locus-tag class description PF449_00005 PF00308 Bacterial dnaA protein PF449_00005 PF08299 Bacterial dnaA protein helix-turn-helix PF449_00005 PF11638 DnaA N-terminal domain PF449_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain PF449_00010 PF02767 DNA polymerase III beta subunit, central domain PF449_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain PF449_00015 PF02463 RecF/RecN/SMC N terminal domain PF449_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_00020 PF18053 DNA gyrase B subunit insert domain PF449_00020 PF01751 Toprim domain PF449_00020 PF00204 DNA gyrase B PF449_00020 PF00986 DNA gyrase B subunit, carboxyl terminus PF449_00030 PF09335 SNARE associated Golgi protein PF449_00035 PF00005 ABC transporter PF449_00035 PF12848 ABC transporter PF449_00055 PF01521 Iron-sulphur cluster biosynthesis PF449_00060 PF00561 alpha/beta hydrolase fold PF449_00065 PF03702 Anhydro-N-acetylmuramic acid kinase PF449_00070 PF00579 tRNA synthetases class I (W and Y) PF449_00110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF449_00115 PF01252 Signal peptidase (SPase) II PF449_00120 PF06827 Zinc finger found in FPG and IleRS PF449_00120 PF00133 tRNA synthetases class I (I, L, M and V) PF449_00120 PF08264 Anticodon-binding domain of tRNA PF449_00125 PF06574 FAD synthetase PF449_00125 PF01687 Riboflavin kinase PF449_00135 PF01048 Phosphorylase superfamily PF449_00140 PF00440 Bacterial regulatory proteins, tetR family PF449_00140 PF08362 YcdC-like protein, C-terminal region PF449_00145 PF00005 ABC transporter PF449_00150 PF00528 Binding-protein-dependent transport system inner membrane component PF449_00160 PF13610 DDE domain PF449_00170 PF12848 ABC transporter PF449_00170 PF00005 ABC transporter PF449_00175 PF13610 DDE domain PF449_00180 PF13610 DDE domain PF449_00185 PF00809 Pterin binding enzyme PF449_00190 PF00893 Small Multidrug Resistance protein PF449_00195 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_00200 PF10706 Aminoglycoside-2''-adenylyltransferase PF449_00205 PF13495 Phage integrase, N-terminal SAM-like domain PF449_00205 PF00589 Phage integrase family PF449_00220 PF00533 BRCA1 C Terminus (BRCT) domain PF449_00220 PF01653 NAD-dependent DNA ligase adenylation domain PF449_00220 PF03120 NAD-dependent DNA ligase OB-fold domain PF449_00220 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PF449_00220 PF12826 Helix-hairpin-helix motif PF449_00230 PF00809 Pterin binding enzyme PF449_00235 PF00893 Small Multidrug Resistance protein PF449_00240 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_00245 PF07690 Major Facilitator Superfamily PF449_00265 PF13610 DDE domain PF449_00270 PF00696 Amino acid kinase family PF449_00270 PF00583 Acetyltransferase (GNAT) family PF449_00285 PF00106 short chain dehydrogenase PF449_00290 PF13419 Haloacid dehalogenase-like hydrolase PF449_00300 PF01323 DSBA-like thioredoxin domain PF449_00305 PF00440 Bacterial regulatory proteins, tetR family PF449_00305 PF08360 QacR-like protein, C-terminal region PF449_00310 PF00440 Bacterial regulatory proteins, tetR family PF449_00315 PF00042 Globin PF449_00315 PF00970 Oxidoreductase FAD-binding domain PF449_00315 PF00175 Oxidoreductase NAD-binding domain PF449_00320 PF00487 Fatty acid desaturase PF449_00325 PF01138 3' exoribonuclease family, domain 1 PF449_00325 PF03725 3' exoribonuclease family, domain 2 PF449_00335 PF05506 Domain of unknown function (DUF756) PF449_00335 PF04185 Phosphoesterase family PF449_00345 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PF449_00345 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PF449_00350 PF01510 N-acetylmuramoyl-L-alanine amidase PF449_00355 PF03023 Lipid II flippase MurJ PF449_00360 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PF449_00360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF449_00365 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PF449_00365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF449_00370 PF13807 G-rich domain on putative tyrosine kinase PF449_00370 PF13614 AAA domain PF449_00370 PF02706 Chain length determinant protein PF449_00375 PF01451 Low molecular weight phosphotyrosine protein phosphatase PF449_00380 PF18412 Outer-membrane lipoprotein Wza C-terminal domain PF449_00380 PF10531 SLBB domain PF449_00380 PF02563 Polysaccharide biosynthesis/export protein PF449_00385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PF449_00385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PF449_00385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PF449_00390 PF01370 NAD dependent epimerase/dehydratase family PF449_00405 PF13439 Glycosyltransferase Family 4 PF449_00405 PF00534 Glycosyl transferases group 1 PF449_00435 PF00905 Penicillin binding protein transpeptidase domain PF449_00460 PF13477 Glycosyl transferase 4-like PF449_00460 PF00534 Glycosyl transferases group 1 PF449_00465 PF02397 Bacterial sugar transferase PF449_00470 PF17836 PglD N-terminal domain PF449_00470 PF14602 Hexapeptide repeat of succinyl-transferase PF449_00470 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_00475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PF449_00480 PF02719 Polysaccharide biosynthesis protein PF449_00485 PF00483 Nucleotidyl transferase PF449_00490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PF449_00490 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PF449_00490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PF449_00495 PF00342 Phosphoglucose isomerase PF449_00500 PF16363 GDP-mannose 4,6 dehydratase PF449_00505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF449_00505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF449_00505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF449_00505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PF449_00510 PF02652 L-lactate permease PF449_00515 PF00392 Bacterial regulatory proteins, gntR family PF449_00515 PF07729 FCD domain PF449_00520 PF01070 FMN-dependent dehydrogenase PF449_00525 PF09330 D-lactate dehydrogenase, membrane binding PF449_00525 PF01565 FAD binding domain PF449_00530 PF00155 Aminotransferase class I and II PF449_00540 PF07729 FCD domain PF449_00540 PF00392 Bacterial regulatory proteins, gntR family PF449_00550 PF00285 Citrate synthase, C-terminal domain PF449_00555 PF00330 Aconitase family (aconitate hydratase) PF449_00555 PF00694 Aconitase C-terminal domain PF449_00575 PF00293 NUDIX domain PF449_00605 PF00849 RNA pseudouridylate synthase PF449_00620 PF07715 TonB-dependent Receptor Plug Domain PF449_00620 PF00593 TonB dependent receptor PF449_00630 PF01037 Lrp/AsnC ligand binding domain PF449_00635 PF01266 FAD dependent oxidoreductase PF449_00640 PF00842 Alanine racemase, C-terminal domain PF449_00640 PF01168 Alanine racemase, N-terminal domain PF449_00645 PF01042 Endoribonuclease L-PSP PF449_00650 PF00324 Amino acid permease PF449_00655 PF00324 Amino acid permease PF449_00665 PF00171 Aldehyde dehydrogenase family PF449_00670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PF449_00670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PF449_00675 PF00501 AMP-binding enzyme PF449_00675 PF13193 AMP-binding enzyme C-terminal domain PF449_00680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_00680 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_00680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_00685 PF00378 Enoyl-CoA hydratase/isomerase PF449_00690 PF00378 Enoyl-CoA hydratase/isomerase PF449_00695 PF00083 Sugar (and other) transporter PF449_00695 PF07690 Major Facilitator Superfamily PF449_00700 PF00765 Autoinducer synthase PF449_00710 PF03472 Autoinducer binding domain PF449_00710 PF00196 Bacterial regulatory proteins, luxR family PF449_00715 PF00501 AMP-binding enzyme PF449_00720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_00720 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_00720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_00725 PF00975 Thioesterase domain PF449_00725 PF16197 Ketoacyl-synthetase C-terminal extension PF449_00725 PF00109 Beta-ketoacyl synthase, N-terminal domain PF449_00725 PF02801 Beta-ketoacyl synthase, C-terminal domain PF449_00725 PF08242 Methyltransferase domain PF449_00725 PF00550 Phosphopantetheine attachment site PF449_00725 PF14765 Polyketide synthase dehydratase PF449_00745 PF12697 Alpha/beta hydrolase family PF449_00750 PF01648 4'-phosphopantetheinyl transferase superfamily PF449_00765 PF01722 BolA-like protein PF449_00775 PF13614 AAA domain PF449_00790 PF09335 SNARE associated Golgi protein PF449_00795 PF07681 DoxX PF449_00800 PF04286 Protein of unknown function (DUF445) PF449_00805 PF00958 GMP synthase C terminal domain PF449_00805 PF00117 Glutamine amidotransferase class-I PF449_00805 PF02540 NAD synthase PF449_00810 PF13427 Domain of unknown function (DUF4111) PF449_00810 PF01909 Nucleotidyltransferase domain PF449_00815 PF03551 Transcriptional regulator PadR-like family PF449_00825 PF05726 Pirin C-terminal cupin domain PF449_00825 PF02678 Pirin PF449_00845 PF05746 DALR anticodon binding domain PF449_00845 PF00750 tRNA synthetases class I (R) PF449_00845 PF03485 Arginyl tRNA synthetase N terminal domain PF449_00850 PF00390 Malic enzyme, N-terminal domain PF449_00850 PF03949 Malic enzyme, NAD binding domain PF449_00860 PF04261 Dyp-type peroxidase family PF449_00865 PF01810 LysE type translocator PF449_00870 PF00950 ABC 3 transport family PF449_00875 PF00005 ABC transporter PF449_00895 PF00119 ATP synthase A chain PF449_00900 PF00137 ATP synthase subunit C PF449_00905 PF00430 ATP synthase B/B' CF(0) PF449_00910 PF00213 ATP synthase delta (OSCP) subunit PF449_00915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PF449_00915 PF00306 ATP synthase alpha/beta chain, C terminal domain PF449_00915 PF02874 ATP synthase alpha/beta family, beta-barrel domain PF449_00920 PF00231 ATP synthase PF449_00925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PF449_00925 PF02874 ATP synthase alpha/beta family, beta-barrel domain PF449_00930 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PF449_00940 PF00255 Glutathione peroxidase PF449_00950 PF07690 Major Facilitator Superfamily PF449_00955 PF00440 Bacterial regulatory proteins, tetR family PF449_00960 PF00892 EamA-like transporter family PF449_00965 PF01300 Telomere recombination PF449_00970 PF02481 DNA recombination-mediator protein A PF449_00970 PF17782 DprA winged helix domain PF449_00980 PF01327 Polypeptide deformylase PF449_01040 PF00291 Pyridoxal-phosphate dependent enzyme PF449_01050 PF03358 NADPH-dependent FMN reductase PF449_01070 PF11842 Domain of unknown function (DUF3362) PF449_01070 PF04055 Radical SAM superfamily PF449_01070 PF08497 Radical SAM N-terminal PF449_01090 PF00817 impB/mucB/samB family PF449_01090 PF11799 impB/mucB/samB family C-terminal domain PF449_01090 PF11798 IMS family HHH motif PF449_01095 PF01183 Glycosyl hydrolases family 25 PF449_01100 PF07690 Major Facilitator Superfamily PF449_01105 PF03641 Possible lysine decarboxylase PF449_01110 PF03471 Transporter associated domain PF449_01110 PF03741 Integral membrane protein TerC family PF449_01115 PF02810 SEC-C motif PF449_01120 PF03458 UPF0126 domain PF449_01125 PF07690 Major Facilitator Superfamily PF449_01130 PF00521 DNA gyrase/topoisomerase IV, subunit A PF449_01130 PF03989 DNA gyrase C-terminal domain, beta-propeller PF449_01135 PF00501 AMP-binding enzyme PF449_01135 PF13193 AMP-binding enzyme C-terminal domain PF449_01150 PF00719 Inorganic pyrophosphatase PF449_01155 PF03573 outer membrane porin, OprD family PF449_01180 PF00905 Penicillin binding protein transpeptidase domain PF449_01205 PF00543 Nitrogen regulatory protein P-II PF449_01210 PF00909 Ammonium Transporter Family PF449_01215 PF03477 ATP cone domain PF449_01220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PF449_01220 PF01872 RibD C-terminal domain PF449_01230 PF00677 Lumazine binding domain PF449_01250 PF02789 Cytosol aminopeptidase family, N-terminal domain PF449_01250 PF00883 Cytosol aminopeptidase family, catalytic domain PF449_01260 PF03739 Lipopolysaccharide export system permease LptF/LptG PF449_01265 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PF449_01265 PF01676 Metalloenzyme superfamily PF449_01270 PF00595 PDZ domain PF449_01270 PF03572 Peptidase family S41 PF449_01275 PF02954 Bacterial regulatory protein, Fis family PF449_01275 PF00072 Response regulator receiver domain PF449_01275 PF00158 Sigma-54 interaction domain PF449_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_01280 PF00512 His Kinase A (phospho-acceptor) domain PF449_01285 PF00072 Response regulator receiver domain PF449_01285 PF00196 Bacterial regulatory proteins, luxR family PF449_01290 PF00768 D-alanyl-D-alanine carboxypeptidase PF449_01295 PF00291 Pyridoxal-phosphate dependent enzyme PF449_01300 PF00742 Homoserine dehydrogenase PF449_01300 PF01842 ACT domain PF449_01300 PF03447 Homoserine dehydrogenase, NAD binding domain PF449_01305 PF10411 Disulfide bond isomerase protein N-terminus PF449_01305 PF13098 Thioredoxin-like domain PF449_01310 PF00589 Phage integrase family PF449_01310 PF02899 Phage integrase, N-terminal SAM-like domain PF449_01320 PF02421 Ferrous iron transport protein B PF449_01320 PF07670 Nucleoside recognition PF449_01320 PF07664 Ferrous iron transport protein B C terminus PF449_01330 PF08245 Mur ligase middle domain PF449_01330 PF02875 Mur ligase family, glutamate ligase domain PF449_01335 PF01098 Cell cycle protein PF449_01340 PF00749 tRNA synthetases class I (E and Q), catalytic domain PF449_01345 PF01258 Prokaryotic dksA/traR C4-type zinc finger PF449_01350 PF00149 Calcineurin-like phosphoesterase PF449_01355 PF00293 NUDIX domain PF449_01360 PF13667 ThiC-associated domain PF449_01360 PF01964 Radical SAM ThiC family PF449_01380 PF02321 Outer membrane efflux protein PF449_01385 PF01895 PhoU domain PF449_01390 PF04362 Bacterial Fe(2+) trafficking PF449_01395 PF14698 Argininosuccinate lyase C-terminal PF449_01395 PF00206 Lyase PF449_01400 PF07694 5TMR of 5TMR-LYT PF449_01400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_01400 PF06580 Histidine kinase PF449_01405 PF04397 LytTr DNA-binding domain PF449_01405 PF00072 Response regulator receiver domain PF449_01410 PF03900 Porphobilinogen deaminase, C-terminal domain PF449_01410 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PF449_01435 PF00816 H-NS histone family PF449_01450 PF00263 Bacterial type II and III secretion system protein PF449_01450 PF03958 Bacterial type II/III secretion system short domain PF449_01455 PF12401 Protein of unknown function (DUF2662) PF449_01455 PF00498 FHA domain PF449_01460 PF13419 Haloacid dehalogenase-like hydrolase PF449_01465 PF04715 Anthranilate synthase component I, N terminal region PF449_01465 PF00425 chorismate binding enzyme PF449_01490 PF03143 Elongation factor Tu C-terminal domain PF449_01490 PF03144 Elongation factor Tu domain 2 PF449_01490 PF00009 Elongation factor Tu GTP binding domain PF449_01500 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PF449_01505 PF00467 KOW motif PF449_01505 PF02357 Transcription termination factor nusG PF449_01510 PF00298 Ribosomal protein L11, RNA binding domain PF449_01510 PF03946 Ribosomal protein L11, N-terminal domain PF449_01515 PF00687 Ribosomal protein L1p/L10e family PF449_01520 PF00466 Ribosomal protein L10 PF449_01525 PF00542 Ribosomal protein L7/L12 C-terminal domain PF449_01525 PF16320 Ribosomal protein L7/L12 dimerisation domain PF449_01530 PF04560 RNA polymerase Rpb2, domain 7 PF449_01530 PF00562 RNA polymerase Rpb2, domain 6 PF449_01530 PF10385 RNA polymerase beta subunit external 1 domain PF449_01530 PF04565 RNA polymerase Rpb2, domain 3 PF449_01530 PF04561 RNA polymerase Rpb2, domain 2 PF449_01530 PF04563 RNA polymerase beta subunit PF449_01535 PF04997 RNA polymerase Rpb1, domain 1 PF449_01535 PF04983 RNA polymerase Rpb1, domain 3 PF449_01535 PF04998 RNA polymerase Rpb1, domain 5 PF449_01535 PF00623 RNA polymerase Rpb1, domain 2 PF449_01535 PF05000 RNA polymerase Rpb1, domain 4 PF449_01560 PF13726 Na+-H+ antiporter family PF449_01560 PF03553 Na+/H+ antiporter family PF449_01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_01575 PF00183 Hsp90 protein PF449_01590 PF01323 DSBA-like thioredoxin domain PF449_01600 PF00376 MerR family regulatory protein PF449_01600 PF09278 MerR, DNA binding PF449_01615 PF00108 Thiolase, N-terminal domain PF449_01615 PF02803 Thiolase, C-terminal domain PF449_01620 PF00378 Enoyl-CoA hydratase/isomerase PF449_01620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF449_01620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF449_01640 PF08459 UvrC Helix-hairpin-helix N-terminal PF449_01640 PF02151 UvrB/uvrC motif PF449_01640 PF01541 GIY-YIG catalytic domain PF449_01650 PF01066 CDP-alcohol phosphatidyltransferase PF449_01655 PF02805 Metal binding domain of Ada PF449_01655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PF449_01655 PF12833 Helix-turn-helix domain PF449_01655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PF449_01680 PF13533 Biotin-lipoyl like PF449_01685 PF03652 Holliday junction resolvase PF449_01690 PF02622 Uncharacterized ACR, COG1678 PF449_01695 PF02463 RecF/RecN/SMC N terminal domain PF449_01705 PF06865 Pyrimidine/purine nucleoside phosphorylase PF449_01710 PF00588 SpoU rRNA Methylase family PF449_01710 PF08032 RNA 2'-O ribose methyltransferase substrate binding PF449_01720 PF01121 Dephospho-CoA kinase PF449_01725 PF01478 Type IV leader peptidase family PF449_01725 PF06750 Bacterial Peptidase A24 N-terminal domain PF449_01730 PF00482 Type II secretion system (T2SS), protein F PF449_01735 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PF449_01735 PF00437 Type II/IV secretion system protein PF449_01740 PF00121 Triosephosphate isomerase PF449_01745 PF03840 Preprotein translocase SecG subunit PF449_01765 PF02576 RimP N-terminal domain PF449_01765 PF17384 RimP C-terminal SH3 domain PF449_01770 PF13184 NusA-like KH domain PF449_01770 PF08529 NusA N-terminal domain PF449_01770 PF00575 S1 RNA binding domain PF449_01775 PF00009 Elongation factor Tu GTP binding domain PF449_01775 PF11987 Translation-initiation factor 2 PF449_01775 PF08364 Bacterial translation initiation factor IF-2 associated region PF449_01775 PF04760 Translation initiation factor IF-2, N-terminal region PF449_01780 PF02033 Ribosome-binding factor A PF449_01785 PF03334 Na+/H+ antiporter subunit PF449_01790 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) PF449_01795 PF01899 Na+/H+ ion antiporter subunit PF449_01800 PF00361 Proton-conducting membrane transporter PF449_01805 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PF449_01810 PF13244 Domain of unknown function (DUF4040) PF449_01810 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter PF449_01810 PF00361 Proton-conducting membrane transporter PF449_01810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PF449_01825 PF01502 Phosphoribosyl-AMP cyclohydrolase PF449_01830 PF01494 FAD binding domain PF449_01835 PF03109 ABC1 family PF449_01845 PF01209 ubiE/COQ5 methyltransferase family PF449_01855 PF03976 Polyphosphate kinase 2 (PPK2) PF449_01865 PF17946 RecC C-terminal domain PF449_01870 PF13361 UvrD-like helicase C-terminal domain PF449_01870 PF00580 UvrD/REP helicase N-terminal domain PF449_01870 PF12705 PD-(D/E)XK nuclease superfamily PF449_01875 PF13538 UvrD-like helicase C-terminal domain PF449_01880 PF00144 Beta-lactamase PF449_01885 PF00312 Ribosomal protein S15 PF449_01890 PF00013 KH domain PF449_01890 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PF449_01890 PF01138 3' exoribonuclease family, domain 1 PF449_01890 PF03725 3' exoribonuclease family, domain 2 PF449_01890 PF00575 S1 RNA binding domain PF449_01895 PF01544 CorA-like Mg2+ transporter protein PF449_01905 PF00226 DnaJ domain PF449_01905 PF01556 DnaJ C terminal domain PF449_01915 PF01430 Hsp33 protein PF449_01920 PF00999 Sodium/hydrogen exchanger family PF449_01920 PF02254 TrkA-N domain PF449_01925 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PF449_01925 PF18074 Primosomal protein N C-terminal domain PF449_01925 PF00271 Helicase conserved C-terminal domain PF449_01925 PF17764 3′ DNA-binding domain (3′BD) PF449_01925 PF00270 DEAD/DEAH box helicase PF449_01930 PF00482 Type II secretion system (T2SS), protein F PF449_01935 PF07963 Prokaryotic N-terminal methylation motif PF449_01935 PF08334 Type II secretion system (T2SS), protein G PF449_01945 PF01588 Putative tRNA binding domain PF449_01950 PF00795 Carbon-nitrogen hydrolase PF449_01955 PF03471 Transporter associated domain PF449_01955 PF00571 CBS domain PF449_01960 PF01206 Sulfurtransferase TusA PF449_01980 PF01177 Asp/Glu/Hydantoin racemase PF449_01990 PF00762 Ferrochelatase PF449_01995 PF00753 Metallo-beta-lactamase superfamily PF449_02000 PF03884 DNA gyrase inhibitor YacG PF449_02010 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_02010 PF13247 4Fe-4S dicluster domain PF449_02010 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PF449_02020 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PF449_02030 PF01197 Ribosomal protein L31 PF449_02035 PF03109 ABC1 family PF449_02040 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF449_02040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_02045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF449_02045 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_02045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_02050 PF01554 MatE PF449_02060 PF06969 HemN C-terminal domain PF449_02060 PF04055 Radical SAM superfamily PF449_02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_02070 PF03466 LysR substrate binding domain PF449_02085 PF00501 AMP-binding enzyme PF449_02085 