta-lactamase-related PF552_05685 IPR012338 Beta-lactamase/transpeptidase-like PF552_05685 IPR001586 Beta-lactamase, class-C active site PF552_05690 IPR001474 GTP cyclohydrolase I PF552_05690 IPR018234 GTP cyclohydrolase I, conserved site PF552_05690 IPR020602 GTP cyclohydrolase I domain PF552_05695 IPR036884 [2Fe-2S]-binding domain superfamily PF552_05695 IPR002888 [2Fe-2S]-binding PF552_05695 IPR012675 Beta-grasp domain superfamily PF552_05695 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PF552_05695 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PF552_05695 IPR036010 2Fe-2S ferredoxin-like superfamily PF552_05700 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily PF552_05700 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding PF552_05700 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily PF552_05700 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PF552_05715 IPR001468 Indole-3-glycerol phosphate synthase, conserved site PF552_05715 IPR013785 Aldolase-type TIM barrel PF552_05715 IPR013798 Indole-3-glycerol phosphate synthase PF552_05715 IPR011060 Ribulose-phosphate binding barrel PF552_05720 IPR000312 Glycosyl transferase, family 3 PF552_05720 IPR005940 Anthranilate phosphoribosyl transferase PF552_05720 IPR017459 Glycosyl transferase family 3, N-terminal domain PF552_05720 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily PF552_05720 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily PF552_05725 IPR010917 TonB-dependent receptor, conserved site PF552_05725 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_05725 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_05725 IPR010916 TonB box, conserved site PF552_05725 IPR012910 TonB-dependent receptor, plug domain PF552_05725 IPR039426 Vitamin B12 transporter BtuB-like PF552_05725 IPR010101 TonB-dependent vitamin B12 transporter BtuB PF552_05725 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_05730 IPR042097 Aminopeptidase N-like , N-terminal PF552_05730 IPR024571 ERAP1-like C-terminal domain PF552_05730 IPR034016 Aminopeptidase N-type PF552_05730 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase PF552_05730 IPR014782 Peptidase M1, membrane alanine aminopeptidase PF552_05735 IPR017926 Glutamine amidotransferase PF552_05735 IPR029062 Class I glutamine amidotransferase-like PF552_05735 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain PF552_05745 IPR036259 MFS transporter superfamily PF552_05745 IPR020846 Major facilitator superfamily domain PF552_05745 IPR005279 Dipeptide/tripeptide permease PF552_05745 IPR000109 Proton-dependent oligopeptide transporter family PF552_05745 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site PF552_05750 IPR004809 Glutamine synthetase type I PF552_05750 IPR027303 Glutamine synthetase, glycine-rich site PF552_05750 IPR008146 Glutamine synthetase, catalytic domain PF552_05750 IPR001637 Glutamine synthetase class-I, adenylation site PF552_05750 IPR027302 Glutamine synthetase, N-terminal conserved site PF552_05750 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PF552_05750 IPR036651 Glutamine synthetase, N-terminal domain superfamily PF552_05750 IPR008147 Glutamine synthetase, beta-Grasp domain PF552_05755 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PF552_05755 IPR007440 Chorismate--pyruvate lyase PF552_05760 IPR000537 UbiA prenyltransferase family PF552_05760 IPR039653 Prenyltransferase PF552_05760 IPR006370 4-hydroxybenzoate polyprenyltransferase-like PF552_05795 IPR019833 Manganese/iron superoxide dismutase, binding site PF552_05795 IPR019831 Manganese/iron superoxide dismutase, N-terminal PF552_05795 IPR001189 Manganese/iron superoxide dismutase PF552_05795 IPR019832 Manganese/iron superoxide dismutase, C-terminal PF552_05795 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily PF552_05795 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily PF552_05800 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily PF552_05800 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PF552_05805 IPR009003 Peptidase S1, PA clan PF552_05805 IPR011782 Peptidase S1C, Do PF552_05805 IPR036034 PDZ superfamily PF552_05805 IPR001478 PDZ domain PF552_05805 IPR001940 Peptidase S1C PF552_05810 IPR012006 tRNA nucleotidyltransferase, proteobacteria PF552_05810 IPR003607 HD/PDEase domain PF552_05810 IPR002646 Poly A polymerase, head domain PF552_05810 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PF552_05815 IPR002505 Phosphate acetyl/butaryl transferase PF552_05815 IPR042112 Phosphate acetyltransferase, domain 2 PF552_05815 IPR042113 Phosphate acetyltransferase, domain 1 PF552_05815 IPR036291 NAD(P)-binding domain superfamily PF552_05815 IPR012302 Malic enzyme, NAD-binding PF552_05815 IPR037062 Malic enzyme, N-terminal domain superfamily PF552_05815 IPR012301 Malic enzyme, N-terminal domain PF552_05815 IPR012188 NAD(P)-dependent malic enzyme PF552_05815 IPR015884 Malic enzyme, conserved site PF552_05820 IPR001633 EAL domain PF552_05820 IPR035919 EAL domain superfamily PF552_05820 IPR000160 GGDEF domain PF552_05820 IPR005330 MHYT domain PF552_05820 IPR029787 Nucleotide cyclase PF552_05825 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PF552_05825 IPR006700 Ribosomal RNA small subunit methyltransferase E PF552_05825 IPR015947 PUA-like superfamily PF552_05825 IPR029028 Alpha/beta knot methyltransferases PF552_05830 IPR029041 FAD-linked oxidoreductase-like PF552_05830 IPR003171 Methylenetetrahydrofolate reductase PF552_05830 IPR004620 5,10-methylenetetrahydrofolate reductase PF552_05835 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site PF552_05835 IPR036291 NAD(P)-binding domain superfamily PF552_05835 IPR000043 Adenosylhomocysteinase-like PF552_05835 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PF552_05835 IPR042172 Adenosylhomocysteinase-like superfamily PF552_05850 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type PF552_05850 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_05850 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_05850 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_05850 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_05850 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_05855 IPR013785 Aldolase-type TIM barrel PF552_05855 IPR006638 Elp3/MiaB/NifB PF552_05855 IPR007197 Radical SAM PF552_05855 IPR003698 Lipoyl synthase PF552_05860 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_05860 IPR023753 FAD/NAD(P)-binding domain PF552_05860 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PF552_05860 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I PF552_05860 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF552_05860 IPR022962 Soluble pyridine nucleotide transhydrogenase PF552_05870 IPR020846 Major facilitator superfamily domain PF552_05870 IPR011701 Major facilitator superfamily PF552_05870 IPR004737 Nitrate transporter PF552_05870 IPR036259 MFS transporter superfamily PF552_05880 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 PF552_05880 IPR001714 Peptidase M24, methionine aminopeptidase PF552_05880 IPR000994 Peptidase M24 PF552_05880 IPR036005 Creatinase/aminopeptidase-like PF552_05885 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily PF552_05885 IPR018130 Ribosomal protein S2, conserved site PF552_05885 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid PF552_05885 IPR001865 Ribosomal protein S2 PF552_05890 IPR009060 UBA-like superfamily PF552_05890 IPR018101 Translation elongation factor Ts, conserved site PF552_05890 IPR001816 Translation elongation factor EFTs/EF1B PF552_05890 IPR036402 Elongation factor Ts, dimerisation domain superfamily PF552_05890 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation PF552_05900 IPR009057 Homeobox-like domain superfamily PF552_05900 IPR018060 DNA binding HTH domain, AraC-type PF552_05900 IPR018062 HTH domain AraC-type, conserved site PF552_05900 IPR011051 RmlC-like cupin domain superfamily PF552_05920 IPR007730 Sporulation-like domain PF552_05920 IPR012997 Rare lipoprotein A PF552_05920 IPR009009 RlpA-like protein, double-psi beta-barrel domain PF552_05920 IPR034718 Endolytic peptidoglycan transglycosylase RlpA PF552_05920 IPR036908 RlpA-like domain superfamily PF552_05925 IPR023346 Lysozyme-like domain superfamily PF552_05925 IPR011757 Lytic transglycosylase MltB PF552_05925 IPR031304 Transglycosylase SLT domain 2 PF552_05930 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site PF552_05930 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA PF552_05930 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB PF552_05940 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 PF552_05940 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal PF552_05940 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF PF552_05945 IPR013525 ABC-2 type transporter PF552_05945 IPR000412 ABC-2 transporter PF552_05950 IPR017871 ABC transporter, conserved site PF552_05950 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_05950 IPR003593 AAA+ ATPase domain PF552_05950 IPR003439 ABC transporter-like PF552_05980 IPR015424 Pyridoxal phosphate-dependent transferase PF552_05980 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_05980 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_05980 IPR001085 Serine hydroxymethyltransferase PF552_05980 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site PF552_05980 IPR039429 Serine hydroxymethyltransferase-like domain PF552_05985 IPR003423 Outer membrane efflux protein PF552_05985 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PF552_05990 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PF552_05990 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PF552_05990 IPR001036 Acriflavin resistance protein PF552_05995 IPR022824 Multidrug resistance protein MdtA PF552_05995 IPR006143 RND efflux pump, membrane fusion protein PF552_05995 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PF552_06000 IPR005119 LysR, substrate-binding PF552_06000 IPR000847 Transcription regulator HTH, LysR PF552_06000 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_06000 IPR036390 Winged helix DNA-binding domain superfamily PF552_06005 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter PF552_06005 IPR018313 Solute-binding protein family 3, conserved site PF552_06005 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PF552_06010 IPR030199 Histidine transport system permease protein HisQ PF552_06010 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain PF552_06010 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_06010 IPR035906 MetI-like superfamily PF552_06015 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain PF552_06015 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_06015 IPR035906 MetI-like superfamily PF552_06020 IPR003593 AAA+ ATPase domain PF552_06020 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type PF552_06020 IPR003439 ABC transporter-like PF552_06020 IPR017871 ABC transporter, conserved site PF552_06020 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_06025 IPR000390 Small multidrug resistance protein family PF552_06030 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PF552_06030 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PF552_06035 IPR001539 Peptidase U32 PF552_06035 IPR032525 Peptidase family U32, C-terminal PF552_06040 IPR036390 Winged helix DNA-binding domain superfamily PF552_06040 IPR000524 Transcription regulator HTH, GntR PF552_06040 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_06040 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_06040 IPR004839 Aminotransferase, class I/classII PF552_06040 IPR015424 Pyridoxal phosphate-dependent transferase PF552_06040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_06045 IPR003719 Phenazine biosynthesis PhzF protein PF552_06050 IPR017938 Riboflavin synthase-like beta-barrel PF552_06050 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_06050 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_06050 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PF552_06050 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_06050 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PF552_06050 IPR033892 Ferredoxin--NADP reductase, bacteria PF552_06055 IPR023370 TrmO-like, N-terminal domain PF552_06055 IPR041369 TrmO, C-terminal PF552_06055 IPR023368 Uncharacterised protein family UPF0066, conserved site PF552_06055 IPR040372 YaeB-like PF552_06055 IPR036413 YaeB-like superfamily PF552_06055 IPR036414 YaeB, N-terminal domain superfamily PF552_06065 IPR042181 Type II secretion system, protein E, N-terminal PF552_06065 IPR007831 General secretory system II, protein E, N-terminal PF552_06065 IPR037257 General secretory system II, protein E, N-terminal superfamily PF552_06065 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_06065 IPR013374 ATPase, type IV, pilus assembly, PilB PF552_06065 IPR003593 AAA+ ATPase domain PF552_06065 IPR001482 Type II/IV secretion system protein PF552_06075 IPR011006 CheY-like superfamily PF552_06075 IPR001867 OmpR/PhoB-type DNA-binding domain PF552_06075 IPR016032 Signal transduction response regulator, C-terminal effector PF552_06075 IPR001789 Signal transduction response regulator, receiver domain PF552_06075 IPR039420 Transcriptional regulatory protein WalR-like PF552_06075 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_06080 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_06080 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_06080 IPR013727 Two-component sensor kinase, N-terminal PF552_06080 IPR005467 Histidine kinase domain PF552_06080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_06080 IPR003594 Histidine kinase/HSP90-like ATPase PF552_06080 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_06090 IPR000086 NUDIX hydrolase domain PF552_06090 IPR020476 NUDIX hydrolase PF552_06090 IPR015797 NUDIX hydrolase-like domain superfamily PF552_06090 IPR003561 Mutator MutT PF552_06090 IPR020084 NUDIX hydrolase, conserved site PF552_06100 IPR012338 Beta-lactamase/transpeptidase-like PF552_06100 IPR001264 Glycosyl transferase, family 51 PF552_06100 IPR023346 Lysozyme-like domain superfamily PF552_06100 IPR011813 Penicillin-binding protein 1B PF552_06100 IPR036950 Penicillin binding protein transglycosylase domain PF552_06100 IPR001460 Penicillin-binding protein, transpeptidase PF552_06100 IPR028166 Bifunctional transglycosylase second domain PF552_06105 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal PF552_06105 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal PF552_06105 IPR002504 NAD kinase PF552_06105 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PF552_06110 IPR009749 Protein of unknown function DUF1315 PF552_06115 IPR005940 Anthranilate phosphoribosyl transferase PF552_06115 IPR000312 Glycosyl transferase, family 3 PF552_06115 IPR017459 Glycosyl transferase family 3, N-terminal domain PF552_06115 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily PF552_06115 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily PF552_06120 IPR023954 C4-dicarboxylate transport protein PF552_06120 IPR036458 Sodium:dicarboxylate symporter superfamily PF552_06120 IPR018107 Sodium:dicarboxylate symporter, conserved site PF552_06120 IPR001991 Sodium:dicarboxylate symporter PF552_06125 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_06125 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_06125 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_06125 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_06125 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_06125 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_06125 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_06130 IPR029058 Alpha/Beta hydrolase fold PF552_06130 IPR000801 Putative esterase PF552_06135 IPR018528 Prephenate dehydratase, conserved site PF552_06135 IPR001086 Prephenate dehydratase PF552_06135 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain PF552_06135 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase PF552_06135 IPR036979 Chorismate mutase domain superfamily PF552_06135 IPR036263 Chorismate mutase type II superfamily PF552_06135 IPR002701 Chorismate mutase II, prokaryotic-type PF552_06135 IPR002912 ACT domain PF552_06140 IPR001986 Enolpyruvate transferase domain PF552_06140 IPR036968 Enolpyruvate transferase domain superfamily PF552_06140 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase PF552_06140 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site PF552_06140 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta PF552_06155 IPR002933 Peptidase M20 PF552_06155 IPR011650 Peptidase M20, dimerisation domain PF552_06155 IPR001160 Peptidase M20C, Xaa-His dipeptidase PF552_06160 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta PF552_06160 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site PF552_06160 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily PF552_06160 IPR000228 RNA 3'-terminal phosphate cyclase PF552_06160 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily PF552_06160 IPR023797 RNA 3'-terminal phosphate cyclase domain PF552_06160 IPR017770 RNA 3'-terminal phosphate cyclase type 1 PF552_06160 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain PF552_06175 IPR001233 tRNA-splicing ligase, RtcB PF552_06175 IPR036025 tRNA-splicing ligase RtcB-like superfamily PF552_06180 IPR001279 Metallo-beta-lactamase PF552_06180 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_06180 IPR013471 Ribonuclease Z/BN PF552_06185 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PF552_06185 IPR017183 Sigma54-dependent transcriptional activator, RtcR PF552_06185 IPR009715 Regulator of RNA terminal phosphate cyclase PF552_06185 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_06185 IPR003593 AAA+ ATPase domain PF552_06185 IPR002078 RNA polymerase sigma factor 54 interaction domain PF552_06195 IPR005583 Peroxide stress protein YaaA PF552_06205 IPR013785 Aldolase-type TIM barrel PF552_06205 IPR033983 Thiazole synthase ThiG PF552_06205 IPR008867 Thiazole synthase PF552_06215 IPR006696 Protein of unknown function DUF423 PF552_06220 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria PF552_06220 IPR013324 RNA polymerase sigma factor, region 3/4-like PF552_06220 IPR007630 RNA polymerase sigma-70 region 4 PF552_06220 IPR007627 RNA polymerase sigma-70 region 2 PF552_06220 IPR000943 RNA polymerase sigma-70 PF552_06220 IPR013325 RNA polymerase sigma factor, region 2 PF552_06220 IPR009042 RNA polymerase sigma-70 region 1.2 PF552_06220 IPR014284 RNA polymerase sigma-70 like domain PF552_06235 IPR019844 Cold-shock (CSD) domain PF552_06235 IPR012340 Nucleic acid-binding, OB-fold PF552_06235 IPR011129 Cold shock domain PF552_06235 IPR012156 Cold shock, CspA PF552_06235 IPR002059 Cold-shock protein, DNA-binding PF552_06240 IPR011545 DEAD/DEAH box helicase domain PF552_06240 IPR001650 Helicase, C-terminal PF552_06240 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_06240 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PF552_06240 IPR023554 ATP-dependent RNA helicase RhlB type PF552_06240 IPR014014 RNA helicase, DEAD-box type, Q motif PF552_06240 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_06250 IPR000415 Nitroreductase-like PF552_06250 IPR029479 Nitroreductase PF552_06250 IPR026021 Putative NAD(P)H nitroreductase YdjA-like PF552_06255 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_06255 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PF552_06255 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent PF552_06255 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal PF552_06255 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal PF552_06255 IPR036291 NAD(P)-binding domain superfamily PF552_06275 IPR013785 Aldolase-type TIM barrel PF552_06275 IPR005720 Dihydroorotate dehydrogenase domain PF552_06275 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 PF552_06275 IPR005719 Dihydroorotate dehydrogenase, class 2 PF552_06275 IPR001295 Dihydroorotate dehydrogenase, conserved site PF552_06280 IPR003825 Colicin V production, CvpA PF552_06285 IPR035584 Amidophosphoribosyltransferase, N-terminal PF552_06285 IPR005854 Amidophosphoribosyltransferase PF552_06285 IPR000836 Phosphoribosyltransferase domain PF552_06285 IPR029055 Nucleophile aminohydrolases, N-terminal PF552_06285 IPR017932 Glutamine amidotransferase type 2 domain PF552_06285 IPR029057 Phosphoribosyltransferase-like PF552_06300 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF552_06300 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PF552_06300 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PF552_06300 IPR023756 Glyoxylate/hydroxypyruvate reductase B PF552_06300 IPR036291 NAD(P)-binding domain superfamily PF552_06305 IPR001915 Peptidase M48 PF552_06305 IPR030873 Beta-barrel assembly-enhancing protease PF552_06305 IPR011990 Tetratricopeptide-like helical domain superfamily PF552_06310 IPR042184 YqeY/Aim41, N-terminal domain PF552_06310 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like PF552_06310 IPR019004 Uncharacterised protein YqeY/Aim41 PF552_06310 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 PF552_06315 IPR001911 Ribosomal protein S21 PF552_06315 IPR018278 Ribosomal protein S21, conserved site PF552_06315 IPR038380 Ribosomal protein S21 superfamily PF552_06320 IPR000905 Gcp-like domain PF552_06320 IPR017861 Kae1/TsaD family PF552_06320 IPR017860 Peptidase M22, conserved site PF552_06320 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD PF552_06340 IPR011009 Protein kinase-like domain superfamily PF552_06340 IPR005543 PASTA domain PF552_06340 IPR000719 Protein kinase domain PF552_06340 IPR017441 Protein kinase, ATP binding site PF552_06340 IPR008271 Serine/threonine-protein kinase, active site PF552_06365 IPR036390 Winged helix DNA-binding domain superfamily PF552_06365 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_06365 IPR005119 LysR, substrate-binding PF552_06365 IPR000847 Transcription regulator HTH, LysR PF552_06370 IPR005814 Aminotransferase class-III PF552_06370 IPR015424 Pyridoxal phosphate-dependent transferase PF552_06370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_06370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_06375 IPR010061 Methylmalonate-semialdehyde dehydrogenase PF552_06375 IPR015590 Aldehyde dehydrogenase domain PF552_06375 IPR016161 Aldehyde/histidinol dehydrogenase PF552_06375 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_06375 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_06375 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_06380 IPR011265 GABA permease PF552_06380 IPR004841 Amino acid permease/ SLC12A domain PF552_06380 IPR004840 Amino acid permease, conserved site PF552_06410 IPR036700 Bacterial OB-fold superfamily PF552_06410 IPR005220 Bacterial OB-fold PF552_06410 IPR016052 Bacteriophage 933W, L0136 PF552_06435 IPR029058 Alpha/Beta hydrolase fold PF552_06435 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit PF552_06435 IPR000073 Alpha/beta hydrolase fold-1 PF552_06440 IPR004445 Sodium/glutamate symport carrier protein GltS PF552_06450 IPR011711 GntR, C-terminal PF552_06450 IPR008920 Transcription regulator FadR/GntR, C-terminal PF552_06450 IPR000524 Transcription regulator HTH, GntR PF552_06450 IPR036390 Winged helix DNA-binding domain superfamily PF552_06450 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_06460 IPR020846 Major facilitator superfamily domain PF552_06460 IPR005828 Major facilitator, sugar transporter-like PF552_06460 IPR036259 MFS transporter superfamily PF552_06460 IPR004736 MFS transporter, metabolite:H symporter PF552_06460 IPR015041 Osmosensory transporter coiled coil PF552_06460 IPR036292 Proline/betaine transporter ProP, C-terminal PF552_06460 IPR005829 Sugar transporter, conserved site PF552_06490 IPR007498 Intermembrane transport protein PqiA-like PF552_06490 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type PF552_06495 IPR003399 Mce/MlaD PF552_06505 IPR018187 Asp/Glu racemase, active site 1 PF552_06505 IPR001920 Asp/Glu racemase PF552_06505 IPR033134 Asp/Glu racemase, active site 2 PF552_06505 IPR004380 Aspartate racemase PF552_06505 IPR015942 Asp/Glu/hydantoin racemase PF552_06510 IPR000620 EamA domain PF552_06515 IPR012938 Glucose/Sorbosone dehydrogenase PF552_06515 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase PF552_06515 IPR011042 Six-bladed beta-propeller, TolB-like PF552_06535 IPR023954 C4-dicarboxylate transport protein PF552_06535 IPR036458 Sodium:dicarboxylate symporter superfamily PF552_06535 IPR001991 Sodium:dicarboxylate symporter PF552_06535 IPR018107 Sodium:dicarboxylate symporter, conserved site PF552_06545 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain PF552_06545 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain PF552_06545 IPR017782 Hydroxyacylglutathione hydrolase PF552_06545 IPR001279 Metallo-beta-lactamase PF552_06545 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_06550 IPR035906 MetI-like superfamily PF552_06550 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_06555 IPR026253 Methionine import ATP-binding protein MetN PF552_06555 IPR003439 ABC transporter-like PF552_06555 IPR017871 ABC transporter, conserved site PF552_06555 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal PF552_06555 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain PF552_06555 IPR018449 NIL domain PF552_06555 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_06555 IPR003593 AAA+ ATPase domain PF552_06560 IPR004872 Lipoprotein NlpA family PF552_06565 IPR016185 Pre-ATP-grasp domain superfamily PF552_06565 IPR011054 Rudiment single hybrid motif PF552_06565 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal PF552_06565 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily PF552_06565 IPR020560 Phosphoribosylglycinamide synthetase, C-domain PF552_06565 IPR000115 Phosphoribosylglycinamide synthetase PF552_06565 IPR020559 Phosphoribosylglycinamide synthetase, conserved site PF552_06565 IPR013815 ATP-grasp fold, subdomain 1 PF552_06565 IPR011761 ATP-grasp fold PF552_06565 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PF552_06570 IPR024051 AICAR transformylase, duplicated domain superfamily PF552_06570 IPR016193 Cytidine deaminase-like PF552_06570 IPR011607 Methylglyoxal synthase-like domain PF552_06570 IPR036914 Methylglyoxal synthase-like domain superfamily PF552_06570 IPR002695 Bifunctional purine biosynthesis protein PurH-like PF552_06575 IPR002197 DNA binding HTH domain, Fis-type PF552_06575 IPR005412 DNA-binding protein Fis PF552_06575 IPR009057 Homeobox-like domain superfamily PF552_06585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_06585 IPR004498 Ribosomal protein L11 methyltransferase PF552_06595 IPR020595 MnmG-related, conserved site PF552_06595 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related PF552_06595 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG PF552_06595 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_06595 IPR026904 GidA associated domain 3 PF552_06605 IPR025841 Circularly permuted ATP-grasp type 2 PF552_06605 IPR016450 Uncharacterised conserved protein UCP005522 PF552_06615 IPR013589 Bacterial transglutaminase-like, N-terminal PF552_06615 IPR038765 Papain-like cysteine peptidase superfamily PF552_06615 IPR002931 Transglutaminase-like PF552_06625 IPR029066 PLP-binding barrel PF552_06625 IPR000821 Alanine racemase PF552_06625 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PF552_06625 IPR011079 Alanine racemase, C-terminal PF552_06625 IPR001608 Alanine racemase, N-terminal PF552_06630 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_06630 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PF552_06630 IPR007693 DNA helicase, DnaB-like, N-terminal PF552_06630 IPR007694 DNA helicase, DnaB-like, C-terminal PF552_06630 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily PF552_06630 IPR003593 AAA+ ATPase domain PF552_06630 IPR007692 DNA helicase, DnaB type PF552_06635 IPR036935 Ribosomal protein L9, N-terminal domain superfamily PF552_06635 IPR036791 Ribosomal protein L9, C-terminal domain superfamily PF552_06635 IPR020070 Ribosomal protein L9, N-terminal PF552_06635 IPR020069 Ribosomal protein L9, C-terminal PF552_06635 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PF552_06635 IPR000244 Ribosomal protein L9 PF552_06635 IPR020594 Ribosomal protein L9, bacteria/chloroplast PF552_06640 IPR001648 Ribosomal protein S18 PF552_06640 IPR018275 Ribosomal protein S18, conserved site PF552_06640 IPR036870 Ribosomal protein S18 superfamily PF552_06645 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PF552_06645 IPR035980 Ribosomal protein S6 superfamily PF552_06645 IPR020814 Ribosomal protein S6, plastid/chloroplast PF552_06645 IPR020815 Ribosomal protein S6, conserved site PF552_06645 IPR000529 Ribosomal protein S6 PF552_06650 IPR006369 Protohaem IX farnesyltransferase PF552_06650 IPR000537 UbiA prenyltransferase family PF552_06650 IPR030470 UbiA prenyltransferase conserved site PF552_06655 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes PF552_06655 IPR014210 Cytochrome o ubiquinol oxidase subunit IV PF552_06660 IPR014206 Cytochrome o ubiquinol oxidase, subunit III PF552_06660 IPR033946 Ubiquinol oxidase subunit III domain PF552_06660 IPR035973 Cytochrome c oxidase subunit III-like superfamily PF552_06660 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle PF552_06660 IPR024791 Cytochrome c oxidase subunit III PF552_06660 IPR000298 Cytochrome c oxidase subunit III-like PF552_06665 IPR023616 Cytochrome c oxidase-like, subunit I domain PF552_06665 IPR036927 Cytochrome c oxidase-like, subunit I superfamily PF552_06665 IPR000883 Cytochrome c oxidase subunit I PF552_06665 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site PF552_06665 IPR014207 Cytochrome o ubiquinol oxidase, subunit I PF552_06670 IPR010514 COX aromatic rich motif PF552_06670 IPR002429 Cytochrome c oxidase subunit II-like C-terminal PF552_06670 IPR008972 Cupredoxin PF552_06670 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain PF552_06670 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain PF552_06670 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily PF552_06670 IPR006333 Cytochrome o ubiquinol oxidase subunit II PF552_06680 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding PF552_06680 IPR040442 Pyruvate kinase-like domain superfamily PF552_06680 IPR036637 Phosphohistidine domain superfamily PF552_06680 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PF552_06680 IPR023151 PEP-utilising enzyme, conserved site PF552_06680 IPR000121 PEP-utilising enzyme, C-terminal PF552_06680 IPR018274 PEP-utilising enzyme, active site PF552_06680 IPR006319 Phosphoenolpyruvate synthase PF552_06680 IPR008279 PEP-utilising enzyme, mobile domain PF552_06680 IPR013815 ATP-grasp fold, subdomain 1 PF552_06685 IPR005177 Bifunctional kinase-pyrophosphorylase PF552_06685 IPR026530 Phosphoenolpyruvate synthase regulatory protein PF552_06695 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB PF552_06695 IPR002509 NodB homology domain PF552_06695 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal PF552_06695 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel PF552_06700 IPR001173 Glycosyltransferase 2-like PF552_06700 IPR029044 Nucleotide-diphospho-sugar transferases PF552_06700 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA PF552_06705 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD PF552_06715 IPR011251 Luciferase-like domain PF552_06715 IPR036661 Luciferase-like domain superfamily PF552_06715 IPR019949 Luciferase family oxidoreductase, group 1 PF552_06730 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_06730 IPR005119 LysR, substrate-binding PF552_06730 IPR000847 Transcription regulator HTH, LysR PF552_06730 IPR036390 Winged helix DNA-binding domain superfamily PF552_06740 IPR004373 Peptide chain release factor 1 PF552_06740 IPR000352 Peptide chain release factor class I PF552_06740 IPR005139 Peptide chain release factor PF552_06745 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PF552_06745 IPR004556 Methyltransferase HemK-like PF552_06745 IPR025714 Methyltransferase domain PF552_06745 IPR040758 Release factor glutamine methyltransferase, N-terminal domain PF552_06745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_06745 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific PF552_06750 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_06750 IPR035906 MetI-like superfamily PF552_06755 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PF552_06755 IPR010067 Aliphatic sulfonates-binding protein PF552_06755 IPR015168 SsuA/THI5-like PF552_06760 IPR018060 DNA binding HTH domain, AraC-type PF552_06760 IPR020449 Transcription regulator HTH, AraC- type PF552_06760 IPR018062 HTH domain AraC-type, conserved site PF552_06760 IPR009057 Homeobox-like domain superfamily PF552_06765 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_06765 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_06765 IPR036291 NAD(P)-binding domain superfamily PF552_06770 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_06770 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_06770 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_06770 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_06770 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_06770 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_06770 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_06775 IPR000873 AMP-dependent synthetase/ligase PF552_06775 IPR025110 AMP-binding enzyme, C-terminal domain PF552_06775 IPR020845 AMP-binding, conserved site PF552_06775 IPR042099 AMP-dependent synthetase-like superfamily PF552_06780 IPR012349 FMN-binding split barrel PF552_06780 IPR002563 Flavin reductase like domain PF552_06785 IPR035985 Ubiquitin-activating enzyme PF552_06785 IPR000594 THIF-type NAD/FAD binding fold PF552_06785 IPR012730 Molybdopterin synthase sulfurylase MoeB PF552_06790 IPR004147 UbiB domain PF552_06790 IPR000719 Protein kinase domain PF552_06790 IPR011009 Protein kinase-like domain superfamily PF552_06795 IPR006156 Dihydroneopterin aldolase PF552_06795 IPR006157 Dihydroneopterin aldolase/epimerase domain PF552_06805 IPR023298 P-type ATPase, transmembrane domain superfamily PF552_06805 IPR004623 Potassium-transporting ATPase A chain PF552_06810 IPR006391 P-type ATPase, B chain, subfamily IA PF552_06810 IPR036412 HAD-like superfamily PF552_06810 IPR008250 P-type ATPase, A domain superfamily PF552_06810 IPR001757 P-type ATPase PF552_06810 IPR018303 P-type ATPase, phosphorylation site PF552_06810 IPR023299 P-type ATPase, cytoplasmic domain N PF552_06810 IPR023298 P-type ATPase, transmembrane domain superfamily PF552_06815 IPR003820 Potassium-transporting ATPase C chain PF552_06825 IPR011006 CheY-like superfamily PF552_06825 IPR001867 OmpR/PhoB-type DNA-binding domain PF552_06825 IPR001789 Signal transduction response regulator, receiver domain PF552_06825 IPR039420 Transcriptional regulatory protein WalR-like PF552_06825 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_06830 IPR008146 Glutamine synthetase, catalytic domain PF552_06830 IPR036651 Glutamine synthetase, N-terminal domain superfamily PF552_06830 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PF552_06830 IPR027303 Glutamine synthetase, glycine-rich site PF552_06840 IPR011566 Ubiquinone biosynthesis protein Coq7 PF552_06840 IPR009078 Ferritin-like superfamily PF552_06845 IPR023727 Lysophospholipid transporter LplT PF552_06845 IPR011701 Major facilitator superfamily PF552_06845 IPR036259 MFS transporter superfamily PF552_06850 IPR035243 TamA, POTRA domain 1 PF552_06850 IPR000184 Bacterial surface antigen (D15) PF552_06850 IPR010827 POTRA domain, BamA/TamA-like PF552_06850 IPR039910 Surface antigen D15-like PF552_06850 IPR034746 POTRA domain PF552_06865 IPR015933 Aconitase B, HEAT-like domain PF552_06865 IPR004406 Aconitase B PF552_06865 IPR036008 Aconitase, iron-sulfur domain PF552_06865 IPR018136 Aconitase family, 4Fe-4S cluster binding site PF552_06865 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PF552_06865 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain PF552_06865 IPR036288 Aconitase B, HEAT-like domain superfamily PF552_06865 IPR015932 Aconitase, domain 2 PF552_06865 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PF552_06865 IPR015929 Aconitase B, swivel PF552_06875 IPR014710 RmlC-like jelly roll fold PF552_06875 IPR028325 Voltage-gated potassium channel PF552_06875 IPR005821 Ion transport domain PF552_06875 IPR018490 Cyclic nucleotide-binding-like PF552_06875 IPR018488 Cyclic nucleotide-binding, conserved site PF552_06875 IPR000595 Cyclic nucleotide-binding domain PF552_06880 IPR011701 Major facilitator superfamily PF552_06880 IPR020846 Major facilitator superfamily domain PF552_06880 IPR036259 MFS transporter superfamily PF552_06895 IPR005119 LysR, substrate-binding PF552_06895 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain PF552_06895 IPR000847 Transcription regulator HTH, LysR PF552_06895 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_06895 IPR036390 Winged helix DNA-binding domain superfamily PF552_06900 IPR007382 Uncharacterised protein family UPF0756, transmembrame PF552_06910 IPR036986 RNA-binding S4 domain superfamily PF552_06910 IPR002942 RNA-binding S4 domain PF552_06910 IPR020103 Pseudouridine synthase, catalytic domain superfamily PF552_06910 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PF552_06910 IPR006145 Pseudouridine synthase, RsuA/RluA PF552_06910 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PF552_06910 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PF552_06925 IPR002942 RNA-binding S4 domain PF552_06925 IPR036986 RNA-binding S4 domain superfamily PF552_06925 IPR006145 Pseudouridine synthase, RsuA/RluA PF552_06925 IPR006225 Pseudouridine synthase, RluC/RluD PF552_06925 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PF552_06925 IPR020103 Pseudouridine synthase, catalytic domain superfamily PF552_06930 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_06930 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE PF552_06935 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_06935 IPR037198 MutL, C-terminal domain superfamily PF552_06935 IPR042121 MutL, C-terminal domain, regulatory subdomain PF552_06935 IPR042120 MutL, C-terminal domain, dimerisation subdomain PF552_06935 IPR014790 MutL, C-terminal, dimerisation PF552_06935 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms PF552_06935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_06935 IPR013507 DNA mismatch repair protein, S5 domain 2-like PF552_06935 IPR002099 DNA mismatch repair protein family, N-terminal PF552_06935 IPR020667 DNA mismatch repair protein, MutL PF552_06935 IPR014762 DNA mismatch repair, conserved site PF552_06935 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PF552_06940 IPR018022 IPP transferase PF552_06940 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_06940 IPR039657 Dimethylallyltransferase PF552_06945 IPR005001 RNA-binding protein Hfq PF552_06945 IPR010920 LSM domain superfamily PF552_06955 IPR033878 Nitroreductase NfsB-like PF552_06955 IPR029479 Nitroreductase PF552_06955 IPR000415 Nitroreductase-like PF552_06965 IPR029052 Metallo-dependent phosphatase-like PF552_06965 IPR010138 UDP-2,3-diacylglucosamine hydrolase PF552_06965 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PF552_06970 IPR029000 Cyclophilin-like domain superfamily PF552_06970 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase PF552_06970 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site PF552_06970 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain PF552_06975 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily PF552_06975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_06975 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily PF552_06975 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal PF552_06975 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain PF552_06975 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PF552_06975 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PF552_06975 IPR022861 Glutamine-tRNA ligase, bacterial PF552_06975 IPR004514 Glutamine-tRNA synthetase PF552_06975 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PF552_06980 IPR022310 NAD/GMP synthase PF552_06980 IPR004739 GMP synthase, glutamine amidotransferase PF552_06980 IPR025777 GMP synthetase ATP pyrophosphatase domain PF552_06980 IPR022955 GMP synthase PF552_06980 IPR001674 GMP synthase, C-terminal PF552_06980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_06980 IPR029062 Class I glutamine amidotransferase-like PF552_06980 IPR017926 Glutamine amidotransferase PF552_06985 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal PF552_06985 IPR009246 Ethanolamine ammonia-lyase light chain PF552_06985 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal PF552_06990 IPR010628 Ethanolamine ammonia lyase large subunit PF552_06990 IPR013785 Aldolase-type TIM barrel PF552_06995 IPR002293 Amino acid/polyamine transporter I PF552_07000 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_07000 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_07000 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_07000 IPR016161 Aldehyde/histidinol dehydrogenase PF552_07000 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_07000 IPR015590 Aldehyde dehydrogenase domain PF552_07005 IPR029016 GAF-like domain superfamily PF552_07015 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA PF552_07015 IPR018211 Alcohol dehydrogenase, iron-type, conserved site PF552_07015 IPR039697 Iron-type alcohol dehydrogenase-like PF552_07020 IPR003593 AAA+ ATPase domain PF552_07020 IPR029491 Helicase Helix-turn-helix domain PF552_07020 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_07020 IPR010285 DNA helicase Pif1-like PF552_07030 IPR010499 Bacterial transcription activator, effector binding PF552_07030 IPR029442 GyrI-like small molecule binding domain PF552_07030 IPR011256 Regulatory factor, effector binding domain superfamily PF552_07035 IPR000417 Hydroxyethylthiazole kinase PF552_07035 IPR029056 Ribokinase-like PF552_07050 IPR027268 Peptidase M4/M1, CTD superfamily PF552_07050 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold PF552_07050 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily PF552_07050 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase PF552_07050 IPR012779 Peptidase M1, alanyl aminopeptidase PF552_07050 IPR014782 Peptidase M1, membrane alanine aminopeptidase PF552_07050 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily PF552_07050 IPR042097 Aminopeptidase N-like , N-terminal PF552_07050 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PF552_07070 IPR036263 Chorismate mutase type II superfamily PF552_07070 IPR008240 Chorismate mutase, periplasmic PF552_07070 IPR002701 Chorismate mutase II, prokaryotic-type PF552_07075 IPR036390 Winged helix DNA-binding domain superfamily PF552_07075 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PF552_07075 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_07075 IPR019888 Transcription regulator AsnC-type PF552_07075 IPR011008 Dimeric alpha-beta barrel PF552_07075 IPR000485 AsnC-type HTH domain PF552_07075 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PF552_07075 IPR011991 ArsR-like helix-turn-helix domain PF552_07090 IPR009057 Homeobox-like domain superfamily PF552_07090 IPR001647 DNA-binding HTH domain, TetR-type PF552_07095 IPR039426 Vitamin B12 transporter BtuB-like PF552_07095 IPR012910 TonB-dependent receptor, plug domain PF552_07095 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_07095 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_07095 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_07095 IPR010105 TonB-dependent siderophore receptor PF552_07100 IPR030192 Miniconductance mechanosensitive channel YbdG PF552_07100 IPR011066 Mechanosensitive ion channel MscS, C-terminal PF552_07100 IPR006685 Mechanosensitive ion channel MscS PF552_07100 IPR010920 LSM domain superfamily PF552_07130 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_07130 IPR039423 TonB-dependent receptor-like PF552_07130 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_07130 IPR010916 TonB box, conserved site PF552_07130 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_07130 IPR010917 TonB-dependent receptor, conserved site PF552_07130 IPR012910 TonB-dependent receptor, plug domain PF552_07130 IPR010105 TonB-dependent siderophore receptor PF552_07150 IPR032781 ABC-transporter extension domain PF552_07150 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_07150 IPR017871 ABC transporter, conserved site PF552_07150 IPR003593 AAA+ ATPase domain PF552_07150 IPR003439 ABC transporter-like PF552_07155 IPR006016 UspA PF552_07155 IPR006015 Universal stress protein A family PF552_07155 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_07180 IPR006068 Cation-transporting P-type ATPase, C-terminal PF552_07180 IPR023299 P-type ATPase, cytoplasmic domain N PF552_07180 IPR018303 P-type ATPase, phosphorylation site PF552_07180 IPR023298 P-type ATPase, transmembrane domain superfamily PF552_07180 IPR008250 P-type ATPase, A domain superfamily PF552_07180 IPR036412 HAD-like superfamily PF552_07180 IPR023214 HAD superfamily PF552_07180 IPR006415 P-type ATPase, subfamily IIIB PF552_07180 IPR001757 P-type ATPase PF552_07180 IPR004014 Cation-transporting P-type ATPase, N-terminal PF552_07185 IPR003416 MgtC/SapB/SrpB/YhiD family PF552_07190 IPR004711 Benzoate transporter PF552_07195 IPR011991 ArsR-like helix-turn-helix domain PF552_07195 IPR000485 AsnC-type HTH domain PF552_07195 IPR011008 Dimeric alpha-beta barrel PF552_07195 IPR019888 Transcription regulator AsnC-type PF552_07195 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_07195 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PF552_07195 IPR036390 Winged helix DNA-binding domain superfamily PF552_07195 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PF552_07200 IPR004778 Homoserine/Threonine efflux protein PF552_07200 IPR001123 Amino acid exporter protein, LeuE-type PF552_07205 IPR013785 Aldolase-type TIM barrel PF552_07205 IPR001585 Transaldolase/Fructose-6-phosphate aldolase PF552_07205 IPR004730 Transaldolase type 1 PF552_07205 IPR018225 Transaldolase, active site PF552_07210 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain PF552_07210 IPR036390 Winged helix DNA-binding domain superfamily PF552_07210 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_07210 IPR000847 Transcription regulator HTH, LysR PF552_07210 IPR005119 LysR, substrate-binding PF552_07220 IPR002155 Thiolase PF552_07220 IPR020616 Thiolase, N-terminal PF552_07220 IPR020617 Thiolase, C-terminal PF552_07220 IPR020610 Thiolase, active site PF552_07220 IPR012806 Acetyl-CoA C-acyltransferase FadI PF552_07220 IPR016039 Thiolase-like PF552_07220 IPR020613 Thiolase, conserved site PF552_07225 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_07225 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_07225 IPR036291 NAD(P)-binding domain superfamily PF552_07225 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PF552_07230 IPR029069 HotDog domain superfamily PF552_07230 IPR003965 Fatty acid synthase PF552_07230 IPR002539 MaoC-like dehydratase domain PF552_07235 IPR001466 Beta-lactamase-related PF552_07235 IPR012338 Beta-lactamase/transpeptidase-like PF552_07245 IPR011701 Major facilitator superfamily PF552_07245 IPR020846 Major facilitator superfamily domain PF552_07245 IPR036259 MFS transporter superfamily PF552_07250 IPR012763 DNA polymerase III, subunit gamma/ tau PF552_07250 IPR003593 AAA+ ATPase domain PF552_07250 