locus-tag class description PF364_00005 PF00308 Bacterial dnaA protein PF364_00005 PF08299 Bacterial dnaA protein helix-turn-helix PF364_00005 PF11638 DnaA N-terminal domain PF364_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain PF364_00010 PF02767 DNA polymerase III beta subunit, central domain PF364_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain PF364_00015 PF02463 RecF/RecN/SMC N terminal domain PF364_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_00020 PF18053 DNA gyrase B subunit insert domain PF364_00020 PF01751 Toprim domain PF364_00020 PF00204 DNA gyrase B PF364_00020 PF00986 DNA gyrase B subunit, carboxyl terminus PF364_00030 PF09335 SNARE associated Golgi protein PF364_00035 PF00005 ABC transporter PF364_00035 PF12848 ABC transporter PF364_00055 PF01521 Iron-sulphur cluster biosynthesis PF364_00060 PF00561 alpha/beta hydrolase fold PF364_00065 PF03702 Anhydro-N-acetylmuramic acid kinase PF364_00070 PF00579 tRNA synthetases class I (W and Y) PF364_00110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF364_00115 PF01252 Signal peptidase (SPase) II PF364_00120 PF00133 tRNA synthetases class I (I, L, M and V) PF364_00120 PF08264 Anticodon-binding domain of tRNA PF364_00120 PF06827 Zinc finger found in FPG and IleRS PF364_00125 PF06574 FAD synthetase PF364_00125 PF01687 Riboflavin kinase PF364_00135 PF01048 Phosphorylase superfamily PF364_00140 PF08362 YcdC-like protein, C-terminal region PF364_00140 PF00440 Bacterial regulatory proteins, tetR family PF364_00145 PF00005 ABC transporter PF364_00150 PF00528 Binding-protein-dependent transport system inner membrane component PF364_00160 PF13610 DDE domain PF364_00170 PF12848 ABC transporter PF364_00170 PF00005 ABC transporter PF364_00175 PF13610 DDE domain PF364_00180 PF13610 DDE domain PF364_00185 PF00809 Pterin binding enzyme PF364_00190 PF00893 Small Multidrug Resistance protein PF364_00195 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_00200 PF10706 Aminoglycoside-2''-adenylyltransferase PF364_00205 PF00589 Phage integrase family PF364_00205 PF13495 Phage integrase, N-terminal SAM-like domain PF364_00220 PF00533 BRCA1 C Terminus (BRCT) domain PF364_00220 PF03120 NAD-dependent DNA ligase OB-fold domain PF364_00220 PF01653 NAD-dependent DNA ligase adenylation domain PF364_00220 PF12826 Helix-hairpin-helix motif PF364_00220 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PF364_00230 PF00809 Pterin binding enzyme PF364_00235 PF00893 Small Multidrug Resistance protein PF364_00240 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_00245 PF07690 Major Facilitator Superfamily PF364_00265 PF13610 DDE domain PF364_00270 PF00583 Acetyltransferase (GNAT) family PF364_00270 PF00696 Amino acid kinase family PF364_00285 PF00106 short chain dehydrogenase PF364_00290 PF13419 Haloacid dehalogenase-like hydrolase PF364_00300 PF01323 DSBA-like thioredoxin domain PF364_00305 PF08360 QacR-like protein, C-terminal region PF364_00305 PF00440 Bacterial regulatory proteins, tetR family PF364_00310 PF00440 Bacterial regulatory proteins, tetR family PF364_00315 PF00970 Oxidoreductase FAD-binding domain PF364_00315 PF00042 Globin PF364_00315 PF00175 Oxidoreductase NAD-binding domain PF364_00320 PF00487 Fatty acid desaturase PF364_00325 PF03725 3' exoribonuclease family, domain 2 PF364_00325 PF01138 3' exoribonuclease family, domain 1 PF364_00335 PF04185 Phosphoesterase family PF364_00335 PF05506 Domain of unknown function (DUF756) PF364_00345 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PF364_00345 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PF364_00350 PF01510 N-acetylmuramoyl-L-alanine amidase PF364_00355 PF03023 Lipid II flippase MurJ PF364_00360 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PF364_00360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF364_00365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF364_00365 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PF364_00370 PF13807 G-rich domain on putative tyrosine kinase PF364_00370 PF02706 Chain length determinant protein PF364_00370 PF13614 AAA domain PF364_00375 PF01451 Low molecular weight phosphotyrosine protein phosphatase PF364_00380 PF02563 Polysaccharide biosynthesis/export protein PF364_00380 PF10531 SLBB domain PF364_00380 PF18412 Outer-membrane lipoprotein Wza C-terminal domain PF364_00385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PF364_00385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PF364_00385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PF364_00390 PF01370 NAD dependent epimerase/dehydratase family PF364_00405 PF00534 Glycosyl transferases group 1 PF364_00405 PF13439 Glycosyltransferase Family 4 PF364_00435 PF00905 Penicillin binding protein transpeptidase domain PF364_00460 PF00534 Glycosyl transferases group 1 PF364_00460 PF13477 Glycosyl transferase 4-like PF364_00465 PF02397 Bacterial sugar transferase PF364_00470 PF14602 Hexapeptide repeat of succinyl-transferase PF364_00470 PF17836 PglD N-terminal domain PF364_00470 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_00475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PF364_00480 PF02719 Polysaccharide biosynthesis protein PF364_00485 PF00483 Nucleotidyl transferase PF364_00490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PF364_00490 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PF364_00490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PF364_00495 PF00342 Phosphoglucose isomerase PF364_00500 PF16363 GDP-mannose 4,6 dehydratase PF364_00505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF364_00505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PF364_00505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF364_00505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF364_00510 PF02652 L-lactate permease PF364_00515 PF07729 FCD domain PF364_00515 PF00392 Bacterial regulatory proteins, gntR family PF364_00520 PF01070 FMN-dependent dehydrogenase PF364_00525 PF09330 D-lactate dehydrogenase, membrane binding PF364_00525 PF01565 FAD binding domain PF364_00530 PF00155 Aminotransferase class I and II PF364_00540 PF00392 Bacterial regulatory proteins, gntR family PF364_00540 PF07729 FCD domain PF364_00550 PF00285 Citrate synthase, C-terminal domain PF364_00555 PF00330 Aconitase family (aconitate hydratase) PF364_00555 PF00694 Aconitase C-terminal domain PF364_00575 PF00293 NUDIX domain PF364_00605 PF00849 RNA pseudouridylate synthase PF364_00620 PF00593 TonB dependent receptor PF364_00620 PF07715 TonB-dependent Receptor Plug Domain PF364_00630 PF01037 Lrp/AsnC ligand binding domain PF364_00635 PF01266 FAD dependent oxidoreductase PF364_00640 PF01168 Alanine racemase, N-terminal domain PF364_00640 PF00842 Alanine racemase, C-terminal domain PF364_00645 PF01042 Endoribonuclease L-PSP PF364_00650 PF00324 Amino acid permease PF364_00655 PF00324 Amino acid permease PF364_00665 PF00171 Aldehyde dehydrogenase family PF364_00670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PF364_00670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PF364_00675 PF00501 AMP-binding enzyme PF364_00675 PF13193 AMP-binding enzyme C-terminal domain PF364_00680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_00680 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_00680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_00685 PF00378 Enoyl-CoA hydratase/isomerase PF364_00690 PF00378 Enoyl-CoA hydratase/isomerase PF364_00695 PF07690 Major Facilitator Superfamily PF364_00695 PF00083 Sugar (and other) transporter PF364_00700 PF00765 Autoinducer synthase PF364_00710 PF03472 Autoinducer binding domain PF364_00710 PF00196 Bacterial regulatory proteins, luxR family PF364_00715 PF00501 AMP-binding enzyme PF364_00720 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_00720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_00720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_00725 PF08242 Methyltransferase domain PF364_00725 PF02801 Beta-ketoacyl synthase, C-terminal domain PF364_00725 PF00109 Beta-ketoacyl synthase, N-terminal domain PF364_00725 PF16197 Ketoacyl-synthetase C-terminal extension PF364_00725 PF00975 Thioesterase domain PF364_00725 PF14765 Polyketide synthase dehydratase PF364_00725 PF00550 Phosphopantetheine attachment site PF364_00745 PF12697 Alpha/beta hydrolase family PF364_00750 PF01648 4'-phosphopantetheinyl transferase superfamily PF364_00765 PF01722 BolA-like protein PF364_00775 PF13614 AAA domain PF364_00790 PF09335 SNARE associated Golgi protein PF364_00795 PF07681 DoxX PF364_00800 PF04286 Protein of unknown function (DUF445) PF364_00805 PF02540 NAD synthase PF364_00805 PF00958 GMP synthase C terminal domain PF364_00805 PF00117 Glutamine amidotransferase class-I PF364_00810 PF01909 Nucleotidyltransferase domain PF364_00810 PF13427 Domain of unknown function (DUF4111) PF364_00815 PF03551 Transcriptional regulator PadR-like family PF364_00825 PF05726 Pirin C-terminal cupin domain PF364_00825 PF02678 Pirin PF364_00845 PF05746 DALR anticodon binding domain PF364_00845 PF03485 Arginyl tRNA synthetase N terminal domain PF364_00845 PF00750 tRNA synthetases class I (R) PF364_00850 PF03949 Malic enzyme, NAD binding domain PF364_00850 PF00390 Malic enzyme, N-terminal domain PF364_00860 PF04261 Dyp-type peroxidase family PF364_00865 PF01810 LysE type translocator PF364_00870 PF00950 ABC 3 transport family PF364_00875 PF00005 ABC transporter PF364_00895 PF00119 ATP synthase A chain PF364_00900 PF00137 ATP synthase subunit C PF364_00905 PF00430 ATP synthase B/B' CF(0) PF364_00910 PF00213 ATP synthase delta (OSCP) subunit PF364_00915 PF00306 ATP synthase alpha/beta chain, C terminal domain PF364_00915 PF02874 ATP synthase alpha/beta family, beta-barrel domain PF364_00915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PF364_00920 PF00231 ATP synthase PF364_00925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PF364_00925 PF02874 ATP synthase alpha/beta family, beta-barrel domain PF364_00930 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PF364_00940 PF00255 Glutathione peroxidase PF364_00950 PF07690 Major Facilitator Superfamily PF364_00955 PF00440 Bacterial regulatory proteins, tetR family PF364_00960 PF00892 EamA-like transporter family PF364_00965 PF01300 Telomere recombination PF364_00970 PF02481 DNA recombination-mediator protein A PF364_00970 PF17782 DprA winged helix domain PF364_00980 PF01327 Polypeptide deformylase PF364_01040 PF00291 Pyridoxal-phosphate dependent enzyme PF364_01050 PF03358 NADPH-dependent FMN reductase PF364_01070 PF08497 Radical SAM N-terminal PF364_01070 PF11842 Domain of unknown function (DUF3362) PF364_01070 PF04055 Radical SAM superfamily PF364_01090 PF11798 IMS family HHH motif PF364_01090 PF11799 impB/mucB/samB family C-terminal domain PF364_01090 PF00817 impB/mucB/samB family PF364_01095 PF01183 Glycosyl hydrolases family 25 PF364_01100 PF07690 Major Facilitator Superfamily PF364_01105 PF03641 Possible lysine decarboxylase PF364_01110 PF03471 Transporter associated domain PF364_01110 PF03741 Integral membrane protein TerC family PF364_01115 PF02810 SEC-C motif PF364_01120 PF03458 UPF0126 domain PF364_01125 PF07690 Major Facilitator Superfamily PF364_01130 PF03989 DNA gyrase C-terminal domain, beta-propeller PF364_01130 PF00521 DNA gyrase/topoisomerase IV, subunit A PF364_01135 PF13193 AMP-binding enzyme C-terminal domain PF364_01135 PF00501 AMP-binding enzyme PF364_01150 PF00719 Inorganic pyrophosphatase PF364_01155 PF03573 outer membrane porin, OprD family PF364_01180 PF00905 Penicillin binding protein transpeptidase domain PF364_01205 PF00543 Nitrogen regulatory protein P-II PF364_01210 PF00909 Ammonium Transporter Family PF364_01215 PF03477 ATP cone domain PF364_01220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PF364_01220 PF01872 RibD C-terminal domain PF364_01230 PF00677 Lumazine binding domain PF364_01250 PF02789 Cytosol aminopeptidase family, N-terminal domain PF364_01250 PF00883 Cytosol aminopeptidase family, catalytic domain PF364_01260 PF03739 Lipopolysaccharide export system permease LptF/LptG PF364_01265 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PF364_01265 PF01676 Metalloenzyme superfamily PF364_01270 PF00595 PDZ domain PF364_01270 PF03572 Peptidase family S41 PF364_01275 PF00158 Sigma-54 interaction domain PF364_01275 PF00072 Response regulator receiver domain PF364_01275 PF02954 Bacterial regulatory protein, Fis family PF364_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_01280 PF00512 His Kinase A (phospho-acceptor) domain PF364_01285 PF00196 Bacterial regulatory proteins, luxR family PF364_01285 PF00072 Response regulator receiver domain PF364_01290 PF00768 D-alanyl-D-alanine carboxypeptidase PF364_01295 PF00291 Pyridoxal-phosphate dependent enzyme PF364_01300 PF03447 Homoserine dehydrogenase, NAD binding domain PF364_01300 PF01842 ACT domain PF364_01300 PF00742 Homoserine dehydrogenase PF364_01305 PF13098 Thioredoxin-like domain PF364_01305 PF10411 Disulfide bond isomerase protein N-terminus PF364_01310 PF02899 Phage integrase, N-terminal SAM-like domain PF364_01310 PF00589 Phage integrase family PF364_01320 PF02421 Ferrous iron transport protein B PF364_01320 PF07670 Nucleoside recognition PF364_01320 PF07664 Ferrous iron transport protein B C terminus PF364_01330 PF02875 Mur ligase family, glutamate ligase domain PF364_01330 PF08245 Mur ligase middle domain PF364_01335 PF01098 Cell cycle protein PF364_01340 PF00749 tRNA synthetases class I (E and Q), catalytic domain PF364_01345 PF01258 Prokaryotic dksA/traR C4-type zinc finger PF364_01350 PF00149 Calcineurin-like phosphoesterase PF364_01355 PF00293 NUDIX domain PF364_01360 PF13667 ThiC-associated domain PF364_01360 PF01964 Radical SAM ThiC family PF364_01380 PF02321 Outer membrane efflux protein PF364_01385 PF01895 PhoU domain PF364_01390 PF04362 Bacterial Fe(2+) trafficking PF364_01395 PF00206 Lyase PF364_01395 PF14698 Argininosuccinate lyase C-terminal PF364_01400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_01400 PF07694 5TMR of 5TMR-LYT PF364_01400 PF06580 Histidine kinase PF364_01405 PF04397 LytTr DNA-binding domain PF364_01405 PF00072 Response regulator receiver domain PF364_01410 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PF364_01410 PF03900 Porphobilinogen deaminase, C-terminal domain PF364_01435 PF00816 H-NS histone family PF364_01450 PF00263 Bacterial type II and III secretion system protein PF364_01450 PF03958 Bacterial type II/III secretion system short domain PF364_01455 PF12401 Protein of unknown function (DUF2662) PF364_01455 PF00498 FHA domain PF364_01460 PF13419 Haloacid dehalogenase-like hydrolase PF364_01465 PF04715 Anthranilate synthase component I, N terminal region PF364_01465 PF00425 chorismate binding enzyme PF364_01490 PF03144 Elongation factor Tu domain 2 PF364_01490 PF03143 Elongation factor Tu C-terminal domain PF364_01490 PF00009 Elongation factor Tu GTP binding domain PF364_01500 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PF364_01505 PF02357 Transcription termination factor nusG PF364_01505 PF00467 KOW motif PF364_01510 PF00298 Ribosomal protein L11, RNA binding domain PF364_01510 PF03946 Ribosomal protein L11, N-terminal domain PF364_01515 PF00687 Ribosomal protein L1p/L10e family PF364_01520 PF00466 Ribosomal protein L10 PF364_01525 PF16320 Ribosomal protein L7/L12 dimerisation domain PF364_01525 PF00542 Ribosomal protein L7/L12 C-terminal domain PF364_01530 PF04563 RNA polymerase beta subunit PF364_01530 PF04561 RNA polymerase Rpb2, domain 2 PF364_01530 PF04565 RNA polymerase Rpb2, domain 3 PF364_01530 PF10385 RNA polymerase beta subunit external 1 domain PF364_01530 PF00562 RNA polymerase Rpb2, domain 6 PF364_01530 PF04560 RNA polymerase Rpb2, domain 7 PF364_01535 PF04997 RNA polymerase Rpb1, domain 1 PF364_01535 PF00623 RNA polymerase Rpb1, domain 2 PF364_01535 PF04983 RNA polymerase Rpb1, domain 3 PF364_01535 PF05000 RNA polymerase Rpb1, domain 4 PF364_01535 PF04998 RNA polymerase Rpb1, domain 5 PF364_01560 PF03553 Na+/H+ antiporter family PF364_01560 PF13726 Na+-H+ antiporter family PF364_01575 PF00183 Hsp90 protein PF364_01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_01590 PF01323 DSBA-like thioredoxin domain PF364_01600 PF00376 MerR family regulatory protein PF364_01600 PF09278 MerR, DNA binding PF364_01615 PF00108 Thiolase, N-terminal domain PF364_01615 PF02803 Thiolase, C-terminal domain PF364_01620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF364_01620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF364_01620 PF00378 Enoyl-CoA hydratase/isomerase PF364_01640 PF01541 GIY-YIG catalytic domain PF364_01640 PF02151 UvrB/uvrC motif PF364_01640 PF08459 UvrC Helix-hairpin-helix N-terminal PF364_01650 PF01066 CDP-alcohol phosphatidyltransferase PF364_01655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PF364_01655 PF12833 Helix-turn-helix domain PF364_01655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PF364_01655 PF02805 Metal binding domain of Ada PF364_01680 PF13533 Biotin-lipoyl like PF364_01685 PF03652 Holliday junction resolvase PF364_01690 PF02622 Uncharacterized ACR, COG1678 PF364_01695 PF02463 RecF/RecN/SMC N terminal domain PF364_01705 PF06865 Pyrimidine/purine nucleoside phosphorylase PF364_01710 PF00588 SpoU rRNA Methylase family PF364_01710 PF08032 RNA 2'-O ribose methyltransferase substrate binding PF364_01720 PF01121 Dephospho-CoA kinase PF364_01725 PF06750 Bacterial Peptidase A24 N-terminal domain PF364_01725 PF01478 Type IV leader peptidase family PF364_01730 PF00482 Type II secretion system (T2SS), protein F PF364_01735 PF00437 Type II/IV secretion system protein PF364_01735 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PF364_01740 PF00121 Triosephosphate isomerase PF364_01745 PF03840 Preprotein translocase SecG subunit PF364_01765 PF02576 RimP N-terminal domain PF364_01765 PF17384 RimP C-terminal SH3 domain PF364_01770 PF00575 S1 RNA binding domain PF364_01770 PF13184 NusA-like KH domain PF364_01770 PF08529 NusA N-terminal domain PF364_01775 PF00009 Elongation factor Tu GTP binding domain PF364_01775 PF11987 Translation-initiation factor 2 PF364_01775 PF08364 Bacterial translation initiation factor IF-2 associated region PF364_01775 PF04760 Translation initiation factor IF-2, N-terminal region PF364_01780 PF02033 Ribosome-binding factor A PF364_01785 PF03334 Na+/H+ antiporter subunit PF364_01790 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) PF364_01795 PF01899 Na+/H+ ion antiporter subunit PF364_01800 PF00361 Proton-conducting membrane transporter PF364_01805 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PF364_01810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PF364_01810 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter PF364_01810 PF13244 Domain of unknown function (DUF4040) PF364_01810 PF00361 Proton-conducting membrane transporter PF364_01825 PF01502 Phosphoribosyl-AMP cyclohydrolase PF364_01830 PF01494 FAD binding domain PF364_01835 PF03109 ABC1 family PF364_01845 PF01209 ubiE/COQ5 methyltransferase family PF364_01855 PF03976 Polyphosphate kinase 2 (PPK2) PF364_01865 PF17946 RecC C-terminal domain PF364_01870 PF12705 PD-(D/E)XK nuclease superfamily PF364_01870 PF00580 UvrD/REP helicase N-terminal domain PF364_01870 PF13361 UvrD-like helicase C-terminal domain PF364_01875 PF13538 UvrD-like helicase C-terminal domain PF364_01880 PF00144 Beta-lactamase PF364_01885 PF00312 Ribosomal protein S15 PF364_01890 PF00013 KH domain PF364_01890 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PF364_01890 PF01138 3' exoribonuclease family, domain 1 PF364_01890 PF03725 3' exoribonuclease family, domain 2 PF364_01890 PF00575 S1 RNA binding domain PF364_01895 PF01544 CorA-like Mg2+ transporter protein PF364_01905 PF00226 DnaJ domain PF364_01905 PF01556 DnaJ C terminal domain PF364_01915 PF01430 Hsp33 protein PF364_01920 PF02254 TrkA-N domain PF364_01920 PF00999 Sodium/hydrogen exchanger family PF364_01925 PF00270 DEAD/DEAH box helicase PF364_01925 PF00271 Helicase conserved C-terminal domain PF364_01925 PF18074 Primosomal protein N C-terminal domain PF364_01925 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PF364_01925 PF17764 3′ DNA-binding domain (3′BD) PF364_01930 PF00482 Type II secretion system (T2SS), protein F PF364_01935 PF07963 Prokaryotic N-terminal methylation motif PF364_01935 PF08334 Type II secretion system (T2SS), protein G PF364_01945 PF01588 Putative tRNA binding domain PF364_01950 PF00795 Carbon-nitrogen hydrolase PF364_01955 PF00571 CBS domain PF364_01955 PF03471 Transporter associated domain PF364_01960 PF01206 Sulfurtransferase TusA PF364_01980 PF01177 Asp/Glu/Hydantoin racemase PF364_01990 PF00762 Ferrochelatase PF364_01995 PF00753 Metallo-beta-lactamase superfamily PF364_02000 PF03884 DNA gyrase inhibitor YacG PF364_02010 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PF364_02010 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_02010 PF13247 4Fe-4S dicluster domain PF364_02020 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PF364_02030 PF01197 Ribosomal protein L31 PF364_02035 PF03109 ABC1 family PF364_02040 