locus-tag class description PF575_00005 PF00308 Bacterial dnaA protein PF575_00005 PF08299 Bacterial dnaA protein helix-turn-helix PF575_00005 PF11638 DnaA N-terminal domain PF575_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain PF575_00010 PF02767 DNA polymerase III beta subunit, central domain PF575_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain PF575_00015 PF02463 RecF/RecN/SMC N terminal domain PF575_00020 PF00204 DNA gyrase B PF575_00020 PF00986 DNA gyrase B subunit, carboxyl terminus PF575_00020 PF18053 DNA gyrase B subunit insert domain PF575_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_00020 PF01751 Toprim domain PF575_00030 PF09335 SNARE associated Golgi protein PF575_00035 PF00005 ABC transporter PF575_00035 PF12848 ABC transporter PF575_00055 PF01521 Iron-sulphur cluster biosynthesis PF575_00060 PF00561 alpha/beta hydrolase fold PF575_00065 PF03702 Anhydro-N-acetylmuramic acid kinase PF575_00070 PF00579 tRNA synthetases class I (W and Y) PF575_00110 PF00209 Sodium:neurotransmitter symporter family PF575_00120 PF01189 16S rRNA methyltransferase RsmB/F PF575_00120 PF01029 NusB family PF575_00125 PF02911 Formyl transferase, C-terminal domain PF575_00125 PF00551 Formyl transferase PF575_00130 PF00920 Dehydratase family PF575_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_00145 PF03466 LysR substrate binding domain PF575_00150 PF00860 Permease family PF575_00155 PF00311 Phosphoenolpyruvate carboxylase PF575_00165 PF13610 DDE domain PF575_00170 PF10706 Aminoglycoside-2''-adenylyltransferase PF575_00175 PF01636 Phosphotransferase enzyme family PF575_00180 PF00005 ABC transporter PF575_00185 PF13610 DDE domain PF575_00200 PF00392 Bacterial regulatory proteins, gntR family PF575_00200 PF07702 UTRA domain PF575_00210 PF07683 Cobalamin synthesis protein cobW C-terminal domain PF575_00210 PF02492 CobW/HypB/UreG, nucleotide-binding domain PF575_00220 PF00324 Amino acid permease PF575_00230 PF02798 Glutathione S-transferase, N-terminal domain PF575_00230 PF14497 Glutathione S-transferase, C-terminal domain PF575_00235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF575_00245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF575_00250 PF04463 Protein of unknown function (DUF523) PF575_00260 PF01758 Sodium Bile acid symporter family PF575_00265 PF00857 Isochorismatase family PF575_00270 PF00701 Dihydrodipicolinate synthetase family PF575_00280 PF01259 SAICAR synthetase PF575_00290 PF01226 Formate/nitrite transporter PF575_00295 PF00004 ATPase family associated with various cellular activities (AAA) PF575_00295 PF16193 AAA C-terminal domain PF575_00295 PF12002 MgsA AAA+ ATPase C terminal PF575_00300 PF07995 Glucose / Sorbosone dehydrogenase PF575_00305 PF03692 Putative zinc- or iron-chelating domain PF575_00310 PF07043 Protein of unknown function (DUF1328) PF575_00325 PF10576 Iron-sulfur binding domain of endonuclease III PF575_00325 PF00633 Helix-hairpin-helix motif PF575_00325 PF14815 NUDIX domain PF575_00325 PF00730 HhH-GPD superfamily base excision DNA repair protein PF575_00340 PF03352 Methyladenine glycosylase PF575_00345 PF00107 Zinc-binding dehydrogenase PF575_00345 PF08240 Alcohol dehydrogenase GroES-like domain PF575_00350 PF00392 Bacterial regulatory proteins, gntR family PF575_00350 PF00155 Aminotransferase class I and II PF575_00365 PF03466 LysR substrate binding domain PF575_00365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_00370 PF00248 Aldo/keto reductase family PF575_00375 PF07690 Major Facilitator Superfamily PF575_00385 PF05173 Dihydrodipicolinate reductase, C-terminus PF575_00385 PF01113 Dihydrodipicolinate reductase, N-terminus PF575_00395 PF01556 DnaJ C terminal domain PF575_00395 PF00684 DnaJ central domain PF575_00395 PF00226 DnaJ domain PF575_00405 PF00873 AcrB/AcrD/AcrF family PF575_00410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF575_00420 PF13610 DDE domain PF575_00435 PF01636 Phosphotransferase enzyme family PF575_00440 PF13610 DDE domain PF575_00450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF575_00450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF575_00450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF575_00450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PF575_00455 PF00809 Pterin binding enzyme PF575_00505 PF00717 Peptidase S24-like PF575_00510 PF11799 impB/mucB/samB family C-terminal domain PF575_00510 PF11798 IMS family HHH motif PF575_00510 PF00817 impB/mucB/samB family PF575_00510 PF13438 Domain of unknown function (DUF4113) PF575_00545 PF13610 DDE domain PF575_00555 PF00324 Amino acid permease PF575_00565 PF00171 Aldehyde dehydrogenase family PF575_00570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PF575_00570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PF575_00575 PF00501 AMP-binding enzyme PF575_00575 PF13193 AMP-binding enzyme C-terminal domain PF575_00580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_00580 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_00580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_00585 PF00378 Enoyl-CoA hydratase/isomerase PF575_00590 PF00378 Enoyl-CoA hydratase/isomerase PF575_00595 PF00083 Sugar (and other) transporter PF575_00595 PF07690 Major Facilitator Superfamily PF575_00600 PF00765 Autoinducer synthase PF575_00610 PF03472 Autoinducer binding domain PF575_00610 PF00196 Bacterial regulatory proteins, luxR family PF575_00615 PF00501 AMP-binding enzyme PF575_00620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_00620 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_00620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_00625 PF16197 Ketoacyl-synthetase C-terminal extension PF575_00625 PF00550 Phosphopantetheine attachment site PF575_00625 PF08242 Methyltransferase domain PF575_00625 PF02801 Beta-ketoacyl synthase, C-terminal domain PF575_00625 PF00109 Beta-ketoacyl synthase, N-terminal domain PF575_00625 PF14765 Polyketide synthase dehydratase PF575_00625 PF00975 Thioesterase domain PF575_00630 PF00975 Thioesterase domain PF575_00630 PF00668 Condensation domain PF575_00630 PF13193 AMP-binding enzyme C-terminal domain PF575_00630 PF00550 Phosphopantetheine attachment site PF575_00630 PF00501 AMP-binding enzyme PF575_00645 PF16363 GDP-mannose 4,6 dehydratase PF575_00665 PF13817 IS66 C-terminal element PF575_00665 PF03050 Transposase IS66 family PF575_00665 PF13005 zinc-finger binding domain of transposase IS66 PF575_00665 PF13007 Transposase C of IS166 homeodomain PF575_00685 PF01722 BolA-like protein PF575_00695 PF13614 AAA domain PF575_00710 PF09335 SNARE associated Golgi protein PF575_00715 PF07681 DoxX PF575_00720 PF04286 Protein of unknown function (DUF445) PF575_00725 PF02540 NAD synthase PF575_00725 PF00117 Glutamine amidotransferase class-I PF575_00725 PF00958 GMP synthase C terminal domain PF575_00730 PF01909 Nucleotidyltransferase domain PF575_00730 PF13427 Domain of unknown function (DUF4111) PF575_00735 PF03551 Transcriptional regulator PadR-like family PF575_00745 PF05726 Pirin C-terminal cupin domain PF575_00745 PF02678 Pirin PF575_00765 PF03485 Arginyl tRNA synthetase N terminal domain PF575_00765 PF05746 DALR anticodon binding domain PF575_00765 PF00750 tRNA synthetases class I (R) PF575_00770 PF00390 Malic enzyme, N-terminal domain PF575_00770 PF03949 Malic enzyme, NAD binding domain PF575_00780 PF04261 Dyp-type peroxidase family PF575_00785 PF01810 LysE type translocator PF575_00790 PF00950 ABC 3 transport family PF575_00795 PF00005 ABC transporter PF575_00815 PF00119 ATP synthase A chain PF575_00820 PF00137 ATP synthase subunit C PF575_00825 PF00430 ATP synthase B/B' CF(0) PF575_00830 PF00213 ATP synthase delta (OSCP) subunit PF575_00835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PF575_00835 PF00306 ATP synthase alpha/beta chain, C terminal domain PF575_00835 PF02874 ATP synthase alpha/beta family, beta-barrel domain PF575_00840 PF00231 ATP synthase PF575_00845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PF575_00845 PF02874 ATP synthase alpha/beta family, beta-barrel domain PF575_00850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PF575_00855 PF11008 Protein of unknown function (DUF2846) PF575_00865 PF00255 Glutathione peroxidase PF575_00875 PF07690 Major Facilitator Superfamily PF575_00880 PF00440 Bacterial regulatory proteins, tetR family PF575_00885 PF00892 EamA-like transporter family PF575_00890 PF01300 Telomere recombination PF575_00895 PF02481 DNA recombination-mediator protein A PF575_00895 PF17782 DprA winged helix domain PF575_00905 PF01327 Polypeptide deformylase PF575_00965 PF00291 Pyridoxal-phosphate dependent enzyme PF575_00975 PF03358 NADPH-dependent FMN reductase PF575_00995 PF08497 Radical SAM N-terminal PF575_00995 PF04055 Radical SAM superfamily PF575_00995 PF11842 Domain of unknown function (DUF3362) PF575_01015 PF00817 impB/mucB/samB family PF575_01015 PF11799 impB/mucB/samB family C-terminal domain PF575_01015 PF11798 IMS family HHH motif PF575_01025 PF07690 Major Facilitator Superfamily PF575_01030 PF03641 Possible lysine decarboxylase PF575_01035 PF03471 Transporter associated domain PF575_01035 PF03741 Integral membrane protein TerC family PF575_01040 PF02810 SEC-C motif PF575_01045 PF03458 UPF0126 domain PF575_01050 PF07690 Major Facilitator Superfamily PF575_01055 PF03989 DNA gyrase C-terminal domain, beta-propeller PF575_01055 PF00521 DNA gyrase/topoisomerase IV, subunit A PF575_01060 PF13193 AMP-binding enzyme C-terminal domain PF575_01060 PF00501 AMP-binding enzyme PF575_01075 PF00719 Inorganic pyrophosphatase PF575_01080 PF03573 outer membrane porin, OprD family PF575_01095 PF00701 Dihydrodipicolinate synthetase family PF575_01100 PF00596 Class II Aldolase and Adducin N-terminal domain PF575_01105 PF00155 Aminotransferase class I and II PF575_01105 PF00392 Bacterial regulatory proteins, gntR family PF575_01120 PF00665 Integrase core domain PF575_01145 PF13007 Transposase C of IS166 homeodomain PF575_01145 PF13817 IS66 C-terminal element PF575_01145 PF03050 Transposase IS66 family PF575_01145 PF13005 zinc-finger binding domain of transposase IS66 PF575_01155 PF00440 Bacterial regulatory proteins, tetR family PF575_01175 PF17954 Quercetinase C-terminal cupin domain PF575_01175 PF02678 Pirin PF575_01180 PF00291 Pyridoxal-phosphate dependent enzyme PF575_01185 PF13309 HTH domain PF575_01185 PF08348 YheO-like PAS domain PF575_01195 PF13193 AMP-binding enzyme C-terminal domain PF575_01195 PF00668 Condensation domain PF575_01195 PF00550 Phosphopantetheine attachment site PF575_01195 PF00501 AMP-binding enzyme PF575_01200 PF00501 AMP-binding enzyme PF575_01200 PF13193 AMP-binding enzyme C-terminal domain PF575_01200 PF00668 Condensation domain PF575_01200 PF00975 Thioesterase domain PF575_01200 PF00550 Phosphopantetheine attachment site PF575_01205 PF01032 FecCD transport family PF575_01210 PF01032 FecCD transport family PF575_01215 PF00005 ABC transporter PF575_01220 PF01497 Periplasmic binding protein PF575_01225 PF07715 TonB-dependent Receptor Plug Domain PF575_01225 PF00593 TonB dependent receptor PF575_01230 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PF575_01265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_01265 PF00512 His Kinase A (phospho-acceptor) domain PF575_01265 PF00672 HAMP domain PF575_01270 PF00072 Response regulator receiver domain PF575_01270 PF00486 Transcriptional regulatory protein, C terminal PF575_01280 PF00394 Multicopper oxidase PF575_01280 PF07731 Multicopper oxidase PF575_01280 PF07732 Multicopper oxidase PF575_01305 PF07664 Ferrous iron transport protein B C terminus PF575_01305 PF02421 Ferrous iron transport protein B PF575_01305 PF07670 Nucleoside recognition PF575_01320 PF13411 MerR HTH family regulatory protein PF575_01370 PF00543 Nitrogen regulatory protein P-II PF575_01375 PF00909 Ammonium Transporter Family PF575_01380 PF03477 ATP cone domain PF575_01385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PF575_01385 PF01872 RibD C-terminal domain PF575_01395 PF00677 Lumazine binding domain PF575_01415 PF00883 Cytosol aminopeptidase family, catalytic domain PF575_01415 PF02789 Cytosol aminopeptidase family, N-terminal domain PF575_01425 PF03739 Lipopolysaccharide export system permease LptF/LptG PF575_01430 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PF575_01430 PF01676 Metalloenzyme superfamily PF575_01435 PF03572 Peptidase family S41 PF575_01435 PF00595 PDZ domain PF575_01440 PF02954 Bacterial regulatory protein, Fis family PF575_01440 PF00072 Response regulator receiver domain PF575_01440 PF00158 Sigma-54 interaction domain PF575_01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_01445 PF00512 His Kinase A (phospho-acceptor) domain PF575_01450 PF00196 Bacterial regulatory proteins, luxR family PF575_01450 PF00072 Response regulator receiver domain PF575_01455 PF00768 D-alanyl-D-alanine carboxypeptidase PF575_01460 PF00291 Pyridoxal-phosphate dependent enzyme PF575_01465 PF03447 Homoserine dehydrogenase, NAD binding domain PF575_01465 PF00742 Homoserine dehydrogenase PF575_01465 PF01842 ACT domain PF575_01470 PF10411 Disulfide bond isomerase protein N-terminus PF575_01470 PF13098 Thioredoxin-like domain PF575_01475 PF00589 Phage integrase family PF575_01475 PF02899 Phage integrase, N-terminal SAM-like domain PF575_01485 PF07670 Nucleoside recognition PF575_01485 PF02421 Ferrous iron transport protein B PF575_01485 PF07664 Ferrous iron transport protein B C terminus PF575_01495 PF02875 Mur ligase family, glutamate ligase domain PF575_01495 PF08245 Mur ligase middle domain PF575_01500 PF01098 Cell cycle protein PF575_01505 PF00749 tRNA synthetases class I (E and Q), catalytic domain PF575_01510 PF01258 Prokaryotic dksA/traR C4-type zinc finger PF575_01515 PF00149 Calcineurin-like phosphoesterase PF575_01520 PF00293 NUDIX domain PF575_01525 PF13667 ThiC-associated domain PF575_01525 PF01964 Radical SAM ThiC family PF575_01540 PF00892 EamA-like transporter family PF575_01545 PF02321 Outer membrane efflux protein PF575_01550 PF01895 PhoU domain PF575_01555 PF04362 Bacterial Fe(2+) trafficking PF575_01560 PF00206 Lyase PF575_01560 PF14698 Argininosuccinate lyase C-terminal PF575_01565 PF07694 5TMR of 5TMR-LYT PF575_01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_01565 PF06580 Histidine kinase PF575_01570 PF04397 LytTr DNA-binding domain PF575_01570 PF00072 Response regulator receiver domain PF575_01575 PF03900 Porphobilinogen deaminase, C-terminal domain PF575_01575 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PF575_01600 PF00816 H-NS histone family PF575_01615 PF00263 Bacterial type II and III secretion system protein PF575_01615 PF03958 Bacterial type II/III secretion system short domain PF575_01620 PF12401 Protein of unknown function (DUF2662) PF575_01620 PF00498 FHA domain PF575_01625 PF13419 Haloacid dehalogenase-like hydrolase PF575_01630 PF04715 Anthranilate synthase component I, N terminal region PF575_01630 PF00425 chorismate binding enzyme PF575_01655 PF03144 Elongation factor Tu domain 2 PF575_01655 PF00009 Elongation factor Tu GTP binding domain PF575_01655 PF03143 Elongation factor Tu C-terminal domain PF575_01665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PF575_01670 PF00467 KOW motif PF575_01670 PF02357 Transcription termination factor nusG PF575_01675 PF00298 Ribosomal protein L11, RNA binding domain PF575_01675 PF03946 Ribosomal protein L11, N-terminal domain PF575_01680 PF00687 Ribosomal protein L1p/L10e family PF575_01685 PF00466 Ribosomal protein L10 PF575_01690 PF16320 Ribosomal protein L7/L12 dimerisation domain PF575_01690 PF00542 Ribosomal protein L7/L12 C-terminal domain PF575_01695 PF04563 RNA polymerase beta subunit PF575_01695 PF04561 RNA polymerase Rpb2, domain 2 PF575_01695 PF04565 RNA polymerase Rpb2, domain 3 PF575_01695 PF10385 RNA polymerase beta subunit external 1 domain PF575_01695 PF00562 RNA polymerase Rpb2, domain 6 PF575_01695 PF04560 RNA polymerase Rpb2, domain 7 PF575_01700 PF04983 RNA polymerase Rpb1, domain 3 PF575_01700 PF05000 RNA polymerase Rpb1, domain 4 PF575_01700 PF00623 RNA polymerase Rpb1, domain 2 PF575_01700 PF04997 RNA polymerase Rpb1, domain 1 PF575_01700 PF04998 RNA polymerase Rpb1, domain 5 PF575_01725 PF13726 Na+-H+ antiporter family PF575_01725 PF03553 Na+/H+ antiporter family PF575_01740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_01740 PF00183 Hsp90 protein PF575_01755 PF01323 DSBA-like thioredoxin domain PF575_01765 PF13411 MerR HTH family regulatory protein PF575_01785 PF00108 Thiolase, N-terminal domain PF575_01785 PF02803 Thiolase, C-terminal domain PF575_01790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF575_01790 PF00378 Enoyl-CoA hydratase/isomerase PF575_01790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF575_01805 PF01541 GIY-YIG catalytic domain PF575_01805 PF02151 UvrB/uvrC motif PF575_01805 PF08459 UvrC Helix-hairpin-helix N-terminal PF575_01815 PF01066 CDP-alcohol phosphatidyltransferase PF575_01820 PF12833 Helix-turn-helix domain PF575_01820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PF575_01820 PF02805 Metal binding domain of Ada PF575_01820 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PF575_01845 PF13533 Biotin-lipoyl like PF575_01850 PF03652 Holliday junction resolvase PF575_01855 PF02622 Uncharacterized ACR, COG1678 PF575_01860 PF02463 RecF/RecN/SMC N terminal domain PF575_01870 PF06865 Pyrimidine/purine nucleoside phosphorylase PF575_01875 PF00588 SpoU rRNA Methylase family PF575_01875 PF08032 RNA 2'-O ribose methyltransferase substrate binding PF575_01885 PF01121 Dephospho-CoA kinase PF575_01890 PF06750 Bacterial Peptidase A24 N-terminal domain PF575_01890 PF01478 Type IV leader peptidase family PF575_01895 PF00482 Type II secretion system (T2SS), protein F PF575_01900 PF00437 Type II/IV secretion system protein PF575_01900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PF575_01905 PF00121 Triosephosphate isomerase PF575_01910 PF03840 Preprotein translocase SecG subunit PF575_01930 PF02576 RimP N-terminal domain PF575_01930 PF17384 RimP C-terminal SH3 domain PF575_01935 PF08529 NusA N-terminal domain PF575_01935 PF00575 S1 RNA binding domain PF575_01935 PF13184 NusA-like KH domain PF575_01940 PF00009 Elongation factor Tu GTP binding domain PF575_01940 PF08364 Bacterial translation initiation factor IF-2 associated region PF575_01940 PF04760 Translation initiation factor IF-2, N-terminal region PF575_01940 PF11987 Translation-initiation factor 2 PF575_01945 PF02033 Ribosome-binding factor A PF575_01950 PF03334 Na+/H+ antiporter subunit PF575_01955 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) PF575_01960 PF01899 Na+/H+ ion antiporter subunit PF575_01965 PF00361 Proton-conducting membrane transporter PF575_01970 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PF575_01975 PF13244 Domain of unknown function (DUF4040) PF575_01975 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter PF575_01975 PF00361 Proton-conducting membrane transporter PF575_01975 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PF575_01990 PF01502 Phosphoribosyl-AMP cyclohydrolase PF575_01995 PF01494 FAD binding domain PF575_02000 PF03109 ABC1 family PF575_02010 PF01209 ubiE/COQ5 methyltransferase family PF575_02020 PF03976 Polyphosphate kinase 2 (PPK2) PF575_02030 PF17946 RecC C-terminal domain PF575_02035 PF00580 UvrD/REP helicase N-terminal domain PF575_02035 PF12705 PD-(D/E)XK nuclease superfamily PF575_02035 PF13361 UvrD-like helicase C-terminal domain PF575_02040 PF13538 UvrD-like helicase C-terminal domain PF575_02045 PF00144 Beta-lactamase PF575_02050 PF00312 Ribosomal protein S15 PF575_02055 PF00013 KH domain PF575_02055 PF00575 S1 RNA binding domain PF575_02055 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PF575_02055 PF01138 3' exoribonuclease family, domain 1 PF575_02055 PF03725 3' exoribonuclease family, domain 2 PF575_02060 PF01544 CorA-like Mg2+ transporter protein PF575_02070 PF00226 DnaJ domain PF575_02070 PF01556 DnaJ C terminal domain PF575_02080 PF01430 Hsp33 protein PF575_02085 PF02254 TrkA-N domain PF575_02085 PF00999 Sodium/hydrogen exchanger family PF575_02090 PF17764 3′ DNA-binding domain (3′BD) PF575_02090 PF18074 Primosomal protein N C-terminal domain PF575_02090 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PF575_02090 PF00271 Helicase conserved C-terminal domain PF575_02090 PF00270 DEAD/DEAH box helicase PF575_02095 PF00482 Type II secretion system (T2SS), protein F PF575_02100 PF07963 Prokaryotic N-terminal methylation motif PF575_02100 PF08334 Type II secretion system (T2SS), protein G PF575_02110 PF01588 Putative tRNA binding domain PF575_02115 PF00795 Carbon-nitrogen hydrolase PF575_02120 PF00571 CBS domain PF575_02120 PF03471 Transporter associated domain PF575_02125 PF01206 Sulfurtransferase TusA PF575_02145 PF01177 Asp/Glu/Hydantoin racemase PF575_02155 PF00762 Ferrochelatase PF575_02160 PF00753 Metallo-beta-lactamase superfamily PF575_02165 PF03884 DNA gyrase inhibitor YacG PF575_02175 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_02175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PF575_02175 PF13247 4Fe-4S dicluster domain PF575_02185 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PF575_02210 PF13005 zinc-finger binding domain of transposase IS66 PF575_02210 PF13007 Transposase C of IS166 homeodomain PF575_02210 PF13817 IS66 C-terminal element PF575_02210 PF03050 Transposase IS66 family PF575_02220 PF13005 zinc-finger binding domain of transposase IS66 PF575_02220 PF13007 Transposase C of IS166 homeodomain PF575_02220 PF13817 IS66 C-terminal element PF575_02220 PF03050 Transposase IS66 family PF575_02240 PF03109 ABC1 family PF575_02245 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF575_02245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_02250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_02250 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF575_02250 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_02255 PF01554 MatE PF575_02265 PF04055 Radical SAM superfamily PF575_02265 PF06969 HemN C-terminal domain PF575_02275 PF03466 LysR substrate binding domain PF575_02275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_02290 PF00501 AMP-binding enzyme PF575_02290 PF13193 AMP-binding enzyme C-terminal domain PF575_02295 PF12111 Polyribonucleotide