IPR001270 ClpA/B family PF552_07250 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PF552_07250 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV PF552_07250 IPR022754 DNA polymerase III, gamma subunit, domain III PF552_07250 IPR021029 DNA polymerase III, tau subunit, domain V PF552_07250 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_07250 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily PF552_07255 IPR006311 Twin-arginine translocation pathway, signal sequence PF552_07255 IPR008475 Bacterial phospholipase C, C-terminal domain PF552_07255 IPR007312 Phosphoesterase PF552_07255 IPR017767 Bacterial phospholipase C, phosphocholine-specific PF552_07255 IPR017850 Alkaline-phosphatase-like, core domain superfamily PF552_07260 IPR029069 HotDog domain superfamily PF552_07260 IPR006683 Thioesterase domain PF552_07265 IPR039697 Iron-type alcohol dehydrogenase-like PF552_07265 IPR018211 Alcohol dehydrogenase, iron-type, conserved site PF552_07265 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA PF552_07275 IPR023485 Phosphotyrosine protein phosphatase I PF552_07275 IPR036196 Phosphotyrosine protein phosphatase I superfamily PF552_07275 IPR017867 Protein-tyrosine phosphatase, low molecular weight PF552_07280 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily PF552_07280 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase PF552_07280 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal PF552_07280 IPR016169 FAD-binding, type PCMH, subdomain 2 PF552_07280 IPR006094 FAD linked oxidase, N-terminal PF552_07280 IPR036318 FAD-binding, type PCMH-like superfamily PF552_07280 IPR016166 FAD-binding domain, PCMH-type PF552_07280 IPR016167 FAD-binding, type PCMH, subdomain 1 PF552_07295 IPR013785 Aldolase-type TIM barrel PF552_07295 IPR024188 Glutamate synthase large subunit-like protein PF552_07295 IPR002932 Glutamate synthase domain PF552_07295 IPR027283 Glutamate synthase large subunit-like protein, bacteria PF552_07315 IPR026032 Probable 3-phenylpropionic acid transporter PF552_07315 IPR024989 Major facilitator superfamily associated domain PF552_07315 IPR036259 MFS transporter superfamily PF552_07325 IPR005482 Biotin carboxylase, C-terminal PF552_07325 IPR016185 Pre-ATP-grasp domain superfamily PF552_07325 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PF552_07325 IPR011764 Biotin carboxylation domain PF552_07325 IPR011054 Rudiment single hybrid motif PF552_07325 IPR013815 ATP-grasp fold, subdomain 1 PF552_07325 IPR011761 ATP-grasp fold PF552_07325 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase PF552_07325 IPR005481 Biotin carboxylase-like, N-terminal domain PF552_07330 IPR001249 Acetyl-CoA biotin carboxyl carrier PF552_07330 IPR001882 Biotin-binding site PF552_07330 IPR000089 Biotin/lipoyl attachment PF552_07330 IPR011053 Single hybrid motif PF552_07335 IPR018509 Dehydroquinase, class II, conserved site PF552_07335 IPR036441 Dehydroquinase, class II superfamily PF552_07335 IPR001874 Dehydroquinase, class II PF552_07340 IPR036775 DNA polymerase, Y-family, little finger domain superfamily PF552_07340 IPR017961 DNA polymerase, Y-family, little finger domain PF552_07340 IPR025188 Domain of unknown function DUF4113 PF552_07340 IPR001126 UmuC domain PF552_07350 IPR003593 AAA+ ATPase domain PF552_07350 IPR003439 ABC transporter-like PF552_07350 IPR017871 ABC transporter, conserved site PF552_07350 IPR005890 Nitrate transport ATP-binding subunit C/D PF552_07350 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_07355 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_07355 IPR039420 Transcriptional regulatory protein WalR-like PF552_07355 IPR001789 Signal transduction response regulator, receiver domain PF552_07355 IPR011006 CheY-like superfamily PF552_07355 IPR001867 OmpR/PhoB-type DNA-binding domain PF552_07355 IPR016032 Signal transduction response regulator, C-terminal effector PF552_07365 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PF552_07365 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type PF552_07365 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site PF552_07365 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain PF552_07365 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB PF552_07365 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily PF552_07365 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal PF552_07365 IPR023753 FAD/NAD(P)-binding domain PF552_07365 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_07365 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily PF552_07365 IPR007419 BFD-like [2Fe-2S]-binding domain PF552_07365 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain PF552_07370 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal PF552_07370 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site PF552_07370 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain PF552_07370 IPR017121 Nitrite reductase [NAD(P)H], large subunit PF552_07370 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB PF552_07370 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily PF552_07370 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PF552_07370 IPR023753 FAD/NAD(P)-binding domain PF552_07370 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_07370 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily PF552_07370 IPR007419 BFD-like [2Fe-2S]-binding domain PF552_07370 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain PF552_07375 IPR006657 Molybdopterin dinucleotide-binding domain PF552_07375 IPR007419 BFD-like [2Fe-2S]-binding domain PF552_07375 IPR006656 Molybdopterin oxidoreductase PF552_07375 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site PF552_07375 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PF552_07375 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily PF552_07375 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain PF552_07375 IPR009010 Aspartate decarboxylase-like domain superfamily PF552_07380 IPR025877 MobA-like NTP transferase PF552_07380 IPR013482 Molybdenum cofactor guanylyltransferase PF552_07380 IPR029044 Nucleotide-diphospho-sugar transferases PF552_07385 IPR009010 Aspartate decarboxylase-like domain superfamily PF552_07385 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain PF552_07385 IPR006657 Molybdopterin dinucleotide-binding domain PF552_07385 IPR006656 Molybdopterin oxidoreductase PF552_07385 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PF552_07385 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site PF552_07390 IPR013785 Aldolase-type TIM barrel PF552_07390 IPR013483 Molybdenum cofactor biosynthesis protein A PF552_07390 IPR006638 Elp3/MiaB/NifB PF552_07390 IPR010505 Molybdenum cofactor synthesis C-terminal PF552_07390 IPR007197 Radical SAM PF552_07390 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site PF552_07400 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily PF552_07400 IPR003448 Molybdopterin biosynthesis MoaE PF552_07405 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain PF552_07405 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily PF552_07405 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA PF552_07405 IPR036425 MoaB/Mog-like domain superfamily PF552_07405 IPR023045 Molybdenum cofactor biosynthesis C PF552_07405 IPR001453 MoaB/Mog domain PF552_07410 IPR036688 MoeA, C-terminal, domain IV superfamily PF552_07410 IPR036425 MoaB/Mog-like domain superfamily PF552_07410 IPR005110 MoeA, N-terminal and linker domain PF552_07410 IPR036135 MoeA, N-terminal and linker domain superfamily PF552_07410 IPR001453 MoaB/Mog domain PF552_07410 IPR038987 Molybdopterin biosynthesis protein MoeA-like PF552_07410 IPR005111 MoeA, C-terminal, domain IV PF552_07415 IPR011991 ArsR-like helix-turn-helix domain PF552_07415 IPR002577 Helix-turn-helix, HxlR type PF552_07415 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_07415 IPR036390 Winged helix DNA-binding domain superfamily PF552_07420 IPR004839 Aminotransferase, class I/classII PF552_07420 IPR015424 Pyridoxal phosphate-dependent transferase PF552_07420 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_07420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_07420 IPR000524 Transcription regulator HTH, GntR PF552_07420 IPR036390 Winged helix DNA-binding domain superfamily PF552_07420 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_07425 IPR000620 EamA domain PF552_07445 IPR017463 Sulphur relay, TusD/DsrE PF552_07445 IPR003787 Sulphur relay, DsrE/F-like protein PF552_07445 IPR027396 DsrEFH-like PF552_07450 IPR036291 NAD(P)-binding domain superfamily PF552_07450 IPR016040 NAD(P)-binding domain PF552_07450 IPR005886 UDP-glucose 4-epimerase PF552_07455 IPR018951 Fumarase C, C-terminal PF552_07455 IPR020557 Fumarate lyase, conserved site PF552_07455 IPR000362 Fumarate lyase family PF552_07455 IPR005677 Fumarate hydratase, class II PF552_07455 IPR008948 L-Aspartase-like PF552_07455 IPR024083 Fumarase/histidase, N-terminal PF552_07455 IPR022761 Fumarate lyase, N-terminal PF552_07475 IPR023080 D-amino acid dehydrogenase DadA PF552_07475 IPR006076 FAD dependent oxidoreductase PF552_07475 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_07485 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily PF552_07485 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site PF552_07485 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PF552_07495 IPR024904 Ornithine carbamoyltransferase PF552_07495 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain PF552_07495 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily PF552_07495 IPR006130 Aspartate/ornithine carbamoyltransferase PF552_07495 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding PF552_07495 IPR002292 Ornithine/putrescine carbamoyltransferase PF552_07500 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PF552_07500 IPR009057 Homeobox-like domain superfamily PF552_07500 IPR001647 DNA-binding HTH domain, TetR-type PF552_07505 IPR011006 CheY-like superfamily PF552_07505 IPR010114 DNA-binding transcriptional regulator NtrC PF552_07505 IPR025944 Sigma-54 interaction domain, conserved site PF552_07505 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PF552_07505 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PF552_07505 IPR002078 RNA polymerase sigma factor 54 interaction domain PF552_07505 IPR001789 Signal transduction response regulator, receiver domain PF552_07505 IPR002197 DNA binding HTH domain, Fis-type PF552_07505 IPR003593 AAA+ ATPase domain PF552_07505 IPR009057 Homeobox-like domain superfamily PF552_07505 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_07510 IPR005467 Histidine kinase domain PF552_07510 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_07510 IPR013767 PAS fold PF552_07510 IPR035965 PAS domain superfamily PF552_07510 IPR003594 Histidine kinase/HSP90-like ATPase PF552_07510 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_07510 IPR000014 PAS domain PF552_07510 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_07510 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_07515 IPR002792 TRAM domain PF552_07515 IPR023404 Radical SAM, alpha/beta horseshoe PF552_07515 IPR007197 Radical SAM PF552_07515 IPR005839 Methylthiotransferase PF552_07515 IPR006638 Elp3/MiaB/NifB PF552_07515 IPR038135 Methylthiotransferase, N-terminal domain superfamily PF552_07515 IPR013848 Methylthiotransferase, N-terminal PF552_07515 IPR020612 Methylthiotransferase, conserved site PF552_07515 IPR041582 RimO, TRAM domain PF552_07515 IPR005840 Ribosomal protein S12 methylthiotransferase RimO PF552_07520 IPR036393 Acetylglutamate kinase-like superfamily PF552_07520 IPR001048 Aspartate/glutamate/uridylate kinase PF552_07520 IPR015963 Uridylate kinase, bacteria PF552_07520 IPR011817 Uridylate kinase PF552_07525 IPR002661 Ribosome recycling factor PF552_07525 IPR023584 Ribosome recycling factor domain PF552_07525 IPR036191 RRF superfamily PF552_07530 IPR001441 Decaprenyl diphosphate synthase-like PF552_07530 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site PF552_07530 IPR036424 Decaprenyl diphosphate synthase-like superfamily PF552_07535 IPR000374 Phosphatidate cytidylyltransferase PF552_07540 IPR036291 NAD(P)-binding domain superfamily PF552_07540 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase PF552_07540 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal PF552_07540 IPR036169 DXP reductoisomerase, C-terminal domain superfamily PF552_07540 IPR026877 DXP reductoisomerase C-terminal domain PF552_07540 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal PF552_07545 IPR001478 PDZ domain PF552_07545 IPR041489 PDZ domain 6 PF552_07545 IPR036034 PDZ superfamily PF552_07545 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase PF552_07545 IPR008915 Peptidase M50 PF552_07550 IPR034746 POTRA domain PF552_07550 IPR023707 Outer membrane protein assembly factor BamA PF552_07550 IPR039910 Surface antigen D15-like PF552_07550 IPR010827 POTRA domain, BamA/TamA-like PF552_07550 IPR000184 Bacterial surface antigen (D15) PF552_07560 IPR011004 Trimeric LpxA-like superfamily PF552_07560 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD PF552_07560 IPR001451 Hexapeptide repeat PF552_07560 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region PF552_07565 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ PF552_07565 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ PF552_07565 IPR029069 HotDog domain superfamily PF552_07570 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal PF552_07570 IPR011004 Trimeric LpxA-like superfamily PF552_07570 IPR018357 Hexapeptide transferase, conserved site PF552_07570 IPR001451 Hexapeptide repeat PF552_07570 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily PF552_07570 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase PF552_07585 IPR003783 Regulatory protein RecX PF552_07585 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_07590 IPR013765 DNA recombination and repair protein RecA PF552_07590 IPR020584 DNA recombination/repair protein RecA, conserved site PF552_07590 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface PF552_07590 IPR003593 AAA+ ATPase domain PF552_07590 IPR023400 DNA recombination and repair protein RecA, C-terminal PF552_07590 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain PF552_07590 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_07595 IPR036986 RNA-binding S4 domain superfamily PF552_07595 IPR025708 Heat shock protein 15 PF552_07595 IPR002942 RNA-binding S4 domain PF552_07600 IPR036412 HAD-like superfamily PF552_07600 IPR006439 HAD hydrolase, subfamily IA PF552_07600 IPR023214 HAD superfamily PF552_07600 IPR041492 Haloacid dehalogenase-like hydrolase PF552_07625 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_07625 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PF552_07625 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PF552_07625 IPR036390 Winged helix DNA-binding domain superfamily PF552_07625 IPR011008 Dimeric alpha-beta barrel PF552_07625 IPR000485 AsnC-type HTH domain PF552_07625 IPR011991 ArsR-like helix-turn-helix domain PF552_07625 IPR019888 Transcription regulator AsnC-type PF552_07630 IPR000192 Aminotransferase class V domain PF552_07630 IPR015424 Pyridoxal phosphate-dependent transferase PF552_07630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_07630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_07630 IPR010111 Kynureninase PF552_07635 IPR004840 Amino acid permease, conserved site PF552_07635 IPR004841 Amino acid permease/ SLC12A domain PF552_07650 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 PF552_07650 IPR036852 Peptidase S8/S53 domain superfamily PF552_07650 IPR015500 Peptidase S8, subtilisin-related PF552_07650 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily PF552_07650 IPR023828 Peptidase S8, subtilisin, Ser-active site PF552_07650 IPR034193 Proteinase K-like catalytic domain PF552_07650 IPR023827 Peptidase S8, subtilisin, Asp-active site PF552_07650 IPR000209 Peptidase S8/S53 domain PF552_07650 IPR022398 Peptidase S8, subtilisin, His-active site PF552_07655 IPR018045 Sulphate anion transporter, conserved site PF552_07655 IPR011547 SLC26A/SulP transporter domain PF552_07655 IPR001902 SLC26A/SulP transporter PF552_07655 IPR002645 STAS domain PF552_07655 IPR036513 STAS domain superfamily PF552_07660 IPR003738 SOS response associated peptidase (SRAP) PF552_07660 IPR036590 SOS response associated peptidase-like PF552_07665 IPR011042 Six-bladed beta-propeller, TolB-like PF552_07665 IPR012938 Glucose/Sorbosone dehydrogenase PF552_07665 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase PF552_07665 IPR019893 PQQ-dependent dehydrogenase, s-GDH family PF552_07675 IPR000160 GGDEF domain PF552_07675 IPR005330 MHYT domain PF552_07675 IPR035965 PAS domain superfamily PF552_07675 IPR035919 EAL domain superfamily PF552_07675 IPR029787 Nucleotide cyclase PF552_07675 IPR001633 EAL domain PF552_07695 IPR003353 Phosphotransferase system, fructose-specific IIB subunit PF552_07695 IPR036095 PTS system IIB component-like superfamily PF552_07695 IPR013011 Phosphotransferase system, EIIB component, type 2 PF552_07695 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PF552_07695 IPR003352 Phosphotransferase system, EIIC PF552_07695 IPR013014 Phosphotransferase system, EIIC component, type 2 PF552_07695 IPR006327 Phosphotransferase system, fructose IIC component PF552_07700 IPR017583 Tagatose/fructose phosphokinase PF552_07700 IPR011611 Carbohydrate kinase PfkB PF552_07700 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PF552_07700 IPR029056 Ribokinase-like PF552_07700 IPR022463 Fructose 1-phosphate kinase PF552_07705 IPR023151 PEP-utilising enzyme, conserved site PF552_07705 IPR016152 Phosphotransferase/anion transporter PF552_07705 IPR006318 Phosphotransferase system, enzyme I-like PF552_07705 IPR008731 Phosphotransferase system, enzyme I N-terminal PF552_07705 IPR036637 Phosphohistidine domain superfamily PF552_07705 IPR000121 PEP-utilising enzyme, C-terminal PF552_07705 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PF552_07705 IPR008279 PEP-utilising enzyme, mobile domain PF552_07705 IPR035895 HPr-like superfamily PF552_07705 IPR000032 Phosphocarrier protein HPr-like PF552_07705 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PF552_07705 IPR002178 PTS EIIA type-2 domain PF552_07705 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PF552_07705 IPR040442 Pyruvate kinase-like domain superfamily PF552_07705 IPR018274 PEP-utilising enzyme, active site PF552_07705 IPR036618 PtsI, HPr-binding domain superfamily PF552_07730 IPR004685 Branched-chain amino acid transport system II carrier protein PF552_07735 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 PF552_07735 IPR001714 Peptidase M24, methionine aminopeptidase PF552_07735 IPR000994 Peptidase M24 PF552_07735 IPR036005 Creatinase/aminopeptidase-like PF552_07740 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_07740 IPR036390 Winged helix DNA-binding domain superfamily PF552_07740 IPR005119 LysR, substrate-binding PF552_07740 IPR000847 Transcription regulator HTH, LysR PF552_07750 IPR002109 Glutaredoxin PF552_07750 IPR033658 Glutaredoxin, PICOT-like PF552_07750 IPR036249 Thioredoxin-like superfamily PF552_07750 IPR004480 Monothiol glutaredoxin-related PF552_07750 IPR014434 Monothiol glutaredoxin PF552_07755 IPR015424 Pyridoxal phosphate-dependent transferase PF552_07755 IPR005814 Aminotransferase class-III PF552_07755 IPR004636 Acetylornithine/Succinylornithine transaminase family PF552_07755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_07755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_07760 IPR015875 IMP dehydrogenase / GMP reductase, conserved site PF552_07760 IPR001093 IMP dehydrogenase/GMP reductase PF552_07760 IPR005990 Inosine-5'-monophosphate dehydrogenase PF552_07760 IPR000644 CBS domain PF552_07760 IPR013785 Aldolase-type TIM barrel PF552_07785 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_07785 IPR013822 Signal recognition particle SRP54, helical bundle PF552_07785 IPR003593 AAA+ ATPase domain PF552_07785 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PF552_07785 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily PF552_07785 IPR004390 Signal-recognition particle receptor FtsY PF552_07785 IPR036225 SRP/SRP receptor, N-terminal PF552_07795 IPR018635 Uncharacterised protein family UPF0319 PF552_07805 IPR011724 Cyd operon protein YbgT PF552_07805 IPR012994 Membrane bound YbgT-like PF552_07810 IPR003317 Cytochrome ubiquinol oxidase subunit 2 PF552_07815 IPR002585 Cytochrome ubiquinol oxidase subunit 1 PF552_07825 IPR010840 Protein of unknown function DUF1449 PF552_07835 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PF552_07835 IPR011611 Carbohydrate kinase PfkB PF552_07835 IPR029056 Ribokinase-like PF552_07840 IPR010105 TonB-dependent siderophore receptor PF552_07840 IPR010917 TonB-dependent receptor, conserved site PF552_07840 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_07840 IPR012910 TonB-dependent receptor, plug domain PF552_07840 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_07840 IPR039423 TonB-dependent receptor-like PF552_07840 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_07845 IPR013578 Peptidase M16C associated PF552_07845 IPR007863 Peptidase M16, C-terminal PF552_07845 IPR011765 Peptidase M16, N-terminal PF552_07845 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like PF552_07850 IPR036541 Phospholipase A1 superfamily PF552_07850 IPR003187 Phospholipase A1 PF552_07855 IPR003445 Cation transporter PF552_07855 IPR004772 TrkH potassium transport family PF552_07860 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily PF552_07860 IPR006037 Regulator of K+ conductance, C-terminal PF552_07860 IPR036291 NAD(P)-binding domain superfamily PF552_07860 IPR003148 Regulator of K+ conductance, N-terminal PF552_07865 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PF552_07865 IPR005787 Threonine dehydratase, biosynthetic PF552_07865 IPR038110 Threonine dehydratase, ACT-like domain superfamily PF552_07865 IPR001721 Threonine dehydratase, ACT-like domain PF552_07865 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PF552_07865 IPR001926 Pyridoxal-phosphate dependent enzyme PF552_07870 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup PF552_07870 IPR037171 NagB/RpiA transferase-like PF552_07870 IPR004788 Ribose 5-phosphate isomerase, type A PF552_07885 IPR036291 NAD(P)-binding domain superfamily PF552_07885 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 PF552_07885 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site PF552_07885 IPR000534 Semialdehyde dehydrogenase, NAD-binding PF552_07885 IPR012280 Semialdehyde dehydrogenase, dimerisation domain PF552_07895 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PF552_07895 IPR003769 Adaptor protein ClpS, core PF552_07895 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PF552_07900 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_07900 IPR041546 ClpA/ClpB, AAA lid domain PF552_07900 IPR028299 ClpA/B, conserved site 2 PF552_07900 IPR018368 ClpA/B, conserved site 1 PF552_07900 IPR001270 ClpA/B family PF552_07900 IPR004176 Clp, N-terminal PF552_07900 IPR036628 Clp, N-terminal domain superfamily PF552_07900 IPR019489 Clp ATPase, C-terminal PF552_07900 IPR003959 ATPase, AAA-type, core PF552_07900 IPR003593 AAA+ ATPase domain PF552_07900 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA PF552_07905 IPR003844 Uncharacterised protein family UPF0060 PF552_07910 IPR013785 Aldolase-type TIM barrel PF552_07910 IPR006218 DAHP synthetase I/KDSA PF552_07910 IPR006219 DHAP synthase, class 1 PF552_07925 IPR013785 Aldolase-type TIM barrel PF552_07925 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_07925 IPR023753 FAD/NAD(P)-binding domain PF552_07925 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PF552_07955 IPR004468 CTP synthase PF552_07955 IPR017926 Glutamine amidotransferase PF552_07955 IPR029062 Class I glutamine amidotransferase-like PF552_07955 IPR033828 CTP synthase GATase domain PF552_07955 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_07955 IPR017456 CTP synthase, N-terminal PF552_07960 IPR013785 Aldolase-type TIM barrel PF552_07960 IPR006218 DAHP synthetase I/KDSA PF552_07960 IPR006269 3-deoxy-8-phosphooctulonate synthase PF552_07965 IPR000941 Enolase PF552_07965 IPR036849 Enolase-like, C-terminal domain superfamily PF552_07965 IPR029017 Enolase-like, N-terminal PF552_07965 IPR020811 Enolase, N-terminal PF552_07965 IPR020810 Enolase, C-terminal TIM barrel domain PF552_07965 IPR020809 Enolase, conserved site PF552_07970 IPR007353 Protein of unknown function DUF421 PF552_07970 IPR023090 UPF0702, alpha/beta domain superfamily PF552_07975 IPR023081 Cell division protein FtsB PF552_07975 IPR007060 Septum formation initiator FtsL/DivIC PF552_07980 IPR029044 Nucleotide-diphospho-sugar transferases PF552_07980 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PF552_07980 IPR034683 Cytidylyltransferase IspD/TarI PF552_07980 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site PF552_07985 IPR012792 3-oxoacid CoA-transferase, subunit A PF552_07985 IPR004163 Coenzyme A transferase binding site PF552_07985 IPR037171 NagB/RpiA transferase-like PF552_07985 IPR004165 Coenzyme A transferase family I PF552_07990 IPR004164 Coenzyme A transferase active site PF552_07990 IPR037171 NagB/RpiA transferase-like PF552_07990 IPR004165 Coenzyme A transferase family I PF552_07990 IPR012791 3-oxoacid CoA-transferase, subunit B PF552_07995 IPR020610 Thiolase, active site PF552_07995 IPR020617 Thiolase, C-terminal PF552_07995 IPR020613 Thiolase, conserved site PF552_07995 IPR020616 Thiolase, N-terminal PF552_07995 IPR002155 Thiolase PF552_07995 IPR016039 Thiolase-like PF552_07995 IPR020615 Thiolase, acyl-enzyme intermediate active site PF552_07995 IPR012793 Beta-ketoadipyl CoA thiolase PF552_08000 IPR019468 Adenylosuccinate lyase C-terminal PF552_08000 IPR024083 Fumarase/histidase, N-terminal PF552_08000 IPR020557 Fumarate lyase, conserved site PF552_08000 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase PF552_08000 IPR008948 L-Aspartase-like PF552_08000 IPR022761 Fumarate lyase, N-terminal PF552_08000 IPR000362 Fumarate lyase family PF552_08005 IPR000073 Alpha/beta hydrolase fold-1 PF552_08005 IPR026968 3-oxoadipate enol-lactonase 1/2 PF552_08005 IPR029058 Alpha/Beta hydrolase fold PF552_08010 IPR005829 Sugar transporter, conserved site PF552_08010 IPR036259 MFS transporter superfamily PF552_08010 IPR020846 Major facilitator superfamily domain PF552_08010 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family PF552_08010 IPR011701 Major facilitator superfamily PF552_08015 IPR003779 Carboxymuconolactone decarboxylase-like PF552_08015 IPR012788 4-carboxymuconolactone decarboxylase PF552_08015 IPR029032 AhpD-like PF552_08020 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal PF552_08020 IPR015889 Intradiol ring-cleavage dioxygenase, core PF552_08020 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal PF552_08020 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit PF552_08025 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit PF552_08025 IPR015889 Intradiol ring-cleavage dioxygenase, core PF552_08025 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal PF552_08030 IPR018508 3-dehydroquinate dehydratase, active site PF552_08030 IPR013785 Aldolase-type TIM barrel PF552_08030 IPR001381 3-dehydroquinate dehydratase type I PF552_08035 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain PF552_08035 IPR006626 Parallel beta-helix repeat PF552_08035 IPR012334 Pectin lyase fold PF552_08035 IPR011050 Pectin lyase fold/virulence factor PF552_08040 IPR038673 Carbohydrate-selective porin OprB superfamily PF552_08040 IPR007049 Carbohydrate-selective porin OprB PF552_08045 IPR001479 Quinoprotein dehydrogenase, conserved site PF552_08045 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PF552_08045 IPR002372 Pyrrolo-quinoline quinone repeat PF552_08045 IPR017511 PQQ-dependent membrane bound dehydrogenase PF552_08045 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PF552_08055 IPR007272 Sulphur transport domain PF552_08065 IPR001279 Metallo-beta-lactamase PF552_08065 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_08070 IPR029016 GAF-like domain superfamily PF552_08070 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR PF552_08070 IPR014757 Transcription regulator IclR, C-terminal PF552_08070 IPR005471 Transcription regulator IclR, N-terminal PF552_08070 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08070 IPR036390 Winged helix DNA-binding domain superfamily PF552_08075 IPR005119 LysR, substrate-binding PF552_08075 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08075 IPR036390 Winged helix DNA-binding domain superfamily PF552_08075 IPR000847 Transcription regulator HTH, LysR PF552_08075 IPR037416 Nodulation protein D, PBP2 PF552_08080 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_08080 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_08080 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_08080 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_08080 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_08080 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_08080 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_08095 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_08095 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_08095 IPR036291 NAD(P)-binding domain superfamily PF552_08105 IPR036259 MFS transporter superfamily PF552_08105 IPR020846 Major facilitator superfamily domain PF552_08105 IPR011701 Major facilitator superfamily PF552_08115 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit PF552_08115 IPR023631 Amidase signature domain PF552_08115 IPR020556 Amidase, conserved site PF552_08115 IPR000120 Amidase PF552_08115 IPR036928 Amidase signature (AS) superfamily PF552_08120 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PF552_08120 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_08120 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_08120 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_08135 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PF552_08135 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PF552_08135 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site PF552_08135 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain PF552_08135 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit PF552_08135 IPR017639 Benzoate 1,2-dioxygenase, large subunit PF552_08145 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PF552_08145 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_08145 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_08145 IPR036291 NAD(P)-binding domain superfamily PF552_08150 IPR036010 2Fe-2S ferredoxin-like superfamily PF552_08150 IPR017938 Riboflavin synthase-like beta-barrel PF552_08150 IPR000951 Phthalate dioxygenase reductase PF552_08150 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_08150 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_08150 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_08150 IPR012675 Beta-grasp domain superfamily PF552_08150 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PF552_08150 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PF552_08155 IPR036390 Winged helix DNA-binding domain superfamily PF552_08155 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08155 IPR012349 FMN-binding split barrel PF552_08155 IPR002563 Flavin reductase like domain PF552_08160 IPR014710 RmlC-like jelly roll fold PF552_08160 IPR037923 Transcription regulator HTH-like PF552_08160 IPR023609 Transcription regulator HTH, RhaS PF552_08160 IPR003313 AraC-type arabinose-binding/dimerisation domain PF552_08160 IPR020449 Transcription regulator HTH, AraC- type PF552_08160 IPR018060 DNA binding HTH domain, AraC-type PF552_08160 IPR009057 Homeobox-like domain superfamily PF552_08165 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily PF552_08165 IPR015802 Copper amine oxidase, N3-terminal PF552_08165 IPR015800 Copper amine oxidase, N2-terminal PF552_08165 IPR016182 Copper amine oxidase, N-terminal PF552_08165 IPR036460 Copper amine oxidase, catalytic domain superfamily PF552_08165 IPR015798 Copper amine oxidase, catalytic domain PF552_08165 IPR012854 Copper amine oxidase-like, N-terminal PF552_08165 IPR000269 Copper amine oxidase PF552_08175 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_08175 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_08175 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_08175 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_08175 IPR015590 Aldehyde dehydrogenase domain PF552_08175 IPR016161 Aldehyde/histidinol dehydrogenase PF552_08180 IPR029055 Nucleophile aminohydrolases, N-terminal PF552_08180 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase PF552_08180 IPR014395 Penicillin/GL-7-ACA/AHL acylase PF552_08180 IPR033813 Penicillin G acylase, C-terminal PF552_08180 IPR023343 Penicillin amidase type, domain 1 PF552_08185 IPR026968 3-oxoadipate enol-lactonase 1/2 PF552_08185 IPR022742 Serine aminopeptidase, S33 PF552_08185 IPR000073 Alpha/beta hydrolase fold-1 PF552_08185 IPR029058 Alpha/Beta hydrolase fold PF552_08190 IPR020613 Thiolase, conserved site PF552_08190 IPR020610 Thiolase, active site PF552_08190 IPR012793 Beta-ketoadipyl CoA thiolase PF552_08190 IPR002155 Thiolase PF552_08190 IPR016039 Thiolase-like PF552_08190 IPR020615 Thiolase, acyl-enzyme intermediate active site PF552_08190 IPR020616 Thiolase, N-terminal PF552_08190 IPR020617 Thiolase, C-terminal PF552_08195 IPR012791 3-oxoacid CoA-transferase, subunit B PF552_08195 IPR004165 Coenzyme A transferase family I PF552_08195 IPR004164 Coenzyme A transferase active site PF552_08195 IPR037171 NagB/RpiA transferase-like PF552_08200 IPR004163 Coenzyme A transferase binding site PF552_08200 IPR037171 NagB/RpiA transferase-like PF552_08200 IPR004165 Coenzyme A transferase family I PF552_08200 IPR012792 3-oxoacid CoA-transferase, subunit A PF552_08205 IPR007535 Catechol dioxygenase, N-terminal PF552_08205 IPR012801 Catechol 1,2-dioxygenase, proteobacteria PF552_08205 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal PF552_08205 IPR015889 Intradiol ring-cleavage dioxygenase, core PF552_08210 IPR011008 Dimeric alpha-beta barrel PF552_08210 IPR026029 Muconolactone isomerase domain PF552_08210 IPR003464 Muconolactone delta-isomerase PF552_08215 IPR029017 Enolase-like, N-terminal PF552_08215 IPR013370 Muconate/chloromuconate cycloisomerase PF552_08215 IPR036849 Enolase-like, C-terminal domain superfamily PF552_08215 IPR029065 Enolase C-terminal domain-like PF552_08215 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site PF552_08215 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PF552_08215 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PF552_08220 IPR036390 Winged helix DNA-binding domain superfamily PF552_08220 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08220 IPR000847 Transcription regulator HTH, LysR PF552_08220 IPR005119 LysR, substrate-binding PF552_08230 IPR000524 Transcription regulator HTH, GntR PF552_08230 IPR008920 Transcription regulator FadR/GntR, C-terminal PF552_08230 IPR011711 GntR, C-terminal PF552_08230 IPR036390 Winged helix DNA-binding domain superfamily PF552_08230 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08235 IPR042096 Dihydroxy-acid dehydratase, C-terminal PF552_08235 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase PF552_08235 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site PF552_08235 IPR037237 IlvD/EDD, N-terminal domain PF552_08240 IPR036259 MFS transporter superfamily PF552_08240 IPR020846 Major facilitator superfamily domain PF552_08240 IPR011701 Major facilitator superfamily PF552_08250 IPR016161 Aldehyde/histidinol dehydrogenase PF552_08250 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_08250 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_08250 IPR015590 Aldehyde dehydrogenase domain PF552_08255 IPR011009 Protein kinase-like domain superfamily PF552_08255 IPR024165 Aminoglycoside 3-phosphotransferase PF552_08255 IPR002575 Aminoglycoside phosphotransferase PF552_08270 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_08270 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_08270 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_08270 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_08270 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_08270 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_08270 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_08275 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_08275 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_08275 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PF552_08275 IPR036291 NAD(P)-binding domain superfamily PF552_08280 IPR002078 RNA polymerase sigma factor 54 interaction domain PF552_08280 IPR025944 Sigma-54 interaction domain, conserved site PF552_08280 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PF552_08280 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal PF552_08280 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_08280 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR PF552_08280 IPR002197 DNA binding HTH domain, Fis-type PF552_08280 IPR009057 Homeobox-like domain superfamily PF552_08280 IPR003593 AAA+ ATPase domain PF552_08285 IPR025110 AMP-binding enzyme, C-terminal domain PF552_08285 IPR020845 AMP-binding, conserved site PF552_08285 IPR000873 AMP-dependent synthetase/ligase PF552_08285 IPR042099 AMP-dependent synthetase-like superfamily PF552_08290 IPR007436 Protein of unknown function DUF485 PF552_08295 IPR014083 Cation/acetate symporter ActP PF552_08295 IPR038377 Sodium/glucose symporter superfamily PF552_08295 IPR001734 Sodium/solute symporter PF552_08295 IPR018212 Sodium/solute symporter, conserved site PF552_08300 IPR036291 NAD(P)-binding domain superfamily PF552_08300 IPR020843 Polyketide synthase, enoylreductase domain PF552_08300 IPR013154 Alcohol dehydrogenase, N-terminal PF552_08300 IPR011032 GroES-like superfamily PF552_08300 IPR013149 Alcohol dehydrogenase, C-terminal PF552_08325 IPR029058 Alpha/Beta hydrolase fold PF552_08325 IPR000073 Alpha/beta hydrolase fold-1 PF552_08325 IPR000639 Epoxide hydrolase-like PF552_08330 IPR010582 Catalase immune-responsive domain PF552_08330 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 PF552_08330 IPR002226 Catalase haem-binding site PF552_08330 IPR037060 Catalase core domain superfamily PF552_08330 IPR011614 Catalase core domain PF552_08330 IPR040333 Catalase, clade 3 PF552_08330 IPR018028 Catalase, mono-functional, haem-containing PF552_08330 IPR020835 Catalase superfamily PF552_08330 IPR024708 Catalase active site PF552_08350 IPR013094 Alpha/beta hydrolase fold-3 PF552_08350 IPR029058 Alpha/Beta hydrolase fold PF552_08355 IPR000835 MarR-type HTH domain PF552_08355 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08355 IPR036390 Winged helix DNA-binding domain superfamily PF552_08360 IPR023753 FAD/NAD(P)-binding domain PF552_08360 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_08360 IPR013785 Aldolase-type TIM barrel PF552_08360 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PF552_08370 IPR011789 Cu(I)-responsive transcriptional regulator PF552_08370 IPR009061 Putative DNA-binding domain superfamily PF552_08370 IPR000551 MerR-type HTH domain PF552_08370 IPR015358 Transcription regulator MerR, DNA binding PF552_08380 IPR023753 FAD/NAD(P)-binding domain PF552_08380 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_08390 IPR001279 Metallo-beta-lactamase PF552_08390 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D PF552_08390 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_08395 IPR013570 Transcription regulator YsiA, C-terminal PF552_08395 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PF552_08395 IPR001647 DNA-binding HTH domain, TetR-type PF552_08395 IPR009057 Homeobox-like domain superfamily PF552_08405 IPR000868 Isochorismatase-like PF552_08405 IPR036380 Isochorismatase-like superfamily PF552_08410 IPR036390 Winged helix DNA-binding domain superfamily PF552_08410 IPR005119 LysR, substrate-binding PF552_08410 IPR000847 Transcription regulator HTH, LysR PF552_08410 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08415 IPR012938 Glucose/Sorbosone dehydrogenase PF552_08415 IPR019893 PQQ-dependent dehydrogenase, s-GDH family PF552_08415 IPR011042 Six-bladed beta-propeller, TolB-like PF552_08415 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase PF552_08420 IPR036291 NAD(P)-binding domain superfamily PF552_08420 IPR004771 K+/H+ exchanger PF552_08420 IPR006153 Cation/H+ exchanger PF552_08420 IPR003148 Regulator of K+ conductance, N-terminal PF552_08420 IPR038770 Sodium/solute symporter superfamily PF552_08430 IPR036264 Bacterial exopeptidase dimerisation domain PF552_08430 IPR017439 Amidohydrolase PF552_08430 IPR011650 Peptidase M20, dimerisation domain PF552_08430 IPR002933 Peptidase M20 PF552_08465 IPR002110 Ankyrin repeat PF552_08465 IPR020683 Ankyrin repeat-containing domain PF552_08465 IPR018756 Domain of unknown function DUF2314 PF552_08465 IPR036770 Ankyrin repeat-containing domain superfamily PF552_08470 IPR011701 Major facilitator superfamily PF552_08470 IPR020846 Major facilitator superfamily domain PF552_08470 IPR036259 MFS transporter superfamily PF552_08475 IPR006680 Amidohydrolase-related PF552_08475 IPR032466 Metal-dependent hydrolase PF552_08485 IPR011663 UbiC transcription regulator-associated PF552_08485 IPR036390 Winged helix DNA-binding domain superfamily PF552_08485 IPR000524 Transcription regulator HTH, GntR PF552_08485 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PF552_08485 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08490 IPR011042 Six-bladed beta-propeller, TolB-like PF552_08490 IPR013658 SMP-30/Gluconolactonase/LRE-like region PF552_08490 IPR005511 Senescence marker protein-30 (SMP-30) PF552_08500 IPR005119 LysR, substrate-binding PF552_08500 IPR000847 Transcription regulator HTH, LysR PF552_08500 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08500 IPR036390 Winged helix DNA-binding domain superfamily PF552_08515 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PF552_08530 IPR011006 CheY-like superfamily PF552_08530 IPR009057 Homeobox-like domain superfamily PF552_08530 IPR018060 DNA binding HTH domain, AraC-type PF552_08530 IPR001789 Signal transduction response regulator, receiver domain PF552_08535 IPR006076 FAD dependent oxidoreductase PF552_08535 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_08545 IPR000390 Small multidrug resistance protein family PF552_08555 IPR006076 FAD dependent oxidoreductase PF552_08555 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_08575 IPR016161 Aldehyde/histidinol dehydrogenase PF552_08575 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_08575 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_08575 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent PF552_08575 IPR015590 Aldehyde dehydrogenase domain PF552_08575 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_08590 IPR002307 Tyrosine-tRNA ligase PF552_08590 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 PF552_08590 IPR036986 RNA-binding S4 domain superfamily PF552_08590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_08590 IPR002305 Aminoacyl-tRNA synthetase, class Ic PF552_08590 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PF552_08590 IPR002942 RNA-binding S4 domain PF552_08590 IPR024088 Tyrosine-tRNA ligase, bacterial-type PF552_08595 IPR004734 Multidrug resistance protein PF552_08595 IPR036259 MFS transporter superfamily PF552_08595 IPR020846 Major facilitator superfamily domain PF552_08595 IPR011701 Major facilitator superfamily PF552_08595 IPR004812 Drug resistance transporter Bcr/CmlA subfamily PF552_08605 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily PF552_08605 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit PF552_08605 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit PF552_08605 IPR011234 Fumarylacetoacetase-like, C-terminal PF552_08610 IPR011234 Fumarylacetoacetase-like, C-terminal PF552_08610 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily PF552_08610 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit PF552_08610 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit PF552_08615 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_08615 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_08615 IPR015590 Aldehyde dehydrogenase domain PF552_08615 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase PF552_08615 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_08615 IPR016161 Aldehyde/histidinol dehydrogenase PF552_08615 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_08620 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase PF552_08620 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B PF552_08625 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase PF552_08625 IPR014347 Tautomerase/MIF superfamily PF552_08630 IPR011234 Fumarylacetoacetase-like, C-terminal PF552_08630 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily PF552_08630 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase PF552_08635 IPR040442 Pyruvate kinase-like domain superfamily PF552_08635 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase PF552_08635 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PF552_08635 IPR005000 HpcH/HpaI aldolase/citrate lyase domain PF552_08635 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales PF552_08640 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_08640 IPR016161 Aldehyde/histidinol dehydrogenase PF552_08640 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_08640 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_08640 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_08640 IPR010102 Succinate semialdehyde dehydrogenase PF552_08640 IPR015590 Aldehyde dehydrogenase domain PF552_08645 IPR005828 Major facilitator, sugar transporter-like PF552_08645 IPR036259 MFS transporter superfamily PF552_08645 IPR004736 MFS transporter, metabolite:H symporter PF552_08645 IPR005829 Sugar transporter, conserved site PF552_08645 IPR020846 Major facilitator superfamily domain PF552_08645 IPR011701 Major facilitator superfamily PF552_08650 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_08650 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_08650 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PF552_08650 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_08655 IPR002563 Flavin reductase like domain PF552_08655 IPR012349 FMN-binding split barrel PF552_08655 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08655 IPR036390 Winged helix DNA-binding domain superfamily PF552_08660 IPR012712 HTH-type transcriptional regulator HpaR/FarR PF552_08660 IPR000835 MarR-type HTH domain PF552_08660 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08660 IPR036390 Winged helix DNA-binding domain superfamily PF552_08660 IPR023187 Transcriptional regulator MarR-type, conserved site PF552_08665 IPR015590 Aldehyde dehydrogenase domain PF552_08665 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_08665 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_08665 IPR016161 Aldehyde/histidinol dehydrogenase PF552_08670 IPR042096 Dihydroxy-acid dehydratase, C-terminal PF552_08670 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase PF552_08670 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site PF552_08670 IPR037237 IlvD/EDD, N-terminal domain PF552_08680 IPR005119 LysR, substrate-binding PF552_08680 IPR000847 Transcription regulator HTH, LysR