PF13193 AMP-binding enzyme C-terminal domain PF449_02090 PF12111 Polyribonucleotide phosphorylase C terminal PF449_02090 PF00575 S1 RNA binding domain PF449_02090 PF10150 Ribonuclease E/G family PF449_02095 PF00849 RNA pseudouridylate synthase PF449_02095 PF01479 S4 domain PF449_02115 PF08279 HTH domain PF449_02115 PF13280 WYL domain PF449_02120 PF02798 Glutathione S-transferase, N-terminal domain PF449_02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_02130 PF03466 LysR substrate binding domain PF449_02135 PF12706 Beta-lactamase superfamily domain PF449_02145 PF00141 Peroxidase PF449_02150 PF01590 GAF domain PF449_02150 PF05524 PEP-utilising enzyme, N-terminal PF449_02150 PF02896 PEP-utilising enzyme, TIM barrel domain PF449_02150 PF00391 PEP-utilising enzyme, mobile domain PF449_02155 PF00293 NUDIX domain PF449_02165 PF03466 LysR substrate binding domain PF449_02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_02175 PF00330 Aconitase family (aconitate hydratase) PF449_02180 PF00694 Aconitase C-terminal domain PF449_02190 PF00180 Isocitrate/isopropylmalate dehydrogenase PF449_02205 PF01176 Translation initiation factor 1A / IF-1 PF449_02215 PF01416 tRNA pseudouridine synthase PF449_02235 PF01118 Semialdehyde dehydrogenase, NAD binding domain PF449_02235 PF02774 Semialdehyde dehydrogenase, dimerisation domain PF449_02245 PF00375 Sodium:dicarboxylate symporter family PF449_02255 PF03279 Bacterial lipid A biosynthesis acyltransferase PF449_02260 PF01810 LysE type translocator PF449_02265 PF12848 ABC transporter PF449_02265 PF00005 ABC transporter PF449_02265 PF16326 ABC transporter C-terminal domain PF449_02270 PF04102 SlyX PF449_02275 PF08240 Alcohol dehydrogenase GroES-like domain PF449_02275 PF00107 Zinc-binding dehydrogenase PF449_02280 PF01638 HxlR-like helix-turn-helix PF449_02290 PF08272 Topoisomerase I zinc-ribbon-like PF449_02290 PF01131 DNA topoisomerase PF449_02290 PF01751 Toprim domain PF449_02290 PF01396 Topoisomerase DNA binding C4 zinc finger PF449_02305 PF00580 UvrD/REP helicase N-terminal domain PF449_02305 PF13361 UvrD-like helicase C-terminal domain PF449_02310 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF449_02330 PF02254 TrkA-N domain PF449_02330 PF00999 Sodium/hydrogen exchanger family PF449_02335 PF00471 Ribosomal protein L33 PF449_02340 PF00830 Ribosomal L28 family PF449_02345 PF00171 Aldehyde dehydrogenase family PF449_02355 PF01842 ACT domain PF449_02355 PF00551 Formyl transferase PF449_02365 PF01618 MotA/TolQ/ExbB proton channel family PF449_02375 PF01625 Peptide methionine sulfoxide reductase PF449_02385 PF00186 Dihydrofolate reductase PF449_02390 PF00303 Thymidylate synthase PF449_02405 PF01790 Prolipoprotein diacylglyceryl transferase PF449_02425 PF00902 Sec-independent protein translocase protein (TatC) PF449_02430 PF02416 mttA/Hcf106 family PF449_02435 PF02416 mttA/Hcf106 family PF449_02445 PF01725 Ham1 family PF449_02455 PF07021 Methionine biosynthesis protein MetW PF449_02455 PF00561 alpha/beta hydrolase fold PF449_02460 PF00561 alpha/beta hydrolase fold PF449_02465 PF00682 HMGL-like PF449_02465 PF08502 LeuA allosteric (dimerisation) domain PF449_02470 PF13640 2OG-Fe(II) oxygenase superfamily PF449_02470 PF18331 PKHD-type hydroxylase C-terminal domain PF449_02475 PF07715 TonB-dependent Receptor Plug Domain PF449_02475 PF00593 TonB dependent receptor PF449_02480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF449_02480 PF05698 Bacterial trigger factor protein (TF) C-terminus PF449_02480 PF05697 Bacterial trigger factor protein (TF) PF449_02485 PF00574 Clp protease PF449_02490 PF06689 ClpX C4-type zinc finger PF449_02490 PF07724 AAA domain (Cdc48 subfamily) PF449_02490 PF10431 C-terminal, D2-small domain, of ClpB protein PF449_02505 PF05681 Fumarate hydratase (Fumerase) PF449_02505 PF05683 Fumarase C-terminus PF449_02510 PF07085 DRTGG domain PF449_02510 PF01515 Phosphate acetyl/butaryl transferase PF449_02515 PF00871 Acetokinase family PF449_02520 PF00920 Dehydratase family PF449_02525 PF01081 KDPG and KHG aldolase PF449_02530 PF02447 GntP family permease PF449_02535 PF01202 Shikimate kinase PF449_02540 PF00171 Aldehyde dehydrogenase family PF449_02545 PF00171 Aldehyde dehydrogenase family PF449_02550 PF00561 alpha/beta hydrolase fold PF449_02560 PF00933 Glycosyl hydrolase family 3 N terminal domain PF449_02565 PF00595 PDZ domain PF449_02565 PF17804 Tail specific protease N-terminal domain PF449_02565 PF11818 C-terminal domain of tail specific protease (DUF3340) PF449_02565 PF03572 Peptidase family S41 PF449_02570 PF13439 Glycosyltransferase Family 4 PF449_02570 PF00534 Glycosyl transferases group 1 PF449_02575 PF01569 PAP2 superfamily PF449_02580 PF04384 Iron-sulphur cluster assembly PF449_02585 PF00334 Nucleoside diphosphate kinase PF449_02590 PF04055 Radical SAM superfamily PF449_02600 PF13464 Domain of unknown function (DUF4115) PF449_02605 PF04551 GcpE protein PF449_02610 PF13393 Histidyl-tRNA synthetase PF449_02610 PF03129 Anticodon binding domain PF449_02620 PF13360 PQQ-like domain PF449_02625 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PF449_02625 PF01926 50S ribosome-binding GTPase PF449_02635 PF02556 Preprotein translocase subunit SecB PF449_02640 PF00462 Glutaredoxin PF449_02650 PF03193 RsgA GTPase PF449_02655 PF00929 Exonuclease PF449_02670 PF02321 Outer membrane efflux protein PF449_02675 PF00005 ABC transporter PF449_02675 PF02687 FtsX-like permease family PF449_02675 PF12704 MacB-like periplasmic core domain PF449_02680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF449_02695 PF00133 tRNA synthetases class I (I, L, M and V) PF449_02695 PF08264 Anticodon-binding domain of tRNA PF449_02695 PF13603 Leucyl-tRNA synthetase, Domain 2 PF449_02695 PF09334 tRNA synthetases class I (M) PF449_02705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PF449_02705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PF449_02705 PF00205 Thiamine pyrophosphate enzyme, central domain PF449_02710 PF10369 Small subunit of acetolactate synthase PF449_02715 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PF449_02715 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PF449_02720 PF03707 Bacterial signalling protein N terminal repeat PF449_02720 PF00990 Diguanylate cyclase, GGDEF domain PF449_02720 PF00563 EAL domain PF449_02740 PF00009 Elongation factor Tu GTP binding domain PF449_02740 PF16658 Class II release factor RF3, C-terminal domain PF449_02740 PF03144 Elongation factor Tu domain 2 PF449_02755 PF01026 TatD related DNase PF449_02760 PF00330 Aconitase family (aconitate hydratase) PF449_02760 PF00694 Aconitase C-terminal domain PF449_02765 PF00899 ThiF family PF449_02775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_02775 PF03466 LysR substrate binding domain PF449_02785 PF01207 Dihydrouridine synthase (Dus) PF449_02790 PF00589 Phage integrase family PF449_02855 PF02322 Cytochrome bd terminal oxidase subunit II PF449_02860 PF01654 Cytochrome bd terminal oxidase subunit I PF449_02875 PF07715 TonB-dependent Receptor Plug Domain PF449_02875 PF00593 TonB dependent receptor PF449_02880 PF00593 TonB dependent receptor PF449_02880 PF07715 TonB-dependent Receptor Plug Domain PF449_02915 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PF449_02915 PF13296 Putative type VI secretion system Rhs element Vgr PF449_02915 PF04717 Type VI secretion system, phage-baseplate injector PF449_02930 PF13742 OB-fold nucleic acid binding domain PF449_02930 PF02601 Exonuclease VII, large subunit PF449_02945 PF00004 ATPase family associated with various cellular activities (AAA) PF449_02945 PF17862 AAA+ lid domain PF449_02945 PF06480 FtsH Extracellular PF449_02945 PF01434 Peptidase family M41 PF449_02955 PF07690 Major Facilitator Superfamily PF449_02965 PF00892 EamA-like transporter family PF449_02970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PF449_02970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PF449_02975 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PF449_02980 PF02233 NAD(P) transhydrogenase beta subunit PF449_02985 PF00106 short chain dehydrogenase PF449_03000 PF01261 Xylose isomerase-like TIM barrel PF449_03005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PF449_03005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PF449_03010 PF00378 Enoyl-CoA hydratase/isomerase PF449_03015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_03015 PF00512 His Kinase A (phospho-acceptor) domain PF449_03015 PF01627 Hpt domain PF449_03015 PF00672 HAMP domain PF449_03015 PF00072 Response regulator receiver domain PF449_03015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PF449_03020 PF00291 Pyridoxal-phosphate dependent enzyme PF449_03030 PF05958 tRNA (Uracil-5-)-methyltransferase PF449_03035 PF13291 ACT domain PF449_03035 PF02824 TGS domain PF449_03035 PF04607 Region found in RelA / SpoT proteins PF449_03045 PF03819 MazG nucleotide pyrophosphohydrolase domain PF449_03055 PF01743 Poly A polymerase head domain PF449_03055 PF12627 Probable RNA and SrmB- binding site of polymerase A PF449_03055 PF12626 Polymerase A arginine-rich C-terminus PF449_03060 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PF449_03065 PF02548 Ketopantoate hydroxymethyltransferase PF449_03070 PF02569 Pantoate-beta-alanine ligase PF449_03075 PF03668 P-loop ATPase protein family PF449_03080 PF00381 PTS HPr component phosphorylation site PF449_03085 PF04751 Protein of unknown function (DUF615) PF449_03090 PF13193 AMP-binding enzyme C-terminal domain PF449_03090 PF00501 AMP-binding enzyme PF449_03095 PF02824 TGS domain PF449_03095 PF03129 Anticodon binding domain PF449_03095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PF449_03095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PF449_03100 PF05198 Translation initiation factor IF-3, N-terminal domain PF449_03100 PF00707 Translation initiation factor IF-3, C-terminal domain PF449_03105 PF00043 Glutathione S-transferase, C-terminal domain PF449_03105 PF02798 Glutathione S-transferase, N-terminal domain PF449_03110 PF09335 SNARE associated Golgi protein PF449_03115 PF07690 Major Facilitator Superfamily PF449_03125 PF01632 Ribosomal protein L35 PF449_03130 PF00453 Ribosomal protein L20 PF449_03150 PF01409 tRNA synthetases class II core domain (F) PF449_03150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PF449_03155 PF03483 B3/4 domain PF449_03155 PF03484 tRNA synthetase B5 domain PF449_03155 PF01588 Putative tRNA binding domain PF449_03155 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PF449_03155 PF03147 Ferredoxin-fold anticodon binding domain PF449_03160 PF00216 Bacterial DNA-binding protein PF449_03175 PF07498 Rho termination factor, N-terminal domain PF449_03175 PF07497 Rho termination factor, RNA-binding domain PF449_03175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PF449_03180 PF00085 Thioredoxin PF449_03185 PF02541 Ppx/GppA phosphatase family PF449_03190 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PF449_03195 PF09179 TilS substrate binding domain PF449_03195 PF01171 PP-loop family PF449_03195 PF11734 TilS substrate C-terminal domain PF449_03200 PF03807 NADP oxidoreductase coenzyme F420-dependent PF449_03200 PF14748 Pyrroline-5-carboxylate reductase dimerisation PF449_03205 PF02325 YGGT family PF449_03210 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PF449_03210 PF01612 3'-5' exonuclease PF449_03210 PF01367 5'-3' exonuclease, C-terminal SAM fold PF449_03210 PF00476 DNA polymerase family A PF449_03230 PF00437 Type II/IV secretion system protein PF449_03235 PF02566 OsmC-like protein PF449_03240 PF01047 MarR family PF449_03250 PF00795 Carbon-nitrogen hydrolase PF449_03295 PF00309 Sigma-54 factor, Activator interacting domain (AID) PF449_03295 PF04963 Sigma-54 factor, core binding domain PF449_03295 PF04552 Sigma-54, DNA binding domain PF449_03300 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PF449_03305 PF01722 BolA-like protein PF449_03310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PF449_03315 PF01634 ATP phosphoribosyltransferase PF449_03320 PF00815 Histidinol dehydrogenase PF449_03325 PF00155 Aminotransferase class I and II PF449_03330 PF04715 Anthranilate synthase component I, N terminal region PF449_03330 PF00425 chorismate binding enzyme PF449_03380 PF00293 NUDIX domain PF449_03385 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_03390 PF00814 Glycoprotease family PF449_03395 PF04445 Putative SAM-dependent methyltransferase PF449_03405 PF00756 Putative esterase PF449_03415 PF00834 Ribulose-phosphate 3 epimerase family PF449_03430 PF00394 Multicopper oxidase PF449_03430 PF07731 Multicopper oxidase PF449_03430 PF07732 Multicopper oxidase PF449_03445 PF00893 Small Multidrug Resistance protein PF449_03450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PF449_03450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PF449_03455 PF01960 ArgJ family PF449_03460 PF02445 Quinolinate synthetase A protein PF449_03485 PF00962 Adenosine/AMP deaminase PF449_03490 PF08240 Alcohol dehydrogenase GroES-like domain PF449_03490 PF00107 Zinc-binding dehydrogenase PF449_03495 PF03466 LysR substrate binding domain PF449_03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_03500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_03500 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_03500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_03505 PF07690 Major Facilitator Superfamily PF449_03510 PF02515 CoA-transferase family III PF449_03520 PF00890 FAD binding domain PF449_03520 PF14537 Cytochrome c3 PF449_03525 PF03466 LysR substrate binding domain PF449_03525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_03535 PF07690 Major Facilitator Superfamily PF449_03540 PF03466 LysR substrate binding domain PF449_03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_03545 PF01810 LysE type translocator PF449_03550 PF03466 LysR substrate binding domain PF449_03550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_03560 PF08267 Cobalamin-independent synthase, N-terminal domain PF449_03560 PF01717 Cobalamin-independent synthase, Catalytic domain PF449_03565 PF01613 Flavin reductase like domain PF449_03610 PF02567 Phenazine biosynthesis-like protein PF449_03625 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system PF449_03640 PF00083 Sugar (and other) transporter PF449_03650 PF00293 NUDIX domain PF449_03650 PF09297 NADH pyrophosphatase zinc ribbon domain PF449_03655 PF00171 Aldehyde dehydrogenase family PF449_03660 PF00296 Luciferase-like monooxygenase PF449_03665 PF01613 Flavin reductase like domain PF449_03670 PF01557 Fumarylacetoacetate (FAA) hydrolase family PF449_03675 PF00892 EamA-like transporter family PF449_03680 PF00268 Ribonucleotide reductase, small chain PF449_03690 PF03477 ATP cone domain PF449_03690 PF02867 Ribonucleotide reductase, barrel domain PF449_03690 PF00317 Ribonucleotide reductase, all-alpha domain PF449_03700 PF00072 Response regulator receiver domain PF449_03700 PF00486 Transcriptional regulatory protein, C terminal PF449_03705 PF00672 HAMP domain PF449_03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_03705 PF00512 His Kinase A (phospho-acceptor) domain PF449_03715 PF00990 Diguanylate cyclase, GGDEF domain PF449_03715 PF17151 Periplasmic sensor domain PF449_03720 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PF449_03725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PF449_03730 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PF449_03730 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PF449_03740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PF449_03740 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PF449_03740 PF10531 SLBB domain PF449_03745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PF449_03745 PF00384 Molybdopterin oxidoreductase PF449_03745 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PF449_03750 PF00146 NADH dehydrogenase PF449_03755 PF12838 4Fe-4S dicluster domain PF449_03760 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PF449_03765 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PF449_03770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PF449_03770 PF00361 Proton-conducting membrane transporter PF449_03775 PF00361 Proton-conducting membrane transporter PF449_03780 PF00361 Proton-conducting membrane transporter PF449_03790 PF00313 'Cold-shock' DNA-binding domain PF449_03800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_03800 PF03466 LysR substrate binding domain PF449_03805 PF00175 Oxidoreductase NAD-binding domain PF449_03805 PF00970 Oxidoreductase FAD-binding domain PF449_03820 PF05552 Conserved TM helix PF449_03835 PF00291 Pyridoxal-phosphate dependent enzyme PF449_03840 PF13533 Biotin-lipoyl like PF449_03865 PF09334 tRNA synthetases class I (M) PF449_03865 PF01588 Putative tRNA binding domain PF449_03875 PF10609 NUBPL iron-transfer P-loop NTPase PF449_03880 PF01048 Phosphorylase superfamily PF449_03895 PF00692 dUTPase PF449_03935 PF01207 Dihydrouridine synthase (Dus) PF449_03945 PF02978 Signal peptide binding domain PF449_03945 PF02881 SRP54-type protein, helical bundle domain PF449_03945 PF00448 SRP54-type protein, GTPase domain PF449_03950 PF03309 Type III pantothenate kinase PF449_03960 PF01925 Sulfite exporter TauE/SafE PF449_03970 PF06470 SMC proteins Flexible Hinge Domain PF449_03970 PF02463 RecF/RecN/SMC N terminal domain PF449_03980 PF00533 BRCA1 C Terminus (BRCT) domain PF449_03980 PF01653 NAD-dependent DNA ligase adenylation domain PF449_03980 PF03120 NAD-dependent DNA ligase OB-fold domain PF449_03980 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PF449_03980 PF12826 Helix-hairpin-helix motif PF449_03985 PF00210 Ferritin-like domain PF449_03990 PF07690 Major Facilitator Superfamily PF449_03995 PF00982 Glycosyltransferase family 20 PF449_04000 PF02358 Trehalose-phosphatase PF449_04005 PF12697 Alpha/beta hydrolase family PF449_04005 PF08241 Methyltransferase domain PF449_04010 PF00202 Aminotransferase class-III PF449_04010 PF06968 Biotin and Thiamin Synthesis associated domain PF449_04010 PF04055 Radical SAM superfamily PF449_04015 PF00155 Aminotransferase class I and II PF449_04030 PF00849 RNA pseudouridylate synthase PF449_04030 PF01479 S4 domain PF449_04035 PF04079 Segregation and condensation complex subunit ScpB PF449_04040 PF02616 Segregation and condensation protein ScpA PF449_04045 PF01300 Telomere recombination PF449_04050 PF04315 Elongation factor P hydroxylase PF449_04055 PF02620 Large ribosomal RNA subunit accumulation protein YceD PF449_04060 PF01783 Ribosomal L32p protein family PF449_04065 PF00698 Acyl transferase domain PF449_04075 PF00550 Phosphopantetheine attachment site PF449_04080 PF04972 BON domain PF449_04080 PF01476 LysM domain PF449_04085 PF08543 Phosphomethylpyrimidine kinase PF449_04085 PF03070 TENA/THI-4/PQQC family PF449_04085 PF02581 Thiamine monophosphate synthase PF449_04095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PF449_04110 PF02261 Aspartate decarboxylase PF449_04115 PF01195 Peptidyl-tRNA hydrolase PF449_04120 PF01386 Ribosomal L25p family PF449_04125 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PF449_04125 PF14572 Phosphoribosyl synthetase-associated domain PF449_04150 PF00288 GHMP kinases N terminal domain PF449_04150 PF08544 GHMP kinases C terminal PF449_04155 PF03550 Outer membrane lipoprotein LolB PF449_04165 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PF449_04165 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PF449_04165 PF01488 Shikimate / quinate 5-dehydrogenase PF449_04170 PF08278 DNA primase DnaG DnaB-binding PF449_04170 PF10410 DnaB-helicase binding domain of primase PF449_04170 PF08275 DNA primase catalytic core, N-terminal domain PF449_04170 PF01807 CHC2 zinc finger PF449_04175 PF13525 Outer membrane lipoprotein PF449_04180 PF00849 RNA pseudouridylate synthase PF449_04180 PF01479 S4 domain PF449_04185 PF02578 Multi-copper polyphenol oxidoreductase laccase PF449_04190 PF03358 NADPH-dependent FMN reductase PF449_04195 PF01668 SmpB protein PF449_04200 PF01467 Cytidylyltransferase-like PF449_04205 PF00037 4Fe-4S binding domain PF449_04225 PF03466 LysR substrate binding domain PF449_04225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_04230 PF00180 Isocitrate/isopropylmalate dehydrogenase PF449_04235 PF02028 BCCT, betaine/carnitine/choline family transporter PF449_04240 PF07859 alpha/beta hydrolase fold PF449_04245 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF449_04245 PF00355 Rieske [2Fe-2S] domain PF449_04250 PF00171 Aldehyde dehydrogenase family PF449_04255 PF00175 Oxidoreductase NAD-binding domain PF449_04255 PF00111 2Fe-2S iron-sulfur cluster binding domain PF449_04255 PF00970 Oxidoreductase FAD-binding domain PF449_04270 PF02540 NAD synthase PF449_04270 PF00795 Carbon-nitrogen hydrolase PF449_04280 PF05726 Pirin C-terminal cupin domain PF449_04280 PF02678 Pirin PF449_04285 PF03653 Uncharacterised protein family (UPF0093) PF449_04290 PF00109 Beta-ketoacyl synthase, N-terminal domain PF449_04290 PF02801 Beta-ketoacyl synthase, C-terminal domain PF449_04300 PF00164 Ribosomal protein S12/S23 PF449_04305 PF00177 Ribosomal protein S7p/S5e PF449_04310 PF03144 Elongation factor Tu domain 2 PF449_04310 PF00009 Elongation factor Tu GTP binding domain PF449_04310 PF03764 Elongation factor G, domain IV PF449_04310 PF14492 Elongation Factor G, domain II PF449_04310 PF00679 Elongation factor G C-terminus PF449_04315 PF00009 Elongation factor Tu GTP binding domain PF449_04315 PF03144 Elongation factor Tu domain 2 PF449_04315 PF03143 Elongation factor Tu C-terminal domain PF449_04330 PF00583 Acetyltransferase (GNAT) family PF449_04335 PF04377 Arginine-tRNA-protein transferase, C terminus