phosphorylase C terminal PF575_02295 PF00575 S1 RNA binding domain PF575_02295 PF10150 Ribonuclease E/G family PF575_02300 PF01479 S4 domain PF575_02300 PF00849 RNA pseudouridylate synthase PF575_02305 PF13419 Haloacid dehalogenase-like hydrolase PF575_02310 PF08279 HTH domain PF575_02310 PF13280 WYL domain PF575_02315 PF02798 Glutathione S-transferase, N-terminal domain PF575_02325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_02325 PF03466 LysR substrate binding domain PF575_02330 PF12706 Beta-lactamase superfamily domain PF575_02335 PF00141 Peroxidase PF575_02340 PF02896 PEP-utilising enzyme, TIM barrel domain PF575_02340 PF01590 GAF domain PF575_02340 PF00391 PEP-utilising enzyme, mobile domain PF575_02340 PF05524 PEP-utilising enzyme, N-terminal PF575_02345 PF00293 NUDIX domain PF575_02365 PF03466 LysR substrate binding domain PF575_02365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_02375 PF00330 Aconitase family (aconitate hydratase) PF575_02380 PF00694 Aconitase C-terminal domain PF575_02390 PF00180 Isocitrate/isopropylmalate dehydrogenase PF575_02405 PF01176 Translation initiation factor 1A / IF-1 PF575_02415 PF01416 tRNA pseudouridine synthase PF575_02435 PF02774 Semialdehyde dehydrogenase, dimerisation domain PF575_02435 PF01118 Semialdehyde dehydrogenase, NAD binding domain PF575_02445 PF00375 Sodium:dicarboxylate symporter family PF575_02455 PF03279 Bacterial lipid A biosynthesis acyltransferase PF575_02460 PF01810 LysE type translocator PF575_02465 PF00005 ABC transporter PF575_02465 PF12848 ABC transporter PF575_02465 PF16326 ABC transporter C-terminal domain PF575_02470 PF04102 SlyX PF575_02475 PF00107 Zinc-binding dehydrogenase PF575_02475 PF08240 Alcohol dehydrogenase GroES-like domain PF575_02480 PF01638 HxlR-like helix-turn-helix PF575_02490 PF01751 Toprim domain PF575_02490 PF01396 Topoisomerase DNA binding C4 zinc finger PF575_02490 PF08272 Topoisomerase I zinc-ribbon-like PF575_02490 PF01131 DNA topoisomerase PF575_02505 PF00580 UvrD/REP helicase N-terminal domain PF575_02505 PF13361 UvrD-like helicase C-terminal domain PF575_02510 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF575_02530 PF00999 Sodium/hydrogen exchanger family PF575_02530 PF02254 TrkA-N domain PF575_02535 PF00471 Ribosomal protein L33 PF575_02540 PF00830 Ribosomal L28 family PF575_02545 PF00171 Aldehyde dehydrogenase family PF575_02555 PF01842 ACT domain PF575_02555 PF00551 Formyl transferase PF575_02565 PF01618 MotA/TolQ/ExbB proton channel family PF575_02575 PF01625 Peptide methionine sulfoxide reductase PF575_02585 PF00186 Dihydrofolate reductase PF575_02590 PF00303 Thymidylate synthase PF575_02605 PF01790 Prolipoprotein diacylglyceryl transferase PF575_02625 PF00902 Sec-independent protein translocase protein (TatC) PF575_02630 PF02416 mttA/Hcf106 family PF575_02635 PF02416 mttA/Hcf106 family PF575_02645 PF01725 Ham1 family PF575_02655 PF00561 alpha/beta hydrolase fold PF575_02655 PF07021 Methionine biosynthesis protein MetW PF575_02660 PF00561 alpha/beta hydrolase fold PF575_02665 PF08502 LeuA allosteric (dimerisation) domain PF575_02665 PF00682 HMGL-like PF575_02670 PF13640 2OG-Fe(II) oxygenase superfamily PF575_02670 PF18331 PKHD-type hydroxylase C-terminal domain PF575_02675 PF07715 TonB-dependent Receptor Plug Domain PF575_02675 PF00593 TonB dependent receptor PF575_02680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF575_02680 PF05698 Bacterial trigger factor protein (TF) C-terminus PF575_02680 PF05697 Bacterial trigger factor protein (TF) PF575_02685 PF00574 Clp protease PF575_02690 PF06689 ClpX C4-type zinc finger PF575_02690 PF10431 C-terminal, D2-small domain, of ClpB protein PF575_02690 PF07724 AAA domain (Cdc48 subfamily) PF575_02705 PF05681 Fumarate hydratase (Fumerase) PF575_02705 PF05683 Fumarase C-terminus PF575_02710 PF07085 DRTGG domain PF575_02710 PF01515 Phosphate acetyl/butaryl transferase PF575_02715 PF00871 Acetokinase family PF575_02720 PF00920 Dehydratase family PF575_02725 PF01081 KDPG and KHG aldolase PF575_02730 PF02447 GntP family permease PF575_02735 PF01202 Shikimate kinase PF575_02740 PF00171 Aldehyde dehydrogenase family PF575_02745 PF00171 Aldehyde dehydrogenase family PF575_02750 PF00561 alpha/beta hydrolase fold PF575_02760 PF00933 Glycosyl hydrolase family 3 N terminal domain PF575_02765 PF11818 C-terminal domain of tail specific protease (DUF3340) PF575_02765 PF00595 PDZ domain PF575_02765 PF03572 Peptidase family S41 PF575_02765 PF17804 Tail specific protease N-terminal domain PF575_02770 PF13439 Glycosyltransferase Family 4 PF575_02770 PF00534 Glycosyl transferases group 1 PF575_02775 PF01569 PAP2 superfamily PF575_02780 PF04384 Iron-sulphur cluster assembly PF575_02785 PF00334 Nucleoside diphosphate kinase PF575_02790 PF04055 Radical SAM superfamily PF575_02800 PF13464 Domain of unknown function (DUF4115) PF575_02805 PF04551 GcpE protein PF575_02810 PF13393 Histidyl-tRNA synthetase PF575_02810 PF03129 Anticodon binding domain PF575_02820 PF13360 PQQ-like domain PF575_02825 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PF575_02825 PF01926 50S ribosome-binding GTPase PF575_02835 PF02556 Preprotein translocase subunit SecB PF575_02840 PF00462 Glutaredoxin PF575_02850 PF03193 RsgA GTPase PF575_02855 PF00929 Exonuclease PF575_02870 PF02321 Outer membrane efflux protein PF575_02875 PF00005 ABC transporter PF575_02875 PF02687 FtsX-like permease family PF575_02875 PF12704 MacB-like periplasmic core domain PF575_02880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF575_02895 PF08264 Anticodon-binding domain of tRNA PF575_02895 PF00133 tRNA synthetases class I (I, L, M and V) PF575_02895 PF13603 Leucyl-tRNA synthetase, Domain 2 PF575_02895 PF09334 tRNA synthetases class I (M) PF575_02905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PF575_02905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PF575_02905 PF00205 Thiamine pyrophosphate enzyme, central domain PF575_02910 PF10369 Small subunit of acetolactate synthase PF575_02915 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PF575_02915 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PF575_02940 PF00009 Elongation factor Tu GTP binding domain PF575_02940 PF16658 Class II release factor RF3, C-terminal domain PF575_02940 PF03144 Elongation factor Tu domain 2 PF575_02955 PF01026 TatD related DNase PF575_02960 PF00330 Aconitase family (aconitate hydratase) PF575_02960 PF00694 Aconitase C-terminal domain PF575_02965 PF00899 ThiF family PF575_02975 PF03466 LysR substrate binding domain PF575_02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_02985 PF01207 Dihydrouridine synthase (Dus) PF575_02990 PF07690 Major Facilitator Superfamily PF575_03000 PF00892 EamA-like transporter family PF575_03005 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PF575_03005 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PF575_03010 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PF575_03015 PF02233 NAD(P) transhydrogenase beta subunit PF575_03020 PF00106 short chain dehydrogenase PF575_03030 PF01261 Xylose isomerase-like TIM barrel PF575_03035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PF575_03035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PF575_03040 PF00378 Enoyl-CoA hydratase/isomerase PF575_03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_03045 PF00512 His Kinase A (phospho-acceptor) domain PF575_03045 PF01627 Hpt domain PF575_03045 PF00072 Response regulator receiver domain PF575_03045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PF575_03045 PF00672 HAMP domain PF575_03050 PF00291 Pyridoxal-phosphate dependent enzyme PF575_03060 PF05958 tRNA (Uracil-5-)-methyltransferase PF575_03065 PF13291 ACT domain PF575_03065 PF04607 Region found in RelA / SpoT proteins PF575_03065 PF02824 TGS domain PF575_03075 PF03819 MazG nucleotide pyrophosphohydrolase domain PF575_03085 PF12627 Probable RNA and SrmB- binding site of polymerase A PF575_03085 PF12626 Polymerase A arginine-rich C-terminus PF575_03085 PF01743 Poly A polymerase head domain PF575_03090 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PF575_03095 PF02548 Ketopantoate hydroxymethyltransferase PF575_03100 PF02569 Pantoate-beta-alanine ligase PF575_03105 PF03668 P-loop ATPase protein family PF575_03110 PF00381 PTS HPr component phosphorylation site PF575_03115 PF04751 Protein of unknown function (DUF615) PF575_03120 PF00501 AMP-binding enzyme PF575_03120 PF13193 AMP-binding enzyme C-terminal domain PF575_03125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PF575_03125 PF03129 Anticodon binding domain PF575_03125 PF02824 TGS domain PF575_03125 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PF575_03130 PF00707 Translation initiation factor IF-3, C-terminal domain PF575_03130 PF05198 Translation initiation factor IF-3, N-terminal domain PF575_03135 PF00043 Glutathione S-transferase, C-terminal domain PF575_03135 PF02798 Glutathione S-transferase, N-terminal domain PF575_03140 PF09335 SNARE associated Golgi protein PF575_03145 PF07690 Major Facilitator Superfamily PF575_03155 PF01632 Ribosomal protein L35 PF575_03160 PF00453 Ribosomal protein L20 PF575_03180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PF575_03180 PF01409 tRNA synthetases class II core domain (F) PF575_03185 PF03483 B3/4 domain PF575_03185 PF03484 tRNA synthetase B5 domain PF575_03185 PF03147 Ferredoxin-fold anticodon binding domain PF575_03185 PF01588 Putative tRNA binding domain PF575_03185 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PF575_03190 PF00216 Bacterial DNA-binding protein PF575_03205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PF575_03205 PF07498 Rho termination factor, N-terminal domain PF575_03205 PF07497 Rho termination factor, RNA-binding domain PF575_03210 PF00085 Thioredoxin PF575_03215 PF02541 Ppx/GppA phosphatase family PF575_03220 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PF575_03225 PF01171 PP-loop family PF575_03225 PF09179 TilS substrate binding domain PF575_03225 PF11734 TilS substrate C-terminal domain PF575_03230 PF14748 Pyrroline-5-carboxylate reductase dimerisation PF575_03230 PF03807 NADP oxidoreductase coenzyme F420-dependent PF575_03235 PF02325 YGGT family PF575_03240 PF01367 5'-3' exonuclease, C-terminal SAM fold PF575_03240 PF00476 DNA polymerase family A PF575_03240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PF575_03240 PF01612 3'-5' exonuclease PF575_03260 PF00437 Type II/IV secretion system protein PF575_03265 PF02566 OsmC-like protein PF575_03270 PF01047 MarR family PF575_03280 PF00795 Carbon-nitrogen hydrolase PF575_03325 PF00309 Sigma-54 factor, Activator interacting domain (AID) PF575_03325 PF04963 Sigma-54 factor, core binding domain PF575_03325 PF04552 Sigma-54, DNA binding domain PF575_03330 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PF575_03335 PF01722 BolA-like protein PF575_03340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PF575_03345 PF01634 ATP phosphoribosyltransferase PF575_03350 PF00815 Histidinol dehydrogenase PF575_03355 PF00155 Aminotransferase class I and II PF575_03360 PF04715 Anthranilate synthase component I, N terminal region PF575_03360 PF00425 chorismate binding enzyme PF575_03400 PF13007 Transposase C of IS166 homeodomain PF575_03400 PF13005 zinc-finger binding domain of transposase IS66 PF575_03400 PF13817 IS66 C-terminal element PF575_03400 PF03050 Transposase IS66 family PF575_03420 PF00293 NUDIX domain PF575_03425 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_03430 PF00814 Glycoprotease family PF575_03435 PF04445 Putative SAM-dependent methyltransferase PF575_03445 PF00756 Putative esterase PF575_03455 PF00834 Ribulose-phosphate 3 epimerase family PF575_03470 PF00394 Multicopper oxidase PF575_03470 PF07731 Multicopper oxidase PF575_03470 PF07732 Multicopper oxidase PF575_03485 PF00893 Small Multidrug Resistance protein PF575_03490 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PF575_03490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PF575_03495 PF01960 ArgJ family PF575_03500 PF02445 Quinolinate synthetase A protein PF575_03525 PF00962 Adenosine/AMP deaminase PF575_03530 PF08240 Alcohol dehydrogenase GroES-like domain PF575_03530 PF00107 Zinc-binding dehydrogenase PF575_03535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_03535 PF03466 LysR substrate binding domain PF575_03540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_03540 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_03540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_03545 PF07690 Major Facilitator Superfamily PF575_03550 PF02515 CoA-transferase family III PF575_03555 PF17932 Tetracyclin repressor-like, C-terminal domain PF575_03555 PF00440 Bacterial regulatory proteins, tetR family PF575_03570 PF14537 Cytochrome c3 PF575_03570 PF00890 FAD binding domain PF575_03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_03575 PF03466 LysR substrate binding domain PF575_03585 PF07690 Major Facilitator Superfamily PF575_03590 PF03466 LysR substrate binding domain PF575_03590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_03595 PF01810 LysE type translocator PF575_03600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_03600 PF03466 LysR substrate binding domain PF575_03610 PF08267 Cobalamin-independent synthase, N-terminal domain PF575_03610 PF01717 Cobalamin-independent synthase, Catalytic domain PF575_03615 PF01613 Flavin reductase like domain PF575_03650 PF17074 Darcynin, domain of unknown function PF575_03665 PF00268 Ribonucleotide reductase, small chain PF575_03675 PF00317 Ribonucleotide reductase, all-alpha domain PF575_03675 PF03477 ATP cone domain PF575_03675 PF02867 Ribonucleotide reductase, barrel domain PF575_03685 PF00072 Response regulator receiver domain PF575_03685 PF00486 Transcriptional regulatory protein, C terminal PF575_03690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_03690 PF00512 His Kinase A (phospho-acceptor) domain PF575_03690 PF00672 HAMP domain PF575_03700 PF00990 Diguanylate cyclase, GGDEF domain PF575_03700 PF17158 Membrane-associated sensor, integral membrane domain PF575_03705 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PF575_03710 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PF575_03715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PF575_03715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PF575_03725 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PF575_03725 PF10531 SLBB domain PF575_03725 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PF575_03730 PF00384 Molybdopterin oxidoreductase PF575_03730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PF575_03730 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PF575_03735 PF00146 NADH dehydrogenase PF575_03740 PF12838 4Fe-4S dicluster domain PF575_03745 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PF575_03750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PF575_03755 PF00361 Proton-conducting membrane transporter PF575_03755 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PF575_03760 PF00361 Proton-conducting membrane transporter PF575_03765 PF00361 Proton-conducting membrane transporter PF575_03775 PF00313 'Cold-shock' DNA-binding domain PF575_03785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_03785 PF03466 LysR substrate binding domain PF575_03790 PF00970 Oxidoreductase FAD-binding domain PF575_03790 PF00175 Oxidoreductase NAD-binding domain PF575_03805 PF05552 Conserved TM helix PF575_03820 PF00291 Pyridoxal-phosphate dependent enzyme PF575_03825 PF13533 Biotin-lipoyl like PF575_03850 PF01588 Putative tRNA binding domain PF575_03850 PF09334 tRNA synthetases class I (M) PF575_03860 PF10609 NUBPL iron-transfer P-loop NTPase PF575_03865 PF01048 Phosphorylase superfamily PF575_03880 PF00692 dUTPase PF575_03910 PF01207 Dihydrouridine synthase (Dus) PF575_03920 PF00448 SRP54-type protein, GTPase domain PF575_03920 PF02881 SRP54-type protein, helical bundle domain PF575_03920 PF02978 Signal peptide binding domain PF575_03925 PF03309 Type III pantothenate kinase PF575_03935 PF01925 Sulfite exporter TauE/SafE PF575_03945 PF02463 RecF/RecN/SMC N terminal domain PF575_03945 PF06470 SMC proteins Flexible Hinge Domain PF575_03955 PF00533 BRCA1 C Terminus (BRCT) domain PF575_03955 PF01653 NAD-dependent DNA ligase adenylation domain PF575_03955 PF03120 NAD-dependent DNA ligase OB-fold domain PF575_03955 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PF575_03955 PF12826 Helix-hairpin-helix motif PF575_03960 PF00210 Ferritin-like domain PF575_03965 PF07690 Major Facilitator Superfamily PF575_03970 PF00982 Glycosyltransferase family 20 PF575_03975 PF02358 Trehalose-phosphatase PF575_03980 PF08241 Methyltransferase domain PF575_03980 PF12697 Alpha/beta hydrolase family PF575_03985 PF00202 Aminotransferase class-III PF575_03985 PF06968 Biotin and Thiamin Synthesis associated domain PF575_03985 PF04055 Radical SAM superfamily PF575_03990 PF00155 Aminotransferase class I and II PF575_04005 PF00849 RNA pseudouridylate synthase PF575_04005 PF01479 S4 domain PF575_04010 PF04079 Segregation and condensation complex subunit ScpB PF575_04015 PF02616 Segregation and condensation protein ScpA PF575_04020 PF01300 Telomere recombination PF575_04025 PF04315 Elongation factor P hydroxylase PF575_04030 PF02620 Large ribosomal RNA subunit accumulation protein YceD PF575_04035 PF01783 Ribosomal L32p protein family PF575_04040 PF00698 Acyl transferase domain PF575_04050 PF00550 Phosphopantetheine attachment site PF575_04055 PF04972 BON domain PF575_04055 PF01476 LysM domain PF575_04060 PF08543 Phosphomethylpyrimidine kinase PF575_04060 PF03070 TENA/THI-4/PQQC family PF575_04060 PF02581 Thiamine monophosphate synthase PF575_04070 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PF575_04085 PF02261 Aspartate decarboxylase PF575_04090 PF01195 Peptidyl-tRNA hydrolase PF575_04095 PF01386 Ribosomal L25p family PF575_04100 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PF575_04100 PF14572 Phosphoribosyl synthetase-associated domain PF575_04125 PF08544 GHMP kinases C terminal PF575_04125 PF00288 GHMP kinases N terminal domain PF575_04130 PF03550 Outer membrane lipoprotein LolB PF575_04140 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PF575_04140 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PF575_04140 PF01488 Shikimate / quinate 5-dehydrogenase PF575_04145 PF01807 CHC2 zinc finger PF575_04145 PF08278 DNA primase DnaG DnaB-binding PF575_04145 PF10410 DnaB-helicase binding domain of primase PF575_04145 PF08275 DNA primase catalytic core, N-terminal domain PF575_04150 PF13525 Outer membrane lipoprotein PF575_04155 PF01479 S4 domain PF575_04155 PF00849 RNA pseudouridylate synthase PF575_04160 PF02578 Multi-copper polyphenol oxidoreductase laccase PF575_04165 PF03358 NADPH-dependent FMN reductase PF575_04170 PF01668 SmpB protein PF575_04175 PF01467 Cytidylyltransferase-like PF575_04180 PF00037 4Fe-4S binding domain PF575_04200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_04200 PF03466 LysR substrate binding domain PF575_04205 PF00180 Isocitrate/isopropylmalate dehydrogenase PF575_04210 PF02028 BCCT, betaine/carnitine/choline family transporter PF575_04215 PF07859 alpha/beta hydrolase fold PF575_04220 PF00355 Rieske [2Fe-2S] domain PF575_04220 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF575_04225 PF00171 Aldehyde dehydrogenase family PF575_04230 PF00970 Oxidoreductase FAD-binding domain PF575_04230 PF00111 2Fe-2S iron-sulfur cluster binding domain PF575_04230 PF00175 Oxidoreductase NAD-binding domain PF575_04245 PF00795 Carbon-nitrogen hydrolase PF575_04245 PF02540 NAD synthase PF575_04255 PF02678 Pirin PF575_04255 PF05726 Pirin C-terminal cupin domain PF575_04260 PF03653 Uncharacterised protein family (UPF0093) PF575_04265 PF00109 Beta-ketoacyl synthase, N-terminal domain PF575_04265 PF02801 Beta-ketoacyl synthase, C-terminal domain PF575_04275 PF00164 Ribosomal protein S12/S23 PF575_04280 PF00177 Ribosomal protein S7p/S5e PF575_04285 PF03144 Elongation factor Tu domain 2 PF575_04285 PF00009 Elongation factor Tu GTP binding domain PF575_04285 PF14492 Elongation Factor G, domain II PF575_04285 PF00679 Elongation factor G C-terminus PF575_04285 PF03764 Elongation factor G, domain IV PF575_04290 PF03143 Elongation factor Tu C-terminal domain PF575_04290 PF03144 Elongation factor Tu domain 2 PF575_04290 PF00009 Elongation factor Tu GTP binding domain PF575_04305 PF00583 Acetyltransferase (GNAT) family PF575_04310 PF04377 Arginine-tRNA-protein transferase, C terminus PF575_04310 PF04376 Arginine-tRNA-protein transferase, N terminus PF575_04315 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PF575_04320 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_04325 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PF575_04325 PF01580 FtsK/SpoIIIE family PF575_04325 PF09397 Ftsk gamma domain PF575_04325 PF17854 FtsK alpha domain PF575_04330 PF01810 LysE type translocator PF575_04340 PF03776 Septum formation topological specificity factor MinE PF575_04345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PF575_04350 PF03775 Septum formation inhibitor MinC, C-terminal domain PF575_04360 PF01553 Acyltransferase PF575_04365 PF13488 Glycine zipper PF575_04365 PF00691 OmpA family PF575_04370 PF13361 UvrD-like helicase C-terminal domain PF575_04370 PF00580 UvrD/REP helicase N-terminal domain PF575_04375 PF00692 dUTPase PF575_04380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF575_04380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF575_04380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF575_04380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PF575_04385 PF00696 Amino acid kinase family PF575_04395 PF13230 Glutamine amidotransferases class-II PF575_04400 PF01814 Hemerythrin HHE cation binding domain PF575_04410 PF03658 RnfH family Ubiquitin PF575_04415 PF04355 SmpA / OmlA family PF575_04420 PF01475 Ferric uptake regulator family PF575_04425 PF00437 Type II/IV secretion system protein PF575_04430 PF00437 Type II/IV secretion system protein PF575_04435 PF01168 Alanine racemase, N-terminal domain PF575_04445 PF00149 Calcineurin-like phosphoesterase PF575_04445 PF12320 Type 5 capsule protein repressor C-terminal domain PF575_04465 PF01370 NAD dependent epimerase/dehydratase family PF575_04465 PF08338 Domain of