PF552_08680 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08680 IPR036390 Winged helix DNA-binding domain superfamily PF552_08685 IPR001509 NAD-dependent epimerase/dehydratase PF552_08685 IPR036291 NAD(P)-binding domain superfamily PF552_08690 IPR011701 Major facilitator superfamily PF552_08690 IPR036259 MFS transporter superfamily PF552_08690 IPR020846 Major facilitator superfamily domain PF552_08695 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site PF552_08695 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_08695 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PF552_08695 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PF552_08695 IPR015815 3-hydroxyisobutyrate dehydrogenase-related PF552_08695 IPR036291 NAD(P)-binding domain superfamily PF552_08695 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain PF552_08695 IPR006398 2-hydroxy-3-oxopropionate reductase PF552_08700 IPR009594 Transcription regulator HTH, AraC, N-terminal PF552_08700 IPR009057 Homeobox-like domain superfamily PF552_08700 IPR018060 DNA binding HTH domain, AraC-type PF552_08715 IPR020843 Polyketide synthase, enoylreductase domain PF552_08715 IPR036291 NAD(P)-binding domain superfamily PF552_08715 IPR011032 GroES-like superfamily PF552_08715 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PF552_08715 IPR013149 Alcohol dehydrogenase, C-terminal PF552_08715 IPR013154 Alcohol dehydrogenase, N-terminal PF552_08725 IPR037294 ABC transporter, BtuC-like PF552_08725 IPR000522 ABC transporter, permease protein, BtuC-like PF552_08730 IPR003593 AAA+ ATPase domain PF552_08730 IPR003439 ABC transporter-like PF552_08730 IPR017871 ABC transporter, conserved site PF552_08730 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_08750 IPR000836 Phosphoribosyltransferase domain PF552_08750 IPR029057 Phosphoribosyltransferase-like PF552_08750 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site PF552_08750 IPR005946 Ribose-phosphate pyrophosphokinase PF552_08750 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain PF552_08750 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type PF552_08755 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase PF552_08755 IPR013785 Aldolase-type TIM barrel PF552_08755 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal PF552_08755 IPR016471 Nicotinamide phosphoribosyl transferase PF552_08770 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PF552_08775 IPR036259 MFS transporter superfamily PF552_08775 IPR020846 Major facilitator superfamily domain PF552_08775 IPR011701 Major facilitator superfamily PF552_08775 IPR004638 Drug resistance transporter EmrB-like PF552_08800 IPR036523 SurE-like phosphatase/nucleotidase superfamily PF552_08800 IPR002828 Survival protein SurE-like phosphatase/nucleotidase PF552_08800 IPR030048 Survival protein SurE PF552_08820 IPR036390 Winged helix DNA-binding domain superfamily PF552_08820 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08820 IPR000847 Transcription regulator HTH, LysR PF552_08825 IPR011701 Major facilitator superfamily PF552_08825 IPR020846 Major facilitator superfamily domain PF552_08825 IPR036259 MFS transporter superfamily PF552_08830 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PF552_08830 IPR036736 ACP-like superfamily PF552_08830 IPR013120 Male sterility, NAD-binding PF552_08830 IPR036291 NAD(P)-binding domain superfamily PF552_08830 IPR009081 Phosphopantetheine binding ACP domain PF552_08830 IPR010080 Thioester reductase-like domain PF552_08860 IPR023985 Mycofactocin-dependent oxidoreductase PF552_08860 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_08860 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_08860 IPR036291 NAD(P)-binding domain superfamily PF552_08870 IPR018062 HTH domain AraC-type, conserved site PF552_08870 IPR020449 Transcription regulator HTH, AraC- type PF552_08870 IPR003313 AraC-type arabinose-binding/dimerisation domain PF552_08870 IPR009057 Homeobox-like domain superfamily PF552_08870 IPR037923 Transcription regulator HTH-like PF552_08870 IPR018060 DNA binding HTH domain, AraC-type PF552_08875 IPR038404 TRAP transporter solute receptor DctP superfamily PF552_08880 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_08880 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_08880 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_08880 IPR032404 Two-component sensor protein CpxA, periplasmic domain PF552_08880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_08880 IPR003594 Histidine kinase/HSP90-like ATPase PF552_08880 IPR003660 HAMP domain PF552_08880 IPR038515 CpxA, periplasmic domain superfamily PF552_08880 IPR005467 Histidine kinase domain PF552_08885 IPR011006 CheY-like superfamily PF552_08885 IPR001867 OmpR/PhoB-type DNA-binding domain PF552_08885 IPR001789 Signal transduction response regulator, receiver domain PF552_08885 IPR039420 Transcriptional regulatory protein WalR-like PF552_08885 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_08890 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PF552_08890 IPR006143 RND efflux pump, membrane fusion protein PF552_08895 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PF552_08895 IPR001036 Acriflavin resistance protein PF552_08895 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PF552_08900 IPR003439 ABC transporter-like PF552_08900 IPR017871 ABC transporter, conserved site PF552_08900 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_08900 IPR004602 UvrABC system subunit A PF552_08900 IPR041552 UvrA DNA-binding domain PF552_08900 IPR041102 UvrA, interaction domain PF552_08920 IPR020843 Polyketide synthase, enoylreductase domain PF552_08920 IPR014183 Alcohol dehydrogenase class III PF552_08920 IPR013149 Alcohol dehydrogenase, C-terminal PF552_08920 IPR013154 Alcohol dehydrogenase, N-terminal PF552_08920 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PF552_08920 IPR011032 GroES-like superfamily PF552_08920 IPR036291 NAD(P)-binding domain superfamily PF552_08930 IPR020835 Catalase superfamily PF552_08930 IPR011614 Catalase core domain PF552_08945 IPR030871 Cardiolipin synthase C PF552_08945 IPR025202 Phospholipase D-like domain PF552_08945 IPR001736 Phospholipase D/Transphosphatidylase PF552_08960 IPR000180 Membrane dipeptidase, active site PF552_08960 IPR032466 Metal-dependent hydrolase PF552_08960 IPR008257 Peptidase M19 PF552_08965 IPR023885 4Fe4S-binding SPASM domain PF552_08965 IPR013785 Aldolase-type TIM barrel PF552_08965 IPR006638 Elp3/MiaB/NifB PF552_08965 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site PF552_08965 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria PF552_08965 IPR017200 Coenzyme PQQ synthesis protein E PF552_08965 IPR007197 Radical SAM PF552_08970 IPR022479 Coenzyme PQQ synthesis D, bacteria PF552_08970 IPR008792 Coenzyme PQQ synthesis protein D PF552_08970 IPR041881 Coenzyme PQQ synthesis protein D superfamily PF552_08975 IPR016084 Haem oxygenase-like, multi-helical PF552_08975 IPR011845 Coenzyme PQQ biosynthesis protein C PF552_08975 IPR039068 Pyrroloquinoline-quinone synthase-like PF552_08975 IPR004305 Thiaminase-2/PQQC PF552_08980 IPR001279 Metallo-beta-lactamase PF552_08980 IPR011842 Coenzyme PQQ biosynthesis protein B PF552_08980 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_08985 IPR011725 Coenzyme PQQ biosynthesis protein A PF552_08990 IPR036832 Polyphosphate kinase N-terminal domain superfamily PF552_08990 IPR025198 Polyphosphate kinase N-terminal domain PF552_08990 IPR024953 Polyphosphate kinase middle domain PF552_08990 IPR036830 Polyphosphate kinase middle domain superfamily PF552_08990 IPR041108 Polyphosphate kinase, C-terminal domain 1 PF552_08990 IPR003414 Polyphosphate kinase PF552_08990 IPR025200 Polyphosphate kinase C-terminal domain 2 PF552_08995 IPR006179 5'-Nucleotidase/apyrase PF552_08995 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PF552_08995 IPR029052 Metallo-dependent phosphatase-like PF552_09005 IPR009081 Phosphopantetheine binding ACP domain PF552_09005 IPR036736 ACP-like superfamily PF552_09005 IPR000868 Isochorismatase-like PF552_09005 IPR036380 Isochorismatase-like superfamily PF552_09005 IPR016291 Isochorismatase PF552_09010 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase PF552_09010 IPR036291 NAD(P)-binding domain superfamily PF552_09010 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_09010 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_09015 IPR005116 Transport-associated OB, type 1 PF552_09015 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09015 IPR011868 Molybdate ABC transporter, ATP-binding protein PF552_09015 IPR004606 Molybdenum-pterin binding PF552_09015 IPR015852 ABC transporter, molybdenum import, ModC PF552_09015 IPR017871 ABC transporter, conserved site PF552_09015 IPR003439 ABC transporter-like PF552_09015 IPR008995 Molybdate/tungstate binding, C-terminal PF552_09015 IPR003593 AAA+ ATPase domain PF552_09020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_09020 IPR035906 MetI-like superfamily PF552_09020 IPR011867 Molybdate ABC transporter, permease protein PF552_09025 IPR005950 Molybdate ABC transporter, substrate-binding protein PF552_09030 IPR036390 Winged helix DNA-binding domain superfamily PF552_09030 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_09030 IPR000847 Transcription regulator HTH, LysR PF552_09030 IPR005116 Transport-associated OB, type 1 PF552_09030 IPR003725 Molybdenum-binding protein ModE, N-terminal PF552_09030 IPR016462 Molybdate-dependent transcriptional regulator ModE PF552_09030 IPR004606 Molybdenum-pterin binding PF552_09030 IPR008995 Molybdate/tungstate binding, C-terminal PF552_09035 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit PF552_09035 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain PF552_09035 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PF552_09035 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PF552_09035 IPR017638 Anthranilate 1,2-dioxygenase, large subunit PF552_09035 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site PF552_09040 IPR017640 Anthranilate 1,2-dioxygenase, small subunit PF552_09040 IPR032710 NTF2-like domain superfamily PF552_09040 IPR000391 Ring-hydroxylating dioxygenase beta subunit PF552_09045 IPR036010 2Fe-2S ferredoxin-like superfamily PF552_09045 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PF552_09045 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PF552_09045 IPR012675 Beta-grasp domain superfamily PF552_09045 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PF552_09045 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_09045 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_09045 IPR017938 Riboflavin synthase-like beta-barrel PF552_09045 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_09050 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like PF552_09050 IPR009057 Homeobox-like domain superfamily PF552_09050 IPR037923 Transcription regulator HTH-like PF552_09050 IPR018060 DNA binding HTH domain, AraC-type PF552_09050 IPR018062 HTH domain AraC-type, conserved site PF552_09060 IPR002563 Flavin reductase like domain PF552_09060 IPR012349 FMN-binding split barrel PF552_09060 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_09060 IPR036390 Winged helix DNA-binding domain superfamily PF552_09070 IPR036291 NAD(P)-binding domain superfamily PF552_09070 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_09070 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_09075 IPR002925 Dienelactone hydrolase PF552_09075 IPR029058 Alpha/Beta hydrolase fold PF552_09080 IPR005829 Sugar transporter, conserved site PF552_09080 IPR020846 Major facilitator superfamily domain PF552_09080 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family PF552_09080 IPR011701 Major facilitator superfamily PF552_09080 IPR036259 MFS transporter superfamily PF552_09085 IPR018060 DNA binding HTH domain, AraC-type PF552_09085 IPR009594 Transcription regulator HTH, AraC, N-terminal PF552_09085 IPR009057 Homeobox-like domain superfamily PF552_09090 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_09090 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_09090 IPR036291 NAD(P)-binding domain superfamily PF552_09090 IPR011294 3-hydroxybutyrate dehydrogenase PF552_09095 IPR003474 Gluconate transporter PF552_09105 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_09105 IPR000847 Transcription regulator HTH, LysR PF552_09105 IPR005119 LysR, substrate-binding PF552_09105 IPR036390 Winged helix DNA-binding domain superfamily PF552_09110 IPR037171 NagB/RpiA transferase-like PF552_09110 IPR012792 3-oxoacid CoA-transferase, subunit A PF552_09110 IPR004163 Coenzyme A transferase binding site PF552_09110 IPR004165 Coenzyme A transferase family I PF552_09115 IPR004165 Coenzyme A transferase family I PF552_09115 IPR012791 3-oxoacid CoA-transferase, subunit B PF552_09115 IPR004164 Coenzyme A transferase active site PF552_09115 IPR037171 NagB/RpiA transferase-like PF552_09120 IPR006161 Conserved hypothetical protein CHP00336 PF552_09120 IPR006160 Short chain fatty acid transporter AtoE PF552_09125 IPR002155 Thiolase PF552_09125 IPR016039 Thiolase-like PF552_09125 IPR020610 Thiolase, active site PF552_09125 IPR020615 Thiolase, acyl-enzyme intermediate active site PF552_09125 IPR020613 Thiolase, conserved site PF552_09125 IPR020616 Thiolase, N-terminal PF552_09125 IPR020617 Thiolase, C-terminal PF552_09130 IPR005119 LysR, substrate-binding PF552_09130 IPR000847 Transcription regulator HTH, LysR PF552_09130 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_09130 IPR036390 Winged helix DNA-binding domain superfamily PF552_09135 IPR005119 LysR, substrate-binding PF552_09135 IPR000847 Transcription regulator HTH, LysR PF552_09135 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_09135 IPR036390 Winged helix DNA-binding domain superfamily PF552_09150 IPR024083 Fumarase/histidase, N-terminal PF552_09150 IPR018951 Fumarase C, C-terminal PF552_09150 IPR004708 Aspartate ammonia-lyase PF552_09150 IPR000362 Fumarate lyase family PF552_09150 IPR020557 Fumarate lyase, conserved site PF552_09150 IPR022761 Fumarate lyase, N-terminal PF552_09150 IPR008948 L-Aspartase-like PF552_09155 IPR010105 TonB-dependent siderophore receptor PF552_09155 IPR010917 TonB-dependent receptor, conserved site PF552_09155 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_09155 IPR010916 TonB box, conserved site PF552_09155 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_09155 IPR039423 TonB-dependent receptor-like PF552_09155 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_09155 IPR012910 TonB-dependent receptor, plug domain PF552_09155 IPR030149 TonB-dependent siderophore receptor FcuA/FatA PF552_09160 IPR004736 MFS transporter, metabolite:H symporter PF552_09160 IPR036259 MFS transporter superfamily PF552_09160 IPR005828 Major facilitator, sugar transporter-like PF552_09160 IPR020846 Major facilitator superfamily domain PF552_09160 IPR005829 Sugar transporter, conserved site PF552_09175 IPR017871 ABC transporter, conserved site PF552_09175 IPR015859 ABC transporter, taurine import, TauD PF552_09175 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09175 IPR003593 AAA+ ATPase domain PF552_09175 IPR003439 ABC transporter-like PF552_09180 IPR035906 MetI-like superfamily PF552_09180 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_09185 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain PF552_09185 IPR010068 Taurine ABC transporter, substrate-binding protein TauA PF552_09185 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PF552_09200 IPR000524 Transcription regulator HTH, GntR PF552_09200 IPR011663 UbiC transcription regulator-associated PF552_09200 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PF552_09200 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_09200 IPR036390 Winged helix DNA-binding domain superfamily PF552_09205 IPR014047 Chromate transporter, long chain PF552_09205 IPR003370 Chromate transporter PF552_09210 IPR023048 NADH-azoreductase, FMN-dependent PF552_09210 IPR029039 Flavoprotein-like superfamily PF552_09210 IPR003680 Flavodoxin-like fold PF552_09215 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_09215 IPR002577 Helix-turn-helix, HxlR type PF552_09215 IPR036390 Winged helix DNA-binding domain superfamily PF552_09220 IPR029442 GyrI-like small molecule binding domain PF552_09220 IPR009057 Homeobox-like domain superfamily PF552_09220 IPR010499 Bacterial transcription activator, effector binding PF552_09220 IPR018060 DNA binding HTH domain, AraC-type PF552_09220 IPR011256 Regulatory factor, effector binding domain superfamily PF552_09220 IPR018062 HTH domain AraC-type, conserved site PF552_09220 IPR020449 Transcription regulator HTH, AraC- type PF552_09235 IPR002781 Transmembrane protein TauE-like PF552_09250 IPR005939 Beta-lactamase hydrolase-like PF552_09250 IPR029021 Protein-tyrosine phosphatase-like PF552_09250 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_09250 IPR001279 Metallo-beta-lactamase PF552_09255 IPR001789 Signal transduction response regulator, receiver domain PF552_09255 IPR025944 Sigma-54 interaction domain, conserved site PF552_09255 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PF552_09255 IPR002078 RNA polymerase sigma factor 54 interaction domain PF552_09255 IPR009057 Homeobox-like domain superfamily PF552_09255 IPR002197 DNA binding HTH domain, Fis-type PF552_09255 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09255 IPR010114 DNA-binding transcriptional regulator NtrC PF552_09255 IPR003593 AAA+ ATPase domain PF552_09255 IPR011006 CheY-like superfamily PF552_09260 IPR021134 Bestrophin/UPF0187 PF552_09265 IPR013149 Alcohol dehydrogenase, C-terminal PF552_09265 IPR013154 Alcohol dehydrogenase, N-terminal PF552_09265 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PF552_09265 IPR011032 GroES-like superfamily PF552_09265 IPR036291 NAD(P)-binding domain superfamily PF552_09265 IPR020843 Polyketide synthase, enoylreductase domain PF552_09270 IPR014007 Acetoin reductase PF552_09270 IPR036291 NAD(P)-binding domain superfamily PF552_09270 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_09270 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_09275 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF552_09275 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site PF552_09275 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I PF552_09275 IPR006258 Dihydrolipoamide dehydrogenase PF552_09275 IPR023753 FAD/NAD(P)-binding domain PF552_09275 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_09275 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PF552_09280 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PF552_09280 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PF552_09280 IPR000089 Biotin/lipoyl attachment PF552_09280 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PF552_09280 IPR036625 E3-binding domain superfamily PF552_09280 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex PF552_09280 IPR004167 Peripheral subunit-binding domain PF552_09280 IPR011053 Single hybrid motif PF552_09285 IPR005475 Transketolase-like, pyrimidine-binding domain PF552_09285 IPR029061 Thiamin diphosphate-binding fold PF552_09285 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PF552_09285 IPR033248 Transketolase, C-terminal domain PF552_09290 IPR001017 Dehydrogenase, E1 component PF552_09290 IPR029061 Thiamin diphosphate-binding fold PF552_09295 IPR006638 Elp3/MiaB/NifB PF552_09295 IPR003698 Lipoyl synthase PF552_09295 IPR007197 Radical SAM PF552_09295 IPR013785 Aldolase-type TIM barrel PF552_09310 IPR000700 PAS-associated, C-terminal PF552_09310 IPR035965 PAS domain superfamily PF552_09310 IPR013656 PAS fold-4 PF552_09310 IPR029787 Nucleotide cyclase PF552_09310 IPR000160 GGDEF domain PF552_09310 IPR000014 PAS domain PF552_09315 IPR000453 Chorismate synthase PF552_09315 IPR035904 Chorismate synthase AroC superfamily PF552_09315 IPR020541 Chorismate synthase, conserved site PF552_09320 IPR004556 Methyltransferase HemK-like PF552_09320 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase PF552_09320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_09320 IPR007848 Methyltransferase small domain PF552_09320 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PF552_09325 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PF552_09325 IPR023026 Tryptophan synthase beta chain/beta chain-like PF552_09325 IPR006653 Tryptophan synthase, beta chain, conserved site PF552_09325 IPR001926 Pyridoxal-phosphate dependent enzyme PF552_09325 IPR006654 Tryptophan synthase, beta chain PF552_09335 IPR003593 AAA+ ATPase domain PF552_09335 IPR003959 ATPase, AAA-type, core PF552_09335 IPR005936 Peptidase, FtsH PF552_09335 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09335 IPR000642 Peptidase M41 PF552_09335 IPR037219 Peptidase M41-like PF552_09335 IPR041569 AAA ATPase, AAA+ lid domain PF552_09345 IPR038068 YcgL-like superfamily PF552_09345 IPR027354 YcgL domain PF552_09365 IPR036397 Ribonuclease H superfamily PF552_09365 IPR006292 Ribonuclease D PF552_09365 IPR002121 HRDC domain PF552_09365 IPR010997 HRDC-like superfamily PF552_09365 IPR002562 3'-5' exonuclease domain PF552_09365 IPR012337 Ribonuclease H-like superfamily PF552_09370 IPR000093 DNA recombination protein RecR PF552_09370 IPR023627 Recombination protein RecR PF552_09370 IPR023628 Recombination protein RecR, C4-type zinc finger PF552_09370 IPR015967 Recombination protein RecR, conserved site PF552_09370 IPR006171 TOPRIM domain PF552_09370 IPR034137 RecR, TOPRIM domain PF552_09375 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily PF552_09375 IPR004401 Nucleoid-associated protein YbaB/EbfC family PF552_09385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_09385 IPR015424 Pyridoxal phosphate-dependent transferase PF552_09385 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_09385 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme PF552_09385 IPR006234 O-succinylhomoserine sulfhydrylase PF552_09390 IPR029058 Alpha/Beta hydrolase fold PF552_09390 IPR000073 Alpha/beta hydrolase fold-1 PF552_09390 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit PF552_09395 IPR013216 Methyltransferase type 11 PF552_09395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_09425 IPR011146 HIT-like domain PF552_09425 IPR036265 HIT-like superfamily PF552_09425 IPR019808 Histidine triad, conserved site PF552_09425 IPR039384 HINT family PF552_09425 IPR001310 Histidine triad (HIT) protein PF552_09450 IPR000412 ABC-2 transporter PF552_09455 IPR000412 ABC-2 transporter PF552_09460 IPR003593 AAA+ ATPase domain PF552_09460 IPR003439 ABC transporter-like PF552_09460 IPR017871 ABC transporter, conserved site PF552_09460 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09465 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PF552_09475 IPR003835 Glycosyl transferase, family 19 PF552_09500 IPR002781 Transmembrane protein TauE-like PF552_09505 IPR006218 DAHP synthetase I/KDSA PF552_09505 IPR006219 DHAP synthase, class 1 PF552_09505 IPR013785 Aldolase-type TIM barrel PF552_09510 IPR003805 Adenosylcobinamide-GDP ribazoletransferase PF552_09520 IPR013078 Histidine phosphatase superfamily, clade-1 PF552_09520 IPR029033 Histidine phosphatase superfamily PF552_09520 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site PF552_09525 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal PF552_09525 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like PF552_09525 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic PF552_09525 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily PF552_09530 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase PF552_09530 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09540 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PF552_09540 IPR010976 Beta-phosphoglucomutase hydrolase PF552_09540 IPR036412 HAD-like superfamily PF552_09540 IPR023214 HAD superfamily PF552_09540 IPR041492 Haloacid dehalogenase-like hydrolase PF552_09540 IPR006439 HAD hydrolase, subfamily IA PF552_09565 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_09565 IPR010916 TonB box, conserved site PF552_09565 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_09565 IPR039426 Vitamin B12 transporter BtuB-like PF552_09565 IPR012910 TonB-dependent receptor, plug domain PF552_09565 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_09565 IPR010105 TonB-dependent siderophore receptor PF552_09565 IPR010917 TonB-dependent receptor, conserved site PF552_09570 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PF552_09570 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase PF552_09570 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily PF552_09580 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal PF552_09580 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like PF552_09580 IPR022770 Ferric iron reductase FhuF domain PF552_09585 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like PF552_09585 IPR022770 Ferric iron reductase FhuF domain PF552_09585 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal PF552_09590 IPR036259 MFS transporter superfamily PF552_09590 IPR020846 Major facilitator superfamily domain PF552_09590 IPR011701 Major facilitator superfamily PF552_09595 IPR031043 Putative histamine N-monooxygenase PF552_09595 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase PF552_09595 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_09600 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal PF552_09600 IPR022770 Ferric iron reductase FhuF domain PF552_09600 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like PF552_09605 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily PF552_09605 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PF552_09605 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain PF552_09615 IPR004147 UbiB domain PF552_09615 IPR011009 Protein kinase-like domain superfamily PF552_09620 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_09620 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_09620 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_09620 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_09620 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_09620 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_09620 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_09625 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_09625 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_09625 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_09625 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_09625 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_09625 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_09625 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_09630 IPR033885 Alkane/xylene monooxygenase PF552_09630 IPR005804 Fatty acid desaturase domain PF552_09635 IPR018062 HTH domain AraC-type, conserved site PF552_09635 IPR020449 Transcription regulator HTH, AraC- type PF552_09635 IPR011051 RmlC-like cupin domain superfamily PF552_09635 IPR014710 RmlC-like jelly roll fold PF552_09635 IPR018060 DNA binding HTH domain, AraC-type PF552_09635 IPR009057 Homeobox-like domain superfamily PF552_09635 IPR032783 AraC-type transcription regulator, ligand-binding domain PF552_09640 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type PF552_09640 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PF552_09640 IPR023034 Peptidyl-prolyl isomerase SurA PF552_09640 IPR015391 SurA N-terminal PF552_09640 IPR027304 Trigger factor/SurA domain superfamily PF552_09645 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily PF552_09645 IPR020816 Histone-like DNA-binding protein, conserved site PF552_09645 IPR000119 Histone-like DNA-binding protein PF552_09660 IPR010242 Transcription factor HTH, IscR PF552_09660 IPR030489 Transcription regulator Rrf2-type, conserved site PF552_09660 IPR000944 Transcription regulator Rrf2-type PF552_09660 IPR036390 Winged helix DNA-binding domain superfamily PF552_09660 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_09665 IPR010240 Cysteine desulfurase IscS PF552_09665 IPR016454 Cysteine desulfurase PF552_09665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_09665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_09665 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PF552_09665 IPR015424 Pyridoxal phosphate-dependent transferase PF552_09665 IPR000192 Aminotransferase class V domain PF552_09670 IPR011339 ISC system FeS cluster assembly, IscU scaffold PF552_09670 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal PF552_09675 IPR016092 FeS cluster insertion protein PF552_09675 IPR011302 Iron-binding protein IscA, proteobacteria PF552_09675 IPR035903 HesB-like domain superfamily PF552_09675 IPR017870 FeS cluster insertion, C-terminal, conserved site PF552_09675 IPR000361 FeS cluster biogenesis PF552_09680 IPR036869 Chaperone J-domain superfamily PF552_09680 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain PF552_09680 IPR004640 Co-chaperone Hsc20 PF552_09680 IPR001623 DnaJ domain PF552_09680 IPR036386 HscB, C-terminal domain superfamily PF552_09685 IPR010236 ISC system FeS cluster assembly, HscA chaperone PF552_09685 IPR013126 Heat shock protein 70 family PF552_09685 IPR018181 Heat shock protein 70, conserved site PF552_09685 IPR042039 HscA chaperone, nucleotide-binding domain PF552_09685 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily PF552_09685 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily PF552_09690 IPR036010 2Fe-2S ferredoxin-like superfamily PF552_09690 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PF552_09690 IPR001055 Adrenodoxin PF552_09690 IPR018298 Adrenodoxin, iron-sulphur binding site PF552_09690 IPR012675 Beta-grasp domain superfamily PF552_09690 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria PF552_09695 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase PF552_09695 IPR029787 Nucleotide cyclase PF552_09705 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_09705 IPR011545 DEAD/DEAH box helicase domain PF552_09705 IPR001650 Helicase, C-terminal PF552_09705 IPR003711 CarD-like/TRCF domain PF552_09705 IPR037235 TRCF-like, C-terminal domain PF552_09705 IPR005118 Transcription-repair-coupling factor, C-terminal domain PF552_09705 IPR036101 CarD-like/TRCF domain superfamily PF552_09705 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09705 IPR004576 Transcription-repair coupling factor PF552_09705 IPR041471 UvrB, interaction domain PF552_09725 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PF552_09725 IPR010203 Regulator of ribonuclease activity A PF552_09725 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily PF552_09730 IPR016040 NAD(P)-binding domain PF552_09730 IPR000534 Semialdehyde dehydrogenase, NAD-binding PF552_09730 IPR036291 NAD(P)-binding domain superfamily PF552_09735 IPR036510 Ribosomal protein S20 superfamily PF552_09735 IPR002583 Ribosomal protein S20 PF552_09745 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ PF552_09745 IPR000760 Inositol monophosphatase-like PF552_09745 IPR020583 Inositol monophosphatase, metal-binding site PF552_09745 IPR020550 Inositol monophosphatase, conserved site PF552_09760 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09760 IPR003593 AAA+ ATPase domain PF552_09760 IPR003439 ABC transporter-like PF552_09760 IPR017871 ABC transporter, conserved site PF552_09760 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PF552_09765 IPR035906 MetI-like superfamily PF552_09765 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_09770 IPR035906 MetI-like superfamily PF552_09770 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_09775 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PF552_09775 IPR001567 Peptidase M3A/M3B catalytic domain PF552_09785 IPR023765 Solute-binding protein family 5, conserved site PF552_09785 IPR000914 Solute-binding protein family 5 domain PF552_09785 IPR039424 Solute-binding protein family 5 PF552_09785 IPR030678 Peptide/nickel binding protein, MppA-type PF552_09790 IPR010101 TonB-dependent vitamin B12 transporter BtuB PF552_09790 IPR039426 Vitamin B12 transporter BtuB-like PF552_09790 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_09790 IPR012910 TonB-dependent receptor, plug domain PF552_09790 IPR010916 TonB box, conserved site PF552_09790 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_09790 IPR010917 TonB-dependent receptor, conserved site PF552_09790 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_09800 IPR002898 MotA/TolQ/ExbB proton channel PF552_09805 IPR003400 Biopolymer transport protein ExbD/TolR PF552_09810 IPR003400 Biopolymer transport protein ExbD/TolR PF552_09820 IPR001465 Malate synthase PF552_09820 IPR023310 Malate synthase G, beta sub-domain PF552_09820 IPR006253 Malate synthase G PF552_09820 IPR011076 Malate synthase-like superfamily PF552_09825 IPR030870 Cell division protein ZapE PF552_09825 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09825 IPR005654 ATPase, AFG1-like PF552_09835 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_09835 IPR020946 Flavin monooxygenase-like PF552_09845 IPR013785 Aldolase-type TIM barrel PF552_09845 IPR014732 Orotidine 5'-phosphate decarboxylase PF552_09845 IPR001754 Orotidine 5'-phosphate decarboxylase domain PF552_09845 IPR011060 Ribulose-phosphate binding barrel PF552_09845 IPR018089 Orotidine 5'-phosphate decarboxylase, active site PF552_09855 IPR000119 Histone-like DNA-binding protein PF552_09855 IPR020816 Histone-like DNA-binding protein, conserved site PF552_09855 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily PF552_09855 IPR005685 Integration host factor, beta subunit PF552_09860 IPR003029 S1 domain PF552_09860 IPR022967 RNA-binding domain, S1 PF552_09860 IPR000110 Ribosomal protein S1 PF552_09860 IPR012340 Nucleic acid-binding, OB-fold PF552_09865 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09865 IPR003136 Cytidylate kinase PF552_09865 IPR011994 Cytidylate kinase domain PF552_09875 IPR016193 Cytidine deaminase-like PF552_09875 IPR028883 tRNA-specific adenosine deaminase PF552_09875 IPR016192 APOBEC/CMP deaminase, zinc-binding PF552_09875 IPR002125 Cytidine and deoxycytidylate deaminase domain PF552_09885 IPR002043 Uracil-DNA glycosylase family 1 PF552_09885 IPR018085 Uracil-DNA glycosylase, active site PF552_09885 IPR005122 Uracil-DNA glycosylase-like PF552_09885 IPR036895 Uracil-DNA glycosylase-like domain superfamily PF552_09895 IPR005628 General secretion pathway protein K PF552_09895 IPR038072 GspK, central domain superfamily PF552_09900 IPR010055 Type II secretion system protein J PF552_09900 IPR012902 Prokaryotic N-terminal methylation site PF552_09905 IPR012902 Prokaryotic N-terminal methylation site PF552_09905 IPR003413 Type II secretion system protein I domain PF552_09905 IPR010052 Type II secretion system protein I PF552_09920 IPR018228 Deoxyribonuclease, TatD-related, conserved site PF552_09920 IPR015991 Uncharacterised hydrolase TatD-type PF552_09920 IPR032466 Metal-dependent hydrolase PF552_09920 IPR001130 TatD family PF552_09930 IPR015199 DNA polymerase III, delta subunit, C-terminal PF552_09930 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09930 IPR004622 DNA polymerase III, delta prime subunit PF552_09935 IPR003329 Acylneuraminate cytidylyltransferase PF552_09935 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase PF552_09935 IPR029044 Nucleotide-diphospho-sugar transferases PF552_09940 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09940 IPR003758 Tetraacyldisaccharide 4'-kinase PF552_09945 IPR003439 ABC transporter-like PF552_09945 IPR003593 AAA+ ATPase domain PF552_09945 IPR011527 ABC transporter type 1, transmembrane domain PF552_09945 IPR036640 ABC transporter type 1, transmembrane domain superfamily PF552_09945 IPR017871 ABC transporter, conserved site PF552_09945 IPR011917 ABC transporter, lipid A export, MsbA PF552_09945 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09945 IPR039421 Type I protein exporter PF552_09955 IPR002898 MotA/TolQ/ExbB proton channel PF552_09960 IPR003115 ParB/Sulfiredoxin PF552_09960 IPR036086 ParB/Sulfiredoxin superfamily PF552_09960 IPR041468 ParB/Spo0J, HTH domain PF552_09960 IPR004437 ParB/RepB/Spo0J partition protein PF552_09965 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_09965 IPR025669 AAA domain PF552_09970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_09970 IPR003682 rRNA small subunit methyltransferase G PF552_09975 IPR005835 Nucleotidyl transferase domain PF552_09975 IPR029044 Nucleotide-diphospho-sugar transferases PF552_09980 IPR002575 Aminoglycoside phosphotransferase PF552_09980 IPR011009 Protein kinase-like domain superfamily PF552_09985 IPR007543 LptD, C-terminal PF552_09985 IPR020889 LPS-assembly protein LptD PF552_09985 IPR005653 Organic solvent tolerance-like, N-terminal PF552_09990 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type PF552_09990 IPR023034 Peptidyl-prolyl isomerase SurA PF552_09990 IPR015391 SurA N-terminal PF552_09990 IPR027304 Trigger factor/SurA domain superfamily PF552_09995 IPR000771 Fructose-bisphosphate aldolase, class-II PF552_09995 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype PF552_09995 IPR013785 Aldolase-type TIM barrel PF552_10005 IPR001576 Phosphoglycerate kinase PF552_10005 IPR015824 Phosphoglycerate kinase, N-terminal PF552_10005 IPR036043 Phosphoglycerate kinase superfamily PF552_10005 IPR015911 Phosphoglycerate kinase, conserved site PF552_10015 IPR029001 Inosine triphosphate pyrophosphatase-like PF552_10015 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein PF552_10020 IPR003347 JmjC domain PF552_10020 IPR039994 JmjC domain-containing PF552_10030 IPR011991 ArsR-like helix-turn-helix domain PF552_10030 IPR001845 HTH ArsR-type DNA-binding domain PF552_10030 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10030 IPR036390 Winged helix DNA-binding domain superfamily PF552_10035 IPR023025 Serine/threonine transporter SstT PF552_10035 IPR036458 Sodium:dicarboxylate symporter superfamily PF552_10035 IPR001991 Sodium:dicarboxylate symporter PF552_10040 IPR010699 Protein of unknown function DUF1275 PF552_10045 IPR018636 Protein of unknown function DUF2058 PF552_10050 IPR003593 AAA+ ATPase domain PF552_10050 IPR011527 ABC transporter type 1, transmembrane domain PF552_10050 IPR036640 ABC transporter type 1, transmembrane domain superfamily PF552_10050 IPR003439 ABC transporter-like PF552_10050 IPR039421 Type I protein exporter PF552_10050 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_10050 IPR017871 ABC transporter, conserved site PF552_10060 IPR018060 DNA binding HTH domain, AraC-type PF552_10060 IPR020449 Transcription regulator HTH, AraC- type PF552_10060 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PF552_10060 IPR009057 Homeobox-like domain superfamily PF552_10065 IPR011053 Single hybrid motif PF552_10065 IPR017453 Glycine cleavage system H-protein, subgroup PF552_10065 IPR033753 Glycine cleavage system H-protein/Simiate PF552_10065 IPR002930 Glycine cleavage system H-protein PF552_10065 IPR000089 Biotin/lipoyl attachment PF552_10065 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PF552_10070 IPR003000 Sirtuin family PF552_10070 IPR026591 Sirtuin, catalytic core small domain superfamily PF552_10070 IPR029035 DHS-like NAD/FAD-binding domain superfamily PF552_10070 IPR027546 Sirtuin, class III PF552_10070 IPR026590 Sirtuin family, catalytic core domain PF552_10075 IPR018212 Sodium/solute symporter, conserved site PF552_10075 IPR011851 Sodium/proline symporter PF552_10075 IPR038377 Sodium/glucose symporter superfamily PF552_10075 IPR001734 Sodium/solute symporter PF552_10080 IPR011991 ArsR-like helix-turn-helix domain PF552_10080 IPR000485 AsnC-type HTH domain PF552_10080 IPR011008 Dimeric alpha-beta barrel PF552_10080 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PF552_10080 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PF552_10080 IPR019888 Transcription regulator AsnC-type PF552_10080 IPR036390 Winged helix DNA-binding domain superfamily PF552_10080 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10085 IPR024082 Proline dehydrogenase PutA, domain II PF552_10085 IPR024089 Proline dehydrogenase PutA, domain I/II PF552_10085 IPR024090 Proline dehydrogenase PutA, domain I PF552_10085 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain PF552_10085 IPR002872 Proline dehydrogenase domain PF552_10085 IPR016161 Aldehyde/histidinol dehydrogenase PF552_10085 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_10085 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_10085 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_10085 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_10085 IPR015590 Aldehyde dehydrogenase domain PF552_10085 IPR010985 Ribbon-helix-helix PF552_10085 IPR013321 Arc-type ribbon-helix-helix PF552_10085 IPR029041 FAD-linked oxidoreductase-like PF552_10085 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 PF552_10085 IPR025703 Bifunctional protein PutA PF552_10090 IPR007344 GrpB/Dephospho-CoA kinase PF552_10095 IPR030391 RNA methyltransferase TrmA, conserved site PF552_10095 IPR030390 RNA methyltransferase TrmA, active site PF552_10095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_10095 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA PF552_10095 IPR010280 (Uracil-5)-methyltransferase family PF552_10105 IPR018711 Phosphodiester glycosidase PF552_10115 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PF552_10115 IPR023480 Uncharacterised protein family UPF0312/YceI PF552_10115 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PF552_10125 IPR033248 Transketolase, C-terminal domain PF552_10125 IPR029061 Thiamin diphosphate-binding fold PF552_10125 IPR005475 Transketolase-like, pyrimidine-binding domain PF552_10125 IPR020826 Transketolase binding site PF552_10125 IPR005478 Transketolase, bacterial-like PF552_10125 IPR033247 Transketolase family PF552_10125 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PF552_10125 IPR005474 Transketolase, N-terminal PF552_10130 IPR022636 S-adenosylmethionine synthetase superfamily PF552_10130 IPR002133 S-adenosylmethionine synthetase PF552_10130 IPR022628 S-adenosylmethionine synthetase, N-terminal PF552_10130 IPR022629 S-adenosylmethionine synthetase, central domain PF552_10130 IPR022630 S-adenosylmethionine synthetase, C-terminal PF552_10130 IPR022631 S-adenosylmethionine synthetase, conserved site PF552_10150 IPR001460 Penicillin-binding protein, transpeptidase PF552_10150 IPR012338 Beta-lactamase/transpeptidase-like PF552_10155 IPR016181 Acyl-CoA N-acyltransferase PF552_10155 IPR000182 GNAT domain PF552_10165 IPR012337 Ribonuclease H-like superfamily PF552_10165 IPR036397 Ribonuclease H superfamily PF552_10165 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site PF552_10165 IPR002176 Crossover junction endodeoxyribonuclease RuvC PF552_10170 IPR029056 Ribokinase-like PF552_10170 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr PF552_10170 IPR036652 YjeF N-terminal domain superfamily PF552_10170 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase PF552_10170 IPR004443 YjeF N-terminal domain PF552_10175 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PF552_10175 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PF552_10175 IPR013542 Domain of unknown function DUF1730 PF552_10175 IPR009051 Alpha-helical ferredoxin PF552_10175 IPR004453 Epoxyqueuosine reductase QueG PF552_10180 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB PF552_10180 IPR010722 Biotin and thiamin synthesis-associated domain PF552_10180 IPR024177 Biotin synthase PF552_10180 IPR006638 Elp3/MiaB/NifB PF552_10180 IPR007197 Radical SAM PF552_10180 IPR013785 Aldolase-type TIM barrel PF552_10195 IPR008966 Adhesion domain superfamily PF552_10195 IPR036937 Fimbrial-type adhesion domain superfamily PF552_10195 IPR039458 FimA-like PF552_10200 IPR016148 Pili assembly chaperone, C-terminal PF552_10200 IPR018046 Pili assembly chaperone, conserved site PF552_10200 IPR008962 PapD-like superfamily PF552_10200 IPR036316 Pili assembly chaperone, C-terminal domain superfamily PF552_10200 IPR001829 Pili assembly chaperone, bacterial PF552_10200 IPR016147 Pili assembly chaperone, N-terminal PF552_10200 IPR013783 Immunoglobulin-like fold PF552_10205 IPR025949 PapC-like, C-terminal domain PF552_10205 IPR025885 PapC, N-terminal domain PF552_10205 IPR037224 PapC, N-terminal domain superfamily PF552_10205 IPR042186 Outer membrane usher protein FimD, plug domain PF552_10205 IPR000015 Outer membrane usher protein PF552_10205 IPR018030 Fimbrial membrane usher, conserved site PF552_10225 IPR000620 EamA domain PF552_10235 IPR026030 Purine-cytosine permease Fcy2/21/22 PF552_10235 IPR001248 Purine-cytosine permease PF552_10235 IPR038271 Purine-cytosine permease superfamily PF552_10245 IPR005119 LysR, substrate-binding PF552_10245 IPR036390 Winged helix DNA-binding domain superfamily PF552_10245 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10245 IPR000847 Transcription regulator HTH, LysR PF552_10265 IPR009057 Homeobox-like domain superfamily PF552_10265 IPR001647 DNA-binding HTH domain, TetR-type PF552_10265 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PF552_10275 IPR017856 Integrase-like, N-terminal PF552_10275 IPR002876 Transcriptional regulator TACO1-like PF552_10275 IPR026564 Transcriptional regulator TACO1-like, domain 3 PF552_10275 IPR029072 YebC-like PF552_10280 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10280 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PF552_10280 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PF552_10280 IPR019888 Transcription regulator AsnC-type PF552_10280 IPR011008 Dimeric alpha-beta barrel PF552_10280 IPR036390 Winged helix DNA-binding domain superfamily PF552_10280 IPR000485 AsnC-type HTH domain PF552_10280 IPR011991 ArsR-like helix-turn-helix domain PF552_10290 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_10290 IPR003593 AAA+ ATPase domain PF552_10290 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type PF552_10290 IPR017871 ABC transporter, conserved site PF552_10290 IPR003439 ABC transporter-like PF552_10295 IPR035906 MetI-like superfamily PF552_10295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_10295 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM PF552_10295 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain PF552_10300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_10300 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain PF552_10300 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ PF552_10300 IPR035906 MetI-like superfamily PF552_10315 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PF552_10315 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_10315 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_10315 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_10315 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_10325 IPR011251 Luciferase-like domain PF552_10325 IPR036661 Luciferase-like domain superfamily PF552_10325 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A PF552_10330 IPR004872 Lipoprotein NlpA family PF552_10335 IPR004872 Lipoprotein NlpA family PF552_10340 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_10340 IPR018449 NIL domain PF552_10340 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain PF552_10340 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal PF552_10340 IPR017871 ABC transporter, conserved site PF552_10340 IPR003439 ABC transporter-like PF552_10340 IPR026253 Methionine import ATP-binding protein MetN PF552_10340 IPR003593 AAA+ ATPase domain PF552_10345 IPR035906 MetI-like superfamily PF552_10345 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_10350 