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF364_02040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_02045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF364_02045 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_02045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_02050 PF01554 MatE PF364_02060 PF04055 Radical SAM superfamily PF364_02060 PF06969 HemN C-terminal domain PF364_02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_02070 PF03466 LysR substrate binding domain PF364_02085 PF13193 AMP-binding enzyme C-terminal domain PF364_02085 PF00501 AMP-binding enzyme PF364_02090 PF10150 Ribonuclease E/G family PF364_02090 PF00575 S1 RNA binding domain PF364_02090 PF12111 Polyribonucleotide phosphorylase C terminal PF364_02095 PF01479 S4 domain PF364_02095 PF00849 RNA pseudouridylate synthase PF364_02115 PF08279 HTH domain PF364_02115 PF13280 WYL domain PF364_02120 PF02798 Glutathione S-transferase, N-terminal domain PF364_02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_02130 PF03466 LysR substrate binding domain PF364_02135 PF12706 Beta-lactamase superfamily domain PF364_02145 PF00141 Peroxidase PF364_02150 PF05524 PEP-utilising enzyme, N-terminal PF364_02150 PF00391 PEP-utilising enzyme, mobile domain PF364_02150 PF02896 PEP-utilising enzyme, TIM barrel domain PF364_02150 PF01590 GAF domain PF364_02155 PF00293 NUDIX domain PF364_02165 PF03466 LysR substrate binding domain PF364_02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_02175 PF00330 Aconitase family (aconitate hydratase) PF364_02180 PF00694 Aconitase C-terminal domain PF364_02190 PF00180 Isocitrate/isopropylmalate dehydrogenase PF364_02205 PF01176 Translation initiation factor 1A / IF-1 PF364_02215 PF01416 tRNA pseudouridine synthase PF364_02235 PF01118 Semialdehyde dehydrogenase, NAD binding domain PF364_02235 PF02774 Semialdehyde dehydrogenase, dimerisation domain PF364_02245 PF00375 Sodium:dicarboxylate symporter family PF364_02255 PF03279 Bacterial lipid A biosynthesis acyltransferase PF364_02260 PF01810 LysE type translocator PF364_02265 PF00005 ABC transporter PF364_02265 PF16326 ABC transporter C-terminal domain PF364_02265 PF12848 ABC transporter PF364_02270 PF04102 SlyX PF364_02275 PF08240 Alcohol dehydrogenase GroES-like domain PF364_02275 PF00107 Zinc-binding dehydrogenase PF364_02280 PF01638 HxlR-like helix-turn-helix PF364_02290 PF01396 Topoisomerase DNA binding C4 zinc finger PF364_02290 PF01131 DNA topoisomerase PF364_02290 PF08272 Topoisomerase I zinc-ribbon-like PF364_02290 PF01751 Toprim domain PF364_02305 PF00580 UvrD/REP helicase N-terminal domain PF364_02305 PF13361 UvrD-like helicase C-terminal domain PF364_02310 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF364_02330 PF00999 Sodium/hydrogen exchanger family PF364_02330 PF02254 TrkA-N domain PF364_02335 PF00471 Ribosomal protein L33 PF364_02340 PF00830 Ribosomal L28 family PF364_02345 PF00171 Aldehyde dehydrogenase family PF364_02355 PF01842 ACT domain PF364_02355 PF00551 Formyl transferase PF364_02365 PF01618 MotA/TolQ/ExbB proton channel family PF364_02375 PF01625 Peptide methionine sulfoxide reductase PF364_02385 PF00186 Dihydrofolate reductase PF364_02390 PF00303 Thymidylate synthase PF364_02405 PF01790 Prolipoprotein diacylglyceryl transferase PF364_02425 PF00902 Sec-independent protein translocase protein (TatC) PF364_02430 PF02416 mttA/Hcf106 family PF364_02435 PF02416 mttA/Hcf106 family PF364_02445 PF01725 Ham1 family PF364_02455 PF07021 Methionine biosynthesis protein MetW PF364_02455 PF00561 alpha/beta hydrolase fold PF364_02460 PF00561 alpha/beta hydrolase fold PF364_02465 PF08502 LeuA allosteric (dimerisation) domain PF364_02465 PF00682 HMGL-like PF364_02470 PF13640 2OG-Fe(II) oxygenase superfamily PF364_02470 PF18331 PKHD-type hydroxylase C-terminal domain PF364_02475 PF00593 TonB dependent receptor PF364_02475 PF07715 TonB-dependent Receptor Plug Domain PF364_02480 PF05698 Bacterial trigger factor protein (TF) C-terminus PF364_02480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF364_02480 PF05697 Bacterial trigger factor protein (TF) PF364_02485 PF00574 Clp protease PF364_02490 PF06689 ClpX C4-type zinc finger PF364_02490 PF10431 C-terminal, D2-small domain, of ClpB protein PF364_02490 PF07724 AAA domain (Cdc48 subfamily) PF364_02505 PF05683 Fumarase C-terminus PF364_02505 PF05681 Fumarate hydratase (Fumerase) PF364_02510 PF07085 DRTGG domain PF364_02510 PF01515 Phosphate acetyl/butaryl transferase PF364_02515 PF00871 Acetokinase family PF364_02520 PF00920 Dehydratase family PF364_02525 PF01081 KDPG and KHG aldolase PF364_02530 PF02447 GntP family permease PF364_02535 PF01202 Shikimate kinase PF364_02540 PF00171 Aldehyde dehydrogenase family PF364_02545 PF00171 Aldehyde dehydrogenase family PF364_02550 PF00561 alpha/beta hydrolase fold PF364_02560 PF00933 Glycosyl hydrolase family 3 N terminal domain PF364_02565 PF11818 C-terminal domain of tail specific protease (DUF3340) PF364_02565 PF00595 PDZ domain PF364_02565 PF03572 Peptidase family S41 PF364_02565 PF17804 Tail specific protease N-terminal domain PF364_02570 PF13439 Glycosyltransferase Family 4 PF364_02570 PF00534 Glycosyl transferases group 1 PF364_02575 PF01569 PAP2 superfamily PF364_02580 PF04384 Iron-sulphur cluster assembly PF364_02585 PF00334 Nucleoside diphosphate kinase PF364_02590 PF04055 Radical SAM superfamily PF364_02600 PF13464 Domain of unknown function (DUF4115) PF364_02605 PF04551 GcpE protein PF364_02610 PF13393 Histidyl-tRNA synthetase PF364_02610 PF03129 Anticodon binding domain PF364_02620 PF13360 PQQ-like domain PF364_02625 PF01926 50S ribosome-binding GTPase PF364_02625 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PF364_02635 PF02556 Preprotein translocase subunit SecB PF364_02640 PF00462 Glutaredoxin PF364_02650 PF03193 RsgA GTPase PF364_02655 PF00929 Exonuclease PF364_02670 PF02321 Outer membrane efflux protein PF364_02675 PF00005 ABC transporter PF364_02675 PF02687 FtsX-like permease family PF364_02675 PF12704 MacB-like periplasmic core domain PF364_02680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF364_02695 PF08264 Anticodon-binding domain of tRNA PF364_02695 PF00133 tRNA synthetases class I (I, L, M and V) PF364_02695 PF13603 Leucyl-tRNA synthetase, Domain 2 PF364_02695 PF09334 tRNA synthetases class I (M) PF364_02705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PF364_02705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PF364_02705 PF00205 Thiamine pyrophosphate enzyme, central domain PF364_02710 PF10369 Small subunit of acetolactate synthase PF364_02715 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PF364_02715 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PF364_02720 PF00990 Diguanylate cyclase, GGDEF domain PF364_02720 PF00563 EAL domain PF364_02720 PF03707 Bacterial signalling protein N terminal repeat PF364_02740 PF16658 Class II release factor RF3, C-terminal domain PF364_02740 PF00009 Elongation factor Tu GTP binding domain PF364_02740 PF03144 Elongation factor Tu domain 2 PF364_02755 PF01026 TatD related DNase PF364_02760 PF00330 Aconitase family (aconitate hydratase) PF364_02760 PF00694 Aconitase C-terminal domain PF364_02765 PF00899 ThiF family PF364_02775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_02775 PF03466 LysR substrate binding domain PF364_02785 PF01207 Dihydrouridine synthase (Dus) PF364_02790 PF00589 Phage integrase family PF364_02855 PF02322 Cytochrome bd terminal oxidase subunit II PF364_02860 PF01654 Cytochrome bd terminal oxidase subunit I PF364_02875 PF00593 TonB dependent receptor PF364_02875 PF07715 TonB-dependent Receptor Plug Domain PF364_02880 PF07715 TonB-dependent Receptor Plug Domain PF364_02880 PF00593 TonB dependent receptor PF364_02915 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PF364_02915 PF04717 Type VI secretion system, phage-baseplate injector PF364_02915 PF13296 Putative type VI secretion system Rhs element Vgr PF364_02930 PF02601 Exonuclease VII, large subunit PF364_02930 PF13742 OB-fold nucleic acid binding domain PF364_02945 PF17862 AAA+ lid domain PF364_02945 PF06480 FtsH Extracellular PF364_02945 PF01434 Peptidase family M41 PF364_02945 PF00004 ATPase family associated with various cellular activities (AAA) PF364_02955 PF07690 Major Facilitator Superfamily PF364_02965 PF00892 EamA-like transporter family PF364_02970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PF364_02970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PF364_02975 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PF364_02980 PF02233 NAD(P) transhydrogenase beta subunit PF364_02985 PF00106 short chain dehydrogenase PF364_03000 PF01261 Xylose isomerase-like TIM barrel PF364_03005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PF364_03005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PF364_03010 PF00378 Enoyl-CoA hydratase/isomerase PF364_03015 PF00672 HAMP domain PF364_03015 PF00512 His Kinase A (phospho-acceptor) domain PF364_03015 PF01627 Hpt domain PF364_03015 PF00072 Response regulator receiver domain PF364_03015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PF364_03015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_03020 PF00291 Pyridoxal-phosphate dependent enzyme PF364_03030 PF05958 tRNA (Uracil-5-)-methyltransferase PF364_03035 PF13291 ACT domain PF364_03035 PF04607 Region found in RelA / SpoT proteins PF364_03035 PF02824 TGS domain PF364_03045 PF03819 MazG nucleotide pyrophosphohydrolase domain PF364_03055 PF01743 Poly A polymerase head domain PF364_03055 PF12626 Polymerase A arginine-rich C-terminus PF364_03055 PF12627 Probable RNA and SrmB- binding site of polymerase A PF364_03060 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PF364_03065 PF02548 Ketopantoate hydroxymethyltransferase PF364_03070 PF02569 Pantoate-beta-alanine ligase PF364_03075 PF03668 P-loop ATPase protein family PF364_03080 PF00381 PTS HPr component phosphorylation site PF364_03085 PF04751 Protein of unknown function (DUF615) PF364_03090 PF00501 AMP-binding enzyme PF364_03090 PF13193 AMP-binding enzyme C-terminal domain PF364_03095 PF03129 Anticodon binding domain PF364_03095 PF02824 TGS domain PF364_03095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PF364_03095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PF364_03100 PF05198 Translation initiation factor IF-3, N-terminal domain PF364_03100 PF00707 Translation initiation factor IF-3, C-terminal domain PF364_03105 PF00043 Glutathione S-transferase, C-terminal domain PF364_03105 PF02798 Glutathione S-transferase, N-terminal domain PF364_03110 PF09335 SNARE associated Golgi protein PF364_03115 PF07690 Major Facilitator Superfamily PF364_03125 PF01632 Ribosomal protein L35 PF364_03130 PF00453 Ribosomal protein L20 PF364_03150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PF364_03150 PF01409 tRNA synthetases class II core domain (F) PF364_03155 PF03483 B3/4 domain PF364_03155 PF03484 tRNA synthetase B5 domain PF364_03155 PF03147 Ferredoxin-fold anticodon binding domain PF364_03155 PF01588 Putative tRNA binding domain PF364_03155 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PF364_03160 PF00216 Bacterial DNA-binding protein PF364_03175 PF07498 Rho termination factor, N-terminal domain PF364_03175 PF07497 Rho termination factor, RNA-binding domain PF364_03175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PF364_03180 PF00085 Thioredoxin PF364_03185 PF02541 Ppx/GppA phosphatase family PF364_03190 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PF364_03195 PF01171 PP-loop family PF364_03195 PF09179 TilS substrate binding domain PF364_03195 PF11734 TilS substrate C-terminal domain PF364_03200 PF03807 NADP oxidoreductase coenzyme F420-dependent PF364_03200 PF14748 Pyrroline-5-carboxylate reductase dimerisation PF364_03205 PF02325 YGGT family PF364_03210 PF01367 5'-3' exonuclease, C-terminal SAM fold PF364_03210 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PF364_03210 PF00476 DNA polymerase family A PF364_03210 PF01612 3'-5' exonuclease PF364_03230 PF00437 Type II/IV secretion system protein PF364_03235 PF02566 OsmC-like protein PF364_03240 PF01047 MarR family PF364_03250 PF00795 Carbon-nitrogen hydrolase PF364_03295 PF04963 Sigma-54 factor, core binding domain PF364_03295 PF04552 Sigma-54, DNA binding domain PF364_03295 PF00309 Sigma-54 factor, Activator interacting domain (AID) PF364_03300 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PF364_03305 PF01722 BolA-like protein PF364_03310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PF364_03315 PF01634 ATP phosphoribosyltransferase PF364_03320 PF00815 Histidinol dehydrogenase PF364_03325 PF00155 Aminotransferase class I and II PF364_03330 PF04715 Anthranilate synthase component I, N terminal region PF364_03330 PF00425 chorismate binding enzyme PF364_03380 PF00293 NUDIX domain PF364_03385 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_03390 PF00814 Glycoprotease family PF364_03395 PF04445 Putative SAM-dependent methyltransferase PF364_03405 PF00756 Putative esterase PF364_03415 PF00834 Ribulose-phosphate 3 epimerase family PF364_03430 PF00394 Multicopper oxidase PF364_03430 PF07731 Multicopper oxidase PF364_03430 PF07732 Multicopper oxidase PF364_03445 PF00893 Small Multidrug Resistance protein PF364_03450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PF364_03450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PF364_03455 PF01960 ArgJ family PF364_03460 PF02445 Quinolinate synthetase A protein PF364_03485 PF00962 Adenosine/AMP deaminase PF364_03490 PF08240 Alcohol dehydrogenase GroES-like domain PF364_03490 PF00107 Zinc-binding dehydrogenase PF364_03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_03495 PF03466 LysR substrate binding domain PF364_03500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_03500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_03500 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_03505 PF07690 Major Facilitator Superfamily PF364_03510 PF02515 CoA-transferase family III PF364_03520 PF00890 FAD binding domain PF364_03520 PF14537 Cytochrome c3 PF364_03525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_03525 PF03466 LysR substrate binding domain PF364_03535 PF07690 Major Facilitator Superfamily PF364_03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_03540 PF03466 LysR substrate binding domain PF364_03545 PF01810 LysE type translocator PF364_03550 PF03466 LysR substrate binding domain PF364_03550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_03560 PF01717 Cobalamin-independent synthase, Catalytic domain PF364_03560 PF08267 Cobalamin-independent synthase, N-terminal domain PF364_03565 PF01613 Flavin reductase like domain PF364_03610 PF02567 Phenazine biosynthesis-like protein PF364_03625 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system PF364_03640 PF00083 Sugar (and other) transporter PF364_03650 PF00293 NUDIX domain PF364_03650 PF09297 NADH pyrophosphatase zinc ribbon domain PF364_03655 PF00171 Aldehyde dehydrogenase family PF364_03660 PF00296 Luciferase-like monooxygenase PF364_03665 PF01613 Flavin reductase like domain PF364_03670 PF01557 Fumarylacetoacetate (FAA) hydrolase family PF364_03675 PF00892 EamA-like transporter family PF364_03680 PF00268 Ribonucleotide reductase, small chain PF364_03690 PF02867 Ribonucleotide reductase, barrel domain PF364_03690 PF00317 Ribonucleotide reductase, all-alpha domain PF364_03690 PF03477 ATP cone domain PF364_03700 PF00486 Transcriptional regulatory protein, C terminal PF364_03700 PF00072 Response regulator receiver domain PF364_03705 PF00672 HAMP domain PF364_03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_03705 PF00512 His Kinase A (phospho-acceptor) domain PF364_03715 PF17151 Periplasmic sensor domain PF364_03715 PF00990 Diguanylate cyclase, GGDEF domain PF364_03720 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PF364_03725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PF364_03730 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PF364_03730 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PF364_03740 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PF364_03740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PF364_03740 PF10531 SLBB domain PF364_03745 PF00384 Molybdopterin oxidoreductase PF364_03745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PF364_03745 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PF364_03750 PF00146 NADH dehydrogenase PF364_03755 PF12838 4Fe-4S dicluster domain PF364_03760 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PF364_03765 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PF364_03770 PF00361 Proton-conducting membrane transporter PF364_03770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PF364_03775 PF00361 Proton-conducting membrane transporter PF364_03780 PF00361 Proton-conducting membrane transporter PF364_03790 PF00313 'Cold-shock' DNA-binding domain PF364_03800 PF03466 LysR substrate binding domain PF364_03800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_03805 PF00970 Oxidoreductase FAD-binding domain PF364_03805 PF00175 Oxidoreductase NAD-binding domain PF364_03820 PF05552 Conserved TM helix PF364_03835 PF00291 Pyridoxal-phosphate dependent enzyme PF364_03840 PF13533 Biotin-lipoyl like PF364_03865 PF01588 Putative tRNA binding domain PF364_03865 PF09334 tRNA synthetases class I (M) PF364_03875 PF10609 NUBPL iron-transfer P-loop NTPase PF364_03880 PF01048 Phosphorylase superfamily PF364_03895 PF00692 dUTPase PF364_03935 PF01207 Dihydrouridine synthase (Dus) PF364_03945 PF02978 Signal peptide binding domain PF364_03945 PF02881 SRP54-type protein, helical bundle domain PF364_03945 PF00448 SRP54-type protein, GTPase domain PF364_03950 PF03309 Type III pantothenate kinase PF364_03960 PF01925 Sulfite exporter TauE/SafE PF364_03970 PF02463 RecF/RecN/SMC N terminal domain PF364_03970 PF06470 SMC proteins Flexible Hinge Domain PF364_03980 PF12826 Helix-hairpin-helix motif PF364_03980 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PF364_03980 PF03120 NAD-dependent DNA ligase OB-fold domain PF364_03980 PF01653 NAD-dependent DNA ligase adenylation domain PF364_03980 PF00533 BRCA1 C Terminus (BRCT) domain PF364_03985 PF00210 Ferritin-like domain PF364_03990 PF07690 Major Facilitator Superfamily PF364_03995 PF00982 Glycosyltransferase family 20 PF364_04000 PF02358 Trehalose-phosphatase PF364_04005 PF08241 Methyltransferase domain PF364_04005 PF12697 Alpha/beta hydrolase family PF364_04010 PF00202 Aminotransferase class-III PF364_04010 PF04055 Radical SAM superfamily PF364_04010 PF06968 Biotin and Thiamin Synthesis associated domain PF364_04015 PF00155 Aminotransferase class I and II PF364_04030 PF01479 S4 domain PF364_04030 PF00849 RNA pseudouridylate synthase PF364_04035 PF04079 Segregation and condensation complex subunit ScpB PF364_04040 PF02616 Segregation and condensation protein ScpA PF364_04045 PF01300 Telomere recombination PF364_04050 PF04315 Elongation factor P hydroxylase PF364_04055 PF02620 Large ribosomal RNA subunit accumulation protein YceD PF364_04060 PF01783 Ribosomal L32p protein family PF364_04065 PF00698 Acyl transferase domain PF364_04075 PF00550 Phosphopantetheine attachment site PF364_04080 PF04972 BON domain PF364_04080 PF01476 LysM domain PF364_04085 PF02581 Thiamine monophosphate synthase PF364_04085 PF03070 TENA/THI-4/PQQC family PF364_04085 PF08543 Phosphomethylpyrimidine kinase PF364_04095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PF364_04110 PF02261 Aspartate decarboxylase PF364_04115 PF01195 Peptidyl-tRNA hydrolase PF364_04120 PF01386 Ribosomal L25p family PF364_04125 PF14572 Phosphoribosyl synthetase-associated domain PF364_04125 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PF364_04150 PF00288 GHMP kinases N terminal domain PF364_04150 PF08544 GHMP kinases C terminal PF364_04155 PF03550 Outer membrane lipoprotein LolB PF364_04165 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PF364_04165 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PF364_04165 PF01488 Shikimate / quinate 5-dehydrogenase PF364_04170 PF10410 DnaB-helicase binding domain of primase PF364_04170 PF01807 CHC2 zinc finger PF364_04170 PF08275 DNA primase catalytic core, N-terminal domain PF364_04170 PF08278 DNA primase DnaG DnaB-binding PF364_04175 PF13525 Outer membrane lipoprotein PF364_04180 PF00849 RNA pseudouridylate synthase PF364_04180 PF01479 S4 domain PF364_04185 PF02578 Multi-copper polyphenol oxidoreductase laccase PF364_04190 PF03358 NADPH-dependent FMN reductase PF364_04195 PF01668 SmpB protein PF364_04200 PF01467 Cytidylyltransferase-like PF364_04205 PF00037 4Fe-4S binding domain PF364_04225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_04225 PF03466 LysR substrate binding domain PF364_04230 PF00180 Isocitrate/isopropylmalate dehydrogenase PF364_04235 PF02028 BCCT, betaine/carnitine/choline family transporter PF364_04240 PF07859 alpha/beta hydrolase fold PF364_04245 PF00355 Rieske [2Fe-2S] domain PF364_04245 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF364_04250 PF00171 Aldehyde dehydrogenase family PF364_04255 PF00175 Oxidoreductase NAD-binding