unknown function (DUF1731) PF575_04470 PF01266 FAD dependent oxidoreductase PF575_04475 PF00490 Delta-aminolevulinic acid dehydratase PF575_04480 PF03061 Thioesterase superfamily PF575_04485 PF13533 Biotin-lipoyl like PF575_04490 PF07690 Major Facilitator Superfamily PF575_04505 PF00589 Phage integrase family PF575_04505 PF13356 Arm DNA-binding domain PF575_04550 PF00436 Single-strand binding protein family PF575_04590 PF13005 zinc-finger binding domain of transposase IS66 PF575_04590 PF13817 IS66 C-terminal element PF575_04590 PF13007 Transposase C of IS166 homeodomain PF575_04590 PF03050 Transposase IS66 family PF575_04605 PF02384 N-6 DNA Methylase PF575_04620 PF11867 Domain of unknown function (DUF3387) PF575_04620 PF18766 SWI2/SNF2 ATPase PF575_04620 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PF575_04630 PF13005 zinc-finger binding domain of transposase IS66 PF575_04630 PF13007 Transposase C of IS166 homeodomain PF575_04630 PF13817 IS66 C-terminal element PF575_04630 PF03050 Transposase IS66 family PF575_04655 PF13817 IS66 C-terminal element PF575_04655 PF13005 zinc-finger binding domain of transposase IS66 PF575_04655 PF13007 Transposase C of IS166 homeodomain PF575_04655 PF03050 Transposase IS66 family PF575_04660 PF02384 N-6 DNA Methylase PF575_04660 PF12161 HsdM N-terminal domain PF575_04690 PF00083 Sugar (and other) transporter PF575_04750 PF13520 Amino acid permease PF575_04755 PF02574 Homocysteine S-methyltransferase PF575_04765 PF06039 Malate:quinone oxidoreductase (Mqo) PF575_04780 PF13007 Transposase C of IS166 homeodomain PF575_04780 PF13005 zinc-finger binding domain of transposase IS66 PF575_04780 PF13817 IS66 C-terminal element PF575_04780 PF03050 Transposase IS66 family PF575_04785 PF00732 GMC oxidoreductase PF575_04785 PF05199 GMC oxidoreductase PF575_04790 PF00171 Aldehyde dehydrogenase family PF575_04795 PF00440 Bacterial regulatory proteins, tetR family PF575_04795 PF13977 BetI-type transcriptional repressor, C-terminal PF575_04800 PF02028 BCCT, betaine/carnitine/choline family transporter PF575_04805 PF02028 BCCT, betaine/carnitine/choline family transporter PF575_04815 PF03061 Thioesterase superfamily PF575_04825 PF07683 Cobalamin synthesis protein cobW C-terminal domain PF575_04825 PF02492 CobW/HypB/UreG, nucleotide-binding domain PF575_04830 PF00375 Sodium:dicarboxylate symporter family PF575_04835 PF07152 YaeQ protein PF575_04840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF575_04845 PF01522 Polysaccharide deacetylase PF575_04845 PF14883 Hypothetical glycosyl hydrolase family 13 PF575_04850 PF00535 Glycosyl transferase family 2 PF575_04860 PF00378 Enoyl-CoA hydratase/isomerase PF575_04875 PF09339 IclR helix-turn-helix domain PF575_04875 PF01614 Bacterial transcriptional regulator PF575_04880 PF00355 Rieske [2Fe-2S] domain PF575_04890 PF00355 Rieske [2Fe-2S] domain PF575_04900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF575_04905 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_04905 PF14759 Reductase C-terminal PF575_04910 PF07690 Major Facilitator Superfamily PF575_04920 PF12697 Alpha/beta hydrolase family PF575_04930 PF01958 Domain of unknown function DUF108 PF575_04930 PF03447 Homoserine dehydrogenase, NAD binding domain PF575_04935 PF00171 Aldehyde dehydrogenase family PF575_04940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PF575_04940 PF00205 Thiamine pyrophosphate enzyme, central domain PF575_04940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PF575_04950 PF07690 Major Facilitator Superfamily PF575_04955 PF01327 Polypeptide deformylase PF575_04960 PF04960 Glutaminase PF575_04965 PF02311 AraC-like ligand binding domain PF575_04965 PF12833 Helix-turn-helix domain PF575_04970 PF07690 Major Facilitator Superfamily PF575_04975 PF01263 Aldose 1-epimerase PF575_04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_04985 PF03466 LysR substrate binding domain PF575_04995 PF07690 Major Facilitator Superfamily PF575_05000 PF00456 Transketolase, thiamine diphosphate binding domain PF575_05005 PF02779 Transketolase, pyrimidine binding domain PF575_05005 PF02780 Transketolase, C-terminal domain PF575_05010 PF02574 Homocysteine S-methyltransferase PF575_05010 PF00809 Pterin binding enzyme PF575_05010 PF02965 Vitamin B12 dependent methionine synthase, activation domain PF575_05010 PF02310 B12 binding domain PF575_05010 PF02607 B12 binding domain PF575_05015 PF01384 Phosphate transporter family PF575_05020 PF00291 Pyridoxal-phosphate dependent enzyme PF575_05035 PF03781 Sulfatase-modifying factor enzyme 1 PF575_05040 PF00884 Sulfatase PF575_05050 PF01106 NifU-like domain PF575_05050 PF01521 Iron-sulphur cluster biosynthesis PF575_05060 PF00593 TonB dependent receptor PF575_05060 PF07715 TonB-dependent Receptor Plug Domain PF575_05070 PF00561 alpha/beta hydrolase fold PF575_05075 PF00484 Carbonic anhydrase PF575_05080 PF13472 GDSL-like Lipase/Acylhydrolase family PF575_05085 PF00005 ABC transporter PF575_05095 PF01694 Rhomboid family PF575_05100 PF00912 Transglycosylase PF575_05105 PF13089 Polyphosphate kinase N-terminal domain PF575_05105 PF17941 Polyphosphate kinase C-terminal domain 1 PF575_05105 PF02503 Polyphosphate kinase middle domain PF575_05105 PF13090 Polyphosphate kinase C-terminal domain 2 PF575_05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_05120 PF03466 LysR substrate binding domain PF575_05125 PF00561 alpha/beta hydrolase fold PF575_05130 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_05130 PF18113 Rubredoxin binding C-terminal domain PF575_05135 PF00301 Rubredoxin PF575_05150 PF01336 OB-fold nucleic acid binding domain PF575_05150 PF00152 tRNA synthetases class II (D, K and N) PF575_05155 PF14052 Capsule assembly protein Wzi PF575_05165 PF01507 Phosphoadenosine phosphosulfate reductase family PF575_05170 PF00009 Elongation factor Tu GTP binding domain PF575_05185 PF03600 Citrate transporter PF575_05190 PF00571 CBS domain PF575_05190 PF03471 Transporter associated domain PF575_05190 PF01595 Cyclin M transmembrane N-terminal domain PF575_05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_05195 PF03466 LysR substrate binding domain PF575_05200 PF00463 Isocitrate lyase family PF575_05215 PF01774 UreD urease accessory protein PF575_05220 PF00547 Urease, gamma subunit PF575_05225 PF00699 Urease beta subunit PF575_05230 PF00449 Urease alpha-subunit, N-terminal domain PF575_05230 PF01979 Amidohydrolase family PF575_05235 PF02814 UreE urease accessory protein, N-terminal domain PF575_05235 PF05194 UreE urease accessory protein, C-terminal domain PF575_05240 PF01730 UreF PF575_05245 PF02492 CobW/HypB/UreG, nucleotide-binding domain PF575_05260 PF00905 Penicillin binding protein transpeptidase domain PF575_05260 PF03717 Penicillin-binding Protein dimerisation domain PF575_05275 PF05191 Adenylate kinase, active site lid PF575_05285 PF00633 Helix-hairpin-helix motif PF575_05285 PF10576 Iron-sulfur binding domain of endonuclease III PF575_05285 PF00730 HhH-GPD superfamily base excision DNA repair protein PF575_05290 PF04060 Putative Fe-S cluster PF575_05295 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PF575_05295 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PF575_05305 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PF575_05310 PF02590 Predicted SPOUT methyltransferase PF575_05315 PF00004 ATPase family associated with various cellular activities (AAA) PF575_05315 PF05362 Lon protease (S16) C-terminal proteolytic domain PF575_05315 PF02190 ATP-dependent protease La (LON) substrate-binding domain PF575_05320 PF05662 Coiled stalk of trimeric autotransporter adhesin PF575_05320 PF05658 Head domain of trimeric autotransporter adhesin PF575_05320 PF03895 YadA-like membrane anchor domain PF575_05320 PF13018 Extended Signal Peptide of Type V secretion system PF575_05325 PF00691 OmpA family PF575_05325 PF04355 SmpA / OmlA family PF575_05330 PF01812 5-formyltetrahydrofolate cyclo-ligase family PF575_05640 PF03050 Transposase IS66 family PF575_05640 PF13817 IS66 C-terminal element PF575_05640 PF13007 Transposase C of IS166 homeodomain PF575_05640 PF13005 zinc-finger binding domain of transposase IS66 PF575_05655 PF03869 Arc-like DNA binding domain PF575_05720 PF13356 Arm DNA-binding domain PF575_05720 PF00589 Phage integrase family PF575_05730 PF00854 POT family PF575_05735 PF00120 Glutamine synthetase, catalytic domain PF575_05735 PF03951 Glutamine synthetase, beta-Grasp domain PF575_05740 PF04345 Chorismate lyase PF575_05745 PF01040 UbiA prenyltransferase family PF575_05780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PF575_05780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PF575_05785 PF01784 NIF3 (NGG1p interacting factor 3) PF575_05790 PF13180 PDZ domain PF575_05795 PF01743 Poly A polymerase head domain PF575_05795 PF12627 Probable RNA and SrmB- binding site of polymerase A PF575_05800 PF01515 Phosphate acetyl/butaryl transferase PF575_05800 PF03949 Malic enzyme, NAD binding domain PF575_05800 PF00390 Malic enzyme, N-terminal domain PF575_05805 PF03707 Bacterial signalling protein N terminal repeat PF575_05805 PF00563 EAL domain PF575_05805 PF00990 Diguanylate cyclase, GGDEF domain PF575_05810 PF04452 RNA methyltransferase PF575_05815 PF02219 Methylenetetrahydrofolate reductase PF575_05820 PF05221 S-adenosyl-L-homocysteine hydrolase PF575_05820 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PF575_05835 PF09317 Domain of unknown function (DUF1974) PF575_05835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_05835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_05840 PF04055 Radical SAM superfamily PF575_05845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF575_05845 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_05855 PF07690 Major Facilitator Superfamily PF575_05865 PF00557 Metallopeptidase family M24 PF575_05870 PF00318 Ribosomal protein S2 PF575_05875 PF00889 Elongation factor TS PF575_05885 PF12833 Helix-turn-helix domain PF575_05905 PF05036 Sporulation related domain PF575_05905 PF03330 Lytic transglycolase PF575_05910 PF13406 Transglycosylase SLT domain PF575_05915 PF01098 Cell cycle protein PF575_05925 PF14489 QueF-like protein PF575_05925 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PF575_05930 PF01061 ABC-2 type transporter PF575_05935 PF00005 ABC transporter PF575_05965 PF00464 Serine hydroxymethyltransferase PF575_05970 PF02321 Outer membrane efflux protein PF575_05975 PF00873 AcrB/AcrD/AcrF family PF575_05980 PF13533 Biotin-lipoyl like PF575_05985 PF03466 LysR substrate binding domain PF575_05985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_05990 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF575_05995 PF00528 Binding-protein-dependent transport system inner membrane component PF575_06000 PF00528 Binding-protein-dependent transport system inner membrane component PF575_06005 PF00005 ABC transporter PF575_06010 PF00893 Small Multidrug Resistance protein PF575_06015 PF00037 4Fe-4S binding domain PF575_06020 PF01136 Peptidase family U32 PF575_06020 PF16325 Peptidase family U32 C-terminal domain PF575_06025 PF00392 Bacterial regulatory proteins, gntR family PF575_06025 PF00155 Aminotransferase class I and II PF575_06030 PF02567 Phenazine biosynthesis-like protein PF575_06035 PF00970 Oxidoreductase FAD-binding domain PF575_06035 PF00175 Oxidoreductase NAD-binding domain PF575_06040 PF18389 TrmO C-terminal domain PF575_06040 PF01980 tRNA-methyltransferase O PF575_06070 PF00072 Response regulator receiver domain PF575_06070 PF00486 Transcriptional regulatory protein, C terminal PF575_06075 PF00512 His Kinase A (phospho-acceptor) domain PF575_06075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_06075 PF08521 Two-component sensor kinase N-terminal PF575_06085 PF00293 NUDIX domain PF575_06095 PF00912 Transglycosylase PF575_06095 PF00905 Penicillin binding protein transpeptidase domain PF575_06095 PF14814 Bifunctional transglycosylase second domain PF575_06100 PF01513 ATP-NAD kinase PF575_06105 PF07023 Protein of unknown function (DUF1315) PF575_06110 PF00591 Glycosyl transferase family, a/b domain PF575_06110 PF02885 Glycosyl transferase family, helical bundle domain PF575_06115 PF00375 Sodium:dicarboxylate symporter family PF575_06120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_06120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_06120 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_06125 PF00756 Putative esterase PF575_06130 PF01842 ACT domain PF575_06130 PF00800 Prephenate dehydratase PF575_06130 PF01817 Chorismate mutase type II PF575_06135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PF575_06145 PF01546 Peptidase family M20/M25/M40 PF575_06145 PF07687 Peptidase dimerisation domain PF575_06150 PF00753 Metallo-beta-lactamase superfamily PF575_06160 PF03883 Peroxide stress protein YaaA PF575_06170 PF05690 Thiazole biosynthesis protein ThiG PF575_06180 PF04241 Protein of unknown function (DUF423) PF575_06185 PF04545 Sigma-70, region 4 PF575_06185 PF00140 Sigma-70 factor, region 1.2 PF575_06185 PF04542 Sigma-70 region 2 PF575_06200 PF00313 'Cold-shock' DNA-binding domain PF575_06205 PF00271 Helicase conserved C-terminal domain PF575_06205 PF00270 DEAD/DEAH box helicase PF575_06215 PF00881 Nitroreductase family PF575_06220 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PF575_06220 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PF575_06240 PF01180 Dihydroorotate dehydrogenase PF575_06245 PF02674 Colicin V production protein PF575_06250 PF00156 Phosphoribosyl transferase domain PF575_06265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF575_06265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF575_06270 PF01435 Peptidase family M48 PF575_06275 PF09424 Yqey-like protein PF575_06280 PF01165 Ribosomal protein S21 PF575_06285 PF00814 Glycoprotease family PF575_06305 PF03793 PASTA domain PF575_06305 PF00069 Protein kinase domain PF575_06330 PF08479 POTRA domain, ShlB-type PF575_06330 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PF575_06330 PF17287 POTRA domain PF575_06335 PF13018 Extended Signal Peptide of Type V secretion system PF575_06335 PF13332 Hemagglutinin repeat PF575_06335 PF13018 Extended Signal Peptide of Type V secretion system PF575_06335 PF05860 haemagglutination activity domain PF575_06335 PF04829 Pre-toxin domain with VENN motif PF575_06335 PF04829 Pre-toxin domain with VENN motif PF575_06335 PF05860 haemagglutination activity domain PF575_06335 PF13332 Hemagglutinin repeat PF575_06375 PF03466 LysR substrate binding domain PF575_06375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_06405 PF08946 Osmosensory transporter coiled coil PF575_06405 PF00083 Sugar (and other) transporter PF575_06410 PF00293 NUDIX domain PF575_06440 PF04403 Paraquat-inducible protein A PF575_06445 PF02470 MlaD protein PF575_06455 PF01177 Asp/Glu/Hydantoin racemase PF575_06460 PF00892 EamA-like transporter family PF575_06470 PF07995 Glucose / Sorbosone dehydrogenase PF575_06490 PF00375 Sodium:dicarboxylate symporter family PF575_06500 PF00753 Metallo-beta-lactamase superfamily PF575_06500 PF16123 Hydroxyacylglutathione hydrolase C-terminus PF575_06505 PF00528 Binding-protein-dependent transport system inner membrane component PF575_06510 PF09383 NIL domain PF575_06510 PF00005 ABC transporter PF575_06515 PF03180 NLPA lipoprotein PF575_06520 PF02844 Phosphoribosylglycinamide synthetase, N domain PF575_06520 PF02843 Phosphoribosylglycinamide synthetase, C domain PF575_06520 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PF575_06525 PF01808 AICARFT/IMPCHase bienzyme PF575_06525 PF02142 MGS-like domain PF575_06530 PF02954 Bacterial regulatory protein, Fis family PF575_06550 PF01134 Glucose inhibited division protein A PF575_06550 PF13932 GidA associated domain PF575_06560 PF14403 Circularly permuted ATP-grasp type 2 PF575_06570 PF08379 Bacterial transglutaminase-like N-terminal region PF575_06570 PF01841 Transglutaminase-like superfamily PF575_06580 PF00842 Alanine racemase, C-terminal domain PF575_06580 PF01168 Alanine racemase, N-terminal domain PF575_06585 PF00772 DnaB-like helicase N terminal domain PF575_06585 PF03796 DnaB-like helicase C terminal domain PF575_06590 PF03948 Ribosomal protein L9, C-terminal domain PF575_06590 PF01281 Ribosomal protein L9, N-terminal domain PF575_06595 PF01084 Ribosomal protein S18 PF575_06600 PF01250 Ribosomal protein S6 PF575_06605 PF01040 UbiA prenyltransferase family PF575_06610 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PF575_06615 PF00510 Cytochrome c oxidase subunit III PF575_06620 PF00115 Cytochrome C and Quinol oxidase polypeptide I PF575_06625 PF06481 COX Aromatic Rich Motif PF575_06625 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PF575_06635 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PF575_06635 PF02896 PEP-utilising enzyme, TIM barrel domain PF575_06635 PF00391 PEP-utilising enzyme, mobile domain PF575_06640 PF03618 Kinase/pyrophosphorylase PF575_06650 PF01522 Polysaccharide deacetylase PF575_06650 PF14883 Hypothetical glycosyl hydrolase family 13 PF575_06655 PF00535 Glycosyl transferase family 2 PF575_06660 PF13994 PgaD-like protein PF575_06670 PF00296 Luciferase-like monooxygenase PF575_06685 PF03466 LysR substrate binding domain PF575_06685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_06695 PF03462 PCRF domain PF575_06695 PF00472 RF-1 domain PF575_06700 PF13847 Methyltransferase domain PF575_06700 PF17827 PrmC N-terminal domain PF575_06705 PF12833 Helix-turn-helix domain PF575_06710 PF00106 short chain dehydrogenase PF575_06715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_06715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_06715 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_06720 PF13193 AMP-binding enzyme C-terminal domain PF575_06720 PF00501 AMP-binding enzyme PF575_06725 PF01613 Flavin reductase like domain PF575_06730 PF00899 ThiF family PF575_06735 PF03109 ABC1 family PF575_06740 PF02152 Dihydroneopterin aldolase PF575_06750 PF03814 Potassium-transporting ATPase A subunit PF575_06760 PF02669 K+-transporting ATPase, c chain PF575_06765 PF13493 Domain of unknown function (DUF4118) PF575_06765 PF02702 Osmosensitive K+ channel His kinase sensor domain PF575_06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_06765 PF00512 His Kinase A (phospho-acceptor) domain PF575_06770 PF00486 Transcriptional regulatory protein, C terminal PF575_06770 PF00072 Response regulator receiver domain PF575_06775 PF00120 Glutamine synthetase, catalytic domain PF575_06785 PF03232 Ubiquinone biosynthesis protein COQ7 PF575_06790 PF07690 Major Facilitator Superfamily PF575_06795 PF01103 Surface antigen PF575_06795 PF07244 Surface antigen variable number repeat PF575_06795 PF17243 POTRA domain TamA domain 1 PF575_06810 PF00330 Aconitase family (aconitate hydratase) PF575_06810 PF06434 Aconitate hydratase 2 N-terminus PF575_06810 PF11791 Aconitate B N-terminal domain PF575_06820 PF00027 Cyclic nucleotide-binding domain PF575_06820 PF00520 Ion transport protein PF575_06825 PF07690 Major Facilitator Superfamily PF575_06840 PF03466 LysR substrate binding domain PF575_06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_06845 PF04284 Protein of unknown function (DUF441) PF575_06855 PF01479 S4 domain PF575_06855 PF00849 RNA pseudouridylate synthase PF575_06870 PF01479 S4 domain PF575_06870 PF00849 RNA pseudouridylate synthase PF575_06875 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PF575_06880 PF08676 MutL C terminal dimerisation domain PF575_06880 PF01119 DNA mismatch repair protein, C-terminal domain PF575_06890 PF17209 Hfq protein PF575_06900 PF00881 Nitroreductase family PF575_06910 PF00149 Calcineurin-like phosphoesterase PF575_06915 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PF575_06920 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PF575_06920 PF00749 tRNA synthetases class I (E and Q), catalytic domain PF575_06925 PF00117 Glutamine amidotransferase class-I PF575_06925 PF00958 GMP synthase C terminal domain PF575_06925 PF02540 NAD synthase PF575_06930 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PF575_06935 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PF575_06940 PF13520 Amino acid permease PF575_06945 PF00171 Aldehyde dehydrogenase family PF575_06960 PF00465 Iron-containing alcohol dehydrogenase PF575_06965 PF05970 PIF1-like helicase PF575_06965 PF14493 Helix-turn-helix domain PF575_06975 PF06445 GyrI-like small molecule binding domain PF575_06980 PF02110 Hydroxyethylthiazole kinase family PF575_06995 PF11940 Domain of unknown function (DUF3458) Ig-like fold PF575_06995 PF01433 Peptidase family M1 domain PF575_06995 PF17432 Domain of unknown function (DUF3458_C) ARM repeats PF575_07010 PF00577 Outer membrane usher protein PF575_07010 PF13954 PapC N-terminal domain PF575_07010 PF13953 PapC C-terminal domain PF575_07035 PF01817 Chorismate mutase type II PF575_07040 PF01037 Lrp/AsnC ligand binding domain PF575_07050 PF00440 Bacterial regulatory proteins, tetR family PF575_07055 PF07715 TonB-dependent Receptor Plug Domain PF575_07055 PF00593 TonB dependent receptor PF575_07060 PF00924 Mechanosensitive ion channel PF575_07090 PF00593 TonB dependent receptor PF575_07090 PF07715 TonB-dependent Receptor Plug Domain PF575_07110 PF12848 ABC transporter PF575_07110 PF00005 ABC transporter PF575_07115 PF00582 Universal stress protein family PF575_07140 PF00690 Cation transporter/ATPase, N-terminus PF575_07140 PF00689 Cation transporting ATPase, C-terminus PF575_07145 PF02308 MgtC family PF575_07150 PF03594 Benzoate membrane transport protein PF575_07155 PF01037 Lrp/AsnC ligand binding domain PF575_07175 PF13005 zinc-finger binding domain of transposase IS66 PF575_07175 PF03050 Transposase IS66 family PF575_07175 PF13007 Transposase C of IS166 homeodomain PF575_07175 PF13817 IS66 C-terminal element PF575_07185 PF00923 Transaldolase/Fructose-6-phosphate aldolase PF575_07190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_07190 PF03466 LysR substrate binding domain PF575_07200 PF00108 Thiolase, N-terminal domain PF575_07200 PF02803 Thiolase, C-terminal domain PF575_07210 PF01575 MaoC like domain PF575_07215 PF00144 Beta-lactamase PF575_07225 PF07690 Major Facilitator Superfamily PF575_07230 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PF575_07230 PF12170 DNA polymerase