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 PF552_10350 IPR041706 YchF, N-terminal PF552_10350 IPR012675 Beta-grasp domain superfamily PF552_10350 IPR013029 YchF, C-terminal domain PF552_10350 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_10350 IPR012676 TGS-like PF552_10350 IPR004095 TGS PF552_10350 IPR006073 GTP binding domain PF552_10350 IPR031167 OBG-type guanine nucleotide-binding (G) domain PF552_10350 IPR023192 TGS-like domain superfamily PF552_10375 IPR011606 Branched-chain amino acid transport, permease PF552_10380 IPR008407 Branched-chain amino acid transport, AzlD PF552_10390 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PF552_10390 IPR011761 ATP-grasp fold PF552_10390 IPR013815 ATP-grasp fold, subdomain 1 PF552_10390 IPR011054 Rudiment single hybrid motif PF552_10390 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase PF552_10390 IPR016185 Pre-ATP-grasp domain superfamily PF552_10395 IPR003607 HD/PDEase domain PF552_10395 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme PF552_10395 IPR002912 ACT domain PF552_10395 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase PF552_10395 IPR002934 Polymerase, nucleotidyl transferase domain PF552_10395 IPR006674 HD domain PF552_10400 IPR004839 Aminotransferase, class I/classII PF552_10400 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ PF552_10400 IPR015424 Pyridoxal phosphate-dependent transferase PF552_10400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_10400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_10410 IPR020449 Transcription regulator HTH, AraC- type PF552_10410 IPR014710 RmlC-like jelly roll fold PF552_10410 IPR018060 DNA binding HTH domain, AraC-type PF552_10410 IPR011051 RmlC-like cupin domain superfamily PF552_10410 IPR032783 AraC-type transcription regulator, ligand-binding domain PF552_10410 IPR009057 Homeobox-like domain superfamily PF552_10415 IPR000889 Glutathione peroxidase PF552_10415 IPR029759 Glutathione peroxidase active site PF552_10415 IPR029760 Glutathione peroxidase conserved site PF552_10415 IPR036249 Thioredoxin-like superfamily PF552_10420 IPR028427 Peptide methionine sulfoxide reductase PF552_10420 IPR002579 Peptide methionine sulphoxide reductase MrsB PF552_10420 IPR011057 Mss4-like superfamily PF552_10425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_10425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_10425 IPR015424 Pyridoxal phosphate-dependent transferase PF552_10425 IPR004839 Aminotransferase, class I/classII PF552_10430 IPR018107 Sodium:dicarboxylate symporter, conserved site PF552_10430 IPR001991 Sodium:dicarboxylate symporter PF552_10430 IPR036458 Sodium:dicarboxylate symporter superfamily PF552_10430 IPR033380 Glutamate-aspartate symport protein GltP/GltT PF552_10430 IPR034703 Proton/glutamate-aspartate symporter GltP PF552_10435 IPR037152 L-asparaginase, N-terminal domain superfamily PF552_10435 IPR027474 L-asparaginase, N-terminal PF552_10435 IPR027473 L-asparaginase, C-terminal PF552_10435 IPR040919 Asparaginase/glutaminase, C-terminal PF552_10435 IPR027475 Asparaginase/glutaminase, active site 2 PF552_10435 IPR020827 Asparaginase/glutaminase, active site 1 PF552_10435 IPR006034 Asparaginase/glutaminase-like PF552_10435 IPR036152 Asparaginase/glutaminase-like superfamily PF552_10435 IPR004550 L-asparaginase, type II PF552_10440 IPR016195 Polymerase/histidinol phosphatase-like PF552_10440 IPR003141 Polymerase/histidinol phosphatase, N-terminal PF552_10440 IPR004805 DNA polymerase III, alpha subunit PF552_10440 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PF552_10440 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain PF552_10440 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain PF552_10440 IPR004013 PHP domain PF552_10440 IPR040982 DNA polymerase III alpha subunit finger domain PF552_10440 IPR029460 DNA polymerase, helix-hairpin-helix motif PF552_10445 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PF552_10445 IPR001537 tRNA/rRNA methyltransferase, SpoU type PF552_10445 IPR029028 Alpha/beta knot methyltransferases PF552_10445 IPR004384 RNA methyltransferase TrmJ/LasT PF552_10450 IPR011004 Trimeric LpxA-like superfamily PF552_10450 IPR042122 Serine acetyltransferase, N-terminal domain superfamily PF552_10450 IPR018357 Hexapeptide transferase, conserved site PF552_10450 IPR001451 Hexapeptide repeat PF552_10450 IPR005881 Serine O-acetyltransferase PF552_10465 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_10465 IPR023753 FAD/NAD(P)-binding domain PF552_10465 IPR002109 Glutaredoxin PF552_10465 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PF552_10465 IPR012336 Thioredoxin-like fold PF552_10465 IPR036249 Thioredoxin-like superfamily PF552_10465 IPR012081 Alkyl hydroperoxide reductase subunit F PF552_10480 IPR000847 Transcription regulator HTH, LysR PF552_10480 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10480 IPR005119 LysR, substrate-binding PF552_10480 IPR036390 Winged helix DNA-binding domain superfamily PF552_10485 IPR038770 Sodium/solute symporter superfamily PF552_10485 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 PF552_10485 IPR004706 Arsenical-resistance protein Acr3 PF552_10490 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10490 IPR001845 HTH ArsR-type DNA-binding domain PF552_10490 IPR011991 ArsR-like helix-turn-helix domain PF552_10490 IPR036390 Winged helix DNA-binding domain superfamily PF552_10495 IPR006659 Arsenate reductase PF552_10495 IPR036249 Thioredoxin-like superfamily PF552_10495 IPR006660 Arsenate reductase-like PF552_10505 IPR026912 Adenine deaminase C-terminal domain PF552_10505 IPR006679 Adenine deaminase PF552_10505 IPR032466 Metal-dependent hydrolase PF552_10505 IPR011059 Metal-dependent hydrolase, composite domain superfamily PF552_10505 IPR006680 Amidohydrolase-related PF552_10515 IPR005119 LysR, substrate-binding PF552_10515 IPR000847 Transcription regulator HTH, LysR PF552_10515 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10515 IPR036390 Winged helix DNA-binding domain superfamily PF552_10525 IPR012681 Nucleobase cation symporter-1, NCS1 PF552_10525 IPR038271 Purine-cytosine permease superfamily PF552_10525 IPR001248 Purine-cytosine permease PF552_10530 IPR015942 Asp/Glu/hydantoin racemase PF552_10535 IPR006189 CHASE domain PF552_10535 IPR042098 Taurine dioxygenase TauD-like superfamily PF552_10535 IPR003819 TauD/TfdA-like domain PF552_10540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_10540 IPR035906 MetI-like superfamily PF552_10545 IPR003439 ABC transporter-like PF552_10545 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_10545 IPR003593 AAA+ ATPase domain PF552_10545 IPR017871 ABC transporter, conserved site PF552_10545 IPR015859 ABC transporter, taurine import, TauD PF552_10550 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain PF552_10550 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PF552_10550 IPR010068 Taurine ABC transporter, substrate-binding protein TauA PF552_10560 IPR020846 Major facilitator superfamily domain PF552_10560 IPR005828 Major facilitator, sugar transporter-like PF552_10560 IPR036259 MFS transporter superfamily PF552_10560 IPR005829 Sugar transporter, conserved site PF552_10565 IPR036661 Luciferase-like domain superfamily PF552_10565 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A PF552_10565 IPR011251 Luciferase-like domain PF552_10580 IPR002585 Cytochrome ubiquinol oxidase subunit 1 PF552_10585 IPR003317 Cytochrome ubiquinol oxidase subunit 2 PF552_10595 IPR004839 Aminotransferase, class I/classII PF552_10595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_10595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_10595 IPR000524 Transcription regulator HTH, GntR PF552_10595 IPR015424 Pyridoxal phosphate-dependent transferase PF552_10595 IPR036390 Winged helix DNA-binding domain superfamily PF552_10595 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10600 IPR000847 Transcription regulator HTH, LysR PF552_10600 IPR005119 LysR, substrate-binding PF552_10600 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain PF552_10600 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10600 IPR036390 Winged helix DNA-binding domain superfamily PF552_10615 IPR001227 Acyl transferase domain superfamily PF552_10615 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type PF552_10615 IPR024925 Malonyl CoA-acyl carrier protein transacylase PF552_10615 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PF552_10615 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PF552_10615 IPR014043 Acyl transferase PF552_10620 IPR017557 Phosphoribosyl-dephospho-CoA transferase PF552_10625 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal PF552_10625 IPR029045 ClpP/crotonase-like domain superfamily PF552_10625 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit PF552_10630 IPR034733 Acetyl-CoA carboxylase PF552_10630 IPR029045 ClpP/crotonase-like domain superfamily PF552_10630 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal PF552_10630 IPR017556 Biotin-independent malonate decarboxylase, beta subunit PF552_10635 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein PF552_10635 IPR009662 Malonate decarboxylase delta subunit PF552_10640 IPR017555 Triphosphoribosyl-dephospho-CoA synthase PF552_10640 IPR002736 Triphosphoribosyl-dephospho-CoA protein PF552_10645 IPR037171 NagB/RpiA transferase-like PF552_10645 IPR005777 Acetyl-S-ACP:malonate ACP transferase PF552_10650 IPR005119 LysR, substrate-binding PF552_10650 IPR000847 Transcription regulator HTH, LysR PF552_10650 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10650 IPR036390 Winged helix DNA-binding domain superfamily PF552_10660 IPR011701 Major facilitator superfamily PF552_10660 IPR036259 MFS transporter superfamily PF552_10660 IPR020846 Major facilitator superfamily domain PF552_10675 IPR015424 Pyridoxal phosphate-dependent transferase PF552_10675 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_10675 IPR000524 Transcription regulator HTH, GntR PF552_10675 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10675 IPR036390 Winged helix DNA-binding domain superfamily PF552_10675 IPR004839 Aminotransferase, class I/classII PF552_10680 IPR007300 CidB/LrgB family PF552_10680 IPR005261 Conserved hypothetical protein CHP00659 PF552_10685 IPR023760 Holin-like protein CidA PF552_10685 IPR005538 LrgA/CidA family PF552_10690 IPR005119 LysR, substrate-binding PF552_10690 IPR000847 Transcription regulator HTH, LysR PF552_10690 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10690 IPR036390 Winged helix DNA-binding domain superfamily PF552_10695 IPR010987 Glutathione S-transferase, C-terminal-like PF552_10695 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PF552_10695 IPR040079 Glutathione Transferase family PF552_10695 IPR004045 Glutathione S-transferase, N-terminal PF552_10695 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal PF552_10695 IPR036249 Thioredoxin-like superfamily PF552_10700 IPR010987 Glutathione S-transferase, C-terminal-like PF552_10700 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PF552_10700 IPR040079 Glutathione Transferase family PF552_10700 IPR004045 Glutathione S-transferase, N-terminal PF552_10700 IPR036249 Thioredoxin-like superfamily PF552_10705 IPR036390 Winged helix DNA-binding domain superfamily PF552_10705 IPR000847 Transcription regulator HTH, LysR PF552_10705 IPR005119 LysR, substrate-binding PF552_10705 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10710 IPR036291 NAD(P)-binding domain superfamily PF552_10710 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_10710 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PF552_10715 IPR036873 Rhodanese-like domain superfamily PF552_10715 IPR023695 Thiosulfate sulfurtransferase, bacterial PF552_10715 IPR001763 Rhodanese-like domain PF552_10720 IPR001451 Hexapeptide repeat PF552_10720 IPR011004 Trimeric LpxA-like superfamily PF552_10720 IPR042122 Serine acetyltransferase, N-terminal domain superfamily PF552_10730 IPR010970 Cysteine desulfurase, SufS PF552_10730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_10730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_10730 IPR000192 Aminotransferase class V domain PF552_10730 IPR015424 Pyridoxal phosphate-dependent transferase PF552_10740 IPR004778 Homoserine/Threonine efflux protein PF552_10740 IPR001123 Amino acid exporter protein, LeuE-type PF552_10745 IPR000847 Transcription regulator HTH, LysR PF552_10745 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10745 IPR036390 Winged helix DNA-binding domain superfamily PF552_10745 IPR005119 LysR, substrate-binding PF552_10755 IPR001320 Ionotropic glutamate receptor PF552_10755 IPR018313 Solute-binding protein family 3, conserved site PF552_10755 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PF552_10760 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PF552_10760 IPR018313 Solute-binding protein family 3, conserved site PF552_10765 IPR017871 ABC transporter, conserved site PF552_10765 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_10765 IPR003593 AAA+ ATPase domain PF552_10765 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type PF552_10765 IPR003439 ABC transporter-like PF552_10770 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain PF552_10770 IPR035906 MetI-like superfamily PF552_10770 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_10775 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_10775 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain PF552_10775 IPR035906 MetI-like superfamily PF552_10790 IPR011006 CheY-like superfamily PF552_10790 IPR003607 HD/PDEase domain PF552_10790 IPR037522 HD-GYP domain PF552_10790 IPR001789 Signal transduction response regulator, receiver domain PF552_10795 IPR011006 CheY-like superfamily PF552_10795 IPR003594 Histidine kinase/HSP90-like ATPase PF552_10795 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_10795 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_10795 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_10795 IPR015387 LuxQ, periplasmic PF552_10795 IPR035965 PAS domain superfamily PF552_10795 IPR029151 Periplasmic sensor-like domain superfamily PF552_10795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_10795 IPR001789 Signal transduction response regulator, receiver domain PF552_10795 IPR005467 Histidine kinase domain PF552_10805 IPR036390 Winged helix DNA-binding domain superfamily PF552_10805 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10805 IPR019888 Transcription regulator AsnC-type PF552_10805 IPR000485 AsnC-type HTH domain PF552_10805 IPR011008 Dimeric alpha-beta barrel PF552_10805 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PF552_10805 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PF552_10805 IPR011991 ArsR-like helix-turn-helix domain PF552_10815 IPR015927 Peptidase S24/S26A/S26B/S26C PF552_10815 IPR036286 LexA/Signal peptidase-like superfamily PF552_10815 IPR039418 LexA-like PF552_10815 IPR006197 Peptidase S24, LexA-like PF552_10835 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_10835 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_10835 IPR036291 NAD(P)-binding domain superfamily PF552_10840 IPR002226 Catalase haem-binding site PF552_10840 IPR010582 Catalase immune-responsive domain PF552_10840 IPR041399 Large catalase, C-terminal domain PF552_10840 IPR037060 Catalase core domain superfamily PF552_10840 IPR011614 Catalase core domain PF552_10840 IPR020835 Catalase superfamily PF552_10840 IPR018028 Catalase, mono-functional, haem-containing PF552_10840 IPR024708 Catalase active site PF552_10840 IPR024712 Catalase, mono-functional, haem-containing, clade 2 PF552_10840 IPR029062 Class I glutamine amidotransferase-like PF552_10850 IPR001453 MoaB/Mog domain PF552_10850 IPR036425 MoaB/Mog-like domain superfamily PF552_10850 IPR036653 CinA-like, C-terminal PF552_10850 IPR008136 CinA, C-terminal PF552_10850 IPR041424 CinA, KH domain PF552_10850 IPR008135 Competence-induced protein CinA PF552_10885 IPR005119 LysR, substrate-binding PF552_10885 IPR000847 Transcription regulator HTH, LysR PF552_10885 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10885 IPR036390 Winged helix DNA-binding domain superfamily PF552_10905 IPR025110 AMP-binding enzyme, C-terminal domain PF552_10905 IPR020845 AMP-binding, conserved site PF552_10905 IPR000873 AMP-dependent synthetase/ligase PF552_10910 IPR001647 DNA-binding HTH domain, TetR-type PF552_10910 IPR009057 Homeobox-like domain superfamily PF552_10915 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_10915 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_10915 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_10915 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_10915 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_10915 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_10915 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_10920 IPR029045 ClpP/crotonase-like domain superfamily PF552_10920 IPR034733 Acetyl-CoA carboxylase PF552_10920 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal PF552_10920 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal PF552_10925 IPR029045 ClpP/crotonase-like domain superfamily PF552_10925 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PF552_10925 IPR001753 Enoyl-CoA hydratase/isomerase PF552_10925 IPR014748 Enoyl-CoA hydratase, C-terminal PF552_10930 IPR005482 Biotin carboxylase, C-terminal PF552_10930 IPR011761 ATP-grasp fold PF552_10930 IPR013815 ATP-grasp fold, subdomain 1 PF552_10930 IPR016185 Pre-ATP-grasp domain superfamily PF552_10930 IPR001882 Biotin-binding site PF552_10930 IPR041265 Propionyl-coenzyme A carboxylase, BT domain PF552_10930 IPR000089 Biotin/lipoyl attachment PF552_10930 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PF552_10930 IPR011053 Single hybrid motif PF552_10930 IPR011054 Rudiment single hybrid motif PF552_10930 IPR005481 Biotin carboxylase-like, N-terminal domain PF552_10930 IPR011764 Biotin carboxylation domain PF552_10935 IPR000891 Pyruvate carboxyltransferase PF552_10935 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site PF552_10935 IPR027167 Hydroxymethylglutaryl-CoA lyase PF552_10935 IPR013785 Aldolase-type TIM barrel PF552_10940 IPR036390 Winged helix DNA-binding domain superfamily PF552_10940 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10940 IPR000847 Transcription regulator HTH, LysR PF552_10940 IPR005119 LysR, substrate-binding PF552_10955 IPR001123 Amino acid exporter protein, LeuE-type PF552_10960 IPR041492 Haloacid dehalogenase-like hydrolase PF552_10960 IPR006323 Phosphonoacetaldehyde hydrolase PF552_10960 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PF552_10960 IPR023214 HAD superfamily PF552_10960 IPR006439 HAD hydrolase, subfamily IA PF552_10960 IPR036412 HAD-like superfamily PF552_10965 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase PF552_10965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_10965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_10965 IPR015424 Pyridoxal phosphate-dependent transferase PF552_10965 IPR012703 2-aminoethylphosphonate--pyruvate transaminase PF552_10965 IPR000192 Aminotransferase class V domain PF552_10970 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_10970 IPR006076 FAD dependent oxidoreductase PF552_10970 IPR006281 Sarcosine oxidase, monomeric PF552_10975 IPR035906 MetI-like superfamily PF552_10975 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_10980 IPR003593 AAA+ ATPase domain PF552_10980 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal PF552_10980 IPR003439 ABC transporter-like PF552_10980 IPR017871 ABC transporter, conserved site PF552_10980 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_10980 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 PF552_10980 IPR013611 Transport-associated OB, type 2 PF552_10980 IPR008995 Molybdate/tungstate binding, C-terminal PF552_10985 IPR026045 Ferric binding protein PF552_10990 IPR036390 Winged helix DNA-binding domain superfamily PF552_10990 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_10990 IPR011663 UbiC transcription regulator-associated PF552_10990 IPR017722 Phosphonate utilization transcriptional regulator PhnR PF552_10990 IPR000524 Transcription regulator HTH, GntR PF552_10990 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PF552_10995 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site PF552_10995 IPR001608 Alanine racemase, N-terminal PF552_10995 IPR011079 Alanine racemase, C-terminal PF552_10995 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PF552_10995 IPR000821 Alanine racemase PF552_10995 IPR029066 PLP-binding barrel PF552_11000 IPR012733 4-hydroxybenzoate 3-monooxygenase PF552_11000 IPR002938 FAD-binding domain PF552_11000 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_11005 IPR005471 Transcription regulator IclR, N-terminal PF552_11005 IPR036390 Winged helix DNA-binding domain superfamily PF552_11005 IPR029016 GAF-like domain superfamily PF552_11005 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR PF552_11005 IPR014757 Transcription regulator IclR, C-terminal PF552_11005 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_11010 IPR023048 NADH-azoreductase, FMN-dependent PF552_11010 IPR029039 Flavoprotein-like superfamily PF552_11010 IPR003680 Flavodoxin-like fold PF552_11015 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_11015 IPR000847 Transcription regulator HTH, LysR PF552_11015 IPR036390 Winged helix DNA-binding domain superfamily PF552_11015 IPR005119 LysR, substrate-binding PF552_11020 IPR029032 AhpD-like PF552_11020 IPR003779 Carboxymuconolactone decarboxylase-like PF552_11020 IPR012788 4-carboxymuconolactone decarboxylase PF552_11025 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_11025 IPR010102 Succinate semialdehyde dehydrogenase PF552_11025 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_11025 IPR015590 Aldehyde dehydrogenase domain PF552_11025 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_11025 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_11025 IPR016161 Aldehyde/histidinol dehydrogenase PF552_11035 IPR001248 Purine-cytosine permease PF552_11035 IPR026030 Purine-cytosine permease Fcy2/21/22 PF552_11035 IPR038271 Purine-cytosine permease superfamily PF552_11045 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_11045 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_11045 IPR015590 Aldehyde dehydrogenase domain PF552_11045 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_11045 IPR016161 Aldehyde/histidinol dehydrogenase PF552_11045 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_11050 IPR011251 Luciferase-like domain PF552_11050 IPR036661 Luciferase-like domain superfamily PF552_11055 IPR012349 FMN-binding split barrel PF552_11055 IPR002563 Flavin reductase like domain PF552_11060 IPR000073 Alpha/beta hydrolase fold-1 PF552_11060 IPR029058 Alpha/Beta hydrolase fold PF552_11080 IPR016174 Di-haem cytochrome, transmembrane PF552_11080 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase PF552_11085 IPR018028 Catalase, mono-functional, haem-containing PF552_11085 IPR011614 Catalase core domain PF552_11085 IPR020835 Catalase superfamily PF552_11085 IPR024168 Catalase, SrpA-type, predicted PF552_11090 IPR011701 Major facilitator superfamily PF552_11090 IPR036259 MFS transporter superfamily PF552_11090 IPR020846 Major facilitator superfamily domain PF552_11095 IPR000891 Pyruvate carboxyltransferase PF552_11095 IPR013785 Aldolase-type TIM barrel PF552_11100 IPR003673 CoA-transferase family III PF552_11100 IPR023606 CoA-transferase family III domain superfamily PF552_11120 IPR032874 DDE domain PF552_11120 IPR001584 Integrase, catalytic core PF552_11120 IPR012337 Ribonuclease H-like superfamily PF552_11120 IPR036397 Ribonuclease H superfamily PF552_11130 IPR013762 Integrase-like, catalytic domain superfamily PF552_11130 IPR010998 Integrase/recombinase, N-terminal PF552_11130 IPR011010 DNA breaking-rejoining enzyme, catalytic core PF552_11130 IPR002104 Integrase, catalytic domain PF552_11130 IPR011946 Integrase, integron-type PF552_11130 IPR004107 Integrase, SAM-like, N-terminal PF552_11135 IPR019646 Aminoglycoside-2''-adenylyltransferase PF552_11145 IPR000390 Small multidrug resistance protein family PF552_11150 IPR000489 Pterin-binding domain PF552_11150 IPR011005 Dihydropteroate synthase-like PF552_11150 IPR006390 Dihydropteroate synthase PF552_11155 IPR016181 Acyl-CoA N-acyltransferase PF552_11160 IPR003593 AAA+ ATPase domain PF552_11160 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein PF552_11160 IPR001270 ClpA/B family PF552_11160 IPR002611 IstB-like ATP-binding protein PF552_11160 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_11175 IPR032874 DDE domain PF552_11175 IPR036397 Ribonuclease H superfamily PF552_11175 IPR012337 Ribonuclease H-like superfamily PF552_11175 IPR001584 Integrase, catalytic core PF552_11185 IPR009594 Transcription regulator HTH, AraC, N-terminal PF552_11185 IPR009057 Homeobox-like domain superfamily PF552_11185 IPR018060 DNA binding HTH domain, AraC-type PF552_11195 IPR011129 Cold shock domain PF552_11195 IPR012340 Nucleic acid-binding, OB-fold PF552_11195 IPR002059 Cold-shock protein, DNA-binding PF552_11195 IPR012156 Cold shock, CspA PF552_11230 IPR041471 UvrB, interaction domain PF552_11230 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_11230 IPR001943 UVR domain PF552_11230 IPR004807 UvrABC system, subunit B PF552_11230 IPR006935 Helicase/UvrB, N-terminal PF552_11230 IPR001650 Helicase, C-terminal PF552_11230 IPR036876 UVR domain superfamily PF552_11230 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_11230 IPR024759 UvrB, YAD/RRR-motif-containing domain PF552_11240 IPR006683 Thioesterase domain PF552_11240 IPR003736 Phenylacetic acid degradation-related domain PF552_11240 IPR029069 HotDog domain superfamily PF552_11240 IPR011973 Phenylacetic acid degradation protein PaaD PF552_11245 IPR011004 Trimeric LpxA-like superfamily PF552_11245 IPR001451 Hexapeptide repeat PF552_11245 IPR023446 Carnitine operon protein CaiE PF552_11250 IPR012906 PaaX-like, N-terminal PF552_11250 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX PF552_11250 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_11250 IPR013225 PaaX-like, C-terminal PF552_11255 IPR028154 AMP-dependent ligase, C-terminal PF552_11255 IPR000873 AMP-dependent synthetase/ligase PF552_11255 IPR042099 AMP-dependent synthetase-like superfamily PF552_11255 IPR011880 Phenylacetate-CoA ligase PF552_11260 IPR020616 Thiolase, N-terminal PF552_11260 IPR020617 Thiolase, C-terminal PF552_11260 IPR012793 Beta-ketoadipyl CoA thiolase PF552_11260 IPR002155 Thiolase PF552_11260 IPR020610 Thiolase, active site PF552_11260 IPR020613 Thiolase, conserved site PF552_11260 IPR020615 Thiolase, acyl-enzyme intermediate active site PF552_11260 IPR016039 Thiolase-like PF552_11265 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site PF552_11265 IPR036291 NAD(P)-binding domain superfamily PF552_11265 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PF552_11265 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC PF552_11265 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_11265 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain PF552_11265 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PF552_11270 IPR014748 Enoyl-CoA hydratase, C-terminal PF552_11270 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB PF552_11270 IPR001753 Enoyl-CoA hydratase/isomerase PF552_11270 IPR029045 ClpP/crotonase-like domain superfamily PF552_11275 IPR029045 ClpP/crotonase-like domain superfamily PF552_11275 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PF552_11275 IPR001753 Enoyl-CoA hydratase/isomerase PF552_11275 IPR014748 Enoyl-CoA hydratase, C-terminal PF552_11280 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PF552_11280 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PF552_11280 IPR036010 2Fe-2S ferredoxin-like superfamily PF552_11280 IPR012675 Beta-grasp domain superfamily PF552_11280 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PF552_11280 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_11280 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PF552_11280 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_11280 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_11280 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit PF552_11280 IPR017938 Riboflavin synthase-like beta-barrel PF552_11285 IPR034904 Fe-S cluster assembly domain superfamily PF552_11285 IPR002744 MIP18 family-like PF552_11285 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit PF552_11290 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C PF552_11290 IPR012347 Ferritin-like PF552_11290 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C PF552_11290 IPR009078 Ferritin-like superfamily PF552_11295 IPR038693 Phenylacetyl-CoA epoxidase, subunit B PF552_11295 IPR009359 Phenylacetic acid degradation B PF552_11300 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A PF552_11300 IPR009078 Ferritin-like superfamily PF552_11300 IPR012347 Ferritin-like PF552_11300 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C PF552_11305 IPR011966 Phenylacetic acid degradation protein PaaN PF552_11305 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_11305 IPR002539 MaoC-like dehydratase domain PF552_11305 IPR029069 HotDog domain superfamily PF552_11305 IPR015590 Aldehyde dehydrogenase domain PF552_11305 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_11305 IPR016161 Aldehyde/histidinol dehydrogenase PF552_11310 IPR029009 Allosteric substrate binding domain superfamily PF552_11310 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form PF552_11310 IPR005131 Serine dehydratase beta chain PF552_11310 IPR005130 Serine dehydratase-like, alpha subunit PF552_11315 IPR002293 Amino acid/polyamine transporter I PF552_11320 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_11320 IPR015590 Aldehyde dehydrogenase domain PF552_11320 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_11320 IPR016161 Aldehyde/histidinol dehydrogenase PF552_11325 IPR036259 MFS transporter superfamily PF552_11325 IPR020846 Major facilitator superfamily domain PF552_11325 IPR005829 Sugar transporter, conserved site PF552_11325 IPR005828 Major facilitator, sugar transporter-like PF552_11335 IPR023753 FAD/NAD(P)-binding domain PF552_11335 IPR007419 BFD-like [2Fe-2S]-binding domain PF552_11335 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily PF552_11335 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_11335 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B PF552_11345 IPR023080 D-amino acid dehydrogenase DadA PF552_11345 IPR006076 FAD dependent oxidoreductase PF552_11345 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_11350 IPR008794 Proline racemase family PF552_11355 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_11355 IPR008920 Transcription regulator FadR/GntR, C-terminal PF552_11355 IPR036390 Winged helix DNA-binding domain superfamily PF552_11355 IPR000524 Transcription regulator HTH, GntR PF552_11365 IPR020624 Schiff base-forming aldolase, conserved site PF552_11365 IPR020625 Schiff base-forming aldolase, active site PF552_11365 IPR002220 DapA-like PF552_11365 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA PF552_11365 IPR013785 Aldolase-type TIM barrel PF552_11375 IPR015358 Transcription regulator MerR, DNA binding PF552_11375 IPR010211 Redox-sensitive transcriptional activator SoxR PF552_11375 IPR000551 MerR-type HTH domain PF552_11375 IPR009061 Putative DNA-binding domain superfamily PF552_11385 IPR003828 Epoxyqueuosine reductase QueH PF552_11400 IPR004747 Cyanate transport system protein PF552_11400 IPR011701 Major facilitator superfamily PF552_11400 IPR020846 Major facilitator superfamily domain PF552_11400 IPR036259 MFS transporter superfamily PF552_11405 IPR016192 APOBEC/CMP deaminase, zinc-binding PF552_11405 IPR002125 Cytidine and deoxycytidylate deaminase domain PF552_11405 IPR016193 Cytidine deaminase-like PF552_11415 IPR000847 Transcription regulator HTH, LysR PF552_11415 IPR036390 Winged helix DNA-binding domain superfamily PF552_11415 IPR005119 LysR, substrate-binding PF552_11415 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain PF552_11415 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_11435 IPR010263 Type VI secretion protein, VC_A0114 PF552_11440 IPR010657 ImpA, N-terminal PF552_11440 IPR017740 Type VI secretion system-associated, ImpA PF552_11445 IPR041546 ClpA/ClpB, AAA lid domain PF552_11445 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_11445 IPR018368 ClpA/B, conserved site 1 PF552_11445 IPR004176 Clp, N-terminal PF552_11445 IPR001270 ClpA/B family PF552_11445 IPR019489 Clp ATPase, C-terminal PF552_11445 IPR017729 Type VI secretion system, ATPase ClpV1 PF552_11445 IPR003959 ATPase, AAA-type, core PF552_11445 IPR003593 AAA+ ATPase domain PF552_11445 IPR036628 Clp, N-terminal domain superfamily PF552_11455 IPR000498 Outer membrane protein OmpA-like, transmembrane domain PF552_11455 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PF552_11455 IPR006664 Outer membrane protein, bacterial PF552_11455 IPR002368 Outer membrane protein, OmpA PF552_11455 IPR006665 OmpA-like domain PF552_11455 IPR006690 Outer membrane protein, OmpA-like, conserved site PF552_11455 IPR036737 OmpA-like domain superfamily PF552_11465 IPR017731 Type VI secretion system, IcmF PF552_11465 IPR010623 Type VI secretion system IcmF, C-terminal PF552_11465 IPR025743 IcmF-related, N-terminal domain PF552_11465 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_11465 IPR009612 IcmF-related PF552_11480 IPR010272 Type VI secretion system, TssF-like PF552_11495 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PF552_11520 IPR003593 AAA+ ATPase domain PF552_11520 IPR003439 ABC transporter-like PF552_11520 IPR017871 ABC transporter, conserved site PF552_11520 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_11525 IPR018313 Solute-binding protein family 3, conserved site PF552_11525 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PF552_11525 IPR001320 Ionotropic glutamate receptor PF552_11530 IPR036928 Amidase signature (AS) superfamily PF552_11530 IPR014085 Allophanate hydrolase PF552_11530 IPR023631 Amidase signature domain PF552_11535 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal PF552_11535 IPR013321 Arc-type ribbon-helix-helix PF552_11535 IPR002145 Ribbon-helix-helix protein, CopG PF552_11535 IPR022988 Nickel-responsive transcriptional regulator NikR PF552_11535 IPR010985 Ribbon-helix-helix PF552_11535 IPR014864 Transcription factor, NikR, nickel binding C-terminal PF552_11545 IPR036390 Winged helix DNA-binding domain superfamily PF552_11545 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_11545 IPR002577 Helix-turn-helix, HxlR type PF552_11550 IPR003680 Flavodoxin-like fold PF552_11550 IPR029039 Flavoprotein-like superfamily PF552_11550 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF PF552_11555 IPR016185 Pre-ATP-grasp domain superfamily PF552_11555 IPR005482 Biotin carboxylase, C-terminal PF552_11555 IPR011764 Biotin carboxylation domain PF552_11555 IPR005481 Biotin carboxylase-like, N-terminal domain PF552_11555 IPR011761 ATP-grasp fold PF552_11555 IPR011054 Rudiment single hybrid motif PF552_11555 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PF552_11570 IPR011032 GroES-like superfamily PF552_11570 IPR036291 NAD(P)-binding domain superfamily PF552_11570 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PF552_11570 IPR027399 Alcohol dehydrogenase GroES-associated PF552_11570 IPR013154 Alcohol dehydrogenase, N-terminal PF552_11570 IPR013149 Alcohol dehydrogenase, C-terminal PF552_11580 IPR001647 DNA-binding HTH domain, TetR-type PF552_11580 IPR009057 Homeobox-like domain superfamily PF552_11620 IPR014743 Chloride channel, core PF552_11620 IPR001807 Chloride channel, voltage gated PF552_11625 IPR005481 Biotin carboxylase-like, N-terminal domain PF552_11625 IPR011764 Biotin carboxylation domain PF552_11625 IPR005482 Biotin carboxylase, C-terminal PF552_11625 IPR000089 Biotin/lipoyl attachment PF552_11625 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PF552_11625 IPR011761 ATP-grasp fold PF552_11625 IPR016185 Pre-ATP-grasp domain superfamily PF552_11625 IPR001882 Biotin-binding site PF552_11625 IPR011054 Rudiment single hybrid motif PF552_11625 IPR011053 Single hybrid motif PF552_11635 IPR016938 Uncharacterised protein family UPF0317 PF552_11635 IPR038021 Putative hydro-lyase PF552_11635 IPR009906 D-glutamate cyclase PF552_11640 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel PF552_11640 IPR005501 LamB/YcsF/PxpA-like PF552_11645 IPR001046 NRAMP family PF552_11650 IPR036390 Winged helix DNA-binding domain superfamily PF552_11650 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_11650 IPR000847 Transcription regulator HTH, LysR PF552_11675 IPR006530 YD repeat PF552_11675 IPR001826 RHS protein PF552_11675 IPR022385 Rhs repeat-associated core PF552_11675 IPR031325 RHS repeat PF552_11680 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PF552_11680 IPR037026 Vgr protein, OB-fold domain superfamily PF552_11680 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PF552_11680 IPR006531 Gp5 N-terminal PF552_11680 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PF552_11680 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PF552_11705 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PF552_11705 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PF552_11705 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_11705 IPR026578 L-carnitine dehydrogenase PF552_11705 IPR036291 NAD(P)-binding domain superfamily PF552_11705 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PF552_11730 IPR035906 MetI-like superfamily PF552_11730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_11735 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_11735 IPR003593 AAA+ ATPase domain PF552_11735 IPR003439 ABC transporter-like PF552_11735 IPR017871 ABC transporter, conserved site PF552_11735 IPR005890 Nitrate transport ATP-binding subunit C/D PF552_11740 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PF552_11740 IPR001926 Pyridoxal-phosphate dependent enzyme PF552_11740 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase PF552_11740 IPR005966 D-cysteine desulfhydrase PF552_11745 IPR015942 Asp/Glu/hydantoin racemase PF552_11745 IPR001920 Asp/Glu racemase PF552_11745 IPR018187 Asp/Glu racemase, active site 1 PF552_11745 IPR033134 Asp/Glu racemase, active site 2 PF552_11745 IPR004380 Aspartate racemase PF552_11750 IPR005829 Sugar transporter, conserved site PF552_11750 IPR020846 Major facilitator superfamily domain PF552_11750 IPR036259 MFS transporter superfamily PF552_11750 IPR011701 Major facilitator superfamily PF552_11750 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family PF552_11770 IPR004488 Magnesium/cobalt transport protein CorA PF552_11770 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB PF552_11780 IPR004960 Bacterial lipid A biosynthesis acyltransferase PF552_11780 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase PF552_11785 IPR005330 MHYT domain PF552_11785 IPR029787 Nucleotide cyclase PF552_11785 IPR035919 EAL domain superfamily PF552_11785 IPR000160 GGDEF domain PF552_11785 IPR001633 EAL domain PF552_11790 IPR000620 EamA domain PF552_11795 IPR036390 Winged helix DNA-binding domain superfamily PF552_11795 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_11795 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PF552_11795 IPR011991 ArsR-like helix-turn-helix domain PF552_11795 IPR019888 Transcription regulator AsnC-type PF552_11795 IPR011008 Dimeric alpha-beta barrel PF552_11795 IPR000485 AsnC-type HTH domain PF552_11795 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PF552_11800 IPR007696 DNA mismatch repair protein MutS, core PF552_11800 IPR007861 DNA mismatch repair protein MutS, clamp PF552_11800 IPR036678 MutS, connector domain superfamily PF552_11800 IPR016151 DNA mismatch repair protein MutS, N-terminal PF552_11800 IPR036187 DNA mismatch repair protein MutS, core domain superfamily PF552_11800 IPR000432 DNA mismatch repair protein MutS, C-terminal PF552_11800 IPR007860 DNA mismatch repair protein MutS, connector domain PF552_11800 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_11800 IPR017261 DNA mismatch repair protein MutS/MSH PF552_11800 IPR007695 DNA mismatch repair protein MutS-like, N-terminal PF552_11800 IPR005748 DNA mismatch repair protein MutS PF552_11810 IPR022569 Ferredoxin, C-terminal PF552_11810 IPR000813 7Fe ferredoxin PF552_11810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PF552_11810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PF552_11820 IPR002935 Class I-like SAM-dependent O-methyltransferase PF552_11820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_11830 IPR011004 Trimeric LpxA-like superfamily PF552_11830 IPR018357 Hexapeptide transferase, conserved site PF552_11830 IPR001451 Hexapeptide repeat PF552_11835 IPR035647 EF-G domain III/V-like PF552_11835 IPR023582 Impact family PF552_11835 IPR001498 Impact, N-terminal PF552_11835 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_11835 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site PF552_11835 IPR036956 Impact, N-terminal domain superfamily PF552_11840 IPR010129 Type I secretion membrane fusion protein, HlyD family PF552_11840 IPR006144 Secretion protein HlyD, conserved site PF552_11845 IPR005074 Peptidase C39, bacteriocin processing PF552_11845 IPR003593 AAA+ ATPase domain PF552_11845 IPR011527 ABC transporter type 1, transmembrane domain PF552_11845 IPR036640 ABC transporter type 1, transmembrane domain superfamily PF552_11845 IPR003439 ABC transporter-like PF552_11845 IPR017871 ABC transporter, conserved site PF552_11845 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_11845 IPR005897 Peptidase C39, ABC-type bacteriocin transporter PF552_11845 IPR039421 Type I protein exporter PF552_11855 IPR030921 LPS export ABC transporter, ATP-binding protein LptB PF552_11855 IPR017871 ABC transporter, conserved site PF552_11855 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PF552_11855 IPR003593 AAA+ ATPase domain PF552_11855 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_11855 IPR003439 ABC transporter-like PF552_11860 IPR005653 Organic solvent tolerance-like, N-terminal PF552_11860 IPR014340 Lipopolysaccharide export system protein LptA PF552_11870 IPR036412 HAD-like superfamily PF552_11870 IPR023214 HAD superfamily PF552_11870 IPR010023 KdsC family PF552_11875 IPR000644 CBS domain PF552_11875 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type PF552_11875 IPR001347 Sugar isomerase (SIS) PF552_11875 IPR035474 KpsF-like, SIS domain PF552_11880 IPR032678 tRNA synthetases class I, catalytic domain PF552_11880 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PF552_11880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_11880 IPR015803 Cysteine-tRNA ligase PF552_11880 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR PF552_11880 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase PF552_11910 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_11910 IPR036390 Winged helix DNA-binding domain superfamily PF552_11910 IPR011991 ArsR-like helix-turn-helix domain PF552_11910 IPR002577 Helix-turn-helix, HxlR type PF552_11915 IPR011701 Major facilitator superfamily PF552_11915 IPR020846 Major facilitator superfamily domain PF552_11915 IPR036259 MFS transporter superfamily PF552_11940 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_11940 IPR036291 NAD(P)-binding domain superfamily PF552_11940 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PF552_11940 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain PF552_11940 IPR000304 Pyrroline-5-carboxylate reductase PF552_11950 IPR012340 Nucleic acid-binding, OB-fold PF552_11950 IPR002059 Cold-shock protein, DNA-binding PF552_11950 IPR019844 Cold-shock (CSD) domain PF552_11950 IPR011129 Cold shock domain PF552_11950 IPR012156 Cold shock, CspA PF552_11955 IPR001123 Amino acid exporter protein, LeuE-type PF552_11985 IPR020579 Exonuclease VII, large subunit, C-terminal PF552_11985 IPR025824 OB-fold nucleic acid binding domain PF552_11985 IPR003753 Exonuclease VII, large subunit PF552_12020 IPR000551 MerR-type HTH domain PF552_12020 IPR009061 Putative DNA-binding domain superfamily PF552_12020 IPR011789 Cu(I)-responsive transcriptional regulator PF552_12020 IPR015358 Transcription regulator MerR, DNA binding PF552_12025 IPR008250 P-type ATPase, A domain superfamily PF552_12025 IPR018303 P-type ATPase, phosphorylation site PF552_12025 IPR001757 P-type ATPase PF552_12025 IPR027256 P-type ATPase, subfamily IB PF552_12025 IPR036163 Heavy metal-associated domain superfamily PF552_12025 IPR006121 Heavy metal-associated domain, HMA PF552_12025 IPR006122 Heavy metal-associated domain, copper ion-binding PF552_12025 IPR023298 P-type ATPase, transmembrane domain superfamily PF552_12025 IPR017969 Heavy-metal-associated, conserved site PF552_12025 IPR023299 P-type ATPase, cytoplasmic domain N PF552_12025 IPR023214 HAD superfamily PF552_12025 IPR036412 HAD-like superfamily PF552_12030 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ PF552_12030 IPR017969 Heavy-metal-associated, conserved site PF552_12030 IPR036163 Heavy metal-associated domain superfamily PF552_12030 IPR006121 Heavy metal-associated domain, HMA PF552_12030 IPR011795 Mercuric transport protein periplasmic component PF552_12035 IPR036390 Winged helix DNA-binding domain superfamily PF552_12035 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_12035 IPR000847 Transcription regulator HTH, LysR PF552_12035 IPR005119 LysR, substrate-binding PF552_12045 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit PF552_12045 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain PF552_12045 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site PF552_12045 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PF552_12045 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PF552_12045 IPR017639 Benzoate 1,2-dioxygenase, large subunit PF552_12055 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_12055 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_12055 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PF552_12055 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_12055 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PF552_12055 IPR012675 Beta-grasp domain superfamily PF552_12055 IPR017938 Riboflavin synthase-like beta-barrel PF552_12055 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PF552_12055 IPR036010 2Fe-2S ferredoxin-like superfamily PF552_12055 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PF552_12060 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_12060 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_12060 IPR036291 NAD(P)-binding domain superfamily PF552_12065 IPR004711 Benzoate transporter PF552_12070 IPR011701 Major facilitator superfamily PF552_12070 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family PF552_12070 IPR020846 Major facilitator superfamily domain PF552_12070 IPR036259 MFS transporter superfamily PF552_12070 IPR005829 Sugar transporter, conserved site PF552_12080 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 PF552_12080 IPR016039 Thiolase-like PF552_12080 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PF552_12080 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal PF552_12085 IPR003593 AAA+ ATPase domain PF552_12085 IPR011545 DEAD/DEAH box helicase domain PF552_12085 IPR011709 Domain of unknown function DUF1605 PF552_12085 IPR007502 Helicase-associated domain