domain PF364_04255 PF00970 Oxidoreductase FAD-binding domain PF364_04255 PF00111 2Fe-2S iron-sulfur cluster binding domain PF364_04270 PF00795 Carbon-nitrogen hydrolase PF364_04270 PF02540 NAD synthase PF364_04280 PF05726 Pirin C-terminal cupin domain PF364_04280 PF02678 Pirin PF364_04285 PF03653 Uncharacterised protein family (UPF0093) PF364_04290 PF00109 Beta-ketoacyl synthase, N-terminal domain PF364_04290 PF02801 Beta-ketoacyl synthase, C-terminal domain PF364_04300 PF00164 Ribosomal protein S12/S23 PF364_04305 PF00177 Ribosomal protein S7p/S5e PF364_04310 PF00679 Elongation factor G C-terminus PF364_04310 PF14492 Elongation Factor G, domain II PF364_04310 PF03764 Elongation factor G, domain IV PF364_04310 PF00009 Elongation factor Tu GTP binding domain PF364_04310 PF03144 Elongation factor Tu domain 2 PF364_04315 PF03144 Elongation factor Tu domain 2 PF364_04315 PF03143 Elongation factor Tu C-terminal domain PF364_04315 PF00009 Elongation factor Tu GTP binding domain PF364_04330 PF00583 Acetyltransferase (GNAT) family PF364_04335 PF04376 Arginine-tRNA-protein transferase, N terminus PF364_04335 PF04377 Arginine-tRNA-protein transferase, C terminus PF364_04340 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PF364_04345 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_04350 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PF364_04350 PF17854 FtsK alpha domain PF364_04350 PF09397 Ftsk gamma domain PF364_04350 PF01580 FtsK/SpoIIIE family PF364_04355 PF01810 LysE type translocator PF364_04365 PF03776 Septum formation topological specificity factor MinE PF364_04370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PF364_04375 PF03775 Septum formation inhibitor MinC, C-terminal domain PF364_04385 PF01553 Acyltransferase PF364_04390 PF13488 Glycine zipper PF364_04390 PF00691 OmpA family PF364_04395 PF00580 UvrD/REP helicase N-terminal domain PF364_04395 PF13361 UvrD-like helicase C-terminal domain PF364_04400 PF00692 dUTPase PF364_04405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PF364_04405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF364_04405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF364_04405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF364_04410 PF00696 Amino acid kinase family PF364_04420 PF13230 Glutamine amidotransferases class-II PF364_04425 PF01814 Hemerythrin HHE cation binding domain PF364_04435 PF03658 RnfH family Ubiquitin PF364_04440 PF04355 SmpA / OmlA family PF364_04445 PF01475 Ferric uptake regulator family PF364_04450 PF00437 Type II/IV secretion system protein PF364_04455 PF00437 Type II/IV secretion system protein PF364_04460 PF01168 Alanine racemase, N-terminal domain PF364_04470 PF00149 Calcineurin-like phosphoesterase PF364_04470 PF12320 Type 5 capsule protein repressor C-terminal domain PF364_04490 PF08338 Domain of unknown function (DUF1731) PF364_04490 PF01370 NAD dependent epimerase/dehydratase family PF364_04495 PF01266 FAD dependent oxidoreductase PF364_04500 PF00490 Delta-aminolevulinic acid dehydratase PF364_04505 PF03061 Thioesterase superfamily PF364_04510 PF13533 Biotin-lipoyl like PF364_04515 PF07690 Major Facilitator Superfamily PF364_04590 PF00929 Exonuclease PF364_04625 PF01381 Helix-turn-helix PF364_04625 PF00717 Peptidase S24-like PF364_04670 PF00145 C-5 cytosine-specific DNA methylase PF364_04680 PF01695 IstB-like ATP binding protein PF364_04885 PF05016 ParE toxin of type II toxin-antitoxin system, parDE PF364_04925 PF02768 DNA polymerase III beta subunit, C-terminal domain PF364_04925 PF00712 DNA polymerase III beta subunit, N-terminal domain PF364_04925 PF02767 DNA polymerase III beta subunit, central domain PF364_05025 PF13356 Arm DNA-binding domain PF364_05025 PF00589 Phage integrase family PF364_05070 PF00436 Single-strand binding protein family PF364_05120 PF12161 HsdM N-terminal domain PF364_05120 PF02384 N-6 DNA Methylase PF364_05130 PF08463 EcoEI R protein C-terminal PF364_05130 PF00271 Helicase conserved C-terminal domain PF364_05130 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PF364_05130 PF04851 Type III restriction enzyme, res subunit PF364_05140 PF00083 Sugar (and other) transporter PF364_05145 PF00701 Dihydrodipicolinate synthetase family PF364_05155 PF04542 Sigma-70 region 2 PF364_05155 PF08281 Sigma-70, region 4 PF364_05165 PF07715 TonB-dependent Receptor Plug Domain PF364_05165 PF00593 TonB dependent receptor PF364_05175 PF04575 Protein of unknown function (DUF560) PF364_05185 PF01126 Heme oxygenase PF364_05210 PF13520 Amino acid permease PF364_05215 PF02574 Homocysteine S-methyltransferase PF364_05225 PF06039 Malate:quinone oxidoreductase (Mqo) PF364_05230 PF05199 GMC oxidoreductase PF364_05230 PF00732 GMC oxidoreductase PF364_05235 PF00171 Aldehyde dehydrogenase family PF364_05240 PF00440 Bacterial regulatory proteins, tetR family PF364_05240 PF13977 BetI-type transcriptional repressor, C-terminal PF364_05245 PF02028 BCCT, betaine/carnitine/choline family transporter PF364_05250 PF02028 BCCT, betaine/carnitine/choline family transporter PF364_05260 PF03061 Thioesterase superfamily PF364_05270 PF02492 CobW/HypB/UreG, nucleotide-binding domain PF364_05270 PF07683 Cobalamin synthesis protein cobW C-terminal domain PF364_05275 PF00375 Sodium:dicarboxylate symporter family PF364_05280 PF07152 YaeQ protein PF364_05285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF364_05290 PF14883 Hypothetical glycosyl hydrolase family 13 PF364_05290 PF01522 Polysaccharide deacetylase PF364_05295 PF00535 Glycosyl transferase family 2 PF364_05305 PF00378 Enoyl-CoA hydratase/isomerase PF364_05320 PF09339 IclR helix-turn-helix domain PF364_05320 PF01614 Bacterial transcriptional regulator PF364_05325 PF00355 Rieske [2Fe-2S] domain PF364_05335 PF00355 Rieske [2Fe-2S] domain PF364_05345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF364_05350 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_05350 PF14759 Reductase C-terminal PF364_05355 PF07690 Major Facilitator Superfamily PF364_05365 PF12697 Alpha/beta hydrolase family PF364_05375 PF01958 Domain of unknown function DUF108 PF364_05375 PF03447 Homoserine dehydrogenase, NAD binding domain PF364_05380 PF00171 Aldehyde dehydrogenase family PF364_05385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PF364_05385 PF00205 Thiamine pyrophosphate enzyme, central domain PF364_05385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PF364_05395 PF07690 Major Facilitator Superfamily PF364_05400 PF01327 Polypeptide deformylase PF364_05405 PF04960 Glutaminase PF364_05410 PF02311 AraC-like ligand binding domain PF364_05410 PF12833 Helix-turn-helix domain PF364_05415 PF07690 Major Facilitator Superfamily PF364_05420 PF01263 Aldose 1-epimerase PF364_05430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_05430 PF03466 LysR substrate binding domain PF364_05440 PF07690 Major Facilitator Superfamily PF364_05445 PF00456 Transketolase, thiamine diphosphate binding domain PF364_05450 PF02779 Transketolase, pyrimidine binding domain PF364_05450 PF02780 Transketolase, C-terminal domain PF364_05455 PF02965 Vitamin B12 dependent methionine synthase, activation domain PF364_05455 PF02310 B12 binding domain PF364_05455 PF02607 B12 binding domain PF364_05455 PF02574 Homocysteine S-methyltransferase PF364_05455 PF00809 Pterin binding enzyme PF364_05460 PF01384 Phosphate transporter family PF364_05465 PF00291 Pyridoxal-phosphate dependent enzyme PF364_05480 PF03781 Sulfatase-modifying factor enzyme 1 PF364_05485 PF00884 Sulfatase PF364_05495 PF01106 NifU-like domain PF364_05495 PF01521 Iron-sulphur cluster biosynthesis PF364_05500 PF00593 TonB dependent receptor PF364_05500 PF07715 TonB-dependent Receptor Plug Domain PF364_05510 PF00561 alpha/beta hydrolase fold PF364_05515 PF00484 Carbonic anhydrase PF364_05520 PF13472 GDSL-like Lipase/Acylhydrolase family PF364_05525 PF00005 ABC transporter PF364_05535 PF01694 Rhomboid family PF364_05540 PF00912 Transglycosylase PF364_05545 PF02503 Polyphosphate kinase middle domain PF364_05545 PF13090 Polyphosphate kinase C-terminal domain 2 PF364_05545 PF13089 Polyphosphate kinase N-terminal domain PF364_05545 PF17941 Polyphosphate kinase C-terminal domain 1 PF364_05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_05560 PF03466 LysR substrate binding domain PF364_05565 PF00561 alpha/beta hydrolase fold PF364_05570 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_05570 PF18113 Rubredoxin binding C-terminal domain PF364_05575 PF00301 Rubredoxin PF364_05590 PF00152 tRNA synthetases class II (D, K and N) PF364_05590 PF01336 OB-fold nucleic acid binding domain PF364_05595 PF14052 Capsule assembly protein Wzi PF364_05605 PF01507 Phosphoadenosine phosphosulfate reductase family PF364_05610 PF00009 Elongation factor Tu GTP binding domain PF364_05625 PF03600 Citrate transporter PF364_05630 PF03471 Transporter associated domain PF364_05630 PF00571 CBS domain PF364_05630 PF01595 Cyclin M transmembrane N-terminal domain PF364_05635 PF03466 LysR substrate binding domain PF364_05635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_05640 PF00463 Isocitrate lyase family PF364_05655 PF01774 UreD urease accessory protein PF364_05660 PF00547 Urease, gamma subunit PF364_05665 PF00699 Urease beta subunit PF364_05670 PF00449 Urease alpha-subunit, N-terminal domain PF364_05670 PF01979 Amidohydrolase family PF364_05675 PF05194 UreE urease accessory protein, C-terminal domain PF364_05675 PF02814 UreE urease accessory protein, N-terminal domain PF364_05680 PF01730 UreF PF364_05685 PF02492 CobW/HypB/UreG, nucleotide-binding domain PF364_05700 PF00905 Penicillin binding protein transpeptidase domain PF364_05700 PF03717 Penicillin-binding Protein dimerisation domain PF364_05715 PF05191 Adenylate kinase, active site lid PF364_05725 PF10576 Iron-sulfur binding domain of endonuclease III PF364_05725 PF00633 Helix-hairpin-helix motif PF364_05725 PF00730 HhH-GPD superfamily base excision DNA repair protein PF364_05730 PF04060 Putative Fe-S cluster PF364_05735 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PF364_05735 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PF364_05745 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PF364_05750 PF02590 Predicted SPOUT methyltransferase PF364_05755 PF00004 ATPase family associated with various cellular activities (AAA) PF364_05755 PF05362 Lon protease (S16) C-terminal proteolytic domain PF364_05755 PF02190 ATP-dependent protease La (LON) substrate-binding domain PF364_05765 PF01812 5-formyltetrahydrofolate cyclo-ligase family PF364_05805 PF05195 Aminopeptidase P, N-terminal domain PF364_05805 PF00557 Metallopeptidase family M24 PF364_05810 PF01494 FAD binding domain PF364_05815 PF01494 FAD binding domain PF364_05825 PF13411 MerR HTH family regulatory protein PF364_05835 PF01810 LysE type translocator PF364_05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_05840 PF03466 LysR substrate binding domain PF364_05850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PF364_05855 PF02021 Uncharacterised protein family UPF0102 PF364_05860 PF04972 BON domain PF364_05870 PF00293 NUDIX domain PF364_05870 PF09297 NADH pyrophosphatase zinc ribbon domain PF364_05880 PF00929 Exonuclease PF364_05885 PF01464 Transglycosylase SLT domain PF364_05885 PF01476 LysM domain PF364_05885 PF01464 Transglycosylase SLT domain PF364_05885 PF01476 LysM domain PF364_05890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PF364_05895 PF00528 Binding-protein-dependent transport system inner membrane component PF364_05900 PF00528 Binding-protein-dependent transport system inner membrane component PF364_05900 PF12911 N-terminal TM domain of oligopeptide transport permease C PF364_05905 PF00005 ABC transporter PF364_05905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PF364_05910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF364_05910 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_05920 PF00593 TonB dependent receptor PF364_05920 PF07715 TonB-dependent Receptor Plug Domain PF364_05930 PF00929 Exonuclease PF364_05935 PF01979 Amidohydrolase family PF364_05940 PF00563 EAL domain PF364_05940 PF01590 GAF domain PF364_05940 PF00990 Diguanylate cyclase, GGDEF domain PF364_05940 PF00360 Phytochrome region PF364_05945 PF00764 Arginosuccinate synthase PF364_05950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF364_05950 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_05965 PF05987 Bacterial protein of unknown function (DUF898) PF364_05970 PF03180 NLPA lipoprotein PF364_05980 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PF364_05980 PF04717 Type VI secretion system, phage-baseplate injector PF364_05980 PF13296 Putative type VI secretion system Rhs element Vgr PF364_05985 PF03527 RHS protein PF364_05985 PF05593 RHS Repeat PF364_06025 PF00324 Amino acid permease PF364_06030 PF01266 FAD dependent oxidoreductase PF364_06035 PF00324 Amino acid permease PF364_06045 PF07729 FCD domain PF364_06045 PF00392 Bacterial regulatory proteins, gntR family PF364_06055 PF00171 Aldehyde dehydrogenase family PF364_06065 PF00202 Aminotransferase class-III PF364_06070 PF04958 Arginine N-succinyltransferase beta subunit PF364_06075 PF00324 Amino acid permease PF364_06100 PF00171 Aldehyde dehydrogenase family PF364_06120 PF00892 EamA-like transporter family PF364_06125 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PF364_06125 PF08666 SAF domain PF364_06130 PF07690 Major Facilitator Superfamily PF364_06135 PF13378 Enolase C-terminal domain-like PF364_06140 PF00701 Dihydrodipicolinate synthetase family PF364_06145 PF00171 Aldehyde dehydrogenase family PF364_06150 PF07729 FCD domain PF364_06150 PF00392 Bacterial regulatory proteins, gntR family PF364_06155 PF07519 Tannase and feruloyl esterase PF364_06170 PF03573 outer membrane porin, OprD family PF364_06175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_06175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_06175 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_06185 PF00171 Aldehyde dehydrogenase family PF364_06190 PF00378 Enoyl-CoA hydratase/isomerase PF364_06195 PF07690 Major Facilitator Superfamily PF364_06215 PF00175 Oxidoreductase NAD-binding domain PF364_06215 PF00111 2Fe-2S iron-sulfur cluster binding domain PF364_06220 PF00355 Rieske [2Fe-2S] domain PF364_06225 PF07690 Major Facilitator Superfamily PF364_06230 PF03573 outer membrane porin, OprD family PF364_06235 PF05199 GMC oxidoreductase PF364_06240 PF07859 alpha/beta hydrolase fold PF364_06245 PF00106 short chain dehydrogenase PF364_06250 PF00743 Flavin-binding monooxygenase-like PF364_06255 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF364_06255 PF12833 Helix-turn-helix domain PF364_06265 PF00743 Flavin-binding monooxygenase-like PF364_06270 PF00106 short chain dehydrogenase PF364_06280 PF17932 Tetracyclin repressor-like, C-terminal domain PF364_06280 PF00440 Bacterial regulatory proteins, tetR family PF364_06285 PF17954 Quercetinase C-terminal cupin domain PF364_06285 PF02678 Pirin PF364_06300 PF00106 short chain dehydrogenase PF364_06305 PF00743 Flavin-binding monooxygenase-like PF364_06315 PF00860 Permease family PF364_06320 PF00962 Adenosine/AMP deaminase PF364_06325 PF01292 Prokaryotic cytochrome b561 PF364_06345 PF01351 Ribonuclease HII PF364_06350 PF02599 Global regulator protein family PF364_06355 PF13840 ACT domain PF364_06355 PF01842 ACT domain PF364_06355 PF00696 Amino acid kinase family PF364_06360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PF364_06360 PF01411 tRNA synthetases class II (A) PF364_06360 PF02272 DHHA1 domain PF364_06365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PF364_06365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PF364_06375 PF13393 Histidyl-tRNA synthetase PF364_06380 PF00709 Adenylosuccinate synthetase PF364_06395 PF00248 Aldo/keto reductase family PF364_06400 PF13545 Crp-like helix-turn-helix domain PF364_06400 PF00027 Cyclic nucleotide-binding domain PF364_06410 PF02566 OsmC-like protein PF364_06425 PF10431 C-terminal, D2-small domain, of ClpB protein PF364_06425 PF02861 Clp amino terminal domain, pathogenicity island component PF364_06425 PF17871 AAA lid domain PF364_06425 PF07724 AAA domain (Cdc48 subfamily) PF364_06425 PF00004 ATPase family associated with various cellular activities (AAA) PF364_06440 PF02926 THUMP domain PF364_06440 PF01170 Putative RNA methylase family UPF0020 PF364_06440 PF10672 S-adenosylmethionine-dependent methyltransferase PF364_06450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PF364_06450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PF364_06455 PF01979 Amidohydrolase family PF364_06460 PF00691 OmpA family PF364_06460 PF13488 Glycine zipper PF364_06470 PF00043 Glutathione S-transferase, C-terminal domain PF364_06470 PF13417 Glutathione S-transferase, N-terminal domain PF364_06630 PF02390 Putative methyltransferase PF364_06640 PF00043 Glutathione S-transferase, C-terminal domain PF364_06640 PF02798 Glutathione S-transferase, N-terminal domain PF364_06650 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_06650 PF13192 Thioredoxin domain PF364_06670 PF10417 C-terminal domain of 1-Cys peroxiredoxin PF364_06670 PF00578 AhpC/TSA family PF364_06675 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PF364_06675 PF04408 Helicase associated domain (HA2) PF364_06675 PF00271 Helicase conserved C-terminal domain PF364_06675 PF00270 DEAD/DEAH box helicase PF364_06675 PF11898 Domain of unknown function (DUF3418) PF364_06680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PF364_06680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PF364_06690 PF07690 Major Facilitator Superfamily PF364_06695 PF03594 Benzoate membrane transport protein PF364_06700 PF00106 short chain dehydrogenase PF364_06705 PF00111 2Fe-2S iron-sulfur cluster binding domain PF364_06705 PF00970 Oxidoreductase FAD-binding domain PF364_06705 PF00175 Oxidoreductase NAD-binding domain PF364_06715 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF364_06715 PF00355 Rieske [2Fe-2S] domain PF364_06725 PF03466 LysR substrate binding domain PF364_06725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_06735 PF00403 Heavy-metal-associated domain PF364_06740 PF00376 MerR family regulatory protein PF364_06740 PF09278 MerR, DNA binding PF364_06775 PF02601 Exonuclease VII, large subunit PF364_06775 PF13742 OB-fold nucleic acid binding domain PF364_06805 PF01810 LysE type translocator PF364_06810 PF00313 'Cold-shock' DNA-binding domain PF364_06820 PF14748 Pyrroline-5-carboxylate reductase dimerisation PF364_06820 PF03807 NADP oxidoreductase coenzyme F420-dependent PF364_06845 PF07690 Major Facilitator Superfamily PF364_06850 PF01638 HxlR-like helix-turn-helix PF364_06880 PF09190 DALR domain PF364_06880 PF01406 tRNA synthetases class I (C) catalytic domain PF364_06885 PF00571 CBS domain PF364_06885 PF01380 SIS domain PF364_06900 PF03968 OstA-like protein PF364_06905 PF00005 ABC transporter PF364_06905 PF12399 Branched-chain amino acid ATP-binding cassette transporter PF364_06910 PF02321 Outer membrane efflux protein PF364_06915 PF00664 ABC transporter transmembrane region PF364_06915 PF00005 ABC transporter PF364_06915 PF03412 Peptidase C39 family PF364_06925 PF01205 Uncharacterized protein family UPF0029 PF364_06930 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_06940 PF01596 O-methyltransferase PF364_06950 PF00037 4Fe-4S binding domain PF364_06950 PF11953 Domain of unknown function (DUF3470) PF364_06960 PF01624 MutS domain I PF364_06960 PF00488 MutS domain V PF364_06960 PF05190 MutS family domain IV PF364_06960 PF05192 MutS domain III PF364_06960 PF05188 MutS domain II PF364_06965 PF01037 Lrp/AsnC ligand binding domain PF364_06970 PF00892 EamA-like transporter family PF364_06975 PF03707 Bacterial signalling protein N terminal repeat PF364_06975 PF00990 Diguanylate cyclase, GGDEF domain PF364_06975 PF00563 EAL domain PF364_06980 PF03279 Bacterial lipid A biosynthesis acyltransferase PF364_06990 PF01544 CorA-like Mg2+ transporter protein PF364_07010 PF07690 Major Facilitator Superfamily PF364_07015 PF01177 Asp/Glu/Hydantoin racemase PF364_07020 PF00291 Pyridoxal-phosphate dependent enzyme PF364_07025 PF00005 ABC transporter PF364_07030 PF00528 Binding-protein-dependent transport system inner membrane component PF364_07055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF364_07055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF364_07080 PF13296 Putative type VI secretion system Rhs element Vgr PF364_07080 PF04717 Type VI secretion system, phage-baseplate injector PF364_07080 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PF364_07085 PF03527 RHS protein PF364_07085 PF05593 RHS Repeat PF364_07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_07115 PF01566 Natural resistance-associated macrophage protein PF364_07120 PF03746 LamB/YcsF family PF364_07125 PF07286 Protein of unknown function (DUF1445) PF364_07135 PF00289 Biotin carboxylase, N-terminal domain PF364_07135 PF02785 Biotin carboxylase C-terminal domain PF364_07135 PF00364 Biotin-requiring enzyme PF364_07135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF364_07140 PF00654 