PF449_04335 PF04376 Arginine-tRNA-protein transferase, N terminus PF449_04340 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PF449_04345 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_04350 PF01580 FtsK/SpoIIIE family PF449_04350 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PF449_04350 PF17854 FtsK alpha domain PF449_04350 PF09397 Ftsk gamma domain PF449_04355 PF01810 LysE type translocator PF449_04365 PF03776 Septum formation topological specificity factor MinE PF449_04370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PF449_04375 PF03775 Septum formation inhibitor MinC, C-terminal domain PF449_04385 PF01553 Acyltransferase PF449_04390 PF13488 Glycine zipper PF449_04390 PF00691 OmpA family PF449_04395 PF00580 UvrD/REP helicase N-terminal domain PF449_04395 PF13361 UvrD-like helicase C-terminal domain PF449_04400 PF00692 dUTPase PF449_04405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF449_04405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF449_04405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF449_04405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PF449_04410 PF00696 Amino acid kinase family PF449_04420 PF13230 Glutamine amidotransferases class-II PF449_04425 PF01814 Hemerythrin HHE cation binding domain PF449_04435 PF03658 RnfH family Ubiquitin PF449_04440 PF04355 SmpA / OmlA family PF449_04445 PF01475 Ferric uptake regulator family PF449_04450 PF00437 Type II/IV secretion system protein PF449_04455 PF00437 Type II/IV secretion system protein PF449_04460 PF01168 Alanine racemase, N-terminal domain PF449_04470 PF12320 Type 5 capsule protein repressor C-terminal domain PF449_04470 PF00149 Calcineurin-like phosphoesterase PF449_04490 PF08338 Domain of unknown function (DUF1731) PF449_04490 PF01370 NAD dependent epimerase/dehydratase family PF449_04495 PF01266 FAD dependent oxidoreductase PF449_04500 PF00490 Delta-aminolevulinic acid dehydratase PF449_04505 PF03061 Thioesterase superfamily PF449_04510 PF13533 Biotin-lipoyl like PF449_04515 PF07690 Major Facilitator Superfamily PF449_04590 PF00929 Exonuclease PF449_04625 PF01381 Helix-turn-helix PF449_04625 PF00717 Peptidase S24-like PF449_04670 PF00145 C-5 cytosine-specific DNA methylase PF449_04680 PF01695 IstB-like ATP binding protein PF449_04885 PF05016 ParE toxin of type II toxin-antitoxin system, parDE PF449_04925 PF00712 DNA polymerase III beta subunit, N-terminal domain PF449_04925 PF02767 DNA polymerase III beta subunit, central domain PF449_04925 PF02768 DNA polymerase III beta subunit, C-terminal domain PF449_05025 PF00589 Phage integrase family PF449_05025 PF13356 Arm DNA-binding domain PF449_05070 PF00436 Single-strand binding protein family PF449_05120 PF02384 N-6 DNA Methylase PF449_05120 PF12161 HsdM N-terminal domain PF449_05130 PF08463 EcoEI R protein C-terminal PF449_05130 PF00271 Helicase conserved C-terminal domain PF449_05130 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PF449_05130 PF04851 Type III restriction enzyme, res subunit PF449_05140 PF00083 Sugar (and other) transporter PF449_05145 PF00701 Dihydrodipicolinate synthetase family PF449_05155 PF04542 Sigma-70 region 2 PF449_05155 PF08281 Sigma-70, region 4 PF449_05165 PF07715 TonB-dependent Receptor Plug Domain PF449_05165 PF00593 TonB dependent receptor PF449_05175 PF04575 Protein of unknown function (DUF560) PF449_05185 PF01126 Heme oxygenase PF449_05210 PF13520 Amino acid permease PF449_05215 PF02574 Homocysteine S-methyltransferase PF449_05225 PF06039 Malate:quinone oxidoreductase (Mqo) PF449_05230 PF05199 GMC oxidoreductase PF449_05230 PF00732 GMC oxidoreductase PF449_05235 PF00171 Aldehyde dehydrogenase family PF449_05240 PF13977 BetI-type transcriptional repressor, C-terminal PF449_05240 PF00440 Bacterial regulatory proteins, tetR family PF449_05245 PF02028 BCCT, betaine/carnitine/choline family transporter PF449_05250 PF02028 BCCT, betaine/carnitine/choline family transporter PF449_05260 PF03061 Thioesterase superfamily PF449_05270 PF02492 CobW/HypB/UreG, nucleotide-binding domain PF449_05270 PF07683 Cobalamin synthesis protein cobW C-terminal domain PF449_05275 PF00375 Sodium:dicarboxylate symporter family PF449_05280 PF07152 YaeQ protein PF449_05285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF449_05290 PF01522 Polysaccharide deacetylase PF449_05290 PF14883 Hypothetical glycosyl hydrolase family 13 PF449_05295 PF00535 Glycosyl transferase family 2 PF449_05305 PF00378 Enoyl-CoA hydratase/isomerase PF449_05320 PF01614 Bacterial transcriptional regulator PF449_05320 PF09339 IclR helix-turn-helix domain PF449_05325 PF00355 Rieske [2Fe-2S] domain PF449_05335 PF00355 Rieske [2Fe-2S] domain PF449_05345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF449_05350 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_05350 PF14759 Reductase C-terminal PF449_05355 PF07690 Major Facilitator Superfamily PF449_05365 PF12697 Alpha/beta hydrolase family PF449_05375 PF01958 Domain of unknown function DUF108 PF449_05375 PF03447 Homoserine dehydrogenase, NAD binding domain PF449_05380 PF00171 Aldehyde dehydrogenase family PF449_05385 PF00205 Thiamine pyrophosphate enzyme, central domain PF449_05385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PF449_05385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PF449_05395 PF07690 Major Facilitator Superfamily PF449_05400 PF01327 Polypeptide deformylase PF449_05405 PF04960 Glutaminase PF449_05410 PF02311 AraC-like ligand binding domain PF449_05410 PF12833 Helix-turn-helix domain PF449_05415 PF07690 Major Facilitator Superfamily PF449_05420 PF01263 Aldose 1-epimerase PF449_05430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_05430 PF03466 LysR substrate binding domain PF449_05440 PF07690 Major Facilitator Superfamily PF449_05445 PF00456 Transketolase, thiamine diphosphate binding domain PF449_05450 PF02779 Transketolase, pyrimidine binding domain PF449_05450 PF02780 Transketolase, C-terminal domain PF449_05455 PF02574 Homocysteine S-methyltransferase PF449_05455 PF02965 Vitamin B12 dependent methionine synthase, activation domain PF449_05455 PF02607 B12 binding domain PF449_05455 PF02310 B12 binding domain PF449_05455 PF00809 Pterin binding enzyme PF449_05460 PF01384 Phosphate transporter family PF449_05465 PF00291 Pyridoxal-phosphate dependent enzyme PF449_05480 PF03781 Sulfatase-modifying factor enzyme 1 PF449_05485 PF00884 Sulfatase PF449_05495 PF01521 Iron-sulphur cluster biosynthesis PF449_05495 PF01106 NifU-like domain PF449_05500 PF07715 TonB-dependent Receptor Plug Domain PF449_05500 PF00593 TonB dependent receptor PF449_05510 PF00561 alpha/beta hydrolase fold PF449_05515 PF00484 Carbonic anhydrase PF449_05520 PF13472 GDSL-like Lipase/Acylhydrolase family PF449_05525 PF00005 ABC transporter PF449_05535 PF01694 Rhomboid family PF449_05540 PF00912 Transglycosylase PF449_05545 PF02503 Polyphosphate kinase middle domain PF449_05545 PF13090 Polyphosphate kinase C-terminal domain 2 PF449_05545 PF17941 Polyphosphate kinase C-terminal domain 1 PF449_05545 PF13089 Polyphosphate kinase N-terminal domain PF449_05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_05560 PF03466 LysR substrate binding domain PF449_05565 PF00561 alpha/beta hydrolase fold PF449_05570 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_05570 PF18113 Rubredoxin binding C-terminal domain PF449_05575 PF00301 Rubredoxin PF449_05590 PF00152 tRNA synthetases class II (D, K and N) PF449_05590 PF01336 OB-fold nucleic acid binding domain PF449_05595 PF14052 Capsule assembly protein Wzi PF449_05605 PF01507 Phosphoadenosine phosphosulfate reductase family PF449_05610 PF00009 Elongation factor Tu GTP binding domain PF449_05625 PF03600 Citrate transporter PF449_05630 PF03471 Transporter associated domain PF449_05630 PF00571 CBS domain PF449_05630 PF01595 Cyclin M transmembrane N-terminal domain PF449_05635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_05635 PF03466 LysR substrate binding domain PF449_05640 PF00463 Isocitrate lyase family PF449_05655 PF01774 UreD urease accessory protein PF449_05660 PF00547 Urease, gamma subunit PF449_05665 PF00699 Urease beta subunit PF449_05670 PF01979 Amidohydrolase family PF449_05670 PF00449 Urease alpha-subunit, N-terminal domain PF449_05675 PF02814 UreE urease accessory protein, N-terminal domain PF449_05675 PF05194 UreE urease accessory protein, C-terminal domain PF449_05680 PF01730 UreF PF449_05685 PF02492 CobW/HypB/UreG, nucleotide-binding domain PF449_05700 PF03717 Penicillin-binding Protein dimerisation domain PF449_05700 PF00905 Penicillin binding protein transpeptidase domain PF449_05715 PF05191 Adenylate kinase, active site lid PF449_05725 PF00633 Helix-hairpin-helix motif PF449_05725 PF10576 Iron-sulfur binding domain of endonuclease III PF449_05725 PF00730 HhH-GPD superfamily base excision DNA repair protein PF449_05730 PF04060 Putative Fe-S cluster PF449_05735 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PF449_05735 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PF449_05745 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PF449_05750 PF02590 Predicted SPOUT methyltransferase PF449_05755 PF00004 ATPase family associated with various cellular activities (AAA) PF449_05755 PF05362 Lon protease (S16) C-terminal proteolytic domain PF449_05755 PF02190 ATP-dependent protease La (LON) substrate-binding domain PF449_05765 PF01812 5-formyltetrahydrofolate cyclo-ligase family PF449_05805 PF05195 Aminopeptidase P, N-terminal domain PF449_05805 PF00557 Metallopeptidase family M24 PF449_05810 PF01494 FAD binding domain PF449_05815 PF01494 FAD binding domain PF449_05825 PF13411 MerR HTH family regulatory protein PF449_05835 PF01810 LysE type translocator PF449_05840 PF03466 LysR substrate binding domain PF449_05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_05850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PF449_05855 PF02021 Uncharacterised protein family UPF0102 PF449_05860 PF04972 BON domain PF449_05870 PF00293 NUDIX domain PF449_05870 PF09297 NADH pyrophosphatase zinc ribbon domain PF449_05880 PF00929 Exonuclease PF449_05885 PF01476 LysM domain PF449_05885 PF01464 Transglycosylase SLT domain PF449_05885 PF01476 LysM domain PF449_05885 PF01464 Transglycosylase SLT domain PF449_05890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PF449_05895 PF00528 Binding-protein-dependent transport system inner membrane component PF449_05900 PF00528 Binding-protein-dependent transport system inner membrane component PF449_05900 PF12911 N-terminal TM domain of oligopeptide transport permease C PF449_05905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PF449_05905 PF00005 ABC transporter PF449_05910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF449_05910 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_05920 PF07715 TonB-dependent Receptor Plug Domain PF449_05920 PF00593 TonB dependent receptor PF449_05930 PF00929 Exonuclease PF449_05935 PF01979 Amidohydrolase family PF449_05940 PF00360 Phytochrome region PF449_05940 PF00563 EAL domain PF449_05940 PF01590 GAF domain PF449_05940 PF00990 Diguanylate cyclase, GGDEF domain PF449_05945 PF00764 Arginosuccinate synthase PF449_05950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF449_05950 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_05965 PF05987 Bacterial protein of unknown function (DUF898) PF449_05970 PF03180 NLPA lipoprotein PF449_05980 PF04717 Type VI secretion system, phage-baseplate injector PF449_05980 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PF449_05980 PF13296 Putative type VI secretion system Rhs element Vgr PF449_05985 PF05593 RHS Repeat PF449_05985 PF03527 RHS protein PF449_06025 PF00324 Amino acid permease PF449_06030 PF01266 FAD dependent oxidoreductase PF449_06035 PF00324 Amino acid permease PF449_06045 PF07729 FCD domain PF449_06045 PF00392 Bacterial regulatory proteins, gntR family PF449_06055 PF00171 Aldehyde dehydrogenase family PF449_06065 PF00202 Aminotransferase class-III PF449_06070 PF04958 Arginine N-succinyltransferase beta subunit PF449_06075 PF00324 Amino acid permease PF449_06100 PF00171 Aldehyde dehydrogenase family PF449_06120 PF00892 EamA-like transporter family PF449_06125 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PF449_06125 PF08666 SAF domain PF449_06130 PF07690 Major Facilitator Superfamily PF449_06135 PF13378 Enolase C-terminal domain-like PF449_06140 PF00701 Dihydrodipicolinate synthetase family PF449_06145 PF00171 Aldehyde dehydrogenase family PF449_06150 PF07729 FCD domain PF449_06150 PF00392 Bacterial regulatory proteins, gntR family PF449_06155 PF07519 Tannase and feruloyl esterase PF449_06170 PF03573 outer membrane porin, OprD family PF449_06175 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_06175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_06175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_06185 PF00171 Aldehyde dehydrogenase family PF449_06190 PF00378 Enoyl-CoA hydratase/isomerase PF449_06195 PF07690 Major Facilitator Superfamily PF449_06215 PF00111 2Fe-2S iron-sulfur cluster binding domain PF449_06215 PF00175 Oxidoreductase NAD-binding domain PF449_06220 PF00355 Rieske [2Fe-2S] domain PF449_06225 PF07690 Major Facilitator Superfamily PF449_06230 PF03573 outer membrane porin, OprD family PF449_06235 PF05199 GMC oxidoreductase PF449_06240 PF07859 alpha/beta hydrolase fold PF449_06245 PF00106 short chain dehydrogenase PF449_06250 PF00743 Flavin-binding monooxygenase-like PF449_06255 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF449_06255 PF12833 Helix-turn-helix domain PF449_06265 PF00743 Flavin-binding monooxygenase-like PF449_06270 PF00106 short chain dehydrogenase PF449_06280 PF17932 Tetracyclin repressor-like, C-terminal domain PF449_06280 PF00440 Bacterial regulatory proteins, tetR family PF449_06285 PF17954 Quercetinase C-terminal cupin domain PF449_06285 PF02678 Pirin PF449_06300 PF00106 short chain dehydrogenase PF449_06305 PF00743 Flavin-binding monooxygenase-like PF449_06315 PF00860 Permease family PF449_06320 PF00962 Adenosine/AMP deaminase PF449_06325 PF01292 Prokaryotic cytochrome b561 PF449_06345 PF01351 Ribonuclease HII PF449_06350 PF02599 Global regulator protein family PF449_06355 PF00696 Amino acid kinase family PF449_06355 PF01842 ACT domain PF449_06355 PF13840 ACT domain PF449_06360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PF449_06360 PF02272 DHHA1 domain PF449_06360 PF01411 tRNA synthetases class II (A) PF449_06365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PF449_06365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PF449_06375 PF13393 Histidyl-tRNA synthetase PF449_06380 PF00709 Adenylosuccinate synthetase PF449_06395 PF00248 Aldo/keto reductase family PF449_06400 PF00027 Cyclic nucleotide-binding domain PF449_06400 PF13545 Crp-like helix-turn-helix domain PF449_06410 PF02566 OsmC-like protein PF449_06425 PF10431 C-terminal, D2-small domain, of ClpB protein PF449_06425 PF02861 Clp amino terminal domain, pathogenicity island component PF449_06425 PF07724 AAA domain (Cdc48 subfamily) PF449_06425 PF00004 ATPase family associated with various cellular activities (AAA) PF449_06425 PF17871 AAA lid domain PF449_06440 PF10672 S-adenosylmethionine-dependent methyltransferase PF449_06440 PF02926 THUMP domain PF449_06440 PF01170 Putative RNA methylase family UPF0020 PF449_06450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PF449_06450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PF449_06455 PF01979 Amidohydrolase family PF449_06460 PF00691 OmpA family PF449_06460 PF13488 Glycine zipper PF449_06470 PF00043 Glutathione S-transferase, C-terminal domain PF449_06470 PF13417 Glutathione S-transferase, N-terminal domain PF449_06630 PF02390 Putative methyltransferase PF449_06640 PF00043 Glutathione S-transferase, C-terminal domain PF449_06640 PF02798 Glutathione S-transferase, N-terminal domain PF449_06650 PF13192 Thioredoxin domain PF449_06650 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_06670 PF10417 C-terminal domain of 1-Cys peroxiredoxin PF449_06670 PF00578 AhpC/TSA family PF449_06675 PF00270 DEAD/DEAH box helicase PF449_06675 PF11898 Domain of unknown function (DUF3418) PF449_06675 PF04408 Helicase associated domain (HA2) PF449_06675 PF00271 Helicase conserved C-terminal domain PF449_06675 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PF449_06680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PF449_06680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PF449_06690 PF07690 Major Facilitator Superfamily PF449_06695 PF03594 Benzoate membrane transport protein PF449_06700 PF00106 short chain dehydrogenase PF449_06705 PF00175 Oxidoreductase NAD-binding domain PF449_06705 PF00111 2Fe-2S iron-sulfur cluster binding domain PF449_06705 PF00970 Oxidoreductase FAD-binding domain PF449_06715 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF449_06715 PF00355 Rieske [2Fe-2S] domain PF449_06725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_06725 PF03466 LysR substrate binding domain PF449_06735 PF00403 Heavy-metal-associated domain PF449_06740 PF09278 MerR, DNA binding PF449_06740 PF00376 MerR family regulatory protein PF449_06775 PF02601 Exonuclease VII, large subunit PF449_06775 PF13742 OB-fold nucleic acid binding domain PF449_06805 PF01810 LysE type translocator PF449_06810 PF00313 'Cold-shock' DNA-binding domain PF449_06820 PF14748 Pyrroline-5-carboxylate reductase dimerisation PF449_06820 PF03807 NADP oxidoreductase coenzyme F420-dependent PF449_06845 PF07690 Major Facilitator Superfamily PF449_06850 PF01638 HxlR-like helix-turn-helix PF449_06880 PF01406 tRNA synthetases class I (C) catalytic domain PF449_06880 PF09190 DALR domain PF449_06885 PF00571 CBS domain PF449_06885 PF01380 SIS domain PF449_06900 PF03968 OstA-like protein PF449_06905 PF00005 ABC transporter PF449_06905 PF12399 Branched-chain amino acid ATP-binding cassette transporter PF449_06910 PF02321 Outer membrane efflux protein PF449_06915 PF00664 ABC transporter transmembrane region PF449_06915 PF00005 ABC transporter PF449_06915 PF03412 Peptidase C39 family PF449_06925 PF01205 Uncharacterized protein family UPF0029 PF449_06930 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_06940 PF01596 O-methyltransferase PF449_06950 PF11953 Domain of unknown function (DUF3470) PF449_06950 PF00037 4Fe-4S binding domain PF449_06960 PF05188 MutS domain II PF449_06960 PF05192 MutS domain III PF449_06960 PF05190 MutS family domain IV PF449_06960 PF00488 MutS domain V PF449_06960 PF01624 MutS domain I PF449_06965 PF01037 Lrp/AsnC ligand binding domain PF449_06970 PF00892 EamA-like transporter family PF449_06975 PF00990 Diguanylate cyclase, GGDEF domain PF449_06975 PF00563 EAL domain PF449_06975 PF03707 Bacterial signalling protein N terminal repeat PF449_06980 PF03279 Bacterial lipid A biosynthesis acyltransferase PF449_06990 PF01544 CorA-like Mg2+ transporter protein PF449_07010 PF07690 Major Facilitator Superfamily PF449_07015 PF01177 Asp/Glu/Hydantoin racemase PF449_07020 PF00291 Pyridoxal-phosphate dependent enzyme PF449_07025 PF00005 ABC transporter PF449_07030 PF00528 Binding-protein-dependent transport system inner membrane component PF449_07055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF449_07055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF449_07080 PF04717 Type VI secretion system, phage-baseplate injector PF449_07080 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PF449_07080 PF13296 Putative type VI secretion system Rhs element Vgr PF449_07085 PF03527 RHS protein PF449_07085 PF05593 RHS Repeat PF449_07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_07115 PF01566 Natural resistance-associated macrophage protein PF449_07120 PF03746 LamB/YcsF family PF449_07125 PF07286 Protein of unknown function (DUF1445) PF449_07135 PF00289 Biotin carboxylase, N-terminal domain PF449_07135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF449_07135 PF02785 Biotin carboxylase C-terminal domain PF449_07135 PF00364 Biotin-requiring enzyme PF449_07140 PF00654 Voltage gated chloride channel PF449_07180 PF00440 Bacterial regulatory proteins, tetR family PF449_07190 PF13823 Alcohol dehydrogenase GroES-associated PF449_07190 PF00107 Zinc-binding dehydrogenase PF449_07190 PF08240 Alcohol dehydrogenase GroES-like domain PF449_07205 PF02785 Biotin carboxylase C-terminal domain PF449_07205 PF00289 Biotin carboxylase, N-terminal domain PF449_07205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF449_07210 PF02525 Flavodoxin-like fold PF449_07215 PF01638 HxlR-like helix-turn-helix PF449_07225 PF08753 NikR C terminal nickel binding domain PF449_07225 PF01402 Ribbon-helix-helix protein, copG family PF449_07230 PF01425 Amidase PF449_07235 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF449_07240 PF00005 ABC transporter PF449_07270 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath PF449_07285 PF05947 Type VI secretion system, TssF PF449_07300 PF06744 Type VI secretion protein IcmF C-terminal PF449_07300 PF14331 ImcF-related N-terminal domain PF449_07300 PF06761 Intracellular multiplication and human macrophage-killing PF449_07310 PF00691 OmpA family PF449_07310 PF01389 OmpA-like transmembrane domain PF449_07320 PF00004 ATPase family associated with various cellular activities (AAA) PF449_07320 PF07724 AAA domain (Cdc48 subfamily) PF449_07320 PF17871 AAA lid domain PF449_07320 PF10431 C-terminal, D2-small domain, of ClpB protein PF449_07325 PF06812 ImpA, N-terminal, type VI secretion system PF449_07330 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE PF449_07350 PF03466 LysR substrate binding domain PF449_07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_07360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PF449_07365 