PF552_12085 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_12085 IPR001650 Helicase, C-terminal PF552_12085 IPR024590 RNA helicase HrpA, C-terminal PF552_12085 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_12085 IPR010222 RNA helicase HrpA PF552_12090 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PF552_12090 IPR024706 Peroxiredoxin, AhpC-type PF552_12090 IPR019479 Peroxiredoxin, C-terminal PF552_12090 IPR036249 Thioredoxin-like superfamily PF552_12090 IPR013766 Thioredoxin domain PF552_12090 IPR017559 Alkyl hydroperoxide reductase subunit C PF552_12100 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase PF552_12100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_12110 IPR012336 Thioredoxin-like fold PF552_12110 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PF552_12110 IPR002109 Glutaredoxin PF552_12110 IPR023753 FAD/NAD(P)-binding domain PF552_12110 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_12110 IPR012081 Alkyl hydroperoxide reductase subunit F PF552_12110 IPR036249 Thioredoxin-like superfamily PF552_12120 IPR036249 Thioredoxin-like superfamily PF552_12120 IPR010987 Glutathione S-transferase, C-terminal-like PF552_12120 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PF552_12120 IPR004045 Glutathione S-transferase, N-terminal PF552_12120 IPR004046 Glutathione S-transferase, C-terminal PF552_12130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_12130 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type PF552_12290 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PF552_12290 IPR036249 Thioredoxin-like superfamily PF552_12290 IPR004046 Glutathione S-transferase, C-terminal PF552_12290 IPR004045 Glutathione S-transferase, N-terminal PF552_12290 IPR010987 Glutathione S-transferase, C-terminal-like PF552_12300 IPR006664 Outer membrane protein, bacterial PF552_12300 IPR039567 Glycine zipper domain PF552_12300 IPR006690 Outer membrane protein, OmpA-like, conserved site PF552_12300 IPR036737 OmpA-like domain superfamily PF552_12300 IPR006665 OmpA-like domain PF552_12305 IPR011059 Metal-dependent hydrolase, composite domain superfamily PF552_12305 IPR032466 Metal-dependent hydrolase PF552_12305 IPR004722 Dihydroorotase PF552_12305 IPR006680 Amidohydrolase-related PF552_12310 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding PF552_12310 IPR006130 Aspartate/ornithine carbamoyltransferase PF552_12310 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily PF552_12310 IPR002082 Aspartate carbamoyltransferase PF552_12310 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain PF552_12320 IPR000241 Putative RNA methylase domain PF552_12320 IPR017244 Ribosomal RNA large subunit methyltransferase K/L PF552_12320 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PF552_12320 IPR019614 S-adenosylmethionine-dependent methyltransferase PF552_12320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_12320 IPR004114 THUMP domain PF552_12335 IPR004176 Clp, N-terminal PF552_12335 IPR036628 Clp, N-terminal domain superfamily PF552_12335 IPR019489 Clp ATPase, C-terminal PF552_12335 IPR017730 Chaperonin ClpB PF552_12335 IPR028299 ClpA/B, conserved site 2 PF552_12335 IPR003593 AAA+ ATPase domain PF552_12335 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_12335 IPR041546 ClpA/ClpB, AAA lid domain PF552_12335 IPR003959 ATPase, AAA-type, core PF552_12335 IPR001270 ClpA/B family PF552_12335 IPR018368 ClpA/B, conserved site 1 PF552_12350 IPR015946 K homology domain-like, alpha/beta PF552_12350 IPR003718 OsmC/Ohr family PF552_12350 IPR036102 OsmC/Ohr superfamily PF552_12360 IPR036390 Winged helix DNA-binding domain superfamily PF552_12360 IPR018490 Cyclic nucleotide-binding-like PF552_12360 IPR018488 Cyclic nucleotide-binding, conserved site PF552_12360 IPR000595 Cyclic nucleotide-binding domain PF552_12360 IPR012318 Crp-type HTH domain PF552_12360 IPR014710 RmlC-like jelly roll fold PF552_12360 IPR018335 Transcription regulator HTH, Crp-type, conserved site PF552_12360 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_12365 IPR036812 NADP-dependent oxidoreductase domain superfamily PF552_12365 IPR023210 NADP-dependent oxidoreductase domain PF552_12365 IPR020471 Aldo/keto reductase PF552_12380 IPR042109 Adenylosuccinate synthetase, domain 1 PF552_12380 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_12380 IPR001114 Adenylosuccinate synthetase PF552_12380 IPR042111 Adenylosuccinate synthetase, domain 3 PF552_12380 IPR033128 Adenylosuccinate synthase, active site PF552_12380 IPR042110 Adenylosuccinate synthetase, domain 2 PF552_12380 IPR018220 Adenylosuccinate synthase, GTP-binding site PF552_12385 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit PF552_12385 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain PF552_12385 IPR004517 ATP phosphoribosyltransferase regulatory subunit PF552_12395 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain PF552_12395 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site PF552_12395 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I PF552_12395 IPR036291 NAD(P)-binding domain superfamily PF552_12395 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain PF552_12395 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family PF552_12400 IPR002318 Alanine-tRNA ligase, class IIc PF552_12400 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily PF552_12400 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain PF552_12400 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal PF552_12400 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria PF552_12400 IPR003156 DHHA1 domain PF552_12400 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily PF552_12400 IPR009000 Translation protein, beta-barrel domain superfamily PF552_12400 IPR012947 Threonyl/alanyl tRNA synthetase, SAD PF552_12405 IPR005260 Aspartate kinase, monofunctional class PF552_12405 IPR001341 Aspartate kinase PF552_12405 IPR018042 Aspartate kinase, conserved site PF552_12405 IPR027795 CASTOR, ACT domain PF552_12405 IPR001048 Aspartate/glutamate/uridylate kinase PF552_12405 IPR036393 Acetylglutamate kinase-like superfamily PF552_12405 IPR002912 ACT domain PF552_12405 IPR041740 Aspartokinase catalytic domain PF552_12410 IPR003751 Translational regulator CsrA PF552_12410 IPR036107 Carbon storage regulator superfamily PF552_12415 IPR036397 Ribonuclease H superfamily PF552_12415 IPR012337 Ribonuclease H-like superfamily PF552_12415 IPR024567 Ribonuclease HII/HIII domain PF552_12415 IPR001352 Ribonuclease HII/HIII PF552_12415 IPR022898 Ribonuclease HII PF552_12425 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase PF552_12425 IPR016174 Di-haem cytochrome, transmembrane PF552_12430 IPR006330 Adenosine/adenine deaminase PF552_12430 IPR001365 Adenosine/AMP deaminase domain PF552_12430 IPR028892 Adenine deaminase type 2 PF552_12430 IPR032466 Metal-dependent hydrolase PF552_12435 IPR026033 Azaguanine-like transporters PF552_12435 IPR006043 Xanthine/uracil/vitamin C permease PF552_12445 IPR020946 Flavin monooxygenase-like PF552_12445 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_12450 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_12450 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_12450 IPR036291 NAD(P)-binding domain superfamily PF552_12460 IPR012093 Pirin PF552_12460 IPR003829 Pirin, N-terminal domain PF552_12460 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain PF552_12460 IPR014710 RmlC-like jelly roll fold PF552_12460 IPR011051 RmlC-like cupin domain superfamily PF552_12465 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PF552_12465 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal PF552_12465 IPR001647 DNA-binding HTH domain, TetR-type PF552_12465 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PF552_12465 IPR009057 Homeobox-like domain superfamily PF552_12475 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_12475 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_12475 IPR036291 NAD(P)-binding domain superfamily PF552_12480 IPR020946 Flavin monooxygenase-like PF552_12480 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_12485 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP PF552_12485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_12485 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp PF552_12485 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative PF552_12490 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PF552_12490 IPR009057 Homeobox-like domain superfamily PF552_12490 IPR018060 DNA binding HTH domain, AraC-type PF552_12495 IPR020946 Flavin monooxygenase-like PF552_12495 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_12500 IPR036291 NAD(P)-binding domain superfamily PF552_12500 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_12500 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_12505 IPR013094 Alpha/beta hydrolase fold-3 PF552_12505 IPR002168 Lipase, GDXG, putative histidine active site PF552_12505 IPR033140 Lipase, GDXG, putative serine active site PF552_12505 IPR029058 Alpha/Beta hydrolase fold PF552_12510 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_12510 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal PF552_12515 IPR005318 Outer membrane porin, bacterial PF552_12515 IPR023614 Porin domain superfamily PF552_12520 IPR020846 Major facilitator superfamily domain PF552_12520 IPR005829 Sugar transporter, conserved site PF552_12520 IPR011701 Major facilitator superfamily PF552_12520 IPR036259 MFS transporter superfamily PF552_12520 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family PF552_12525 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PF552_12525 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PF552_12525 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site PF552_12530 IPR017938 Riboflavin synthase-like beta-barrel PF552_12530 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_12530 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_12530 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_12530 IPR012675 Beta-grasp domain superfamily PF552_12530 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PF552_12530 IPR036010 2Fe-2S ferredoxin-like superfamily PF552_12530 IPR000951 Phthalate dioxygenase reductase PF552_12530 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PF552_12550 IPR005829 Sugar transporter, conserved site PF552_12550 IPR036259 MFS transporter superfamily PF552_12550 IPR011701 Major facilitator superfamily PF552_12550 IPR020846 Major facilitator superfamily domain PF552_12555 IPR029045 ClpP/crotonase-like domain superfamily PF552_12555 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PF552_12555 IPR001753 Enoyl-CoA hydratase/isomerase PF552_12560 IPR016161 Aldehyde/histidinol dehydrogenase PF552_12560 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_12560 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_12560 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_12560 IPR015590 Aldehyde dehydrogenase domain PF552_12570 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_12570 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_12570 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_12570 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_12570 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_12570 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_12570 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_12575 IPR023614 Porin domain superfamily PF552_12575 IPR005318 Outer membrane porin, bacterial PF552_12580 IPR020915 Uncharacterised protein family UPF0311 PF552_12590 IPR029058 Alpha/Beta hydrolase fold PF552_12590 IPR011118 Tannase/feruloyl esterase PF552_12595 IPR036390 Winged helix DNA-binding domain superfamily PF552_12595 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_12595 IPR000524 Transcription regulator HTH, GntR PF552_12595 IPR008920 Transcription regulator FadR/GntR, C-terminal PF552_12595 IPR011711 GntR, C-terminal PF552_12600 IPR015590 Aldehyde dehydrogenase domain PF552_12600 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_12600 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_12600 IPR016161 Aldehyde/histidinol dehydrogenase PF552_12605 IPR013785 Aldolase-type TIM barrel PF552_12605 IPR017655 5-dehydro-4-deoxyglucarate dehydratase PF552_12605 IPR002220 DapA-like PF552_12610 IPR029065 Enolase C-terminal domain-like PF552_12610 IPR017653 Glucarate dehydratase PF552_12610 IPR034598 D-Glucarate dehydratase-like PF552_12610 IPR034593 Mandelate racemase-like PF552_12610 IPR029017 Enolase-like, N-terminal PF552_12610 IPR036849 Enolase-like, C-terminal domain superfamily PF552_12610 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PF552_12615 IPR000849 Sugar phosphate transporter PF552_12615 IPR011701 Major facilitator superfamily PF552_12615 IPR036259 MFS transporter superfamily PF552_12615 IPR020846 Major facilitator superfamily domain PF552_12620 IPR007392 D-galactarate/Altronate dehydratase, C-terminal PF552_12620 IPR017654 Galactarate dehydratase GarD-like PF552_12620 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae PF552_12620 IPR013974 SAF domain PF552_12625 IPR000620 EamA domain PF552_12645 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent PF552_12645 IPR015590 Aldehyde dehydrogenase domain PF552_12645 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_12645 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_12645 IPR016161 Aldehyde/histidinol dehydrogenase PF552_12645 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_12670 IPR004841 Amino acid permease/ SLC12A domain PF552_12670 IPR004840 Amino acid permease, conserved site PF552_12675 IPR007041 Arginine N-succinyltransferase AstA/AruG PF552_12675 IPR016181 Acyl-CoA N-acyltransferase PF552_12675 IPR017650 Arginine N-succinyltransferase PF552_12680 IPR005814 Aminotransferase class-III PF552_12680 IPR015424 Pyridoxal phosphate-dependent transferase PF552_12680 IPR004636 Acetylornithine/Succinylornithine transaminase family PF552_12680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_12680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_12680 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria PF552_12680 IPR026330 Succinylornithine transaminase PF552_12690 IPR016161 Aldehyde/histidinol dehydrogenase PF552_12690 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_12690 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_12690 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_12690 IPR017749 1-pyrroline dehydrogenase PF552_12690 IPR015590 Aldehyde dehydrogenase domain PF552_12690 IPR015657 Aminobutyraldehyde dehydrogenase PF552_12700 IPR008920 Transcription regulator FadR/GntR, C-terminal PF552_12700 IPR000524 Transcription regulator HTH, GntR PF552_12700 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_12700 IPR036390 Winged helix DNA-binding domain superfamily PF552_12700 IPR011711 GntR, C-terminal PF552_12710 IPR004841 Amino acid permease/ SLC12A domain PF552_12715 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_12715 IPR012727 Glycine oxidase ThiO PF552_12715 IPR006076 FAD dependent oxidoreductase PF552_12720 IPR004841 Amino acid permease/ SLC12A domain PF552_12720 IPR004840 Amino acid permease, conserved site PF552_12760 IPR006530 YD repeat PF552_12760 IPR001826 RHS protein PF552_12760 IPR031325 RHS repeat PF552_12760 IPR022385 Rhs repeat-associated core PF552_12765 IPR037026 Vgr protein, OB-fold domain superfamily PF552_12765 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PF552_12765 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PF552_12765 IPR006531 Gp5 N-terminal PF552_12765 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PF552_12765 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PF552_12775 IPR004872 Lipoprotein NlpA family PF552_12780 IPR010295 Protein of unknown function DUF898 PF552_12795 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PF552_12795 IPR023753 FAD/NAD(P)-binding domain PF552_12795 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_12795 IPR013785 Aldolase-type TIM barrel PF552_12800 IPR018223 Argininosuccinate synthase, conserved site PF552_12800 IPR023437 Argininosuccinate synthase, type 2 subfamily PF552_12800 IPR001518 Argininosuccinate synthase PF552_12800 IPR023434 Argininosuccinate synthase, type 1 subfamily PF552_12800 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body PF552_12800 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail PF552_12800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_12805 IPR000160 GGDEF domain PF552_12805 IPR029016 GAF-like domain superfamily PF552_12805 IPR003018 GAF domain PF552_12805 IPR035919 EAL domain superfamily PF552_12805 IPR001633 EAL domain PF552_12805 IPR016132 Phytochrome chromophore attachment domain PF552_12805 IPR029787 Nucleotide cyclase PF552_12805 IPR001294 Phytochrome PF552_12805 IPR013515 Phytochrome, central region PF552_12810 IPR006680 Amidohydrolase-related PF552_12810 IPR002195 Dihydroorotase, conserved site PF552_12810 IPR032466 Metal-dependent hydrolase PF552_12810 IPR004721 Dihydroorotase homodimeric type PF552_12815 IPR036397 Ribonuclease H superfamily PF552_12815 IPR012337 Ribonuclease H-like superfamily PF552_12815 IPR013520 Exonuclease, RNase T/DNA polymerase III PF552_12815 IPR005987 Ribonuclease T PF552_12825 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_12825 IPR039423 TonB-dependent receptor-like PF552_12825 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_12825 IPR010105 TonB-dependent siderophore receptor PF552_12825 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_12825 IPR012910 TonB-dependent receptor, plug domain PF552_12835 IPR013785 Aldolase-type TIM barrel PF552_12835 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_12835 IPR023753 FAD/NAD(P)-binding domain PF552_12835 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PF552_12840 IPR017871 ABC transporter, conserved site PF552_12840 IPR003593 AAA+ ATPase domain PF552_12840 IPR003439 ABC transporter-like PF552_12840 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PF552_12840 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_12845 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PF552_12845 IPR035906 MetI-like superfamily PF552_12845 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_12850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_12850 IPR035906 MetI-like superfamily PF552_12855 IPR030678 Peptide/nickel binding protein, MppA-type PF552_12855 IPR039424 Solute-binding protein family 5 PF552_12855 IPR000914 Solute-binding protein family 5 domain PF552_12860 IPR023346 Lysozyme-like domain superfamily PF552_12860 IPR000189 Prokaryotic transglycosylase, active site PF552_12860 IPR018392 LysM domain PF552_12860 IPR036779 LysM domain superfamily PF552_12860 IPR023346 Lysozyme-like domain superfamily PF552_12860 IPR000189 Prokaryotic transglycosylase, active site PF552_12860 IPR008258 Transglycosylase SLT domain 1 PF552_12860 IPR008258 Transglycosylase SLT domain 1 PF552_12860 IPR036779 LysM domain superfamily PF552_12860 IPR018392 LysM domain PF552_12865 IPR012337 Ribonuclease H-like superfamily PF552_12865 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain PF552_12865 IPR036397 Ribonuclease H superfamily PF552_12865 IPR006309 DNA polymerase 3, epsilon subunit PF552_12865 IPR013520 Exonuclease, RNase T/DNA polymerase III PF552_12875 IPR015376 Zinc ribbon, NADH pyrophosphatase PF552_12875 IPR000086 NUDIX hydrolase domain PF552_12875 IPR020084 NUDIX hydrolase, conserved site PF552_12875 IPR015797 NUDIX hydrolase-like domain superfamily PF552_12875 IPR022925 NADH pyrophosphatase NudC PF552_12885 IPR014004 Transport-associated and nodulation domain, bacteria PF552_12885 IPR007055 BON domain PF552_12890 IPR011335 Restriction endonuclease type II-like PF552_12890 IPR011856 tRNA endonuclease-like domain superfamily PF552_12890 IPR003509 Uncharacterised protein family UPF0102 PF552_12895 IPR014777 Tetrapyrrole methylase, subdomain 1 PF552_12895 IPR000878 Tetrapyrrole methylase PF552_12895 IPR035996 Tetrapyrrole methylase superfamily PF552_12895 IPR014776 Tetrapyrrole methylase, subdomain 2 PF552_12895 IPR008189 rRNA small subunit methyltransferase I PF552_12895 IPR018063 SAM-dependent methyltransferase RsmI, conserved site PF552_12905 IPR017685 HTH-type transcriptional regulator ArgP PF552_12905 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria PF552_12905 IPR005119 LysR, substrate-binding PF552_12905 IPR000847 Transcription regulator HTH, LysR PF552_12905 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_12905 IPR036390 Winged helix DNA-binding domain superfamily PF552_12910 IPR023445 Arginine exporter protein ArgO, enterobacteria PF552_12910 IPR001123 Amino acid exporter protein, LeuE-type PF552_12910 IPR004777 L-lysine exporter/arginine exporter PF552_12920 IPR009061 Putative DNA-binding domain superfamily PF552_12920 IPR011794 Hg(II)-responsive transcriptional regulator PF552_12920 IPR000551 MerR-type HTH domain PF552_12930 IPR002938 FAD-binding domain PF552_12930 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site PF552_12930 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 PF552_12930 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_12935 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_12935 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site PF552_12935 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase PF552_12935 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 PF552_12935 IPR002938 FAD-binding domain PF552_12940 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PF552_12940 IPR007865 Aminopeptidase P, N-terminal PF552_12940 IPR001714 Peptidase M24, methionine aminopeptidase PF552_12940 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PF552_12940 IPR000994 Peptidase M24 PF552_12940 IPR036005 Creatinase/aminopeptidase-like PF552_12975 IPR040423 Phosphoethanolamine transferase PF552_12975 IPR000917 Sulfatase, N-terminal PF552_12975 IPR017850 Alkaline-phosphatase-like, core domain superfamily PF552_12975 IPR012549 Phosphoethanolamine transferase, N-terminal PF552_13030 IPR011055 Duplicated hybrid motif PF552_13030 IPR018392 LysM domain PF552_13030 IPR013731 Opacity-associated protein A, N-terminal PF552_13030 IPR016047 Peptidase M23 PF552_13065 IPR031807 HicB-like antitoxin of toxin-antitoxin system PF552_13065 IPR035069 TTHA1013/TTHA0281-like PF552_13345 IPR002698 5-formyltetrahydrofolate cyclo-ligase PF552_13345 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily PF552_13345 IPR037171 NagB/RpiA transferase-like PF552_13355 IPR027543 Lon protease, bacterial PF552_13355 IPR003593 AAA+ ATPase domain PF552_13355 IPR003959 ATPase, AAA-type, core PF552_13355 IPR015947 PUA-like superfamily PF552_13355 IPR004815 Lon protease, bacterial/eukaryotic-type PF552_13355 IPR008269 Peptidase S16, Lon proteolytic domain PF552_13355 IPR027065 Lon protease PF552_13355 IPR003111 Lon, substrate-binding domain PF552_13355 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_13355 IPR008268 Peptidase S16, active site PF552_13355 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_13355 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PF552_13360 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PF552_13360 IPR003742 RNA methyltransferase RlmH PF552_13360 IPR029028 Alpha/beta knot methyltransferases PF552_13365 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B PF552_13365 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type PF552_13375 IPR033524 Leu/Phe/Val dehydrogenases active site PF552_13375 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase PF552_13375 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal PF552_13375 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain PF552_13375 IPR014362 Glutamate dehydrogenase PF552_13375 IPR036291 NAD(P)-binding domain superfamily PF552_13375 IPR033922 NAD(P) binding domain of glutamate dehydrogenase PF552_13380 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB PF552_13380 IPR007202 4Fe-4S domain PF552_13380 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PF552_13380 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PF552_13380 IPR011005 Dihydropteroate synthase-like PF552_13380 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria PF552_13385 IPR011257 DNA glycosylase PF552_13385 IPR004036 Endonuclease III-like, conserved site-2 PF552_13385 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif PF552_13385 IPR004035 Endonuclease III, iron-sulphur binding site PF552_13385 IPR003265 HhH-GPD domain PF552_13385 IPR005759 Endonuclease III PF552_13385 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PF552_13385 IPR000445 Helix-hairpin-helix motif PF552_13395 IPR033690 Adenylate kinase, conserved site PF552_13395 IPR000850 Adenylate kinase/UMP-CMP kinase PF552_13395 IPR007862 Adenylate kinase, active site lid domain PF552_13395 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_13395 IPR006259 Adenylate kinase subfamily PF552_13410 IPR012338 Beta-lactamase/transpeptidase-like PF552_13410 IPR005311 Penicillin-binding protein, dimerisation domain PF552_13410 IPR036138 Penicillin-binding protein, dimerisation domain superfamily PF552_13410 IPR001460 Penicillin-binding protein, transpeptidase PF552_13410 IPR017790 Penicillin-binding protein 2 PF552_13415 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PF552_13415 IPR004398 RNA methyltransferase, RsmD PF552_13415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_13425 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PF552_13425 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_13425 IPR004400 Urease accessory protein UreG PF552_13430 IPR038277 UreF domain superfamily PF552_13430 IPR002639 Urease accessory protein UreF PF552_13435 IPR007864 Urease accessory protein UreE, C-terminal domain PF552_13435 IPR012406 Urease accessory protein UreE PF552_13435 IPR036118 UreE urease accessory, N-terminal domain superfamily PF552_13435 IPR004029 UreE urease accessory, N-terminal PF552_13435 IPR036675 UreE, C-terminal domain superfamily PF552_13440 IPR032466 Metal-dependent hydrolase PF552_13440 IPR011059 Metal-dependent hydrolase, composite domain superfamily PF552_13440 IPR006680 Amidohydrolase-related PF552_13440 IPR011612 Urease alpha-subunit, N-terminal domain PF552_13440 IPR017950 Urease active site PF552_13440 IPR017951 Urease alpha subunit, C-terminal PF552_13440 IPR029754 Urease nickel binding site PF552_13440 IPR005848 Urease, alpha subunit PF552_13445 IPR036461 Urease, beta subunit superfamily PF552_13445 IPR002019 Urease, beta subunit PF552_13450 IPR036463 Urease, gamma subunit superfamily PF552_13450 IPR002026 Urease, gamma/gamma-beta subunit PF552_13450 IPR012010 Urease, gamma subunit PF552_13455 IPR002669 Urease accessory protein UreD PF552_13470 IPR039556 ICL/PEPM domain PF552_13470 IPR040442 Pyruvate kinase-like domain superfamily PF552_13470 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PF552_13470 IPR006254 Isocitrate lyase PF552_13475 IPR005119 LysR, substrate-binding PF552_13475 IPR000847 Transcription regulator HTH, LysR PF552_13475 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_13475 IPR036390 Winged helix DNA-binding domain superfamily PF552_13480 IPR016169 FAD-binding, type PCMH, subdomain 2 PF552_13480 IPR000644 CBS domain PF552_13480 IPR002550 CNNM, transmembrane domain PF552_13480 IPR036318 FAD-binding, type PCMH-like superfamily PF552_13480 IPR005170 Transporter-associated domain PF552_13485 IPR014738 Citrate transporter PF552_13485 IPR004680 Citrate transporter-like domain PF552_13500 IPR011779 Sulphate adenylyltransferase, large subunit PF552_13500 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain PF552_13500 IPR031157 Tr-type G domain, conserved site PF552_13500 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_13500 IPR005225 Small GTP-binding protein domain PF552_13500 IPR002891 Adenylyl-sulfate kinase PF552_13500 IPR000795 Transcription factor, GTP-binding domain PF552_13500 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PF552_13500 IPR009000 Translation protein, beta-barrel domain superfamily PF552_13505 IPR011784 Sulphate adenylyltransferase, small subunit PF552_13505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_13505 IPR002500 Phosphoadenosine phosphosulphate reductase PF552_13515 IPR038636 Capsule assembly protein Wzi superfamily PF552_13515 IPR026950 Capsule assembly protein Wzi PF552_13520 IPR002313 Lysine-tRNA ligase, class II PF552_13520 IPR006195 Aminoacyl-tRNA synthetase, class II PF552_13520 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PF552_13520 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal PF552_13520 IPR012340 Nucleic acid-binding, OB-fold PF552_13520 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PF552_13535 IPR024922 Rubredoxin PF552_13535 IPR024934 Rubredoxin-like domain PF552_13535 IPR024935 Rubredoxin domain PF552_13535 IPR018527 Rubredoxin, iron-binding site PF552_13540 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_13540 IPR023753 FAD/NAD(P)-binding domain PF552_13540 IPR041364 Rubredoxin binding domain PF552_13545 IPR029058 Alpha/Beta hydrolase fold PF552_13545 IPR000073 Alpha/beta hydrolase fold-1 PF552_13545 IPR011942 Poly(3-hydroxyalkanoate) depolymerase PF552_13550 IPR000847 Transcription regulator HTH, LysR PF552_13550 IPR005119 LysR, substrate-binding PF552_13550 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_13550 IPR036390 Winged helix DNA-binding domain superfamily PF552_13565 IPR003414 Polyphosphate kinase PF552_13565 IPR041108 Polyphosphate kinase, C-terminal domain 1 PF552_13565 IPR024953 Polyphosphate kinase middle domain PF552_13565 IPR036830 Polyphosphate kinase middle domain superfamily PF552_13565 IPR025200 Polyphosphate kinase C-terminal domain 2 PF552_13565 IPR025198 Polyphosphate kinase N-terminal domain PF552_13565 IPR036832 Polyphosphate kinase N-terminal domain superfamily PF552_13570 IPR023346 Lysozyme-like domain superfamily PF552_13570 IPR001264 Glycosyl transferase, family 51 PF552_13570 IPR036950 Penicillin binding protein transglycosylase domain PF552_13570 IPR011812 Biosynthetic peptidoglycan transglycosylase PF552_13575 IPR022764 Peptidase S54, rhomboid domain PF552_13575 IPR035952 Rhomboid-like superfamily PF552_13580 IPR038766 Membrane component of ABC transporter, predicted PF552_13585 IPR003439 ABC transporter-like PF552_13585 IPR003593 AAA+ ATPase domain PF552_13585 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_13585 IPR017871 ABC transporter, conserved site PF552_13590 IPR013830 SGNH hydrolase-type esterase domain PF552_13590 IPR036514 SGNH hydrolase superfamily PF552_13595 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site PF552_13595 IPR036874 Carbonic anhydrase superfamily PF552_13595 IPR001765 Carbonic anhydrase PF552_13600 IPR029058 Alpha/Beta hydrolase fold PF552_13600 IPR000073 Alpha/beta hydrolase fold-1 PF552_13600 IPR000639 Epoxide hydrolase-like PF552_13610 IPR010105 TonB-dependent siderophore receptor PF552_13610 IPR010917 TonB-dependent receptor, conserved site PF552_13610 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_13610 IPR012910 TonB-dependent receptor, plug domain PF552_13610 IPR039426 Vitamin B12 transporter BtuB-like PF552_13610 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_13610 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_13615 IPR017726 Fe/S biogenesis protein NfuA PF552_13615 IPR000361 FeS cluster biogenesis PF552_13615 IPR034904 Fe-S cluster assembly domain superfamily PF552_13615 IPR035903 HesB-like domain superfamily PF552_13615 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal PF552_13625 IPR017850 Alkaline-phosphatase-like, core domain superfamily PF552_13625 IPR024607 Sulfatase, conserved site PF552_13625 IPR000917 Sulfatase, N-terminal PF552_13630 IPR042095 Sulfatase-modifying factor enzyme superfamily PF552_13630 IPR016187 C-type lectin fold PF552_13630 IPR005532 Sulfatase-modifying factor enzyme PF552_13650 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PF552_13650 IPR011780 D-serine ammonia-lyase PF552_13650 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PF552_13650 IPR001926 Pyridoxal-phosphate dependent enzyme PF552_13655 IPR001204 Phosphate transporter PF552_13660 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily PF552_13660 IPR004223 Vitamin B12-dependent methionine synthase, activation domain PF552_13660 IPR036594 Methionine synthase domain PF552_13660 IPR033706 Methionine synthase, B12-binding domain PF552_13660 IPR000489 Pterin-binding domain PF552_13660 IPR003726 Homocysteine-binding domain PF552_13660 IPR011005 Dihydropteroate synthase-like PF552_13660 IPR036724 Cobalamin-binding domain superfamily PF552_13660 IPR006158 Cobalamin (vitamin B12)-binding domain PF552_13660 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PF552_13660 IPR036589 Homocysteine-binding domain superfamily PF552_13660 IPR011822 Cobalamin-dependent methionine synthase PF552_13665 IPR029061 Thiamin diphosphate-binding fold PF552_13665 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PF552_13665 IPR005475 Transketolase-like, pyrimidine-binding domain PF552_13665 IPR033248 Transketolase, C-terminal domain PF552_13670 IPR029061 Thiamin diphosphate-binding fold PF552_13670 IPR005474 Transketolase, N-terminal PF552_13675 IPR020846 Major facilitator superfamily domain PF552_13675 IPR036259 MFS transporter superfamily PF552_13675 IPR011701 Major facilitator superfamily PF552_13680 IPR036291 NAD(P)-binding domain superfamily PF552_13680 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_13680 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_13685 IPR036390 Winged helix DNA-binding domain superfamily PF552_13685 IPR000847 Transcription regulator HTH, LysR PF552_13685 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_13685 IPR005119 LysR, substrate-binding PF552_13695 IPR018052 Aldose 1-epimerase, conserved site PF552_13695 IPR015443 Aldose 1-epimerase PF552_13695 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase PF552_13695 IPR011013 Galactose mutarotase-like domain superfamily PF552_13695 IPR014718 Glycoside hydrolase-type carbohydrate-binding PF552_13705 IPR018060 DNA binding HTH domain, AraC-type PF552_13705 IPR020449 Transcription regulator HTH, AraC- type PF552_13705 IPR037923 Transcription regulator HTH-like PF552_13705 IPR018062 HTH domain AraC-type, conserved site PF552_13705 IPR009057 Homeobox-like domain superfamily PF552_13705 IPR003313 AraC-type arabinose-binding/dimerisation domain PF552_13710 IPR012338 Beta-lactamase/transpeptidase-like PF552_13710 IPR015868 Glutaminase PF552_13710 IPR036513 STAS domain superfamily PF552_13710 IPR002645 STAS domain PF552_13715 IPR023635 Peptide deformylase PF552_13715 IPR036821 Peptide deformylase superfamily PF552_13720 IPR011701 Major facilitator superfamily PF552_13720 IPR020846 Major facilitator superfamily domain PF552_13720 IPR036259 MFS transporter superfamily PF552_13720 IPR005829 Sugar transporter, conserved site PF552_13730 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PF552_13730 IPR000399 TPP-binding enzyme, conserved site PF552_13730 IPR029061 Thiamin diphosphate-binding fold PF552_13730 IPR012000 Thiamine pyrophosphate enzyme, central domain PF552_13730 IPR012846 Acetolactate synthase, large subunit, biosynthetic PF552_13730 IPR039368 Acetolactate synthase large subunit, TPP binding domain PF552_13730 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PF552_13730 IPR029035 DHS-like NAD/FAD-binding domain superfamily PF552_13735 IPR011264 Betaine aldehyde dehydrogenase PF552_13735 IPR015590 Aldehyde dehydrogenase domain PF552_13735 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_13735 IPR016161 Aldehyde/histidinol dehydrogenase PF552_13735 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_13735 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_13735 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_13740 IPR036291 NAD(P)-binding domain superfamily PF552_13740 IPR020626 L-aspartate dehydrogenase, prokaryotic PF552_13740 IPR002811 Aspartate dehydrogenase PF552_13740 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding PF552_13740 IPR011182 L-aspartate dehydrogenase PF552_13745 IPR036291 NAD(P)-binding domain superfamily PF552_13745 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_13745 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_13750 IPR000073 Alpha/beta hydrolase fold-1 PF552_13750 IPR029058 Alpha/Beta hydrolase fold PF552_13760 IPR020846 Major facilitator superfamily domain PF552_13760 IPR036259 MFS transporter superfamily PF552_13760 IPR000849 Sugar phosphate transporter PF552_13760 IPR011701 Major facilitator superfamily PF552_13765 IPR023753 FAD/NAD(P)-binding domain PF552_13765 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit PF552_13765 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PF552_13765 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_13765 IPR028202 Reductase, C-terminal PF552_13770 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PF552_13770 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PF552_13770 IPR017626 2,3-dihydroxybiphenyl 1,2-dioxygenase PF552_13770 IPR037523 Vicinal oxygen chelate (VOC) domain PF552_13770 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II PF552_13775 IPR036291 NAD(P)-binding domain superfamily PF552_13775 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_13775 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_13780 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PF552_13780 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PF552_13790 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PF552_13790 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PF552_13795 IPR036390 Winged helix DNA-binding domain superfamily PF552_13795 IPR005471 Transcription regulator IclR, N-terminal PF552_13795 IPR014757 Transcription regulator IclR, C-terminal PF552_13795 IPR029016 GAF-like domain superfamily PF552_13795 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_13810 IPR022852 Carnitinyl-CoA dehydratase PF552_13810 IPR029045 ClpP/crotonase-like domain superfamily PF552_13810 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PF552_13810 IPR001753 Enoyl-CoA hydratase/isomerase PF552_13810 IPR014748 Enoyl-CoA hydratase, C-terminal PF552_13820 IPR001173 Glycosyltransferase 2-like PF552_13820 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA PF552_13820 IPR029044 Nucleotide-diphospho-sugar transferases PF552_13825 IPR002509 NodB homology domain PF552_13825 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal PF552_13825 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB PF552_13825 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel PF552_13830 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PF552_13835 IPR009822 YaeQ PF552_13835 IPR038590 YaeQ superfamily PF552_13835 IPR011335 Restriction endonuclease type II-like PF552_13840 IPR036458 Sodium:dicarboxylate symporter superfamily PF552_13840 IPR018107 Sodium:dicarboxylate symporter, conserved site PF552_13840 IPR023954 C4-dicarboxylate transport protein PF552_13840 IPR001991 Sodium:dicarboxylate symporter PF552_13845 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PF552_13845 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PF552_13845 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_13855 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase PF552_13855 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain PF552_13855 IPR029069 HotDog domain superfamily PF552_13855 IPR006683 Thioesterase domain PF552_13865 IPR018093 BCCT transporter, conserved site PF552_13865 IPR000060 BCCT transporter family PF552_13870 IPR018093 BCCT transporter, conserved site PF552_13870 IPR000060 BCCT transporter family PF552_13875 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PF552_13875 IPR001647 DNA-binding HTH domain, TetR-type PF552_13875 IPR017757 Transcriptional repressor BetI PF552_13875 IPR039538 BetI-type transcriptional repressor, C-terminal PF552_13875 IPR009057 Homeobox-like domain superfamily PF552_13880 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_13880 IPR011264 Betaine aldehyde dehydrogenase PF552_13880 IPR015590 Aldehyde dehydrogenase domain PF552_13880 IPR016161 Aldehyde/histidinol dehydrogenase PF552_13880 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_13880 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_13880 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_13885 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal PF552_13885 IPR012132 Glucose-methanol-choline oxidoreductase PF552_13885 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal PF552_13885 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_13885 IPR011533 Oxygen-dependent choline dehydrogenase PF552_13885 IPR027424 Glucose Oxidase, domain 2 PF552_13890 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_13890 IPR006231 Malate:quinone-oxidoreductase PF552_13900 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT PF552_13900 IPR003726 Homocysteine-binding domain PF552_13900 IPR036589 Homocysteine-binding domain superfamily PF552_13905 IPR002293 Amino acid/polyamine transporter I PF552_13905 IPR004754 Amino acid antiporter PF552_13930 IPR016053 Haem oxygenase-like PF552_13930 IPR016084 Haem oxygenase-like, multi-helical PF552_13950 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_13950 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_13950 IPR012910 TonB-dependent receptor, plug domain PF552_13950 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_13950 IPR039426 Vitamin B12 transporter BtuB-like PF552_13960 IPR039425 RNA polymerase sigma-70 like PF552_13960 IPR014284 RNA polymerase sigma-70 like domain PF552_13960 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PF552_13960 IPR007627 RNA polymerase sigma-70 region 2 PF552_13960 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PF552_13960 IPR013325 RNA polymerase sigma factor, region 2 PF552_13960 IPR013324 RNA polymerase sigma factor, region 3/4-like PF552_13960 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_13970 IPR020624 Schiff base-forming aldolase, conserved site PF552_13970 IPR013785 Aldolase-type TIM barrel PF552_13970 IPR002220 DapA-like PF552_13970 IPR020625 Schiff base-forming aldolase, active site PF552_13975 IPR005829 Sugar transporter, conserved site PF552_13975 IPR005828 Major facilitator, sugar transporter-like PF552_13975 IPR036259 MFS transporter superfamily PF552_13975 IPR020846 Major facilitator superfamily domain PF552_13985 IPR013670 EcoEI R protein C-terminal domain PF552_13985 IPR006935 Helicase/UvrB, N-terminal PF552_13985 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_13985 IPR001650 Helicase, C-terminal PF552_13985 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_13985 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal PF552_13995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_13995 IPR003356 DNA methylase, adenine-specific PF552_13995 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PF552_13995 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily PF552_13995 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PF552_14040 IPR039418 LexA-like PF552_14040 IPR036286 LexA/Signal peptidase-like superfamily PF552_14040 IPR015927 Peptidase S24/S26A/S26B/S26C PF552_14040 IPR006197 Peptidase S24, LexA-like PF552_14045 IPR024728 DNA polymerase type-Y, HhH motif PF552_14045 IPR017961 DNA polymerase, Y-family, little finger domain PF552_14045 IPR036775 DNA polymerase, Y-family, little finger domain superfamily PF552_14045 IPR025188 Domain of unknown function DUF4113 PF552_14045 IPR001126 UmuC domain PF552_14130 IPR022637 DNA polymerase III, beta sliding clamp, central PF552_14130 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal PF552_14130 IPR001001 DNA polymerase III, beta sliding clamp PF552_14130 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal PF552_14170 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF552_14170 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PF552_14390 IPR003593 AAA+ ATPase domain PF552_14390 IPR002611 IstB-like ATP-binding protein PF552_14390 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_14475 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain PF552_14475 IPR013520 Exonuclease, RNase T/DNA polymerase III PF552_14475 IPR012337 Ribonuclease H-like superfamily PF552_14475 IPR036397 Ribonuclease H superfamily PF552_14545 IPR000101 Gamma-glutamyltranspeptidase PF552_14545 IPR029055 Nucleophile aminohydrolases, N-terminal PF552_14550 IPR011701 Major facilitator superfamily PF552_14550 IPR004638 Drug resistance transporter EmrB-like PF552_14550 IPR020846 Major facilitator superfamily domain PF552_14550 IPR036259 MFS transporter superfamily PF552_14555 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PF552_14560 IPR029069 HotDog domain superfamily PF552_14560 IPR003736 Phenylacetic acid degradation-related domain PF552_14560 IPR006683 Thioesterase domain PF552_14565 IPR013785 Aldolase-type TIM barrel PF552_14565 IPR030656 Delta-aminolevulinic acid dehydratase, active site PF552_14565 IPR001731 Delta-aminolevulinic acid dehydratase PF552_14570 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_14570 IPR012727 Glycine oxidase ThiO PF552_14570 IPR006076 FAD dependent oxidoreductase PF552_14575 IPR013549 Domain of unknown function DUF1731 PF552_14575 IPR001509 NAD-dependent epimerase/dehydratase PF552_14575 IPR010099 Epimerase family protein SDR39U1 PF552_14575 IPR036291 NAD(P)-binding domain superfamily PF552_14595 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PF552_14595 IPR029052 Metallo-dependent phosphatase-like PF552_14595 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain PF552_14595 IPR026843 Nuclease SbcCD subunit D, C-terminal domain PF552_14595 IPR004593 Nuclease SbcCD subunit D PF552_14600 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_14605 IPR001608 Alanine racemase, N-terminal PF552_14605 IPR029066 PLP-binding barrel PF552_14605 IPR011078 Pyridoxal phosphate homeostasis protein PF552_14610 IPR003593 AAA+ ATPase domain PF552_14610 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_14610 IPR006321 Pilus retraction protein PilT PF552_14610 IPR001482 Type II/IV secretion system protein PF552_14615 IPR006321 Pilus retraction protein PilT PF552_14615 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_14615 IPR001482 Type II/IV secretion system protein PF552_14620 IPR036390 Winged helix DNA-binding domain superfamily PF552_14620 IPR002481 Ferric-uptake regulator PF552_14620 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_14625 IPR026592 Outer membrane protein assembly factor BamE PF552_14625 IPR037873 BamE-like PF552_14625 IPR007450 Lipoprotein SmpA/OmlA PF552_14630 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PF552_14630 IPR005346 RnfH protein PF552_14630 IPR037021 RnfH superfamily PF552_14640 IPR012312 Haemerythrin-like PF552_14640 IPR016131 Haemerythrin, iron-binding site PF552_14640 IPR023504 Bacteriohemerythrin-like protein PF552_14640 IPR012827 Haemerythrin, metal-binding domain PF552_14640 IPR035938 Hemerythrin-like superfamily PF552_14645 IPR017932 Glutamine amidotransferase type 2 domain PF552_14645 IPR029055 Nucleophile aminohydrolases, N-terminal PF552_14645 IPR026869 Putative glutamine amidotransferase type 2 PF552_14655 IPR036393 Acetylglutamate kinase-like superfamily PF552_14655 IPR004662 Acetylglutamate kinase family PF552_14655 IPR037528 Acetylglutamate kinase ArgB PF552_14655 IPR001048 Aspartate/glutamate/uridylate kinase PF552_14655 IPR041727 N-Acetyl-L-glutamate kinase, cyclic PF552_14660 IPR005841 Alpha-D-phosphohexomutase superfamily PF552_14660 IPR016066 