Voltage gated chloride channel PF364_07180 PF00440 Bacterial regulatory proteins, tetR family PF364_07190 PF13823 Alcohol dehydrogenase GroES-associated PF364_07190 PF08240 Alcohol dehydrogenase GroES-like domain PF364_07190 PF00107 Zinc-binding dehydrogenase PF364_07205 PF00289 Biotin carboxylase, N-terminal domain PF364_07205 PF02785 Biotin carboxylase C-terminal domain PF364_07205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF364_07210 PF02525 Flavodoxin-like fold PF364_07215 PF01638 HxlR-like helix-turn-helix PF364_07225 PF01402 Ribbon-helix-helix protein, copG family PF364_07225 PF08753 NikR C terminal nickel binding domain PF364_07230 PF01425 Amidase PF364_07235 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF364_07240 PF00005 ABC transporter PF364_07270 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath PF364_07285 PF05947 Type VI secretion system, TssF PF364_07300 PF06744 Type VI secretion protein IcmF C-terminal PF364_07300 PF14331 ImcF-related N-terminal domain PF364_07300 PF06761 Intracellular multiplication and human macrophage-killing PF364_07310 PF01389 OmpA-like transmembrane domain PF364_07310 PF00691 OmpA family PF364_07320 PF17871 AAA lid domain PF364_07320 PF10431 C-terminal, D2-small domain, of ClpB protein PF364_07320 PF00004 ATPase family associated with various cellular activities (AAA) PF364_07320 PF07724 AAA domain (Cdc48 subfamily) PF364_07325 PF06812 ImpA, N-terminal, type VI secretion system PF364_07330 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE PF364_07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_07350 PF03466 LysR substrate binding domain PF364_07360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PF364_07365 PF07690 Major Facilitator Superfamily PF364_07380 PF02677 Epoxyqueuosine reductase QueH PF364_07390 PF00376 MerR family regulatory protein PF364_07390 PF09278 MerR, DNA binding PF364_07400 PF00701 Dihydrodipicolinate synthetase family PF364_07410 PF00392 Bacterial regulatory proteins, gntR family PF364_07415 PF05544 Proline racemase PF364_07420 PF01266 FAD dependent oxidoreductase PF364_07430 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_07430 PF04324 BFD-like [2Fe-2S] binding domain PF364_07440 PF00083 Sugar (and other) transporter PF364_07445 PF00171 Aldehyde dehydrogenase family PF364_07450 PF13520 Amino acid permease PF364_07455 PF03315 Serine dehydratase beta chain PF364_07455 PF03313 Serine dehydratase alpha chain PF364_07460 PF01575 MaoC like domain PF364_07460 PF00171 Aldehyde dehydrogenase family PF364_07465 PF05138 Phenylacetic acid catabolic protein PF364_07470 PF06243 Phenylacetic acid degradation B PF364_07475 PF05138 Phenylacetic acid catabolic protein PF364_07480 PF01883 Iron-sulfur cluster assembly protein PF364_07485 PF00175 Oxidoreductase NAD-binding domain PF364_07485 PF00970 Oxidoreductase FAD-binding domain PF364_07485 PF00111 2Fe-2S iron-sulfur cluster binding domain PF364_07490 PF00378 Enoyl-CoA hydratase/isomerase PF364_07495 PF00378 Enoyl-CoA hydratase/isomerase PF364_07500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF364_07500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF364_07500 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain PF364_07505 PF02803 Thiolase, C-terminal domain PF364_07505 PF00108 Thiolase, N-terminal domain PF364_07510 PF14535 AMP-binding enzyme C-terminal domain PF364_07510 PF00501 AMP-binding enzyme PF364_07515 PF08223 PaaX-like protein C-terminal domain PF364_07515 PF07848 PaaX-like protein PF364_07520 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_07525 PF03061 Thioesterase superfamily PF364_07530 PF13086 AAA domain PF364_07530 PF13087 AAA domain PF364_07530 PF13195 Protein of unknown function (DUF4011) PF364_07530 PF13087 AAA domain PF364_07530 PF13195 Protein of unknown function (DUF4011) PF364_07530 PF13086 AAA domain PF364_07540 PF00300 Histidine phosphatase superfamily (branch 1) PF364_07560 PF00199 Catalase PF364_07565 PF01292 Prokaryotic cytochrome b561 PF364_07590 PF12697 Alpha/beta hydrolase family PF364_07595 PF01613 Flavin reductase like domain PF364_07600 PF00296 Luciferase-like monooxygenase PF364_07605 PF00171 Aldehyde dehydrogenase family PF364_07615 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PF364_07625 PF00171 Aldehyde dehydrogenase family PF364_07630 PF02627 Carboxymuconolactone decarboxylase family PF364_07635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_07635 PF03466 LysR substrate binding domain PF364_07640 PF02525 Flavodoxin-like fold PF364_07645 PF01614 Bacterial transcriptional regulator PF364_07645 PF09339 IclR helix-turn-helix domain PF364_07650 PF01494 FAD binding domain PF364_07655 PF01168 Alanine racemase, N-terminal domain PF364_07655 PF00842 Alanine racemase, C-terminal domain PF364_07660 PF07702 UTRA domain PF364_07660 PF00392 Bacterial regulatory proteins, gntR family PF364_07670 PF08402 TOBE domain PF364_07670 PF00005 ABC transporter PF364_07675 PF00528 Binding-protein-dependent transport system inner membrane component PF364_07680 PF01266 FAD dependent oxidoreductase PF364_07685 PF00266 Aminotransferase class-V PF364_07690 PF13419 Haloacid dehalogenase-like hydrolase PF364_07695 PF01810 LysE type translocator PF364_07710 PF03466 LysR substrate binding domain PF364_07710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_07715 PF00682 HMGL-like PF364_07720 PF02785 Biotin carboxylase C-terminal domain PF364_07720 PF18140 Propionyl-coenzyme A carboxylase BT domain PF364_07720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF364_07720 PF00289 Biotin carboxylase, N-terminal domain PF364_07720 PF00364 Biotin-requiring enzyme PF364_07725 PF00378 Enoyl-CoA hydratase/isomerase PF364_07730 PF01039 Carboxyl transferase domain PF364_07735 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_07735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_07735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_07740 PF00440 Bacterial regulatory proteins, tetR family PF364_07745 PF00501 AMP-binding enzyme PF364_07745 PF13193 AMP-binding enzyme C-terminal domain PF364_07765 PF03466 LysR substrate binding domain PF364_07765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_07800 PF00994 Probable molybdopterin binding domain PF364_07800 PF18146 Damage-inducible protein CinA KH domain PF364_07800 PF02464 Competence-damaged protein PF364_07810 PF00199 Catalase PF364_07810 PF06628 Catalase-related immune-responsive PF364_07810 PF18011 C-terminal domain found in long catalases PF364_07835 PF00717 Peptidase S24-like PF364_07845 PF13404 AsnC-type helix-turn-helix domain PF364_07845 PF01037 Lrp/AsnC ligand binding domain PF364_07855 PF00512 His Kinase A (phospho-acceptor) domain PF364_07855 PF09308 LuxQ, periplasmic PF364_07855 PF00072 Response regulator receiver domain PF364_07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_07860 PF00072 Response regulator receiver domain PF364_07875 PF00528 Binding-protein-dependent transport system inner membrane component PF364_07880 PF00528 Binding-protein-dependent transport system inner membrane component PF364_07885 PF00005 ABC transporter PF364_07890 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF364_07895 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF364_07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_07905 PF03466 LysR substrate binding domain PF364_07910 PF01810 LysE type translocator PF364_07920 PF00266 Aminotransferase class-V PF364_07930 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_07935 PF00581 Rhodanese-like domain PF364_07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_07945 PF03466 LysR substrate binding domain PF364_07950 PF02798 Glutathione S-transferase, N-terminal domain PF364_07955 PF02798 Glutathione S-transferase, N-terminal domain PF364_07955 PF14834 Glutathione S-transferase, C-terminal domain PF364_07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_07960 PF03466 LysR substrate binding domain PF364_07965 PF03788 LrgA family PF364_07970 PF04172 LrgB-like family PF364_07975 PF00155 Aminotransferase class I and II PF364_07975 PF00392 Bacterial regulatory proteins, gntR family PF364_07990 PF07690 Major Facilitator Superfamily PF364_08000 PF03466 LysR substrate binding domain PF364_08000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_08005 PF16957 Malonate decarboxylase, alpha subunit, transporter PF364_08010 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase PF364_08015 PF06857 Malonate decarboxylase delta subunit (MdcD) PF364_08020 PF01039 Carboxyl transferase domain PF364_08030 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG PF364_08035 PF00698 Acyl transferase domain PF364_08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_08055 PF03466 LysR substrate binding domain PF364_08060 PF00155 Aminotransferase class I and II PF364_08060 PF00392 Bacterial regulatory proteins, gntR family PF364_08070 PF02322 Cytochrome bd terminal oxidase subunit II PF364_08075 PF01654 Cytochrome bd terminal oxidase subunit I PF364_08090 PF00296 Luciferase-like monooxygenase PF364_08095 PF00083 Sugar (and other) transporter PF364_08105 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PF364_08110 PF00005 ABC transporter PF364_08115 PF00528 Binding-protein-dependent transport system inner membrane component PF364_08120 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PF364_08125 PF01177 Asp/Glu/Hydantoin racemase PF364_08130 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PF364_08140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_08140 PF03466 LysR substrate binding domain PF364_08150 PF13382 Adenine deaminase C-terminal domain PF364_08150 PF01979 Amidohydrolase family PF364_08160 PF03960 ArsC family PF364_08165 PF01022 Bacterial regulatory protein, arsR family PF364_08170 PF01758 Sodium Bile acid symporter family PF364_08175 PF03466 LysR substrate binding domain PF364_08175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_08190 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_08190 PF13192 Thioredoxin domain PF364_08205 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_08210 PF00588 SpoU rRNA Methylase family PF364_08215 PF07733 Bacterial DNA polymerase III alpha NTPase domain PF364_08215 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PF364_08215 PF14579 Helix-hairpin-helix motif PF364_08215 PF02811 PHP domain PF364_08215 PF01336 OB-fold nucleic acid binding domain PF364_08220 PF00710 Asparaginase, N-terminal PF364_08220 PF17763 Glutaminase/Asparaginase C-terminal domain PF364_08225 PF00375 Sodium:dicarboxylate symporter family PF364_08230 PF00155 Aminotransferase class I and II PF364_08235 PF01641 SelR domain PF364_08240 PF00255 Glutathione peroxidase PF364_08245 PF12852 Cupin PF364_08245 PF12833 Helix-turn-helix domain PF364_08255 PF00155 Aminotransferase class I and II PF364_08260 PF08335 GlnD PII-uridylyltransferase PF364_08260 PF01966 HD domain PF364_08260 PF01909 Nucleotidyltransferase domain PF364_08265 PF02222 ATP-grasp domain PF364_08275 PF05437 Branched-chain amino acid transport protein (AzlD) PF364_08280 PF03591 AzlC protein PF364_08305 PF06071 Protein of unknown function (DUF933) PF364_08305 PF01926 50S ribosome-binding GTPase PF364_08310 PF00528 Binding-protein-dependent transport system inner membrane component PF364_08315 PF00005 ABC transporter PF364_08315 PF09383 NIL domain PF364_08320 PF03180 NLPA lipoprotein PF364_08325 PF03180 NLPA lipoprotein PF364_08330 PF00296 Luciferase-like monooxygenase PF364_08340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_08340 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF364_08355 PF00528 Binding-protein-dependent transport system inner membrane component PF364_08360 PF00528 Binding-protein-dependent transport system inner membrane component PF364_08365 PF00005 ABC transporter PF364_08375 PF01037 Lrp/AsnC ligand binding domain PF364_08380 PF01709 Transcriptional regulator PF364_08390 PF00440 Bacterial regulatory proteins, tetR family PF364_08410 PF03466 LysR substrate binding domain PF364_08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_08420 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PF364_08430 PF00892 EamA-like transporter family PF364_08450 PF13953 PapC C-terminal domain PF364_08450 PF13954 PapC N-terminal domain PF364_08450 PF00577 Outer membrane usher protein PF364_08455 PF02753 Pili assembly chaperone PapD, C-terminal domain PF364_08455 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PF364_08460 PF16970 Type-1 fimbrial protein, A PF364_08475 PF06968 Biotin and Thiamin Synthesis associated domain PF364_08475 PF04055 Radical SAM superfamily PF364_08480 PF08331 Domain of unknown function (DUF1730) PF364_08485 PF03853 YjeF-related protein N-terminus PF364_08485 PF01256 Carbohydrate kinase PF364_08490 PF02075 Crossover junction endodeoxyribonuclease RuvC PF364_08505 PF00905 Penicillin binding protein transpeptidase domain PF364_08525 PF00438 S-adenosylmethionine synthetase, N-terminal domain PF364_08525 PF02772 S-adenosylmethionine synthetase, central domain PF364_08525 PF02773 S-adenosylmethionine synthetase, C-terminal domain PF364_08530 PF02779 Transketolase, pyrimidine binding domain PF364_08530 PF02780 Transketolase, C-terminal domain PF364_08530 PF00456 Transketolase, thiamine diphosphate binding domain PF364_08540 PF04264 YceI-like domain PF364_08550 PF09992 Phosphodiester glycosidase PF364_08560 PF05958 tRNA (Uracil-5-)-methyltransferase PF364_08565 PF04229 GrpB protein PF364_08570 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PF364_08570 PF14850 DNA-binding domain of Proline dehydrogenase PF364_08570 PF00171 Aldehyde dehydrogenase family PF364_08570 PF01619 Proline dehydrogenase PF364_08575 PF01037 Lrp/AsnC ligand binding domain PF364_08580 PF00474 Sodium:solute symporter family PF364_08585 PF02146 Sir2 family PF364_08590 PF01597 Glycine cleavage H-protein PF364_08595 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF364_08595 PF12833 Helix-turn-helix domain PF364_08605 PF00664 ABC transporter transmembrane region PF364_08605 PF00005 ABC transporter PF364_08610 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) PF364_08615 PF06912 Protein of unknown function (DUF1275) PF364_08620 PF00375 Sodium:dicarboxylate symporter family PF364_08635 PF08007 Cupin superfamily protein PF364_08640 PF02545 Maf-like protein PF364_08650 PF00162 Phosphoglycerate kinase PF364_08660 PF01116 Fructose-bisphosphate aldolase class-II PF364_08665 PF00639 PPIC-type PPIASE domain PF364_08665 PF09312 SurA N-terminal domain PF364_08670 PF04453 LPS transport system D PF364_08670 PF03968 OstA-like protein PF364_08675 PF01636 Phosphotransferase enzyme family PF364_08680 PF00483 Nucleotidyl transferase PF364_08685 PF02527 rRNA small subunit methyltransferase G PF364_08690 PF13614 AAA domain PF364_08695 PF17762 HTH domain found in ParB protein PF364_08695 PF02195 ParB-like nuclease domain PF364_08700 PF01618 MotA/TolQ/ExbB proton channel family PF364_08710 PF00664 ABC transporter transmembrane region PF364_08710 PF00005 ABC transporter PF364_08715 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PF364_08720 PF02348 Cytidylyltransferase PF364_08725 PF09115 DNA polymerase III, delta subunit, C terminal PF364_08735 PF01026 TatD related DNase PF364_08750 PF02501 Type II secretion system (T2SS), protein I PF364_08750 PF07963 Prokaryotic N-terminal methylation motif PF364_08755 PF07963 Prokaryotic N-terminal methylation motif PF364_08755 PF11612 Type II secretion system (T2SS), protein J PF364_08760 PF03934 Type II secretion system (T2SS), protein K PF364_08770 PF03167 Uracil DNA glycosylase superfamily PF364_08780 PF14437 MafB19-like deaminase PF364_08790 PF02224 Cytidylate kinase PF364_08795 PF00575 S1 RNA binding domain PF364_08800 PF00216 Bacterial DNA-binding protein PF364_08810 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PF364_08820 PF00743 Flavin-binding monooxygenase-like PF364_08830 PF03969 AFG1-like ATPase PF364_08835 PF01274 Malate synthase PF364_08845 PF02472 Biopolymer transport protein ExbD/TolR PF364_08850 PF02472 Biopolymer transport protein ExbD/TolR PF364_08855 PF01618 MotA/TolQ/ExbB proton channel family PF364_08865 PF00593 TonB dependent receptor PF364_08865 PF07715 TonB-dependent Receptor Plug Domain PF364_08870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PF364_08880 PF01432 Peptidase family M3 PF364_08885 PF00528 Binding-protein-dependent transport system inner membrane component PF364_08890 PF00528 Binding-protein-dependent transport system inner membrane component PF364_08895 PF00005 ABC transporter PF364_08895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PF364_08910 PF00459 Inositol monophosphatase family PF364_08920 PF01649 Ribosomal protein S20 PF364_08940 PF03737 Aldolase/RraA PF364_08960 PF17757 UvrB interaction domain PF364_08960 PF03461 TRCF domain PF364_08960 PF02559 CarD-like/TRCF domain PF364_08960 PF00271 Helicase conserved C-terminal domain PF364_08960 PF00270 DEAD/DEAH box helicase PF364_08970 PF00211 Adenylate and Guanylate cyclase catalytic domain PF364_08975 PF00111 2Fe-2S iron-sulfur cluster binding domain PF364_08980 PF00012 Hsp70 protein PF364_08985 PF00226 DnaJ domain PF364_08985 PF07743 HSCB C-terminal oligomerisation domain PF364_08990 PF01521 Iron-sulphur cluster biosynthesis PF364_08995 PF01592 NifU-like N terminal domain PF364_09000 PF00266 Aminotransferase class-V PF364_09005 PF02082 Transcriptional regulator PF364_09020 PF00216 Bacterial DNA-binding protein PF364_09025 PF00639 PPIC-type PPIASE domain PF364_09025 PF09312 SurA N-terminal domain PF364_09030 PF12852 Cupin PF364_09030 PF12833 Helix-turn-helix domain PF364_09035 PF00487 Fatty acid desaturase PF364_09040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_09040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_09040 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_09045 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_09045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_09045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_09050 PF03109 ABC1 family PF364_09060 PF04073 Aminoacyl-tRNA editing domain PF364_09065 PF04183 IucA / IucC family PF364_09065 PF06276 Ferric iron reductase FhuF-like transporter PF364_09070 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PF364_09075 PF07690 Major Facilitator Superfamily PF364_09080 PF06276 Ferric iron reductase FhuF-like transporter PF364_09080 PF04183 IucA / IucC family PF364_09085 PF06276 Ferric iron reductase FhuF-like transporter PF364_09085 PF04183 IucA / IucC family PF364_09095 PF03737 Aldolase/RraA PF364_09100 PF00593 TonB dependent receptor PF364_09100 PF07715 TonB-dependent Receptor Plug Domain PF364_09125 PF13419 Haloacid dehalogenase-like hydrolase PF364_09135 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PF364_09140 PF02277 Phosphoribosyltransferase PF364_09145 PF00300 Histidine phosphatase superfamily (branch 1) PF364_09155 PF02654 Cobalamin-5-phosphate synthase PF364_09160 PF00793 DAHP synthetase I family PF364_09165 PF01925 Sulfite exporter TauE/SafE PF364_09185 PF07715 TonB-dependent Receptor Plug Domain PF364_09185 PF00593 TonB dependent receptor PF364_09190 PF02684 Lipid-A-disaccharide synthetase PF364_09200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF364_09205 PF00005 ABC transporter PF364_09240 PF01230 HIT domain PF364_09270 PF08241 Methyltransferase domain PF364_09275 PF00561 alpha/beta hydrolase fold PF364_09280 PF01053 Cys/Met metabolism PLP-dependent enzyme PF364_09290 PF02575 YbaB/EbfC DNA-binding family PF364_09295 PF13662 Toprim domain PF364_09295 PF02132 RecR protein PF364_09300 PF00570 HRDC domain PF364_09300 PF01612 3'-5' exonuclease PF364_09320 PF05166 YcgL domain PF364_09330 PF01434 Peptidase family M41 PF364_09330 PF00004 ATPase family associated with various cellular activities (AAA) PF364_09330 PF17862 AAA+ lid domain PF364_09340 PF00291 Pyridoxal-phosphate dependent enzyme PF364_09345 PF05175 Methyltransferase small domain PF364_09350 PF01264 Chorismate synthase PF364_09355 PF00990 Diguanylate cyclase, GGDEF domain PF364_09355 PF08448 PAS fold PF364_09370 PF04055 Radical SAM superfamily PF364_09375 PF00676 Dehydrogenase E1 component PF364_09380 PF02780 Transketolase, C-terminal domain PF364_09380 PF02779 Transketolase, pyrimidine binding domain PF364_09385 PF00364 Biotin-requiring enzyme PF364_09385 PF02817 e3 binding domain PF364_09385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PF364_09390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF364_09390 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_09395 PF00106 short chain dehydrogenase PF364_09400 PF00107 Zinc-binding dehydrogenase PF364_09400 PF08240 Alcohol dehydrogenase GroES-like domain PF364_09405 PF01062 Bestrophin, RFP-TM, chloride channel PF364_09410 PF02954 Bacterial regulatory protein, Fis family PF364_09410 PF00072 Response regulator receiver domain PF364_09410 PF00158 Sigma-54 interaction domain PF364_09415 PF04273 Putative phosphatase (DUF442) PF364_09415 PF00753 Metallo-beta-lactamase superfamily PF364_09430 PF01925 Sulfite exporter TauE/SafE PF364_09445 PF06445 GyrI-like small molecule