PF07690 Major Facilitator Superfamily PF449_07380 PF02677 Epoxyqueuosine reductase QueH PF449_07390 PF09278 MerR, DNA binding PF449_07390 PF00376 MerR family regulatory protein PF449_07400 PF00701 Dihydrodipicolinate synthetase family PF449_07410 PF00392 Bacterial regulatory proteins, gntR family PF449_07415 PF05544 Proline racemase PF449_07420 PF01266 FAD dependent oxidoreductase PF449_07430 PF04324 BFD-like [2Fe-2S] binding domain PF449_07430 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_07440 PF00083 Sugar (and other) transporter PF449_07445 PF00171 Aldehyde dehydrogenase family PF449_07450 PF13520 Amino acid permease PF449_07455 PF03315 Serine dehydratase beta chain PF449_07455 PF03313 Serine dehydratase alpha chain PF449_07460 PF01575 MaoC like domain PF449_07460 PF00171 Aldehyde dehydrogenase family PF449_07465 PF05138 Phenylacetic acid catabolic protein PF449_07470 PF06243 Phenylacetic acid degradation B PF449_07475 PF05138 Phenylacetic acid catabolic protein PF449_07480 PF01883 Iron-sulfur cluster assembly protein PF449_07485 PF00970 Oxidoreductase FAD-binding domain PF449_07485 PF00111 2Fe-2S iron-sulfur cluster binding domain PF449_07485 PF00175 Oxidoreductase NAD-binding domain PF449_07490 PF00378 Enoyl-CoA hydratase/isomerase PF449_07495 PF00378 Enoyl-CoA hydratase/isomerase PF449_07500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF449_07500 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain PF449_07500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF449_07505 PF00108 Thiolase, N-terminal domain PF449_07505 PF02803 Thiolase, C-terminal domain PF449_07510 PF14535 AMP-binding enzyme C-terminal domain PF449_07510 PF00501 AMP-binding enzyme PF449_07515 PF07848 PaaX-like protein PF449_07515 PF08223 PaaX-like protein C-terminal domain PF449_07520 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_07525 PF03061 Thioesterase superfamily PF449_07530 PF13086 AAA domain PF449_07530 PF13087 AAA domain PF449_07530 PF13195 Protein of unknown function (DUF4011) PF449_07530 PF13195 Protein of unknown function (DUF4011) PF449_07530 PF13087 AAA domain PF449_07530 PF13086 AAA domain PF449_07540 PF00300 Histidine phosphatase superfamily (branch 1) PF449_07560 PF00199 Catalase PF449_07565 PF01292 Prokaryotic cytochrome b561 PF449_07590 PF12697 Alpha/beta hydrolase family PF449_07595 PF01613 Flavin reductase like domain PF449_07600 PF00296 Luciferase-like monooxygenase PF449_07605 PF00171 Aldehyde dehydrogenase family PF449_07615 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PF449_07625 PF00171 Aldehyde dehydrogenase family PF449_07630 PF02627 Carboxymuconolactone decarboxylase family PF449_07635 PF03466 LysR substrate binding domain PF449_07635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_07640 PF02525 Flavodoxin-like fold PF449_07645 PF09339 IclR helix-turn-helix domain PF449_07645 PF01614 Bacterial transcriptional regulator PF449_07650 PF01494 FAD binding domain PF449_07655 PF00842 Alanine racemase, C-terminal domain PF449_07655 PF01168 Alanine racemase, N-terminal domain PF449_07660 PF00392 Bacterial regulatory proteins, gntR family PF449_07660 PF07702 UTRA domain PF449_07670 PF08402 TOBE domain PF449_07670 PF00005 ABC transporter PF449_07675 PF00528 Binding-protein-dependent transport system inner membrane component PF449_07680 PF01266 FAD dependent oxidoreductase PF449_07685 PF00266 Aminotransferase class-V PF449_07690 PF13419 Haloacid dehalogenase-like hydrolase PF449_07695 PF01810 LysE type translocator PF449_07710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_07710 PF03466 LysR substrate binding domain PF449_07715 PF00682 HMGL-like PF449_07720 PF18140 Propionyl-coenzyme A carboxylase BT domain PF449_07720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF449_07720 PF02785 Biotin carboxylase C-terminal domain PF449_07720 PF00289 Biotin carboxylase, N-terminal domain PF449_07720 PF00364 Biotin-requiring enzyme PF449_07725 PF00378 Enoyl-CoA hydratase/isomerase PF449_07730 PF01039 Carboxyl transferase domain PF449_07735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_07735 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_07735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_07740 PF00440 Bacterial regulatory proteins, tetR family PF449_07745 PF13193 AMP-binding enzyme C-terminal domain PF449_07745 PF00501 AMP-binding enzyme PF449_07765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_07765 PF03466 LysR substrate binding domain PF449_07800 PF02464 Competence-damaged protein PF449_07800 PF00994 Probable molybdopterin binding domain PF449_07800 PF18146 Damage-inducible protein CinA KH domain PF449_07810 PF00199 Catalase PF449_07810 PF06628 Catalase-related immune-responsive PF449_07810 PF18011 C-terminal domain found in long catalases PF449_07835 PF00717 Peptidase S24-like PF449_07845 PF01037 Lrp/AsnC ligand binding domain PF449_07845 PF13404 AsnC-type helix-turn-helix domain PF449_07855 PF00072 Response regulator receiver domain PF449_07855 PF09308 LuxQ, periplasmic PF449_07855 PF00512 His Kinase A (phospho-acceptor) domain PF449_07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_07860 PF00072 Response regulator receiver domain PF449_07875 PF00528 Binding-protein-dependent transport system inner membrane component PF449_07880 PF00528 Binding-protein-dependent transport system inner membrane component PF449_07885 PF00005 ABC transporter PF449_07890 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF449_07895 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF449_07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_07905 PF03466 LysR substrate binding domain PF449_07910 PF01810 LysE type translocator PF449_07920 PF00266 Aminotransferase class-V PF449_07930 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_07935 PF00581 Rhodanese-like domain PF449_07945 PF03466 LysR substrate binding domain PF449_07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_07950 PF02798 Glutathione S-transferase, N-terminal domain PF449_07955 PF14834 Glutathione S-transferase, C-terminal domain PF449_07955 PF02798 Glutathione S-transferase, N-terminal domain PF449_07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_07960 PF03466 LysR substrate binding domain PF449_07965 PF03788 LrgA family PF449_07970 PF04172 LrgB-like family PF449_07975 PF00392 Bacterial regulatory proteins, gntR family PF449_07975 PF00155 Aminotransferase class I and II PF449_07990 PF07690 Major Facilitator Superfamily PF449_08000 PF03466 LysR substrate binding domain PF449_08000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_08005 PF16957 Malonate decarboxylase, alpha subunit, transporter PF449_08010 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase PF449_08015 PF06857 Malonate decarboxylase delta subunit (MdcD) PF449_08020 PF01039 Carboxyl transferase domain PF449_08030 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG PF449_08035 PF00698 Acyl transferase domain PF449_08055 PF03466 LysR substrate binding domain PF449_08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_08060 PF00392 Bacterial regulatory proteins, gntR family PF449_08060 PF00155 Aminotransferase class I and II PF449_08070 PF02322 Cytochrome bd terminal oxidase subunit II PF449_08075 PF01654 Cytochrome bd terminal oxidase subunit I PF449_08090 PF00296 Luciferase-like monooxygenase PF449_08095 PF00083 Sugar (and other) transporter PF449_08105 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PF449_08110 PF00005 ABC transporter PF449_08115 PF00528 Binding-protein-dependent transport system inner membrane component PF449_08120 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PF449_08125 PF01177 Asp/Glu/Hydantoin racemase PF449_08130 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PF449_08140 PF03466 LysR substrate binding domain PF449_08140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_08150 PF13382 Adenine deaminase C-terminal domain PF449_08150 PF01979 Amidohydrolase family PF449_08160 PF03960 ArsC family PF449_08165 PF01022 Bacterial regulatory protein, arsR family PF449_08170 PF01758 Sodium Bile acid symporter family PF449_08175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_08175 PF03466 LysR substrate binding domain PF449_08190 PF13192 Thioredoxin domain PF449_08190 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_08205 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_08210 PF00588 SpoU rRNA Methylase family PF449_08215 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PF449_08215 PF14579 Helix-hairpin-helix motif PF449_08215 PF02811 PHP domain PF449_08215 PF07733 Bacterial DNA polymerase III alpha NTPase domain PF449_08215 PF01336 OB-fold nucleic acid binding domain PF449_08220 PF00710 Asparaginase, N-terminal PF449_08220 PF17763 Glutaminase/Asparaginase C-terminal domain PF449_08225 PF00375 Sodium:dicarboxylate symporter family PF449_08230 PF00155 Aminotransferase class I and II PF449_08235 PF01641 SelR domain PF449_08240 PF00255 Glutathione peroxidase PF449_08245 PF12833 Helix-turn-helix domain PF449_08245 PF12852 Cupin PF449_08255 PF00155 Aminotransferase class I and II PF449_08260 PF01966 HD domain PF449_08260 PF08335 GlnD PII-uridylyltransferase PF449_08260 PF01909 Nucleotidyltransferase domain PF449_08265 PF02222 ATP-grasp domain PF449_08275 PF05437 Branched-chain amino acid transport protein (AzlD) PF449_08280 PF03591 AzlC protein PF449_08305 PF01926 50S ribosome-binding GTPase PF449_08305 PF06071 Protein of unknown function (DUF933) PF449_08310 PF00528 Binding-protein-dependent transport system inner membrane component PF449_08315 PF09383 NIL domain PF449_08315 PF00005 ABC transporter PF449_08320 PF03180 NLPA lipoprotein PF449_08325 PF03180 NLPA lipoprotein PF449_08330 PF00296 Luciferase-like monooxygenase PF449_08340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_08340 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF449_08355 PF00528 Binding-protein-dependent transport system inner membrane component PF449_08360 PF00528 Binding-protein-dependent transport system inner membrane component PF449_08365 PF00005 ABC transporter PF449_08375 PF01037 Lrp/AsnC ligand binding domain PF449_08380 PF01709 Transcriptional regulator PF449_08390 PF00440 Bacterial regulatory proteins, tetR family PF449_08410 PF03466 LysR substrate binding domain PF449_08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_08420 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PF449_08430 PF00892 EamA-like transporter family PF449_08450 PF00577 Outer membrane usher protein PF449_08450 PF13954 PapC N-terminal domain PF449_08450 PF13953 PapC C-terminal domain PF449_08455 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PF449_08455 PF02753 Pili assembly chaperone PapD, C-terminal domain PF449_08460 PF16970 Type-1 fimbrial protein, A PF449_08475 PF06968 Biotin and Thiamin Synthesis associated domain PF449_08475 PF04055 Radical SAM superfamily PF449_08480 PF08331 Domain of unknown function (DUF1730) PF449_08485 PF01256 Carbohydrate kinase PF449_08485 PF03853 YjeF-related protein N-terminus PF449_08490 PF02075 Crossover junction endodeoxyribonuclease RuvC PF449_08505 PF00905 Penicillin binding protein transpeptidase domain PF449_08525 PF02773 S-adenosylmethionine synthetase, C-terminal domain PF449_08525 PF02772 S-adenosylmethionine synthetase, central domain PF449_08525 PF00438 S-adenosylmethionine synthetase, N-terminal domain PF449_08530 PF00456 Transketolase, thiamine diphosphate binding domain PF449_08530 PF02780 Transketolase, C-terminal domain PF449_08530 PF02779 Transketolase, pyrimidine binding domain PF449_08540 PF04264 YceI-like domain PF449_08550 PF09992 Phosphodiester glycosidase PF449_08560 PF05958 tRNA (Uracil-5-)-methyltransferase PF449_08565 PF04229 GrpB protein PF449_08570 PF14850 DNA-binding domain of Proline dehydrogenase PF449_08570 PF00171 Aldehyde dehydrogenase family PF449_08570 PF01619 Proline dehydrogenase PF449_08570 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PF449_08575 PF01037 Lrp/AsnC ligand binding domain PF449_08580 PF00474 Sodium:solute symporter family PF449_08585 PF02146 Sir2 family PF449_08590 PF01597 Glycine cleavage H-protein PF449_08595 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF449_08595 PF12833 Helix-turn-helix domain PF449_08605 PF00005 ABC transporter PF449_08605 PF00664 ABC transporter transmembrane region PF449_08610 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) PF449_08615 PF06912 Protein of unknown function (DUF1275) PF449_08620 PF00375 Sodium:dicarboxylate symporter family PF449_08635 PF08007 Cupin superfamily protein PF449_08640 PF02545 Maf-like protein PF449_08650 PF00162 Phosphoglycerate kinase PF449_08660 PF01116 Fructose-bisphosphate aldolase class-II PF449_08665 PF09312 SurA N-terminal domain PF449_08665 PF00639 PPIC-type PPIASE domain PF449_08670 PF04453 LPS transport system D PF449_08670 PF03968 OstA-like protein PF449_08675 PF01636 Phosphotransferase enzyme family PF449_08680 PF00483 Nucleotidyl transferase PF449_08685 PF02527 rRNA small subunit methyltransferase G PF449_08690 PF13614 AAA domain PF449_08695 PF17762 HTH domain found in ParB protein PF449_08695 PF02195 ParB-like nuclease domain PF449_08700 PF01618 MotA/TolQ/ExbB proton channel family PF449_08710 PF00005 ABC transporter PF449_08710 PF00664 ABC transporter transmembrane region PF449_08715 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PF449_08720 PF02348 Cytidylyltransferase PF449_08725 PF09115 DNA polymerase III, delta subunit, C terminal PF449_08735 PF01026 TatD related DNase PF449_08750 PF07963 Prokaryotic N-terminal methylation motif PF449_08750 PF02501 Type II secretion system (T2SS), protein I PF449_08755 PF07963 Prokaryotic N-terminal methylation motif PF449_08755 PF11612 Type II secretion system (T2SS), protein J PF449_08760 PF03934 Type II secretion system (T2SS), protein K PF449_08770 PF03167 Uracil DNA glycosylase superfamily PF449_08780 PF14437 MafB19-like deaminase PF449_08790 PF02224 Cytidylate kinase PF449_08795 PF00575 S1 RNA binding domain PF449_08800 PF00216 Bacterial DNA-binding protein PF449_08810 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PF449_08820 PF00743 Flavin-binding monooxygenase-like PF449_08830 PF03969 AFG1-like ATPase PF449_08835 PF01274 Malate synthase PF449_08845 PF02472 Biopolymer transport protein ExbD/TolR PF449_08850 PF02472 Biopolymer transport protein ExbD/TolR PF449_08855 PF01618 MotA/TolQ/ExbB proton channel family PF449_08865 PF00593 TonB dependent receptor PF449_08865 PF07715 TonB-dependent Receptor Plug Domain PF449_08870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PF449_08880 PF01432 Peptidase family M3 PF449_08885 PF00528 Binding-protein-dependent transport system inner membrane component PF449_08890 PF00528 Binding-protein-dependent transport system inner membrane component PF449_08895 PF00005 ABC transporter PF449_08895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PF449_08910 PF00459 Inositol monophosphatase family PF449_08920 PF01649 Ribosomal protein S20 PF449_08940 PF03737 Aldolase/RraA PF449_08960 PF17757 UvrB interaction domain PF449_08960 PF03461 TRCF domain PF449_08960 PF00271 Helicase conserved C-terminal domain PF449_08960 PF00270 DEAD/DEAH box helicase PF449_08960 PF02559 CarD-like/TRCF domain PF449_08970 PF00211 Adenylate and Guanylate cyclase catalytic domain PF449_08975 PF00111 2Fe-2S iron-sulfur cluster binding domain PF449_08980 PF00012 Hsp70 protein PF449_08985 PF00226 DnaJ domain PF449_08985 PF07743 HSCB C-terminal oligomerisation domain PF449_08990 PF01521 Iron-sulphur cluster biosynthesis PF449_08995 PF01592 NifU-like N terminal domain PF449_09000 PF00266 Aminotransferase class-V PF449_09005 PF02082 Transcriptional regulator PF449_09020 PF00216 Bacterial DNA-binding protein PF449_09025 PF00639 PPIC-type PPIASE domain PF449_09025 PF09312 SurA N-terminal domain PF449_09030 PF12852 Cupin PF449_09030 PF12833 Helix-turn-helix domain PF449_09035 PF00487 Fatty acid desaturase PF449_09040 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_09040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_09040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_09045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_09045 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_09045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_09050 PF03109 ABC1 family PF449_09060 PF04073 Aminoacyl-tRNA editing domain PF449_09065 PF04183 IucA / IucC family PF449_09065 PF06276 Ferric iron reductase FhuF-like transporter PF449_09070 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PF449_09075 PF07690 Major Facilitator Superfamily PF449_09080 PF06276 Ferric iron reductase FhuF-like transporter PF449_09080 PF04183 IucA / IucC family PF449_09085 PF06276 Ferric iron reductase FhuF-like transporter PF449_09085 PF04183 IucA / IucC family PF449_09095 PF03737 Aldolase/RraA PF449_09100 PF00593 TonB dependent receptor PF449_09100 PF07715 TonB-dependent Receptor Plug Domain PF449_09125 PF13419 Haloacid dehalogenase-like hydrolase PF449_09135 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PF449_09140 PF02277 Phosphoribosyltransferase PF449_09145 PF00300 Histidine phosphatase superfamily (branch 1) PF449_09155 PF02654 Cobalamin-5-phosphate synthase PF449_09160 PF00793 DAHP synthetase I family PF449_09165 PF01925 Sulfite exporter TauE/SafE PF449_09185 PF00593 TonB dependent receptor PF449_09185 PF07715 TonB-dependent Receptor Plug Domain PF449_09190 PF02684 Lipid-A-disaccharide synthetase PF449_09200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF449_09205 PF00005 ABC transporter PF449_09240 PF01230 HIT domain PF449_09270 PF08241 Methyltransferase domain PF449_09275 PF00561 alpha/beta hydrolase fold PF449_09280 PF01053 Cys/Met metabolism PLP-dependent enzyme PF449_09290 PF02575 YbaB/EbfC DNA-binding family PF449_09295 PF02132 RecR protein PF449_09295 PF13662 Toprim domain PF449_09300 PF01612 3'-5' exonuclease PF449_09300 PF00570 HRDC domain PF449_09320 PF05166 YcgL domain PF449_09330 PF01434 Peptidase family M41 PF449_09330 PF17862 AAA+ lid domain PF449_09330 PF00004 ATPase family associated with various cellular activities (AAA) PF449_09340 PF00291 Pyridoxal-phosphate dependent enzyme PF449_09345 PF05175 Methyltransferase small domain PF449_09350 PF01264 Chorismate synthase PF449_09355 PF08448 PAS fold PF449_09355 PF00990 Diguanylate cyclase, GGDEF domain PF449_09370 PF04055 Radical SAM superfamily PF449_09375 PF00676 Dehydrogenase E1 component PF449_09380 PF02780 Transketolase, C-terminal domain PF449_09380 PF02779 Transketolase, pyrimidine binding domain PF449_09385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PF449_09385 PF00364 Biotin-requiring enzyme PF449_09385 PF02817 e3 binding domain PF449_09390 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_09390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF449_09395 PF00106 short chain dehydrogenase PF449_09400 PF08240 Alcohol dehydrogenase GroES-like domain PF449_09400 PF00107 Zinc-binding dehydrogenase PF449_09405 PF01062 Bestrophin, RFP-TM, chloride channel PF449_09410 PF00072 Response regulator receiver domain PF449_09410 PF02954 Bacterial regulatory protein, Fis family PF449_09410 PF00158 Sigma-54 interaction domain PF449_09415 PF04273 Putative phosphatase (DUF442) PF449_09415 PF00753 Metallo-beta-lactamase superfamily PF449_09430 PF01925 Sulfite exporter TauE/SafE PF449_09445 PF12833 Helix-turn-helix domain PF449_09445 PF06445 GyrI-like small molecule binding domain PF449_09450 PF01638 HxlR-like helix-turn-helix PF449_09455 PF02525 Flavodoxin-like fold PF449_09475 PF00392 Bacterial regulatory proteins, gntR family PF449_09475 PF07702 UTRA domain PF449_09490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PF449_09495 PF00528 Binding-protein-dependent transport system inner membrane component PF449_09500 PF00005 ABC transporter PF449_09515 PF00083 Sugar (and other) transporter PF449_09520 PF00593 TonB dependent receptor PF449_09520 PF07715 TonB-dependent Receptor Plug Domain PF449_09525 PF00206 Lyase PF449_09525 PF10415 Fumarase C C-terminus PF449_09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_09540 PF03466 LysR substrate binding domain PF449_09545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_09545 PF03466 LysR substrate binding domain PF449_09550 PF02803 Thiolase, C-terminal domain PF449_09550 PF00108 Thiolase, N-terminal domain PF449_09555 PF02667 Short chain fatty acid transporter PF449_09560 PF01144 Coenzyme A transferase PF449_09565 PF01144 Coenzyme A transferase PF449_09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_09570 PF03466 LysR substrate binding domain PF449_09590 PF06719 AraC-type transcriptional regulator N-terminus PF449_09590 PF12833 Helix-turn-helix domain PF449_09595 PF07690 Major Facilitator Superfamily PF449_09600 PF01738 Dienelactone hydrolase family PF449_09615 PF01613 Flavin reductase like domain PF449_09625 PF12833 Helix-turn-helix domain PF449_09625 PF14525 AraC-binding-like domain PF449_09630 PF00175 Oxidoreductase NAD-binding domain PF449_09630 PF00111 2Fe-2S iron-sulfur cluster binding domain PF449_09630 PF00970 Oxidoreductase FAD-binding domain PF449_09635 PF00866 Ring hydroxylating beta subunit PF449_09640 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF449_09640 PF00355 Rieske [2Fe-2S] domain PF449_09645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_09645 PF03459 TOBE domain PF449_09655 PF00528 Binding-protein-dependent transport system inner membrane component PF449_09660 PF03459 TOBE domain PF449_09660 PF00005 ABC transporter PF449_09665 PF00106 short chain dehydrogenase PF449_09670 PF00857 Isochorismatase family