Alpha-D-phosphohexomutase, conserved site PF552_14660 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily PF552_14660 IPR005843 Alpha-D-phosphohexomutase, C-terminal PF552_14660 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II PF552_14660 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III PF552_14660 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I PF552_14660 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III PF552_14665 IPR029054 dUTPase-like PF552_14665 IPR036157 dUTPase-like superfamily PF552_14665 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase PF552_14665 IPR033704 dUTPase, trimeric PF552_14670 IPR000212 DNA helicase, UvrD/REP type PF552_14670 IPR034739 UvrD/AddA helicase, N-terminal PF552_14670 IPR005752 ATP-dependent DNA helicase Rep PF552_14670 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_14670 IPR014016 UvrD-like helicase, ATP-binding domain PF552_14670 IPR013986 DExx box DNA helicase domain superfamily PF552_14670 IPR014017 UvrD-like DNA helicase, C-terminal PF552_14675 IPR039567 Glycine zipper domain PF552_14675 IPR036737 OmpA-like domain superfamily PF552_14675 IPR006664 Outer membrane protein, bacterial PF552_14675 IPR006690 Outer membrane protein, OmpA-like, conserved site PF552_14675 IPR006665 OmpA-like domain PF552_14680 IPR002123 Phospholipid/glycerol acyltransferase PF552_14690 IPR013033 Septum formation inhibitor MinC PF552_14690 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily PF552_14690 IPR005526 Septum formation inhibitor MinC, C-terminal PF552_14690 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal PF552_14695 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PF552_14695 IPR010223 ATP binding protein MinD, bacterial-type PF552_14695 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_14695 IPR025501 ATP binding protein MinD PF552_14700 IPR005527 Cell division topological specificity factor MinE PF552_14700 IPR036707 Cell division topological specificity factor MinE superfamily PF552_14710 IPR001123 Amino acid exporter protein, LeuE-type PF552_14710 IPR004778 Homoserine/Threonine efflux protein PF552_14715 IPR036390 Winged helix DNA-binding domain superfamily PF552_14715 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_14715 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_14715 IPR025199 DNA translocase FtsK, 4TM region PF552_14715 IPR002543 FtsK domain PF552_14715 IPR041027 FtsK alpha domain PF552_14715 IPR018541 FtsK gamma domain PF552_14720 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PF552_14720 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_14720 IPR023753 FAD/NAD(P)-binding domain PF552_14720 IPR005982 Thioredoxin reductase PF552_14725 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase PF552_14725 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal PF552_14725 IPR016181 Acyl-CoA N-acyltransferase PF552_14730 IPR016181 Acyl-CoA N-acyltransferase PF552_14730 IPR017138 Aspartate/glutamate leucyltransferase PF552_14730 IPR030700 N-end rule aminoacyl transferase PF552_14730 IPR007472 N-end rule aminoacyl transferase, C-terminal PF552_14730 IPR007471 N-end aminoacyl transferase, N-terminal PF552_14735 IPR006464 N-acetyltransferase RimI/Ard1 PF552_14735 IPR016181 Acyl-CoA N-acyltransferase PF552_14735 IPR000182 GNAT domain PF552_14750 IPR009000 Translation protein, beta-barrel domain superfamily PF552_14750 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PF552_14750 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle PF552_14750 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PF552_14750 IPR000795 Transcription factor, GTP-binding domain PF552_14750 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain PF552_14750 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_14750 IPR031157 Tr-type G domain, conserved site PF552_14750 IPR033720 Elongation factor Tu, domain 2 PF552_14750 IPR004161 Translation elongation factor EFTu-like, domain 2 PF552_14750 IPR005225 Small GTP-binding protein domain PF552_14755 IPR000795 Transcription factor, GTP-binding domain PF552_14755 IPR005225 Small GTP-binding protein domain PF552_14755 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PF552_14755 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_14755 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_14755 IPR031157 Tr-type G domain, conserved site PF552_14755 IPR000640 Elongation factor EFG, domain V-like PF552_14755 IPR035649 EFG, domain V PF552_14755 IPR035647 EF-G domain III/V-like PF552_14755 IPR009022 Elongation factor G, domain III PF552_14755 IPR041095 Elongation Factor G, domain II PF552_14755 IPR009000 Translation protein, beta-barrel domain superfamily PF552_14755 IPR004161 Translation elongation factor EFTu-like, domain 2 PF552_14755 IPR005517 Translation elongation factor EFG/EF2, domain IV PF552_14755 IPR004540 Translation elongation factor EFG/EF2 PF552_14760 IPR000235 Ribosomal protein S5/S7 PF552_14760 IPR005717 Ribosomal protein S7, bacterial/organellar-type PF552_14760 IPR020606 Ribosomal protein S7, conserved site PF552_14760 IPR023798 Ribosomal protein S7 domain PF552_14760 IPR036823 Ribosomal protein S7 domain superfamily PF552_14765 IPR006032 Ribosomal protein S12/S23 PF552_14765 IPR012340 Nucleic acid-binding, OB-fold PF552_14765 IPR005679 Ribosomal protein S12, bacterial-type PF552_14775 IPR016039 Thiolase-like PF552_14775 IPR018201 Beta-ketoacyl synthase, active site PF552_14775 IPR014031 Beta-ketoacyl synthase, C-terminal PF552_14775 IPR014030 Beta-ketoacyl synthase, N-terminal PF552_14775 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PF552_14775 IPR000794 Beta-ketoacyl synthase PF552_14780 IPR005265 Protoporphyrinogen oxidase HemJ-like PF552_14785 IPR014710 RmlC-like jelly roll fold PF552_14785 IPR011051 RmlC-like cupin domain superfamily PF552_14785 IPR003829 Pirin, N-terminal domain PF552_14785 IPR008778 Pirin, C-terminal domain PF552_14785 IPR012093 Pirin PF552_14795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_14795 IPR000132 Nitrilase/cyanide hydratase, conserved site PF552_14795 IPR022310 NAD/GMP synthase PF552_14795 IPR014445 Glutamine-dependent NAD(+) synthetase PF552_14795 IPR036526 Carbon-nitrogen hydrolase superfamily PF552_14795 IPR003010 Carbon-nitrogen hydrolase PF552_14795 IPR003694 NAD(+) synthetase PF552_14810 IPR017938 Riboflavin synthase-like beta-barrel PF552_14810 IPR036010 2Fe-2S ferredoxin-like superfamily PF552_14810 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PF552_14810 IPR000951 Phthalate dioxygenase reductase PF552_14810 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_14810 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PF552_14810 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_14810 IPR012675 Beta-grasp domain superfamily PF552_14810 IPR039003 Carnitine monooxygenase reductase subunit PF552_14810 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PF552_14810 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_14815 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_14815 IPR015590 Aldehyde dehydrogenase domain PF552_14815 IPR010102 Succinate semialdehyde dehydrogenase PF552_14815 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_14815 IPR016161 Aldehyde/histidinol dehydrogenase PF552_14815 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_14815 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_14820 IPR039004 Carnitine monooxygenase oxygenase subunit PF552_14820 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PF552_14820 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site PF552_14820 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain PF552_14820 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit PF552_14820 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PF552_14825 IPR029058 Alpha/Beta hydrolase fold PF552_14825 IPR013094 Alpha/beta hydrolase fold-3 PF552_14825 IPR033140 Lipase, GDXG, putative serine active site PF552_14825 IPR002168 Lipase, GDXG, putative histidine active site PF552_14830 IPR000060 BCCT transporter family PF552_14835 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site PF552_14835 IPR024084 Isopropylmalate dehydrogenase-like domain PF552_14835 IPR011829 Tartrate dehydrogenase PF552_14840 IPR005119 LysR, substrate-binding PF552_14840 IPR000847 Transcription regulator HTH, LysR PF552_14840 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_14840 IPR036390 Winged helix DNA-binding domain superfamily PF552_14870 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PF552_14870 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PF552_14875 IPR004821 Cytidyltransferase-like domain PF552_14875 IPR001980 Phosphopantetheine adenylyltransferase PF552_14875 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_14880 IPR023620 Small protein B PF552_14880 IPR000037 SsrA-binding protein PF552_14880 IPR020081 SsrA-binding protein, conserved site PF552_14885 IPR029039 Flavoprotein-like superfamily PF552_14885 IPR008254 Flavodoxin/nitric oxide synthase PF552_14885 IPR005025 NADPH-dependent FMN reductase-like PF552_14890 IPR003730 Multi-copper polyphenol oxidoreductase PF552_14890 IPR038371 Multi-copper polyphenol oxidoreductase superfamily PF552_14890 IPR011324 Cytotoxic necrotizing factor-like, catalytic PF552_14895 IPR006225 Pseudouridine synthase, RluC/RluD PF552_14895 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PF552_14895 IPR002942 RNA-binding S4 domain PF552_14895 IPR036986 RNA-binding S4 domain superfamily PF552_14895 IPR006145 Pseudouridine synthase, RsuA/RluA PF552_14895 IPR020103 Pseudouridine synthase, catalytic domain superfamily PF552_14900 IPR017689 Outer membrane protein assembly factor BamD PF552_14900 IPR039565 Outer membrane lipoprotein BamD-like PF552_14900 IPR011990 Tetratricopeptide-like helical domain superfamily PF552_14905 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PF552_14905 IPR013264 DNA primase, catalytic core, N-terminal PF552_14905 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily PF552_14905 IPR019475 DNA primase, DnaB-helicase binding domain PF552_14905 IPR034151 Bacterial DnaG primase, TOPRIM domain PF552_14905 IPR002694 Zinc finger, CHC2-type PF552_14905 IPR006171 TOPRIM domain PF552_14905 IPR036977 DNA Primase, CHC2-type zinc finger PF552_14905 IPR030846 DNA primase DnaG, bacteria PF552_14905 IPR006295 DNA primase, DnaG PF552_14905 IPR013173 DNA primase DnaG, DnaB-binding domain PF552_14910 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase PF552_14910 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain PF552_14910 IPR018214 Glutamyl-tRNA reductase, conserved site PF552_14910 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily PF552_14910 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily PF552_14910 IPR036291 NAD(P)-binding domain superfamily PF552_14910 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PF552_14910 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal PF552_14920 IPR004565 Outer membrane lipoprotein LolB PF552_14920 IPR029046 Lipoprotein localisation LolA/LolB/LppX PF552_14925 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PF552_14925 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase PF552_14925 IPR006204 GHMP kinase N-terminal domain PF552_14925 IPR036554 GHMP kinase, C-terminal domain superfamily PF552_14925 IPR013750 GHMP kinase, C-terminal domain PF552_14925 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_14950 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site PF552_14950 IPR005946 Ribose-phosphate pyrophosphokinase PF552_14950 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type PF552_14950 IPR000836 Phosphoribosyltransferase domain PF552_14950 IPR029057 Phosphoribosyltransferase-like PF552_14950 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain PF552_14955 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal PF552_14955 IPR029751 Ribosomal protein L25 PF552_14955 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily PF552_14955 IPR020055 Ribosomal protein L25, short-form PF552_14960 IPR036416 Peptidyl-tRNA hydrolase superfamily PF552_14960 IPR001328 Peptidyl-tRNA hydrolase PF552_14960 IPR018171 Peptidyl-tRNA hydrolase, conserved site PF552_14965 IPR009010 Aspartate decarboxylase-like domain superfamily PF552_14965 IPR003190 Aspartate decarboxylase PF552_14980 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PF552_14980 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB PF552_14990 IPR022998 Thiamine phosphate synthase/TenI PF552_14990 IPR036206 Thiamin phosphate synthase superfamily PF552_14990 IPR034291 Thiamine phosphate synthase PF552_14990 IPR004305 Thiaminase-2/PQQC PF552_14990 IPR029056 Ribokinase-like PF552_14990 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase PF552_14990 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase PF552_14990 IPR016084 Haem oxygenase-like, multi-helical PF552_14990 IPR013785 Aldolase-type TIM barrel PF552_14995 IPR007055 BON domain PF552_14995 IPR018392 LysM domain PF552_14995 IPR036779 LysM domain superfamily PF552_14995 IPR014004 Transport-associated and nodulation domain, bacteria PF552_15000 IPR006162 Phosphopantetheine attachment site PF552_15000 IPR009081 Phosphopantetheine binding ACP domain PF552_15000 IPR036736 ACP-like superfamily PF552_15000 IPR003231 Acyl carrier protein (ACP) PF552_15005 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PF552_15005 IPR036291 NAD(P)-binding domain superfamily PF552_15005 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_15005 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_15010 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type PF552_15010 IPR001227 Acyl transferase domain superfamily PF552_15010 IPR014043 Acyl transferase PF552_15010 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PF552_15010 IPR024925 Malonyl CoA-acyl carrier protein transacylase PF552_15010 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PF552_15015 IPR002677 Ribosomal protein L32p PF552_15015 IPR011332 Zinc-binding ribosomal protein PF552_15020 IPR003772 Large ribosomal RNA subunit accumulation protein YceD PF552_15020 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria PF552_15025 IPR007411 Elongation factor P hydroxylase PF552_15030 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PF552_15030 IPR006070 YrdC-like domain PF552_15035 IPR003768 Segregation and condensation protein A PF552_15040 IPR036390 Winged helix DNA-binding domain superfamily PF552_15040 IPR005234 Chromosome segregation/condensation protein ScpB PF552_15040 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_15045 IPR036986 RNA-binding S4 domain superfamily PF552_15045 IPR002942 RNA-binding S4 domain PF552_15045 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PF552_15045 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PF552_15045 IPR006145 Pseudouridine synthase, RsuA/RluA PF552_15045 IPR020103 Pseudouridine synthase, catalytic domain superfamily PF552_15045 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PF552_15050 IPR004472 Dethiobiotin synthase BioD PF552_15050 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_15055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_15055 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC PF552_15060 IPR015424 Pyridoxal phosphate-dependent transferase PF552_15060 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type PF552_15060 IPR004839 Aminotransferase, class I/classII PF552_15060 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_15060 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PF552_15060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_15065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_15065 IPR015424 Pyridoxal phosphate-dependent transferase PF552_15065 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA PF552_15065 IPR010722 Biotin and thiamin synthesis-associated domain PF552_15065 IPR005814 Aminotransferase class-III PF552_15065 IPR013785 Aldolase-type TIM barrel PF552_15065 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB PF552_15065 IPR006638 Elp3/MiaB/NifB PF552_15065 IPR007197 Radical SAM PF552_15065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_15070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_15070 IPR013216 Methyltransferase type 11 PF552_15070 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC PF552_15070 IPR000073 Alpha/beta hydrolase fold-1 PF552_15070 IPR029058 Alpha/Beta hydrolase fold PF552_15080 IPR012766 Alpha,alpha-trehalose-phosphate synthase PF552_15080 IPR001830 Glycosyl transferase, family 20 PF552_15085 IPR036259 MFS transporter superfamily PF552_15085 IPR011701 Major facilitator superfamily PF552_15085 IPR020846 Major facilitator superfamily domain PF552_15090 IPR009078 Ferritin-like superfamily PF552_15090 IPR008331 Ferritin/DPS protein domain PF552_15090 IPR009040 Ferritin-like diiron domain PF552_15090 IPR012347 Ferritin-like PF552_15090 IPR002024 Bacterioferritin PF552_15095 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type PF552_15095 IPR012340 Nucleic acid-binding, OB-fold PF552_15095 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PF552_15095 IPR004150 NAD-dependent DNA ligase, OB-fold PF552_15095 IPR013840 NAD-dependent DNA ligase, N-terminal PF552_15095 IPR010994 RuvA domain 2-like PF552_15095 IPR001679 NAD-dependent DNA ligase PF552_15095 IPR001357 BRCT domain PF552_15095 IPR033136 NAD-dependent DNA ligase, conserved site PF552_15095 IPR018239 NAD-dependent DNA ligase, active site PF552_15095 IPR041663 DisA/LigA, helix-hairpin-helix motif PF552_15095 IPR036420 BRCT domain superfamily PF552_15095 IPR013839 NAD-dependent DNA ligase, adenylation PF552_15105 IPR011890 Structural maintenance of chromosomes protein, prokaryotic PF552_15105 IPR036277 SMCs flexible hinge superfamily PF552_15105 IPR010935 SMCs flexible hinge PF552_15105 IPR024704 Structural maintenance of chromosomes protein PF552_15105 IPR003395 RecF/RecN/SMC, N-terminal PF552_15105 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_15115 IPR002781 Transmembrane protein TauE-like PF552_15125 IPR004619 Type III pantothenate kinase PF552_15130 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily PF552_15130 IPR022941 Signal recognition particle, SRP54 subunit PF552_15130 IPR004780 Signal recognition particle protein PF552_15130 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PF552_15130 IPR013822 Signal recognition particle SRP54, helical bundle PF552_15130 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily PF552_15130 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_15130 IPR003593 AAA+ ATPase domain PF552_15130 IPR004125 Signal recognition particle, SRP54 subunit, M-domain PF552_15140 IPR013785 Aldolase-type TIM barrel PF552_15140 IPR035587 DUS-like, FMN-binding domain PF552_15140 IPR032886 tRNA-dihydrouridine(16) synthase PF552_15140 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal PF552_15140 IPR001269 tRNA-dihydrouridine synthase PF552_15140 IPR018517 tRNA-dihydrouridine synthase, conserved site PF552_15170 IPR033704 dUTPase, trimeric PF552_15170 IPR029054 dUTPase-like PF552_15170 IPR011962 dCTP deaminase PF552_15170 IPR036157 dUTPase-like superfamily PF552_15185 IPR010049 MTA/SAH nucleosidase PF552_15185 IPR000845 Nucleoside phosphorylase domain PF552_15185 IPR035994 Nucleoside phosphorylase superfamily PF552_15190 IPR034904 Fe-S cluster assembly domain superfamily PF552_15190 IPR019591 Mrp/NBP35 ATP-binding protein PF552_15190 IPR000808 Mrp, conserved site PF552_15190 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_15190 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 PF552_15200 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PF552_15200 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain PF552_15200 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PF552_15200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_15200 IPR012340 Nucleic acid-binding, OB-fold PF552_15200 IPR029038 Methionyl-tRNA synthetase, Zn-domain PF552_15200 IPR033911 Methioninyl-tRNA synthetase core domain PF552_15200 IPR015413 Methionyl/Leucyl tRNA synthetase PF552_15200 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal PF552_15200 IPR023458 Methionine-tRNA ligase, type 1 PF552_15200 IPR014758 Methionyl-tRNA synthetase PF552_15200 IPR002547 tRNA-binding domain PF552_15225 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PF552_15230 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase PF552_15230 IPR001926 Pyridoxal-phosphate dependent enzyme PF552_15230 IPR005966 D-cysteine desulfhydrase PF552_15230 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PF552_15235 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like PF552_15235 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_15235 IPR023166 HI0933-like insert domain superfamily PF552_15245 IPR008910 Conserved TM helix PF552_15260 IPR033892 Ferredoxin--NADP reductase, bacteria PF552_15260 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PF552_15260 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PF552_15260 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_15260 IPR017938 Riboflavin synthase-like beta-barrel PF552_15260 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_15260 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_15265 IPR005119 LysR, substrate-binding PF552_15265 IPR000847 Transcription regulator HTH, LysR PF552_15265 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_15265 IPR036390 Winged helix DNA-binding domain superfamily PF552_15275 IPR012340 Nucleic acid-binding, OB-fold PF552_15275 IPR002059 Cold-shock protein, DNA-binding PF552_15275 IPR019844 Cold-shock (CSD) domain PF552_15275 IPR011129 Cold shock domain PF552_15275 IPR012156 Cold shock, CspA PF552_15280 IPR000836 Phosphoribosyltransferase domain PF552_15280 IPR029057 Phosphoribosyltransferase-like PF552_15280 IPR034332 Uracil phosphoribosyltransferase, bacterial-type PF552_15280 IPR005765 Uracil phosphoribosyl transferase PF552_15285 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 PF552_15285 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PF552_15290 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PF552_15290 IPR010227 NADH-quinone oxidoreductase, chain M/4 PF552_15290 IPR003918 NADH:ubiquinone oxidoreductase PF552_15295 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PF552_15295 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup PF552_15295 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal PF552_15295 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 PF552_15300 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K PF552_15300 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like PF552_15305 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 PF552_15305 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ PF552_15310 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PF552_15310 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PF552_15310 IPR010226 NADH-quinone oxidoreductase, chain I PF552_15315 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site PF552_15315 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H PF552_15320 IPR010228 NADH:ubiquinone oxidoreductase, subunit G PF552_15320 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding PF552_15320 IPR036010 2Fe-2S ferredoxin-like superfamily PF552_15320 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PF552_15320 IPR009010 Aspartate decarboxylase-like domain superfamily PF552_15320 IPR006656 Molybdopterin oxidoreductase PF552_15320 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PF552_15320 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site PF552_15325 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain PF552_15325 IPR019554 Soluble ligand binding domain PF552_15325 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily PF552_15325 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily PF552_15325 IPR011537 NADH ubiquinone oxidoreductase, F subunit PF552_15325 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site PF552_15325 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain PF552_15330 IPR002023 NADH-quinone oxidoreductase subunit E-like PF552_15330 IPR042128 NuoE domain PF552_15330 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal PF552_15330 IPR036249 Thioredoxin-like superfamily PF552_15335 IPR001135 NADH-quinone oxidoreductase, subunit D PF552_15335 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site PF552_15335 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit PF552_15335 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily PF552_15335 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily PF552_15335 IPR010218 NADH dehydrogenase, subunit C PF552_15335 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site PF552_15335 IPR029014 [NiFe]-hydrogenase, large subunit PF552_15335 IPR023062 NADH dehydrogenase, subunit CD PF552_15335 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H PF552_15340 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit PF552_15340 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit PF552_15345 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 PF552_15345 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily PF552_15345 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid PF552_15350 IPR033416 Periplasmic sensor domain CHASE7 PF552_15350 IPR000160 GGDEF domain PF552_15350 IPR029787 Nucleotide cyclase PF552_15360 IPR003660 HAMP domain PF552_15360 IPR003594 Histidine kinase/HSP90-like ATPase PF552_15360 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_15360 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_15360 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_15360 IPR005467 Histidine kinase domain PF552_15360 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_15365 IPR011006 CheY-like superfamily PF552_15365 IPR001867 OmpR/PhoB-type DNA-binding domain PF552_15365 IPR016032 Signal transduction response regulator, C-terminal effector PF552_15365 IPR001789 Signal transduction response regulator, receiver domain PF552_15365 IPR039420 Transcriptional regulatory protein WalR-like PF552_15365 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_15375 IPR039718 Ribonucleoside-diphosphate reductase large subunit PF552_15375 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal PF552_15375 IPR000788 Ribonucleotide reductase large subunit, C-terminal PF552_15375 IPR013346 Ribonucleotide reductase, class I , alpha subunit PF552_15375 IPR013509 Ribonucleotide reductase large subunit, N-terminal PF552_15375 IPR005144 ATP-cone domain PF552_15385 IPR000358 Ribonucleotide reductase small subunit family PF552_15385 IPR033909 Ribonucleotide reductase small subunit PF552_15385 IPR012348 Ribonucleotide reductase-like PF552_15385 IPR009078 Ferritin-like superfamily PF552_15390 IPR000620 EamA domain PF552_15395 IPR023793 2-keto-4-pentenoate hydratase PF552_15395 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily PF552_15395 IPR011234 Fumarylacetoacetase-like, C-terminal PF552_15400 IPR002563 Flavin reductase like domain PF552_15400 IPR012349 FMN-binding split barrel PF552_15405 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A PF552_15405 IPR036661 Luciferase-like domain superfamily PF552_15405 IPR011251 Luciferase-like domain PF552_15410 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_15410 IPR015590 Aldehyde dehydrogenase domain PF552_15410 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_15410 IPR016161 Aldehyde/histidinol dehydrogenase PF552_15415 IPR015376 Zinc ribbon, NADH pyrophosphatase PF552_15415 IPR000086 NUDIX hydrolase domain PF552_15415 IPR020084 NUDIX hydrolase, conserved site PF552_15415 IPR015797 NUDIX hydrolase-like domain superfamily PF552_15415 IPR022925 NADH pyrophosphatase NudC PF552_15425 IPR005828 Major facilitator, sugar transporter-like PF552_15425 IPR020846 Major facilitator superfamily domain PF552_15425 IPR005829 Sugar transporter, conserved site PF552_15425 IPR036259 MFS transporter superfamily PF552_15435 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_15435 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PF552_15435 IPR036291 NAD(P)-binding domain superfamily PF552_15435 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_15440 IPR036165 YefM-like superfamily PF552_15440 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PF552_15455 IPR003719 Phenazine biosynthesis PhzF protein PF552_15505 IPR012349 FMN-binding split barrel PF552_15505 IPR019917 FMN reductase (NADH) RutF PF552_15505 IPR002563 Flavin reductase like domain PF552_15510 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal PF552_15510 IPR038071 UROD/MetE-like superfamily PF552_15510 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal PF552_15510 IPR006276 Cobalamin-independent methionine synthase PF552_15520 IPR005119 LysR, substrate-binding PF552_15520 IPR000847 Transcription regulator HTH, LysR PF552_15520 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_15520 IPR036390 Winged helix DNA-binding domain superfamily PF552_15525 IPR001123 Amino acid exporter protein, LeuE-type PF552_15530 IPR000847 Transcription regulator HTH, LysR PF552_15530 IPR036390 Winged helix DNA-binding domain superfamily PF552_15530 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_15530 IPR005119 LysR, substrate-binding PF552_15535 IPR005829 Sugar transporter, conserved site PF552_15535 IPR004736 MFS transporter, metabolite:H symporter PF552_15535 IPR036259 MFS transporter superfamily PF552_15535 IPR020846 Major facilitator superfamily domain PF552_15535 IPR011701 Major facilitator superfamily PF552_15545 IPR005119 LysR, substrate-binding PF552_15545 IPR000847 Transcription regulator HTH, LysR PF552_15545 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_15545 IPR036390 Winged helix DNA-binding domain superfamily PF552_15550 IPR010960 Flavocytochrome c PF552_15550 IPR011031 Multihaem cytochrome PF552_15550 IPR036280 Multiheme cytochrome superfamily PF552_15550 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily PF552_15550 IPR012286 Tetrahaem cytochrome domain PF552_15550 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_15550 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PF552_15555 IPR012830 Citrate utilization protein B PF552_15555 IPR036197 NarG-like superfamily PF552_15560 IPR023606 CoA-transferase family III domain superfamily PF552_15560 IPR003673 CoA-transferase family III PF552_15565 IPR005829 Sugar transporter, conserved site PF552_15565 IPR036259 MFS transporter superfamily PF552_15565 IPR020846 Major facilitator superfamily domain PF552_15565 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family PF552_15565 IPR011701 Major facilitator superfamily PF552_15570 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_15570 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_15570 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_15570 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_15570 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_15570 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_15570 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_15575 IPR036390 Winged helix DNA-binding domain superfamily PF552_15575 IPR005119 LysR, substrate-binding PF552_15575 IPR000847 Transcription regulator HTH, LysR PF552_15575 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_15580 IPR013149 Alcohol dehydrogenase, C-terminal PF552_15580 IPR013154 Alcohol dehydrogenase, N-terminal PF552_15580 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PF552_15580 IPR011032 GroES-like superfamily PF552_15580 IPR036291 NAD(P)-binding domain superfamily PF552_15580 IPR020843 Polyketide synthase, enoylreductase domain PF552_15585 IPR032466 Metal-dependent hydrolase PF552_15585 IPR001365 Adenosine/AMP deaminase domain PF552_15585 IPR006330 Adenosine/adenine deaminase PF552_15585 IPR006650 Adenosine/AMP deaminase active site PF552_15585 IPR028893 Adenosine deaminase PF552_15610 IPR023513 Quinolinate synthase A, type 1 PF552_15610 IPR036094 Quinolinate synthetase A superfamily PF552_15610 IPR003473 Quinolinate synthetase A PF552_15615 IPR016117 ArgJ-like domain superfamily PF552_15615 IPR002813 Arginine biosynthesis protein ArgJ PF552_15615 IPR042195 ArgJ beta chain, C-terminal domain PF552_15620 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily PF552_15620 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding PF552_15620 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain PF552_15620 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain PF552_15620 IPR023546 Methylated-DNA--protein-cysteine methyltransferase PF552_15620 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_15620 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site PF552_15625 IPR000390 Small multidrug resistance protein family PF552_15640 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PF552_15640 IPR006311 Twin-arginine translocation pathway, signal sequence PF552_15640 IPR034279 Copper resistance protein, third cupredoxin domain PF552_15640 IPR034282 Copper resistance protein CopA, second cupredoxin domain PF552_15640 IPR034284 Copper resistance protein, first cupredoxin domain PF552_15640 IPR006376 Copper-resistance protein CopA PF552_15640 IPR002355 Multicopper oxidase, copper-binding site PF552_15640 IPR008972 Cupredoxin PF552_15640 IPR011706 Multicopper oxidase, type 2 PF552_15640 IPR001117 Multicopper oxidase, type 1 PF552_15640 IPR033138 Multicopper oxidases, conserved site PF552_15640 IPR011707 Multicopper oxidase, type 3 PF552_15650 IPR000150 Cof family PF552_15650 IPR036412 HAD-like superfamily PF552_15650 IPR006379 HAD-superfamily hydrolase, subfamily IIB PF552_15650 IPR023214 HAD superfamily PF552_15655 IPR011060 Ribulose-phosphate binding barrel PF552_15655 IPR026019 Ribulose-phosphate 3-epimerase PF552_15655 IPR013785 Aldolase-type TIM barrel PF552_15655 IPR000056 Ribulose-phosphate 3-epimerase-like PF552_15665 IPR029058 Alpha/Beta hydrolase fold PF552_15665 IPR014186 S-formylglutathione hydrolase PF552_15665 IPR000801 Putative esterase PF552_15675 IPR007536 Ribosomal RNA small subunit methyltransferase J PF552_15675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_15680 IPR000905 Gcp-like domain PF552_15680 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB PF552_15685 IPR001451 Hexapeptide repeat PF552_15685 IPR011004 Trimeric LpxA-like superfamily PF552_15690 IPR023735 Uncharacterised nudix hydrolase NudL PF552_15690 IPR000059 NUDIX hydrolase, NudL, conserved site PF552_15690 IPR015797 NUDIX hydrolase-like domain superfamily PF552_15690 IPR000086 NUDIX hydrolase domain PF552_15735 IPR005802 Aminodeoxychorismate synthase, component I PF552_15735 IPR005801 ADC synthase PF552_15735 IPR019999 Anthranilate synthase component I-like PF552_15735 IPR006805 Anthranilate synthase component I, N-terminal PF552_15735 IPR015890 Chorismate-utilising enzyme, C-terminal PF552_15740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_15740 IPR004839 Aminotransferase, class I/classII PF552_15740 IPR015424 Pyridoxal phosphate-dependent transferase PF552_15740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_15740 IPR005861 Histidinol-phosphate aminotransferase family PF552_15745 IPR016161 Aldehyde/histidinol dehydrogenase PF552_15745 IPR001692 Histidinol dehydrogenase, conserved site PF552_15745 IPR022695 Histidinol dehydrogenase, monofunctional PF552_15745 IPR012131 Histidinol dehydrogenase PF552_15750 IPR024893 ATP phosphoribosyltransferase HisG, short form PF552_15750 IPR018198 ATP phosphoribosyltransferase, conserved site PF552_15750 IPR001348 ATP phosphoribosyltransferase HisG PF552_15750 IPR013820 ATP phosphoribosyltransferase, catalytic domain PF552_15755 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase PF552_15755 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta PF552_15755 IPR001986 Enolpyruvate transferase domain PF552_15755 IPR020683 Ankyrin repeat-containing domain PF552_15755 IPR002110 Ankyrin repeat PF552_15755 IPR036968 Enolpyruvate transferase domain superfamily PF552_15760 IPR002634 BolA protein PF552_15760 IPR036065 BolA-like superfamily PF552_15765 IPR003489 Ribosome hibernation promoting factor/RaiA PF552_15765 IPR036567 Ribosome hibernation promotion factor-like PF552_15770 IPR000394 RNA polymerase sigma factor 54 PF552_15770 IPR007046 RNA polymerase sigma factor 54, core-binding domain PF552_15770 IPR007634 RNA polymerase sigma factor 54, DNA-binding PF552_15770 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily PF552_15815 IPR036526 Carbon-nitrogen hydrolase superfamily PF552_15815 IPR001110 Uncharacterised protein family UPF0012, conserved site PF552_15815 IPR003010 Carbon-nitrogen hydrolase PF552_15825 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_15825 IPR036390 Winged helix DNA-binding domain superfamily PF552_15825 IPR000835 MarR-type HTH domain PF552_15830 IPR015946 K homology domain-like, alpha/beta PF552_15830 IPR019953 Organic hydroperoxide resistance protein famiy PF552_15830 IPR003718 OsmC/Ohr family PF552_15830 IPR036102 OsmC/Ohr superfamily PF552_15835 IPR001482 Type II/IV secretion system protein PF552_15835 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_15835 IPR037257 General secretory system II, protein E, N-terminal superfamily PF552_15835 IPR013369 Type II secretion system GspE PF552_15835 IPR042181 Type II secretion system, protein E, N-terminal PF552_15855 IPR008918 Helix-hairpin-helix motif, class 2 PF552_15855 IPR029060 PIN-like domain superfamily PF552_15855 IPR036397 Ribonuclease H superfamily PF552_15855 IPR002298 DNA polymerase A PF552_15855 IPR012337 Ribonuclease H-like superfamily PF552_15855 IPR018320 DNA polymerase 1 PF552_15855 IPR020045 DNA polymerase I-like, H3TH domain PF552_15855 IPR001098 DNA-directed DNA polymerase, family A, palm domain PF552_15855 IPR019760 DNA-directed DNA polymerase, family A, conserved site PF552_15855 IPR036279 5'-3' exonuclease, C-terminal domain superfamily PF552_15855 IPR002421 5'-3' exonuclease, N-terminal PF552_15855 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal PF552_15855 IPR002562 3'-5' exonuclease domain PF552_15860 IPR003425 CCB3/YggT PF552_15865 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PF552_15865 IPR036291 NAD(P)-binding domain superfamily PF552_15865 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_15865 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain PF552_15865 IPR000304 Pyrroline-5-carboxylate reductase PF552_15870 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal PF552_15870 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain PF552_15870 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PF552_15870 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal PF552_15870 IPR012094 tRNA(Ile)-lysidine synthase PF552_15870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_15875 IPR001095 Acetyl-CoA carboxylase, alpha subunit PF552_15875 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal PF552_15875 IPR029045 ClpP/crotonase-like domain superfamily PF552_15880 IPR003695 Ppx/GppA phosphatase PF552_15880 IPR030673 Pyrophosphatase, GppA/Ppx-type PF552_15880 IPR022371 Exopolyphosphatase PF552_15885 IPR005746 Thioredoxin PF552_15885 IPR036249 Thioredoxin-like superfamily PF552_15885 IPR017937 Thioredoxin, conserved site PF552_15885 IPR013766 Thioredoxin domain PF552_15890 IPR003593 AAA+ ATPase domain PF552_15890 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PF552_15890 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_15890 IPR012340 Nucleic acid-binding, OB-fold PF552_15890 IPR041703 Transcription termination factor Rho, ATP binding domain PF552_15890 IPR011112 Rho termination factor, N-terminal PF552_15890 IPR036269 Rho termination factor, N-terminal domain superfamily PF552_15890 IPR011113 Rho termination factor, RNA-binding domain PF552_15890 IPR004665 Transcription termination factor Rho PF552_15890 IPR011129 Cold shock domain PF552_15905 IPR000119 Histone-like DNA-binding protein PF552_15905 IPR020816 Histone-like DNA-binding protein, conserved site PF552_15905 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily PF552_15905 IPR005684 Integration host factor, alpha subunit PF552_15910 IPR005147 tRNA synthetase, B5-domain PF552_15910 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain PF552_15910 IPR002547 tRNA-binding domain PF552_15910 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain PF552_15910 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PF552_15910 IPR009061 Putative DNA-binding domain superfamily PF552_15910 IPR012340 Nucleic acid-binding, OB-fold PF552_15910 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily PF552_15910 IPR005121 Ferrodoxin-fold anticodon-binding domain PF552_15910 IPR005146 B3/B4 tRNA-binding domain PF552_15910 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit PF552_15915 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm PF552_15915 IPR002319 Phenylalanyl-tRNA synthetase PF552_15915 IPR006195 Aminoacyl-tRNA synthetase, class II PF552_15915 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal PF552_15915 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit PF552_15915 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial PF552_15935 IPR005813 Ribosomal protein L20 PF552_15935 IPR035566 Ribosomal protein L20, C-terminal PF552_15940 IPR021137 Ribosomal protein L35 PF552_15940 IPR018265 Ribosomal protein L35, conserved site PF552_15940 IPR001706 Ribosomal protein L35, non-mitochondrial PF552_15940 IPR037229 Ribosomal protein L35 superfamily PF552_15950 IPR036259 MFS transporter superfamily PF552_15950 IPR004751 Drug antiporter protein PF552_15950 IPR011701 Major facilitator superfamily PF552_15950 IPR020846 Major facilitator superfamily domain PF552_15955 IPR032816 SNARE associated Golgi protein PF552_15960 IPR010987 Glutathione S-transferase, C-terminal-like PF552_15960 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PF552_15960 IPR004045 Glutathione S-transferase, N-terminal PF552_15960 IPR004046 Glutathione S-transferase, C-terminal PF552_15960 IPR036249 Thioredoxin-like superfamily PF552_15965 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily PF552_15965 IPR001288 Translation initiation factor 3 PF552_15965 IPR019815 Translation initiation factor 3, C-terminal PF552_15965 IPR019814 Translation initiation factor 3, N-terminal PF552_15965 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily PF552_15970 IPR036621 Anticodon-binding domain superfamily PF552_15970 IPR033728 Threonine-tRNA ligase catalytic core domain PF552_15970 IPR012947 Threonyl/alanyl tRNA synthetase, SAD PF552_15970 IPR004154 Anticodon-binding PF552_15970 IPR012676 TGS-like PF552_15970 IPR004095 TGS PF552_15970 IPR002320 Threonine-tRNA ligase, class IIa PF552_15970 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily PF552_15970 IPR006195 Aminoacyl-tRNA synthetase, class II PF552_15970 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) PF552_15970 IPR012675 Beta-grasp domain superfamily PF552_15975 IPR042099 AMP-dependent synthetase-like superfamily PF552_15975 IPR020845 AMP-binding, conserved site PF552_15975 IPR025110 AMP-binding enzyme, C-terminal domain PF552_15975 IPR000873 AMP-dependent synthetase/ligase PF552_15980 IPR006839 Ribosome-associated, YjgA PF552_15980 IPR023153 PSPTO4464-like domain superfamily PF552_15985 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PF552_15985 IPR035895 HPr-like superfamily PF552_15985 IPR000032 Phosphocarrier protein HPr-like PF552_15985 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PF552_15990 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_15990 IPR005337 RapZ-like family PF552_15995 IPR004821 Cytidyltransferase-like domain PF552_15995 IPR003721 Pantoate-beta-alanine ligase PF552_15995 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain PF552_15995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_16000 IPR040442 Pyruvate kinase-like domain superfamily PF552_16000 IPR003700 Ketopantoate hydroxymethyltransferase PF552_16000 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PF552_16005 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK PF552_16005 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily PF552_16010 IPR002646 Poly A polymerase, head domain PF552_16010 IPR010206 Poly(A) polymerase I PF552_16010 IPR025866 Polymerase A arginine-rich C-terminal domain PF552_16010 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PF552_16015 IPR004509 Competence protein ComEA, helix-hairpin-helix domain PF552_16015 IPR010994 RuvA domain 2-like PF552_16020 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PF552_16020 IPR011551 NTP pyrophosphohydrolase MazG PF552_16025 IPR036291 NAD(P)-binding domain superfamily PF552_16025 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_16025 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_16030 IPR012676 TGS-like PF552_16030 IPR002912 ACT domain PF552_16030 IPR004095 TGS PF552_16030 IPR007685 RelA/SpoT PF552_16030 IPR004811 RelA/SpoT family PF552_16030 IPR003607 HD/PDEase domain PF552_16030 IPR012675 Beta-grasp domain superfamily PF552_16030 IPR033655 RelA, TGS domain PF552_16035 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD PF552_16035 IPR010280 (Uracil-5)-methyltransferase family PF552_16035 IPR002792 TRAM domain PF552_16035 IPR030390 RNA methyltransferase TrmA, active site PF552_16035 IPR012340 Nucleic acid-binding, OB-fold PF552_16035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_16045 IPR001926 Pyridoxal-phosphate dependent enzyme PF552_16045 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site PF552_16045 IPR005858 Cysteine synthase CysM PF552_16045 IPR005856 Cysteine synthase PF552_16045 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PF552_16050 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_16050 IPR003594 Histidine kinase/HSP90-like ATPase PF552_16050 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_16050 IPR001789 Signal transduction response regulator, receiver domain PF552_16050 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PF552_16050 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_16050 IPR036641 HPT domain superfamily PF552_16050 IPR019247 Histidine kinase BarA, N-terminal PF552_16050 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_16050 IPR005467 Histidine kinase domain PF552_16050 IPR003660 HAMP domain PF552_16050 IPR011006 CheY-like superfamily PF552_16055 IPR001753 Enoyl-CoA hydratase/isomerase PF552_16055 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PF552_16055 IPR029045 ClpP/crotonase-like domain superfamily PF552_16060 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site PF552_16060 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain PF552_16060 IPR036291 NAD(P)-binding domain superfamily PF552_16060 IPR015815 3-hydroxyisobutyrate dehydrogenase-related PF552_16060 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PF552_16060 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PF552_16060 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_16065 IPR026040 Hydroxypyruvate isomerase-like PF552_16065 IPR036237 Xylose isomerase-like superfamily PF552_16065 IPR013022 Xylose isomerase-like, TIM barrel domain PF552_16070 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PF552_16080 IPR036291 NAD(P)-binding domain superfamily PF552_16080 IPR005979 Light-dependent protochlorophyllide reductase PF552_16080 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_16085 IPR029035 DHS-like NAD/FAD-binding domain superfamily PF552_16085 IPR012136 NADP transhydrogenase, beta subunit PF552_16085 IPR034300 NADP transhydrogenase beta-like domain PF552_16090 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal PF552_16095 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 