binding domain PF364_09445 PF12833 Helix-turn-helix domain PF364_09450 PF01638 HxlR-like helix-turn-helix PF364_09455 PF02525 Flavodoxin-like fold PF364_09475 PF00392 Bacterial regulatory proteins, gntR family PF364_09475 PF07702 UTRA domain PF364_09490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PF364_09495 PF00528 Binding-protein-dependent transport system inner membrane component PF364_09500 PF00005 ABC transporter PF364_09515 PF00083 Sugar (and other) transporter PF364_09520 PF07715 TonB-dependent Receptor Plug Domain PF364_09520 PF00593 TonB dependent receptor PF364_09525 PF10415 Fumarase C C-terminus PF364_09525 PF00206 Lyase PF364_09540 PF03466 LysR substrate binding domain PF364_09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_09545 PF03466 LysR substrate binding domain PF364_09545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_09550 PF00108 Thiolase, N-terminal domain PF364_09550 PF02803 Thiolase, C-terminal domain PF364_09555 PF02667 Short chain fatty acid transporter PF364_09560 PF01144 Coenzyme A transferase PF364_09565 PF01144 Coenzyme A transferase PF364_09570 PF03466 LysR substrate binding domain PF364_09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_09590 PF12833 Helix-turn-helix domain PF364_09590 PF06719 AraC-type transcriptional regulator N-terminus PF364_09595 PF07690 Major Facilitator Superfamily PF364_09600 PF01738 Dienelactone hydrolase family PF364_09615 PF01613 Flavin reductase like domain PF364_09625 PF14525 AraC-binding-like domain PF364_09625 PF12833 Helix-turn-helix domain PF364_09630 PF00175 Oxidoreductase NAD-binding domain PF364_09630 PF00970 Oxidoreductase FAD-binding domain PF364_09630 PF00111 2Fe-2S iron-sulfur cluster binding domain PF364_09635 PF00866 Ring hydroxylating beta subunit PF364_09640 PF00355 Rieske [2Fe-2S] domain PF364_09640 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF364_09645 PF03459 TOBE domain PF364_09645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_09655 PF00528 Binding-protein-dependent transport system inner membrane component PF364_09660 PF03459 TOBE domain PF364_09660 PF00005 ABC transporter PF364_09665 PF00106 short chain dehydrogenase PF364_09670 PF00857 Isochorismatase family PF364_09670 PF00550 Phosphopantetheine attachment site PF364_09680 PF00149 Calcineurin-like phosphoesterase PF364_09685 PF02503 Polyphosphate kinase middle domain PF364_09685 PF13090 Polyphosphate kinase C-terminal domain 2 PF364_09685 PF17941 Polyphosphate kinase C-terminal domain 1 PF364_09685 PF13089 Polyphosphate kinase N-terminal domain PF364_09690 PF08042 PqqA family PF364_09695 PF12706 Beta-lactamase superfamily domain PF364_09700 PF03070 TENA/THI-4/PQQC family PF364_09705 PF05402 Coenzyme PQQ synthesis protein D (PqqD) PF364_09710 PF04055 Radical SAM superfamily PF364_09710 PF13186 Iron-sulfur cluster-binding domain PF364_09715 PF01244 Membrane dipeptidase (Peptidase family M19) PF364_09730 PF13091 PLD-like domain PF364_09745 PF00199 Catalase PF364_09755 PF08240 Alcohol dehydrogenase GroES-like domain PF364_09755 PF00107 Zinc-binding dehydrogenase PF364_09785 PF00550 Phosphopantetheine attachment site PF364_09785 PF07993 Male sterility protein PF364_09790 PF07690 Major Facilitator Superfamily PF364_09795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_09815 PF01975 Survival protein SurE PF364_09840 PF07690 Major Facilitator Superfamily PF364_09845 PF13533 Biotin-lipoyl like PF364_09860 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PF364_09865 PF14572 Phosphoribosyl synthetase-associated domain PF364_09865 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PF364_09885 PF00005 ABC transporter PF364_09890 PF01032 FecCD transport family PF364_09900 PF08240 Alcohol dehydrogenase GroES-like domain PF364_09900 PF00107 Zinc-binding dehydrogenase PF364_09915 PF06719 AraC-type transcriptional regulator N-terminus PF364_09915 PF12833 Helix-turn-helix domain PF364_09920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PF364_09920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PF364_09925 PF07690 Major Facilitator Superfamily PF364_09930 PF01370 NAD dependent epimerase/dehydratase family PF364_09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_09935 PF03466 LysR substrate binding domain PF364_09945 PF00920 Dehydratase family PF364_09950 PF00171 Aldehyde dehydrogenase family PF364_09955 PF01047 MarR family PF364_09960 PF01613 Flavin reductase like domain PF364_09965 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF364_09970 PF07690 Major Facilitator Superfamily PF364_09970 PF00083 Sugar (and other) transporter PF364_09975 PF00171 Aldehyde dehydrogenase family PF364_09980 PF03328 HpcH/HpaI aldolase/citrate lyase family PF364_09985 PF01557 Fumarylacetoacetate (FAA) hydrolase family PF364_09990 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase PF364_09995 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PF364_10000 PF00171 Aldehyde dehydrogenase family PF364_10005 PF01557 Fumarylacetoacetate (FAA) hydrolase family PF364_10010 PF01557 Fumarylacetoacetate (FAA) hydrolase family PF364_10020 PF07690 Major Facilitator Superfamily PF364_10025 PF00579 tRNA synthetases class I (W and Y) PF364_10040 PF00171 Aldehyde dehydrogenase family PF364_10060 PF01266 FAD dependent oxidoreductase PF364_10070 PF00893 Small Multidrug Resistance protein PF364_10080 PF01266 FAD dependent oxidoreductase PF364_10085 PF00072 Response regulator receiver domain PF364_10085 PF12833 Helix-turn-helix domain PF364_10100 PF13533 Biotin-lipoyl like PF364_10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_10115 PF03466 LysR substrate binding domain PF364_10125 PF08450 SMP-30/Gluconolactonase/LRE-like region PF364_10130 PF07702 UTRA domain PF364_10130 PF00392 Bacterial regulatory proteins, gntR family PF364_10140 PF04909 Amidohydrolase PF364_10145 PF07690 Major Facilitator Superfamily PF364_10150 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) PF364_10185 PF07687 Peptidase dimerisation domain PF364_10185 PF01546 Peptidase family M20/M25/M40 PF364_10195 PF00999 Sodium/hydrogen exchanger family PF364_10195 PF02254 TrkA-N domain PF364_10200 PF07995 Glucose / Sorbosone dehydrogenase PF364_10205 PF03466 LysR substrate binding domain PF364_10205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_10210 PF00857 Isochorismatase family PF364_10220 PF08359 YsiA-like protein, C-terminal region PF364_10220 PF00440 Bacterial regulatory proteins, tetR family PF364_10225 PF12706 Beta-lactamase superfamily domain PF364_10235 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_10245 PF00376 MerR family regulatory protein PF364_10245 PF09278 MerR, DNA binding PF364_10255 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_10255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF364_10260 PF01047 MarR family PF364_10265 PF07859 alpha/beta hydrolase fold PF364_10280 PF00199 Catalase PF364_10280 PF06628 Catalase-related immune-responsive PF364_10285 PF00561 alpha/beta hydrolase fold PF364_10295 PF00171 Aldehyde dehydrogenase family PF364_10300 PF08240 Alcohol dehydrogenase GroES-like domain PF364_10300 PF00107 Zinc-binding dehydrogenase PF364_10305 PF00474 Sodium:solute symporter family PF364_10310 PF04341 Protein of unknown function, DUF485 PF364_10315 PF13193 AMP-binding enzyme C-terminal domain PF364_10315 PF00501 AMP-binding enzyme PF364_10320 PF02954 Bacterial regulatory protein, Fis family PF364_10320 PF06506 Propionate catabolism activator PF364_10320 PF00158 Sigma-54 interaction domain PF364_10330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_10330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_10330 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_10345 PF01636 Phosphotransferase enzyme family PF364_10350 PF00171 Aldehyde dehydrogenase family PF364_10360 PF07690 Major Facilitator Superfamily PF364_10365 PF00920 Dehydratase family PF364_10370 PF00392 Bacterial regulatory proteins, gntR family PF364_10370 PF07729 FCD domain PF364_10380 PF03466 LysR substrate binding domain PF364_10380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_10385 PF13378 Enolase C-terminal domain-like PF364_10385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PF364_10390 PF02426 Muconolactone delta-isomerase PF364_10395 PF04444 Catechol dioxygenase N terminus PF364_10395 PF00775 Dioxygenase PF364_10400 PF01144 Coenzyme A transferase PF364_10405 PF01144 Coenzyme A transferase PF364_10410 PF00108 Thiolase, N-terminal domain PF364_10410 PF02803 Thiolase, C-terminal domain PF364_10415 PF12146 Serine aminopeptidase, S33 PF364_10420 PF01804 Penicillin amidase PF364_10425 PF00171 Aldehyde dehydrogenase family PF364_10435 PF02728 Copper amine oxidase, N3 domain PF364_10435 PF01179 Copper amine oxidase, enzyme domain PF364_10435 PF07833 Copper amine oxidase N-terminal domain PF364_10435 PF02727 Copper amine oxidase, N2 domain PF364_10440 PF12833 Helix-turn-helix domain PF364_10440 PF02311 AraC-like ligand binding domain PF364_10445 PF01613 Flavin reductase like domain PF364_10450 PF00175 Oxidoreductase NAD-binding domain PF364_10450 PF00111 2Fe-2S iron-sulfur cluster binding domain PF364_10465 PF00355 Rieske [2Fe-2S] domain PF364_10465 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PF364_10480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF364_10485 PF01425 Amidase PF364_10495 PF07690 Major Facilitator Superfamily PF364_10505 PF00106 short chain dehydrogenase PF364_10520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_10520 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_10520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_10525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_10525 PF03466 LysR substrate binding domain PF364_10530 PF01614 Bacterial transcriptional regulator PF364_10530 PF09339 IclR helix-turn-helix domain PF364_10535 PF00753 Metallo-beta-lactamase superfamily PF364_10545 PF04143 Sulphur transport PF364_10555 PF01011 PQQ enzyme repeat PF364_10555 PF13360 PQQ-like domain PF364_10560 PF04966 Carbohydrate-selective porin, OprB family PF364_10565 PF05048 Periplasmic copper-binding protein (NosD) PF364_10570 PF01487 Type I 3-dehydroquinase PF364_10575 PF00775 Dioxygenase PF364_10580 PF00775 Dioxygenase PF364_10580 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal PF364_10585 PF02627 Carboxymuconolactone decarboxylase family PF364_10590 PF07690 Major Facilitator Superfamily PF364_10595 PF00561 alpha/beta hydrolase fold PF364_10600 PF10397 Adenylosuccinate lyase C-terminus PF364_10600 PF00206 Lyase PF364_10605 PF02803 Thiolase, C-terminal domain PF364_10605 PF00108 Thiolase, N-terminal domain PF364_10610 PF01144 Coenzyme A transferase PF364_10615 PF01144 Coenzyme A transferase PF364_10620 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PF364_10625 PF04977 Septum formation initiator PF364_10630 PF04239 Protein of unknown function (DUF421) PF364_10635 PF00113 Enolase, C-terminal TIM barrel domain PF364_10635 PF03952 Enolase, N-terminal domain PF364_10640 PF00793 DAHP synthetase I family PF364_10645 PF06418 CTP synthase N-terminus PF364_10645 PF00117 Glutamine amidotransferase class-I PF364_10675 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_10675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF364_10690 PF00793 DAHP synthetase I family PF364_10695 PF02694 Uncharacterised BCR, YnfA/UPF0060 family PF364_10700 PF17871 AAA lid domain PF364_10700 PF02861 Clp amino terminal domain, pathogenicity island component PF364_10700 PF00004 ATPase family associated with various cellular activities (AAA) PF364_10700 PF07724 AAA domain (Cdc48 subfamily) PF364_10700 PF10431 C-terminal, D2-small domain, of ClpB protein PF364_10705 PF02617 ATP-dependent Clp protease adaptor protein ClpS PF364_10715 PF01118 Semialdehyde dehydrogenase, NAD binding domain PF364_10715 PF02774 Semialdehyde dehydrogenase, dimerisation domain PF364_10730 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PF364_10735 PF00585 C-terminal regulatory domain of Threonine dehydratase PF364_10735 PF00291 Pyridoxal-phosphate dependent enzyme PF364_10740 PF02080 TrkA-C domain PF364_10740 PF02254 TrkA-N domain PF364_10745 PF02386 Cation transport protein PF364_10750 PF02253 Phospholipase A1 PF364_10755 PF08367 Peptidase M16C associated PF364_10755 PF05193 Peptidase M16 inactive domain PF364_10755 PF00675 Insulinase (Peptidase family M16) PF364_10760 PF07715 TonB-dependent Receptor Plug Domain PF364_10760 PF00593 TonB dependent receptor PF364_10765 PF00294 pfkB family carbohydrate kinase PF364_10775 PF07290 Protein of unknown function (DUF1449) PF364_10785 PF01654 Cytochrome bd terminal oxidase subunit I PF364_10790 PF02322 Cytochrome bd terminal oxidase subunit II PF364_10795 PF08173 Membrane bound YbgT-like protein PF364_10805 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) PF364_10815 PF00448 SRP54-type protein, GTPase domain PF364_10815 PF02881 SRP54-type protein, helical bundle domain PF364_10840 PF00571 CBS domain PF364_10840 PF00478 IMP dehydrogenase / GMP reductase domain PF364_10845 PF00202 Aminotransferase class-III PF364_10850 PF00462 Glutaredoxin PF364_10860 PF03466 LysR substrate binding domain PF364_10860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_10865 PF00557 Metallopeptidase family M24 PF364_10870 PF05525 Branched-chain amino acid transport protein PF364_10895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PF364_10895 PF00381 PTS HPr component phosphorylation site PF364_10895 PF00391 PEP-utilising enzyme, mobile domain PF364_10895 PF02896 PEP-utilising enzyme, TIM barrel domain PF364_10895 PF05524 PEP-utilising enzyme, N-terminal PF364_10900 PF00294 pfkB family carbohydrate kinase PF364_10905 PF02378 Phosphotransferase system, EIIC PF364_10905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PF364_10925 PF00990 Diguanylate cyclase, GGDEF domain PF364_10925 PF03707 Bacterial signalling protein N terminal repeat PF364_10925 PF00563 EAL domain PF364_10935 PF07995 Glucose / Sorbosone dehydrogenase PF364_10940 PF02586 SOS response associated peptidase (SRAP) PF364_10945 PF01740 STAS domain PF364_10945 PF00916 Sulfate permease family PF364_10950 PF05922 Peptidase inhibitor I9 PF364_10950 PF00082 Subtilase family PF364_10965 PF00324 Amino acid permease PF364_10970 PF00266 Aminotransferase class-V PF364_10975 PF01037 Lrp/AsnC ligand binding domain PF364_11000 PF13419 Haloacid dehalogenase-like hydrolase PF364_11005 PF01479 S4 domain PF364_11010 PF00154 recA bacterial DNA recombination protein PF364_11015 PF02631 RecX family PF364_11030 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PF364_11030 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_11035 PF07977 FabA-like domain PF364_11040 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_11040 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PF364_11050 PF01103 Surface antigen PF364_11050 PF07244 Surface antigen variable number repeat PF364_11055 PF13180 PDZ domain PF364_11055 PF17820 PDZ domain PF364_11055 PF02163 Peptidase family M50 PF364_11060 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PF364_11060 PF13288 DXP reductoisomerase C-terminal domain PF364_11060 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PF364_11070 PF01255 Putative undecaprenyl diphosphate synthase PF364_11075 PF01765 Ribosome recycling factor PF364_11080 PF00696 Amino acid kinase family PF364_11085 PF04055 Radical SAM superfamily PF364_11085 PF18693 TRAM domain PF364_11085 PF00919 Uncharacterized protein family UPF0004 PF364_11090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_11090 PF00989 PAS fold PF364_11090 PF00512 His Kinase A (phospho-acceptor) domain PF364_11095 PF00158 Sigma-54 interaction domain PF364_11095 PF02954 Bacterial regulatory protein, Fis family PF364_11095 PF00072 Response regulator receiver domain PF364_11105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PF364_11105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PF364_11115 PF02542 YgbB family PF364_11125 PF01266 FAD dependent oxidoreductase PF364_11145 PF10415 Fumarase C C-terminus PF364_11145 PF00206 Lyase PF364_11150 PF16363 GDP-mannose 4,6 dehydratase PF364_11155 PF02635 DsrE/DsrF-like family PF364_11175 PF00892 EamA-like transporter family PF364_11180 PF00392 Bacterial regulatory proteins, gntR family PF364_11180 PF00155 Aminotransferase class I and II PF364_11185 PF01638 HxlR-like helix-turn-helix PF364_11190 PF03453 MoeA N-terminal region (domain I and II) PF364_11190 PF00994 Probable molybdopterin binding domain PF364_11190 PF03454 MoeA C-terminal region (domain IV) PF364_11195 PF00994 Probable molybdopterin binding domain PF364_11195 PF01967 MoaC family PF364_11200 PF02391 MoaE protein PF364_11210 PF06463 Molybdenum Cofactor Synthesis C PF364_11210 PF04055 Radical SAM superfamily PF364_11215 PF01568 Molydopterin dinucleotide binding domain PF364_11215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PF364_11215 PF00384 Molybdopterin oxidoreductase PF364_11220 PF12804 MobA-like NTP transferase domain PF364_11225 PF04324 BFD-like [2Fe-2S] binding domain PF364_11225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PF364_11225 PF00384 Molybdopterin oxidoreductase PF364_11225 PF01568 Molydopterin dinucleotide binding domain PF364_11230 PF18267 Rubredoxin NAD+ reductase C-terminal domain PF364_11230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PF364_11230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PF364_11230 PF04324 BFD-like [2Fe-2S] binding domain PF364_11230 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_11235 PF04324 BFD-like [2Fe-2S] binding domain PF364_11235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PF364_11235 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_11235 PF13806 Rieske-like [2Fe-2S] domain PF364_11235 PF18267 Rubredoxin NAD+ reductase C-terminal domain PF364_11235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PF364_11245 PF00072 Response regulator receiver domain PF364_11245 PF00486 Transcriptional regulatory protein, C terminal PF364_11250 PF00005 ABC transporter PF364_11260 PF13438 Domain of unknown function (DUF4113) PF364_11260 PF00817 impB/mucB/samB family PF364_11260 PF11799 impB/mucB/samB family C-terminal domain PF364_11265 PF01220 Dehydroquinase class II PF364_11270 PF00364 Biotin-requiring enzyme PF364_11275 PF02785 Biotin carboxylase C-terminal domain PF364_11275 PF00289 Biotin carboxylase, N-terminal domain PF364_11275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF364_11285 PF12832 MFS_1 like family PF364_11305 PF00182 Chitinase class I PF364_11495 PF02498 BRO family, N-terminal domain PF364_11495 PF10548 P22AR C-terminal domain PF364_11655 PF01645 Conserved region in glutamate synthase PF364_11670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PF364_11670 PF01565 FAD binding domain PF364_11675 PF01451 Low molecular weight phosphotyrosine protein phosphatase PF364_11685 PF00465 Iron-containing alcohol dehydrogenase PF364_11690 PF03061 Thioesterase superfamily PF364_11695 PF04185 Phosphoesterase family PF364_11695 PF05506 Domain of unknown function (DUF756) PF364_11700 PF12169 DNA polymerase III subunits gamma and tau domain III PF364_11700 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PF364_11700 PF12170 DNA polymerase III tau subunit V interacting with alpha PF364_11705 PF07690 Major Facilitator Superfamily PF364_11715 PF00144 Beta-lactamase PF364_11720 PF01575 MaoC like domain PF364_11730 PF02803 Thiolase, C-terminal domain PF364_11730 PF00108 Thiolase, N-terminal domain PF364_11740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_11740 PF03466 LysR substrate binding domain PF364_11745 PF00923 Transaldolase/Fructose-6-phosphate aldolase PF364_11750 PF01810 LysE type translocator PF364_11755 PF01037 Lrp/AsnC ligand binding domain PF364_11760 PF03594 Benzoate membrane transport protein PF364_11765 PF02308 MgtC family PF364_11770 PF00689 Cation transporting ATPase, C-terminus PF364_11770 PF00690 Cation transporter/ATPase, N-terminus PF364_11795 PF00582 Universal stress protein family PF364_11800 PF00005 ABC transporter PF364_11800 PF12848 ABC transporter PF364_11820 PF07715 TonB-dependent Receptor Plug Domain PF364_11820 PF00593 TonB dependent receptor PF364_11850 PF00924 Mechanosensitive ion channel PF364_11855 PF07715 TonB-dependent Receptor Plug Domain PF364_11855 PF00593 TonB dependent receptor PF364_11860 PF00440 Bacterial regulatory proteins, tetR family PF364_11875 PF01037 Lrp/AsnC ligand binding domain PF364_11880 PF01817 Chorismate mutase type II PF364_11900 PF11940 Domain of unknown function (DUF3458) Ig-like fold PF364_11900 PF17432 Domain of unknown function (DUF3458_C) ARM repeats PF364_11900 PF01433 Peptidase family M1 domain PF364_11915 PF02110 Hydroxyethylthiazole kinase family PF364_11920 PF06445 GyrI-like small molecule binding domain PF364_11930 PF14493 Helix-turn-helix domain PF364_11930 PF05970 PIF1-like helicase PF364_11935 PF00465 Iron-containing alcohol dehydrogenase PF364_11950 PF00171 Aldehyde dehydrogenase family PF364_11955 PF13520 Amino acid permease PF364_11960 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PF364_11965 