PF449_09670 PF00550 Phosphopantetheine attachment site PF449_09680 PF00149 Calcineurin-like phosphoesterase PF449_09685 PF13089 Polyphosphate kinase N-terminal domain PF449_09685 PF17941 Polyphosphate kinase C-terminal domain 1 PF449_09685 PF13090 Polyphosphate kinase C-terminal domain 2 PF449_09685 PF02503 Polyphosphate kinase middle domain PF449_09690 PF08042 PqqA family PF449_09695 PF12706 Beta-lactamase superfamily domain PF449_09700 PF03070 TENA/THI-4/PQQC family PF449_09705 PF05402 Coenzyme PQQ synthesis protein D (PqqD) PF449_09710 PF13186 Iron-sulfur cluster-binding domain PF449_09710 PF04055 Radical SAM superfamily PF449_09715 PF01244 Membrane dipeptidase (Peptidase family M19) PF449_09730 PF13091 PLD-like domain PF449_09745 PF00199 Catalase PF449_09755 PF08240 Alcohol dehydrogenase GroES-like domain PF449_09755 PF00107 Zinc-binding dehydrogenase PF449_09785 PF07993 Male sterility protein PF449_09785 PF00550 Phosphopantetheine attachment site PF449_09790 PF07690 Major Facilitator Superfamily PF449_09795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_09815 PF01975 Survival protein SurE PF449_09840 PF07690 Major Facilitator Superfamily PF449_09845 PF13533 Biotin-lipoyl like PF449_09865 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PF449_09870 PF14572 Phosphoribosyl synthetase-associated domain PF449_09870 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PF449_09890 PF00005 ABC transporter PF449_09895 PF01032 FecCD transport family PF449_09905 PF08240 Alcohol dehydrogenase GroES-like domain PF449_09905 PF00107 Zinc-binding dehydrogenase PF449_09920 PF12833 Helix-turn-helix domain PF449_09920 PF06719 AraC-type transcriptional regulator N-terminus PF449_09925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PF449_09925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PF449_09930 PF07690 Major Facilitator Superfamily PF449_09935 PF01370 NAD dependent epimerase/dehydratase family PF449_09940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_09940 PF03466 LysR substrate binding domain PF449_09950 PF00920 Dehydratase family PF449_09955 PF00171 Aldehyde dehydrogenase family PF449_09960 PF01047 MarR family PF449_09965 PF01613 Flavin reductase like domain PF449_09970 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF449_09975 PF07690 Major Facilitator Superfamily PF449_09975 PF00083 Sugar (and other) transporter PF449_09980 PF00171 Aldehyde dehydrogenase family PF449_09985 PF03328 HpcH/HpaI aldolase/citrate lyase family PF449_09990 PF01557 Fumarylacetoacetate (FAA) hydrolase family PF449_09995 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase PF449_10000 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PF449_10005 PF00171 Aldehyde dehydrogenase family PF449_10010 PF01557 Fumarylacetoacetate (FAA) hydrolase family PF449_10015 PF01557 Fumarylacetoacetate (FAA) hydrolase family PF449_10025 PF07690 Major Facilitator Superfamily PF449_10030 PF00579 tRNA synthetases class I (W and Y) PF449_10045 PF00171 Aldehyde dehydrogenase family PF449_10065 PF01266 FAD dependent oxidoreductase PF449_10075 PF00893 Small Multidrug Resistance protein PF449_10085 PF01266 FAD dependent oxidoreductase PF449_10090 PF12833 Helix-turn-helix domain PF449_10090 PF00072 Response regulator receiver domain PF449_10105 PF13533 Biotin-lipoyl like PF449_10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_10120 PF03466 LysR substrate binding domain PF449_10130 PF08450 SMP-30/Gluconolactonase/LRE-like region PF449_10135 PF00392 Bacterial regulatory proteins, gntR family PF449_10135 PF07702 UTRA domain PF449_10145 PF04909 Amidohydrolase PF449_10150 PF07690 Major Facilitator Superfamily PF449_10155 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) PF449_10190 PF01546 Peptidase family M20/M25/M40 PF449_10190 PF07687 Peptidase dimerisation domain PF449_10200 PF00999 Sodium/hydrogen exchanger family PF449_10200 PF02254 TrkA-N domain PF449_10205 PF07995 Glucose / Sorbosone dehydrogenase PF449_10210 PF03466 LysR substrate binding domain PF449_10210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_10215 PF00857 Isochorismatase family PF449_10225 PF08359 YsiA-like protein, C-terminal region PF449_10225 PF00440 Bacterial regulatory proteins, tetR family PF449_10230 PF12706 Beta-lactamase superfamily domain PF449_10240 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_10250 PF00376 MerR family regulatory protein PF449_10250 PF09278 MerR, DNA binding PF449_10260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF449_10260 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_10265 PF01047 MarR family PF449_10270 PF07859 alpha/beta hydrolase fold PF449_10285 PF06628 Catalase-related immune-responsive PF449_10285 PF00199 Catalase PF449_10290 PF00561 alpha/beta hydrolase fold PF449_10300 PF00171 Aldehyde dehydrogenase family PF449_10305 PF00107 Zinc-binding dehydrogenase PF449_10305 PF08240 Alcohol dehydrogenase GroES-like domain PF449_10310 PF00474 Sodium:solute symporter family PF449_10315 PF04341 Protein of unknown function, DUF485 PF449_10320 PF13193 AMP-binding enzyme C-terminal domain PF449_10320 PF00501 AMP-binding enzyme PF449_10325 PF00158 Sigma-54 interaction domain PF449_10325 PF06506 Propionate catabolism activator PF449_10325 PF02954 Bacterial regulatory protein, Fis family PF449_10335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_10335 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_10335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_10350 PF01636 Phosphotransferase enzyme family PF449_10355 PF00171 Aldehyde dehydrogenase family PF449_10365 PF07690 Major Facilitator Superfamily PF449_10370 PF00920 Dehydratase family PF449_10375 PF07729 FCD domain PF449_10375 PF00392 Bacterial regulatory proteins, gntR family PF449_10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_10385 PF03466 LysR substrate binding domain PF449_10390 PF13378 Enolase C-terminal domain-like PF449_10390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PF449_10395 PF02426 Muconolactone delta-isomerase PF449_10400 PF00775 Dioxygenase PF449_10400 PF04444 Catechol dioxygenase N terminus PF449_10405 PF01144 Coenzyme A transferase PF449_10410 PF01144 Coenzyme A transferase PF449_10415 PF02803 Thiolase, C-terminal domain PF449_10415 PF00108 Thiolase, N-terminal domain PF449_10420 PF12146 Serine aminopeptidase, S33 PF449_10425 PF01804 Penicillin amidase PF449_10430 PF00171 Aldehyde dehydrogenase family PF449_10440 PF02728 Copper amine oxidase, N3 domain PF449_10440 PF07833 Copper amine oxidase N-terminal domain PF449_10440 PF02727 Copper amine oxidase, N2 domain PF449_10440 PF01179 Copper amine oxidase, enzyme domain PF449_10445 PF02311 AraC-like ligand binding domain PF449_10445 PF12833 Helix-turn-helix domain PF449_10450 PF01613 Flavin reductase like domain PF449_10455 PF00175 Oxidoreductase NAD-binding domain PF449_10455 PF00111 2Fe-2S iron-sulfur cluster binding domain PF449_10470 PF00355 Rieske [2Fe-2S] domain PF449_10470 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF449_10485 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF449_10490 PF01425 Amidase PF449_10500 PF07690 Major Facilitator Superfamily PF449_10510 PF00106 short chain dehydrogenase PF449_10525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_10525 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_10525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_10530 PF03466 LysR substrate binding domain PF449_10530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_10535 PF01614 Bacterial transcriptional regulator PF449_10535 PF09339 IclR helix-turn-helix domain PF449_10540 PF00753 Metallo-beta-lactamase superfamily PF449_10550 PF04143 Sulphur transport PF449_10560 PF13360 PQQ-like domain PF449_10560 PF01011 PQQ enzyme repeat PF449_10565 PF04966 Carbohydrate-selective porin, OprB family PF449_10570 PF05048 Periplasmic copper-binding protein (NosD) PF449_10575 PF01487 Type I 3-dehydroquinase PF449_10580 PF00775 Dioxygenase PF449_10585 PF00775 Dioxygenase PF449_10585 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal PF449_10590 PF02627 Carboxymuconolactone decarboxylase family PF449_10595 PF07690 Major Facilitator Superfamily PF449_10600 PF00561 alpha/beta hydrolase fold PF449_10605 PF10397 Adenylosuccinate lyase C-terminus PF449_10605 PF00206 Lyase PF449_10610 PF00108 Thiolase, N-terminal domain PF449_10610 PF02803 Thiolase, C-terminal domain PF449_10615 PF01144 Coenzyme A transferase PF449_10620 PF01144 Coenzyme A transferase PF449_10625 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PF449_10630 PF04977 Septum formation initiator PF449_10635 PF04239 Protein of unknown function (DUF421) PF449_10640 PF00113 Enolase, C-terminal TIM barrel domain PF449_10640 PF03952 Enolase, N-terminal domain PF449_10645 PF00793 DAHP synthetase I family PF449_10650 PF00117 Glutamine amidotransferase class-I PF449_10650 PF06418 CTP synthase N-terminus PF449_10680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF449_10680 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_10695 PF00793 DAHP synthetase I family PF449_10700 PF02694 Uncharacterised BCR, YnfA/UPF0060 family PF449_10705 PF00004 ATPase family associated with various cellular activities (AAA) PF449_10705 PF17871 AAA lid domain PF449_10705 PF02861 Clp amino terminal domain, pathogenicity island component PF449_10705 PF10431 C-terminal, D2-small domain, of ClpB protein PF449_10705 PF07724 AAA domain (Cdc48 subfamily) PF449_10710 PF02617 ATP-dependent Clp protease adaptor protein ClpS PF449_10720 PF01118 Semialdehyde dehydrogenase, NAD binding domain PF449_10720 PF02774 Semialdehyde dehydrogenase, dimerisation domain PF449_10735 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PF449_10740 PF00291 Pyridoxal-phosphate dependent enzyme PF449_10740 PF00585 C-terminal regulatory domain of Threonine dehydratase PF449_10745 PF02080 TrkA-C domain PF449_10745 PF02254 TrkA-N domain PF449_10750 PF02386 Cation transport protein PF449_10755 PF02253 Phospholipase A1 PF449_10760 PF00675 Insulinase (Peptidase family M16) PF449_10760 PF05193 Peptidase M16 inactive domain PF449_10760 PF08367 Peptidase M16C associated PF449_10765 PF00593 TonB dependent receptor PF449_10765 PF07715 TonB-dependent Receptor Plug Domain PF449_10770 PF00294 pfkB family carbohydrate kinase PF449_10780 PF07290 Protein of unknown function (DUF1449) PF449_10790 PF01654 Cytochrome bd terminal oxidase subunit I PF449_10795 PF02322 Cytochrome bd terminal oxidase subunit II PF449_10800 PF08173 Membrane bound YbgT-like protein PF449_10810 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) PF449_10820 PF02881 SRP54-type protein, helical bundle domain PF449_10820 PF00448 SRP54-type protein, GTPase domain PF449_10845 PF00478 IMP dehydrogenase / GMP reductase domain PF449_10845 PF00571 CBS domain PF449_10850 PF00202 Aminotransferase class-III PF449_10855 PF00462 Glutaredoxin PF449_10865 PF03466 LysR substrate binding domain PF449_10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_10870 PF00557 Metallopeptidase family M24 PF449_10875 PF05525 Branched-chain amino acid transport protein PF449_10900 PF05524 PEP-utilising enzyme, N-terminal PF449_10900 PF00391 PEP-utilising enzyme, mobile domain PF449_10900 PF02896 PEP-utilising enzyme, TIM barrel domain PF449_10900 PF00381 PTS HPr component phosphorylation site PF449_10900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PF449_10905 PF00294 pfkB family carbohydrate kinase PF449_10910 PF02378 Phosphotransferase system, EIIC PF449_10910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PF449_10930 PF00563 EAL domain PF449_10930 PF00990 Diguanylate cyclase, GGDEF domain PF449_10930 PF03707 Bacterial signalling protein N terminal repeat PF449_10940 PF07995 Glucose / Sorbosone dehydrogenase PF449_10945 PF02586 SOS response associated peptidase (SRAP) PF449_10950 PF01740 STAS domain PF449_10950 PF00916 Sulfate permease family PF449_10955 PF05922 Peptidase inhibitor I9 PF449_10955 PF00082 Subtilase family PF449_10970 PF00324 Amino acid permease PF449_10975 PF00266 Aminotransferase class-V PF449_10980 PF01037 Lrp/AsnC ligand binding domain PF449_11005 PF13419 Haloacid dehalogenase-like hydrolase PF449_11010 PF01479 S4 domain PF449_11015 PF00154 recA bacterial DNA recombination protein PF449_11020 PF02631 RecX family PF449_11035 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PF449_11035 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_11040 PF07977 FabA-like domain PF449_11045 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PF449_11045 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_11055 PF01103 Surface antigen PF449_11055 PF07244 Surface antigen variable number repeat PF449_11060 PF13180 PDZ domain PF449_11060 PF17820 PDZ domain PF449_11060 PF02163 Peptidase family M50 PF449_11065 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PF449_11065 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PF449_11065 PF13288 DXP reductoisomerase C-terminal domain PF449_11075 PF01255 Putative undecaprenyl diphosphate synthase PF449_11080 PF01765 Ribosome recycling factor PF449_11085 PF00696 Amino acid kinase family PF449_11090 PF00919 Uncharacterized protein family UPF0004 PF449_11090 PF04055 Radical SAM superfamily PF449_11090 PF18693 TRAM domain PF449_11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_11095 PF00512 His Kinase A (phospho-acceptor) domain PF449_11095 PF00989 PAS fold PF449_11100 PF02954 Bacterial regulatory protein, Fis family PF449_11100 PF00072 Response regulator receiver domain PF449_11100 PF00158 Sigma-54 interaction domain PF449_11110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PF449_11110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PF449_11120 PF02542 YgbB family PF449_11130 PF01266 FAD dependent oxidoreductase PF449_11150 PF00206 Lyase PF449_11150 PF10415 Fumarase C C-terminus PF449_11155 PF16363 GDP-mannose 4,6 dehydratase PF449_11160 PF02635 DsrE/DsrF-like family PF449_11180 PF00892 EamA-like transporter family PF449_11185 PF00392 Bacterial regulatory proteins, gntR family PF449_11185 PF00155 Aminotransferase class I and II PF449_11190 PF01638 HxlR-like helix-turn-helix PF449_11195 PF03454 MoeA C-terminal region (domain IV) PF449_11195 PF00994 Probable molybdopterin binding domain PF449_11195 PF03453 MoeA N-terminal region (domain I and II) PF449_11200 PF00994 Probable molybdopterin binding domain PF449_11200 PF01967 MoaC family PF449_11205 PF02391 MoaE protein PF449_11215 PF04055 Radical SAM superfamily PF449_11215 PF06463 Molybdenum Cofactor Synthesis C PF449_11220 PF00384 Molybdopterin oxidoreductase PF449_11220 PF01568 Molydopterin dinucleotide binding domain PF449_11220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PF449_11225 PF12804 MobA-like NTP transferase domain PF449_11230 PF04324 BFD-like [2Fe-2S] binding domain PF449_11230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PF449_11230 PF00384 Molybdopterin oxidoreductase PF449_11230 PF01568 Molydopterin dinucleotide binding domain PF449_11235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PF449_11235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PF449_11235 PF04324 BFD-like [2Fe-2S] binding domain PF449_11235 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_11235 PF18267 Rubredoxin NAD+ reductase C-terminal domain PF449_11240 PF04324 BFD-like [2Fe-2S] binding domain PF449_11240 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PF449_11240 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PF449_11240 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_11240 PF13806 Rieske-like [2Fe-2S] domain PF449_11240 PF18267 Rubredoxin NAD+ reductase C-terminal domain PF449_11250 PF00072 Response regulator receiver domain PF449_11250 PF00486 Transcriptional regulatory protein, C terminal PF449_11255 PF00005 ABC transporter PF449_11265 PF13438 Domain of unknown function (DUF4113) PF449_11265 PF00817 impB/mucB/samB family PF449_11265 PF11799 impB/mucB/samB family C-terminal domain PF449_11270 PF01220 Dehydroquinase class II PF449_11275 PF00364 Biotin-requiring enzyme PF449_11280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF449_11280 PF00289 Biotin carboxylase, N-terminal domain PF449_11280 PF02785 Biotin carboxylase C-terminal domain PF449_11290 PF12832 MFS_1 like family PF449_11310 PF00182 Chitinase class I PF449_11500 PF02498 BRO family, N-terminal domain PF449_11500 PF10548 P22AR C-terminal domain PF449_11660 PF01645 Conserved region in glutamate synthase PF449_11675 PF01565 FAD binding domain PF449_11675 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PF449_11680 PF01451 Low molecular weight phosphotyrosine protein phosphatase PF449_11690 PF00465 Iron-containing alcohol dehydrogenase PF449_11695 PF03061 Thioesterase superfamily PF449_11700 PF05506 Domain of unknown function (DUF756) PF449_11700 PF04185 Phosphoesterase family PF449_11710 PF12169 DNA polymerase III subunits gamma and tau domain III PF449_11710 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PF449_11710 PF12170 DNA polymerase III tau subunit V interacting with alpha PF449_11715 PF07690 Major Facilitator Superfamily PF449_11725 PF00144 Beta-lactamase PF449_11730 PF01575 MaoC like domain PF449_11740 PF02803 Thiolase, C-terminal domain PF449_11740 PF00108 Thiolase, N-terminal domain PF449_11750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_11750 PF03466 LysR substrate binding domain PF449_11755 PF00923 Transaldolase/Fructose-6-phosphate aldolase PF449_11760 PF01810 LysE type translocator PF449_11765 PF01037 Lrp/AsnC ligand binding domain PF449_11770 PF03594 Benzoate membrane transport protein PF449_11775 PF02308 MgtC family PF449_11780 PF00689 Cation transporting ATPase, C-terminus PF449_11780 PF00690 Cation transporter/ATPase, N-terminus PF449_11805 PF00582 Universal stress protein family PF449_11810 PF00005 ABC transporter PF449_11810 PF12848 ABC transporter PF449_11830 PF00593 TonB dependent receptor PF449_11830 PF07715 TonB-dependent Receptor Plug Domain PF449_11860 PF00924 Mechanosensitive ion channel PF449_11865 PF07715 TonB-dependent Receptor Plug Domain PF449_11865 PF00593 TonB dependent receptor PF449_11870 PF00440 Bacterial regulatory proteins, tetR family PF449_11885 PF01037 Lrp/AsnC ligand binding domain PF449_11890 PF01817 Chorismate mutase type II PF449_11910 PF17432 Domain of unknown function (DUF3458_C) ARM repeats PF449_11910 PF01433 Peptidase family M1 domain PF449_11910 PF11940 Domain of unknown function (DUF3458) Ig-like fold PF449_11925 PF02110 Hydroxyethylthiazole kinase family PF449_11930 PF06445 GyrI-like small molecule binding domain PF449_11940 PF05970 PIF1-like helicase PF449_11940 PF14493 Helix-turn-helix domain PF449_11945 PF00465 Iron-containing alcohol dehydrogenase PF449_11960 PF00171 Aldehyde dehydrogenase family PF449_11965 PF13520 Amino acid permease PF449_11970 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PF449_11975 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PF449_11980 PF00117 Glutamine amidotransferase class-I PF449_11980 PF00958 GMP synthase C terminal domain PF449_11980 PF02540 NAD synthase PF449_11985 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PF449_11985 PF00749 tRNA synthetases class I (E and Q), catalytic domain PF449_11990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PF449_11995 PF00149 Calcineurin-like phosphoesterase PF449_12005 PF00881 Nitroreductase family PF449_12015 PF17209 Hfq protein PF449_12025 PF01119 DNA mismatch repair protein, C-terminal domain PF449_12025 PF08676 MutL C terminal dimerisation domain PF449_12030 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PF449_12035 PF00849 RNA pseudouridylate synthase PF449_12035 PF01479 S4 domain PF449_12050 PF00849 RNA pseudouridylate synthase PF449_12050 PF01479 S4 domain PF449_12060 PF04284 Protein of unknown function (DUF441) PF449_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_12065 PF03466 LysR substrate binding domain PF449_12080 PF07690 Major Facilitator Superfamily PF449_12085 PF00520 Ion transport protein PF449_12085 PF00027 Cyclic nucleotide-binding domain PF449_12095 PF00330 Aconitase family (aconitate hydratase) PF449_12095 PF06434 Aconitate hydratase 2 N-terminus PF449_12095 PF11791 Aconitate B N-terminal domain PF449_12110 PF17243 POTRA domain TamA domain 1 PF449_12110 PF07244 Surface antigen variable number repeat PF449_12110 PF01103 Surface antigen PF449_12115 PF07690 Major Facilitator Superfamily PF449_12120 PF03232 Ubiquinone biosynthesis protein COQ7 PF449_12130 PF00120 Glutamine synthetase, catalytic domain PF449_12135 PF00486 Transcriptional regulatory protein, C terminal PF449_12135 PF00072 Response regulator receiver domain PF449_12140 PF13493 Domain of unknown function (DUF4118) PF449_12140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_12140 PF00512 His Kinase A (phospho-acceptor) domain PF449_12140 PF02702 Osmosensitive K+ channel His kinase sensor domain PF449_12145 PF02669 K+-transporting ATPase, c chain PF449_12155 PF03814 Potassium-transporting ATPase A subunit PF449_12165 PF02152 Dihydroneopterin aldolase PF449_12170 PF03109 ABC1 family PF449_12175 PF00899 ThiF family PF449_12180 PF01613 Flavin reductase like domain PF449_12185 PF00501 AMP-binding enzyme PF449_12185 PF13193 AMP-binding enzyme C-terminal domain PF449_12190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_12190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_12190 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_12195 PF00106 short chain dehydrogenase PF449_12200 PF12833 Helix-turn-helix domain PF449_12205 PF09084 NMT1/THI5 like PF449_12210 PF00528 Binding-protein-dependent transport system inner membrane component PF449_12215 PF17827 PrmC N-terminal