III tau subunit V interacting with alpha PF575_07230 PF12169 DNA polymerase III subunits gamma and tau domain III PF575_07240 PF05506 Domain of unknown function (DUF756) PF575_07240 PF04185 Phosphoesterase family PF575_07245 PF03061 Thioesterase superfamily PF575_07250 PF00465 Iron-containing alcohol dehydrogenase PF575_07260 PF01451 Low molecular weight phosphotyrosine protein phosphatase PF575_07265 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PF575_07265 PF01565 FAD binding domain PF575_07280 PF01645 Conserved region in glutamate synthase PF575_07300 PF12832 MFS_1 like family PF575_07310 PF02785 Biotin carboxylase C-terminal domain PF575_07310 PF00289 Biotin carboxylase, N-terminal domain PF575_07310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF575_07315 PF00364 Biotin-requiring enzyme PF575_07320 PF01220 Dehydroquinase class II PF575_07325 PF13438 Domain of unknown function (DUF4113) PF575_07325 PF00817 impB/mucB/samB family PF575_07325 PF11799 impB/mucB/samB family C-terminal domain PF575_07330 PF00005 ABC transporter PF575_07335 PF00486 Transcriptional regulatory protein, C terminal PF575_07335 PF00072 Response regulator receiver domain PF575_07345 PF18267 Rubredoxin NAD+ reductase C-terminal domain PF575_07345 PF04324 BFD-like [2Fe-2S] binding domain PF575_07345 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PF575_07345 PF13806 Rieske-like [2Fe-2S] domain PF575_07345 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_07345 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PF575_07350 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_07350 PF18267 Rubredoxin NAD+ reductase C-terminal domain PF575_07350 PF04324 BFD-like [2Fe-2S] binding domain PF575_07350 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PF575_07350 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PF575_07355 PF04324 BFD-like [2Fe-2S] binding domain PF575_07355 PF00384 Molybdopterin oxidoreductase PF575_07355 PF01568 Molydopterin dinucleotide binding domain PF575_07355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PF575_07360 PF12804 MobA-like NTP transferase domain PF575_07365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PF575_07365 PF00384 Molybdopterin oxidoreductase PF575_07365 PF01568 Molydopterin dinucleotide binding domain PF575_07370 PF06463 Molybdenum Cofactor Synthesis C PF575_07370 PF04055 Radical SAM superfamily PF575_07380 PF02391 MoaE protein PF575_07385 PF01967 MoaC family PF575_07385 PF00994 Probable molybdopterin binding domain PF575_07390 PF00994 Probable molybdopterin binding domain PF575_07390 PF03454 MoeA C-terminal region (domain IV) PF575_07390 PF03453 MoeA N-terminal region (domain I and II) PF575_07395 PF01638 HxlR-like helix-turn-helix PF575_07400 PF00155 Aminotransferase class I and II PF575_07400 PF00392 Bacterial regulatory proteins, gntR family PF575_07405 PF00892 EamA-like transporter family PF575_07425 PF02635 DsrE/DsrF-like family PF575_07430 PF16363 GDP-mannose 4,6 dehydratase PF575_07435 PF10415 Fumarase C C-terminus PF575_07435 PF00206 Lyase PF575_07460 PF01266 FAD dependent oxidoreductase PF575_07470 PF02542 YgbB family PF575_07480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PF575_07480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PF575_07500 PF00158 Sigma-54 interaction domain PF575_07500 PF00072 Response regulator receiver domain PF575_07500 PF02954 Bacterial regulatory protein, Fis family PF575_07505 PF00989 PAS fold PF575_07505 PF00512 His Kinase A (phospho-acceptor) domain PF575_07505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_07515 PF00919 Uncharacterized protein family UPF0004 PF575_07515 PF04055 Radical SAM superfamily PF575_07515 PF18693 TRAM domain PF575_07520 PF00696 Amino acid kinase family PF575_07525 PF01765 Ribosome recycling factor PF575_07530 PF01255 Putative undecaprenyl diphosphate synthase PF575_07540 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PF575_07540 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PF575_07540 PF13288 DXP reductoisomerase C-terminal domain PF575_07545 PF02163 Peptidase family M50 PF575_07545 PF13180 PDZ domain PF575_07545 PF17820 PDZ domain PF575_07550 PF01103 Surface antigen PF575_07550 PF07244 Surface antigen variable number repeat PF575_07560 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PF575_07560 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_07565 PF07977 FabA-like domain PF575_07570 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_07570 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PF575_07585 PF02631 RecX family PF575_07590 PF00154 recA bacterial DNA recombination protein PF575_07595 PF01479 S4 domain PF575_07600 PF13419 Haloacid dehalogenase-like hydrolase PF575_07625 PF01037 Lrp/AsnC ligand binding domain PF575_07630 PF00266 Aminotransferase class-V PF575_07635 PF00324 Amino acid permease PF575_07650 PF05922 Peptidase inhibitor I9 PF575_07650 PF00082 Subtilase family PF575_07660 PF03050 Transposase IS66 family PF575_07660 PF13817 IS66 C-terminal element PF575_07660 PF13005 zinc-finger binding domain of transposase IS66 PF575_07660 PF13007 Transposase C of IS166 homeodomain PF575_07675 PF00916 Sulfate permease family PF575_07675 PF01740 STAS domain PF575_07680 PF02586 SOS response associated peptidase (SRAP) PF575_07685 PF07995 Glucose / Sorbosone dehydrogenase PF575_07705 PF13005 zinc-finger binding domain of transposase IS66 PF575_07705 PF13007 Transposase C of IS166 homeodomain PF575_07705 PF13817 IS66 C-terminal element PF575_07705 PF03050 Transposase IS66 family PF575_07715 PF03707 Bacterial signalling protein N terminal repeat PF575_07715 PF00563 EAL domain PF575_07715 PF00990 Diguanylate cyclase, GGDEF domain PF575_07730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PF575_07730 PF02378 Phosphotransferase system, EIIC PF575_07735 PF00294 pfkB family carbohydrate kinase PF575_07740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PF575_07740 PF00381 PTS HPr component phosphorylation site PF575_07740 PF02896 PEP-utilising enzyme, TIM barrel domain PF575_07740 PF00391 PEP-utilising enzyme, mobile domain PF575_07740 PF05524 PEP-utilising enzyme, N-terminal PF575_07765 PF05525 Branched-chain amino acid transport protein PF575_07770 PF00557 Metallopeptidase family M24 PF575_07775 PF03466 LysR substrate binding domain PF575_07775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_07785 PF00462 Glutaredoxin PF575_07790 PF00202 Aminotransferase class-III PF575_07795 PF00571 CBS domain PF575_07795 PF00478 IMP dehydrogenase / GMP reductase domain PF575_07820 PF02881 SRP54-type protein, helical bundle domain PF575_07820 PF00448 SRP54-type protein, GTPase domain PF575_07830 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) PF575_07840 PF08173 Membrane bound YbgT-like protein PF575_07845 PF02322 Cytochrome bd terminal oxidase subunit II PF575_07850 PF01654 Cytochrome bd terminal oxidase subunit I PF575_07860 PF03050 Transposase IS66 family PF575_07860 PF13817 IS66 C-terminal element PF575_07860 PF13007 Transposase C of IS166 homeodomain PF575_07860 PF13005 zinc-finger binding domain of transposase IS66 PF575_07875 PF07290 Protein of unknown function (DUF1449) PF575_07885 PF00294 pfkB family carbohydrate kinase PF575_07890 PF00593 TonB dependent receptor PF575_07890 PF07715 TonB-dependent Receptor Plug Domain PF575_07895 PF00675 Insulinase (Peptidase family M16) PF575_07895 PF08367 Peptidase M16C associated PF575_07895 PF05193 Peptidase M16 inactive domain PF575_07900 PF02253 Phospholipase A1 PF575_07905 PF02386 Cation transport protein PF575_07910 PF02254 TrkA-N domain PF575_07910 PF02080 TrkA-C domain PF575_07915 PF00585 C-terminal regulatory domain of Threonine dehydratase PF575_07915 PF00291 Pyridoxal-phosphate dependent enzyme PF575_07920 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PF575_07935 PF02774 Semialdehyde dehydrogenase, dimerisation domain PF575_07935 PF01118 Semialdehyde dehydrogenase, NAD binding domain PF575_07945 PF02617 ATP-dependent Clp protease adaptor protein ClpS PF575_07950 PF17871 AAA lid domain PF575_07950 PF02861 Clp amino terminal domain, pathogenicity island component PF575_07950 PF07724 AAA domain (Cdc48 subfamily) PF575_07950 PF00004 ATPase family associated with various cellular activities (AAA) PF575_07950 PF10431 C-terminal, D2-small domain, of ClpB protein PF575_07955 PF02694 Uncharacterised BCR, YnfA/UPF0060 family PF575_07960 PF00793 DAHP synthetase I family PF575_07975 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_07975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF575_08005 PF00117 Glutamine amidotransferase class-I PF575_08005 PF06418 CTP synthase N-terminus PF575_08010 PF00793 DAHP synthetase I family PF575_08015 PF03952 Enolase, N-terminal domain PF575_08015 PF00113 Enolase, C-terminal TIM barrel domain PF575_08020 PF04239 Protein of unknown function (DUF421) PF575_08025 PF04977 Septum formation initiator PF575_08030 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PF575_08035 PF01144 Coenzyme A transferase PF575_08040 PF01144 Coenzyme A transferase PF575_08045 PF02803 Thiolase, C-terminal domain PF575_08045 PF00108 Thiolase, N-terminal domain PF575_08050 PF00206 Lyase PF575_08050 PF10397 Adenylosuccinate lyase C-terminus PF575_08055 PF00561 alpha/beta hydrolase fold PF575_08060 PF07690 Major Facilitator Superfamily PF575_08065 PF02627 Carboxymuconolactone decarboxylase family PF575_08070 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal PF575_08070 PF00775 Dioxygenase PF575_08075 PF00775 Dioxygenase PF575_08080 PF01487 Type I 3-dehydroquinase PF575_08085 PF05048 Periplasmic copper-binding protein (NosD) PF575_08090 PF04966 Carbohydrate-selective porin, OprB family PF575_08095 PF13360 PQQ-like domain PF575_08095 PF01011 PQQ enzyme repeat PF575_08105 PF04143 Sulphur transport PF575_08115 PF00753 Metallo-beta-lactamase superfamily PF575_08120 PF01614 Bacterial transcriptional regulator PF575_08120 PF09339 IclR helix-turn-helix domain PF575_08125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_08125 PF03466 LysR substrate binding domain PF575_08130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_08130 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_08130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_08145 PF00106 short chain dehydrogenase PF575_08155 PF07690 Major Facilitator Superfamily PF575_08165 PF01425 Amidase PF575_08170 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF575_08185 PF00355 Rieske [2Fe-2S] domain PF575_08185 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF575_08200 PF00175 Oxidoreductase NAD-binding domain PF575_08200 PF00111 2Fe-2S iron-sulfur cluster binding domain PF575_08205 PF01613 Flavin reductase like domain PF575_08210 PF12833 Helix-turn-helix domain PF575_08210 PF02311 AraC-like ligand binding domain PF575_08215 PF07833 Copper amine oxidase N-terminal domain PF575_08215 PF02727 Copper amine oxidase, N2 domain PF575_08215 PF01179 Copper amine oxidase, enzyme domain PF575_08215 PF02728 Copper amine oxidase, N3 domain PF575_08225 PF00171 Aldehyde dehydrogenase family PF575_08230 PF01804 Penicillin amidase PF575_08235 PF12146 Serine aminopeptidase, S33 PF575_08240 PF00108 Thiolase, N-terminal domain PF575_08240 PF02803 Thiolase, C-terminal domain PF575_08245 PF01144 Coenzyme A transferase PF575_08250 PF01144 Coenzyme A transferase PF575_08255 PF00775 Dioxygenase PF575_08255 PF04444 Catechol dioxygenase N terminus PF575_08260 PF02426 Muconolactone delta-isomerase PF575_08265 PF13378 Enolase C-terminal domain-like PF575_08265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PF575_08270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_08270 PF03466 LysR substrate binding domain PF575_08280 PF07729 FCD domain PF575_08280 PF00392 Bacterial regulatory proteins, gntR family PF575_08285 PF00920 Dehydratase family PF575_08290 PF07690 Major Facilitator Superfamily PF575_08300 PF00171 Aldehyde dehydrogenase family PF575_08310 PF00561 alpha/beta hydrolase fold PF575_08315 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_08315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF575_08330 PF00376 MerR family regulatory protein PF575_08330 PF09278 MerR, DNA binding PF575_08340 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_08350 PF12706 Beta-lactamase superfamily domain PF575_08355 PF00440 Bacterial regulatory proteins, tetR family PF575_08355 PF08359 YsiA-like protein, C-terminal region PF575_08365 PF00857 Isochorismatase family PF575_08370 PF03466 LysR substrate binding domain PF575_08370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_08375 PF07995 Glucose / Sorbosone dehydrogenase PF575_08380 PF02254 TrkA-N domain PF575_08380 PF00999 Sodium/hydrogen exchanger family PF575_08390 PF07687 Peptidase dimerisation domain PF575_08390 PF01546 Peptidase family M20/M25/M40 PF575_08400 PF00145 C-5 cytosine-specific DNA methylase PF575_08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_08405 PF00512 His Kinase A (phospho-acceptor) domain PF575_08425 PF07690 Major Facilitator Superfamily PF575_08430 PF04909 Amidohydrolase PF575_08440 PF00392 Bacterial regulatory proteins, gntR family PF575_08440 PF07702 UTRA domain PF575_08445 PF08450 SMP-30/Gluconolactonase/LRE-like region PF575_08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_08455 PF03466 LysR substrate binding domain PF575_08480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF575_08480 PF00529 HlyD membrane-fusion protein of T1SS PF575_08495 PF00171 Aldehyde dehydrogenase family PF575_08500 PF00920 Dehydratase family PF575_08510 PF03466 LysR substrate binding domain PF575_08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_08515 PF01370 NAD dependent epimerase/dehydratase family PF575_08520 PF07690 Major Facilitator Superfamily PF575_08525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PF575_08525 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PF575_08530 PF06719 AraC-type transcriptional regulator N-terminus PF575_08530 PF12833 Helix-turn-helix domain PF575_08545 PF00107 Zinc-binding dehydrogenase PF575_08545 PF08240 Alcohol dehydrogenase GroES-like domain PF575_08555 PF01032 FecCD transport family PF575_08560 PF00005 ABC transporter PF575_08580 PF14572 Phosphoribosyl synthetase-associated domain PF575_08580 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PF575_08605 PF13533 Biotin-lipoyl like PF575_08610 PF07690 Major Facilitator Superfamily PF575_08635 PF01975 Survival protein SurE PF575_08645 PF13291 ACT domain PF575_08645 PF04607 Region found in RelA / SpoT proteins PF575_08645 PF02824 TGS domain PF575_08650 PF01966 HD domain PF575_08650 PF13286 Phosphohydrolase-associated domain PF575_08670 PF05970 PIF1-like helicase PF575_08670 PF02689 Helicase PF575_08705 PF07690 Major Facilitator Superfamily PF575_08705 PF00083 Sugar (and other) transporter PF575_08710 PF03573 outer membrane porin, OprD family PF575_08725 PF13007 Transposase C of IS166 homeodomain PF575_08725 PF13005 zinc-finger binding domain of transposase IS66 PF575_08725 PF03050 Transposase IS66 family PF575_08725 PF13817 IS66 C-terminal element PF575_08730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_08730 PF03466 LysR substrate binding domain PF575_08740 PF09339 IclR helix-turn-helix domain PF575_08740 PF01614 Bacterial transcriptional regulator PF575_08775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PF575_08775 PF02753 Pili assembly chaperone PapD, C-terminal domain PF575_08780 PF00577 Outer membrane usher protein PF575_08780 PF13953 PapC C-terminal domain PF575_08780 PF13954 PapC N-terminal domain PF575_08785 PF00419 Fimbrial protein PF575_08795 PF08240 Alcohol dehydrogenase GroES-like domain PF575_08795 PF00107 Zinc-binding dehydrogenase PF575_08805 PF00199 Catalase PF575_08825 PF03050 Transposase IS66 family PF575_08825 PF13817 IS66 C-terminal element PF575_08825 PF13007 Transposase C of IS166 homeodomain PF575_08825 PF13005 zinc-finger binding domain of transposase IS66 PF575_08860 PF01244 Membrane dipeptidase (Peptidase family M19) PF575_08865 PF13186 Iron-sulfur cluster-binding domain PF575_08865 PF04055 Radical SAM superfamily PF575_08870 PF05402 Coenzyme PQQ synthesis protein D (PqqD) PF575_08875 PF03070 TENA/THI-4/PQQC family PF575_08880 PF12706 Beta-lactamase superfamily domain PF575_08885 PF08042 PqqA family PF575_08890 PF02503 Polyphosphate kinase middle domain PF575_08890 PF13089 Polyphosphate kinase N-terminal domain PF575_08890 PF13090 Polyphosphate kinase C-terminal domain 2 PF575_08890 PF17941 Polyphosphate kinase C-terminal domain 1 PF575_08895 PF00149 Calcineurin-like phosphoesterase PF575_08905 PF00857 Isochorismatase family PF575_08905 PF00550 Phosphopantetheine attachment site PF575_08910 PF00106 short chain dehydrogenase PF575_08915 PF00005 ABC transporter PF575_08915 PF03459 TOBE domain PF575_08920 PF00528 Binding-protein-dependent transport system inner membrane component PF575_08930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_08930 PF03459 TOBE domain PF575_08935 PF00355 Rieske [2Fe-2S] domain PF575_08935 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF575_08940 PF00866 Ring hydroxylating beta subunit PF575_08945 PF00970 Oxidoreductase FAD-binding domain PF575_08945 PF00111 2Fe-2S iron-sulfur cluster binding domain PF575_08945 PF00175 Oxidoreductase NAD-binding domain PF575_08950 PF14525 AraC-binding-like domain PF575_08950 PF12833 Helix-turn-helix domain PF575_08960 PF01613 Flavin reductase like domain PF575_08975 PF01738 Dienelactone hydrolase family PF575_08980 PF07690 Major Facilitator Superfamily PF575_08985 PF06719 AraC-type transcriptional regulator N-terminus PF575_08985 PF12833 Helix-turn-helix domain PF575_09005 PF00440 Bacterial regulatory proteins, tetR family PF575_09025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_09025 PF03466 LysR substrate binding domain PF575_09030 PF01144 Coenzyme A transferase PF575_09035 PF01144 Coenzyme A transferase PF575_09040 PF02667 Short chain fatty acid transporter PF575_09045 PF00108 Thiolase, N-terminal domain PF575_09045 PF02803 Thiolase, C-terminal domain PF575_09050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_09050 PF03466 LysR substrate binding domain PF575_09055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_09055 PF03466 LysR substrate binding domain PF575_09070 PF10415 Fumarase C C-terminus PF575_09070 PF00206 Lyase PF575_09075 PF07715 TonB-dependent Receptor Plug Domain PF575_09075 PF00593 TonB dependent receptor PF575_09080 PF00083 Sugar (and other) transporter PF575_09095 PF00005 ABC transporter PF575_09100 PF00528 Binding-protein-dependent transport system inner membrane component PF575_09105 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PF575_09120 PF07702 UTRA domain PF575_09120 PF00392 Bacterial regulatory proteins, gntR family PF575_09125 PF02417 Chromate transporter PF575_09130 PF02525 Flavodoxin-like fold PF575_09135 PF01638 HxlR-like helix-turn-helix PF575_09140 PF06445 GyrI-like small molecule binding domain PF575_09140 PF12833 Helix-turn-helix domain PF575_09155 PF01925 Sulfite exporter TauE/SafE PF575_09170 PF04273 Putative phosphatase (DUF442) PF575_09170 PF00753 Metallo-beta-lactamase superfamily PF575_09175 PF02954 Bacterial regulatory protein, Fis family PF575_09175 PF00072 Response regulator receiver domain PF575_09175 PF00158 Sigma-54 interaction domain PF575_09180 PF01062 Bestrophin, RFP-TM, chloride channel PF575_09185 PF08240 Alcohol dehydrogenase GroES-like domain PF575_09185 PF00107 Zinc-binding dehydrogenase PF575_09190 PF00106 short chain dehydrogenase PF575_09195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF575_09195 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_09200 PF02817 e3 binding domain PF575_09200 PF00364 Biotin-requiring enzyme PF575_09200 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PF575_09205 PF02780 Transketolase, C-terminal domain PF575_09205 PF02779 Transketolase, pyrimidine binding domain PF575_09210 PF00676 Dehydrogenase E1 component PF575_09215 PF04055 Radical SAM superfamily PF575_09230 PF00990 Diguanylate cyclase, GGDEF domain PF575_09230 PF08448 PAS fold PF575_09235 PF13817 IS66 C-terminal element PF575_09235 PF13007 Transposase C of IS166 homeodomain PF575_09235 PF13005 zinc-finger binding domain of transposase IS66 PF575_09235 PF03050 Transposase IS66 family PF575_09250 PF01264 Chorismate synthase PF575_09255 PF05175 Methyltransferase small domain PF575_09260 PF00291 Pyridoxal-phosphate dependent enzyme PF575_09270 PF00004 ATPase family associated with various cellular activities (AAA) PF575_09270 PF17862 AAA+ lid domain PF575_09270 PF01434 Peptidase family M41 PF575_09280 PF05166 YcgL domain PF575_09300 PF01612 3'-5' exonuclease PF575_09300 PF00570 HRDC domain PF575_09305 PF02132 RecR protein PF575_09305 PF13662 Toprim domain PF575_09310 PF02575 YbaB/EbfC DNA-binding family PF575_09320 PF01053 Cys/Met metabolism PLP-dependent enzyme PF575_09325 PF00561 alpha/beta hydrolase fold PF575_09330 PF08241 Methyltransferase domain PF575_09360 PF01230 HIT domain PF575_09370 PF13007 Transposase C of IS166 homeodomain PF575_09370 PF13005 zinc-finger binding domain of transposase IS66 PF575_09370 PF03050 Transposase IS66 family PF575_09370 PF13817 IS66 C-terminal element PF575_09410 PF00005 ABC transporter PF575_09415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF575_09425 PF02684 Lipid-A-disaccharide synthetase PF575_09430 PF00593 TonB dependent receptor PF575_09430 PF07715 TonB-dependent Receptor Plug Domain PF575_09450 PF01925 Sulfite exporter TauE/SafE PF575_09455 PF00793 DAHP synthetase I family PF575_09460 PF02654 Cobalamin-5-phosphate synthase PF575_09475 PF02277 Phosphoribosyltransferase PF575_09480 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PF575_09490 PF13419 Haloacid dehalogenase-like hydrolase PF575_09515 PF00593 TonB dependent receptor PF575_09515 PF07715 TonB-dependent Receptor Plug Domain PF575_09520 PF03737 Aldolase/RraA PF575_09530 PF06276 Ferric iron reductase FhuF-like transporter PF575_09530 PF04183 IucA / IucC family PF575_09535 PF06276 Ferric iron reductase FhuF-like transporter PF575_09535 PF04183 IucA / IucC family PF575_09540 PF07690 Major Facilitator Superfamily PF575_09545 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PF575_09550 PF06276 Ferric iron reductase FhuF-like transporter PF575_09550 