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PF364_11970 PF00117 Glutamine amidotransferase class-I PF364_11970 PF00958 GMP synthase C terminal domain PF364_11970 PF02540 NAD synthase PF364_11975 PF00749 tRNA synthetases class I (E and Q), catalytic domain PF364_11975 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PF364_11980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PF364_11985 PF00149 Calcineurin-like phosphoesterase PF364_11995 PF00881 Nitroreductase family PF364_12005 PF17209 Hfq protein PF364_12015 PF01119 DNA mismatch repair protein, C-terminal domain PF364_12015 PF08676 MutL C terminal dimerisation domain PF364_12020 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PF364_12025 PF00849 RNA pseudouridylate synthase PF364_12025 PF01479 S4 domain PF364_12040 PF01479 S4 domain PF364_12040 PF00849 RNA pseudouridylate synthase PF364_12050 PF04284 Protein of unknown function (DUF441) PF364_12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_12055 PF03466 LysR substrate binding domain PF364_12070 PF07690 Major Facilitator Superfamily PF364_12075 PF00027 Cyclic nucleotide-binding domain PF364_12075 PF00520 Ion transport protein PF364_12085 PF11791 Aconitate B N-terminal domain PF364_12085 PF00330 Aconitase family (aconitate hydratase) PF364_12085 PF06434 Aconitate hydratase 2 N-terminus PF364_12100 PF01103 Surface antigen PF364_12100 PF07244 Surface antigen variable number repeat PF364_12100 PF17243 POTRA domain TamA domain 1 PF364_12105 PF07690 Major Facilitator Superfamily PF364_12110 PF03232 Ubiquinone biosynthesis protein COQ7 PF364_12120 PF00120 Glutamine synthetase, catalytic domain PF364_12125 PF00486 Transcriptional regulatory protein, C terminal PF364_12125 PF00072 Response regulator receiver domain PF364_12130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_12130 PF00512 His Kinase A (phospho-acceptor) domain PF364_12130 PF13493 Domain of unknown function (DUF4118) PF364_12130 PF02702 Osmosensitive K+ channel His kinase sensor domain PF364_12135 PF02669 K+-transporting ATPase, c chain PF364_12145 PF03814 Potassium-transporting ATPase A subunit PF364_12155 PF02152 Dihydroneopterin aldolase PF364_12160 PF03109 ABC1 family PF364_12165 PF00899 ThiF family PF364_12170 PF01613 Flavin reductase like domain PF364_12175 PF13193 AMP-binding enzyme C-terminal domain PF364_12175 PF00501 AMP-binding enzyme PF364_12180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_12180 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_12180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_12185 PF00106 short chain dehydrogenase PF364_12190 PF12833 Helix-turn-helix domain PF364_12195 PF09084 NMT1/THI5 like PF364_12200 PF00528 Binding-protein-dependent transport system inner membrane component PF364_12205 PF13847 Methyltransferase domain PF364_12205 PF17827 PrmC N-terminal domain PF364_12210 PF03462 PCRF domain PF364_12210 PF00472 RF-1 domain PF364_12220 PF03466 LysR substrate binding domain PF364_12220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_12235 PF00296 Luciferase-like monooxygenase PF364_12245 PF13994 PgaD-like protein PF364_12250 PF00535 Glycosyl transferase family 2 PF364_12255 PF14883 Hypothetical glycosyl hydrolase family 13 PF364_12255 PF01522 Polysaccharide deacetylase PF364_12265 PF03618 Kinase/pyrophosphorylase PF364_12270 PF00391 PEP-utilising enzyme, mobile domain PF364_12270 PF02896 PEP-utilising enzyme, TIM barrel domain PF364_12270 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PF364_12280 PF06481 COX Aromatic Rich Motif PF364_12280 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PF364_12285 PF00115 Cytochrome C and Quinol oxidase polypeptide I PF364_12290 PF00510 Cytochrome c oxidase subunit III PF364_12295 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PF364_12300 PF01040 UbiA prenyltransferase family PF364_12305 PF01250 Ribosomal protein S6 PF364_12310 PF01084 Ribosomal protein S18 PF364_12315 PF03948 Ribosomal protein L9, C-terminal domain PF364_12315 PF01281 Ribosomal protein L9, N-terminal domain PF364_12320 PF00772 DnaB-like helicase N terminal domain PF364_12320 PF03796 DnaB-like helicase C terminal domain PF364_12325 PF00842 Alanine racemase, C-terminal domain PF364_12325 PF01168 Alanine racemase, N-terminal domain PF364_12335 PF08379 Bacterial transglutaminase-like N-terminal region PF364_12335 PF01841 Transglutaminase-like superfamily PF364_12345 PF14403 Circularly permuted ATP-grasp type 2 PF364_12355 PF01134 Glucose inhibited division protein A PF364_12355 PF13932 GidA associated domain PF364_12375 PF02954 Bacterial regulatory protein, Fis family PF364_12380 PF01808 AICARFT/IMPCHase bienzyme PF364_12380 PF02142 MGS-like domain PF364_12385 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PF364_12385 PF02843 Phosphoribosylglycinamide synthetase, C domain PF364_12385 PF02844 Phosphoribosylglycinamide synthetase, N domain PF364_12390 PF03180 NLPA lipoprotein PF364_12395 PF09383 NIL domain PF364_12395 PF00005 ABC transporter PF364_12400 PF00528 Binding-protein-dependent transport system inner membrane component PF364_12405 PF00753 Metallo-beta-lactamase superfamily PF364_12405 PF16123 Hydroxyacylglutathione hydrolase C-terminus PF364_12415 PF00375 Sodium:dicarboxylate symporter family PF364_12435 PF07995 Glucose / Sorbosone dehydrogenase PF364_12440 PF00892 EamA-like transporter family PF364_12445 PF01177 Asp/Glu/Hydantoin racemase PF364_12455 PF02470 MlaD protein PF364_12460 PF04403 Paraquat-inducible protein A PF364_12490 PF08946 Osmosensory transporter coiled coil PF364_12490 PF00083 Sugar (and other) transporter PF364_12500 PF07729 FCD domain PF364_12500 PF00392 Bacterial regulatory proteins, gntR family PF364_12510 PF03616 Sodium/glutamate symporter PF364_12515 PF00561 alpha/beta hydrolase fold PF364_12540 PF04076 Bacterial OB fold (BOF) protein PF364_12570 PF00324 Amino acid permease PF364_12575 PF00171 Aldehyde dehydrogenase family PF364_12580 PF00202 Aminotransferase class-III PF364_12585 PF03466 LysR substrate binding domain PF364_12585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_12610 PF03793 PASTA domain PF364_12610 PF00069 Protein kinase domain PF364_12630 PF00814 Glycoprotease family PF364_12635 PF01165 Ribosomal protein S21 PF364_12640 PF09424 Yqey-like protein PF364_12645 PF01435 Peptidase family M48 PF364_12650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF364_12650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF364_12665 PF00156 Phosphoribosyl transferase domain PF364_12670 PF02674 Colicin V production protein PF364_12675 PF01180 Dihydroorotate dehydrogenase PF364_12695 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PF364_12695 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PF364_12700 PF00881 Nitroreductase family PF364_12710 PF00270 DEAD/DEAH box helicase PF364_12710 PF00271 Helicase conserved C-terminal domain PF364_12715 PF00313 'Cold-shock' DNA-binding domain PF364_12730 PF00140 Sigma-70 factor, region 1.2 PF364_12730 PF04542 Sigma-70 region 2 PF364_12730 PF04545 Sigma-70, region 4 PF364_12735 PF04241 Protein of unknown function (DUF423) PF364_12745 PF05690 Thiazole biosynthesis protein ThiG PF364_12755 PF03883 Peroxide stress protein YaaA PF364_12765 PF06956 Regulator of RNA terminal phosphate cyclase PF364_12765 PF00158 Sigma-54 interaction domain PF364_12770 PF00753 Metallo-beta-lactamase superfamily PF364_12775 PF01139 tRNA-splicing ligase RtcB PF364_12790 PF01137 RNA 3'-terminal phosphate cyclase PF364_12790 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain PF364_12795 PF01546 Peptidase family M20/M25/M40 PF364_12795 PF07687 Peptidase dimerisation domain PF364_12815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PF364_12820 PF01817 Chorismate mutase type II PF364_12820 PF00800 Prephenate dehydratase PF364_12820 PF01842 ACT domain PF364_12825 PF00756 Putative esterase PF364_12830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_12830 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_12830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_12835 PF00375 Sodium:dicarboxylate symporter family PF364_12840 PF02885 Glycosyl transferase family, helical bundle domain PF364_12840 PF00591 Glycosyl transferase family, a/b domain PF364_12845 PF07023 Protein of unknown function (DUF1315) PF364_12850 PF01513 ATP-NAD kinase PF364_12855 PF14814 Bifunctional transglycosylase second domain PF364_12855 PF00912 Transglycosylase PF364_12855 PF00905 Penicillin binding protein transpeptidase domain PF364_12865 PF00293 NUDIX domain PF364_12875 PF08521 Two-component sensor kinase N-terminal PF364_12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_12875 PF00512 His Kinase A (phospho-acceptor) domain PF364_12880 PF00072 Response regulator receiver domain PF364_12880 PF00486 Transcriptional regulatory protein, C terminal PF364_12890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PF364_12890 PF00437 Type II/IV secretion system protein PF364_12900 PF18389 TrmO C-terminal domain PF364_12900 PF01980 tRNA-methyltransferase O PF364_12905 PF00175 Oxidoreductase NAD-binding domain PF364_12905 PF00970 Oxidoreductase FAD-binding domain PF364_12910 PF02567 Phenazine biosynthesis-like protein PF364_12915 PF00155 Aminotransferase class I and II PF364_12915 PF00392 Bacterial regulatory proteins, gntR family PF364_12920 PF01136 Peptidase family U32 PF364_12920 PF16325 Peptidase family U32 C-terminal domain PF364_12925 PF00037 4Fe-4S binding domain PF364_12930 PF00893 Small Multidrug Resistance protein PF364_12935 PF00005 ABC transporter PF364_12940 PF00528 Binding-protein-dependent transport system inner membrane component PF364_12945 PF00528 Binding-protein-dependent transport system inner membrane component PF364_12950 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF364_12955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_12955 PF03466 LysR substrate binding domain PF364_12960 PF13533 Biotin-lipoyl like PF364_12965 PF00873 AcrB/AcrD/AcrF family PF364_12970 PF02321 Outer membrane efflux protein PF364_12975 PF00464 Serine hydroxymethyltransferase PF364_13005 PF00005 ABC transporter PF364_13010 PF01061 ABC-2 type transporter PF364_13015 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PF364_13015 PF14489 QueF-like protein PF364_13025 PF01098 Cell cycle protein PF364_13030 PF13406 Transglycosylase SLT domain PF364_13035 PF03330 Lytic transglycolase PF364_13035 PF05036 Sporulation related domain PF364_13055 PF12833 Helix-turn-helix domain PF364_13065 PF00889 Elongation factor TS PF364_13070 PF00318 Ribosomal protein S2 PF364_13075 PF00557 Metallopeptidase family M24 PF364_13085 PF07690 Major Facilitator Superfamily PF364_13095 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_13095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF364_13100 PF04055 Radical SAM superfamily PF364_13105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_13105 PF09317 Domain of unknown function (DUF1974) PF364_13105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_13120 PF05221 S-adenosyl-L-homocysteine hydrolase PF364_13120 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PF364_13125 PF02219 Methylenetetrahydrofolate reductase PF364_13130 PF04452 RNA methyltransferase PF364_13135 PF00563 EAL domain PF364_13135 PF00990 Diguanylate cyclase, GGDEF domain PF364_13135 PF03707 Bacterial signalling protein N terminal repeat PF364_13140 PF00390 Malic enzyme, N-terminal domain PF364_13140 PF03949 Malic enzyme, NAD binding domain PF364_13140 PF01515 Phosphate acetyl/butaryl transferase PF364_13145 PF01743 Poly A polymerase head domain PF364_13145 PF12627 Probable RNA and SrmB- binding site of polymerase A PF364_13150 PF13180 PDZ domain PF364_13155 PF01784 NIF3 (NGG1p interacting factor 3) PF364_13160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PF364_13160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PF364_13195 PF01040 UbiA prenyltransferase family PF364_13200 PF04345 Chorismate lyase PF364_13205 PF00120 Glutamine synthetase, catalytic domain PF364_13205 PF03951 Glutamine synthetase, beta-Grasp domain PF364_13210 PF00854 POT family PF364_13220 PF00117 Glutamine amidotransferase class-I PF364_13225 PF01433 Peptidase family M1 domain PF364_13225 PF11838 ERAP1-like C-terminal domain PF364_13230 PF07715 TonB-dependent Receptor Plug Domain PF364_13230 PF00593 TonB dependent receptor PF364_13235 PF02885 Glycosyl transferase family, helical bundle domain PF364_13235 PF00591 Glycosyl transferase family, a/b domain PF364_13240 PF00218 Indole-3-glycerol phosphate synthase PF364_13255 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PF364_13255 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PF364_13260 PF00111 2Fe-2S iron-sulfur cluster binding domain PF364_13260 PF01799 [2Fe-2S] binding domain PF364_13265 PF01227 GTP cyclohydrolase I PF364_13270 PF00144 Beta-lactamase PF364_13285 PF05675 Protein of unknown function (DUF817) PF364_13290 PF01208 Uroporphyrinogen decarboxylase (URO-D) PF364_13300 PF00425 chorismate binding enzyme PF364_13305 PF01648 4'-phosphopantetheinyl transferase superfamily PF364_13305 PF17837 4'-phosphopantetheinyl transferase N-terminal domain PF364_13310 PF00975 Thioesterase domain PF364_13315 PF00005 ABC transporter PF364_13320 PF00005 ABC transporter PF364_13330 PF00282 Pyridoxal-dependent decarboxylase conserved domain PF364_13335 PF00550 Phosphopantetheine attachment site PF364_13335 PF00857 Isochorismatase family PF364_13340 PF00501 AMP-binding enzyme PF364_13340 PF13193 AMP-binding enzyme C-terminal domain PF364_13345 PF00668 Condensation domain PF364_13345 PF00550 Phosphopantetheine attachment site PF364_13345 PF00501 AMP-binding enzyme PF364_13350 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PF364_13355 PF07715 TonB-dependent Receptor Plug Domain PF364_13355 PF00593 TonB dependent receptor PF364_13360 PF01497 Periplasmic binding protein PF364_13365 PF00005 ABC transporter PF364_13370 PF01032 FecCD transport family PF364_13375 PF01032 FecCD transport family PF364_13385 PF00550 Phosphopantetheine attachment site PF364_13385 PF00975 Thioesterase domain PF364_13385 PF13193 AMP-binding enzyme C-terminal domain PF364_13385 PF00501 AMP-binding enzyme PF364_13385 PF00668 Condensation domain PF364_13390 PF00501 AMP-binding enzyme PF364_13390 PF13193 AMP-binding enzyme C-terminal domain PF364_13390 PF00668 Condensation domain PF364_13390 PF00550 Phosphopantetheine attachment site PF364_13400 PF13309 HTH domain PF364_13400 PF08348 YheO-like PAS domain PF364_13405 PF00291 Pyridoxal-phosphate dependent enzyme PF364_13410 PF02678 Pirin PF364_13410 PF17954 Quercetinase C-terminal cupin domain PF364_13440 PF12852 Cupin PF364_13440 PF12833 Helix-turn-helix domain PF364_13445 PF00106 short chain dehydrogenase PF364_13450 PF00107 Zinc-binding dehydrogenase PF364_13450 PF16884 N-terminal domain of oxidoreductase PF364_13455 PF12833 Helix-turn-helix domain PF364_13455 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF364_13460 PF01370 NAD dependent epimerase/dehydratase family PF364_13470 PF00561 alpha/beta hydrolase fold PF364_13475 PF00743 Flavin-binding monooxygenase-like PF364_13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_13485 PF03466 LysR substrate binding domain PF364_13490 PF00857 Isochorismatase family PF364_13530 PF04328 Selenoprotein, putative PF364_13535 PF02554 Carbon starvation protein CstA PF364_13535 PF13722 5TM C-terminal transporter carbon starvation CstA PF364_13540 PF09285 Elongation factor P, C-terminal PF364_13540 PF08207 Elongation factor P (EF-P) KOW-like domain PF364_13540 PF01132 Elongation factor P (EF-P) OB domain PF364_13545 PF04055 Radical SAM superfamily PF364_13555 PF12792 CSS motif domain associated with EAL PF364_13555 PF00563 EAL domain PF364_13560 PF01197 Ribosomal protein L31 PF364_13565 PF13593 SBF-like CPA transporter family (DUF4137) PF364_13570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF364_13575 PF07690 Major Facilitator Superfamily PF364_13580 PF05362 Lon protease (S16) C-terminal proteolytic domain PF364_13580 PF13654 AAA domain PF364_13585 PF03466 LysR substrate binding domain PF364_13585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_13590 PF01476 LysM domain PF364_13590 PF01551 Peptidase family M23 PF364_13595 PF01975 Survival protein SurE PF364_13610 PF00768 D-alanyl-D-alanine carboxypeptidase PF364_13610 PF07943 Penicillin-binding protein 5, C-terminal domain PF364_13615 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_13620 PF13344 Haloacid dehalogenase-like hydrolase PF364_13620 PF00293 NUDIX domain PF364_13630 PF04356 Protein of unknown function (DUF489) PF364_13635 PF08328 Adenylosuccinate lyase C-terminal PF364_13635 PF00206 Lyase PF364_13650 PF01343 Peptidase family S49 PF364_13650 PF08496 Peptidase family S49 N-terminal PF364_13655 PF00005 ABC transporter PF364_13660 PF00528 Binding-protein-dependent transport system inner membrane component PF364_13665 PF00528 Binding-protein-dependent transport system inner membrane component PF364_13670 PF12849 PBP superfamily domain PF364_13675 PF00324 Amino acid permease PF364_13680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PF364_13680 PF00205 Thiamine pyrophosphate enzyme, central domain PF364_13680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PF364_13685 PF01037 Lrp/AsnC ligand binding domain PF364_13690 PF00171 Aldehyde dehydrogenase family PF364_13695 PF00282 Pyridoxal-dependent decarboxylase conserved domain PF364_13700 PF00202 Aminotransferase class-III PF364_13710 PF17754 MftR C-terminal domain PF364_13710 PF00440 Bacterial regulatory proteins, tetR family PF364_13720 PF00487 Fatty acid desaturase PF364_13725 PF00970 Oxidoreductase FAD-binding domain PF364_13725 PF00111 2Fe-2S iron-sulfur cluster binding domain PF364_13725 PF00175 Oxidoreductase NAD-binding domain PF364_13730 PF00440 Bacterial regulatory proteins, tetR family PF364_13740 PF18339 RapA N-terminal Tudor like domain 1 PF364_13740 PF18337 RapA N-terminal Tudor like domain PF364_13740 PF12137 RNA polymerase recycling family C-terminal PF364_13740 PF00176 SNF2 family N-terminal domain PF364_13740 PF00271 Helicase conserved C-terminal domain PF364_13745 PF00849 RNA pseudouridylate synthase PF364_13755 PF00202 Aminotransferase class-III PF364_13760 PF02581 Thiamine monophosphate synthase PF364_13785 PF00675 Insulinase (Peptidase family M16) PF364_13785 PF05193 Peptidase M16 inactive domain PF364_13790 PF02567 Phenazine biosynthesis-like protein PF364_13795 PF00375 Sodium:dicarboxylate symporter family PF364_13800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_13800 PF03466 LysR substrate binding domain PF364_13805 PF06779 Uncharacterised MFS-type transporter YbfB PF364_13825 PF00180 Isocitrate/isopropylmalate dehydrogenase PF364_13830 PF00849 RNA pseudouridylate synthase PF364_13835 PF03971 Monomeric isocitrate dehydrogenase PF364_13845 PF00768 D-alanyl-D-alanine carboxypeptidase PF364_13845 PF07943 Penicillin-binding protein 5, C-terminal domain PF364_13850 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_13855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PF364_13865 PF03060 Nitronate monooxygenase PF364_13870 PF01207 Dihydrouridine synthase (Dus) PF364_13875 PF07759 Protein of unknown function (DUF1615) PF364_13885 PF01472 PUA domain PF364_13885 PF00696 Amino acid kinase family PF364_13890 PF01926 50S ribosome-binding GTPase PF364_13890 PF01018 GTP1/OBG PF364_13905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PF364_13905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PF364_13910 PF00892 EamA-like transporter family PF364_13920 PF17757 UvrB interaction domain PF364_13920 PF00271 Helicase conserved C-terminal domain PF364_13920 PF04851 Type III restriction enzyme, res subunit PF364_13920 PF02151 UvrB/uvrC motif PF364_13920 PF12344 Ultra-violet resistance protein B PF364_13930 PF00990 Diguanylate cyclase, GGDEF domain PF364_13930 PF17151 Periplasmic sensor domain PF364_13940 PF00155 Aminotransferase class I and II PF364_13950 PF00012 Hsp70 protein PF364_13980 PF00106 short chain dehydrogenase PF364_13985 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) PF364_13990 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PF364_13995 PF02565 Recombination protein O C terminal PF364_13995 PF11967 Recombination protein O N terminal PF364_14005 PF07650 KH domain PF364_14005 PF01926 50S ribosome-binding GTPase PF364_14010 PF00035 Double-stranded RNA binding motif PF364_14010 PF14622 Ribonuclease-III-like PF364_14020 PF10502 Signal peptidase, peptidase S26 PF364_14025 PF03144 Elongation factor Tu domain 2 PF364_14025 PF00009 Elongation factor Tu GTP binding domain PF364_14025 PF00679 Elongation factor G C-terminus PF364_14025 PF06421 GTP-binding protein LepA C-terminus PF364_14030 PF13302 Acetyltransferase (GNAT) domain PF364_14040 PF13180 PDZ domain PF364_14045 PF02910 Fumarate reductase flavoprotein C-term PF364_14045 PF00890 FAD binding domain PF364_14055 PF02223 Thymidylate kinase PF364_14060 PF02618 YceG-like family PF364_14065 PF01063 Amino-transferase class IV PF364_14080 PF00528 Binding-protein-dependent transport system inner membrane component