PF552_16095 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 PF552_16095 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PF552_16095 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PF552_16095 IPR036291 NAD(P)-binding domain superfamily PF552_16100 IPR000620 EamA domain PF552_16110 IPR011701 Major facilitator superfamily PF552_16110 IPR020846 Major facilitator superfamily domain PF552_16110 IPR036259 MFS transporter superfamily PF552_16120 IPR011546 Peptidase M41, FtsH extracellular PF552_16120 IPR000642 Peptidase M41 PF552_16120 IPR037219 Peptidase M41-like PF552_16120 IPR005936 Peptidase, FtsH PF552_16120 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_16120 IPR003959 ATPase, AAA-type, core PF552_16120 IPR003960 ATPase, AAA-type, conserved site PF552_16120 IPR003593 AAA+ ATPase domain PF552_16120 IPR041569 AAA ATPase, AAA+ lid domain PF552_16135 IPR003753 Exonuclease VII, large subunit PF552_16135 IPR020579 Exonuclease VII, large subunit, C-terminal PF552_16135 IPR025824 OB-fold nucleic acid binding domain PF552_16150 IPR037026 Vgr protein, OB-fold domain superfamily PF552_16150 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PF552_16150 IPR006531 Gp5 N-terminal PF552_16150 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PF552_16150 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PF552_16150 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PF552_16185 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_16185 IPR012910 TonB-dependent receptor, plug domain PF552_16185 IPR011662 Secretin/TonB, short N-terminal domain PF552_16185 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_16185 IPR010105 TonB-dependent siderophore receptor PF552_16185 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_16185 IPR039423 TonB-dependent receptor-like PF552_16185 IPR010917 TonB-dependent receptor, conserved site PF552_16190 IPR010917 TonB-dependent receptor, conserved site PF552_16190 IPR012910 TonB-dependent receptor, plug domain PF552_16190 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_16190 IPR039423 TonB-dependent receptor-like PF552_16190 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_16190 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_16190 IPR010105 TonB-dependent siderophore receptor PF552_16205 IPR002585 Cytochrome ubiquinol oxidase subunit 1 PF552_16210 IPR003317 Cytochrome ubiquinol oxidase subunit 2 PF552_16275 IPR035069 TTHA1013/TTHA0281-like PF552_16275 IPR011010 DNA breaking-rejoining enzyme, catalytic core PF552_16275 IPR013762 Integrase-like, catalytic domain superfamily PF552_16275 IPR002104 Integrase, catalytic domain PF552_16275 IPR010998 Integrase/recombinase, N-terminal PF552_16280 IPR013785 Aldolase-type TIM barrel PF552_16280 IPR035587 DUS-like, FMN-binding domain PF552_16280 IPR004653 tRNA-dihydrouridine(20/20a) synthase PF552_16280 IPR001269 tRNA-dihydrouridine synthase PF552_16280 IPR018517 tRNA-dihydrouridine synthase, conserved site PF552_16290 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain PF552_16290 IPR000847 Transcription regulator HTH, LysR PF552_16290 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_16290 IPR036390 Winged helix DNA-binding domain superfamily PF552_16290 IPR005119 LysR, substrate-binding PF552_16300 IPR000594 THIF-type NAD/FAD binding fold PF552_16300 IPR035985 Ubiquitin-activating enzyme PF552_16305 IPR036008 Aconitase, iron-sulfur domain PF552_16305 IPR018136 Aconitase family, 4Fe-4S cluster binding site PF552_16305 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain PF552_16305 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PF552_16305 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain PF552_16305 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PF552_16305 IPR006249 Aconitase/Iron-responsive element-binding protein 2 PF552_16310 IPR018228 Deoxyribonuclease, TatD-related, conserved site PF552_16310 IPR015991 Uncharacterised hydrolase TatD-type PF552_16310 IPR032466 Metal-dependent hydrolase PF552_16310 IPR001130 TatD family PF552_16325 IPR041732 Peptide chain release factor 3, GTP-binding domain PF552_16325 IPR009000 Translation protein, beta-barrel domain superfamily PF552_16325 IPR000795 Transcription factor, GTP-binding domain PF552_16325 IPR005225 Small GTP-binding protein domain PF552_16325 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily PF552_16325 IPR004161 Translation elongation factor EFTu-like, domain 2 PF552_16325 IPR004548 Peptide chain release factor 3 PF552_16325 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_16325 IPR031157 Tr-type G domain, conserved site PF552_16325 IPR035647 EF-G domain III/V-like PF552_16325 IPR032090 Peptide chain release factor 3, C-terminal PF552_16350 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_16350 IPR013023 Ketol-acid reductoisomerase PF552_16350 IPR000506 Ketol-acid reductoisomerase, C-terminal PF552_16350 IPR013116 Ketol-acid reductoisomerase, N-terminal PF552_16350 IPR014359 Ketol-acid reductoisomerase, prokaryotic PF552_16350 IPR036291 NAD(P)-binding domain superfamily PF552_16355 IPR039557 AHAS, ACT domain PF552_16355 IPR004789 Acetolactate synthase, small subunit PF552_16355 IPR019455 Acetolactate synthase, small subunit, C-terminal PF552_16355 IPR002912 ACT domain PF552_16355 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal PF552_16360 IPR029035 DHS-like NAD/FAD-binding domain superfamily PF552_16360 IPR029061 Thiamin diphosphate-binding fold PF552_16360 IPR012000 Thiamine pyrophosphate enzyme, central domain PF552_16360 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PF552_16360 IPR000399 TPP-binding enzyme, conserved site PF552_16360 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PF552_16360 IPR012846 Acetolactate synthase, large subunit, biosynthetic PF552_16360 IPR039368 Acetolactate synthase large subunit, TPP binding domain PF552_16370 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PF552_16370 IPR015413 Methionyl/Leucyl tRNA synthetase PF552_16370 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PF552_16370 IPR025709 Leucyl-tRNA synthetase, editing domain PF552_16370 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PF552_16370 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PF552_16370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_16370 IPR002302 Leucine-tRNA ligase PF552_16370 IPR002300 Aminoacyl-tRNA synthetase, class Ia PF552_16385 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PF552_16385 IPR030190 Macrolide export protein MacA PF552_16385 IPR006143 RND efflux pump, membrane fusion protein PF552_16390 IPR003593 AAA+ ATPase domain PF552_16390 IPR003838 ABC transporter permease protein domain PF552_16390 IPR003439 ABC transporter-like PF552_16390 IPR017871 ABC transporter, conserved site PF552_16390 IPR025857 MacB-like periplasmic core domain PF552_16390 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_16390 IPR017911 ABC transporter, macrolide export, ATP-binding domain PF552_16395 IPR003423 Outer membrane efflux protein PF552_16395 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PF552_16400 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_16400 IPR036291 NAD(P)-binding domain superfamily PF552_16400 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) PF552_16410 IPR012337 Ribonuclease H-like superfamily PF552_16410 IPR022894 Oligoribonuclease PF552_16410 IPR013520 Exonuclease, RNase T/DNA polymerase III PF552_16410 IPR036397 Ribonuclease H superfamily PF552_16415 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain PF552_16415 IPR012340 Nucleic acid-binding, OB-fold PF552_16415 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_16415 IPR004881 Ribosome biogenesis GTPase RsgA PF552_16415 IPR010914 RsgA GTPase domain PF552_16425 IPR014025 Glutaredoxin subgroup PF552_16425 IPR036249 Thioredoxin-like superfamily PF552_16425 IPR011900 Glutaredoxin, GrxC PF552_16425 IPR002109 Glutaredoxin PF552_16425 IPR011767 Glutaredoxin active site PF552_16430 IPR035958 SecB-like superfamily PF552_16430 IPR003708 Bacterial protein export chaperone SecB PF552_16440 IPR005225 Small GTP-binding protein domain PF552_16440 IPR032859 GTPase Der, C-terminal KH-domain-like PF552_16440 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_16440 IPR015946 K homology domain-like, alpha/beta PF552_16440 IPR031166 EngA-type guanine nucleotide-binding (G) domain PF552_16440 IPR016484 GTP-binding protein EngA PF552_16440 IPR006073 GTP binding domain PF552_16445 IPR017687 Outer membrane protein assembly factor BamB PF552_16445 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PF552_16445 IPR002372 Pyrrolo-quinoline quinone repeat PF552_16445 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PF552_16445 IPR015943 WD40/YVTN repeat-like-containing domain superfamily PF552_16455 IPR006195 Aminoacyl-tRNA synthetase, class II PF552_16455 IPR004154 Anticodon-binding PF552_16455 IPR036621 Anticodon-binding domain superfamily PF552_16455 IPR015807 Histidine-tRNA ligase PF552_16455 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain PF552_16455 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit PF552_16460 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial PF552_16460 IPR011005 Dihydropteroate synthase-like PF552_16460 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type PF552_16465 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PF552_16465 IPR025194 Domain of unknown function DUF4115 PF552_16465 IPR001387 Cro/C1-type helix-turn-helix domain PF552_16470 IPR013360 Pilus biogenesis/stability type IV, PilW PF552_16470 IPR019734 Tetratricopeptide repeat PF552_16470 IPR011990 Tetratricopeptide-like helical domain superfamily PF552_16470 IPR013026 Tetratricopeptide repeat-containing domain PF552_16475 IPR013785 Aldolase-type TIM barrel PF552_16475 IPR040072 Methyltransferase (Class A) PF552_16475 IPR027492 Dual-specificity RNA methyltransferase RlmN PF552_16475 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr PF552_16475 IPR007197 Radical SAM PF552_16480 IPR023005 Nucleoside diphosphate kinase, active site PF552_16480 IPR001564 Nucleoside diphosphate kinase PF552_16480 IPR034907 Nucleoside diphosphate kinase-like domain PF552_16480 IPR036850 Nucleoside diphosphate kinase-like domain superfamily PF552_16485 IPR007479 ISC system FeS cluster assembly, IscX PF552_16485 IPR036762 IscX-like superfamily PF552_16490 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PF552_16490 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PF552_16495 IPR001296 Glycosyl transferase, family 1 PF552_16495 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PF552_16500 IPR001478 PDZ domain PF552_16500 IPR036034 PDZ superfamily PF552_16500 IPR004447 C-terminal-processing peptidase S41A PF552_16500 IPR005151 Tail specific protease PF552_16500 IPR020992 Tail specific protease, C-terminal PF552_16500 IPR040573 Tail specific protease, N-terminal domain PF552_16500 IPR029045 ClpP/crotonase-like domain superfamily PF552_16505 IPR022956 Beta-hexosaminidase, bacterial PF552_16505 IPR001764 Glycoside hydrolase, family 3, N-terminal PF552_16505 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily PF552_16505 IPR017853 Glycoside hydrolase superfamily PF552_16505 IPR019800 Glycoside hydrolase, family 3, active site PF552_16515 IPR029058 Alpha/Beta hydrolase fold PF552_16515 IPR000073 Alpha/beta hydrolase fold-1 PF552_16515 IPR000639 Epoxide hydrolase-like PF552_16515 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase PF552_16520 IPR016161 Aldehyde/histidinol dehydrogenase PF552_16520 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_16520 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_16520 IPR015590 Aldehyde dehydrogenase domain PF552_16520 IPR012134 Glutamate-5-semialdehyde dehydrogenase PF552_16520 IPR000965 GPR domain PF552_16520 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site PF552_16525 IPR016161 Aldehyde/histidinol dehydrogenase PF552_16525 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_16525 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_16525 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_16525 IPR015590 Aldehyde dehydrogenase domain PF552_16530 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_16530 IPR031322 Shikimate kinase/gluconokinase PF552_16530 IPR006001 Carbohydrate kinase, thermoresistant glucokinase PF552_16535 IPR003474 Gluconate transporter PF552_16540 IPR031337 KDPG/KHG aldolase, active site 1 PF552_16540 IPR000887 KDPG/KHG aldolase PF552_16540 IPR013785 Aldolase-type TIM barrel PF552_16540 IPR031338 KDPG/KHG aldolase, active site 2 PF552_16545 IPR037237 IlvD/EDD, N-terminal domain PF552_16545 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site PF552_16545 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase PF552_16545 IPR004786 6-phosphogluconate dehydratase PF552_16545 IPR042096 Dihydroxy-acid dehydratase, C-terminal PF552_16550 IPR004372 Acetate/propionate kinase PF552_16550 IPR000890 Aliphatic acid kinase, short-chain PF552_16550 IPR023865 Aliphatic acid kinase, short-chain, conserved site PF552_16555 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily PF552_16555 IPR042112 Phosphate acetyltransferase, domain 2 PF552_16555 IPR002505 Phosphate acetyl/butaryl transferase PF552_16555 IPR004614 Phosphate acetyltransferase PF552_16555 IPR042113 Phosphate acetyltransferase, domain 1 PF552_16555 IPR016475 Phosphate acetyltransferase, bacteria PF552_16555 IPR010766 DRTGG PF552_16555 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_16560 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily PF552_16560 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain PF552_16560 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain PF552_16560 IPR011167 Iron-dependent fumarate hydratase PF552_16560 IPR020557 Fumarate lyase, conserved site PF552_16575 IPR003593 AAA+ ATPase domain PF552_16575 IPR003959 ATPase, AAA-type, core PF552_16575 IPR019489 Clp ATPase, C-terminal PF552_16575 IPR004487 Clp protease, ATP-binding subunit ClpX PF552_16575 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_16575 IPR010603 Zinc finger, ClpX C4-type PF552_16575 IPR038366 Zinc finger, ClpX C4-type superfamily PF552_16580 IPR018215 ClpP, Ser active site PF552_16580 IPR033135 ClpP, histidine active site PF552_16580 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PF552_16580 IPR001907 ATP-dependent Clp protease proteolytic subunit PF552_16580 IPR029045 ClpP/crotonase-like domain superfamily PF552_16585 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PF552_16585 IPR005215 Trigger factor PF552_16585 IPR008880 Trigger factor, C-terminal PF552_16585 IPR037041 Trigger factor, C-terminal domain superfamily PF552_16585 IPR008881 Trigger factor, ribosome-binding, bacterial PF552_16585 IPR036611 Trigger factor ribosome-binding domain superfamily PF552_16585 IPR027304 Trigger factor/SurA domain superfamily PF552_16590 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_16590 IPR010105 TonB-dependent siderophore receptor PF552_16590 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_16590 IPR039423 TonB-dependent receptor-like PF552_16590 IPR012910 TonB-dependent receptor, plug domain PF552_16590 IPR030148 Catecholate siderophore receptor Fiu PF552_16590 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_16595 IPR005123 Oxoglutarate/iron-dependent dioxygenase PF552_16595 IPR041097 PKHD-type hydroxylase C-terminal domain PF552_16595 IPR023550 PKHD-type hydroxylase PF552_16595 IPR006620 Prolyl 4-hydroxylase, alpha subunit PF552_16600 IPR005668 2-isopropylmalate synthase PF552_16600 IPR039371 LeuA, N-terminal catalytic TIM barrel domain PF552_16600 IPR000891 Pyruvate carboxyltransferase PF552_16600 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain PF552_16600 IPR013785 Aldolase-type TIM barrel PF552_16600 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily PF552_16600 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site PF552_16605 IPR029058 Alpha/Beta hydrolase fold PF552_16605 IPR000073 Alpha/beta hydrolase fold-1 PF552_16605 IPR008220 Homoserine/serine acetyltransferase MetX-like PF552_16610 IPR029058 Alpha/Beta hydrolase fold PF552_16610 IPR000073 Alpha/beta hydrolase fold-1 PF552_16610 IPR008220 Homoserine/serine acetyltransferase MetX-like PF552_16610 IPR010743 Methionine biosynthesis MetW PF552_16610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_16620 IPR002637 Ham1-like protein PF552_16620 IPR029001 Inosine triphosphate pyrophosphatase-like PF552_16620 IPR020922 dITP/XTP pyrophosphatase PF552_16630 IPR006312 Sec-independent protein translocase protein TatA/E PF552_16630 IPR003369 Sec-independent protein translocase protein TatA/B/E PF552_16635 IPR003369 Sec-independent protein translocase protein TatA/B/E PF552_16635 IPR018448 Twin-arginine translocation protein TatB PF552_16640 IPR019820 Sec-independent periplasmic protein translocase, conserved site PF552_16640 IPR002033 Sec-independent periplasmic protein translocase TatC PF552_16660 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt PF552_16675 IPR020940 Thymidylate synthase, active site PF552_16675 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain PF552_16675 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily PF552_16675 IPR000398 Thymidylate synthase PF552_16680 IPR012259 Dihydrofolate reductase PF552_16680 IPR024072 Dihydrofolate reductase-like domain superfamily PF552_16680 IPR017925 Dihydrofolate reductase conserved site PF552_16680 IPR001796 Dihydrofolate reductase domain PF552_16690 IPR002569 Peptide methionine sulphoxide reductase MsrA PF552_16690 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily PF552_16700 IPR002898 MotA/TolQ/ExbB proton channel PF552_16710 IPR036477 Formyl transferase, N-terminal domain superfamily PF552_16710 IPR002376 Formyl transferase, N-terminal PF552_16710 IPR002912 ACT domain PF552_16710 IPR004810 Formyltetrahydrofolate deformylase PF552_16710 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain PF552_16720 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent PF552_16720 IPR015590 Aldehyde dehydrogenase domain PF552_16720 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_16720 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PF552_16720 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_16720 IPR016161 Aldehyde/histidinol dehydrogenase PF552_16725 IPR037147 Ribosomal protein L28/L24 superfamily PF552_16725 IPR001383 Ribosomal protein L28 PF552_16725 IPR034704 L28p-like PF552_16725 IPR026569 Ribosomal protein L28/L24 PF552_16730 IPR038584 Ribosomal protein L33 superfamily PF552_16730 IPR001705 Ribosomal protein L33 PF552_16730 IPR018264 Ribosomal protein L33, conserved site PF552_16730 IPR011332 Zinc-binding ribosomal protein PF552_16735 IPR003148 Regulator of K+ conductance, N-terminal PF552_16735 IPR006153 Cation/H+ exchanger PF552_16735 IPR004771 K+/H+ exchanger PF552_16735 IPR038770 Sodium/solute symporter superfamily PF552_16735 IPR036291 NAD(P)-binding domain superfamily PF552_16755 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PF552_16755 IPR000504 RNA recognition motif domain PF552_16755 IPR035979 RNA-binding domain superfamily PF552_16760 IPR034739 UvrD/AddA helicase, N-terminal PF552_16760 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_16760 IPR014017 UvrD-like DNA helicase, C-terminal PF552_16760 IPR013986 DExx box DNA helicase domain superfamily PF552_16760 IPR005751 ATP-dependent DNA helicase PcrA PF552_16760 IPR014016 UvrD-like helicase, ATP-binding domain PF552_16760 IPR000212 DNA helicase, UvrD/REP type PF552_16775 IPR028612 DNA topoisomerase I, type IA PF552_16775 IPR006171 TOPRIM domain PF552_16775 IPR034149 DNA topoisomerase 1, TOPRIM domain PF552_16775 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PF552_16775 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PF552_16775 IPR023406 DNA topoisomerase, type IA, active site PF552_16775 IPR003601 DNA topoisomerase, type IA, domain 2 PF552_16775 IPR000380 DNA topoisomerase, type IA PF552_16775 IPR013497 DNA topoisomerase, type IA, central PF552_16775 IPR023405 DNA topoisomerase, type IA, core domain PF552_16775 IPR003602 DNA topoisomerase, type IA, DNA-binding domain PF552_16775 IPR013498 DNA topoisomerase, type IA, zn finger PF552_16775 IPR005733 DNA topoisomerase I, bacterial-type PF552_16775 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type PF552_16775 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PF552_16785 IPR002577 Helix-turn-helix, HxlR type PF552_16785 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_16785 IPR036390 Winged helix DNA-binding domain superfamily PF552_16790 IPR036291 NAD(P)-binding domain superfamily PF552_16790 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site PF552_16790 IPR020843 Polyketide synthase, enoylreductase domain PF552_16790 IPR011032 GroES-like superfamily PF552_16790 IPR013154 Alcohol dehydrogenase, N-terminal PF552_16790 IPR013149 Alcohol dehydrogenase, C-terminal PF552_16790 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 PF552_16795 IPR007236 SlyX PF552_16800 IPR017871 ABC transporter, conserved site PF552_16800 IPR003593 AAA+ ATPase domain PF552_16800 IPR032524 ABC transporter Uup, C-terminal PF552_16800 IPR032781 ABC-transporter extension domain PF552_16800 IPR003439 ABC transporter-like PF552_16800 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_16800 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily PF552_16805 IPR001123 Amino acid exporter protein, LeuE-type PF552_16805 IPR004778 Homoserine/Threonine efflux protein PF552_16810 IPR004960 Bacterial lipid A biosynthesis acyltransferase PF552_16810 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase PF552_16820 IPR033380 Glutamate-aspartate symport protein GltP/GltT PF552_16820 IPR001991 Sodium:dicarboxylate symporter PF552_16820 IPR018107 Sodium:dicarboxylate symporter, conserved site PF552_16820 IPR036458 Sodium:dicarboxylate symporter superfamily PF552_16820 IPR034703 Proton/glutamate-aspartate symporter GltP PF552_16830 IPR012280 Semialdehyde dehydrogenase, dimerisation domain PF552_16830 IPR000534 Semialdehyde dehydrogenase, NAD-binding PF552_16830 IPR036291 NAD(P)-binding domain superfamily PF552_16830 IPR012080 Aspartate-semialdehyde dehydrogenase PF552_16830 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type PF552_16830 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site PF552_16850 IPR001406 Pseudouridine synthase I, TruA PF552_16850 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain PF552_16850 IPR020095 Pseudouridine synthase I, TruA, C-terminal PF552_16850 IPR020103 Pseudouridine synthase, catalytic domain superfamily PF552_16860 IPR012340 Nucleic acid-binding, OB-fold PF552_16860 IPR004368 Translation initiation factor IF-1 PF552_16860 IPR022967 RNA-binding domain, S1 PF552_16860 IPR006196 RNA-binding domain, S1, IF1 type PF552_16875 IPR024084 Isopropylmalate dehydrogenase-like domain PF552_16875 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site PF552_16875 IPR004429 Isopropylmalate dehydrogenase PF552_16885 IPR033940 3-isopropylmalate dehydratase, swivel domain PF552_16885 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PF552_16885 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain PF552_16885 IPR004431 3-isopropylmalate dehydratase, small subunit PF552_16890 IPR036008 Aconitase, iron-sulfur domain PF552_16890 IPR018136 Aconitase family, 4Fe-4S cluster binding site PF552_16890 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain PF552_16890 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PF552_16890 IPR033941 3-Isopropylmalate dehydratase, catalytic domain PF552_16890 IPR004430 3-isopropylmalate dehydratase, large subunit PF552_16900 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_16900 IPR005119 LysR, substrate-binding PF552_16900 IPR000847 Transcription regulator HTH, LysR PF552_16900 IPR036390 Winged helix DNA-binding domain superfamily PF552_16910 IPR015797 NUDIX hydrolase-like domain superfamily PF552_16910 IPR020084 NUDIX hydrolase, conserved site PF552_16910 IPR020476 NUDIX hydrolase PF552_16910 IPR000086 NUDIX hydrolase domain PF552_16910 IPR022927 RNA pyrophosphohydrolase RppH PF552_16915 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PF552_16915 IPR029016 GAF-like domain superfamily PF552_16915 IPR008279 PEP-utilising enzyme, mobile domain PF552_16915 IPR018274 PEP-utilising enzyme, active site PF552_16915 IPR000121 PEP-utilising enzyme, C-terminal PF552_16915 IPR023151 PEP-utilising enzyme, conserved site PF552_16915 IPR040442 Pyruvate kinase-like domain superfamily PF552_16915 IPR003018 GAF domain PF552_16915 IPR036618 PtsI, HPr-binding domain superfamily PF552_16915 IPR008731 Phosphotransferase system, enzyme I N-terminal PF552_16915 IPR006318 Phosphotransferase system, enzyme I-like PF552_16915 IPR036637 Phosphohistidine domain superfamily PF552_16920 IPR019794 Peroxidase, active site PF552_16920 IPR010255 Haem peroxidase superfamily PF552_16920 IPR002016 Haem peroxidase PF552_16920 IPR000763 Catalase-peroxidase haem PF552_16925 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_16925 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D PF552_16925 IPR001279 Metallo-beta-lactamase PF552_16930 IPR000847 Transcription regulator HTH, LysR PF552_16930 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_16930 IPR036390 Winged helix DNA-binding domain superfamily PF552_16930 IPR005119 LysR, substrate-binding PF552_16940 IPR004045 Glutathione S-transferase, N-terminal PF552_16940 IPR010987 Glutathione S-transferase, C-terminal-like PF552_16940 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PF552_16940 IPR040079 Glutathione Transferase family PF552_16940 IPR036249 Thioredoxin-like superfamily PF552_16945 IPR013196 Helix-turn-helix, type 11 PF552_16945 IPR028349 Protein PafC PF552_16945 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_16945 IPR036390 Winged helix DNA-binding domain superfamily PF552_16945 IPR026881 WYL domain PF552_16945 IPR001034 DeoR-type HTH domain PF552_16950 IPR023733 Pyrophosphatase PpaX PF552_16950 IPR036412 HAD-like superfamily PF552_16950 IPR006439 HAD hydrolase, subfamily IA PF552_16950 IPR041492 Haloacid dehalogenase-like hydrolase PF552_16950 IPR023214 HAD superfamily PF552_16950 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PF552_16955 IPR020103 Pseudouridine synthase, catalytic domain superfamily PF552_16955 IPR006225 Pseudouridine synthase, RluC/RluD PF552_16955 IPR002942 RNA-binding S4 domain PF552_16955 IPR006145 Pseudouridine synthase, RsuA/RluA PF552_16955 IPR036986 RNA-binding S4 domain superfamily PF552_16955 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PF552_16960 IPR003029 S1 domain PF552_16960 IPR022967 RNA-binding domain, S1 PF552_16960 IPR012340 Nucleic acid-binding, OB-fold PF552_16960 IPR021968 Polyribonucleotide phosphorylase C-terminal PF552_16960 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G PF552_16960 IPR028878 Ribonuclease E PF552_16960 IPR004659 Ribonuclease E/G PF552_16965 IPR025110 AMP-binding enzyme, C-terminal domain PF552_16965 IPR020845 AMP-binding, conserved site PF552_16965 IPR000873 AMP-dependent synthetase/ligase PF552_16965 IPR042099 AMP-dependent synthetase-like superfamily PF552_16965 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 PF552_16980 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_16980 IPR005119 LysR, substrate-binding PF552_16980 IPR000847 Transcription regulator HTH, LysR PF552_16980 IPR036390 Winged helix DNA-binding domain superfamily PF552_16985 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PF552_16985 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_16985 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_16985 IPR036291 NAD(P)-binding domain superfamily PF552_16990 IPR023404 Radical SAM, alpha/beta horseshoe PF552_16990 IPR004559 Heme chaperone HemW-like PF552_16990 IPR007197 Radical SAM PF552_16990 IPR034505 Anaerobic coproporphyrinogen-III oxidase PF552_16990 IPR010723 HemN, C-terminal PF552_16990 IPR006638 Elp3/MiaB/NifB PF552_17000 IPR002528 Multi antimicrobial extrusion protein PF552_17005 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PF552_17005 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_17005 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_17005 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_17005 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_17005 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_17010 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_17010 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_17010 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_17010 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_17010 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PF552_17015 IPR011009 Protein kinase-like domain superfamily PF552_17015 IPR000719 Protein kinase domain PF552_17015 IPR004147 UbiB domain PF552_17020 IPR034704 L28p-like PF552_17020 IPR002150 Ribosomal protein L31 PF552_17020 IPR042105 Ribosomal protein L31 superfamily PF552_17020 IPR027493 Ribosomal protein L31 type B PF552_17030 IPR003691 Putative fluoride ion transporter CrcB PF552_17040 IPR009051 Alpha-helical ferredoxin PF552_17040 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 PF552_17040 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PF552_17040 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PF552_17040 IPR028261 Dihydroprymidine dehydrogenase domain II PF552_17040 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_17040 IPR023753 FAD/NAD(P)-binding domain PF552_17050 IPR013088 Zinc finger, NHR/GATA-type PF552_17050 IPR005584 DNA gyrase inhibitor YacG PF552_17055 IPR001279 Metallo-beta-lactamase PF552_17055 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PF552_17060 IPR033659 Ferrochelatase, N-terminal PF552_17060 IPR001015 Ferrochelatase PF552_17060 IPR019772 Ferrochelatase, active site PF552_17060 IPR033644 Ferrochelatase, C-terminal PF552_17070 IPR004391 Glutamate racemase PF552_17070 IPR033134 Asp/Glu racemase, active site 2 PF552_17070 IPR001920 Asp/Glu racemase PF552_17070 IPR015942 Asp/Glu/hydantoin racemase PF552_17070 IPR018187 Asp/Glu racemase, active site 1 PF552_17080 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PF552_17080 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase PF552_17080 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_17090 IPR022931 Sulfur carrier protein TusA PF552_17090 IPR001455 TusA-like domain PF552_17090 IPR036868 TusA-like domain superfamily PF552_17095 IPR005170 Transporter-associated domain PF552_17095 IPR000644 CBS domain PF552_17095 IPR036318 FAD-binding, type PCMH-like superfamily PF552_17095 IPR016169 FAD-binding, type PCMH, subdomain 2 PF552_17100 IPR004563 Apolipoprotein N-acyltransferase PF552_17100 IPR003010 Carbon-nitrogen hydrolase PF552_17100 IPR036526 Carbon-nitrogen hydrolase superfamily PF552_17105 IPR008231 Probable chaperone CsaA PF552_17105 IPR012340 Nucleic acid-binding, OB-fold PF552_17105 IPR002547 tRNA-binding domain PF552_17115 IPR000983 Bacterial general secretion pathway protein G-type pilin PF552_17115 IPR012902 Prokaryotic N-terminal methylation site PF552_17115 IPR013545 Type II secretion system protein G PF552_17115 IPR010054 General secretion pathway protein G PF552_17120 IPR042094 Type II secretion system F domain superfamily PF552_17120 IPR001992 Type II secretion system conserved site PF552_17120 IPR011850 General secretion pathway protein F PF552_17120 IPR003004 GspF/PilC family PF552_17120 IPR018076 Type II secretion system F domain PF552_17125 IPR011545 DEAD/DEAH box helicase domain PF552_17125 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_17125 IPR001650 Helicase, C-terminal PF552_17125 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17125 IPR005259 Primosomal protein N' PF552_17125 IPR041222 Primosomal protein N', 3' DNA-binding domain PF552_17125 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain PF552_17125 IPR041236 Primosomal protein N, C-terminal domain PF552_17125 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily PF552_17130 IPR006153 Cation/H+ exchanger PF552_17130 IPR004771 K+/H+ exchanger PF552_17130 IPR020884 Glutathione-regulated potassium-efflux system protein KefB PF552_17130 IPR038770 Sodium/solute symporter superfamily PF552_17130 IPR036291 NAD(P)-binding domain superfamily PF552_17130 IPR003148 Regulator of K+ conductance, N-terminal PF552_17135 IPR000397 Heat shock protein Hsp33 PF552_17135 IPR016154 Heat shock protein Hsp33, C-terminal PF552_17135 IPR016153 Heat shock protein Hsp33, N-terminal PF552_17135 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily PF552_17145 IPR036869 Chaperone J-domain superfamily PF552_17145 IPR018253 DnaJ domain, conserved site PF552_17145 IPR008971 HSP40/DnaJ peptide-binding PF552_17145 IPR002939 Chaperone DnaJ, C-terminal PF552_17145 IPR023859 DNA-binding protein, curved-DNA PF552_17145 IPR001623 DnaJ domain PF552_17150 IPR022835 Chaperone modulatory protein CbpM PF552_17155 IPR004488 Magnesium/cobalt transport protein CorA PF552_17155 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB PF552_17160 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_17160 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily PF552_17160 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain PF552_17160 IPR027408 PNPase/RNase PH domain superfamily PF552_17160 IPR012162 Polyribonucleotide nucleotidyltransferase PF552_17160 IPR012340 Nucleic acid-binding, OB-fold PF552_17160 IPR004087 K Homology domain PF552_17160 IPR004088 K Homology domain, type 1 PF552_17160 IPR036345 Exoribonuclease, PH domain 2 superfamily PF552_17160 IPR015847 Exoribonuclease, phosphorolytic domain 2 PF552_17160 IPR001247 Exoribonuclease, phosphorolytic domain 1 PF552_17160 IPR022967 RNA-binding domain, S1 PF552_17160 IPR036612 K Homology domain, type 1 superfamily PF552_17160 IPR003029 S1 domain PF552_17165 IPR005290 Ribosomal protein S15, bacterial-type PF552_17165 IPR009068 S15/NS1, RNA-binding PF552_17165 IPR000589 Ribosomal protein S15 PF552_17170 IPR001466 Beta-lactamase-related PF552_17170 IPR012338 Beta-lactamase/transpeptidase-like PF552_17175 IPR003593 AAA+ ATPase domain PF552_17175 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17175 IPR006344 RecBCD enzyme subunit RecD PF552_17175 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain PF552_17175 IPR027785 UvrD-like helicase C-terminal domain PF552_17180 IPR014017 UvrD-like DNA helicase, C-terminal PF552_17180 IPR011604 Exonuclease, phage-type/RecB, C-terminal PF552_17180 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17180 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type PF552_17180 IPR004586 RecBCD enzyme subunit RecB PF552_17180 IPR011335 Restriction endonuclease type II-like PF552_17180 IPR014016 UvrD-like helicase, ATP-binding domain PF552_17180 IPR034739 UvrD/AddA helicase, N-terminal PF552_17180 IPR000212 DNA helicase, UvrD/REP type PF552_17185 IPR011335 Restriction endonuclease type II-like PF552_17185 IPR041500 RecC, C-terminal PF552_17185 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17185 IPR013986 DExx box DNA helicase domain superfamily PF552_17185 IPR006697 RecBCD enzyme subunit RecC PF552_17195 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17195 IPR022488 Polyphosphate kinase-2-related PF552_17205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_17205 IPR004033 UbiE/COQ5 methyltransferase PF552_17205 IPR023576 UbiE/COQ5 methyltransferase, conserved site PF552_17215 IPR011009 Protein kinase-like domain superfamily PF552_17215 IPR010232 Probable protein kinase UbiB PF552_17215 IPR004147 UbiB domain PF552_17220 IPR002938 FAD-binding domain PF552_17220 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_17225 IPR026660 Phosphoribosyl-AMP cyclohydrolase PF552_17225 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain PF552_17225 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily PF552_17240 IPR005281 Monovalent cation:proton antiporter, subunit B PF552_17240 IPR025383 Domain of unknown function DUF4040 PF552_17240 IPR007182 Na+/H+ antiporter MnhB subunit-related protein PF552_17240 IPR005663 Monovalent cation proton antiporter subunit A PF552_17240 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal PF552_17240 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PF552_17245 IPR006673 Mnh complex subunit C1 PF552_17245 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like PF552_17250 IPR004775 Na(+)/H(+) antiporter subunit D1 PF552_17250 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PF552_17255 IPR002758 Na+/H+ antiporter subunit E PF552_17260 IPR007208 Na(+)/H(+) antiporter subunit F-like PF552_17265 IPR005133 Na+/H+ antiporter subunit G PF552_17270 IPR015946 K homology domain-like, alpha/beta PF552_17270 IPR000238 Ribosome-binding factor A PF552_17270 IPR023799 Ribosome-binding factor A domain superfamily PF552_17275 IPR013575 Initiation factor 2 associated domain, bacterial PF552_17275 IPR009061 Putative DNA-binding domain superfamily PF552_17275 IPR006847 Translation initiation factor IF-2, N-terminal PF552_17275 IPR009000 Translation protein, beta-barrel domain superfamily PF552_17275 IPR036925 Translation initiation factor IF-2, domain 3 superfamily PF552_17275 IPR023115 Translation initiation factor IF- 2, domain 3 PF552_17275 IPR005225 Small GTP-binding protein domain PF552_17275 IPR000178 Translation initiation factor aIF-2, bacterial-like PF552_17275 IPR000795 Transcription factor, GTP-binding domain PF552_17275 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17275 IPR015760 Translation initiation factor IF- 2 PF552_17280 IPR003029 S1 domain PF552_17280 IPR010213 Transcription termination factor NusA PF552_17280 IPR010214 Transcription termination factor NusA, C-terminal duplication PF552_17280 IPR013735 Transcription factor NusA, N-terminal PF552_17280 IPR022967 RNA-binding domain, S1 PF552_17280 IPR015946 K homology domain-like, alpha/beta PF552_17280 IPR030842 Transcription termination/antitermination protein NusA, bacterial PF552_17280 IPR012340 Nucleic acid-binding, OB-fold PF552_17280 IPR009019 K homology domain superfamily, prokaryotic type PF552_17280 IPR025249 KH domain, NusA-like PF552_17280 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical PF552_17280 IPR036555 NusA, N-terminal domain superfamily PF552_17285 IPR003728 Ribosome maturation factor RimP PF552_17285 IPR028998 Ribosome maturation factor RimP, C-terminal PF552_17285 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily PF552_17285 IPR028989 Ribosome maturation factor RimP, N-terminal PF552_17285 IPR035956 RimP, N-terminal domain superfamily PF552_17305 IPR004692 Preprotein translocase SecG subunit PF552_17310 IPR013785 Aldolase-type TIM barrel PF552_17310 IPR035990 Triosephosphate isomerase superfamily PF552_17310 IPR000652 Triosephosphate isomerase PF552_17310 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic PF552_17310 IPR020861 Triosephosphate isomerase, active site PF552_17320 IPR003004 GspF/PilC family PF552_17320 IPR001992 Type II secretion system conserved site PF552_17320 IPR018076 Type II secretion system F domain PF552_17320 IPR042094 Type II secretion system F domain superfamily PF552_17325 IPR010627 Peptidase A24A, N-terminal PF552_17325 IPR014032 Peptidase A24A, prepilin type IV, bacterial PF552_17325 IPR000045 Prepilin type IV endopeptidase, peptidase domain PF552_17330 IPR001977 Dephospho-CoA kinase PF552_17330 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17340 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB PF552_17340 IPR029028 Alpha/beta knot methyltransferases PF552_17340 IPR029064 50S ribosomal protein L30e-like PF552_17340 IPR004441 RNA methyltransferase TrmH family PF552_17340 IPR001537 tRNA/rRNA methyltransferase, SpoU type PF552_17340 IPR013123 RNA 2-O ribose methyltransferase, substrate binding PF552_17340 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PF552_17345 IPR009664 Pyrimidine/purine nucleoside phosphorylase PF552_17345 IPR014710 RmlC-like jelly roll fold PF552_17345 IPR011051 RmlC-like cupin domain superfamily PF552_17355 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17355 IPR003395 RecF/RecN/SMC, N-terminal PF552_17355 IPR004604 DNA recombination/repair protein RecN PF552_17360 IPR003774 Protein of unknown function UPF0301 PF552_17365 IPR012337 Ribonuclease H-like superfamily PF552_17365 IPR005227 Putative pre-16S rRNA nuclease PF552_17365 IPR006641 YqgF/RNase H-like domain PF552_17365 IPR037027 YqgF/RNase H-like domain superfamily PF552_17370 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PF552_17370 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA PF552_17370 IPR006143 RND efflux pump, membrane fusion protein PF552_17395 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_17395 IPR035451 Ada-like domain superfamily PF552_17395 IPR004026 Ada DNA repair, metal-binding PF552_17395 IPR016221 Bifunctional regulatory protein Ada PF552_17395 IPR009057 Homeobox-like domain superfamily PF552_17395 IPR018060 DNA binding HTH domain, AraC-type PF552_17395 IPR018062 HTH domain AraC-type, conserved site PF552_17395 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site PF552_17395 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding PF552_17395 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain PF552_17395 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain PF552_17395 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily PF552_17400 IPR000462 CDP-alcohol phosphatidyltransferase PF552_17400 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial PF552_17400 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PF552_17410 IPR001162 UvrC family homology region PF552_17410 IPR038476 UvrC homology region 2 superfamily PF552_17410 IPR036876 UVR domain superfamily PF552_17410 IPR001943 UVR domain PF552_17410 IPR004791 UvrABC system, subunit C PF552_17410 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PF552_17410 IPR035901 GIY-YIG endonuclease superfamily PF552_17410 IPR000305 GIY-YIG endonuclease PF552_17410 IPR010994 RuvA domain 2-like PF552_17430 IPR036291 NAD(P)-binding domain superfamily PF552_17430 IPR012799 Fatty oxidation complex, alpha subunit FadB PF552_17430 IPR001753 Enoyl-CoA hydratase/isomerase PF552_17430 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PF552_17430 IPR029045 ClpP/crotonase-like domain superfamily PF552_17430 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PF552_17430 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PF552_17430 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site PF552_17430 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_17435 IPR020617 Thiolase, C-terminal PF552_17435 IPR020613 Thiolase, conserved site PF552_17435 IPR020616 Thiolase, N-terminal PF552_17435 IPR020615 Thiolase, acyl-enzyme intermediate active site PF552_17435 IPR020610 Thiolase, active site PF552_17435 IPR002155 Thiolase PF552_17435 IPR012805 Acetyl-CoA C-acyltransferase FadA PF552_17435 IPR016039 Thiolase-like PF552_17450 IPR011789 Cu(I)-responsive transcriptional regulator PF552_17450 IPR009061 Putative DNA-binding domain superfamily PF552_17450 IPR000551 MerR-type HTH domain PF552_17450 IPR015358 Transcription regulator MerR, DNA binding PF552_17460 IPR001853 DSBA-like thioredoxin domain PF552_17460 IPR036249 Thioredoxin-like superfamily PF552_17475 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_17475 IPR020575 Heat shock protein Hsp90, N-terminal PF552_17475 IPR001404 Heat shock protein Hsp90 family PF552_17475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_17475 IPR003594 Histidine kinase/HSP90-like ATPase PF552_17475 IPR037196 HSP90, C-terminal domain PF552_17490 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal PF552_17490 IPR032813 Putative Na+/H+ antiporter, N-terminal PF552_17515 IPR012754 DNA-directed RNA polymerase, subunit beta-prime PF552_17515 IPR000722 RNA polymerase, alpha subunit PF552_17515 IPR006592 RNA polymerase, N-terminal PF552_17515 IPR007080 RNA polymerase Rpb1, domain 1 PF552_17515 IPR007066 RNA polymerase Rpb1, domain 3 PF552_17515 IPR007083 RNA polymerase Rpb1, domain 4 PF552_17515 IPR007081 RNA polymerase Rpb1, domain 5 PF552_17515 IPR038120 RNA polymerase Rpb1, funnel domain superfamily PF552_17515 IPR042102 RNA polymerase Rpb1, domain 3 superfamily PF552_17520 IPR014724 RNA polymerase Rpb2, OB-fold PF552_17520 IPR007641 RNA polymerase Rpb2, domain 7 PF552_17520 IPR007645 RNA polymerase Rpb2, domain 3 PF552_17520 IPR037034 RNA polymerase Rpb2, domain 2 superfamily PF552_17520 IPR007642 RNA polymerase Rpb2, domain 2 PF552_17520 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily PF552_17520 IPR007121 RNA polymerase, beta subunit, conserved site PF552_17520 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type PF552_17520 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily PF552_17520 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain PF552_17520 IPR015712 DNA-directed RNA polymerase, subunit 2 PF552_17520 IPR007644 RNA polymerase, beta subunit, protrusion PF552_17520 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain PF552_17525 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily PF552_17525 IPR008932 Ribosomal protein L7/L12, oligomerisation PF552_17525 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PF552_17525 IPR000206 Ribosomal protein L7/L12 PF552_17525 IPR013823 Ribosomal protein L7/L12, C-terminal PF552_17530 IPR022973 Ribosomal protein L10 PF552_17530 IPR002363 Ribosomal protein L10, eubacterial, conserved site PF552_17530 IPR001790 Ribosomal protein L10P PF552_17535 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PF552_17535 IPR023673 Ribosomal protein L1, conserved site PF552_17535 IPR023674 Ribosomal protein L1-like PF552_17535 IPR002143 Ribosomal protein L1 PF552_17535 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PF552_17535 IPR005878 Ribosomal protein L1, bacterial-type PF552_17540 IPR000911 Ribosomal protein L11/L12 PF552_17540 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily PF552_17540 IPR006519 Ribosomal protein L11, bacterial-type PF552_17540 IPR020783 Ribosomal protein L11, C-terminal PF552_17540 IPR036769 Ribosomal protein L11, C-terminal domain superfamily PF552_17540 IPR020785 Ribosomal protein L11, conserved site PF552_17540 IPR020784 Ribosomal protein L11, N-terminal PF552_17545 IPR014722 Ribosomal protein L2, domain 2 PF552_17545 IPR005824 KOW PF552_17545 IPR008991 Translation protein SH3-like domain superfamily PF552_17545 IPR006645 NusG, N-terminal PF552_17545 IPR001062 Transcription antitermination protein, NusG PF552_17545 IPR036735 NusG, N-terminal domain superfamily PF552_17545 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site PF552_17550 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit PF552_17550 IPR038379 SecE superfamily PF552_17550 IPR005807 SecE subunit of protein translocation complex, bacterial-like PF552_17560 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle PF552_17560 IPR000795 Transcription factor, GTP-binding domain PF552_17560 IPR033720 Elongation factor Tu, domain 2 PF552_17560 IPR031157 Tr-type G domain, conserved site PF552_17560 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17560 IPR005225 Small GTP-binding protein domain PF552_17560 IPR009000 Translation protein, beta-barrel domain superfamily PF552_17560 IPR004161 Translation elongation factor EFTu-like, domain 2 PF552_17560 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PF552_17560 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PF552_17560 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain PF552_17585 IPR019999 Anthranilate synthase component