PF04183 IucA / IucC family PF575_09555 PF04073 Aminoacyl-tRNA editing domain PF575_09565 PF03109 ABC1 family PF575_09570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_09570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_09570 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_09575 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_09575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_09575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_09580 PF00487 Fatty acid desaturase PF575_09585 PF12852 Cupin PF575_09585 PF12833 Helix-turn-helix domain PF575_09590 PF00639 PPIC-type PPIASE domain PF575_09590 PF09312 SurA N-terminal domain PF575_09595 PF00216 Bacterial DNA-binding protein PF575_09610 PF02082 Transcriptional regulator PF575_09615 PF00266 Aminotransferase class-V PF575_09620 PF01592 NifU-like N terminal domain PF575_09625 PF01521 Iron-sulphur cluster biosynthesis PF575_09630 PF00226 DnaJ domain PF575_09630 PF07743 HSCB C-terminal oligomerisation domain PF575_09635 PF00012 Hsp70 protein PF575_09640 PF00111 2Fe-2S iron-sulfur cluster binding domain PF575_09645 PF00211 Adenylate and Guanylate cyclase catalytic domain PF575_09655 PF00271 Helicase conserved C-terminal domain PF575_09655 PF00270 DEAD/DEAH box helicase PF575_09655 PF02559 CarD-like/TRCF domain PF575_09655 PF17757 UvrB interaction domain PF575_09655 PF03461 TRCF domain PF575_09675 PF03737 Aldolase/RraA PF575_09680 PF13460 NAD(P)H-binding PF575_09685 PF01649 Ribosomal protein S20 PF575_09695 PF00459 Inositol monophosphatase family PF575_09710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PF575_09710 PF00005 ABC transporter PF575_09715 PF00528 Binding-protein-dependent transport system inner membrane component PF575_09720 PF00528 Binding-protein-dependent transport system inner membrane component PF575_09725 PF01432 Peptidase family M3 PF575_09755 PF01618 MotA/TolQ/ExbB proton channel family PF575_09760 PF02472 Biopolymer transport protein ExbD/TolR PF575_09765 PF02472 Biopolymer transport protein ExbD/TolR PF575_09775 PF01274 Malate synthase PF575_09780 PF03969 AFG1-like ATPase PF575_09790 PF00743 Flavin-binding monooxygenase-like PF575_09800 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PF575_09810 PF00216 Bacterial DNA-binding protein PF575_09815 PF00575 S1 RNA binding domain PF575_09820 PF02224 Cytidylate kinase PF575_09830 PF14437 MafB19-like deaminase PF575_09840 PF03167 Uracil DNA glycosylase superfamily PF575_09850 PF03934 Type II secretion system (T2SS), protein K PF575_09855 PF07963 Prokaryotic N-terminal methylation motif PF575_09855 PF11612 Type II secretion system (T2SS), protein J PF575_09860 PF07963 Prokaryotic N-terminal methylation motif PF575_09860 PF02501 Type II secretion system (T2SS), protein I PF575_09875 PF01026 TatD related DNase PF575_09885 PF09115 DNA polymerase III, delta subunit, C terminal PF575_09890 PF02348 Cytidylyltransferase PF575_09895 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PF575_09900 PF00664 ABC transporter transmembrane region PF575_09900 PF00005 ABC transporter PF575_09910 PF01618 MotA/TolQ/ExbB proton channel family PF575_09915 PF17762 HTH domain found in ParB protein PF575_09915 PF02195 ParB-like nuclease domain PF575_09920 PF13614 AAA domain PF575_09925 PF02527 rRNA small subunit methyltransferase G PF575_09930 PF00483 Nucleotidyl transferase PF575_09935 PF01636 Phosphotransferase enzyme family PF575_09940 PF04453 LPS transport system D PF575_09940 PF03968 OstA-like protein PF575_09945 PF00639 PPIC-type PPIASE domain PF575_09945 PF09312 SurA N-terminal domain PF575_09950 PF01116 Fructose-bisphosphate aldolase class-II PF575_09960 PF00162 Phosphoglycerate kinase PF575_09970 PF02545 Maf-like protein PF575_09975 PF08007 Cupin superfamily protein PF575_09990 PF00375 Sodium:dicarboxylate symporter family PF575_09995 PF06912 Protein of unknown function (DUF1275) PF575_10000 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) PF575_10005 PF00664 ABC transporter transmembrane region PF575_10005 PF00005 ABC transporter PF575_10015 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF575_10015 PF12833 Helix-turn-helix domain PF575_10020 PF01597 Glycine cleavage H-protein PF575_10025 PF02146 Sir2 family PF575_10030 PF00474 Sodium:solute symporter family PF575_10035 PF01037 Lrp/AsnC ligand binding domain PF575_10040 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PF575_10040 PF01619 Proline dehydrogenase PF575_10040 PF14850 DNA-binding domain of Proline dehydrogenase PF575_10040 PF00171 Aldehyde dehydrogenase family PF575_10045 PF04229 GrpB protein PF575_10050 PF05958 tRNA (Uracil-5-)-methyltransferase PF575_10060 PF09992 Phosphodiester glycosidase PF575_10070 PF04264 YceI-like domain PF575_10080 PF02779 Transketolase, pyrimidine binding domain PF575_10080 PF02780 Transketolase, C-terminal domain PF575_10080 PF00456 Transketolase, thiamine diphosphate binding domain PF575_10085 PF00438 S-adenosylmethionine synthetase, N-terminal domain PF575_10085 PF02772 S-adenosylmethionine synthetase, central domain PF575_10085 PF02773 S-adenosylmethionine synthetase, C-terminal domain PF575_10110 PF13007 Transposase C of IS166 homeodomain PF575_10110 PF13817 IS66 C-terminal element PF575_10110 PF13005 zinc-finger binding domain of transposase IS66 PF575_10110 PF03050 Transposase IS66 family PF575_10130 PF00905 Penicillin binding protein transpeptidase domain PF575_10145 PF02075 Crossover junction endodeoxyribonuclease RuvC PF575_10150 PF01256 Carbohydrate kinase PF575_10150 PF03853 YjeF-related protein N-terminus PF575_10155 PF08331 Domain of unknown function (DUF1730) PF575_10160 PF04055 Radical SAM superfamily PF575_10160 PF06968 Biotin and Thiamin Synthesis associated domain PF575_10175 PF16970 Type-1 fimbrial protein, A PF575_10180 PF02753 Pili assembly chaperone PapD, C-terminal domain PF575_10180 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PF575_10185 PF00577 Outer membrane usher protein PF575_10185 PF13953 PapC C-terminal domain PF575_10185 PF13954 PapC N-terminal domain PF575_10220 PF13007 Transposase C of IS166 homeodomain PF575_10220 PF13817 IS66 C-terminal element PF575_10220 PF03050 Transposase IS66 family PF575_10220 PF13005 zinc-finger binding domain of transposase IS66 PF575_10235 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PF575_10245 PF03466 LysR substrate binding domain PF575_10245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_10265 PF00440 Bacterial regulatory proteins, tetR family PF575_10275 PF01709 Transcriptional regulator PF575_10280 PF01037 Lrp/AsnC ligand binding domain PF575_10290 PF00005 ABC transporter PF575_10295 PF00528 Binding-protein-dependent transport system inner membrane component PF575_10300 PF00528 Binding-protein-dependent transport system inner membrane component PF575_10315 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF575_10315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_10325 PF00296 Luciferase-like monooxygenase PF575_10330 PF03180 NLPA lipoprotein PF575_10335 PF03180 NLPA lipoprotein PF575_10340 PF00005 ABC transporter PF575_10340 PF09383 NIL domain PF575_10345 PF00528 Binding-protein-dependent transport system inner membrane component PF575_10350 PF01926 50S ribosome-binding GTPase PF575_10350 PF06071 Protein of unknown function (DUF933) PF575_10375 PF03591 AzlC protein PF575_10380 PF05437 Branched-chain amino acid transport protein (AzlD) PF575_10390 PF02222 ATP-grasp domain PF575_10395 PF08335 GlnD PII-uridylyltransferase PF575_10395 PF01966 HD domain PF575_10395 PF01909 Nucleotidyltransferase domain PF575_10400 PF00155 Aminotransferase class I and II PF575_10410 PF13005 zinc-finger binding domain of transposase IS66 PF575_10410 PF13817 IS66 C-terminal element PF575_10410 PF13007 Transposase C of IS166 homeodomain PF575_10410 PF03050 Transposase IS66 family PF575_10430 PF12852 Cupin PF575_10430 PF12833 Helix-turn-helix domain PF575_10435 PF00255 Glutathione peroxidase PF575_10440 PF01641 SelR domain PF575_10445 PF00155 Aminotransferase class I and II PF575_10450 PF00375 Sodium:dicarboxylate symporter family PF575_10455 PF13737 Transposase DDE domain PF575_10460 PF17763 Glutaminase/Asparaginase C-terminal domain PF575_10460 PF00710 Asparaginase, N-terminal PF575_10465 PF07733 Bacterial DNA polymerase III alpha NTPase domain PF575_10465 PF02811 PHP domain PF575_10465 PF01336 OB-fold nucleic acid binding domain PF575_10465 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PF575_10465 PF14579 Helix-hairpin-helix motif PF575_10470 PF00588 SpoU rRNA Methylase family PF575_10475 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_10490 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_10490 PF13192 Thioredoxin domain PF575_10505 PF03466 LysR substrate binding domain PF575_10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_10510 PF01758 Sodium Bile acid symporter family PF575_10515 PF01022 Bacterial regulatory protein, arsR family PF575_10520 PF03960 ArsC family PF575_10530 PF01979 Amidohydrolase family PF575_10530 PF13382 Adenine deaminase C-terminal domain PF575_10540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_10540 PF03466 LysR substrate binding domain PF575_10550 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PF575_10555 PF01177 Asp/Glu/Hydantoin racemase PF575_10560 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PF575_10565 PF00528 Binding-protein-dependent transport system inner membrane component PF575_10570 PF00005 ABC transporter PF575_10575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PF575_10595 PF00083 Sugar (and other) transporter PF575_10600 PF00296 Luciferase-like monooxygenase PF575_10615 PF01654 Cytochrome bd terminal oxidase subunit I PF575_10620 PF02322 Cytochrome bd terminal oxidase subunit II PF575_10630 PF00392 Bacterial regulatory proteins, gntR family PF575_10630 PF00155 Aminotransferase class I and II PF575_10635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_10635 PF03466 LysR substrate binding domain PF575_10650 PF00698 Acyl transferase domain PF575_10655 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG PF575_10665 PF01039 Carboxyl transferase domain PF575_10670 PF06857 Malonate decarboxylase delta subunit (MdcD) PF575_10675 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase PF575_10680 PF16957 Malonate decarboxylase, alpha subunit, transporter PF575_10685 PF03466 LysR substrate binding domain PF575_10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_10695 PF07690 Major Facilitator Superfamily PF575_10710 PF00155 Aminotransferase class I and II PF575_10710 PF00392 Bacterial regulatory proteins, gntR family PF575_10715 PF04172 LrgB-like family PF575_10720 PF03788 LrgA family PF575_10725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_10725 PF03466 LysR substrate binding domain PF575_10730 PF02798 Glutathione S-transferase, N-terminal domain PF575_10730 PF14834 Glutathione S-transferase, C-terminal domain PF575_10735 PF02798 Glutathione S-transferase, N-terminal domain PF575_10740 PF03466 LysR substrate binding domain PF575_10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_10750 PF00581 Rhodanese-like domain PF575_10755 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_10765 PF00266 Aminotransferase class-V PF575_10770 PF01810 LysE type translocator PF575_10775 PF03466 LysR substrate binding domain PF575_10775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_10785 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF575_10790 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF575_10795 PF00005 ABC transporter PF575_10800 PF00528 Binding-protein-dependent transport system inner membrane component PF575_10805 PF00528 Binding-protein-dependent transport system inner membrane component PF575_10820 PF00072 Response regulator receiver domain PF575_10825 PF09308 LuxQ, periplasmic PF575_10825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_10825 PF00072 Response regulator receiver domain PF575_10825 PF00512 His Kinase A (phospho-acceptor) domain PF575_10835 PF01037 Lrp/AsnC ligand binding domain PF575_10835 PF13404 AsnC-type helix-turn-helix domain PF575_10845 PF00717 Peptidase S24-like PF575_10880 PF02464 Competence-damaged protein PF575_10880 PF18146 Damage-inducible protein CinA KH domain PF575_10880 PF00994 Probable molybdopterin binding domain PF575_10915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_10915 PF03466 LysR substrate binding domain PF575_10935 PF13193 AMP-binding enzyme C-terminal domain PF575_10935 PF00501 AMP-binding enzyme PF575_10940 PF00440 Bacterial regulatory proteins, tetR family PF575_10945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_10945 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_10945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_10950 PF01039 Carboxyl transferase domain PF575_10955 PF00378 Enoyl-CoA hydratase/isomerase PF575_10960 PF18140 Propionyl-coenzyme A carboxylase BT domain PF575_10960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF575_10960 PF00364 Biotin-requiring enzyme PF575_10960 PF00289 Biotin carboxylase, N-terminal domain PF575_10960 PF02785 Biotin carboxylase C-terminal domain PF575_10965 PF00682 HMGL-like PF575_10970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_10970 PF03466 LysR substrate binding domain PF575_10985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_10985 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_10985 PF12806 Acetyl-CoA dehydrogenase C-terminal like PF575_10985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_10995 PF07690 Major Facilitator Superfamily PF575_11005 PF01144 Coenzyme A transferase PF575_11010 PF01144 Coenzyme A transferase PF575_11015 PF07690 Major Facilitator Superfamily PF575_11020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_11020 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_11020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_11025 PF00378 Enoyl-CoA hydratase/isomerase PF575_11035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF575_11035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF575_11035 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain PF575_11040 PF00108 Thiolase, N-terminal domain PF575_11040 PF02803 Thiolase, C-terminal domain PF575_11045 PF09339 IclR helix-turn-helix domain PF575_11050 PF07690 Major Facilitator Superfamily PF575_11055 PF03060 Nitronate monooxygenase PF575_11060 PF00378 Enoyl-CoA hydratase/isomerase PF575_11065 PF09339 IclR helix-turn-helix domain PF575_11070 PF02515 CoA-transferase family III PF575_11075 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_11075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_11075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_11080 PF07690 Major Facilitator Superfamily PF575_11085 PF13419 Haloacid dehalogenase-like hydrolase PF575_11090 PF00266 Aminotransferase class-V PF575_11095 PF01266 FAD dependent oxidoreductase PF575_11100 PF00528 Binding-protein-dependent transport system inner membrane component PF575_11105 PF08402 TOBE domain PF575_11105 PF00005 ABC transporter PF575_11115 PF07702 UTRA domain PF575_11115 PF00392 Bacterial regulatory proteins, gntR family PF575_11120 PF01494 FAD binding domain PF575_11125 PF01614 Bacterial transcriptional regulator PF575_11125 PF09339 IclR helix-turn-helix domain PF575_11130 PF02525 Flavodoxin-like fold PF575_11135 PF03466 LysR substrate binding domain PF575_11135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_11140 PF02627 Carboxymuconolactone decarboxylase family PF575_11145 PF00171 Aldehyde dehydrogenase family PF575_11155 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PF575_11165 PF00171 Aldehyde dehydrogenase family PF575_11170 PF00296 Luciferase-like monooxygenase PF575_11175 PF01613 Flavin reductase like domain PF575_11180 PF12697 Alpha/beta hydrolase family PF575_11200 PF01292 Prokaryotic cytochrome b561 PF575_11205 PF00199 Catalase PF575_11230 PF13195 Protein of unknown function (DUF4011) PF575_11230 PF13087 AAA domain PF575_11230 PF13086 AAA domain PF575_11230 PF13195 Protein of unknown function (DUF4011) PF575_11230 PF13087 AAA domain PF575_11230 PF13086 AAA domain PF575_11235 PF03061 Thioesterase superfamily PF575_11240 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_11245 PF07848 PaaX-like protein PF575_11245 PF08223 PaaX-like protein C-terminal domain PF575_11250 PF00501 AMP-binding enzyme PF575_11250 PF14535 AMP-binding enzyme C-terminal domain PF575_11255 PF02803 Thiolase, C-terminal domain PF575_11255 PF00108 Thiolase, N-terminal domain PF575_11260 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF575_11260 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF575_11260 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain PF575_11265 PF00378 Enoyl-CoA hydratase/isomerase PF575_11270 PF00378 Enoyl-CoA hydratase/isomerase PF575_11275 PF00175 Oxidoreductase NAD-binding domain PF575_11275 PF00111 2Fe-2S iron-sulfur cluster binding domain PF575_11275 PF00970 Oxidoreductase FAD-binding domain PF575_11280 PF01883 Iron-sulfur cluster assembly protein PF575_11285 PF05138 Phenylacetic acid catabolic protein PF575_11290 PF06243 Phenylacetic acid degradation B PF575_11295 PF05138 Phenylacetic acid catabolic protein PF575_11300 PF01575 MaoC like domain PF575_11300 PF00171 Aldehyde dehydrogenase family PF575_11305 PF03313 Serine dehydratase alpha chain PF575_11305 PF03315 Serine dehydratase beta chain PF575_11310 PF13520 Amino acid permease PF575_11315 PF00171 Aldehyde dehydrogenase family PF575_11320 PF00083 Sugar (and other) transporter PF575_11330 PF04324 BFD-like [2Fe-2S] binding domain PF575_11330 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_11340 PF01266 FAD dependent oxidoreductase PF575_11345 PF05544 Proline racemase PF575_11350 PF00392 Bacterial regulatory proteins, gntR family PF575_11360 PF00701 Dihydrodipicolinate synthetase family PF575_11370 PF00376 MerR family regulatory protein PF575_11370 PF09278 MerR, DNA binding PF575_11380 PF02677 Epoxyqueuosine reductase QueH PF575_11395 PF07690 Major Facilitator Superfamily PF575_11400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PF575_11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_11410 PF03466 LysR substrate binding domain PF575_11430 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE PF575_11435 PF06812 ImpA, N-terminal, type VI secretion system PF575_11440 PF10431 C-terminal, D2-small domain, of ClpB protein PF575_11440 PF17871 AAA lid domain PF575_11440 PF07724 AAA domain (Cdc48 subfamily) PF575_11440 PF00004 ATPase family associated with various cellular activities (AAA) PF575_11450 PF00691 OmpA family PF575_11450 PF01389 OmpA-like transmembrane domain PF575_11460 PF06744 Type VI secretion protein IcmF C-terminal PF575_11460 PF14331 ImcF-related N-terminal domain PF575_11460 PF06761 Intracellular multiplication and human macrophage-killing PF575_11490 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath PF575_11515 PF00005 ABC transporter PF575_11520 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF575_11525 PF01425 Amidase PF575_11530 PF08753 NikR C terminal nickel binding domain PF575_11530 PF01402 Ribbon-helix-helix protein, copG family PF575_11545 PF01638 HxlR-like helix-turn-helix PF575_11550 PF02525 Flavodoxin-like fold PF575_11555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF575_11555 PF00289 Biotin carboxylase, N-terminal domain PF575_11555 PF02785 Biotin carboxylase C-terminal domain PF575_11570 PF13823 Alcohol dehydrogenase GroES-associated PF575_11570 PF00107 Zinc-binding dehydrogenase PF575_11570 PF08240 Alcohol dehydrogenase GroES-like domain PF575_11595 PF13018 Extended Signal Peptide of Type V secretion system PF575_11595 PF13332 Hemagglutinin repeat PF575_11595 PF05860 haemagglutination activity domain PF575_11595 PF04829 Pre-toxin domain with VENN motif PF575_11600 PF08479 POTRA domain, ShlB-type PF575_11600 PF17287 POTRA domain PF575_11600 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PF575_11605 PF00654 Voltage gated chloride channel PF575_11610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF575_11610 PF00364 Biotin-requiring enzyme PF575_11610 PF00289 Biotin carboxylase, N-terminal domain PF575_11610 PF02785 Biotin carboxylase C-terminal domain PF575_11620 PF07286 Protein of unknown function (DUF1445) PF575_11625 PF03746 LamB/YcsF family PF575_11630 PF01566 Natural resistance-associated macrophage protein PF575_11635 PF03466 LysR substrate binding domain PF575_11635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_11655 PF13419 Haloacid dehalogenase-like hydrolase PF575_11675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF575_11675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF575_11695 PF07690 Major Facilitator Superfamily PF575_11710 PF03279 Bacterial lipid A biosynthesis acyltransferase PF575_11715 PF00563 EAL domain PF575_11715 PF00990 Diguanylate cyclase, GGDEF domain PF575_11715 PF03707 Bacterial signalling protein N terminal repeat PF575_11720 PF00892 EamA-like transporter family PF575_11725 PF01037 Lrp/AsnC ligand binding domain PF575_11730 PF00488 MutS domain V PF575_11730 PF05190 MutS family domain IV PF575_11730 PF05188 MutS domain II PF575_11730 PF01624 MutS domain I PF575_11730 PF05192 MutS domain III PF575_11740 PF11953 Domain of unknown function (DUF3470) PF575_11740 PF00037 4Fe-4S binding domain PF575_11750 PF01596 O-methyltransferase PF575_11760 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_11765 PF01205 Uncharacterized protein family UPF0029 PF575_11780 PF13817 IS66 C-terminal element PF575_11780 PF03050 Transposase IS66 family PF575_11780 PF13005 zinc-finger binding domain of transposase IS66 PF575_11780 PF13007 Transposase C of IS166 homeodomain PF575_11800 PF02321 Outer membrane efflux protein PF575_11805 PF00005 ABC transporter PF575_11805 PF12399 Branched-chain amino acid ATP-binding cassette transporter PF575_11810 PF03968 OstA-like protein PF575_11825 PF00571 CBS domain PF575_11825 PF01380 SIS domain PF575_11830 PF09190 DALR domain PF575_11830 PF01406 tRNA synthetases class I (C) catalytic domain PF575_11855 PF01638 HxlR-like helix-turn-helix PF575_11860 PF07690 Major Facilitator Superfamily PF575_11885 PF03807 NADP oxidoreductase coenzyme F420-dependent PF575_11885 PF14748 Pyrroline-5-carboxylate reductase dimerisation PF575_11895 PF00313 'Cold-shock' DNA-binding