domain PF449_12215 PF13847 Methyltransferase domain PF449_12220 PF03462 PCRF domain PF449_12220 PF00472 RF-1 domain PF449_12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_12230 PF03466 LysR substrate binding domain PF449_12245 PF00296 Luciferase-like monooxygenase PF449_12255 PF13994 PgaD-like protein PF449_12260 PF00535 Glycosyl transferase family 2 PF449_12265 PF14883 Hypothetical glycosyl hydrolase family 13 PF449_12265 PF01522 Polysaccharide deacetylase PF449_12275 PF03618 Kinase/pyrophosphorylase PF449_12280 PF00391 PEP-utilising enzyme, mobile domain PF449_12280 PF02896 PEP-utilising enzyme, TIM barrel domain PF449_12280 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PF449_12290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PF449_12290 PF06481 COX Aromatic Rich Motif PF449_12295 PF00115 Cytochrome C and Quinol oxidase polypeptide I PF449_12300 PF00510 Cytochrome c oxidase subunit III PF449_12305 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PF449_12310 PF01040 UbiA prenyltransferase family PF449_12315 PF01250 Ribosomal protein S6 PF449_12320 PF01084 Ribosomal protein S18 PF449_12325 PF03948 Ribosomal protein L9, C-terminal domain PF449_12325 PF01281 Ribosomal protein L9, N-terminal domain PF449_12330 PF00772 DnaB-like helicase N terminal domain PF449_12330 PF03796 DnaB-like helicase C terminal domain PF449_12335 PF00842 Alanine racemase, C-terminal domain PF449_12335 PF01168 Alanine racemase, N-terminal domain PF449_12345 PF01841 Transglutaminase-like superfamily PF449_12345 PF08379 Bacterial transglutaminase-like N-terminal region PF449_12355 PF14403 Circularly permuted ATP-grasp type 2 PF449_12365 PF01134 Glucose inhibited division protein A PF449_12365 PF13932 GidA associated domain PF449_12385 PF02954 Bacterial regulatory protein, Fis family PF449_12390 PF01808 AICARFT/IMPCHase bienzyme PF449_12390 PF02142 MGS-like domain PF449_12395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PF449_12395 PF02843 Phosphoribosylglycinamide synthetase, C domain PF449_12395 PF02844 Phosphoribosylglycinamide synthetase, N domain PF449_12400 PF03180 NLPA lipoprotein PF449_12405 PF09383 NIL domain PF449_12405 PF00005 ABC transporter PF449_12410 PF00528 Binding-protein-dependent transport system inner membrane component PF449_12415 PF16123 Hydroxyacylglutathione hydrolase C-terminus PF449_12415 PF00753 Metallo-beta-lactamase superfamily PF449_12425 PF00375 Sodium:dicarboxylate symporter family PF449_12445 PF07995 Glucose / Sorbosone dehydrogenase PF449_12450 PF00892 EamA-like transporter family PF449_12455 PF01177 Asp/Glu/Hydantoin racemase PF449_12465 PF02470 MlaD protein PF449_12470 PF04403 Paraquat-inducible protein A PF449_12500 PF00083 Sugar (and other) transporter PF449_12500 PF08946 Osmosensory transporter coiled coil PF449_12510 PF00392 Bacterial regulatory proteins, gntR family PF449_12510 PF07729 FCD domain PF449_12520 PF03616 Sodium/glutamate symporter PF449_12525 PF00561 alpha/beta hydrolase fold PF449_12550 PF04076 Bacterial OB fold (BOF) protein PF449_12580 PF00324 Amino acid permease PF449_12585 PF00171 Aldehyde dehydrogenase family PF449_12590 PF00202 Aminotransferase class-III PF449_12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_12595 PF03466 LysR substrate binding domain PF449_12620 PF03793 PASTA domain PF449_12620 PF00069 Protein kinase domain PF449_12640 PF00814 Glycoprotease family PF449_12645 PF01165 Ribosomal protein S21 PF449_12650 PF09424 Yqey-like protein PF449_12655 PF01435 Peptidase family M48 PF449_12660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF449_12660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF449_12675 PF00156 Phosphoribosyl transferase domain PF449_12680 PF02674 Colicin V production protein PF449_12685 PF01180 Dihydroorotate dehydrogenase PF449_12705 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PF449_12705 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PF449_12710 PF00881 Nitroreductase family PF449_12720 PF00270 DEAD/DEAH box helicase PF449_12720 PF00271 Helicase conserved C-terminal domain PF449_12725 PF00313 'Cold-shock' DNA-binding domain PF449_12740 PF04545 Sigma-70, region 4 PF449_12740 PF00140 Sigma-70 factor, region 1.2 PF449_12740 PF04542 Sigma-70 region 2 PF449_12745 PF04241 Protein of unknown function (DUF423) PF449_12755 PF05690 Thiazole biosynthesis protein ThiG PF449_12765 PF03883 Peroxide stress protein YaaA PF449_12775 PF06956 Regulator of RNA terminal phosphate cyclase PF449_12775 PF00158 Sigma-54 interaction domain PF449_12780 PF00753 Metallo-beta-lactamase superfamily PF449_12785 PF01139 tRNA-splicing ligase RtcB PF449_12800 PF01137 RNA 3'-terminal phosphate cyclase PF449_12800 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain PF449_12805 PF07687 Peptidase dimerisation domain PF449_12805 PF01546 Peptidase family M20/M25/M40 PF449_12825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PF449_12830 PF01817 Chorismate mutase type II PF449_12830 PF01842 ACT domain PF449_12830 PF00800 Prephenate dehydratase PF449_12835 PF00756 Putative esterase PF449_12840 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_12840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_12840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_12845 PF00375 Sodium:dicarboxylate symporter family PF449_12850 PF00591 Glycosyl transferase family, a/b domain PF449_12850 PF02885 Glycosyl transferase family, helical bundle domain PF449_12855 PF07023 Protein of unknown function (DUF1315) PF449_12860 PF01513 ATP-NAD kinase PF449_12865 PF00912 Transglycosylase PF449_12865 PF00905 Penicillin binding protein transpeptidase domain PF449_12865 PF14814 Bifunctional transglycosylase second domain PF449_12875 PF00293 NUDIX domain PF449_12885 PF08521 Two-component sensor kinase N-terminal PF449_12885 PF00512 His Kinase A (phospho-acceptor) domain PF449_12885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_12890 PF00072 Response regulator receiver domain PF449_12890 PF00486 Transcriptional regulatory protein, C terminal PF449_12900 PF00437 Type II/IV secretion system protein PF449_12900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PF449_12910 PF18389 TrmO C-terminal domain PF449_12910 PF01980 tRNA-methyltransferase O PF449_12915 PF00175 Oxidoreductase NAD-binding domain PF449_12915 PF00970 Oxidoreductase FAD-binding domain PF449_12920 PF02567 Phenazine biosynthesis-like protein PF449_12925 PF00155 Aminotransferase class I and II PF449_12925 PF00392 Bacterial regulatory proteins, gntR family PF449_12930 PF16325 Peptidase family U32 C-terminal domain PF449_12930 PF01136 Peptidase family U32 PF449_12935 PF00037 4Fe-4S binding domain PF449_12940 PF00893 Small Multidrug Resistance protein PF449_12945 PF00005 ABC transporter PF449_12950 PF00528 Binding-protein-dependent transport system inner membrane component PF449_12955 PF00528 Binding-protein-dependent transport system inner membrane component PF449_12960 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF449_12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_12965 PF03466 LysR substrate binding domain PF449_12970 PF13533 Biotin-lipoyl like PF449_12975 PF00873 AcrB/AcrD/AcrF family PF449_12980 PF02321 Outer membrane efflux protein PF449_12985 PF00464 Serine hydroxymethyltransferase PF449_13015 PF00005 ABC transporter PF449_13020 PF01061 ABC-2 type transporter PF449_13025 PF14489 QueF-like protein PF449_13025 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PF449_13035 PF01098 Cell cycle protein PF449_13040 PF13406 Transglycosylase SLT domain PF449_13045 PF03330 Lytic transglycolase PF449_13045 PF05036 Sporulation related domain PF449_13065 PF12833 Helix-turn-helix domain PF449_13075 PF00889 Elongation factor TS PF449_13080 PF00318 Ribosomal protein S2 PF449_13085 PF00557 Metallopeptidase family M24 PF449_13095 PF07690 Major Facilitator Superfamily PF449_13105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF449_13105 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_13110 PF04055 Radical SAM superfamily PF449_13115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_13115 PF09317 Domain of unknown function (DUF1974) PF449_13115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_13130 PF05221 S-adenosyl-L-homocysteine hydrolase PF449_13130 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PF449_13135 PF02219 Methylenetetrahydrofolate reductase PF449_13140 PF04452 RNA methyltransferase PF449_13145 PF03707 Bacterial signalling protein N terminal repeat PF449_13145 PF00990 Diguanylate cyclase, GGDEF domain PF449_13145 PF00563 EAL domain PF449_13150 PF01515 Phosphate acetyl/butaryl transferase PF449_13150 PF00390 Malic enzyme, N-terminal domain PF449_13150 PF03949 Malic enzyme, NAD binding domain PF449_13155 PF01743 Poly A polymerase head domain PF449_13155 PF12627 Probable RNA and SrmB- binding site of polymerase A PF449_13160 PF13180 PDZ domain PF449_13165 PF01784 NIF3 (NGG1p interacting factor 3) PF449_13170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PF449_13170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PF449_13205 PF01040 UbiA prenyltransferase family PF449_13210 PF04345 Chorismate lyase PF449_13215 PF00120 Glutamine synthetase, catalytic domain PF449_13215 PF03951 Glutamine synthetase, beta-Grasp domain PF449_13220 PF00854 POT family PF449_13230 PF00117 Glutamine amidotransferase class-I PF449_13235 PF11838 ERAP1-like C-terminal domain PF449_13235 PF01433 Peptidase family M1 domain PF449_13240 PF07715 TonB-dependent Receptor Plug Domain PF449_13240 PF00593 TonB dependent receptor PF449_13245 PF02885 Glycosyl transferase family, helical bundle domain PF449_13245 PF00591 Glycosyl transferase family, a/b domain PF449_13250 PF00218 Indole-3-glycerol phosphate synthase PF449_13265 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PF449_13265 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PF449_13270 PF00111 2Fe-2S iron-sulfur cluster binding domain PF449_13270 PF01799 [2Fe-2S] binding domain PF449_13275 PF01227 GTP cyclohydrolase I PF449_13280 PF00144 Beta-lactamase PF449_13295 PF05675 Protein of unknown function (DUF817) PF449_13300 PF01208 Uroporphyrinogen decarboxylase (URO-D) PF449_13310 PF00425 chorismate binding enzyme PF449_13315 PF17837 4'-phosphopantetheinyl transferase N-terminal domain PF449_13315 PF01648 4'-phosphopantetheinyl transferase superfamily PF449_13320 PF00975 Thioesterase domain PF449_13325 PF00005 ABC transporter PF449_13330 PF00005 ABC transporter PF449_13340 PF00282 Pyridoxal-dependent decarboxylase conserved domain PF449_13345 PF00857 Isochorismatase family PF449_13345 PF00550 Phosphopantetheine attachment site PF449_13350 PF13193 AMP-binding enzyme C-terminal domain PF449_13350 PF00501 AMP-binding enzyme PF449_13355 PF00501 AMP-binding enzyme PF449_13355 PF00668 Condensation domain PF449_13355 PF00550 Phosphopantetheine attachment site PF449_13360 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PF449_13365 PF07715 TonB-dependent Receptor Plug Domain PF449_13365 PF00593 TonB dependent receptor PF449_13370 PF01497 Periplasmic binding protein PF449_13375 PF00005 ABC transporter PF449_13380 PF01032 FecCD transport family PF449_13385 PF01032 FecCD transport family PF449_13395 PF13193 AMP-binding enzyme C-terminal domain PF449_13395 PF00668 Condensation domain PF449_13395 PF00550 Phosphopantetheine attachment site PF449_13395 PF00975 Thioesterase domain PF449_13395 PF00501 AMP-binding enzyme PF449_13400 PF00501 AMP-binding enzyme PF449_13400 PF00550 Phosphopantetheine attachment site PF449_13400 PF00668 Condensation domain PF449_13400 PF13193 AMP-binding enzyme C-terminal domain PF449_13410 PF08348 YheO-like PAS domain PF449_13410 PF13309 HTH domain PF449_13415 PF00291 Pyridoxal-phosphate dependent enzyme PF449_13420 PF17954 Quercetinase C-terminal cupin domain PF449_13420 PF02678 Pirin PF449_13450 PF12833 Helix-turn-helix domain PF449_13450 PF12852 Cupin PF449_13455 PF00106 short chain dehydrogenase PF449_13460 PF16884 N-terminal domain of oxidoreductase PF449_13460 PF00107 Zinc-binding dehydrogenase PF449_13465 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF449_13465 PF12833 Helix-turn-helix domain PF449_13470 PF01370 NAD dependent epimerase/dehydratase family PF449_13480 PF00561 alpha/beta hydrolase fold PF449_13485 PF00743 Flavin-binding monooxygenase-like PF449_13495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_13495 PF03466 LysR substrate binding domain PF449_13500 PF00857 Isochorismatase family PF449_13540 PF04328 Selenoprotein, putative PF449_13545 PF02554 Carbon starvation protein CstA PF449_13545 PF13722 5TM C-terminal transporter carbon starvation CstA PF449_13550 PF09285 Elongation factor P, C-terminal PF449_13550 PF08207 Elongation factor P (EF-P) KOW-like domain PF449_13550 PF01132 Elongation factor P (EF-P) OB domain PF449_13555 PF04055 Radical SAM superfamily PF449_13565 PF12792 CSS motif domain associated with EAL PF449_13565 PF00563 EAL domain PF449_13570 PF01197 Ribosomal protein L31 PF449_13575 PF13593 SBF-like CPA transporter family (DUF4137) PF449_13580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF449_13585 PF07690 Major Facilitator Superfamily PF449_13590 PF05362 Lon protease (S16) C-terminal proteolytic domain PF449_13590 PF13654 AAA domain PF449_13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_13595 PF03466 LysR substrate binding domain PF449_13600 PF01476 LysM domain PF449_13600 PF01551 Peptidase family M23 PF449_13605 PF01975 Survival protein SurE PF449_13620 PF07943 Penicillin-binding protein 5, C-terminal domain PF449_13620 PF00768 D-alanyl-D-alanine carboxypeptidase PF449_13625 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_13630 PF13344 Haloacid dehalogenase-like hydrolase PF449_13630 PF00293 NUDIX domain PF449_13640 PF04356 Protein of unknown function (DUF489) PF449_13645 PF00206 Lyase PF449_13645 PF08328 Adenylosuccinate lyase C-terminal PF449_13660 PF01343 Peptidase family S49 PF449_13660 PF08496 Peptidase family S49 N-terminal PF449_13665 PF00005 ABC transporter PF449_13670 PF00528 Binding-protein-dependent transport system inner membrane component PF449_13675 PF00528 Binding-protein-dependent transport system inner membrane component PF449_13680 PF12849 PBP superfamily domain PF449_13685 PF00324 Amino acid permease PF449_13690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PF449_13690 PF00205 Thiamine pyrophosphate enzyme, central domain PF449_13690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PF449_13695 PF01037 Lrp/AsnC ligand binding domain PF449_13700 PF00171 Aldehyde dehydrogenase family PF449_13705 PF00282 Pyridoxal-dependent decarboxylase conserved domain PF449_13710 PF00202 Aminotransferase class-III PF449_13720 PF00440 Bacterial regulatory proteins, tetR family PF449_13720 PF17754 MftR C-terminal domain PF449_13730 PF00487 Fatty acid desaturase PF449_13735 PF00970 Oxidoreductase FAD-binding domain PF449_13735 PF00111 2Fe-2S iron-sulfur cluster binding domain PF449_13735 PF00175 Oxidoreductase NAD-binding domain PF449_13740 PF00440 Bacterial regulatory proteins, tetR family PF449_13750 PF00271 Helicase conserved C-terminal domain PF449_13750 PF12137 RNA polymerase recycling family C-terminal PF449_13750 PF00176 SNF2 family N-terminal domain PF449_13750 PF18339 RapA N-terminal Tudor like domain 1 PF449_13750 PF18337 RapA N-terminal Tudor like domain PF449_13755 PF00849 RNA pseudouridylate synthase PF449_13765 PF00202 Aminotransferase class-III PF449_13770 PF02581 Thiamine monophosphate synthase PF449_13795 PF00675 Insulinase (Peptidase family M16) PF449_13795 PF05193 Peptidase M16 inactive domain PF449_13800 PF02567 Phenazine biosynthesis-like protein PF449_13805 PF00375 Sodium:dicarboxylate symporter family PF449_13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_13810 PF03466 LysR substrate binding domain PF449_13815 PF06779 Uncharacterised MFS-type transporter YbfB PF449_13835 PF00180 Isocitrate/isopropylmalate dehydrogenase PF449_13840 PF00849 RNA pseudouridylate synthase PF449_13845 PF03971 Monomeric isocitrate dehydrogenase PF449_13855 PF07943 Penicillin-binding protein 5, C-terminal domain PF449_13855 PF00768 D-alanyl-D-alanine carboxypeptidase PF449_13860 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_13865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF449_13875 PF03060 Nitronate monooxygenase PF449_13880 PF01207 Dihydrouridine synthase (Dus) PF449_13885 PF07759 Protein of unknown function (DUF1615) PF449_13895 PF00696 Amino acid kinase family PF449_13895 PF01472 PUA domain PF449_13900 PF01018 GTP1/OBG PF449_13900 PF01926 50S ribosome-binding GTPase PF449_13915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PF449_13915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PF449_13920 PF00892 EamA-like transporter family PF449_13930 PF00271 Helicase conserved C-terminal domain PF449_13930 PF04851 Type III restriction enzyme, res subunit PF449_13930 PF02151 UvrB/uvrC motif PF449_13930 PF12344 Ultra-violet resistance protein B PF449_13930 PF17757 UvrB interaction domain PF449_13940 PF17151 Periplasmic sensor domain PF449_13940 PF00990 Diguanylate cyclase, GGDEF domain PF449_13950 PF00155 Aminotransferase class I and II PF449_13960 PF00012 Hsp70 protein PF449_13990 PF00106 short chain dehydrogenase PF449_13995 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) PF449_14000 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PF449_14005 PF02565 Recombination protein O C terminal PF449_14005 PF11967 Recombination protein O N terminal PF449_14015 PF01926 50S ribosome-binding GTPase PF449_14015 PF07650 KH domain PF449_14020 PF14622 Ribonuclease-III-like PF449_14020 PF00035 Double-stranded RNA binding motif PF449_14030 PF10502 Signal peptidase, peptidase S26 PF449_14035 PF00679 Elongation factor G C-terminus PF449_14035 PF00009 Elongation factor Tu GTP binding domain PF449_14035 PF06421 GTP-binding protein LepA C-terminus PF449_14035 PF03144 Elongation factor Tu domain 2 PF449_14040 PF13302 Acetyltransferase (GNAT) domain PF449_14050 PF13180 PDZ domain PF449_14055 PF00890 FAD binding domain PF449_14055 PF02910 Fumarate reductase flavoprotein C-term PF449_14065 PF02223 Thymidylate kinase PF449_14070 PF02618 YceG-like family PF449_14075 PF01063 Amino-transferase class IV PF449_14090 PF00528 Binding-protein-dependent transport system inner membrane component PF449_14095 PF00528 Binding-protein-dependent transport system inner membrane component PF449_14100 PF00005 ABC transporter PF449_14100 PF12857 TOBE-like domain PF449_14105 PF03466 LysR substrate binding domain PF449_14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_14115 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal PF449_14115 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_14115 PF14602 Hexapeptide repeat of succinyl-transferase PF449_14125 PF06508 Queuosine biosynthesis protein QueC PF449_14140 PF00578 AhpC/TSA family PF449_14150 PF01467 Cytidylyltransferase-like PF449_14150 PF00293 NUDIX domain PF449_14155 PF00378 Enoyl-CoA hydratase/isomerase PF449_14160 PF01784 NIF3 (NGG1p interacting factor 3) PF449_14170 PF07690 Major Facilitator Superfamily PF449_14175 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PF449_14175 PF02769 AIR synthase related protein, C-terminal domain PF449_14175 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PF449_14180 PF01966 HD domain PF449_14185 PF01330 RuvA N terminal domain PF449_14185 PF07499 RuvA, C-terminal domain PF449_14190 PF17864 RuvB AAA lid domain PF449_14190 PF05496 Holliday junction DNA helicase RuvB P-loop domain PF449_14190 PF05491 RuvB C-terminal winged helix domain PF449_14195 PF07687 Peptidase dimerisation domain PF449_14195 PF01546 Peptidase family M20/M25/M40 PF449_14200 PF03061 Thioesterase superfamily PF449_14205 PF01618 MotA/TolQ/ExbB proton channel family PF449_14210 PF02472 Biopolymer transport protein ExbD/TolR PF449_14220 PF07676 WD40-like Beta Propeller Repeat PF449_14220 PF04052 TolB amino-terminal domain PF449_14225 PF00691 OmpA family PF449_14235 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PF449_14240 PF00588 SpoU rRNA Methylase family PF449_14240 PF08032 RNA 2'-O ribose methyltransferase substrate binding PF449_14270 PF00308 Bacterial dnaA protein PF449_14270 PF08299 Bacterial dnaA protein helix-turn-helix PF449_14270 PF11638 DnaA N-terminal domain PF449_14275 PF01594 AI-2E family transporter PF449_14280 PF02769 AIR synthase related protein, C-terminal domain PF449_14280 PF00586 AIR synthase related protein, N-terminal domain PF449_14285 PF00551 Formyl transferase PF449_14290 PF12697 Alpha/beta hydrolase family PF449_14295 PF06965 Na+/H+ antiporter 1 PF449_14295 PF01343 Peptidase family S49 PF449_14305 PF03772 Competence protein PF449_14305 PF13567 Domain of unknown function (DUF4131) PF449_14305 PF00753 Metallo-beta-lactamase superfamily PF449_14310 PF00005 ABC transporter PF449_14315 PF02687 FtsX-like permease family PF449_14315 PF12704 MacB-like periplasmic core domain PF449_14325 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PF449_14340 PF00266 Aminotransferase class-V PF449_14350 PF13533 Biotin-lipoyl like PF449_14370 PF00535 Glycosyl transferase family 2 PF449_14385 PF03989 DNA gyrase C-terminal domain, beta-propeller PF449_14385 PF00521 DNA gyrase/topoisomerase IV, subunit A PF449_14390 PF01012 Electron transfer flavoprotein domain PF449_14390 PF00766 Electron transfer flavoprotein FAD-binding domain PF449_14395 PF01012 Electron transfer flavoprotein domain PF449_14400 PF00589 Phage integrase family PF449_14400 PF02899 Phage integrase, N-terminal SAM-like domain PF449_14405 PF01810 LysE type translocator PF449_14410 PF00561 alpha/beta hydrolase fold PF449_14415 PF01678 Diaminopimelate