I-like PF552_17585 IPR006805 Anthranilate synthase component I, N-terminal PF552_17585 IPR005256 Anthranilate synthase component I, PabB-like PF552_17585 IPR015890 Chorismate-utilising enzyme, C-terminal PF552_17585 IPR005801 ADC synthase PF552_17590 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PF552_17590 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic PF552_17590 IPR036412 HAD-like superfamily PF552_17590 IPR023214 HAD superfamily PF552_17590 IPR037512 Phosphoglycolate phosphatase, prokaryotic PF552_17590 IPR006439 HAD hydrolase, subfamily IA PF552_17590 IPR041492 Haloacid dehalogenase-like hydrolase PF552_17595 IPR022128 Domain of unknown function DUF3662 PF552_17595 IPR000253 Forkhead-associated (FHA) domain PF552_17595 IPR042287 FhaA, N-terminal PF552_17595 IPR008984 SMAD/FHA domain superfamily PF552_17600 IPR013356 Type II secretion system GspD PF552_17600 IPR001775 GspD/PilQ family PF552_17600 IPR005644 NolW-like PF552_17600 IPR038591 NolW-like superfamily PF552_17600 IPR004846 Type II/III secretion system PF552_17600 IPR004845 Type II secretion system GspD, conserved site PF552_17615 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily PF552_17615 IPR001801 Histone-like protein H-NS PF552_17615 IPR027444 Histone-like protein H-NS, C-terminal domain PF552_17640 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily PF552_17640 IPR000860 Porphobilinogen deaminase PF552_17640 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site PF552_17640 IPR022417 Porphobilinogen deaminase, N-terminal PF552_17640 IPR022418 Porphobilinogen deaminase, C-terminal PF552_17650 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region PF552_17650 IPR010559 Signal transduction histidine kinase, internal region PF552_17650 IPR029016 GAF-like domain superfamily PF552_17650 IPR003594 Histidine kinase/HSP90-like ATPase PF552_17650 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_17655 IPR020557 Fumarate lyase, conserved site PF552_17655 IPR029419 Argininosuccinate lyase, C-terminal PF552_17655 IPR009049 Argininosuccinate lyase PF552_17655 IPR024083 Fumarase/histidase, N-terminal PF552_17655 IPR000362 Fumarate lyase family PF552_17655 IPR008948 L-Aspartase-like PF552_17655 IPR022761 Fumarate lyase, N-terminal PF552_17660 IPR007457 Fe(II) trafficking protein YggX PF552_17660 IPR036766 Fe(II) trafficking protein YggX superfamily PF552_17665 IPR028366 Phosphate transport system protein PhoU PF552_17665 IPR038078 PhoU-like domain superfamily PF552_17665 IPR026022 PhoU domain PF552_17670 IPR003423 Outer membrane efflux protein PF552_17670 IPR010130 Type I secretion outer membrane protein, TolC PF552_17675 IPR000620 EamA domain PF552_17675 IPR004779 Carboxylate/Amino Acid/Amine Transporter PF552_17690 IPR037509 Phosphomethylpyrimidine synthase PF552_17690 IPR025747 ThiC-associated domain PF552_17690 IPR038521 ThiC/Bza superfamily PF552_17690 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B PF552_17710 IPR001460 Penicillin-binding protein, transpeptidase PF552_17710 IPR012338 Beta-lactamase/transpeptidase-like PF552_17720 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_17720 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17725 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_17735 IPR018045 Sulphate anion transporter, conserved site PF552_17735 IPR036513 STAS domain superfamily PF552_17735 IPR002645 STAS domain PF552_17735 IPR011547 SLC26A/SulP transporter domain PF552_17735 IPR001902 SLC26A/SulP transporter PF552_17740 IPR006015 Universal stress protein A family PF552_17740 IPR006016 UspA PF552_17770 IPR012337 Ribonuclease H-like superfamily PF552_17770 IPR036397 Ribonuclease H superfamily PF552_17770 IPR001584 Integrase, catalytic core PF552_17785 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PF552_17785 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA PF552_17785 IPR029052 Metallo-dependent phosphatase-like PF552_17790 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PF552_17790 IPR000962 Zinc finger, DksA/TraR C4-type PF552_17790 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PF552_17790 IPR012784 RNA polymerase-binding transcription factor DksA PF552_17790 IPR037187 DksA, N-terminal domain superfamily PF552_17795 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PF552_17795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_17795 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PF552_17795 IPR022380 Glutamyl-Q tRNA(Asp) synthetase PF552_17800 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA PF552_17800 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site PF552_17800 IPR013437 Probable peptidoglycan glycosyltransferase FtsW PF552_17805 IPR036565 Mur-like, catalytic domain superfamily PF552_17805 IPR004101 Mur ligase, C-terminal PF552_17805 IPR036615 Mur ligase, C-terminal domain superfamily PF552_17805 IPR013221 Mur ligase, central PF552_17805 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase PF552_17815 IPR003373 Ferrous iron transport protein B PF552_17815 IPR011640 Ferrous iron transport protein B, C-terminal PF552_17815 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17815 IPR006073 GTP binding domain PF552_17815 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain PF552_17815 IPR030389 FeoB-type guanine nucleotide-binding (G) domain PF552_17825 IPR023009 Tyrosine recombinase XerC/XerD PF552_17825 IPR011932 Tyrosine recombinase XerD PF552_17825 IPR004107 Integrase, SAM-like, N-terminal PF552_17825 IPR013762 Integrase-like, catalytic domain superfamily PF552_17825 IPR002104 Integrase, catalytic domain PF552_17825 IPR011010 DNA breaking-rejoining enzyme, catalytic core PF552_17825 IPR010998 Integrase/recombinase, N-terminal PF552_17830 IPR013766 Thioredoxin domain PF552_17830 IPR033954 Disulphide bond isomerase, DsbC/G PF552_17830 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PF552_17830 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily PF552_17830 IPR012336 Thioredoxin-like fold PF552_17830 IPR036249 Thioredoxin-like superfamily PF552_17830 IPR017937 Thioredoxin, conserved site PF552_17835 IPR002912 ACT domain PF552_17835 IPR016204 Homoserine dehydrogenase PF552_17835 IPR001342 Homoserine dehydrogenase, catalytic PF552_17835 IPR019811 Homoserine dehydrogenase, conserved site PF552_17835 IPR036291 NAD(P)-binding domain superfamily PF552_17835 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding PF552_17840 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PF552_17840 IPR026260 Threonine synthase, bacterial/archaeal PF552_17840 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PF552_17840 IPR004450 Threonine synthase-like PF552_17840 IPR001926 Pyridoxal-phosphate dependent enzyme PF552_17845 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal PF552_17845 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A PF552_17845 IPR012338 Beta-lactamase/transpeptidase-like PF552_17850 IPR011006 CheY-like superfamily PF552_17850 IPR001789 Signal transduction response regulator, receiver domain PF552_17850 IPR000792 Transcription regulator LuxR, C-terminal PF552_17850 IPR016032 Signal transduction response regulator, C-terminal effector PF552_17855 IPR005467 Histidine kinase domain PF552_17855 IPR003594 Histidine kinase/HSP90-like ATPase PF552_17855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PF552_17855 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PF552_17855 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PF552_17855 IPR000014 PAS domain PF552_17855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PF552_17860 IPR002078 RNA polymerase sigma factor 54 interaction domain PF552_17860 IPR009057 Homeobox-like domain superfamily PF552_17860 IPR002197 DNA binding HTH domain, Fis-type PF552_17860 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17860 IPR001789 Signal transduction response regulator, receiver domain PF552_17860 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PF552_17860 IPR025944 Sigma-54 interaction domain, conserved site PF552_17860 IPR011006 CheY-like superfamily PF552_17860 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PF552_17860 IPR003593 AAA+ ATPase domain PF552_17865 IPR029045 ClpP/crotonase-like domain superfamily PF552_17865 IPR001478 PDZ domain PF552_17865 IPR036034 PDZ superfamily PF552_17865 IPR004447 C-terminal-processing peptidase S41A PF552_17865 IPR005151 Tail specific protease PF552_17870 IPR017850 Alkaline-phosphatase-like, core domain superfamily PF552_17870 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent PF552_17870 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily PF552_17870 IPR011258 BPG-independent PGAM, N-terminal PF552_17870 IPR006124 Metalloenzyme PF552_17875 IPR005495 Permease LptG/LptF-related PF552_17875 IPR030923 LPS export ABC transporter permease LptG PF552_17885 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B PF552_17885 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal PF552_17885 IPR023042 Peptidase M17, leucine aminopeptidase PF552_17885 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal PF552_17905 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily PF552_17905 IPR001783 Lumazine-binding protein PF552_17905 IPR026017 Lumazine-binding domain PF552_17905 IPR017938 Riboflavin synthase-like beta-barrel PF552_17915 IPR016192 APOBEC/CMP deaminase, zinc-binding PF552_17915 IPR002125 Cytidine and deoxycytidylate deaminase domain PF552_17915 IPR016193 Cytidine deaminase-like PF552_17915 IPR024072 Dihydrofolate reductase-like domain superfamily PF552_17915 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal PF552_17915 IPR011549 Riboflavin-specific deaminase, C-terminal PF552_17915 IPR004794 Riboflavin biosynthesis protein RibD PF552_17920 IPR003796 Ribonucleotide reductase regulator NrdR-like PF552_17920 IPR005144 ATP-cone domain PF552_17925 IPR024041 Ammonium transporter AmtB-like domain PF552_17925 IPR018047 Ammonium transporter, conserved site PF552_17925 IPR001905 Ammonium transporter PF552_17925 IPR029020 Ammonium/urea transporter PF552_17930 IPR011322 Nitrogen regulatory PII-like, alpha/beta PF552_17930 IPR002332 Nitrogen regulatory protein P-II, urydylation site PF552_17930 IPR002187 Nitrogen regulatory protein PII PF552_17930 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PF552_17930 IPR017918 Nitrogen regulatory protein PII, conserved site PF552_17955 IPR001460 Penicillin-binding protein, transpeptidase PF552_17955 IPR012338 Beta-lactamase/transpeptidase-like PF552_17965 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_17965 IPR014001 Helicase superfamily 1/2, ATP-binding domain PF552_17970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_17980 IPR018045 Sulphate anion transporter, conserved site PF552_17980 IPR001902 SLC26A/SulP transporter PF552_17980 IPR002645 STAS domain PF552_17980 IPR011547 SLC26A/SulP transporter domain PF552_17980 IPR036513 STAS domain superfamily PF552_17985 IPR006016 UspA PF552_17985 IPR006015 Universal stress protein A family PF552_18015 IPR036397 Ribonuclease H superfamily PF552_18015 IPR001584 Integrase, catalytic core PF552_18015 IPR012337 Ribonuclease H-like superfamily PF552_18040 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA PF552_18040 IPR002220 DapA-like PF552_18040 IPR013785 Aldolase-type TIM barrel PF552_18040 IPR020624 Schiff base-forming aldolase, conserved site PF552_18040 IPR020625 Schiff base-forming aldolase, active site PF552_18055 IPR023614 Porin domain superfamily PF552_18055 IPR005318 Outer membrane porin, bacterial PF552_18060 IPR008162 Inorganic pyrophosphatase PF552_18060 IPR036649 Inorganic pyrophosphatase superfamily PF552_18075 IPR025110 AMP-binding enzyme, C-terminal domain PF552_18075 IPR020845 AMP-binding, conserved site PF552_18075 IPR000873 AMP-dependent synthetase/ligase PF552_18075 IPR042099 AMP-dependent synthetase-like superfamily PF552_18080 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PF552_18080 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat PF552_18080 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PF552_18080 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal PF552_18080 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily PF552_18080 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative PF552_18080 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta PF552_18085 IPR011701 Major facilitator superfamily PF552_18085 IPR020846 Major facilitator superfamily domain PF552_18085 IPR036259 MFS transporter superfamily PF552_18085 IPR005829 Sugar transporter, conserved site PF552_18090 IPR005115 Uncharacterised domain UPF0126 PF552_18095 IPR032710 NTF2-like domain superfamily PF552_18095 IPR004027 SEC-C motif PF552_18095 IPR023006 Uncharacterised protein family UPF0225 PF552_18100 IPR000644 CBS domain PF552_18100 IPR036318 FAD-binding, type PCMH-like superfamily PF552_18100 IPR016169 FAD-binding, type PCMH, subdomain 2 PF552_18100 IPR005496 Integral membrane protein TerC PF552_18100 IPR005170 Transporter-associated domain PF552_18105 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PF552_18105 IPR031100 LOG family PF552_18110 IPR023721 Multidrug resistance protein MdtD PF552_18110 IPR011701 Major facilitator superfamily PF552_18110 IPR020846 Major facilitator superfamily domain PF552_18110 IPR036259 MFS transporter superfamily PF552_18120 IPR001126 UmuC domain PF552_18120 IPR024728 DNA polymerase type-Y, HhH motif PF552_18120 IPR017961 DNA polymerase, Y-family, little finger domain PF552_18120 IPR036775 DNA polymerase, Y-family, little finger domain superfamily PF552_18120 IPR022880 DNA polymerase IV PF552_18140 IPR024560 Uncharacterised protein family UPF0313, C-terminal PF552_18140 IPR006638 Elp3/MiaB/NifB PF552_18140 IPR020612 Methylthiotransferase, conserved site PF552_18140 IPR007197 Radical SAM PF552_18140 IPR023404 Radical SAM, alpha/beta horseshoe PF552_18140 IPR022946 Uncharacterised protein family UPF0313 PF552_18140 IPR013704 Uncharacterised protein family UPF0313, N-terminal PF552_18160 IPR029039 Flavoprotein-like superfamily PF552_18160 IPR008254 Flavodoxin/nitric oxide synthase PF552_18160 IPR010089 Flavoprotein WrbA-like PF552_18160 IPR005025 NADPH-dependent FMN reductase-like PF552_18160 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic PF552_18170 IPR005856 Cysteine synthase PF552_18170 IPR005859 Cysteine synthase CysK PF552_18170 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site PF552_18170 IPR001926 Pyridoxal-phosphate dependent enzyme PF552_18170 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PF552_18240 IPR023635 Peptide deformylase PF552_18240 IPR036821 Peptide deformylase superfamily PF552_18250 IPR003488 DNA recombination-mediator protein A PF552_18250 IPR041614 DprA, winged helix domain PF552_18250 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_18255 IPR006070 YrdC-like domain PF552_18255 IPR023535 Threonylcarbamoyl-AMP synthase PF552_18255 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PF552_18260 IPR000620 EamA domain PF552_18265 IPR001647 DNA-binding HTH domain, TetR-type PF552_18265 IPR009057 Homeobox-like domain superfamily PF552_18265 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PF552_18270 IPR011701 Major facilitator superfamily PF552_18270 IPR020846 Major facilitator superfamily domain PF552_18270 IPR036259 MFS transporter superfamily PF552_18280 IPR000889 Glutathione peroxidase PF552_18280 IPR029760 Glutathione peroxidase conserved site PF552_18280 IPR029759 Glutathione peroxidase active site PF552_18280 IPR033674 Thioredoxin/glutathione peroxidase BtuE PF552_18280 IPR036249 Thioredoxin-like superfamily PF552_18290 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal PF552_18290 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit PF552_18290 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily PF552_18290 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal PF552_18295 IPR003593 AAA+ ATPase domain PF552_18295 IPR005722 ATP synthase, F1 complex, beta subunit PF552_18295 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PF552_18295 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain PF552_18295 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily PF552_18295 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PF552_18295 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal PF552_18295 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_18300 IPR000131 ATP synthase, F1 complex, gamma subunit PF552_18300 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site PF552_18300 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily PF552_18305 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_18305 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily PF552_18305 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain PF552_18305 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PF552_18305 IPR005294 ATP synthase, F1 complex, alpha subunit PF552_18305 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain PF552_18305 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily PF552_18305 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PF552_18305 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily PF552_18305 IPR000793 ATP synthase, alpha subunit, C-terminal PF552_18310 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily PF552_18310 IPR020781 ATPase, OSCP/delta subunit, conserved site PF552_18310 IPR000711 ATPase, OSCP/delta subunit PF552_18315 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily PF552_18315 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast PF552_18315 IPR005864 ATP synthase, F0 complex, subunit b, bacterial PF552_18320 IPR035921 F/V-ATP synthase subunit C superfamily PF552_18320 IPR002379 V-ATPase proteolipid subunit C-like domain PF552_18320 IPR038662 F1F0 ATP synthase subunit C superfamily PF552_18320 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site PF552_18320 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast PF552_18320 IPR000454 ATP synthase, F0 complex, subunit C PF552_18325 IPR000568 ATP synthase, F0 complex, subunit A PF552_18325 IPR023011 ATP synthase, F0 complex, subunit A, active site PF552_18325 IPR035908 ATP synthase, F0 complex, subunit A superfamily PF552_18345 IPR017882 Zinc import ATP-binding protein ZnuC PF552_18345 IPR003593 AAA+ ATPase domain PF552_18345 IPR003439 ABC transporter-like PF552_18345 IPR017871 ABC transporter, conserved site PF552_18345 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_18350 IPR037294 ABC transporter, BtuC-like PF552_18350 IPR001626 ABC transporter, TroCD-like PF552_18355 IPR001123 Amino acid exporter protein, LeuE-type PF552_18355 IPR004778 Homoserine/Threonine efflux protein PF552_18360 IPR011008 Dimeric alpha-beta barrel PF552_18360 IPR006314 Dyp-type peroxidase PF552_18370 IPR012301 Malic enzyme, N-terminal domain PF552_18370 IPR015884 Malic enzyme, conserved site PF552_18370 IPR037062 Malic enzyme, N-terminal domain superfamily PF552_18370 IPR012302 Malic enzyme, NAD-binding PF552_18370 IPR001891 Malic oxidoreductase PF552_18370 IPR036291 NAD(P)-binding domain superfamily PF552_18370 IPR023667 NAD-dependent malic enzyme, proteobacteria PF552_18375 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PF552_18375 IPR035684 Arginyl-tRNA synthetase, catalytic core domain PF552_18375 IPR008909 DALR anticodon binding PF552_18375 IPR005148 Arginyl tRNA synthetase N-terminal domain PF552_18375 IPR001278 Arginine-tRNA ligase PF552_18375 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily PF552_18395 IPR011051 RmlC-like cupin domain superfamily PF552_18395 IPR012093 Pirin PF552_18395 IPR008778 Pirin, C-terminal domain PF552_18395 IPR003829 Pirin, N-terminal domain PF552_18395 IPR014710 RmlC-like jelly roll fold PF552_18405 IPR036390 Winged helix DNA-binding domain superfamily PF552_18405 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_18405 IPR005149 Transcription regulator PadR, N-terminal PF552_18410 IPR002934 Polymerase, nucleotidyl transferase domain PF552_18410 IPR025184 Domain of unknown function DUF4111 PF552_18410 IPR024172 Streptomycin 3''-adenylyltransferase PF552_18415 IPR029062 Class I glutamine amidotransferase-like PF552_18415 IPR017926 Glutamine amidotransferase PF552_18415 IPR001674 GMP synthase, C-terminal PF552_18415 IPR004739 GMP synthase, glutamine amidotransferase PF552_18415 IPR022955 GMP synthase PF552_18415 IPR025777 GMP synthetase ATP pyrophosphatase domain PF552_18415 IPR022310 NAD/GMP synthase PF552_18415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_18420 IPR007383 Protein of unknown function DUF445 PF552_18420 IPR016991 Protein of unknown function UCP032178 PF552_18425 IPR032808 DoxX family PF552_18430 IPR032818 DedA family PF552_18430 IPR032816 SNARE associated Golgi protein PF552_18445 IPR025669 AAA domain PF552_18445 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_18455 IPR002634 BolA protein PF552_18455 IPR036065 BolA-like superfamily PF552_18470 IPR008278 4'-phosphopantetheinyl transferase domain PF552_18470 IPR037143 4'-phosphopantetheinyl transferase domain superfamily PF552_18470 IPR004568 Phosphopantetheine-protein transferase domain PF552_18475 IPR029058 Alpha/Beta hydrolase fold PF552_18475 IPR000073 Alpha/beta hydrolase fold-1 PF552_18475 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase PF552_18490 IPR010071 Amino acid adenylation domain PF552_18490 IPR029058 Alpha/Beta hydrolase fold PF552_18490 IPR036736 ACP-like superfamily PF552_18490 IPR025110 AMP-binding enzyme, C-terminal domain PF552_18490 IPR000873 AMP-dependent synthetase/ligase PF552_18490 IPR042099 AMP-dependent synthetase-like superfamily PF552_18490 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PF552_18490 IPR001242 Condensation domain PF552_18490 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PF552_18490 IPR009081 Phosphopantetheine binding ACP domain PF552_18490 IPR006162 Phosphopantetheine attachment site PF552_18490 IPR001031 Thioesterase PF552_18490 IPR020845 AMP-binding, conserved site PF552_18495 IPR020615 Thiolase, acyl-enzyme intermediate active site PF552_18495 IPR001031 Thioesterase PF552_18495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_18495 IPR006162 Phosphopantetheine attachment site PF552_18495 IPR009081 Phosphopantetheine binding ACP domain PF552_18495 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PF552_18495 IPR042104 Polyketide synthase, dehydratase domain superfamily PF552_18495 IPR013217 Methyltransferase type 12 PF552_18495 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PF552_18495 IPR032821 Ketoacyl-synthetase, C-terminal extension PF552_18495 IPR014030 Beta-ketoacyl synthase, N-terminal PF552_18495 IPR014031 Beta-ketoacyl synthase, C-terminal PF552_18495 IPR018201 Beta-ketoacyl synthase, active site PF552_18495 IPR036736 ACP-like superfamily PF552_18495 IPR020807 Polyketide synthase, dehydratase domain PF552_18495 IPR016039 Thiolase-like PF552_18495 IPR029058 Alpha/Beta hydrolase fold PF552_18500 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_18500 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_18500 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_18500 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_18500 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_18500 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_18500 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_18505 IPR042099 AMP-dependent synthetase-like superfamily PF552_18505 IPR000873 AMP-dependent synthetase/ligase PF552_18510 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_18510 IPR000792 Transcription regulator LuxR, C-terminal PF552_18510 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PF552_18510 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PF552_18510 IPR016032 Signal transduction response regulator, C-terminal effector PF552_18520 IPR016181 Acyl-CoA N-acyltransferase PF552_18520 IPR001690 Autoinducer synthase PF552_18525 IPR005828 Major facilitator, sugar transporter-like PF552_18525 IPR004736 MFS transporter, metabolite:H symporter PF552_18525 IPR011701 Major facilitator superfamily PF552_18525 IPR005829 Sugar transporter, conserved site PF552_18525 IPR036259 MFS transporter superfamily PF552_18525 IPR020846 Major facilitator superfamily domain PF552_18530 IPR029045 ClpP/crotonase-like domain superfamily PF552_18530 IPR001753 Enoyl-CoA hydratase/isomerase PF552_18530 IPR014748 Enoyl-CoA hydratase, C-terminal PF552_18530 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PF552_18535 IPR029045 ClpP/crotonase-like domain superfamily PF552_18535 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PF552_18535 IPR014748 Enoyl-CoA hydratase, C-terminal PF552_18535 IPR001753 Enoyl-CoA hydratase/isomerase PF552_18540 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PF552_18540 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PF552_18540 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PF552_18540 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PF552_18540 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PF552_18540 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PF552_18540 IPR006089 Acyl-CoA dehydrogenase, conserved site PF552_18545 IPR042099 AMP-dependent synthetase-like superfamily PF552_18545 IPR000873 AMP-dependent synthetase/ligase PF552_18545 IPR020845 AMP-binding, conserved site PF552_18545 IPR025110 AMP-binding enzyme, C-terminal domain PF552_18550 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain PF552_18550 IPR011548 3-hydroxyisobutyrate dehydrogenase PF552_18550 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PF552_18550 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_18550 IPR015815 3-hydroxyisobutyrate dehydrogenase-related PF552_18550 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site PF552_18550 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PF552_18550 IPR036291 NAD(P)-binding domain superfamily PF552_18555 IPR016162 Aldehyde dehydrogenase, N-terminal PF552_18555 IPR016161 Aldehyde/histidinol dehydrogenase PF552_18555 IPR016163 Aldehyde dehydrogenase, C-terminal PF552_18555 IPR016160 Aldehyde dehydrogenase, cysteine active site PF552_18555 IPR015590 Aldehyde dehydrogenase domain PF552_18555 IPR010061 Methylmalonate-semialdehyde dehydrogenase PF552_18565 IPR004840 Amino acid permease, conserved site PF552_18565 IPR004841 Amino acid permease/ SLC12A domain PF552_18570 IPR004841 Amino acid permease/ SLC12A domain PF552_18570 IPR004840 Amino acid permease, conserved site PF552_18575 IPR035709 RutC family, YoaB-like PF552_18575 IPR019897 RidA, conserved site PF552_18575 IPR035959 RutC-like superfamily PF552_18575 IPR006175 YjgF/YER057c/UK114 family PF552_18580 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PF552_18580 IPR011079 Alanine racemase, C-terminal PF552_18580 IPR001608 Alanine racemase, N-terminal PF552_18580 IPR000821 Alanine racemase PF552_18580 IPR029066 PLP-binding barrel PF552_18580 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site PF552_18585 IPR036188 FAD/NAD(P)-binding domain superfamily PF552_18585 IPR006076 FAD dependent oxidoreductase PF552_18585 IPR023080 D-amino acid dehydrogenase DadA PF552_18590 IPR011991 ArsR-like helix-turn-helix domain PF552_18590 IPR000485 AsnC-type HTH domain PF552_18590 IPR036390 Winged helix DNA-binding domain superfamily PF552_18590 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_18590 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PF552_18590 IPR019888 Transcription regulator AsnC-type PF552_18590 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PF552_18590 IPR011008 Dimeric alpha-beta barrel PF552_18600 IPR010105 TonB-dependent siderophore receptor PF552_18600 IPR000531 TonB-dependent receptor-like, beta-barrel PF552_18600 IPR039423 TonB-dependent receptor-like PF552_18600 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PF552_18600 IPR012910 TonB-dependent receptor, plug domain PF552_18600 IPR037066 TonB-dependent receptor, plug domain superfamily PF552_18615 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PF552_18615 IPR006225 Pseudouridine synthase, RluC/RluD PF552_18615 IPR006145 Pseudouridine synthase, RsuA/RluA PF552_18615 IPR020103 Pseudouridine synthase, catalytic domain superfamily PF552_18645 IPR022927 RNA pyrophosphohydrolase RppH PF552_18645 IPR015797 NUDIX hydrolase-like domain superfamily PF552_18645 IPR020084 NUDIX hydrolase, conserved site PF552_18645 IPR020476 NUDIX hydrolase PF552_18645 IPR000086 NUDIX hydrolase domain PF552_18665 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PF552_18665 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain PF552_18665 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PF552_18665 IPR006249 Aconitase/Iron-responsive element-binding protein 2 PF552_18665 IPR036008 Aconitase, iron-sulfur domain PF552_18665 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain PF552_18665 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent PF552_18670 IPR011278 2-methylcitrate synthase/citrate synthase type I PF552_18670 IPR016143 Citrate synthase-like, small alpha subdomain PF552_18670 IPR019810 Citrate synthase active site PF552_18670 IPR024176 Citrate synthase, bacterial-type PF552_18670 IPR036969 Citrate synthase superfamily PF552_18670 IPR016142 Citrate synthase-like, large alpha subdomain PF552_18670 IPR002020 Citrate synthase PF552_18675 IPR039556 ICL/PEPM domain PF552_18675 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site PF552_18675 IPR012695 2-methylisocitrate lyase PF552_18675 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PF552_18675 IPR040442 Pyruvate kinase-like domain superfamily PF552_18680 IPR036390 Winged helix DNA-binding domain superfamily PF552_18680 IPR000524 Transcription regulator HTH, GntR PF552_18680 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_18680 IPR008920 Transcription regulator FadR/GntR, C-terminal PF552_18680 IPR011711 GntR, C-terminal PF552_18680 IPR000485 AsnC-type HTH domain PF552_18690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_18690 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_18690 IPR015424 Pyridoxal phosphate-dependent transferase PF552_18690 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site PF552_18690 IPR000796 Aspartate/other aminotransferase PF552_18690 IPR004839 Aminotransferase, class I/classII PF552_18695 IPR016167 FAD-binding, type PCMH, subdomain 1 PF552_18695 IPR016166 FAD-binding domain, PCMH-type PF552_18695 IPR012256 D-lactate dehydrogenase PF552_18695 IPR006094 FAD linked oxidase, N-terminal PF552_18695 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 PF552_18695 IPR016169 FAD-binding, type PCMH, subdomain 2 PF552_18695 IPR036318 FAD-binding, type PCMH-like superfamily PF552_18695 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 PF552_18695 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal PF552_18695 IPR016164 FAD-linked oxidase-like, C-terminal PF552_18700 IPR020920 L-lactate dehydrogenase, bacterial PF552_18700 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site PF552_18700 IPR037396 FMN hydroxy acid dehydrogenase domain PF552_18700 IPR013785 Aldolase-type TIM barrel PF552_18700 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent PF552_18700 IPR000262 FMN-dependent dehydrogenase PF552_18705 IPR036390 Winged helix DNA-binding domain superfamily PF552_18705 IPR011711 GntR, C-terminal PF552_18705 IPR008920 Transcription regulator FadR/GntR, C-terminal PF552_18705 IPR000524 Transcription regulator HTH, GntR PF552_18705 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_18710 IPR003804 L-lactate permease PF552_18715 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I PF552_18715 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III PF552_18715 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III PF552_18715 IPR005843 Alpha-D-phosphohexomutase, C-terminal PF552_18715 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily PF552_18715 IPR016066 Alpha-D-phosphohexomutase, conserved site PF552_18715 IPR005841 Alpha-D-phosphohexomutase superfamily PF552_18715 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II PF552_18720 IPR005886 UDP-glucose 4-epimerase PF552_18720 IPR016040 NAD(P)-binding domain PF552_18720 IPR036291 NAD(P)-binding domain superfamily PF552_18725 IPR001672 Phosphoglucose isomerase (PGI) PF552_18725 IPR023096 Phosphoglucose isomerase, C-terminal PF552_18725 IPR035476 Phosphoglucose isomerase, SIS domain 1 PF552_18725 IPR035482 Phosphoglucose isomerase, SIS domain 2 PF552_18725 IPR018189 Phosphoglucose isomerase, conserved site PF552_18730 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily PF552_18730 IPR017476 UDP-glucose/GDP-mannose dehydrogenase PF552_18730 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal PF552_18730 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation PF552_18730 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal PF552_18730 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type PF552_18730 IPR036291 NAD(P)-binding domain superfamily PF552_18730 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_18735 IPR029044 Nucleotide-diphospho-sugar transferases PF552_18735 IPR005835 Nucleotidyl transferase domain PF552_18735 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type PF552_18740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_18740 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain PF552_18740 IPR036291 NAD(P)-binding domain superfamily PF552_18745 IPR015424 Pyridoxal phosphate-dependent transferase PF552_18745 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PF552_18745 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PF552_18745 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PF552_18750 IPR041561 PglD, N-terminal PF552_18750 IPR020019 Sialic acid O-acyltransferase NeuD-like PF552_18750 IPR011004 Trimeric LpxA-like superfamily PF552_18750 IPR001451 Hexapeptide repeat PF552_18755 IPR003362 Bacterial sugar transferase PF552_18760 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PF552_18760 IPR001296 Glycosyl transferase, family 1 PF552_18770 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PF552_18770 IPR001296 Glycosyl transferase, family 1 PF552_18785 IPR036291 NAD(P)-binding domain superfamily PF552_18785 IPR001509 NAD-dependent epimerase/dehydratase PF552_18790 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation PF552_18790 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal PF552_18790 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase PF552_18790 IPR017476 UDP-glucose/GDP-mannose dehydrogenase PF552_18790 IPR036291 NAD(P)-binding domain superfamily PF552_18790 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PF552_18790 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily PF552_18790 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal PF552_18795 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain PF552_18795 IPR019554 Soluble ligand binding domain PF552_18795 IPR003715 Polysaccharide export protein PF552_18800 IPR023485 Phosphotyrosine protein phosphatase I PF552_18800 IPR036196 Phosphotyrosine protein phosphatase I superfamily PF552_18800 IPR017867 Protein-tyrosine phosphatase, low molecular weight PF552_18805 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_18805 IPR025669 AAA domain PF552_18805 IPR005702 Exopolysaccharide synthesis protein PF552_18805 IPR003856 Polysaccharide chain length determinant N-terminal domain PF552_18805 IPR032807 Tyrosine kinase, G-rich domain PF552_18810 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily PF552_18810 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal PF552_18810 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PF552_18810 IPR008104 Macrophage infectivity potentiator PF552_18815 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PF552_18815 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily PF552_18815 IPR008104 Macrophage infectivity potentiator PF552_18815 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal PF552_18820 IPR004268 Peptidoglycan biosynthesis protein MurJ PF552_18825 IPR002502 N-acetylmuramoyl-L-alanine amidase domain PF552_18825 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily PF552_18830 IPR013785 Aldolase-type TIM barrel PF552_18830 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD PF552_18830 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal PF552_18830 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily PF552_18830 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal PF552_18830 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal PF552_18830 IPR004393 Nicotinate-nucleotide pyrophosphorylase PF552_18840 IPR006311 Twin-arginine translocation pathway, signal sequence PF552_18840 IPR008475 Bacterial phospholipase C, C-terminal domain PF552_18840 IPR007312 Phosphoesterase PF552_18840 IPR017767 Bacterial phospholipase C, phosphocholine-specific PF552_18840 IPR017850 Alkaline-phosphatase-like, core domain superfamily PF552_18850 IPR027408 PNPase/RNase PH domain superfamily PF552_18850 IPR018336 Ribonuclease PH, conserved site PF552_18850 IPR002381 Ribonuclease PH, bacterial-type PF552_18850 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_18850 IPR036345 Exoribonuclease, PH domain 2 superfamily PF552_18850 IPR015847 Exoribonuclease, phosphorolytic domain 2 PF552_18850 IPR001247 Exoribonuclease, phosphorolytic domain 1 PF552_18855 IPR005804 Fatty acid desaturase domain PF552_18860 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PF552_18860 IPR000971 Globin PF552_18860 IPR009050 Globin-like superfamily PF552_18860 IPR012292 Globin/Protoglobin PF552_18860 IPR023950 Flavohemoprotein PF552_18860 IPR001433 Oxidoreductase FAD/NAD(P)-binding PF552_18860 IPR017938 Riboflavin synthase-like beta-barrel PF552_18860 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PF552_18860 IPR017927 FAD-binding domain, ferredoxin reductase-type PF552_18865 IPR023764 Transcriptional repressor HTH, FabR PF552_18865 IPR001647 DNA-binding HTH domain, TetR-type PF552_18865 IPR009057 Homeobox-like domain superfamily PF552_18870 IPR013571 Transcription regulator QacR, C-terminal PF552_18870 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PF552_18870 IPR001647 DNA-binding HTH domain, TetR-type PF552_18870 IPR009057 Homeobox-like domain superfamily PF552_18870 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PF552_18875 IPR013766 Thioredoxin domain PF552_18875 IPR017937 Thioredoxin, conserved site PF552_18875 IPR036249 Thioredoxin-like superfamily PF552_18875 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL PF552_18875 IPR001853 DSBA-like thioredoxin domain PF552_18880 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF552_18880 IPR010233 Ubiquinone biosynthesis O-methyltransferase PF552_18885 IPR041492 Haloacid dehalogenase-like hydrolase PF552_18885 IPR036412 HAD-like superfamily PF552_18885 IPR006439 HAD hydrolase, subfamily IA PF552_18885 IPR023214 HAD superfamily PF552_18885 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PF552_18885 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic PF552_18890 IPR036291 NAD(P)-binding domain superfamily PF552_18890 IPR020904 Short-chain dehydrogenase/reductase, conserved site PF552_18890 IPR002347 Short-chain dehydrogenase/reductase SDR PF552_18905 IPR010167 Amino-acid N-acetyltransferase PF552_18905 IPR033719 N-acetylglutamate synthase, kinase-like domain PF552_18905 IPR000182 GNAT domain PF552_18905 IPR036393 Acetylglutamate kinase-like superfamily PF552_18905 IPR016181 Acyl-CoA N-acyltransferase PF552_18905 IPR001048 Aspartate/glutamate/uridylate kinase PF552_18925 IPR010067 Aliphatic sulfonates-binding protein PF552_18925 IPR015168 SsuA/THI5-like PF552_18925 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PF552_18930 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent PF552_18930 IPR036661 Luciferase-like domain superfamily PF552_18930 IPR011251 Luciferase-like domain PF552_18935 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PF552_18935 IPR035906 MetI-like superfamily PF552_18940 IPR003593 AAA+ ATPase domain PF552_18940 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_18940 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB PF552_18940 IPR003439 ABC transporter-like PF552_18945 IPR019915 Transcription regulator, pyrimidine utilisation, RutR PF552_18945 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PF552_18945 IPR001647 DNA-binding HTH domain, TetR-type PF552_18945 IPR009057 Homeobox-like domain superfamily PF552_18945 IPR013573 Transcription regulator YcdC, C-terminal PF552_18950 IPR035994 Nucleoside phosphorylase superfamily PF552_18950 IPR000845 Nucleoside phosphorylase domain PF552_18950 IPR010049 MTA/SAH nucleosidase PF552_18960 IPR023468 Riboflavin kinase PF552_18960 IPR002606 Riboflavin kinase, bacterial PF552_18960 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic PF552_18960 IPR023465 Riboflavin kinase domain superfamily PF552_18960 IPR015864 FAD synthetase PF552_18960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_18965 IPR010663 Zinc finger, FPG/IleRS-type PF552_18965 IPR002301 Isoleucine-tRNA ligase PF552_18965 IPR023585 Isoleucine-tRNA ligase, type 1 PF552_18965 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PF552_18965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PF552_18965 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PF552_18965 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PF552_18965 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain PF552_18965 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PF552_18965 IPR002300 Aminoacyl-tRNA synthetase, class Ia PF552_18970 IPR001872 Peptidase A8, signal peptidase II PF552_18975 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PF552_19015 IPR029000 Cyclophilin-like domain superfamily PF552_19015 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site PF552_19015 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain PF552_19020 IPR029058 Alpha/Beta hydrolase fold PF552_19020 IPR013094 Alpha/beta hydrolase fold-3 PF552_19040 IPR005119 LysR, substrate-binding PF552_19040 IPR000847 Transcription regulator HTH, LysR PF552_19040 IPR036388 Winged helix-like DNA-binding domain superfamily PF552_19040 IPR036390 Winged helix DNA-binding domain superfamily PF552_19045 IPR009012 GrpE nucleotide exchange factor, head PF552_19045 IPR013805 GrpE nucleotide exchange factor, coiled-coil PF552_19045 IPR000740 GrpE nucleotide exchange factor PF552_19050 IPR013126 Heat shock protein 70 family PF552_19050 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily PF552_19050 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily PF552_19050 IPR018181 Heat shock protein 70, conserved site PF552_19050 IPR012725 Chaperone DnaK PF552_19070 IPR031304 Transglycosylase SLT domain 2 PF552_19070 IPR023346 Lysozyme-like domain superfamily PF552_19070 IPR011757 Lytic transglycosylase MltB PF552_19075 IPR013815 ATP-grasp fold, subdomain 1 PF552_19075 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain PF552_19075 IPR011054 Rudiment single hybrid motif PF552_19075 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit PF552_19075 IPR011761 ATP-grasp fold PF552_19075 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PF552_19075 IPR016185 Pre-ATP-grasp domain superfamily PF552_19080 IPR000031 PurE domain PF552_19080 IPR024694 PurE, prokaryotic type PF552_19080 IPR035893 PurE domain superfamily PF552_19080 IPR033747 Class I PurE PF552_19090 IPR005757 Murein peptide ligase PF552_19090 IPR036565 Mur-like, catalytic domain superfamily PF552_19090 IPR000713 Mur ligase, N-terminal catalytic domain PF552_19090 IPR013221 Mur ligase, central PF552_19090 IPR004101 Mur ligase, C-terminal PF552_19090 IPR036615 Mur ligase, C-terminal domain superfamily PF552_19100 IPR033879 Undecaprenyl-diphosphatase PF552_19100 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PF552_19100 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PF552_19105 IPR022369 Integral membrane protein TerC, riboswitch-linked PF552_19105 IPR005496 Integral membrane protein TerC PF552_19115 IPR016185 Pre-ATP-grasp domain superfamily PF552_19115 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain PF552_19120 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PF552_19120 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site PF552_19120 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PF552_19125 IPR032466 Metal-dependent hydrolase PF552_19125 IPR014311 Guanine deaminase PF552_19125 IPR006680 Amidohydrolase-related PF552_19125 IPR011059 Metal-dependent hydrolase, composite domain superfamily PF552_19130 IPR000836 Phosphoribosyltransferase domain PF552_19130 IPR029057 Phosphoribosyltransferase-like PF552_19130 IPR005904 Hypoxanthine phosphoribosyl transferase PF552_19140 IPR033954 Disulphide bond isomerase, DsbC/G PF552_19140 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily PF552_19140 IPR012336 Thioredoxin-like fold PF552_19140 IPR036249 Thioredoxin-like superfamily PF552_19140 IPR017937 Thioredoxin, conserved site PF552_19140 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PF552_19145 IPR002524 Cation efflux protein PF552_19145 IPR027470 Cation efflux protein, cytoplasmic domain PF552_19145 IPR036837 Cation efflux protein, cytoplasmic domain superfamily PF552_19145 IPR027469 Cation efflux transmembrane domain superfamily PF552_19150 IPR038390 Metal-sensitive transcriptional repressor superfamily PF552_19150 IPR003735 Metal-sensitive transcriptional repressor PF552_19155 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_19155 IPR005225 Small GTP-binding protein domain PF552_19155 IPR027368 tRNA modification GTPase MnmE domain 2 PF552_19155 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 PF552_19155 IPR004520 tRNA modification GTPase MnmE PF552_19155 IPR025867 MnmE, helical domain PF552_19155 IPR018948 GTP-binding protein TrmE, N-terminal PF552_19155 IPR031168 TrmE-type guanine nucleotide-binding domain PF552_19155 IPR006073 GTP binding domain PF552_19160 IPR019998 Membrane insertase YidC PF552_19160 IPR028055 Membrane insertase YidC/Oxa1, C-terminal PF552_19160 IPR028053 Membrane insertase YidC, N-terminal PF552_19160 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 PF552_19160 IPR038210 Membrane insertase YidC, periplasmic domain PF552_19160 IPR038221 YidC, periplasmic domain superfamily PF552_19165 IPR002696 Putative membrane protein insertion efficiency factor PF552_19170 IPR020539 Ribonuclease P, conserved site PF552_19170 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PF552_19170 IPR000100 Ribonuclease P PF552_19170 IPR020568 Ribosomal protein S5 domain 2-type fold PF552_19175 IPR000271 Ribosomal protein L34 PF552_19175 IPR020939 Ribosomal protein L34, conserved site PF552_19180 IPR029058 Alpha/Beta hydrolase fold PF552_19180 IPR000801 Putative esterase PF552_19180 IPR014186 S-formylglutathione hydrolase PF552_19190 IPR014183 Alcohol dehydrogenase class III PF552_19190 IPR020843 Polyketide synthase, enoylreductase domain PF552_19190 IPR036291 NAD(P)-binding domain superfamily PF552_19190 IPR013149 Alcohol dehydrogenase, C-terminal PF552_19190 IPR013154 Alcohol dehydrogenase, N-terminal PF552_19190 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PF552_19190 IPR011032 GroES-like superfamily PF552_19195 IPR003735 Metal-sensitive transcriptional repressor PF552_19195 IPR038390 Metal-sensitive transcriptional repressor superfamily PF552_19235 IPR027417 P-loop containing nucleoside triphosphate hydrolase PF552_19235 IPR005053 MobA/MobL protein PF552_19235 IPR014136 Ti-type conjugative transfer relaxase TraA PF552_19235 IPR027351 (+) RNA virus helicase core domain PF552_19235 IPR041533 Bartonella effector protein, BID domain PF552_19265 IPR009241 Toxin HigB-like