domain PF575_11900 PF01810 LysE type translocator PF575_11930 PF02601 Exonuclease VII, large subunit PF575_11930 PF13742 OB-fold nucleic acid binding domain PF575_11965 PF09278 MerR, DNA binding PF575_11965 PF00376 MerR family regulatory protein PF575_11970 PF00403 Heavy-metal-associated domain PF575_11980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_11980 PF03466 LysR substrate binding domain PF575_11990 PF00355 Rieske [2Fe-2S] domain PF575_11990 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF575_11995 PF00866 Ring hydroxylating beta subunit PF575_12000 PF00970 Oxidoreductase FAD-binding domain PF575_12000 PF00111 2Fe-2S iron-sulfur cluster binding domain PF575_12000 PF00175 Oxidoreductase NAD-binding domain PF575_12005 PF00106 short chain dehydrogenase PF575_12010 PF03594 Benzoate membrane transport protein PF575_12015 PF07690 Major Facilitator Superfamily PF575_12025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PF575_12025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PF575_12030 PF11898 Domain of unknown function (DUF3418) PF575_12030 PF04408 Helicase associated domain (HA2) PF575_12030 PF00271 Helicase conserved C-terminal domain PF575_12030 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PF575_12030 PF00270 DEAD/DEAH box helicase PF575_12035 PF00578 AhpC/TSA family PF575_12035 PF10417 C-terminal domain of 1-Cys peroxiredoxin PF575_12055 PF13192 Thioredoxin domain PF575_12055 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_12065 PF00043 Glutathione S-transferase, C-terminal domain PF575_12065 PF02798 Glutathione S-transferase, N-terminal domain PF575_12075 PF02390 Putative methyltransferase PF575_12080 PF00043 Glutathione S-transferase, C-terminal domain PF575_12080 PF13417 Glutathione S-transferase, N-terminal domain PF575_12090 PF13488 Glycine zipper PF575_12090 PF00691 OmpA family PF575_12095 PF01979 Amidohydrolase family PF575_12100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PF575_12100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PF575_12110 PF01170 Putative RNA methylase family UPF0020 PF575_12110 PF10672 S-adenosylmethionine-dependent methyltransferase PF575_12110 PF02926 THUMP domain PF575_12125 PF00004 ATPase family associated with various cellular activities (AAA) PF575_12125 PF07724 AAA domain (Cdc48 subfamily) PF575_12125 PF17871 AAA lid domain PF575_12125 PF02861 Clp amino terminal domain, pathogenicity island component PF575_12125 PF10431 C-terminal, D2-small domain, of ClpB protein PF575_12140 PF02566 OsmC-like protein PF575_12150 PF00027 Cyclic nucleotide-binding domain PF575_12150 PF13545 Crp-like helix-turn-helix domain PF575_12155 PF00248 Aldo/keto reductase family PF575_12170 PF00709 Adenylosuccinate synthetase PF575_12175 PF13393 Histidyl-tRNA synthetase PF575_12185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PF575_12185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PF575_12190 PF02272 DHHA1 domain PF575_12190 PF01411 tRNA synthetases class II (A) PF575_12190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PF575_12195 PF01842 ACT domain PF575_12195 PF00696 Amino acid kinase family PF575_12195 PF13840 ACT domain PF575_12200 PF02599 Global regulator protein family PF575_12205 PF01351 Ribonuclease HII PF575_12215 PF01292 Prokaryotic cytochrome b561 PF575_12220 PF00962 Adenosine/AMP deaminase PF575_12225 PF00860 Permease family PF575_12235 PF00743 Flavin-binding monooxygenase-like PF575_12240 PF00106 short chain dehydrogenase PF575_12250 PF17954 Quercetinase C-terminal cupin domain PF575_12250 PF02678 Pirin PF575_12255 PF00440 Bacterial regulatory proteins, tetR family PF575_12255 PF17932 Tetracyclin repressor-like, C-terminal domain PF575_12265 PF00106 short chain dehydrogenase PF575_12270 PF00743 Flavin-binding monooxygenase-like PF575_12275 PF04072 Leucine carboxyl methyltransferase PF575_12280 PF12833 Helix-turn-helix domain PF575_12280 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF575_12285 PF00743 Flavin-binding monooxygenase-like PF575_12290 PF00106 short chain dehydrogenase PF575_12295 PF07859 alpha/beta hydrolase fold PF575_12300 PF05199 GMC oxidoreductase PF575_12305 PF03573 outer membrane porin, OprD family PF575_12310 PF07690 Major Facilitator Superfamily PF575_12315 PF00884 Sulfatase PF575_12320 PF03781 Sulfatase-modifying factor enzyme 1 PF575_12330 PF00355 Rieske [2Fe-2S] domain PF575_12335 PF00175 Oxidoreductase NAD-binding domain PF575_12335 PF00111 2Fe-2S iron-sulfur cluster binding domain PF575_12350 PF07690 Major Facilitator Superfamily PF575_12355 PF00378 Enoyl-CoA hydratase/isomerase PF575_12360 PF00171 Aldehyde dehydrogenase family PF575_12370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_12370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_12370 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_12375 PF03573 outer membrane porin, OprD family PF575_12390 PF07519 Tannase and feruloyl esterase PF575_12395 PF07729 FCD domain PF575_12395 PF00392 Bacterial regulatory proteins, gntR family PF575_12400 PF00171 Aldehyde dehydrogenase family PF575_12405 PF00701 Dihydrodipicolinate synthetase family PF575_12410 PF13378 Enolase C-terminal domain-like PF575_12415 PF07690 Major Facilitator Superfamily PF575_12420 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PF575_12420 PF08666 SAF domain PF575_12425 PF00892 EamA-like transporter family PF575_12430 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF575_12430 PF12833 Helix-turn-helix domain PF575_12435 PF00171 Aldehyde dehydrogenase family PF575_12440 PF00324 Amino acid permease PF575_12445 PF04958 Arginine N-succinyltransferase beta subunit PF575_12450 PF00202 Aminotransferase class-III PF575_12460 PF00171 Aldehyde dehydrogenase family PF575_12470 PF07729 FCD domain PF575_12470 PF00392 Bacterial regulatory proteins, gntR family PF575_12480 PF00324 Amino acid permease PF575_12485 PF01266 FAD dependent oxidoreductase PF575_12490 PF00324 Amino acid permease PF575_12500 PF05643 Putative bacterial lipoprotein (DUF799) PF575_12510 PF03783 Curli production assembly/transport component CsgG PF575_12535 PF05987 Bacterial protein of unknown function (DUF898) PF575_12550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF575_12550 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_12555 PF00764 Arginosuccinate synthase PF575_12575 PF01979 Amidohydrolase family PF575_12580 PF00929 Exonuclease PF575_12590 PF00593 TonB dependent receptor PF575_12590 PF07715 TonB-dependent Receptor Plug Domain PF575_12595 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_12595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF575_12600 PF00005 ABC transporter PF575_12600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PF575_12605 PF00528 Binding-protein-dependent transport system inner membrane component PF575_12605 PF12911 N-terminal TM domain of oligopeptide transport permease C PF575_12610 PF00528 Binding-protein-dependent transport system inner membrane component PF575_12615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PF575_12620 PF01464 Transglycosylase SLT domain PF575_12620 PF01476 LysM domain PF575_12620 PF01464 Transglycosylase SLT domain PF575_12620 PF01476 LysM domain PF575_12625 PF00929 Exonuclease PF575_12635 PF00293 NUDIX domain PF575_12635 PF09297 NADH pyrophosphatase zinc ribbon domain PF575_12645 PF04972 BON domain PF575_12650 PF02021 Uncharacterised protein family UPF0102 PF575_12655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PF575_12665 PF03466 LysR substrate binding domain PF575_12665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_12670 PF01810 LysE type translocator PF575_12680 PF13411 MerR HTH family regulatory protein PF575_12690 PF01494 FAD binding domain PF575_12695 PF01494 FAD binding domain PF575_12700 PF00557 Metallopeptidase family M24 PF575_12700 PF05195 Aminopeptidase P, N-terminal domain PF575_12735 PF00884 Sulfatase PF575_12735 PF08019 Phosphoethanolamine transferase EptA/EptB PF575_12790 PF01551 Peptidase family M23 PF575_12790 PF01464 Transglycosylase SLT domain PF575_12790 PF10145 Phage-related minor tail protein PF575_12965 PF10548 P22AR C-terminal domain PF575_12965 PF02498 BRO family, N-terminal domain PF575_13120 PF00117 Glutamine amidotransferase class-I PF575_13125 PF11838 ERAP1-like C-terminal domain PF575_13125 PF01433 Peptidase family M1 domain PF575_13130 PF00593 TonB dependent receptor PF575_13130 PF07715 TonB-dependent Receptor Plug Domain PF575_13135 PF00591 Glycosyl transferase family, a/b domain PF575_13135 PF02885 Glycosyl transferase family, helical bundle domain PF575_13140 PF00218 Indole-3-glycerol phosphate synthase PF575_13155 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PF575_13155 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PF575_13160 PF01799 [2Fe-2S] binding domain PF575_13160 PF00111 2Fe-2S iron-sulfur cluster binding domain PF575_13165 PF01227 GTP cyclohydrolase I PF575_13175 PF00144 Beta-lactamase PF575_13185 PF13005 zinc-finger binding domain of transposase IS66 PF575_13185 PF13007 Transposase C of IS166 homeodomain PF575_13185 PF13817 IS66 C-terminal element PF575_13185 PF03050 Transposase IS66 family PF575_13210 PF05675 Protein of unknown function (DUF817) PF575_13215 PF01208 Uroporphyrinogen decarboxylase (URO-D) PF575_13225 PF00425 chorismate binding enzyme PF575_13230 PF01648 4'-phosphopantetheinyl transferase superfamily PF575_13230 PF17837 4'-phosphopantetheinyl transferase N-terminal domain PF575_13235 PF00975 Thioesterase domain PF575_13240 PF00005 ABC transporter PF575_13245 PF00664 ABC transporter transmembrane region PF575_13245 PF00005 ABC transporter PF575_13250 PF00282 Pyridoxal-dependent decarboxylase conserved domain PF575_13255 PF00550 Phosphopantetheine attachment site PF575_13255 PF00857 Isochorismatase family PF575_13260 PF00501 AMP-binding enzyme PF575_13260 PF13193 AMP-binding enzyme C-terminal domain PF575_13265 PF00501 AMP-binding enzyme PF575_13265 PF00668 Condensation domain PF575_13265 PF00550 Phosphopantetheine attachment site PF575_13270 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PF575_13275 PF00593 TonB dependent receptor PF575_13275 PF07715 TonB-dependent Receptor Plug Domain PF575_13280 PF01497 Periplasmic binding protein PF575_13285 PF00005 ABC transporter PF575_13290 PF01032 FecCD transport family PF575_13295 PF01032 FecCD transport family PF575_13300 PF00668 Condensation domain PF575_13300 PF00975 Thioesterase domain PF575_13300 PF00550 Phosphopantetheine attachment site PF575_13300 PF13193 AMP-binding enzyme C-terminal domain PF575_13300 PF00501 AMP-binding enzyme PF575_13305 PF00550 Phosphopantetheine attachment site PF575_13305 PF13193 AMP-binding enzyme C-terminal domain PF575_13305 PF00501 AMP-binding enzyme PF575_13305 PF00668 Condensation domain PF575_13315 PF08348 YheO-like PAS domain PF575_13315 PF13309 HTH domain PF575_13320 PF00291 Pyridoxal-phosphate dependent enzyme PF575_13325 PF17954 Quercetinase C-terminal cupin domain PF575_13325 PF02678 Pirin PF575_13345 PF00440 Bacterial regulatory proteins, tetR family PF575_13355 PF13817 IS66 C-terminal element PF575_13355 PF13007 Transposase C of IS166 homeodomain PF575_13355 PF13005 zinc-finger binding domain of transposase IS66 PF575_13355 PF03050 Transposase IS66 family PF575_13375 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PF575_13375 PF13378 Enolase C-terminal domain-like PF575_13380 PF00083 Sugar (and other) transporter PF575_13385 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system PF575_13395 PF00892 EamA-like transporter family PF575_13415 PF01266 FAD dependent oxidoreductase PF575_13415 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PF575_13420 PF18113 Rubredoxin binding C-terminal domain PF575_13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_13430 PF00171 Aldehyde dehydrogenase family PF575_13435 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF575_13435 PF00355 Rieske [2Fe-2S] domain PF575_13440 PF02028 BCCT, betaine/carnitine/choline family transporter PF575_13445 PF00083 Sugar (and other) transporter PF575_13450 PF00557 Metallopeptidase family M24 PF575_13455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF575_13460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_13460 PF03466 LysR substrate binding domain PF575_13465 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF575_13465 PF12833 Helix-turn-helix domain PF575_13470 PF01370 NAD dependent epimerase/dehydratase family PF575_13480 PF00561 alpha/beta hydrolase fold PF575_13485 PF00743 Flavin-binding monooxygenase-like PF575_13495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_13495 PF03466 LysR substrate binding domain PF575_13500 PF00857 Isochorismatase family PF575_13550 PF04328 Selenoprotein, putative PF575_13555 PF13722 5TM C-terminal transporter carbon starvation CstA PF575_13555 PF02554 Carbon starvation protein CstA PF575_13560 PF01132 Elongation factor P (EF-P) OB domain PF575_13560 PF08207 Elongation factor P (EF-P) KOW-like domain PF575_13560 PF09285 Elongation factor P, C-terminal PF575_13565 PF04055 Radical SAM superfamily PF575_13575 PF12792 CSS motif domain associated with EAL PF575_13575 PF00563 EAL domain PF575_13580 PF01197 Ribosomal protein L31 PF575_13585 PF13593 SBF-like CPA transporter family (DUF4137) PF575_13590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF575_13595 PF07690 Major Facilitator Superfamily PF575_13600 PF13654 AAA domain PF575_13600 PF05362 Lon protease (S16) C-terminal proteolytic domain PF575_13605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_13605 PF03466 LysR substrate binding domain PF575_13610 PF01476 LysM domain PF575_13610 PF01551 Peptidase family M23 PF575_13615 PF01975 Survival protein SurE PF575_13630 PF07943 Penicillin-binding protein 5, C-terminal domain PF575_13630 PF00768 D-alanyl-D-alanine carboxypeptidase PF575_13635 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_13640 PF13344 Haloacid dehalogenase-like hydrolase PF575_13640 PF00293 NUDIX domain PF575_13650 PF04356 Protein of unknown function (DUF489) PF575_13655 PF00206 Lyase PF575_13655 PF08328 Adenylosuccinate lyase C-terminal PF575_13670 PF01343 Peptidase family S49 PF575_13670 PF08496 Peptidase family S49 N-terminal PF575_13675 PF00005 ABC transporter PF575_13680 PF00528 Binding-protein-dependent transport system inner membrane component PF575_13685 PF00528 Binding-protein-dependent transport system inner membrane component PF575_13690 PF12849 PBP superfamily domain PF575_13695 PF00324 Amino acid permease PF575_13700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PF575_13700 PF00205 Thiamine pyrophosphate enzyme, central domain PF575_13700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PF575_13705 PF01037 Lrp/AsnC ligand binding domain PF575_13710 PF00171 Aldehyde dehydrogenase family PF575_13715 PF00282 Pyridoxal-dependent decarboxylase conserved domain PF575_13720 PF00202 Aminotransferase class-III PF575_13735 PF02525 Flavodoxin-like fold PF575_13740 PF00487 Fatty acid desaturase PF575_13745 PF00175 Oxidoreductase NAD-binding domain PF575_13745 PF00111 2Fe-2S iron-sulfur cluster binding domain PF575_13745 PF00970 Oxidoreductase FAD-binding domain PF575_13750 PF00440 Bacterial regulatory proteins, tetR family PF575_13760 PF18339 RapA N-terminal Tudor like domain 1 PF575_13760 PF18337 RapA N-terminal Tudor like domain PF575_13760 PF00176 SNF2 family N-terminal domain PF575_13760 PF12137 RNA polymerase recycling family C-terminal PF575_13760 PF00271 Helicase conserved C-terminal domain PF575_13765 PF00849 RNA pseudouridylate synthase PF575_13775 PF00202 Aminotransferase class-III PF575_13780 PF02581 Thiamine monophosphate synthase PF575_13800 PF13005 zinc-finger binding domain of transposase IS66 PF575_13800 PF03050 Transposase IS66 family PF575_13800 PF13007 Transposase C of IS166 homeodomain PF575_13800 PF13817 IS66 C-terminal element PF575_13825 PF00675 Insulinase (Peptidase family M16) PF575_13825 PF05193 Peptidase M16 inactive domain PF575_13830 PF02567 Phenazine biosynthesis-like protein PF575_13835 PF00375 Sodium:dicarboxylate symporter family PF575_13840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_13840 PF03466 LysR substrate binding domain PF575_13845 PF06779 Uncharacterised MFS-type transporter YbfB PF575_13865 PF00180 Isocitrate/isopropylmalate dehydrogenase PF575_13870 PF00849 RNA pseudouridylate synthase PF575_13875 PF03971 Monomeric isocitrate dehydrogenase PF575_13885 PF07943 Penicillin-binding protein 5, C-terminal domain PF575_13885 PF00768 D-alanyl-D-alanine carboxypeptidase PF575_13890 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_13895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF575_13900 PF03441 FAD binding domain of DNA photolyase PF575_13900 PF00875 DNA photolyase PF575_13930 PF02350 UDP-N-acetylglucosamine 2-epimerase PF575_13945 PF03060 Nitronate monooxygenase PF575_13950 PF01207 Dihydrouridine synthase (Dus) PF575_13955 PF07759 Protein of unknown function (DUF1615) PF575_13965 PF00696 Amino acid kinase family PF575_13965 PF01472 PUA domain PF575_13970 PF01018 GTP1/OBG PF575_13970 PF01926 50S ribosome-binding GTPase PF575_13985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PF575_13985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PF575_13990 PF00892 EamA-like transporter family PF575_14000 PF00271 Helicase conserved C-terminal domain PF575_14000 PF04851 Type III restriction enzyme, res subunit PF575_14000 PF02151 UvrB/uvrC motif PF575_14000 PF12344 Ultra-violet resistance protein B PF575_14000 PF17757 UvrB interaction domain PF575_14010 PF17151 Periplasmic sensor domain PF575_14010 PF00990 Diguanylate cyclase, GGDEF domain PF575_14020 PF00155 Aminotransferase class I and II PF575_14030 PF00012 Hsp70 protein PF575_14060 PF00106 short chain dehydrogenase PF575_14065 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) PF575_14070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PF575_14075 PF02565 Recombination protein O C terminal PF575_14075 PF11967 Recombination protein O N terminal PF575_14085 PF07650 KH domain PF575_14085 PF01926 50S ribosome-binding GTPase PF575_14090 PF00035 Double-stranded RNA binding motif PF575_14090 PF14622 Ribonuclease-III-like PF575_14100 PF10502 Signal peptidase, peptidase S26 PF575_14105 PF06421 GTP-binding protein LepA C-terminus PF575_14105 PF03144 Elongation factor Tu domain 2 PF575_14105 PF00009 Elongation factor Tu GTP binding domain PF575_14105 PF00679 Elongation factor G C-terminus PF575_14115 PF13180 PDZ domain PF575_14120 PF00890 FAD binding domain PF575_14120 PF02910 Fumarate reductase flavoprotein C-term PF575_14130 PF02223 Thymidylate kinase PF575_14135 PF02618 YceG-like family PF575_14140 PF01063 Amino-transferase class IV PF575_14155 PF00528 Binding-protein-dependent transport system inner membrane component PF575_14160 PF00528 Binding-protein-dependent transport system inner membrane component PF575_14165 PF00005 ABC transporter PF575_14165 PF12857 TOBE-like domain PF575_14170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_14170 PF03466 LysR substrate binding domain PF575_14180 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal PF575_14180 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_14180 PF14602 Hexapeptide repeat of succinyl-transferase PF575_14190 PF06508 Queuosine biosynthesis protein QueC PF575_14205 PF00578 AhpC/TSA family PF575_14215 PF01467 Cytidylyltransferase-like PF575_14215 PF00293 NUDIX domain PF575_14220 PF00378 Enoyl-CoA hydratase/isomerase PF575_14225 PF01784 NIF3 (NGG1p interacting factor 3) PF575_14235 PF07690 Major Facilitator Superfamily PF575_14240 PF02769 AIR synthase related protein, C-terminal domain PF575_14240 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PF575_14240 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PF575_14245 PF01966 HD domain PF575_14250 PF01330 RuvA N terminal domain PF575_14250 PF07499 RuvA, C-terminal domain PF575_14255 PF17864 RuvB AAA lid domain PF575_14255 PF05491 RuvB C-terminal winged helix domain PF575_14255 PF05496 Holliday junction DNA helicase RuvB P-loop domain PF575_14260 PF01546 Peptidase family M20/M25/M40 PF575_14260 PF07687 Peptidase dimerisation domain PF575_14265 PF03061 Thioesterase superfamily PF575_14270 PF01618 MotA/TolQ/ExbB proton channel family PF575_14275 PF02472 Biopolymer transport protein ExbD/TolR PF575_14285 PF07676 WD40-like Beta Propeller Repeat PF575_14285 PF04052 TolB amino-terminal domain PF575_14290 PF00691 OmpA family PF575_14300 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PF575_14305 PF00588 SpoU rRNA Methylase family PF575_14305 PF08032 RNA 2'-O ribose methyltransferase substrate binding PF575_14335 PF03050 Transposase IS66 family PF575_14335 PF13007 Transposase C of IS166 homeodomain PF575_14335 PF13005 zinc-finger binding domain of transposase IS66 PF575_14335 PF13817 IS66 C-terminal element PF575_14350 PF11638 DnaA N-terminal domain PF575_14350 PF08299 Bacterial dnaA protein helix-turn-helix PF575_14350 PF00308 Bacterial dnaA protein PF575_14355 PF01594 AI-2E family transporter PF575_14360 PF00586 AIR synthase related protein, N-terminal domain PF575_14360 PF02769 AIR synthase related protein, C-terminal domain PF575_14365 PF00551 Formyl transferase PF575_14370 PF12697 Alpha/beta hydrolase family PF575_14375 PF06965 Na+/H+ antiporter 1 PF575_14375 PF01343 Peptidase family S49 PF575_14385 PF03772 Competence protein PF575_14385 PF13567 Domain of unknown function (DUF4131) PF575_14385 PF00753 Metallo-beta-lactamase superfamily PF575_14390 PF00005 ABC transporter PF575_14395 PF12704 MacB-like periplasmic core domain PF575_14395 PF02687 FtsX-like permease family PF575_14405 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PF575_14420 PF00266 Aminotransferase class-V PF575_14430 PF13533 Biotin-lipoyl like PF575_14450 PF00535 Glycosyl transferase family 2 PF575_14465 PF03989 DNA gyrase C-terminal domain, beta-propeller PF575_14465 PF00521 DNA gyrase/topoisomerase IV, subunit A PF575_14470 PF01012 Electron transfer flavoprotein domain PF575_14470 PF00766 Electron transfer flavoprotein FAD-binding domain PF575_14475 PF01012 Electron transfer flavoprotein domain PF575_14480 PF00589 Phage integrase family PF575_14480 PF02899 Phage integrase, N-terminal SAM-like domain PF575_14485 PF01810 LysE type translocator PF575_14490 PF01678 