PF364_14085 PF00528 Binding-protein-dependent transport system inner membrane component PF364_14090 PF00005 ABC transporter PF364_14090 PF12857 TOBE-like domain PF364_14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_14095 PF03466 LysR substrate binding domain PF364_14105 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_14105 PF14602 Hexapeptide repeat of succinyl-transferase PF364_14105 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal PF364_14115 PF06508 Queuosine biosynthesis protein QueC PF364_14130 PF00578 AhpC/TSA family PF364_14140 PF01467 Cytidylyltransferase-like PF364_14140 PF00293 NUDIX domain PF364_14145 PF00378 Enoyl-CoA hydratase/isomerase PF364_14150 PF01784 NIF3 (NGG1p interacting factor 3) PF364_14160 PF07690 Major Facilitator Superfamily PF364_14165 PF02769 AIR synthase related protein, C-terminal domain PF364_14165 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PF364_14165 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PF364_14170 PF01966 HD domain PF364_14175 PF07499 RuvA, C-terminal domain PF364_14175 PF01330 RuvA N terminal domain PF364_14180 PF17864 RuvB AAA lid domain PF364_14180 PF05491 RuvB C-terminal winged helix domain PF364_14180 PF05496 Holliday junction DNA helicase RuvB P-loop domain PF364_14185 PF07687 Peptidase dimerisation domain PF364_14185 PF01546 Peptidase family M20/M25/M40 PF364_14190 PF03061 Thioesterase superfamily PF364_14195 PF01618 MotA/TolQ/ExbB proton channel family PF364_14200 PF02472 Biopolymer transport protein ExbD/TolR PF364_14210 PF07676 WD40-like Beta Propeller Repeat PF364_14210 PF04052 TolB amino-terminal domain PF364_14215 PF00691 OmpA family PF364_14225 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PF364_14230 PF00588 SpoU rRNA Methylase family PF364_14230 PF08032 RNA 2'-O ribose methyltransferase substrate binding PF364_14260 PF08299 Bacterial dnaA protein helix-turn-helix PF364_14260 PF00308 Bacterial dnaA protein PF364_14260 PF11638 DnaA N-terminal domain PF364_14265 PF01594 AI-2E family transporter PF364_14270 PF00586 AIR synthase related protein, N-terminal domain PF364_14270 PF02769 AIR synthase related protein, C-terminal domain PF364_14275 PF00551 Formyl transferase PF364_14280 PF12697 Alpha/beta hydrolase family PF364_14285 PF06965 Na+/H+ antiporter 1 PF364_14285 PF01343 Peptidase family S49 PF364_14295 PF03772 Competence protein PF364_14295 PF13567 Domain of unknown function (DUF4131) PF364_14295 PF00753 Metallo-beta-lactamase superfamily PF364_14300 PF00005 ABC transporter PF364_14305 PF02687 FtsX-like permease family PF364_14305 PF12704 MacB-like periplasmic core domain PF364_14315 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PF364_14330 PF00266 Aminotransferase class-V PF364_14340 PF13533 Biotin-lipoyl like PF364_14360 PF00535 Glycosyl transferase family 2 PF364_14375 PF03989 DNA gyrase C-terminal domain, beta-propeller PF364_14375 PF00521 DNA gyrase/topoisomerase IV, subunit A PF364_14380 PF01012 Electron transfer flavoprotein domain PF364_14380 PF00766 Electron transfer flavoprotein FAD-binding domain PF364_14385 PF01012 Electron transfer flavoprotein domain PF364_14390 PF02899 Phage integrase, N-terminal SAM-like domain PF364_14390 PF00589 Phage integrase family PF364_14395 PF01810 LysE type translocator PF364_14400 PF00561 alpha/beta hydrolase fold PF364_14405 PF01678 Diaminopimelate epimerase PF364_14410 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PF364_14410 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PF364_14420 PF00324 Amino acid permease PF364_14425 PF18073 Rubredoxin metal binding domain PF364_14435 PF00152 tRNA synthetases class II (D, K and N) PF364_14440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF364_14440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF364_14440 PF11890 Domain of unknown function (DUF3410) PF364_14445 PF06803 Protein of unknown function (DUF1232) PF364_14450 PF02634 FdhD/NarQ family PF364_14455 PF00384 Molybdopterin oxidoreductase PF364_14460 PF02595 Glycerate kinase family PF364_14475 PF00881 Nitroreductase family PF364_14500 PF09857 Putative toxin of bacterial toxin-antitoxin pair PF364_14525 PF00668 Condensation domain PF364_14525 PF00550 Phosphopantetheine attachment site PF364_14525 PF00975 Thioesterase domain PF364_14525 PF13193 AMP-binding enzyme C-terminal domain PF364_14525 PF00501 AMP-binding enzyme PF364_14540 PF01272 Transcription elongation factor, GreA/GreB, C-term PF364_14540 PF03449 Transcription elongation factor, N-terminal PF364_14545 PF00497 Bacterial extracellular solute-binding proteins, family 3 PF364_14545 PF01464 Transglycosylase SLT domain PF364_14555 PF01171 PP-loop family PF364_14560 PF01464 Transglycosylase SLT domain PF364_14565 PF01435 Peptidase family M48 PF364_14575 PF00873 AcrB/AcrD/AcrF family PF364_14580 PF03009 Glycerophosphoryl diester phosphodiesterase family PF364_14585 PF00753 Metallo-beta-lactamase superfamily PF364_14590 PF01219 Prokaryotic diacylglycerol kinase PF364_14595 PF00118 TCP-1/cpn60 chaperonin family PF364_14600 PF00166 Chaperonin 10 Kd subunit PF364_14610 PF00149 Calcineurin-like phosphoesterase PF364_14615 PF00781 Diacylglycerol kinase catalytic domain PF364_14620 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain PF364_14620 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain PF364_14625 PF01266 FAD dependent oxidoreductase PF364_14625 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PF364_14630 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PF364_14630 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PF364_14635 PF00083 Sugar (and other) transporter PF364_14650 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PF364_14650 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PF364_14665 PF09423 PhoD-like phosphatase PF364_14665 PF16655 PhoD-like phosphatase, N-terminal domain PF364_14685 PF00809 Pterin binding enzyme PF364_14690 PF17862 AAA+ lid domain PF364_14690 PF01434 Peptidase family M41 PF364_14690 PF06480 FtsH Extracellular PF364_14690 PF00004 ATPase family associated with various cellular activities (AAA) PF364_14695 PF01728 FtsJ-like methyltransferase PF364_14700 PF01985 CRS1 / YhbY (CRM) domain PF364_14715 PF00117 Glutamine amidotransferase class-I PF364_14715 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PF364_14720 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PF364_14720 PF02142 MGS-like domain PF364_14720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF364_14725 PF01272 Transcription elongation factor, GreA/GreB, C-term PF364_14725 PF03449 Transcription elongation factor, N-terminal PF364_14730 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_14735 PF00582 Universal stress protein family PF364_14740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PF364_14750 PF09587 Bacterial capsule synthesis protein PGA_cap PF364_14765 PF00999 Sodium/hydrogen exchanger family PF364_14770 PF04228 Putative neutral zinc metallopeptidase PF364_14775 PF05661 Protein of unknown function (DUF808) PF364_14780 PF00579 tRNA synthetases class I (W and Y) PF364_14785 PF00549 CoA-ligase PF364_14785 PF02629 CoA binding domain PF364_14790 PF00549 CoA-ligase PF364_14790 PF08442 ATP-grasp domain PF364_14795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF364_14795 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_14800 PF02817 e3 binding domain PF364_14800 PF00364 Biotin-requiring enzyme PF364_14800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PF364_14805 PF02779 Transketolase, pyrimidine binding domain PF364_14805 PF16078 2-oxoglutarate dehydrogenase N-terminus PF364_14805 PF00676 Dehydrogenase E1 component PF364_14805 PF16870 2-oxoglutarate dehydrogenase C-terminal PF364_14820 PF13085 2Fe-2S iron-sulfur cluster binding domain PF364_14825 PF00890 FAD binding domain PF364_14825 PF02910 Fumarate reductase flavoprotein C-term PF364_14830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PF364_14835 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PF364_14840 PF00285 Citrate synthase, C-terminal domain PF364_14850 PF00581 Rhodanese-like domain PF364_14850 PF17773 UPF0176 acylphosphatase like domain PF364_14865 PF04545 Sigma-70, region 4 PF364_14865 PF04546 Sigma-70, non-essential region PF364_14865 PF03979 Sigma-70 factor, region 1.1 PF364_14865 PF00140 Sigma-70 factor, region 1.2 PF364_14865 PF04542 Sigma-70 region 2 PF364_14865 PF04539 Sigma-70 region 3 PF364_14870 PF04359 Protein of unknown function (DUF493) PF364_14875 PF03099 Biotin/lipoate A/B protein ligase family PF364_14885 PF00465 Iron-containing alcohol dehydrogenase PF364_14890 PF13520 Amino acid permease PF364_14895 PF03358 NADPH-dependent FMN reductase PF364_14900 PF01638 HxlR-like helix-turn-helix PF364_14905 PF00588 SpoU rRNA Methylase family PF364_14910 PF10414 Sirohaem synthase dimerisation region PF364_14910 PF14824 Sirohaem biosynthesis protein central PF364_14910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PF364_14915 PF02403 Seryl-tRNA synthetase N-terminal domain PF364_14915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PF364_14925 PF03548 Outer membrane lipoprotein carrier protein LolA PF364_14930 PF01016 Ribosomal L27 protein PF364_14935 PF00829 Ribosomal prokaryotic L21 protein PF364_14945 PF00348 Polyprenyl synthetase PF364_14955 PF01569 PAP2 superfamily PF364_14960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF364_14960 PF00529 HlyD membrane-fusion protein of T1SS PF364_14965 PF00873 AcrB/AcrD/AcrF family PF364_14970 PF02321 Outer membrane efflux protein PF364_14975 PF01906 Putative heavy-metal-binding PF364_14980 PF01906 Putative heavy-metal-binding PF364_15000 PF08264 Anticodon-binding domain of tRNA PF364_15000 PF10458 Valyl tRNA synthetase tRNA binding arm PF364_15000 PF00133 tRNA synthetases class I (I, L, M and V) PF364_15020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_15020 PF03466 LysR substrate binding domain PF364_15025 PF00909 Ammonium Transporter Family PF364_15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_15040 PF00512 His Kinase A (phospho-acceptor) domain PF364_15040 PF08521 Two-component sensor kinase N-terminal PF364_15045 PF00072 Response regulator receiver domain PF364_15045 PF00486 Transcriptional regulatory protein, C terminal PF364_15050 PF08019 Phosphoethanolamine transferase EptA/EptB PF364_15050 PF00884 Sulfatase PF364_15070 PF01734 Patatin-like phospholipase PF364_15080 PF01145 SPFH domain / Band 7 family PF364_15085 PF04237 YjbR PF364_15090 PF00348 Polyprenyl synthetase PF364_15095 PF04303 PrpF protein PF364_15100 PF00324 Amino acid permease PF364_15135 PF01757 Acyltransferase family PF364_15235 PF00574 Clp protease PF364_15240 PF04860 Phage portal protein PF364_15245 PF03354 Phage Terminase PF364_15290 PF05866 Endodeoxyribonuclease RusA PF364_15310 PF00772 DnaB-like helicase N terminal domain PF364_15310 PF03796 DnaB-like helicase C terminal domain PF364_15345 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT PF364_15350 PF01726 LexA DNA binding domain PF364_15350 PF00717 Peptidase S24-like PF364_15405 PF01965 DJ-1/PfpI family PF364_15410 PF08240 Alcohol dehydrogenase GroES-like domain PF364_15410 PF00107 Zinc-binding dehydrogenase PF364_15415 PF06719 AraC-type transcriptional regulator N-terminus PF364_15415 PF12833 Helix-turn-helix domain PF364_15430 PF02673 Bacitracin resistance protein BacA PF364_15450 PF02525 Flavodoxin-like fold PF364_15465 PF01507 Phosphoadenosine phosphosulfate reductase family PF364_15470 PF06974 Protein of unknown function (DUF1298) PF364_15470 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain PF364_15480 PF10150 Ribonuclease E/G family PF364_15480 PF00575 S1 RNA binding domain PF364_15485 PF02545 Maf-like protein PF364_15490 PF04093 rod shape-determining protein MreD PF364_15495 PF04085 rod shape-determining protein MreC PF364_15505 PF02686 Glu-tRNAGln amidotransferase C subunit PF364_15510 PF01425 Amidase PF364_15515 PF02934 GatB/GatE catalytic domain PF364_15515 PF02637 GatB domain PF364_15540 PF05992 SbmA/BacA-like family PF364_15545 PF00291 Pyridoxal-phosphate dependent enzyme PF364_15545 PF13291 ACT domain PF364_15550 PF01734 Patatin-like phospholipase PF364_15575 PF00881 Nitroreductase family PF364_15580 PF07690 Major Facilitator Superfamily PF364_15585 PF12805 FUSC-like inner membrane protein yccS PF364_15595 PF00175 Oxidoreductase NAD-binding domain PF364_15595 PF00667 FAD binding domain PF364_15595 PF00258 Flavodoxin PF364_15635 PF17969 L,D-transpeptidase C-terminal domain PF364_15635 PF03734 L,D-transpeptidase catalytic domain PF364_15640 PF04304 Protein of unknown function (DUF454) PF364_15650 PF08085 Entericidin EcnA/B family PF364_15655 PF07687 Peptidase dimerisation domain PF364_15655 PF01546 Peptidase family M20/M25/M40 PF364_15670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_15670 PF01584 CheW-like domain PF364_15670 PF01627 Hpt domain PF364_15670 PF00072 Response regulator receiver domain PF364_15675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PF364_15675 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PF364_15680 PF01584 CheW-like domain PF364_15685 PF00072 Response regulator receiver domain PF364_15690 PF00072 Response regulator receiver domain PF364_15705 PF00873 AcrB/AcrD/AcrF family PF364_15710 PF03129 Anticodon binding domain PF364_15710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PF364_15710 PF04073 Aminoacyl-tRNA editing domain PF364_15715 PF07411 Domain of unknown function (DUF1508) PF364_15720 PF03831 PhnA domain PF364_15720 PF08274 PhnA Zinc-Ribbon PF364_15725 PF04343 Protein of unknown function, DUF488 PF364_15735 PF01571 Aminomethyltransferase folate-binding domain PF364_15740 PF10411 Disulfide bond isomerase protein N-terminus PF364_15740 PF13098 Thioredoxin-like domain PF364_15750 PF03547 Membrane transport protein PF364_15755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF364_15760 PF07715 TonB-dependent Receptor Plug Domain PF364_15760 PF00593 TonB dependent receptor PF364_15765 PF02245 Methylpurine-DNA glycosylase (MPG) PF364_15770 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PF364_15770 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PF364_15770 PF06827 Zinc finger found in FPG and IleRS PF364_15785 PF01741 Large-conductance mechanosensitive channel, MscL PF364_15790 PF00009 Elongation factor Tu GTP binding domain PF364_15790 PF03144 Elongation factor Tu domain 2 PF364_15790 PF00679 Elongation factor G C-terminus PF364_15795 PF00860 Permease family PF364_15805 PF00324 Amino acid permease PF364_15810 PF01139 tRNA-splicing ligase RtcB PF364_15820 PF00691 OmpA family PF364_15820 PF13505 Outer membrane protein beta-barrel domain PF364_15830 PF00108 Thiolase, N-terminal domain PF364_15830 PF02803 Thiolase, C-terminal domain PF364_15840 PF00893 Small Multidrug Resistance protein PF364_15850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PF364_15850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PF364_15855 PF01011 PQQ enzyme repeat PF364_15860 PF04966 Carbohydrate-selective porin, OprB family PF364_15865 PF02515 CoA-transferase family III PF364_15870 PF12833 Helix-turn-helix domain PF364_15870 PF02311 AraC-like ligand binding domain PF364_15875 PF00108 Thiolase, N-terminal domain PF364_15875 PF02803 Thiolase, C-terminal domain PF364_15880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF364_15880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF364_15880 PF00378 Enoyl-CoA hydratase/isomerase PF364_15905 PF03006 Haemolysin-III related PF364_15910 PF00083 Sugar (and other) transporter PF364_15910 PF07690 Major Facilitator Superfamily PF364_15920 PF01043 SecA preprotein cross-linking domain PF364_15920 PF02810 SEC-C motif PF364_15920 PF07517 SecA DEAD-like domain PF364_15920 PF07516 SecA Wing and Scaffold domain PF364_15925 PF00578 AhpC/TSA family PF364_15925 PF10417 C-terminal domain of 1-Cys peroxiredoxin PF364_15930 PF00753 Metallo-beta-lactamase superfamily PF364_15945 PF02875 Mur ligase family, glutamate ligase domain PF364_15945 PF08245 Mur ligase middle domain PF364_15950 PF01039 Carboxyl transferase domain PF364_15955 PF00290 Tryptophan synthase alpha chain PF364_15980 PF00291 Pyridoxal-phosphate dependent enzyme PF364_15985 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PF364_15990 PF07715 TonB-dependent Receptor Plug Domain PF364_15990 PF00593 TonB dependent receptor PF364_15995 PF01923 Cobalamin adenosyltransferase PF364_16000 PF03009 Glycerophosphoryl diester phosphodiesterase family PF364_16015 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PF364_16020 PF00072 Response regulator receiver domain PF364_16020 PF00486 Transcriptional regulatory protein, C terminal PF364_16025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_16025 PF00672 HAMP domain PF364_16025 PF00512 His Kinase A (phospho-acceptor) domain PF364_16035 PF12806 Acetyl-CoA dehydrogenase C-terminal like PF364_16035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_16035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_16035 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_16040 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_16040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_16040 PF12806 Acetyl-CoA dehydrogenase C-terminal like PF364_16040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_16045 PF06146 Phosphate-starvation-inducible E PF364_16065 PF00593 TonB dependent receptor PF364_16065 PF07715 TonB-dependent Receptor Plug Domain PF364_16075 PF01336 OB-fold nucleic acid binding domain PF364_16075 PF00152 tRNA synthetases class II (D, K and N) PF364_16075 PF02938 GAD domain PF364_16115 PF13439 Glycosyltransferase Family 4 PF364_16115 PF00534 Glycosyl transferases group 1 PF364_16120 PF00535 Glycosyl transferase family 2 PF364_16125 PF01522 Polysaccharide deacetylase PF364_16140 PF01063 Amino-transferase class IV PF364_16145 PF03710 Glutamate-ammonia ligase adenylyltransferase PF364_16145 PF08335 GlnD PII-uridylyltransferase PF364_16150 PF07689 KaiB domain PF364_16150 PF00512 His Kinase A (phospho-acceptor) domain PF364_16150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_16160 PF02547 Queuosine biosynthesis protein PF364_16175 PF01702 Queuine tRNA-ribosyltransferase PF364_16180 PF02699 Preprotein translocase subunit PF364_16185 PF07549 SecD/SecF GG Motif PF364_16185 PF13721 SecD export protein N-terminal TM region PF364_16185 PF02355 Protein export membrane protein PF364_16190 PF02355 Protein export membrane protein PF364_16190 PF07549 SecD/SecF GG Motif PF364_16195 PF02441 Flavoprotein PF364_16195 PF04127 DNA / pantothenate metabolism flavoprotein PF364_16200 PF04002 RadC-like JAB domain PF364_16205 PF01062 Bestrophin, RFP-TM, chloride channel PF364_16210 PF02811 PHP domain PF364_16215 PF04279 Intracellular septation protein A PF364_16220 PF03795 YCII-related domain PF364_16230 PF01266 FAD dependent oxidoreductase PF364_16230 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PF364_16240 PF04461 Protein of unknown function (DUF520) PF364_16250 PF03061 Thioesterase superfamily PF364_16255 PF00085 Thioredoxin PF364_16260 PF00561 alpha/beta hydrolase fold PF364_16265 PF04273 Putative phosphatase (DUF442) PF364_16265 PF00753 Metallo-beta-lactamase superfamily PF364_16275 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_16275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF364_16310 PF00990 Diguanylate cyclase, GGDEF domain PF364_16310 PF17152 Periplasmic sensor domain PF364_16315 PF00691 OmpA family PF364_16315 PF01389 OmpA-like transmembrane domain PF364_16320 PF00149 Calcineurin-like phosphoesterase PF364_16320 PF10518 TAT (twin-arginine translocation) pathway signal sequence PF364_16325 PF13091 PLD-like domain PF364_16335 PF16360 GTP-binding GTPase Middle Region PF364_16335 PF01926 50S ribosome-binding GTPase PF364_16335 PF13167 GTP-binding GTPase N-terminal PF364_16355 PF00149 Calcineurin-like phosphoesterase PF364_16360 PF00398 Ribosomal RNA adenine dimethylase PF364_16365 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PF364_16370 PF00572 Ribosomal protein L13 PF364_16375 PF00380 Ribosomal protein S9/S16 PF364_16380 PF00043 Glutathione S-transferase, C-terminal domain PF364_16380 PF13417 Glutathione S-transferase, N-terminal domain PF364_16385 PF04386 Stringent starvation protein B PF364_16395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF364_16395 PF00289 Biotin carboxylase, N-terminal domain PF364_16395 PF02785 Biotin carboxylase C-terminal domain PF364_16395 PF00364 Biotin-requiring enzyme PF364_16405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_16405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_16405 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_16410 PF01039 Carboxyl transferase domain PF364_16425 PF00440 Bacterial regulatory proteins, tetR family PF364_16425 PF17932 Tetracyclin repressor-like, C-terminal domain PF364_16430 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_16430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_16430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_16475 PF01066 CDP-alcohol phosphatidyltransferase PF364_16480 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PF364_16500 