epimerase PF449_14420 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PF449_14420 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PF449_14430 PF00324 Amino acid permease PF449_14435 PF18073 Rubredoxin metal binding domain PF449_14445 PF00152 tRNA synthetases class II (D, K and N) PF449_14450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF449_14450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF449_14450 PF11890 Domain of unknown function (DUF3410) PF449_14455 PF06803 Protein of unknown function (DUF1232) PF449_14460 PF02634 FdhD/NarQ family PF449_14465 PF00384 Molybdopterin oxidoreductase PF449_14470 PF02595 Glycerate kinase family PF449_14485 PF00881 Nitroreductase family PF449_14510 PF09857 Putative toxin of bacterial toxin-antitoxin pair PF449_14535 PF00668 Condensation domain PF449_14535 PF13193 AMP-binding enzyme C-terminal domain PF449_14535 PF00501 AMP-binding enzyme PF449_14535 PF00975 Thioesterase domain PF449_14535 PF00550 Phosphopantetheine attachment site PF449_14550 PF01272 Transcription elongation factor, GreA/GreB, C-term PF449_14550 PF03449 Transcription elongation factor, N-terminal PF449_14555 PF01464 Transglycosylase SLT domain PF449_14555 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF449_14565 PF01171 PP-loop family PF449_14570 PF01464 Transglycosylase SLT domain PF449_14575 PF01435 Peptidase family M48 PF449_14585 PF00873 AcrB/AcrD/AcrF family PF449_14590 PF03009 Glycerophosphoryl diester phosphodiesterase family PF449_14595 PF00753 Metallo-beta-lactamase superfamily PF449_14600 PF01219 Prokaryotic diacylglycerol kinase PF449_14605 PF00118 TCP-1/cpn60 chaperonin family PF449_14610 PF00166 Chaperonin 10 Kd subunit PF449_14620 PF00149 Calcineurin-like phosphoesterase PF449_14625 PF00781 Diacylglycerol kinase catalytic domain PF449_14630 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain PF449_14630 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain PF449_14635 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PF449_14635 PF01266 FAD dependent oxidoreductase PF449_14640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PF449_14640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PF449_14645 PF00083 Sugar (and other) transporter PF449_14660 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PF449_14660 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PF449_14675 PF09423 PhoD-like phosphatase PF449_14675 PF16655 PhoD-like phosphatase, N-terminal domain PF449_14695 PF00809 Pterin binding enzyme PF449_14700 PF17862 AAA+ lid domain PF449_14700 PF06480 FtsH Extracellular PF449_14700 PF01434 Peptidase family M41 PF449_14700 PF00004 ATPase family associated with various cellular activities (AAA) PF449_14705 PF01728 FtsJ-like methyltransferase PF449_14710 PF01985 CRS1 / YhbY (CRM) domain PF449_14725 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PF449_14725 PF00117 Glutamine amidotransferase class-I PF449_14730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF449_14730 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PF449_14730 PF02142 MGS-like domain PF449_14735 PF01272 Transcription elongation factor, GreA/GreB, C-term PF449_14735 PF03449 Transcription elongation factor, N-terminal PF449_14740 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_14745 PF00582 Universal stress protein family PF449_14750 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PF449_14760 PF09587 Bacterial capsule synthesis protein PGA_cap PF449_14775 PF00999 Sodium/hydrogen exchanger family PF449_14780 PF04228 Putative neutral zinc metallopeptidase PF449_14785 PF05661 Protein of unknown function (DUF808) PF449_14790 PF00579 tRNA synthetases class I (W and Y) PF449_14795 PF02629 CoA binding domain PF449_14795 PF00549 CoA-ligase PF449_14800 PF00549 CoA-ligase PF449_14800 PF08442 ATP-grasp domain PF449_14805 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_14805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF449_14810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PF449_14810 PF00364 Biotin-requiring enzyme PF449_14810 PF02817 e3 binding domain PF449_14815 PF02779 Transketolase, pyrimidine binding domain PF449_14815 PF16078 2-oxoglutarate dehydrogenase N-terminus PF449_14815 PF16870 2-oxoglutarate dehydrogenase C-terminal PF449_14815 PF00676 Dehydrogenase E1 component PF449_14830 PF13085 2Fe-2S iron-sulfur cluster binding domain PF449_14835 PF00890 FAD binding domain PF449_14835 PF02910 Fumarate reductase flavoprotein C-term PF449_14840 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PF449_14845 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PF449_14850 PF00285 Citrate synthase, C-terminal domain PF449_14860 PF00581 Rhodanese-like domain PF449_14860 PF17773 UPF0176 acylphosphatase like domain PF449_14875 PF03979 Sigma-70 factor, region 1.1 PF449_14875 PF00140 Sigma-70 factor, region 1.2 PF449_14875 PF04542 Sigma-70 region 2 PF449_14875 PF04539 Sigma-70 region 3 PF449_14875 PF04545 Sigma-70, region 4 PF449_14875 PF04546 Sigma-70, non-essential region PF449_14880 PF04359 Protein of unknown function (DUF493) PF449_14885 PF03099 Biotin/lipoate A/B protein ligase family PF449_14895 PF00465 Iron-containing alcohol dehydrogenase PF449_14900 PF13520 Amino acid permease PF449_14905 PF03358 NADPH-dependent FMN reductase PF449_14910 PF01638 HxlR-like helix-turn-helix PF449_14915 PF00588 SpoU rRNA Methylase family PF449_14920 PF14824 Sirohaem biosynthesis protein central PF449_14920 PF10414 Sirohaem synthase dimerisation region PF449_14920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PF449_14925 PF02403 Seryl-tRNA synthetase N-terminal domain PF449_14925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PF449_14935 PF03548 Outer membrane lipoprotein carrier protein LolA PF449_14940 PF01016 Ribosomal L27 protein PF449_14945 PF00829 Ribosomal prokaryotic L21 protein PF449_14955 PF00348 Polyprenyl synthetase PF449_14965 PF01569 PAP2 superfamily PF449_14970 PF00529 HlyD membrane-fusion protein of T1SS PF449_14970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF449_14975 PF00873 AcrB/AcrD/AcrF family PF449_14980 PF02321 Outer membrane efflux protein PF449_14985 PF01906 Putative heavy-metal-binding PF449_14990 PF01906 Putative heavy-metal-binding PF449_15010 PF08264 Anticodon-binding domain of tRNA PF449_15010 PF00133 tRNA synthetases class I (I, L, M and V) PF449_15010 PF10458 Valyl tRNA synthetase tRNA binding arm PF449_15030 PF03466 LysR substrate binding domain PF449_15030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_15035 PF00909 Ammonium Transporter Family PF449_15050 PF08521 Two-component sensor kinase N-terminal PF449_15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_15050 PF00512 His Kinase A (phospho-acceptor) domain PF449_15055 PF00072 Response regulator receiver domain PF449_15055 PF00486 Transcriptional regulatory protein, C terminal PF449_15060 PF00884 Sulfatase PF449_15060 PF08019 Phosphoethanolamine transferase EptA/EptB PF449_15080 PF01734 Patatin-like phospholipase PF449_15090 PF01145 SPFH domain / Band 7 family PF449_15095 PF04237 YjbR PF449_15100 PF00348 Polyprenyl synthetase PF449_15105 PF04303 PrpF protein PF449_15110 PF00324 Amino acid permease PF449_15145 PF01757 Acyltransferase family PF449_15245 PF00574 Clp protease PF449_15250 PF04860 Phage portal protein PF449_15255 PF03354 Phage Terminase PF449_15300 PF05866 Endodeoxyribonuclease RusA PF449_15320 PF03796 DnaB-like helicase C terminal domain PF449_15320 PF00772 DnaB-like helicase N terminal domain PF449_15355 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT PF449_15360 PF01726 LexA DNA binding domain PF449_15360 PF00717 Peptidase S24-like PF449_15415 PF01965 DJ-1/PfpI family PF449_15420 PF08240 Alcohol dehydrogenase GroES-like domain PF449_15420 PF00107 Zinc-binding dehydrogenase PF449_15425 PF12833 Helix-turn-helix domain PF449_15425 PF06719 AraC-type transcriptional regulator N-terminus PF449_15440 PF02673 Bacitracin resistance protein BacA PF449_15460 PF02525 Flavodoxin-like fold PF449_15475 PF01507 Phosphoadenosine phosphosulfate reductase family PF449_15480 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain PF449_15480 PF06974 Protein of unknown function (DUF1298) PF449_15490 PF00575 S1 RNA binding domain PF449_15490 PF10150 Ribonuclease E/G family PF449_15495 PF02545 Maf-like protein PF449_15500 PF04093 rod shape-determining protein MreD PF449_15505 PF04085 rod shape-determining protein MreC PF449_15515 PF02686 Glu-tRNAGln amidotransferase C subunit PF449_15520 PF01425 Amidase PF449_15525 PF02934 GatB/GatE catalytic domain PF449_15525 PF02637 GatB domain PF449_15550 PF05992 SbmA/BacA-like family PF449_15555 PF13291 ACT domain PF449_15555 PF00291 Pyridoxal-phosphate dependent enzyme PF449_15560 PF01734 Patatin-like phospholipase PF449_15585 PF00881 Nitroreductase family PF449_15590 PF07690 Major Facilitator Superfamily PF449_15595 PF12805 FUSC-like inner membrane protein yccS PF449_15605 PF00258 Flavodoxin PF449_15605 PF00175 Oxidoreductase NAD-binding domain PF449_15605 PF00667 FAD binding domain PF449_15645 PF17969 L,D-transpeptidase C-terminal domain PF449_15645 PF03734 L,D-transpeptidase catalytic domain PF449_15650 PF04304 Protein of unknown function (DUF454) PF449_15660 PF08085 Entericidin EcnA/B family PF449_15665 PF07687 Peptidase dimerisation domain PF449_15665 PF01546 Peptidase family M20/M25/M40 PF449_15680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_15680 PF01627 Hpt domain PF449_15680 PF00072 Response regulator receiver domain PF449_15680 PF01584 CheW-like domain PF449_15685 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PF449_15685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PF449_15690 PF01584 CheW-like domain PF449_15695 PF00072 Response regulator receiver domain PF449_15700 PF00072 Response regulator receiver domain PF449_15715 PF00873 AcrB/AcrD/AcrF family PF449_15720 PF04073 Aminoacyl-tRNA editing domain PF449_15720 PF03129 Anticodon binding domain PF449_15720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PF449_15725 PF07411 Domain of unknown function (DUF1508) PF449_15730 PF03831 PhnA domain PF449_15730 PF08274 PhnA Zinc-Ribbon PF449_15735 PF04343 Protein of unknown function, DUF488 PF449_15745 PF01571 Aminomethyltransferase folate-binding domain PF449_15750 PF10411 Disulfide bond isomerase protein N-terminus PF449_15750 PF13098 Thioredoxin-like domain PF449_15760 PF03547 Membrane transport protein PF449_15765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF449_15770 PF07715 TonB-dependent Receptor Plug Domain PF449_15770 PF00593 TonB dependent receptor PF449_15775 PF02245 Methylpurine-DNA glycosylase (MPG) PF449_15780 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PF449_15780 PF06827 Zinc finger found in FPG and IleRS PF449_15780 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PF449_15795 PF01741 Large-conductance mechanosensitive channel, MscL PF449_15800 PF00679 Elongation factor G C-terminus PF449_15800 PF00009 Elongation factor Tu GTP binding domain PF449_15800 PF03144 Elongation factor Tu domain 2 PF449_15805 PF00860 Permease family PF449_15815 PF00324 Amino acid permease PF449_15820 PF01139 tRNA-splicing ligase RtcB PF449_15830 PF00691 OmpA family PF449_15830 PF13505 Outer membrane protein beta-barrel domain PF449_15840 PF02803 Thiolase, C-terminal domain PF449_15840 PF00108 Thiolase, N-terminal domain PF449_15850 PF00893 Small Multidrug Resistance protein PF449_15860 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PF449_15860 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PF449_15865 PF01011 PQQ enzyme repeat PF449_15870 PF04966 Carbohydrate-selective porin, OprB family PF449_15875 PF02515 CoA-transferase family III PF449_15880 PF02311 AraC-like ligand binding domain PF449_15880 PF12833 Helix-turn-helix domain PF449_15885 PF00108 Thiolase, N-terminal domain PF449_15885 PF02803 Thiolase, C-terminal domain PF449_15890 PF00378 Enoyl-CoA hydratase/isomerase PF449_15890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF449_15890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF449_15915 PF03006 Haemolysin-III related PF449_15920 PF07690 Major Facilitator Superfamily PF449_15920 PF00083 Sugar (and other) transporter PF449_15930 PF02810 SEC-C motif PF449_15930 PF07517 SecA DEAD-like domain PF449_15930 PF01043 SecA preprotein cross-linking domain PF449_15930 PF07516 SecA Wing and Scaffold domain PF449_15935 PF00578 AhpC/TSA family PF449_15935 PF10417 C-terminal domain of 1-Cys peroxiredoxin PF449_15940 PF00753 Metallo-beta-lactamase superfamily PF449_15955 PF08245 Mur ligase middle domain PF449_15955 PF02875 Mur ligase family, glutamate ligase domain PF449_15960 PF01039 Carboxyl transferase domain PF449_15965 PF00290 Tryptophan synthase alpha chain PF449_15990 PF00291 Pyridoxal-phosphate dependent enzyme PF449_15995 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PF449_16000 PF07715 TonB-dependent Receptor Plug Domain PF449_16000 PF00593 TonB dependent receptor PF449_16005 PF01923 Cobalamin adenosyltransferase PF449_16010 PF03009 Glycerophosphoryl diester phosphodiesterase family PF449_16025 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PF449_16030 PF00072 Response regulator receiver domain PF449_16030 PF00486 Transcriptional regulatory protein, C terminal PF449_16035 PF00672 HAMP domain PF449_16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_16035 PF00512 His Kinase A (phospho-acceptor) domain PF449_16045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_16045 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_16045 PF12806 Acetyl-CoA dehydrogenase C-terminal like PF449_16045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_16050 PF12806 Acetyl-CoA dehydrogenase C-terminal like PF449_16050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_16050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_16050 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_16055 PF06146 Phosphate-starvation-inducible E PF449_16075 PF07715 TonB-dependent Receptor Plug Domain PF449_16075 PF00593 TonB dependent receptor PF449_16085 PF00152 tRNA synthetases class II (D, K and N) PF449_16085 PF01336 OB-fold nucleic acid binding domain PF449_16085 PF02938 GAD domain PF449_16125 PF13439 Glycosyltransferase Family 4 PF449_16125 PF00534 Glycosyl transferases group 1 PF449_16130 PF00535 Glycosyl transferase family 2 PF449_16135 PF01522 Polysaccharide deacetylase PF449_16150 PF01063 Amino-transferase class IV PF449_16155 PF08335 GlnD PII-uridylyltransferase PF449_16155 PF03710 Glutamate-ammonia ligase adenylyltransferase PF449_16160 PF00512 His Kinase A (phospho-acceptor) domain PF449_16160 PF07689 KaiB domain PF449_16160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_16170 PF02547 Queuosine biosynthesis protein PF449_16185 PF01702 Queuine tRNA-ribosyltransferase PF449_16190 PF02699 Preprotein translocase subunit PF449_16195 PF07549 SecD/SecF GG Motif PF449_16195 PF13721 SecD export protein N-terminal TM region PF449_16195 PF02355 Protein export membrane protein PF449_16200 PF07549 SecD/SecF GG Motif PF449_16200 PF02355 Protein export membrane protein PF449_16205 PF04127 DNA / pantothenate metabolism flavoprotein PF449_16205 PF02441 Flavoprotein PF449_16210 PF04002 RadC-like JAB domain PF449_16215 PF01062 Bestrophin, RFP-TM, chloride channel PF449_16220 PF02811 PHP domain PF449_16225 PF04279 Intracellular septation protein A PF449_16230 PF03795 YCII-related domain PF449_16240 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PF449_16240 PF01266 FAD dependent oxidoreductase PF449_16250 PF04461 Protein of unknown function (DUF520) PF449_16260 PF03061 Thioesterase superfamily PF449_16265 PF00085 Thioredoxin PF449_16270 PF00561 alpha/beta hydrolase fold PF449_16275 PF04273 Putative phosphatase (DUF442) PF449_16275 PF00753 Metallo-beta-lactamase superfamily PF449_16285 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_16285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF449_16320 PF17152 Periplasmic sensor domain PF449_16320 PF00990 Diguanylate cyclase, GGDEF domain PF449_16325 PF01389 OmpA-like transmembrane domain PF449_16325 PF00691 OmpA family PF449_16330 PF10518 TAT (twin-arginine translocation) pathway signal sequence PF449_16330 PF00149 Calcineurin-like phosphoesterase PF449_16335 PF13091 PLD-like domain PF449_16345 PF16360 GTP-binding GTPase Middle Region PF449_16345 PF01926 50S ribosome-binding GTPase PF449_16345 PF13167 GTP-binding GTPase N-terminal PF449_16365 PF00149 Calcineurin-like phosphoesterase PF449_16370 PF00398 Ribosomal RNA adenine dimethylase PF449_16375 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PF449_16380 PF00572 Ribosomal protein L13 PF449_16385 PF00380 Ribosomal protein S9/S16 PF449_16390 PF00043 Glutathione S-transferase, C-terminal domain PF449_16390 PF13417 Glutathione S-transferase, N-terminal domain PF449_16395 PF04386 Stringent starvation protein B PF449_16405 PF02785 Biotin carboxylase C-terminal domain PF449_16405 PF00289 Biotin carboxylase, N-terminal domain PF449_16405 PF00364 Biotin-requiring enzyme PF449_16405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF449_16415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_16415 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_16415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_16420 PF01039 Carboxyl transferase domain PF449_16435 PF00440 Bacterial regulatory proteins, tetR family PF449_16435 PF17932 Tetracyclin repressor-like, C-terminal domain PF449_16440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_16440 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_16440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_16485 PF01066 CDP-alcohol phosphatidyltransferase PF449_16490 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PF449_16510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PF449_16510 PF00056 lactate/malate dehydrogenase, NAD binding domain PF449_16520 PF01551 Peptidase family M23 PF449_16520 PF10145 Phage-related minor tail protein PF449_16520 PF01464 Transglycosylase SLT domain PF449_16525 PF01938 TRAM domain PF449_16525 PF00919 Uncharacterized protein family UPF0004 PF449_16525 PF04055 Radical SAM superfamily PF449_16530 PF02562 PhoH-like protein PF449_16535 PF02130 Uncharacterized protein family UPF0054 PF449_16560 PF03358 NADPH-dependent FMN reductase PF449_16565 PF03631 Virulence factor BrkB PF449_16570 PF00892 EamA-like transporter family PF449_16575 PF12833 Helix-turn-helix domain PF449_16580 PF01557 Fumarylacetoacetate (FAA) hydrolase family PF449_16625 PF00575 S1 RNA binding domain PF449_16625 PF00773 RNB domain PF449_16625 PF08206 Ribonuclease B OB domain PF449_16625 PF08461 Ribonuclease R winged-helix domain PF449_16625 PF17876 Cold shock domain PF449_16630 PF01432 Peptidase family M3 PF449_16635 PF09526 Probable metal-binding protein (DUF2387) PF449_16665 PF03937 Flavinator of succinate dehydrogenase PF449_16670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_16670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_16670 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_16675 PF00743 Flavin-binding monooxygenase-like PF449_16680 PF01196 Ribosomal protein L17 PF449_16685 PF01000 RNA polymerase Rpb3/RpoA insert domain PF449_16685 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PF449_16685 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PF449_16690 PF00163 Ribosomal protein S4/S9 N-terminal domain PF449_16690 PF01479 S4 domain PF449_16695 PF00411 Ribosomal protein S11 PF449_16700 PF00416 Ribosomal protein S13/S18 PF449_16705 PF00444 Ribosomal protein L36 PF449_16710 PF00344 SecY translocase PF449_16715 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PF449_16720 PF00327 Ribosomal protein L30p/L7e PF449_16725 PF00333 Ribosomal protein S5, N-terminal domain PF449_16725 PF03719 Ribosomal protein S5, C-terminal domain PF449_16730 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PF449_16735 PF00347 Ribosomal protein L6 PF449_16740 PF00410 Ribosomal protein S8 PF449_16745 PF00253 Ribosomal protein S14p/S29e PF449_16750 PF00281 Ribosomal protein L5 PF449_16750 PF00673 ribosomal L5P family C-terminus PF449_16755 PF00467 KOW motif PF449_16755 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PF449_16760 PF00238 Ribosomal protein L14p/L23e PF449_16765 PF00366 Ribosomal protein S17 PF449_16770 PF00831 Ribosomal L29 protein PF449_16775 PF00252 Ribosomal protein L16p/L10e PF449_16785 PF00237 Ribosomal protein L22p/L17e PF449_16790 PF00203 Ribosomal protein S19 PF449_16795 PF00181 Ribosomal Proteins L2, RNA binding domain PF449_16795 PF03947 Ribosomal Proteins L2, C-terminal domain PF449_16800 PF00276 Ribosomal protein L23 PF449_16805 PF00573 Ribosomal protein L4/L1 family PF449_16810 PF00297 Ribosomal protein L3 PF449_16815 PF00338 Ribosomal protein S10p/S20e PF449_16820 PF00117 Glutamine amidotransferase class-I PF449_16825 PF01053 Cys/Met metabolism PLP-dependent enzyme PF449_16830 PF05872 Bacterial protein of unknown function (DUF853) PF449_16835 PF00970 Oxidoreductase FAD-binding domain PF449_16835 PF00042 Globin PF449_16835 PF00175 Oxidoreductase NAD-binding domain PF449_16840 PF02082 Transcriptional regulator PF449_16845 PF01926 50S ribosome-binding GTPase PF449_16855 PF00375 Sodium:dicarboxylate symporter family PF449_16865 PF01553 Acyltransferase PF449_16880 PF17191 RecG wedge domain PF449_16880 PF00271 Helicase conserved C-terminal domain PF449_16880 PF00270 DEAD/DEAH box helicase PF449_16885 PF00156 Phosphoribosyl transferase domain PF449_16890 PF00293 NUDIX domain PF449_16895 PF03641 Possible lysine decarboxylase PF449_16900 PF01544 CorA-like Mg2+ transporter protein PF449_16910 PF05494 MlaC protein PF449_16920 