Diaminopimelate epimerase PF575_14495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PF575_14495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PF575_14505 PF00324 Amino acid permease PF575_14510 PF18073 Rubredoxin metal binding domain PF575_14520 PF00152 tRNA synthetases class II (D, K and N) PF575_14525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF575_14525 PF11890 Domain of unknown function (DUF3410) PF575_14525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF575_14530 PF06803 Protein of unknown function (DUF1232) PF575_14535 PF02634 FdhD/NarQ family PF575_14540 PF00384 Molybdopterin oxidoreductase PF575_14545 PF02595 Glycerate kinase family PF575_14560 PF00881 Nitroreductase family PF575_14580 PF09857 Putative toxin of bacterial toxin-antitoxin pair PF575_14605 PF01272 Transcription elongation factor, GreA/GreB, C-term PF575_14605 PF03449 Transcription elongation factor, N-terminal PF575_14610 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF575_14610 PF01464 Transglycosylase SLT domain PF575_14620 PF01171 PP-loop family PF575_14625 PF01464 Transglycosylase SLT domain PF575_14630 PF01435 Peptidase family M48 PF575_14640 PF00873 AcrB/AcrD/AcrF family PF575_14645 PF03009 Glycerophosphoryl diester phosphodiesterase family PF575_14650 PF00753 Metallo-beta-lactamase superfamily PF575_14655 PF01219 Prokaryotic diacylglycerol kinase PF575_14660 PF00118 TCP-1/cpn60 chaperonin family PF575_14665 PF00166 Chaperonin 10 Kd subunit PF575_14675 PF00149 Calcineurin-like phosphoesterase PF575_14680 PF00781 Diacylglycerol kinase catalytic domain PF575_14685 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain PF575_14685 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain PF575_14690 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PF575_14690 PF01266 FAD dependent oxidoreductase PF575_14695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PF575_14695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PF575_14700 PF00083 Sugar (and other) transporter PF575_14715 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PF575_14715 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PF575_14730 PF09423 PhoD-like phosphatase PF575_14730 PF16655 PhoD-like phosphatase, N-terminal domain PF575_14750 PF00809 Pterin binding enzyme PF575_14755 PF06480 FtsH Extracellular PF575_14755 PF01434 Peptidase family M41 PF575_14755 PF17862 AAA+ lid domain PF575_14755 PF00004 ATPase family associated with various cellular activities (AAA) PF575_14760 PF01728 FtsJ-like methyltransferase PF575_14765 PF01985 CRS1 / YhbY (CRM) domain PF575_14780 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PF575_14780 PF00117 Glutamine amidotransferase class-I PF575_14785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF575_14785 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PF575_14785 PF02142 MGS-like domain PF575_14790 PF01272 Transcription elongation factor, GreA/GreB, C-term PF575_14790 PF03449 Transcription elongation factor, N-terminal PF575_14795 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_14800 PF00582 Universal stress protein family PF575_14805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PF575_14815 PF09587 Bacterial capsule synthesis protein PGA_cap PF575_14830 PF00999 Sodium/hydrogen exchanger family PF575_14835 PF04228 Putative neutral zinc metallopeptidase PF575_14840 PF05661 Protein of unknown function (DUF808) PF575_14845 PF00579 tRNA synthetases class I (W and Y) PF575_14850 PF02629 CoA binding domain PF575_14850 PF00549 CoA-ligase PF575_14855 PF08442 ATP-grasp domain PF575_14855 PF00549 CoA-ligase PF575_14860 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_14860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF575_14865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PF575_14865 PF00364 Biotin-requiring enzyme PF575_14865 PF02817 e3 binding domain PF575_14870 PF16078 2-oxoglutarate dehydrogenase N-terminus PF575_14870 PF00676 Dehydrogenase E1 component PF575_14870 PF16870 2-oxoglutarate dehydrogenase C-terminal PF575_14870 PF02779 Transketolase, pyrimidine binding domain PF575_14885 PF13085 2Fe-2S iron-sulfur cluster binding domain PF575_14890 PF00890 FAD binding domain PF575_14890 PF02910 Fumarate reductase flavoprotein C-term PF575_14895 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PF575_14900 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PF575_14905 PF00285 Citrate synthase, C-terminal domain PF575_14915 PF00581 Rhodanese-like domain PF575_14915 PF17773 UPF0176 acylphosphatase like domain PF575_14935 PF00140 Sigma-70 factor, region 1.2 PF575_14935 PF04546 Sigma-70, non-essential region PF575_14935 PF03979 Sigma-70 factor, region 1.1 PF575_14935 PF04542 Sigma-70 region 2 PF575_14935 PF04539 Sigma-70 region 3 PF575_14935 PF04545 Sigma-70, region 4 PF575_14940 PF04359 Protein of unknown function (DUF493) PF575_14945 PF03099 Biotin/lipoate A/B protein ligase family PF575_14955 PF00465 Iron-containing alcohol dehydrogenase PF575_14960 PF13520 Amino acid permease PF575_14965 PF03358 NADPH-dependent FMN reductase PF575_14970 PF01638 HxlR-like helix-turn-helix PF575_14975 PF00588 SpoU rRNA Methylase family PF575_14980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PF575_14980 PF14824 Sirohaem biosynthesis protein central PF575_14980 PF10414 Sirohaem synthase dimerisation region PF575_14985 PF02403 Seryl-tRNA synthetase N-terminal domain PF575_14985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PF575_14995 PF03548 Outer membrane lipoprotein carrier protein LolA PF575_15000 PF01016 Ribosomal L27 protein PF575_15005 PF00829 Ribosomal prokaryotic L21 protein PF575_15015 PF00348 Polyprenyl synthetase PF575_15025 PF01569 PAP2 superfamily PF575_15030 PF00529 HlyD membrane-fusion protein of T1SS PF575_15030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF575_15035 PF00873 AcrB/AcrD/AcrF family PF575_15040 PF02321 Outer membrane efflux protein PF575_15045 PF01906 Putative heavy-metal-binding PF575_15050 PF01906 Putative heavy-metal-binding PF575_15070 PF00133 tRNA synthetases class I (I, L, M and V) PF575_15070 PF08264 Anticodon-binding domain of tRNA PF575_15070 PF10458 Valyl tRNA synthetase tRNA binding arm PF575_15075 PF13649 Methyltransferase domain PF575_15090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_15090 PF03466 LysR substrate binding domain PF575_15095 PF00909 Ammonium Transporter Family PF575_15105 PF08521 Two-component sensor kinase N-terminal PF575_15105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_15105 PF00512 His Kinase A (phospho-acceptor) domain PF575_15110 PF00072 Response regulator receiver domain PF575_15110 PF00486 Transcriptional regulatory protein, C terminal PF575_15130 PF13005 zinc-finger binding domain of transposase IS66 PF575_15130 PF13007 Transposase C of IS166 homeodomain PF575_15130 PF13817 IS66 C-terminal element PF575_15130 PF03050 Transposase IS66 family PF575_15145 PF13817 IS66 C-terminal element PF575_15145 PF13007 Transposase C of IS166 homeodomain PF575_15145 PF13005 zinc-finger binding domain of transposase IS66 PF575_15145 PF03050 Transposase IS66 family PF575_15170 PF01734 Patatin-like phospholipase PF575_15180 PF01145 SPFH domain / Band 7 family PF575_15185 PF04237 YjbR PF575_15190 PF00348 Polyprenyl synthetase PF575_15195 PF04303 PrpF protein PF575_15200 PF00324 Amino acid permease PF575_15235 PF01965 DJ-1/PfpI family PF575_15240 PF02801 Beta-ketoacyl synthase, C-terminal domain PF575_15240 PF08659 KR domain PF575_15240 PF16197 Ketoacyl-synthetase C-terminal extension PF575_15240 PF00109 Beta-ketoacyl synthase, N-terminal domain PF575_15240 PF09277 Erythronolide synthase, docking PF575_15240 PF08990 Erythronolide synthase docking PF575_15240 PF08240 Alcohol dehydrogenase GroES-like domain PF575_15240 PF00698 Acyl transferase domain PF575_15240 PF14765 Polyketide synthase dehydratase PF575_15240 PF00550 Phosphopantetheine attachment site PF575_15245 PF06719 AraC-type transcriptional regulator N-terminus PF575_15245 PF12833 Helix-turn-helix domain PF575_15250 PF02673 Bacitracin resistance protein BacA PF575_15270 PF02525 Flavodoxin-like fold PF575_15285 PF01507 Phosphoadenosine phosphosulfate reductase family PF575_15290 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain PF575_15290 PF06974 Protein of unknown function (DUF1298) PF575_15300 PF10150 Ribonuclease E/G family PF575_15300 PF00575 S1 RNA binding domain PF575_15305 PF02545 Maf-like protein PF575_15310 PF04093 rod shape-determining protein MreD PF575_15315 PF04085 rod shape-determining protein MreC PF575_15325 PF02686 Glu-tRNAGln amidotransferase C subunit PF575_15330 PF01425 Amidase PF575_15335 PF02934 GatB/GatE catalytic domain PF575_15335 PF02637 GatB domain PF575_15360 PF05992 SbmA/BacA-like family PF575_15365 PF00291 Pyridoxal-phosphate dependent enzyme PF575_15365 PF13291 ACT domain PF575_15370 PF01734 Patatin-like phospholipase PF575_15375 PF01235 Sodium:alanine symporter family PF575_15390 PF00881 Nitroreductase family PF575_15395 PF07690 Major Facilitator Superfamily PF575_15400 PF12805 FUSC-like inner membrane protein yccS PF575_15410 PF00667 FAD binding domain PF575_15410 PF00258 Flavodoxin PF575_15410 PF00175 Oxidoreductase NAD-binding domain PF575_15450 PF17969 L,D-transpeptidase C-terminal domain PF575_15450 PF03734 L,D-transpeptidase catalytic domain PF575_15455 PF04304 Protein of unknown function (DUF454) PF575_15465 PF08085 Entericidin EcnA/B family PF575_15470 PF07687 Peptidase dimerisation domain PF575_15470 PF01546 Peptidase family M20/M25/M40 PF575_15480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_15480 PF00072 Response regulator receiver domain PF575_15480 PF01584 CheW-like domain PF575_15480 PF01627 Hpt domain PF575_15485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PF575_15485 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PF575_15490 PF01584 CheW-like domain PF575_15495 PF00072 Response regulator receiver domain PF575_15500 PF00072 Response regulator receiver domain PF575_15515 PF00873 AcrB/AcrD/AcrF family PF575_15520 PF03129 Anticodon binding domain PF575_15520 PF04073 Aminoacyl-tRNA editing domain PF575_15520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PF575_15525 PF07411 Domain of unknown function (DUF1508) PF575_15530 PF08274 PhnA Zinc-Ribbon PF575_15530 PF03831 PhnA domain PF575_15535 PF04343 Protein of unknown function, DUF488 PF575_15545 PF01571 Aminomethyltransferase folate-binding domain PF575_15550 PF10411 Disulfide bond isomerase protein N-terminus PF575_15550 PF13098 Thioredoxin-like domain PF575_15560 PF03547 Membrane transport protein PF575_15565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF575_15570 PF07715 TonB-dependent Receptor Plug Domain PF575_15570 PF00593 TonB dependent receptor PF575_15575 PF02245 Methylpurine-DNA glycosylase (MPG) PF575_15580 PF06827 Zinc finger found in FPG and IleRS PF575_15580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PF575_15580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PF575_15595 PF01741 Large-conductance mechanosensitive channel, MscL PF575_15600 PF00679 Elongation factor G C-terminus PF575_15600 PF00009 Elongation factor Tu GTP binding domain PF575_15600 PF03144 Elongation factor Tu domain 2 PF575_15605 PF00860 Permease family PF575_15610 PF05175 Methyltransferase small domain PF575_15610 PF08468 Methyltransferase small domain N-terminal PF575_15615 PF00324 Amino acid permease PF575_15620 PF01139 tRNA-splicing ligase RtcB PF575_15630 PF00691 OmpA family PF575_15630 PF13505 Outer membrane protein beta-barrel domain PF575_15640 PF02803 Thiolase, C-terminal domain PF575_15640 PF00108 Thiolase, N-terminal domain PF575_15650 PF00893 Small Multidrug Resistance protein PF575_15660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PF575_15660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PF575_15665 PF01011 PQQ enzyme repeat PF575_15670 PF04966 Carbohydrate-selective porin, OprB family PF575_15675 PF02515 CoA-transferase family III PF575_15680 PF02311 AraC-like ligand binding domain PF575_15680 PF12833 Helix-turn-helix domain PF575_15685 PF00108 Thiolase, N-terminal domain PF575_15685 PF02803 Thiolase, C-terminal domain PF575_15690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF575_15690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF575_15690 PF00378 Enoyl-CoA hydratase/isomerase PF575_15715 PF03006 Haemolysin-III related PF575_15720 PF07690 Major Facilitator Superfamily PF575_15720 PF00083 Sugar (and other) transporter PF575_15730 PF02810 SEC-C motif PF575_15730 PF07517 SecA DEAD-like domain PF575_15730 PF01043 SecA preprotein cross-linking domain PF575_15730 PF07516 SecA Wing and Scaffold domain PF575_15735 PF10417 C-terminal domain of 1-Cys peroxiredoxin PF575_15735 PF00578 AhpC/TSA family PF575_15740 PF00753 Metallo-beta-lactamase superfamily PF575_15755 PF08245 Mur ligase middle domain PF575_15755 PF02875 Mur ligase family, glutamate ligase domain PF575_15760 PF01039 Carboxyl transferase domain PF575_15765 PF00290 Tryptophan synthase alpha chain PF575_15790 PF00291 Pyridoxal-phosphate dependent enzyme PF575_15795 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PF575_15800 PF00593 TonB dependent receptor PF575_15800 PF07715 TonB-dependent Receptor Plug Domain PF575_15805 PF01923 Cobalamin adenosyltransferase PF575_15825 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PF575_15830 PF00072 Response regulator receiver domain PF575_15830 PF00486 Transcriptional regulatory protein, C terminal PF575_15835 PF00512 His Kinase A (phospho-acceptor) domain PF575_15835 PF00672 HAMP domain PF575_15835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_15845 PF12806 Acetyl-CoA dehydrogenase C-terminal like PF575_15845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_15845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_15845 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_15850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_15850 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_15850 PF12806 Acetyl-CoA dehydrogenase C-terminal like PF575_15850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_15855 PF06146 Phosphate-starvation-inducible E PF575_15875 PF00593 TonB dependent receptor PF575_15875 PF07715 TonB-dependent Receptor Plug Domain PF575_15885 PF00152 tRNA synthetases class II (D, K and N) PF575_15885 PF01336 OB-fold nucleic acid binding domain PF575_15885 PF02938 GAD domain PF575_15890 PF17101 Stealth protein CR1, conserved region 1 PF575_15890 PF11380 Stealth protein CR2, conserved region 2 PF575_15890 PF17102 Stealth protein CR3, conserved region 3 PF575_15915 PF13439 Glycosyltransferase Family 4 PF575_15915 PF00534 Glycosyl transferases group 1 PF575_15920 PF00535 Glycosyl transferase family 2 PF575_15925 PF01522 Polysaccharide deacetylase PF575_15940 PF01063 Amino-transferase class IV PF575_15945 PF03710 Glutamate-ammonia ligase adenylyltransferase PF575_15945 PF08335 GlnD PII-uridylyltransferase PF575_15950 PF00512 His Kinase A (phospho-acceptor) domain PF575_15950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_15950 PF07689 KaiB domain PF575_15960 PF02547 Queuosine biosynthesis protein PF575_15975 PF01702 Queuine tRNA-ribosyltransferase PF575_15980 PF02699 Preprotein translocase subunit PF575_15985 PF07549 SecD/SecF GG Motif PF575_15985 PF13721 SecD export protein N-terminal TM region PF575_15985 PF02355 Protein export membrane protein PF575_15990 PF07549 SecD/SecF GG Motif PF575_15990 PF02355 Protein export membrane protein PF575_15995 PF04127 DNA / pantothenate metabolism flavoprotein PF575_15995 PF02441 Flavoprotein PF575_16000 PF04002 RadC-like JAB domain PF575_16005 PF01062 Bestrophin, RFP-TM, chloride channel PF575_16010 PF02811 PHP domain PF575_16015 PF04279 Intracellular septation protein A PF575_16020 PF03795 YCII-related domain PF575_16030 PF01266 FAD dependent oxidoreductase PF575_16030 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PF575_16040 PF04461 Protein of unknown function (DUF520) PF575_16050 PF03061 Thioesterase superfamily PF575_16055 PF00085 Thioredoxin PF575_16060 PF00561 alpha/beta hydrolase fold PF575_16065 PF04273 Putative phosphatase (DUF442) PF575_16065 PF00753 Metallo-beta-lactamase superfamily PF575_16075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF575_16075 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_16110 PF17152 Periplasmic sensor domain PF575_16110 PF00990 Diguanylate cyclase, GGDEF domain PF575_16115 PF00691 OmpA family PF575_16115 PF01389 OmpA-like transmembrane domain PF575_16120 PF10518 TAT (twin-arginine translocation) pathway signal sequence PF575_16120 PF00149 Calcineurin-like phosphoesterase PF575_16125 PF13091 PLD-like domain PF575_16135 PF16360 GTP-binding GTPase Middle Region PF575_16135 PF13167 GTP-binding GTPase N-terminal PF575_16135 PF01926 50S ribosome-binding GTPase PF575_16155 PF00149 Calcineurin-like phosphoesterase PF575_16160 PF00398 Ribosomal RNA adenine dimethylase PF575_16165 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PF575_16170 PF00572 Ribosomal protein L13 PF575_16175 PF00380 Ribosomal protein S9/S16 PF575_16180 PF13417 Glutathione S-transferase, N-terminal domain PF575_16180 PF00043 Glutathione S-transferase, C-terminal domain PF575_16185 PF04386 Stringent starvation protein B PF575_16195 PF00364 Biotin-requiring enzyme PF575_16195 PF00289 Biotin carboxylase, N-terminal domain PF575_16195 PF02785 Biotin carboxylase C-terminal domain PF575_16195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF575_16205 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_16205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_16205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_16210 PF01039 Carboxyl transferase domain PF575_16225 PF17932 Tetracyclin repressor-like, C-terminal domain PF575_16225 PF00440 Bacterial regulatory proteins, tetR family PF575_16230 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_16230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_16230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_16275 PF01066 CDP-alcohol phosphatidyltransferase PF575_16280 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PF575_16300 PF00056 lactate/malate dehydrogenase, NAD binding domain PF575_16300 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PF575_16310 PF01551 Peptidase family M23 PF575_16310 PF10145 Phage-related minor tail protein PF575_16310 PF01464 Transglycosylase SLT domain PF575_16315 PF04055 Radical SAM superfamily PF575_16315 PF01938 TRAM domain PF575_16315 PF00919 Uncharacterized protein family UPF0004 PF575_16320 PF02562 PhoH-like protein PF575_16325 PF02130 Uncharacterized protein family UPF0054 PF575_16350 PF03358 NADPH-dependent FMN reductase PF575_16355 PF03631 Virulence factor BrkB PF575_16360 PF00892 EamA-like transporter family PF575_16365 PF12833 Helix-turn-helix domain PF575_16370 PF01557 Fumarylacetoacetate (FAA) hydrolase family PF575_16415 PF17876 Cold shock domain PF575_16415 PF08461 Ribonuclease R winged-helix domain PF575_16415 PF08206 Ribonuclease B OB domain PF575_16415 PF00575 S1 RNA binding domain PF575_16415 PF00773 RNB domain PF575_16420 PF01432 Peptidase family M3 PF575_16425 PF09526 Probable metal-binding protein (DUF2387) PF575_16455 PF03937 Flavinator of succinate dehydrogenase PF575_16460 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_16460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_16460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_16465 PF00743 Flavin-binding monooxygenase-like PF575_16470 PF01196 Ribosomal protein L17 PF575_16475 PF01000 RNA polymerase Rpb3/RpoA insert domain PF575_16475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PF575_16475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PF575_16480 PF00163 Ribosomal protein S4/S9 N-terminal domain PF575_16480 PF01479 S4 domain PF575_16485 PF00411 Ribosomal protein S11 PF575_16490 PF00416 Ribosomal protein S13/S18 PF575_16495 PF00444 Ribosomal protein L36 PF575_16500 PF00344 SecY translocase PF575_16505 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PF575_16510 PF00327 Ribosomal protein L30p/L7e PF575_16515 PF03719 Ribosomal protein S5, C-terminal domain PF575_16515 PF00333 Ribosomal protein S5, N-terminal domain PF575_16520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PF575_16525 PF00347 Ribosomal protein L6 PF575_16530 PF00410 Ribosomal protein S8 PF575_16535 PF00253 Ribosomal protein S14p/S29e PF575_16540 PF00673 ribosomal L5P family C-terminus PF575_16540 PF00281 Ribosomal protein L5 PF575_16545 PF00467 KOW motif PF575_16545 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PF575_16550 PF00238 Ribosomal protein L14p/L23e PF575_16555 PF00366 Ribosomal protein S17 PF575_16560 PF00831 Ribosomal L29 protein PF575_16565 PF00252 Ribosomal protein L16p/L10e PF575_16575 PF00237 Ribosomal protein L22p/L17e PF575_16580 PF00203 Ribosomal protein S19 PF575_16585 PF03947 Ribosomal Proteins L2, C-terminal domain PF575_16585 PF00181 Ribosomal Proteins L2, RNA binding domain PF575_16590 PF00276 Ribosomal protein L23 PF575_16595 PF00573 Ribosomal protein L4/L1 family PF575_16600 PF00297 Ribosomal protein L3 PF575_16605 PF00338 Ribosomal protein S10p/S20e PF575_16610 PF00117 Glutamine amidotransferase class-I PF575_16615 PF01053 Cys/Met metabolism PLP-dependent enzyme PF575_16620 PF05872 Bacterial protein of unknown function (DUF853) PF575_16630 PF00970 Oxidoreductase FAD-binding domain PF575_16630 PF00042 Globin PF575_16630 PF00175 Oxidoreductase NAD-binding domain PF575_16635 PF02082 Transcriptional regulator PF575_16640 PF01926 50S ribosome-binding GTPase PF575_16650 PF00375 Sodium:dicarboxylate symporter family PF575_16660 PF01553 Acyltransferase PF575_16675 PF00270 DEAD/DEAH box helicase PF575_16675 PF17191 RecG wedge domain PF575_16675 PF00271 Helicase conserved C-terminal domain PF575_16680 PF00156 Phosphoribosyl transferase domain PF575_16685 PF00293 NUDIX domain PF575_16690 PF03641 Possible lysine decarboxylase PF575_16695 PF01544 CorA-like Mg2+ transporter protein PF575_16705 PF05494 MlaC protein PF575_16715 PF02405 Permease MlaE PF575_16720 PF00005 ABC transporter PF575_16730 PF03880 DbpA RNA binding domain PF575_16730 PF00270 DEAD/DEAH box helicase PF575_16730 PF12343 Cold shock protein DEAD box A PF575_16730 PF00271 Helicase conserved C-terminal domain PF575_16735 PF00459 Inositol monophosphatase family PF575_16740 PF02780 Transketolase, C-terminal domain PF575_16740 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PF575_16740 PF02779 Transketolase, pyrimidine binding domain PF575_16745 PF00925 GTP cyclohydrolase II PF575_16750 PF01218 Coproporphyrinogen III oxidase PF575_16755 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PF575_16755 PF01488 Shikimate / quinate 5-dehydrogenase PF575_16755 PF08501 Shikimate dehydrogenase substrate binding domain PF575_16765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF575_16765 PF12806 Acetyl-CoA dehydrogenase C-terminal like PF575_16765 PF02770 Acyl-CoA dehydrogenase, middle domain PF575_16765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF575_16775 PF04024 PspC domain PF575_16780 PF00571 CBS domain PF575_16795 PF07690 Major Facilitator Superfamily PF575_16800 PF02091 Glycyl-tRNA synthetase alpha subunit PF575_16805 PF05746 DALR anticodon binding domain PF575_16805 PF02092 Glycyl-tRNA synthetase beta subunit PF575_16815 PF13737 Transposase DDE domain PF575_16835 PF00892 EamA-like transporter family PF575_16840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_16840 PF03466 LysR substrate binding domain PF575_16855 PF05922 Peptidase inhibitor I9 PF575_16855 PF00082 Subtilase family PF575_16870 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family PF575_16875 PF04996 Succinylarginine dihydrolase PF575_16880 PF00171 Aldehyde dehydrogenase family PF575_16885 PF04958 Arginine N-succinyltransferase beta subunit PF575_16890 PF00202 Aminotransferase class-III PF575_16895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PF575_16895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PF575_16900 PF00324 Amino acid permease PF575_16910 PF08241 Methyltransferase domain PF575_16930 PF13614 AAA domain PF575_16935 PF01594 AI-2E family transporter PF575_16940 PF00080 Copper/zinc superoxide dismutase (SODC) PF575_16945 PF12805 FUSC-like inner membrane protein yccS PF575_16950 PF07690 Major Facilitator Superfamily PF575_16960 PF02525 Flavodoxin-like fold PF575_16965 PF03992 Antibiotic biosynthesis monooxygenase PF575_16980 PF02913 FAD linked oxidases, C-terminal domain PF575_16980 PF01565 FAD binding domain PF575_16985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF575_16985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF575_16990 PF00892 EamA-like transporter family PF575_16995 PF00892 EamA-like transporter family PF575_17005 PF01925 Sulfite exporter TauE/SafE PF575_17010 PF01509 TruB family pseudouridylate synthase (N terminal domain) PF575_17010 PF16198 tRNA pseudouridylate synthase B C-terminal domain PF575_17010 PF09157 Pseudouridine synthase II TruB, C-terminal PF575_17015 PF03280 Proteobacterial lipase chaperone protein PF575_17020 PF00561 alpha/beta hydrolase fold PF575_17025 PF01245 Ribosomal protein L19 PF575_17030 PF01746 tRNA (Guanine-1)-methyltransferase PF575_17035 PF05239 PRC-barrel domain PF575_17035 PF01782 RimM N-terminal domain PF575_17040 PF00886 Ribosomal protein S16 PF575_17080 PF02401 LytB protein PF575_17085 PF00625 Guanylate kinase PF575_17090 PF01192 RNA polymerase Rpb6 PF575_17100 PF13291 ACT domain PF575_17100 PF04607 Region found in RelA / SpoT proteins PF575_17100 PF02824 TGS domain PF575_17105 PF01042 Endoribonuclease L-PSP PF575_17110 PF04324 BFD-like [2Fe-2S] binding domain PF575_17115 PF00210 Ferritin-like domain PF575_17120 PF15864 Protein glycosylation ligase PF575_17120 PF04932 O-Antigen ligase PF575_17120 PF11846 Virulence factor membrane-bound polymerase, C-terminal PF575_17130 PF07963 Prokaryotic N-terminal methylation motif PF575_17130 PF00114 Pilin (bacterial filament) PF575_17140 PF04536 TPM domain PF575_17145 PF04011 LemA family PF575_17155 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF575_17155 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PF575_17160 PF00310 Glutamine amidotransferases class-II PF575_17160 PF01493 GXGXG motif PF575_17160 PF01645 Conserved region in glutamate synthase PF575_17160 PF04898 Glutamate synthase central domain PF575_17170 PF01761 3-dehydroquinate synthase PF575_17175 PF01202 Shikimate kinase PF575_17180 PF03958 Bacterial type II/III secretion system short domain PF575_17180 PF00263 Bacterial type II and III secretion system protein PF575_17180 PF11741 AMIN domain PF575_17180 PF07660 Secretin and TonB N terminus short domain PF575_17190 PF04350 Pilus assembly protein, PilO PF575_17195 PF05137 Fimbrial assembly protein (PilN) PF575_17200 PF11104 Type IV pilus assembly protein PilM; PF575_17205 PF17092 Penicillin-binding protein OB-like domain PF575_17205 PF00912 Transglycosylase PF575_17205 PF00905 Penicillin binding protein transpeptidase domain PF575_17210 PF13847 Methyltransferase domain PF575_17220 PF00953 Glycosyl transferase family 4 PF575_17225 PF01225 Mur ligase family, catalytic domain PF575_17225 PF02875 Mur ligase family, glutamate ligase domain PF575_17225 PF08245 Mur ligase middle domain PF575_17230 PF01225 Mur ligase family, catalytic domain PF575_17230 PF02875 Mur ligase family, glutamate ligase domain PF575_17230 PF08245 Mur ligase middle domain PF575_17235 PF03717 Penicillin-binding Protein dimerisation domain PF575_17235 PF00905 Penicillin binding protein transpeptidase domain PF575_17245 PF01795 MraW methylase family PF575_17260 PF00749 tRNA synthetases class I (E and Q), catalytic domain PF575_17275 PF00324 Amino acid permease PF575_17305 PF01545 Cation efflux family PF575_17310 PF00873 AcrB/AcrD/AcrF family PF575_17315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF575_17315 PF00529 HlyD membrane-fusion protein of T1SS PF575_17340 PF00005 ABC transporter PF575_17340 PF12848 ABC transporter PF575_17345 PF01053 Cys/Met metabolism PLP-dependent enzyme PF575_17350 PF00106 short chain dehydrogenase PF575_17355 PF00916 Sulfate permease family PF575_17355 PF01740 STAS domain PF575_17360 PF16921 Tex protein YqgF-like domain PF575_17360 PF09371 Tex-like protein N-terminal domain PF575_17360 PF00575 S1 RNA binding domain PF575_17360 PF17674 HHH domain PF575_17365 PF00072 Response regulator receiver domain PF575_17365 PF00486 Transcriptional regulatory protein, C terminal PF575_17370 PF00672 HAMP domain PF575_17370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_17370 PF00512 His Kinase A (phospho-acceptor) domain PF575_17380 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PF575_17380 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PF575_17385 PF00583 Acetyltransferase (GNAT) family PF575_17405 PF00475 Imidazoleglycerol-phosphate dehydratase PF575_17410 PF00117 Glutamine amidotransferase class-I PF575_17425 PF00977 Histidine biosynthesis protein PF575_17460 PF01636 Phosphotransferase enzyme family PF575_17465 PF00977 Histidine biosynthesis protein PF575_17480 PF00230 Major intrinsic protein PF575_17505 PF02705 K+ potassium transporter PF575_17520 PF02525 Flavodoxin-like fold PF575_17525 PF01638 HxlR-like helix-turn-helix PF575_17550 PF12833 Helix-turn-helix domain PF575_17550 PF02311 AraC-like ligand binding domain PF575_17555 PF00248 Aldo/keto reductase family PF575_17575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_17575 PF03466 LysR substrate binding domain PF575_17580 PF07690 Major Facilitator Superfamily PF575_17600 PF01593 Flavin containing amine oxidoreductase PF575_17605 PF02678 Pirin PF575_17605 PF05726 Pirin C-terminal cupin domain PF575_17610 PF00857 Isochorismatase family PF575_17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_17620 PF00171 Aldehyde dehydrogenase family PF575_17625 PF00202 Aminotransferase class-III PF575_17630 PF00155 Aminotransferase class I and II PF575_17630 PF00392 Bacterial regulatory proteins, gntR family PF575_17635 PF00324 Amino acid permease PF575_17645 PF03591 AzlC protein PF575_17655 PF00436 Single-strand binding protein family PF575_17660 PF07690 Major Facilitator Superfamily PF575_17670 PF03070 TENA/THI-4/PQQC family PF575_17670 PF08543 Phosphomethylpyrimidine kinase PF575_17670 PF02581 Thiamine monophosphate synthase PF575_17675 PF06942 GlpM protein PF575_17685 PF08240 Alcohol dehydrogenase GroES-like domain PF575_17685 PF00107 Zinc-binding dehydrogenase PF575_17690 PF00440 Bacterial regulatory proteins, tetR family PF575_17690 PF16925 Tetracyclin repressor-like, C-terminal domain PF575_17695 PF17760 UvrA interaction domain PF575_17695 PF17755 UvrA DNA-binding domain PF575_17700 PF00990 Diguanylate cyclase, GGDEF domain PF575_17710 PF02028 BCCT, betaine/carnitine/choline family transporter PF575_17720 PF00474 Sodium:solute symporter family PF575_17725 PF04341 Protein of unknown function, DUF485 PF575_17730 PF00512 His Kinase A (phospho-acceptor) domain PF575_17730 PF01627 Hpt domain PF575_17730 PF00072 Response regulator receiver domain PF575_17730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_17730 PF00672 HAMP domain PF575_17740 PF00072 Response regulator receiver domain PF575_17740 PF00196 Bacterial regulatory proteins, luxR family PF575_17745 PF03358 NADPH-dependent FMN reductase PF575_17750 PF00296 Luciferase-like monooxygenase PF575_17755 PF01037 Lrp/AsnC ligand binding domain PF575_17760 PF00857 Isochorismatase family PF575_17765 PF13193 AMP-binding enzyme C-terminal domain PF575_17765 PF00501 AMP-binding enzyme PF575_17765 PF16177 Acetyl-coenzyme A synthetase N-terminus PF575_17775 PF00924 Mechanosensitive ion channel PF575_17780 PF04452 RNA methyltransferase PF575_17785 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PF575_17790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF575_17815 PF01368 DHH family PF575_17815 PF02272 DHHA1 domain PF575_17815 PF17768 RecJ OB domain PF575_17820 PF01243 Pyridoxamine 5'-phosphate oxidase PF575_17820 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PF575_17825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PF575_17825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF575_17825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF575_17825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF575_17830 PF00478 IMP dehydrogenase / GMP reductase domain PF575_17830 PF00571 CBS domain PF575_17835 PF03692 Putative zinc- or iron-chelating domain PF575_17840 PF00258 Flavodoxin PF575_17840 PF01613 Flavin reductase like domain PF575_17845 PF07715 TonB-dependent Receptor Plug Domain PF575_17845 PF00593 TonB dependent receptor PF575_17850 PF01169 Uncharacterized protein family UPF0016 PF575_17860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PF575_17860 PF00364 Biotin-requiring enzyme PF575_17860 PF02817 e3 binding domain PF575_17865 PF00456 Transketolase, thiamine diphosphate binding domain PF575_17865 PF17831 Pyruvate dehydrogenase E1 component middle domain PF575_17870 PF01551 Peptidase family M23 PF575_17880 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PF575_17885 PF00091 Tubulin/FtsZ family, GTPase domain PF575_17885 PF12327 FtsZ family, C-terminal domain PF575_17890 PF02491 SHS2 domain inserted in FTSA PF575_17895 PF08478 POTRA domain, FtsQ-type PF575_17895 PF03799 Cell division protein FtsQ PF575_17900 PF01820 D-ala D-ala ligase N-terminus PF575_17900 PF07478 D-ala D-ala ligase C-terminus PF575_17905 PF01225 Mur ligase family, catalytic domain PF575_17905 PF08245 Mur ligase middle domain PF575_17905 PF02875 Mur ligase family, glutamate ligase domain PF575_17910 PF03033 Glycosyltransferase family 28 N-terminal domain PF575_17910 PF04101 Glycosyltransferase family 28 C-terminal domain PF575_17915 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PF575_17915 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PF575_17925 PF07715 TonB-dependent Receptor Plug Domain PF575_17925 PF00593 TonB dependent receptor PF575_17935 PF00156 Phosphoribosyl transferase domain PF575_17940 PF03372 Endonuclease/Exonuclease/phosphatase family PF575_17945 PF03960 ArsC family PF575_17955 PF07859 alpha/beta hydrolase fold PF575_17960 PF07694 5TMR of 5TMR-LYT PF575_17960 PF00990 Diguanylate cyclase, GGDEF domain PF575_17965 PF11412 Disulphide bond corrector protein DsbC PF575_17965 PF02683 Cytochrome C biogenesis protein transmembrane region PF575_17995 PF00576 HIUase/Transthyretin family PF575_18000 PF00860 Permease family PF575_18010 PF01494 FAD binding domain PF575_18015 PF03561 Allantoicase repeat PF575_18020 PF04115 Ureidoglycolate lyase PF575_18025 PF00204 DNA gyrase B PF575_18025 PF00986 DNA gyrase B subunit, carboxyl terminus PF575_18025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_18025 PF01751 Toprim domain PF575_18030 PF05728 Uncharacterised protein family (UPF0227) PF575_18045 PF00182 Chitinase class I PF575_18050 PF13737 Transposase DDE domain PF575_18055 PF13296 Putative type VI secretion system Rhs element Vgr PF575_18055 PF04717 Type VI secretion system, phage-baseplate injector PF575_18055 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PF575_18060 PF02600 Disulfide bond formation protein DsbB PF575_18065 PF04262 Glutamate-cysteine ligase PF575_18080 PF04286 Protein of unknown function (DUF445) PF575_18085 PF00155 Aminotransferase class I and II PF575_18090 PF01554 MatE PF575_18095 PF00106 short chain dehydrogenase PF575_18105 PF00486 Transcriptional regulatory protein, C terminal PF575_18105 PF00072 Response regulator receiver domain PF575_18110 PF11808 Phosphate regulon sensor protein PhoR PF575_18110 PF00989 PAS fold PF575_18110 PF00512 His Kinase A (phospho-acceptor) domain PF575_18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF575_18120 PF02666 Phosphatidylserine decarboxylase PF575_18125 PF00581 Rhodanese-like domain PF575_18130 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PF575_18130 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PF575_18135 PF02580 D-Tyr-tRNA(Tyr) deacylase PF575_18160 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PF575_18160 PF00925 GTP cyclohydrolase II PF575_18165 PF00885 6,7-dimethyl-8-ribityllumazine synthase PF575_18170 PF01029 NusB family PF575_18175 PF02769 AIR synthase related protein, C-terminal domain PF575_18175 PF00586 AIR synthase related protein, N-terminal domain PF575_18180 PF04608 Phosphatidylglycerophosphatase A PF575_18185 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_18185 PF14602 Hexapeptide repeat of succinyl-transferase PF575_18185 PF12804 MobA-like NTP transferase domain PF575_18190 PF01380 SIS domain PF575_18195 PF01177 Asp/Glu/Hydantoin racemase PF575_18210 PF00491 Arginase family PF575_18215 PF01979 Amidohydrolase family PF575_18220 PF00324 Amino acid permease PF575_18225 PF00221 Aromatic amino acid lyase PF575_18230 PF17392 Urocanase C-terminal domain PF575_18230 PF17391 Urocanase N-terminal domain PF575_18230 PF01175 Urocanase Rossmann-like domain PF575_18235 PF13610 DDE domain PF575_18245 PF01042 Endoribonuclease L-PSP PF575_18250 PF01168 Alanine racemase, N-terminal domain PF575_18250 PF00842 Alanine racemase, C-terminal domain PF575_18255 PF01266 FAD dependent oxidoreductase PF575_18260 PF01037 Lrp/AsnC ligand binding domain PF575_18270 PF07715 TonB-dependent Receptor Plug Domain PF575_18270 PF00593 TonB dependent receptor PF575_18285 PF00849 RNA pseudouridylate synthase PF575_18315 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PF575_18315 PF13296 Putative type VI secretion system Rhs element Vgr PF575_18315 PF04717 Type VI secretion system, phage-baseplate injector PF575_18325 PF00109 Beta-ketoacyl synthase, N-terminal domain PF575_18325 PF02801 Beta-ketoacyl synthase, C-terminal domain PF575_18355 PF00330 Aconitase family (aconitate hydratase) PF575_18355 PF00694 Aconitase C-terminal domain PF575_18360 PF00285 Citrate synthase, C-terminal domain PF575_18370 PF07729 FCD domain PF575_18370 PF00392 Bacterial regulatory proteins, gntR family PF575_18380 PF00155 Aminotransferase class I and II PF575_18385 PF09330 D-lactate dehydrogenase, membrane binding PF575_18385 PF01565 FAD binding domain PF575_18390 PF01070 FMN-dependent dehydrogenase PF575_18395 PF07729 FCD domain PF575_18395 PF00392 Bacterial regulatory proteins, gntR family PF575_18400 PF02652 L-lactate permease PF575_18405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF575_18405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PF575_18405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF575_18405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF575_18410 PF16363 GDP-mannose 4,6 dehydratase PF575_18415 PF00342 Phosphoglucose isomerase PF575_18420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PF575_18420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PF575_18420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PF575_18425 PF00483 Nucleotidyl transferase PF575_18430 PF02397 Bacterial sugar transferase PF575_18435 PF00535 Glycosyl transferase family 2 PF575_18440 PF00534 Glycosyl transferases group 1 PF575_18455 PF00534 Glycosyl transferases group 1 PF575_18455 PF13439 Glycosyltransferase Family 4 PF575_18460 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_18460 PF14602 Hexapeptide repeat of succinyl-transferase PF575_18460 PF12464 Maltose acetyltransferase PF575_18470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PF575_18475 PF00132 Bacterial transferase hexapeptide (six repeats) PF575_18480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PF575_18480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PF575_18485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PF575_18485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PF575_18485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PF575_18490 PF18412 Outer-membrane lipoprotein Wza C-terminal domain PF575_18490 PF10531 SLBB domain PF575_18490 PF02563 Polysaccharide biosynthesis/export protein PF575_18495 PF01451 Low molecular weight phosphotyrosine protein phosphatase PF575_18500 PF13614 AAA domain PF575_18500 PF13807 G-rich domain on putative tyrosine kinase PF575_18500 PF02706 Chain length determinant protein PF575_18505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF575_18505 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PF575_18510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF575_18510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PF575_18515 PF03023 Lipid II flippase MurJ PF575_18520 PF01510 N-acetylmuramoyl-L-alanine amidase PF575_18525 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PF575_18525 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PF575_18545 PF03725 3' exoribonuclease family, domain 2 PF575_18545 PF01138 3' exoribonuclease family, domain 1 PF575_18550 PF00487 Fatty acid desaturase PF575_18555 PF00175 Oxidoreductase NAD-binding domain PF575_18560 PF00440 Bacterial regulatory proteins, tetR family PF575_18565 PF08360 QacR-like protein, C-terminal region PF575_18565 PF00440 Bacterial regulatory proteins, tetR family PF575_18570 PF01323 DSBA-like thioredoxin domain PF575_18580 PF13419 Haloacid dehalogenase-like hydrolase PF575_18585 PF00106 short chain dehydrogenase PF575_18600 PF00583 Acetyltransferase (GNAT) family PF575_18600 PF00696 Amino acid kinase family PF575_18605 PF09084 NMT1/THI5 like PF575_18610 PF09084 NMT1/THI5 like PF575_18615 PF00296 Luciferase-like monooxygenase PF575_18620 PF00528 Binding-protein-dependent transport system inner membrane component PF575_18625 PF00005 ABC transporter PF575_18630 PF08362 YcdC-like protein, C-terminal region PF575_18630 PF00440 Bacterial regulatory proteins, tetR family PF575_18635 PF01048 Phosphorylase superfamily PF575_18645 PF01687 Riboflavin kinase PF575_18645 PF06574 FAD synthetase PF575_18650 PF00133 tRNA synthetases class I (I, L, M and V) PF575_18650 PF06827 Zinc finger found in FPG and IleRS PF575_18650 PF08264 Anticodon-binding domain of tRNA PF575_18655 PF01252 Signal peptidase (SPase) II PF575_18660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF575_18700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PF575_18705 PF07859 alpha/beta hydrolase fold PF575_18725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF575_18725 PF03466 LysR substrate binding domain PF575_18730 PF01025 GrpE PF575_18735 PF00012 Hsp70 protein PF575_18755 PF13406 Transglycosylase SLT domain PF575_18760 PF02222 ATP-grasp domain PF575_18760 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PF575_18765 PF00731 AIR carboxylase PF575_18775 PF02875 Mur ligase family, glutamate ligase domain PF575_18775 PF01225 Mur ligase family, catalytic domain PF575_18775 PF08245 Mur ligase middle domain PF575_18785 PF01569 PAP2 superfamily PF575_18790 PF03741 Integral membrane protein TerC family PF575_18800 PF03738 Glutathionylspermidine synthase preATP-grasp PF575_18810 PF01979 Amidohydrolase family PF575_18815 PF00156 Phosphoribosyl transferase domain PF575_18825 PF10411 Disulfide bond isomerase protein N-terminus PF575_18825 PF13098 Thioredoxin-like domain PF575_18830 PF01545 Cation efflux family PF575_18830 PF16916 Dimerisation domain of Zinc Transporter PF575_18835 PF02583 Metal-sensitive transcriptional repressor PF575_18840 PF10396 GTP-binding protein TrmE N-terminus PF575_18840 PF01926 50S ribosome-binding GTPase PF575_18840 PF12631 MnmE helical domain PF575_18845 PF14849 YidC periplasmic domain PF575_18845 PF02096 60Kd inner membrane protein PF575_18850 PF01809 Putative membrane protein insertion efficiency factor PF575_18855 PF00825 Ribonuclease P PF575_18860 PF00468 Ribosomal protein L34 PF575_18920 PF10410 DnaB-helicase binding domain of primase PF575_18920 PF08275 DNA primase catalytic core, N-terminal domain PF575_18920 PF01807 CHC2 zinc finger PF575_18960 PF00625 Guanylate kinase PF575_18985 PF02899 Phage integrase, N-terminal SAM-like domain PF575_18985 PF00589 Phage integrase family PF575_19020 PF02811 PHP domain PF575_19020 PF14579 Helix-hairpin-helix motif PF575_19020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PF575_19020 PF07733 Bacterial DNA polymerase III alpha NTPase domain PF575_19040 PF00154 recA bacterial DNA recombination protein PF575_19085 PF13476 AAA domain PF575_19110 PF03477 ATP cone domain PF575_19110 PF02867 Ribonucleotide reductase, barrel domain PF575_19110 PF00317 Ribonucleotide reductase, all-alpha domain PF575_19115 PF00268 Ribonucleotide reductase, small chain PF575_19140 PF00692 dUTPase PF575_19230 PF00929 Exonuclease PF575_19360 PF02195 ParB-like nuclease domain PF575_19365 PF09383 NIL domain PF575_19365 PF00005 ABC transporter PF575_19475 PF00877 NlpC/P60 family