PF02405 Permease MlaE PF449_16925 PF00005 ABC transporter PF449_16935 PF03880 DbpA RNA binding domain PF449_16935 PF00270 DEAD/DEAH box helicase PF449_16935 PF12343 Cold shock protein DEAD box A PF449_16935 PF00271 Helicase conserved C-terminal domain PF449_16940 PF00459 Inositol monophosphatase family PF449_16945 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PF449_16945 PF02779 Transketolase, pyrimidine binding domain PF449_16945 PF02780 Transketolase, C-terminal domain PF449_16950 PF00925 GTP cyclohydrolase II PF449_16955 PF01218 Coproporphyrinogen III oxidase PF449_16960 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PF449_16960 PF01488 Shikimate / quinate 5-dehydrogenase PF449_16960 PF08501 Shikimate dehydrogenase substrate binding domain PF449_16970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF449_16970 PF02770 Acyl-CoA dehydrogenase, middle domain PF449_16970 PF12806 Acetyl-CoA dehydrogenase C-terminal like PF449_16970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF449_16980 PF04024 PspC domain PF449_16985 PF00571 CBS domain PF449_17010 PF02091 Glycyl-tRNA synthetase alpha subunit PF449_17015 PF05746 DALR anticodon binding domain PF449_17015 PF02092 Glycyl-tRNA synthetase beta subunit PF449_17030 PF00892 EamA-like transporter family PF449_17035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_17035 PF03466 LysR substrate binding domain PF449_17050 PF05922 Peptidase inhibitor I9 PF449_17050 PF00082 Subtilase family PF449_17065 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family PF449_17070 PF04996 Succinylarginine dihydrolase PF449_17075 PF00171 Aldehyde dehydrogenase family PF449_17080 PF04958 Arginine N-succinyltransferase beta subunit PF449_17085 PF00202 Aminotransferase class-III PF449_17090 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PF449_17090 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PF449_17095 PF00324 Amino acid permease PF449_17105 PF08241 Methyltransferase domain PF449_17125 PF13614 AAA domain PF449_17130 PF01594 AI-2E family transporter PF449_17135 PF00080 Copper/zinc superoxide dismutase (SODC) PF449_17140 PF12805 FUSC-like inner membrane protein yccS PF449_17145 PF07690 Major Facilitator Superfamily PF449_17155 PF02525 Flavodoxin-like fold PF449_17160 PF03992 Antibiotic biosynthesis monooxygenase PF449_17170 PF02913 FAD linked oxidases, C-terminal domain PF449_17170 PF01565 FAD binding domain PF449_17175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF449_17175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF449_17180 PF00892 EamA-like transporter family PF449_17185 PF00892 EamA-like transporter family PF449_17200 PF01925 Sulfite exporter TauE/SafE PF449_17205 PF01509 TruB family pseudouridylate synthase (N terminal domain) PF449_17205 PF16198 tRNA pseudouridylate synthase B C-terminal domain PF449_17205 PF09157 Pseudouridine synthase II TruB, C-terminal PF449_17210 PF03280 Proteobacterial lipase chaperone protein PF449_17215 PF00561 alpha/beta hydrolase fold PF449_17220 PF01245 Ribosomal protein L19 PF449_17225 PF01746 tRNA (Guanine-1)-methyltransferase PF449_17230 PF01782 RimM N-terminal domain PF449_17230 PF05239 PRC-barrel domain PF449_17235 PF00886 Ribosomal protein S16 PF449_17280 PF02401 LytB protein PF449_17285 PF00625 Guanylate kinase PF449_17290 PF01192 RNA polymerase Rpb6 PF449_17300 PF02824 TGS domain PF449_17300 PF04607 Region found in RelA / SpoT proteins PF449_17300 PF13291 ACT domain PF449_17305 PF01042 Endoribonuclease L-PSP PF449_17310 PF04324 BFD-like [2Fe-2S] binding domain PF449_17315 PF00210 Ferritin-like domain PF449_17320 PF15864 Protein glycosylation ligase PF449_17320 PF04932 O-Antigen ligase PF449_17320 PF11846 Virulence factor membrane-bound polymerase, C-terminal PF449_17325 PF00114 Pilin (bacterial filament) PF449_17325 PF07963 Prokaryotic N-terminal methylation motif PF449_17335 PF04536 TPM domain PF449_17340 PF04011 LemA family PF449_17350 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PF449_17350 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF449_17355 PF00310 Glutamine amidotransferases class-II PF449_17355 PF04898 Glutamate synthase central domain PF449_17355 PF01645 Conserved region in glutamate synthase PF449_17355 PF01493 GXGXG motif PF449_17365 PF01761 3-dehydroquinate synthase PF449_17370 PF01202 Shikimate kinase PF449_17375 PF11741 AMIN domain PF449_17375 PF00263 Bacterial type II and III secretion system protein PF449_17375 PF03958 Bacterial type II/III secretion system short domain PF449_17375 PF07660 Secretin and TonB N terminus short domain PF449_17385 PF04350 Pilus assembly protein, PilO PF449_17390 PF05137 Fimbrial assembly protein (PilN) PF449_17395 PF11104 Type IV pilus assembly protein PilM; PF449_17400 PF17092 Penicillin-binding protein OB-like domain PF449_17400 PF00912 Transglycosylase PF449_17400 PF00905 Penicillin binding protein transpeptidase domain PF449_17405 PF13847 Methyltransferase domain PF449_17415 PF00953 Glycosyl transferase family 4 PF449_17420 PF02875 Mur ligase family, glutamate ligase domain PF449_17420 PF08245 Mur ligase middle domain PF449_17420 PF01225 Mur ligase family, catalytic domain PF449_17425 PF01225 Mur ligase family, catalytic domain PF449_17425 PF02875 Mur ligase family, glutamate ligase domain PF449_17425 PF08245 Mur ligase middle domain PF449_17430 PF03717 Penicillin-binding Protein dimerisation domain PF449_17430 PF00905 Penicillin binding protein transpeptidase domain PF449_17440 PF01795 MraW methylase family PF449_17455 PF00749 tRNA synthetases class I (E and Q), catalytic domain PF449_17470 PF00324 Amino acid permease PF449_17500 PF01545 Cation efflux family PF449_17505 PF00873 AcrB/AcrD/AcrF family PF449_17510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF449_17510 PF00529 HlyD membrane-fusion protein of T1SS PF449_17535 PF00005 ABC transporter PF449_17535 PF12848 ABC transporter PF449_17540 PF01053 Cys/Met metabolism PLP-dependent enzyme PF449_17545 PF00106 short chain dehydrogenase PF449_17550 PF01740 STAS domain PF449_17550 PF00916 Sulfate permease family PF449_17555 PF17674 HHH domain PF449_17555 PF00575 S1 RNA binding domain PF449_17555 PF09371 Tex-like protein N-terminal domain PF449_17555 PF16921 Tex protein YqgF-like domain PF449_17560 PF00072 Response regulator receiver domain PF449_17560 PF00486 Transcriptional regulatory protein, C terminal PF449_17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_17565 PF00512 His Kinase A (phospho-acceptor) domain PF449_17565 PF00672 HAMP domain PF449_17575 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PF449_17575 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PF449_17580 PF00583 Acetyltransferase (GNAT) family PF449_17600 PF00475 Imidazoleglycerol-phosphate dehydratase PF449_17605 PF00117 Glutamine amidotransferase class-I PF449_17620 PF00977 Histidine biosynthesis protein PF449_17625 PF00664 ABC transporter transmembrane region PF449_17625 PF00005 ABC transporter PF449_17640 PF03992 Antibiotic biosynthesis monooxygenase PF449_17655 PF01636 Phosphotransferase enzyme family PF449_17660 PF00977 Histidine biosynthesis protein PF449_17675 PF00230 Major intrinsic protein PF449_17700 PF02705 K+ potassium transporter PF449_17720 PF02525 Flavodoxin-like fold PF449_17725 PF01638 HxlR-like helix-turn-helix PF449_17755 PF12833 Helix-turn-helix domain PF449_17755 PF02311 AraC-like ligand binding domain PF449_17760 PF00248 Aldo/keto reductase family PF449_17780 PF00440 Bacterial regulatory proteins, tetR family PF449_17785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF449_17785 PF00529 HlyD membrane-fusion protein of T1SS PF449_17790 PF00873 AcrB/AcrD/AcrF family PF449_17795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_17795 PF03466 LysR substrate binding domain PF449_17800 PF07690 Major Facilitator Superfamily PF449_17810 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF449_17810 PF12833 Helix-turn-helix domain PF449_17825 PF01593 Flavin containing amine oxidoreductase PF449_17830 PF05726 Pirin C-terminal cupin domain PF449_17830 PF02678 Pirin PF449_17835 PF00857 Isochorismatase family PF449_17840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_17845 PF00171 Aldehyde dehydrogenase family PF449_17850 PF00202 Aminotransferase class-III PF449_17855 PF00392 Bacterial regulatory proteins, gntR family PF449_17855 PF00155 Aminotransferase class I and II PF449_17860 PF00324 Amino acid permease PF449_17870 PF03591 AzlC protein PF449_17895 PF00664 ABC transporter transmembrane region PF449_17895 PF03412 Peptidase C39 family PF449_17895 PF00005 ABC transporter PF449_17900 PF13533 Biotin-lipoyl like PF449_17905 PF00436 Single-strand binding protein family PF449_17910 PF07690 Major Facilitator Superfamily PF449_17920 PF02581 Thiamine monophosphate synthase PF449_17920 PF03070 TENA/THI-4/PQQC family PF449_17920 PF08543 Phosphomethylpyrimidine kinase PF449_17925 PF06942 GlpM protein PF449_17935 PF00107 Zinc-binding dehydrogenase PF449_17935 PF08240 Alcohol dehydrogenase GroES-like domain PF449_17940 PF00440 Bacterial regulatory proteins, tetR family PF449_17940 PF16925 Tetracyclin repressor-like, C-terminal domain PF449_17945 PF17760 UvrA interaction domain PF449_17945 PF00005 ABC transporter PF449_17945 PF17755 UvrA DNA-binding domain PF449_17955 PF00990 Diguanylate cyclase, GGDEF domain PF449_17965 PF02028 BCCT, betaine/carnitine/choline family transporter PF449_17975 PF00474 Sodium:solute symporter family PF449_17980 PF04341 Protein of unknown function, DUF485 PF449_17985 PF00672 HAMP domain PF449_17985 PF01627 Hpt domain PF449_17985 PF00512 His Kinase A (phospho-acceptor) domain PF449_17985 PF00072 Response regulator receiver domain PF449_17985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_17995 PF00072 Response regulator receiver domain PF449_17995 PF00196 Bacterial regulatory proteins, luxR family PF449_18000 PF03358 NADPH-dependent FMN reductase PF449_18005 PF00296 Luciferase-like monooxygenase PF449_18010 PF01037 Lrp/AsnC ligand binding domain PF449_18015 PF00857 Isochorismatase family PF449_18020 PF16177 Acetyl-coenzyme A synthetase N-terminus PF449_18020 PF00501 AMP-binding enzyme PF449_18020 PF13193 AMP-binding enzyme C-terminal domain PF449_18030 PF00924 Mechanosensitive ion channel PF449_18035 PF04452 RNA methyltransferase PF449_18040 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PF449_18045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF449_18070 PF02272 DHHA1 domain PF449_18070 PF17768 RecJ OB domain PF449_18070 PF01368 DHH family PF449_18075 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PF449_18075 PF01243 Pyridoxamine 5'-phosphate oxidase PF449_18080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF449_18080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF449_18080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF449_18080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PF449_18085 PF00478 IMP dehydrogenase / GMP reductase domain PF449_18085 PF00571 CBS domain PF449_18090 PF03692 Putative zinc- or iron-chelating domain PF449_18095 PF01613 Flavin reductase like domain PF449_18095 PF00258 Flavodoxin PF449_18100 PF07715 TonB-dependent Receptor Plug Domain PF449_18100 PF00593 TonB dependent receptor PF449_18105 PF01169 Uncharacterized protein family UPF0016 PF449_18115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PF449_18115 PF00364 Biotin-requiring enzyme PF449_18115 PF02817 e3 binding domain PF449_18120 PF00456 Transketolase, thiamine diphosphate binding domain PF449_18120 PF17831 Pyruvate dehydrogenase E1 component middle domain PF449_18125 PF01551 Peptidase family M23 PF449_18135 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PF449_18140 PF00091 Tubulin/FtsZ family, GTPase domain PF449_18140 PF12327 FtsZ family, C-terminal domain PF449_18145 PF02491 SHS2 domain inserted in FTSA PF449_18150 PF08478 POTRA domain, FtsQ-type PF449_18150 PF03799 Cell division protein FtsQ PF449_18155 PF01820 D-ala D-ala ligase N-terminus PF449_18155 PF07478 D-ala D-ala ligase C-terminus PF449_18160 PF01225 Mur ligase family, catalytic domain PF449_18160 PF02875 Mur ligase family, glutamate ligase domain PF449_18160 PF08245 Mur ligase middle domain PF449_18165 PF04101 Glycosyltransferase family 28 C-terminal domain PF449_18165 PF03033 Glycosyltransferase family 28 N-terminal domain PF449_18170 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PF449_18170 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PF449_18180 PF07715 TonB-dependent Receptor Plug Domain PF449_18180 PF00593 TonB dependent receptor PF449_18185 PF00156 Phosphoribosyl transferase domain PF449_18190 PF03372 Endonuclease/Exonuclease/phosphatase family PF449_18195 PF03960 ArsC family PF449_18205 PF07859 alpha/beta hydrolase fold PF449_18210 PF07694 5TMR of 5TMR-LYT PF449_18210 PF00990 Diguanylate cyclase, GGDEF domain PF449_18215 PF11412 Disulphide bond corrector protein DsbC PF449_18215 PF02683 Cytochrome C biogenesis protein transmembrane region PF449_18245 PF00576 HIUase/Transthyretin family PF449_18250 PF00860 Permease family PF449_18260 PF01494 FAD binding domain PF449_18265 PF03561 Allantoicase repeat PF449_18270 PF04115 Ureidoglycolate lyase PF449_18275 PF00204 DNA gyrase B PF449_18275 PF00986 DNA gyrase B subunit, carboxyl terminus PF449_18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_18275 PF01751 Toprim domain PF449_18280 PF05728 Uncharacterised protein family (UPF0227) PF449_18300 PF02600 Disulfide bond formation protein DsbB PF449_18305 PF04262 Glutamate-cysteine ligase PF449_18320 PF04286 Protein of unknown function (DUF445) PF449_18325 PF00155 Aminotransferase class I and II PF449_18345 PF00106 short chain dehydrogenase PF449_18355 PF00486 Transcriptional regulatory protein, C terminal PF449_18355 PF00072 Response regulator receiver domain PF449_18360 PF11808 Phosphate regulon sensor protein PhoR PF449_18360 PF00512 His Kinase A (phospho-acceptor) domain PF449_18360 PF00989 PAS fold PF449_18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF449_18370 PF02666 Phosphatidylserine decarboxylase PF449_18375 PF00581 Rhodanese-like domain PF449_18380 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PF449_18380 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PF449_18385 PF02580 D-Tyr-tRNA(Tyr) deacylase PF449_18410 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PF449_18410 PF00925 GTP cyclohydrolase II PF449_18415 PF00885 6,7-dimethyl-8-ribityllumazine synthase PF449_18420 PF01029 NusB family PF449_18425 PF00586 AIR synthase related protein, N-terminal domain PF449_18425 PF02769 AIR synthase related protein, C-terminal domain PF449_18430 PF04608 Phosphatidylglycerophosphatase A PF449_18435 PF14602 Hexapeptide repeat of succinyl-transferase PF449_18435 PF12804 MobA-like NTP transferase domain PF449_18435 PF00132 Bacterial transferase hexapeptide (six repeats) PF449_18440 PF01380 SIS domain PF449_18445 PF01494 FAD binding domain PF449_18465 PF01810 LysE type translocator PF449_18470 PF01177 Asp/Glu/Hydantoin racemase PF449_18485 PF00491 Arginase family PF449_18490 PF01979 Amidohydrolase family PF449_18495 PF00324 Amino acid permease PF449_18500 PF00221 Aromatic amino acid lyase PF449_18505 PF17391 Urocanase N-terminal domain PF449_18505 PF17392 Urocanase C-terminal domain PF449_18505 PF01175 Urocanase Rossmann-like domain PF449_18510 PF05962 HutD PF449_18515 PF07702 UTRA domain PF449_18515 PF00392 Bacterial regulatory proteins, gntR family PF449_18525 PF02492 CobW/HypB/UreG, nucleotide-binding domain PF449_18525 PF07683 Cobalamin synthesis protein cobW C-terminal domain PF449_18535 PF00324 Amino acid permease PF449_18545 PF02798 Glutathione S-transferase, N-terminal domain PF449_18545 PF14497 Glutathione S-transferase, C-terminal domain PF449_18550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF449_18560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF449_18565 PF04463 Protein of unknown function (DUF523) PF449_18570 PF01554 MatE PF449_18575 PF01758 Sodium Bile acid symporter family PF449_18580 PF00857 Isochorismatase family PF449_18585 PF00701 Dihydrodipicolinate synthetase family PF449_18595 PF01259 SAICAR synthetase PF449_18605 PF01226 Formate/nitrite transporter PF449_18610 PF12002 MgsA AAA+ ATPase C terminal PF449_18610 PF16193 AAA C-terminal domain PF449_18610 PF00004 ATPase family associated with various cellular activities (AAA) PF449_18630 PF00577 Outer membrane usher protein PF449_18630 PF13953 PapC C-terminal domain PF449_18630 PF13954 PapC N-terminal domain PF449_18635 PF02753 Pili assembly chaperone PapD, C-terminal domain PF449_18635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PF449_18640 PF00419 Fimbrial protein PF449_18645 PF03692 Putative zinc- or iron-chelating domain PF449_18650 PF07043 Protein of unknown function (DUF1328) PF449_18665 PF00730 HhH-GPD superfamily base excision DNA repair protein PF449_18665 PF10576 Iron-sulfur binding domain of endonuclease III PF449_18665 PF14815 NUDIX domain PF449_18665 PF00633 Helix-hairpin-helix motif PF449_18680 PF03352 Methyladenine glycosylase PF449_18685 PF08240 Alcohol dehydrogenase GroES-like domain PF449_18685 PF00107 Zinc-binding dehydrogenase PF449_18690 PF00392 Bacterial regulatory proteins, gntR family PF449_18690 PF00155 Aminotransferase class I and II PF449_18705 PF03466 LysR substrate binding domain PF449_18705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_18710 PF00248 Aldo/keto reductase family PF449_18715 PF07690 Major Facilitator Superfamily PF449_18725 PF01113 Dihydrodipicolinate reductase, N-terminus PF449_18725 PF05173 Dihydrodipicolinate reductase, C-terminus PF449_18735 PF00684 DnaJ central domain PF449_18735 PF01556 DnaJ C terminal domain PF449_18735 PF00226 DnaJ domain PF449_18745 PF00873 AcrB/AcrD/AcrF family PF449_18750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF449_18755 PF00440 Bacterial regulatory proteins, tetR family PF449_18755 PF08361 MAATS-type transcriptional repressor, C-terminal region PF449_18760 PF00311 Phosphoenolpyruvate carboxylase PF449_18765 PF00860 Permease family PF449_18770 PF03466 LysR substrate binding domain PF449_18770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_18785 PF00920 Dehydratase family PF449_18790 PF00551 Formyl transferase PF449_18790 PF02911 Formyl transferase, C-terminal domain PF449_18795 PF01029 NusB family PF449_18795 PF01189 16S rRNA methyltransferase RsmB/F PF449_18805 PF00209 Sodium:neurotransmitter symporter family PF449_18845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PF449_18850 PF07859 alpha/beta hydrolase fold PF449_18870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF449_18870 PF03466 LysR substrate binding domain PF449_18875 PF01025 GrpE PF449_18880 PF00012 Hsp70 protein PF449_18900 PF13406 Transglycosylase SLT domain PF449_18905 PF02222 ATP-grasp domain PF449_18905 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PF449_18910 PF00731 AIR carboxylase PF449_18920 PF01225 Mur ligase family, catalytic domain PF449_18920 PF08245 Mur ligase middle domain PF449_18920 PF02875 Mur ligase family, glutamate ligase domain PF449_18930 PF01569 PAP2 superfamily PF449_18935 PF03741 Integral membrane protein TerC family PF449_18945 PF03738 Glutathionylspermidine synthase preATP-grasp PF449_18950 PF00355 Rieske [2Fe-2S] domain PF449_18955 PF01979 Amidohydrolase family PF449_18960 PF00156 Phosphoribosyl transferase domain PF449_18970 PF10411 Disulfide bond isomerase protein N-terminus PF449_18970 PF13098 Thioredoxin-like domain PF449_18975 PF16916 Dimerisation domain of Zinc Transporter PF449_18975 PF01545 Cation efflux family PF449_18980 PF02583 Metal-sensitive transcriptional repressor PF449_18985 PF12631 MnmE helical domain PF449_18985 PF10396 GTP-binding protein TrmE N-terminus PF449_18985 PF01926 50S ribosome-binding GTPase PF449_18990 PF14849 YidC periplasmic domain PF449_18990 PF02096 60Kd inner membrane protein PF449_18995 PF01809 Putative membrane protein insertion efficiency factor PF449_19000 PF00825 Ribonuclease P PF449_19005 PF00468 Ribosomal protein L34 PF449_19060 PF00565 Staphylococcal nuclease homologue PF449_19070 PF00816 H-NS histone family PF449_19130 PF13614 AAA domain PF449_19135 PF17762 HTH domain found in ParB protein PF449_19135 PF02195 ParB-like nuclease domain PF449_19150 PF05816 Toxic anion resistance protein (TelA) PF449_19255 PF00684 DnaJ central domain PF449_19255 PF01556 DnaJ C terminal domain PF449_19255 PF00226 DnaJ domain PF449_19290 PF18272 single-stranded DNA binding TraI N-terminal subdomain PF449_19290 PF07057 DNA helicase TraI PF449_19290 PF18340 DNA relaxase TraI 2B/2B-like domain PF449_19290 PF08751 TrwC relaxase PF449_19330 PF00239 Resolvase, N terminal domain PF449_19330 PF02796 Helix-turn-helix domain of resolvase PF449_19345 PF01464 Transglycosylase SLT domain PF449_19380 PF10411 Disulfide bond isomerase protein N-terminus PF449_19380 PF13098 Thioredoxin-like domain PF449_19415 PF06834 TraU protein PF449_19425 PF06986 Type-1V conjugative transfer system mating pair stabilisation PF449_19440 PF06122 Conjugative relaxosome accessory transposon protein PF449_19460 PF11799 impB/mucB/samB family C-terminal domain PF449_19460 PF00817 impB/mucB/samB family PF449_19460 PF13438 Domain of unknown function (DUF4113) PF449_19505 PF01443 Viral (Superfamily 1) RNA helicase PF449_19505 PF17841 BID domain of Bartonella effector protein (Bep) PF449_19505 PF03389 MobA/MobL family PF449_19545 PF00582 Universal stress protein family PF449_19550 PF01740 STAS domain PF449_19550 PF00916 Sulfate permease family PF449_19555 PF05973 Phage derived protein Gp49-like (DUF891) PF449_19575 PF00593 TonB dependent receptor PF449_19575 PF07715 TonB-dependent Receptor Plug Domain