PF00056 lactate/malate dehydrogenase, NAD binding domain PF364_16500 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PF364_16510 PF01551 Peptidase family M23 PF364_16510 PF01464 Transglycosylase SLT domain PF364_16510 PF10145 Phage-related minor tail protein PF364_16515 PF04055 Radical SAM superfamily PF364_16515 PF01938 TRAM domain PF364_16515 PF00919 Uncharacterized protein family UPF0004 PF364_16520 PF02562 PhoH-like protein PF364_16525 PF02130 Uncharacterized protein family UPF0054 PF364_16550 PF03358 NADPH-dependent FMN reductase PF364_16555 PF03631 Virulence factor BrkB PF364_16560 PF00892 EamA-like transporter family PF364_16565 PF12833 Helix-turn-helix domain PF364_16570 PF01557 Fumarylacetoacetate (FAA) hydrolase family PF364_16615 PF08461 Ribonuclease R winged-helix domain PF364_16615 PF00575 S1 RNA binding domain PF364_16615 PF00773 RNB domain PF364_16615 PF17876 Cold shock domain PF364_16615 PF08206 Ribonuclease B OB domain PF364_16620 PF01432 Peptidase family M3 PF364_16625 PF09526 Probable metal-binding protein (DUF2387) PF364_16655 PF03937 Flavinator of succinate dehydrogenase PF364_16660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_16660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_16660 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_16665 PF00743 Flavin-binding monooxygenase-like PF364_16670 PF01196 Ribosomal protein L17 PF364_16675 PF01000 RNA polymerase Rpb3/RpoA insert domain PF364_16675 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PF364_16675 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PF364_16680 PF01479 S4 domain PF364_16680 PF00163 Ribosomal protein S4/S9 N-terminal domain PF364_16685 PF00411 Ribosomal protein S11 PF364_16690 PF00416 Ribosomal protein S13/S18 PF364_16695 PF00444 Ribosomal protein L36 PF364_16700 PF00344 SecY translocase PF364_16705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PF364_16710 PF00327 Ribosomal protein L30p/L7e PF364_16715 PF00333 Ribosomal protein S5, N-terminal domain PF364_16715 PF03719 Ribosomal protein S5, C-terminal domain PF364_16720 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PF364_16725 PF00347 Ribosomal protein L6 PF364_16730 PF00410 Ribosomal protein S8 PF364_16735 PF00253 Ribosomal protein S14p/S29e PF364_16740 PF00281 Ribosomal protein L5 PF364_16740 PF00673 ribosomal L5P family C-terminus PF364_16745 PF00467 KOW motif PF364_16745 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PF364_16750 PF00238 Ribosomal protein L14p/L23e PF364_16755 PF00366 Ribosomal protein S17 PF364_16760 PF00831 Ribosomal L29 protein PF364_16765 PF00252 Ribosomal protein L16p/L10e PF364_16775 PF00237 Ribosomal protein L22p/L17e PF364_16780 PF00203 Ribosomal protein S19 PF364_16785 PF03947 Ribosomal Proteins L2, C-terminal domain PF364_16785 PF00181 Ribosomal Proteins L2, RNA binding domain PF364_16790 PF00276 Ribosomal protein L23 PF364_16795 PF00573 Ribosomal protein L4/L1 family PF364_16800 PF00297 Ribosomal protein L3 PF364_16805 PF00338 Ribosomal protein S10p/S20e PF364_16810 PF00117 Glutamine amidotransferase class-I PF364_16815 PF01053 Cys/Met metabolism PLP-dependent enzyme PF364_16820 PF05872 Bacterial protein of unknown function (DUF853) PF364_16825 PF00175 Oxidoreductase NAD-binding domain PF364_16825 PF00970 Oxidoreductase FAD-binding domain PF364_16825 PF00042 Globin PF364_16830 PF02082 Transcriptional regulator PF364_16835 PF01926 50S ribosome-binding GTPase PF364_16845 PF00375 Sodium:dicarboxylate symporter family PF364_16855 PF01553 Acyltransferase PF364_16870 PF00270 DEAD/DEAH box helicase PF364_16870 PF00271 Helicase conserved C-terminal domain PF364_16870 PF17191 RecG wedge domain PF364_16875 PF00156 Phosphoribosyl transferase domain PF364_16880 PF00293 NUDIX domain PF364_16885 PF03641 Possible lysine decarboxylase PF364_16890 PF01544 CorA-like Mg2+ transporter protein PF364_16900 PF05494 MlaC protein PF364_16910 PF02405 Permease MlaE PF364_16915 PF00005 ABC transporter PF364_16925 PF03880 DbpA RNA binding domain PF364_16925 PF00270 DEAD/DEAH box helicase PF364_16925 PF00271 Helicase conserved C-terminal domain PF364_16925 PF12343 Cold shock protein DEAD box A PF364_16930 PF00459 Inositol monophosphatase family PF364_16935 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PF364_16935 PF02779 Transketolase, pyrimidine binding domain PF364_16935 PF02780 Transketolase, C-terminal domain PF364_16940 PF00925 GTP cyclohydrolase II PF364_16945 PF01218 Coproporphyrinogen III oxidase PF364_16950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PF364_16950 PF01488 Shikimate / quinate 5-dehydrogenase PF364_16950 PF08501 Shikimate dehydrogenase substrate binding domain PF364_16960 PF12806 Acetyl-CoA dehydrogenase C-terminal like PF364_16960 PF02770 Acyl-CoA dehydrogenase, middle domain PF364_16960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF364_16960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF364_16970 PF04024 PspC domain PF364_16975 PF00571 CBS domain PF364_17000 PF02091 Glycyl-tRNA synthetase alpha subunit PF364_17005 PF02092 Glycyl-tRNA synthetase beta subunit PF364_17005 PF05746 DALR anticodon binding domain PF364_17020 PF00892 EamA-like transporter family PF364_17025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_17025 PF03466 LysR substrate binding domain PF364_17040 PF05922 Peptidase inhibitor I9 PF364_17040 PF00082 Subtilase family PF364_17055 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family PF364_17060 PF04996 Succinylarginine dihydrolase PF364_17065 PF00171 Aldehyde dehydrogenase family PF364_17070 PF04958 Arginine N-succinyltransferase beta subunit PF364_17075 PF00202 Aminotransferase class-III PF364_17080 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PF364_17080 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PF364_17085 PF00324 Amino acid permease PF364_17095 PF08241 Methyltransferase domain PF364_17115 PF13614 AAA domain PF364_17120 PF01594 AI-2E family transporter PF364_17125 PF00080 Copper/zinc superoxide dismutase (SODC) PF364_17130 PF12805 FUSC-like inner membrane protein yccS PF364_17135 PF07690 Major Facilitator Superfamily PF364_17145 PF02525 Flavodoxin-like fold PF364_17150 PF03992 Antibiotic biosynthesis monooxygenase PF364_17160 PF01565 FAD binding domain PF364_17160 PF02913 FAD linked oxidases, C-terminal domain PF364_17165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF364_17165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF364_17170 PF00892 EamA-like transporter family PF364_17175 PF00892 EamA-like transporter family PF364_17190 PF01925 Sulfite exporter TauE/SafE PF364_17195 PF09157 Pseudouridine synthase II TruB, C-terminal PF364_17195 PF16198 tRNA pseudouridylate synthase B C-terminal domain PF364_17195 PF01509 TruB family pseudouridylate synthase (N terminal domain) PF364_17200 PF03280 Proteobacterial lipase chaperone protein PF364_17205 PF00561 alpha/beta hydrolase fold PF364_17210 PF01245 Ribosomal protein L19 PF364_17215 PF01746 tRNA (Guanine-1)-methyltransferase PF364_17220 PF05239 PRC-barrel domain PF364_17220 PF01782 RimM N-terminal domain PF364_17225 PF00886 Ribosomal protein S16 PF364_17270 PF02401 LytB protein PF364_17275 PF00625 Guanylate kinase PF364_17280 PF01192 RNA polymerase Rpb6 PF364_17290 PF13291 ACT domain PF364_17290 PF04607 Region found in RelA / SpoT proteins PF364_17290 PF02824 TGS domain PF364_17295 PF01042 Endoribonuclease L-PSP PF364_17300 PF04324 BFD-like [2Fe-2S] binding domain PF364_17305 PF00210 Ferritin-like domain PF364_17310 PF04932 O-Antigen ligase PF364_17310 PF11846 Virulence factor membrane-bound polymerase, C-terminal PF364_17310 PF15864 Protein glycosylation ligase PF364_17315 PF00114 Pilin (bacterial filament) PF364_17315 PF07963 Prokaryotic N-terminal methylation motif PF364_17325 PF04536 TPM domain PF364_17330 PF04011 LemA family PF364_17340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PF364_17340 PF07992 Pyridine nucleotide-disulphide oxidoreductase PF364_17345 PF00310 Glutamine amidotransferases class-II PF364_17345 PF04898 Glutamate synthase central domain PF364_17345 PF01645 Conserved region in glutamate synthase PF364_17345 PF01493 GXGXG motif PF364_17355 PF01761 3-dehydroquinate synthase PF364_17360 PF01202 Shikimate kinase PF364_17365 PF00263 Bacterial type II and III secretion system protein PF364_17365 PF07660 Secretin and TonB N terminus short domain PF364_17365 PF03958 Bacterial type II/III secretion system short domain PF364_17365 PF11741 AMIN domain PF364_17375 PF04350 Pilus assembly protein, PilO PF364_17380 PF05137 Fimbrial assembly protein (PilN) PF364_17385 PF11104 Type IV pilus assembly protein PilM; PF364_17390 PF17092 Penicillin-binding protein OB-like domain PF364_17390 PF00912 Transglycosylase PF364_17390 PF00905 Penicillin binding protein transpeptidase domain PF364_17395 PF13847 Methyltransferase domain PF364_17405 PF00953 Glycosyl transferase family 4 PF364_17410 PF01225 Mur ligase family, catalytic domain PF364_17410 PF02875 Mur ligase family, glutamate ligase domain PF364_17410 PF08245 Mur ligase middle domain PF364_17415 PF02875 Mur ligase family, glutamate ligase domain PF364_17415 PF08245 Mur ligase middle domain PF364_17415 PF01225 Mur ligase family, catalytic domain PF364_17420 PF03717 Penicillin-binding Protein dimerisation domain PF364_17420 PF00905 Penicillin binding protein transpeptidase domain PF364_17430 PF01795 MraW methylase family PF364_17445 PF00749 tRNA synthetases class I (E and Q), catalytic domain PF364_17460 PF00324 Amino acid permease PF364_17490 PF01545 Cation efflux family PF364_17495 PF00873 AcrB/AcrD/AcrF family PF364_17500 PF00529 HlyD membrane-fusion protein of T1SS PF364_17500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF364_17525 PF00005 ABC transporter PF364_17525 PF12848 ABC transporter PF364_17530 PF01053 Cys/Met metabolism PLP-dependent enzyme PF364_17535 PF00106 short chain dehydrogenase PF364_17540 PF01740 STAS domain PF364_17540 PF00916 Sulfate permease family PF364_17545 PF09371 Tex-like protein N-terminal domain PF364_17545 PF16921 Tex protein YqgF-like domain PF364_17545 PF17674 HHH domain PF364_17545 PF00575 S1 RNA binding domain PF364_17550 PF00072 Response regulator receiver domain PF364_17550 PF00486 Transcriptional regulatory protein, C terminal PF364_17555 PF00672 HAMP domain PF364_17555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_17555 PF00512 His Kinase A (phospho-acceptor) domain PF364_17565 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PF364_17565 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PF364_17570 PF00583 Acetyltransferase (GNAT) family PF364_17590 PF00475 Imidazoleglycerol-phosphate dehydratase PF364_17595 PF00117 Glutamine amidotransferase class-I PF364_17610 PF00977 Histidine biosynthesis protein PF364_17615 PF00664 ABC transporter transmembrane region PF364_17615 PF00005 ABC transporter PF364_17630 PF03992 Antibiotic biosynthesis monooxygenase PF364_17645 PF01636 Phosphotransferase enzyme family PF364_17650 PF00977 Histidine biosynthesis protein PF364_17665 PF00230 Major intrinsic protein PF364_17690 PF02705 K+ potassium transporter PF364_17710 PF02525 Flavodoxin-like fold PF364_17715 PF01638 HxlR-like helix-turn-helix PF364_17745 PF02311 AraC-like ligand binding domain PF364_17745 PF12833 Helix-turn-helix domain PF364_17750 PF00248 Aldo/keto reductase family PF364_17770 PF00440 Bacterial regulatory proteins, tetR family PF364_17775 PF00529 HlyD membrane-fusion protein of T1SS PF364_17775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF364_17780 PF00873 AcrB/AcrD/AcrF family PF364_17785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_17785 PF03466 LysR substrate binding domain PF364_17790 PF07690 Major Facilitator Superfamily PF364_17800 PF12833 Helix-turn-helix domain PF364_17800 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PF364_17815 PF01593 Flavin containing amine oxidoreductase PF364_17820 PF02678 Pirin PF364_17820 PF05726 Pirin C-terminal cupin domain PF364_17825 PF00857 Isochorismatase family PF364_17830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_17835 PF00171 Aldehyde dehydrogenase family PF364_17840 PF00202 Aminotransferase class-III PF364_17845 PF00155 Aminotransferase class I and II PF364_17845 PF00392 Bacterial regulatory proteins, gntR family PF364_17850 PF00324 Amino acid permease PF364_17860 PF03591 AzlC protein PF364_17885 PF03412 Peptidase C39 family PF364_17885 PF00664 ABC transporter transmembrane region PF364_17885 PF00005 ABC transporter PF364_17890 PF13533 Biotin-lipoyl like PF364_17895 PF00436 Single-strand binding protein family PF364_17900 PF07690 Major Facilitator Superfamily PF364_17910 PF02581 Thiamine monophosphate synthase PF364_17910 PF03070 TENA/THI-4/PQQC family PF364_17910 PF08543 Phosphomethylpyrimidine kinase PF364_17915 PF06942 GlpM protein PF364_17925 PF00107 Zinc-binding dehydrogenase PF364_17925 PF08240 Alcohol dehydrogenase GroES-like domain PF364_17930 PF00440 Bacterial regulatory proteins, tetR family PF364_17930 PF16925 Tetracyclin repressor-like, C-terminal domain PF364_17935 PF17760 UvrA interaction domain PF364_17935 PF17755 UvrA DNA-binding domain PF364_17935 PF00005 ABC transporter PF364_17945 PF00990 Diguanylate cyclase, GGDEF domain PF364_17955 PF02028 BCCT, betaine/carnitine/choline family transporter PF364_17965 PF00474 Sodium:solute symporter family PF364_17970 PF04341 Protein of unknown function, DUF485 PF364_17975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_17975 PF00672 HAMP domain PF364_17975 PF00072 Response regulator receiver domain PF364_17975 PF00512 His Kinase A (phospho-acceptor) domain PF364_17975 PF01627 Hpt domain PF364_17985 PF00072 Response regulator receiver domain PF364_17985 PF00196 Bacterial regulatory proteins, luxR family PF364_17990 PF03358 NADPH-dependent FMN reductase PF364_17995 PF00296 Luciferase-like monooxygenase PF364_18000 PF01037 Lrp/AsnC ligand binding domain PF364_18005 PF00857 Isochorismatase family PF364_18010 PF13193 AMP-binding enzyme C-terminal domain PF364_18010 PF16177 Acetyl-coenzyme A synthetase N-terminus PF364_18010 PF00501 AMP-binding enzyme PF364_18020 PF00924 Mechanosensitive ion channel PF364_18025 PF04452 RNA methyltransferase PF364_18030 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PF364_18035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PF364_18060 PF01368 DHH family PF364_18060 PF02272 DHHA1 domain PF364_18060 PF17768 RecJ OB domain PF364_18065 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PF364_18065 PF01243 Pyridoxamine 5'-phosphate oxidase PF364_18070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF364_18070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF364_18070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF364_18070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PF364_18075 PF00478 IMP dehydrogenase / GMP reductase domain PF364_18075 PF00571 CBS domain PF364_18080 PF03692 Putative zinc- or iron-chelating domain PF364_18085 PF00258 Flavodoxin PF364_18085 PF01613 Flavin reductase like domain PF364_18090 PF00593 TonB dependent receptor PF364_18090 PF07715 TonB-dependent Receptor Plug Domain PF364_18095 PF01169 Uncharacterized protein family UPF0016 PF364_18105 PF02817 e3 binding domain PF364_18105 PF00364 Biotin-requiring enzyme PF364_18105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PF364_18110 PF00456 Transketolase, thiamine diphosphate binding domain PF364_18110 PF17831 Pyruvate dehydrogenase E1 component middle domain PF364_18115 PF01551 Peptidase family M23 PF364_18125 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PF364_18130 PF12327 FtsZ family, C-terminal domain PF364_18130 PF00091 Tubulin/FtsZ family, GTPase domain PF364_18135 PF02491 SHS2 domain inserted in FTSA PF364_18140 PF03799 Cell division protein FtsQ PF364_18140 PF08478 POTRA domain, FtsQ-type PF364_18145 PF07478 D-ala D-ala ligase C-terminus PF364_18145 PF01820 D-ala D-ala ligase N-terminus PF364_18150 PF02875 Mur ligase family, glutamate ligase domain PF364_18150 PF08245 Mur ligase middle domain PF364_18150 PF01225 Mur ligase family, catalytic domain PF364_18155 PF04101 Glycosyltransferase family 28 C-terminal domain PF364_18155 PF03033 Glycosyltransferase family 28 N-terminal domain PF364_18160 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PF364_18160 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PF364_18170 PF07715 TonB-dependent Receptor Plug Domain PF364_18170 PF00593 TonB dependent receptor PF364_18175 PF00156 Phosphoribosyl transferase domain PF364_18180 PF03372 Endonuclease/Exonuclease/phosphatase family PF364_18185 PF03960 ArsC family PF364_18195 PF07859 alpha/beta hydrolase fold PF364_18200 PF00990 Diguanylate cyclase, GGDEF domain PF364_18200 PF07694 5TMR of 5TMR-LYT PF364_18205 PF02683 Cytochrome C biogenesis protein transmembrane region PF364_18205 PF11412 Disulphide bond corrector protein DsbC PF364_18235 PF00576 HIUase/Transthyretin family PF364_18240 PF00860 Permease family PF364_18250 PF01494 FAD binding domain PF364_18255 PF03561 Allantoicase repeat PF364_18260 PF04115 Ureidoglycolate lyase PF364_18265 PF00204 DNA gyrase B PF364_18265 PF01751 Toprim domain PF364_18265 PF00986 DNA gyrase B subunit, carboxyl terminus PF364_18265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_18270 PF05728 Uncharacterised protein family (UPF0227) PF364_18290 PF02600 Disulfide bond formation protein DsbB PF364_18295 PF04262 Glutamate-cysteine ligase PF364_18310 PF04286 Protein of unknown function (DUF445) PF364_18315 PF00155 Aminotransferase class I and II PF364_18335 PF00106 short chain dehydrogenase PF364_18345 PF00072 Response regulator receiver domain PF364_18345 PF00486 Transcriptional regulatory protein, C terminal PF364_18350 PF00512 His Kinase A (phospho-acceptor) domain PF364_18350 PF00989 PAS fold PF364_18350 PF11808 Phosphate regulon sensor protein PhoR PF364_18350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF364_18360 PF02666 Phosphatidylserine decarboxylase PF364_18365 PF00581 Rhodanese-like domain PF364_18370 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PF364_18370 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PF364_18375 PF02580 D-Tyr-tRNA(Tyr) deacylase PF364_18400 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PF364_18400 PF00925 GTP cyclohydrolase II PF364_18405 PF00885 6,7-dimethyl-8-ribityllumazine synthase PF364_18410 PF01029 NusB family PF364_18415 PF00586 AIR synthase related protein, N-terminal domain PF364_18415 PF02769 AIR synthase related protein, C-terminal domain PF364_18420 PF04608 Phosphatidylglycerophosphatase A PF364_18425 PF00132 Bacterial transferase hexapeptide (six repeats) PF364_18425 PF14602 Hexapeptide repeat of succinyl-transferase PF364_18425 PF12804 MobA-like NTP transferase domain PF364_18430 PF01380 SIS domain PF364_18435 PF01494 FAD binding domain PF364_18455 PF01810 LysE type translocator PF364_18460 PF01177 Asp/Glu/Hydantoin racemase PF364_18475 PF00491 Arginase family PF364_18480 PF01979 Amidohydrolase family PF364_18485 PF00324 Amino acid permease PF364_18490 PF00221 Aromatic amino acid lyase PF364_18495 PF01175 Urocanase Rossmann-like domain PF364_18495 PF17391 Urocanase N-terminal domain PF364_18495 PF17392 Urocanase C-terminal domain PF364_18500 PF05962 HutD PF364_18505 PF07702 UTRA domain PF364_18505 PF00392 Bacterial regulatory proteins, gntR family PF364_18515 PF07683 Cobalamin synthesis protein cobW C-terminal domain PF364_18515 PF02492 CobW/HypB/UreG, nucleotide-binding domain PF364_18525 PF00324 Amino acid permease PF364_18535 PF02798 Glutathione S-transferase, N-terminal domain PF364_18535 PF14497 Glutathione S-transferase, C-terminal domain PF364_18540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF364_18550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF364_18555 PF04463 Protein of unknown function (DUF523) PF364_18560 PF01554 MatE PF364_18565 PF01758 Sodium Bile acid symporter family PF364_18570 PF00857 Isochorismatase family PF364_18575 PF00701 Dihydrodipicolinate synthetase family PF364_18585 PF01259 SAICAR synthetase PF364_18595 PF01226 Formate/nitrite transporter PF364_18600 PF12002 MgsA AAA+ ATPase C terminal PF364_18600 PF00004 ATPase family associated with various cellular activities (AAA) PF364_18600 PF16193 AAA C-terminal domain PF364_18620 PF13954 PapC N-terminal domain PF364_18620 PF00577 Outer membrane usher protein PF364_18620 PF13953 PapC C-terminal domain PF364_18625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PF364_18625 PF02753 Pili assembly chaperone PapD, C-terminal domain PF364_18630 PF00419 Fimbrial protein PF364_18635 PF03692 Putative zinc- or iron-chelating domain PF364_18640 PF07043 Protein of unknown function (DUF1328) PF364_18655 PF14815 NUDIX domain PF364_18655 PF00730 HhH-GPD superfamily base excision DNA repair protein PF364_18655 PF00633 Helix-hairpin-helix motif PF364_18655 PF10576 Iron-sulfur binding domain of endonuclease III PF364_18670 PF03352 Methyladenine glycosylase PF364_18675 PF08240 Alcohol dehydrogenase GroES-like domain PF364_18675 PF00107 Zinc-binding dehydrogenase PF364_18680 PF00392 Bacterial regulatory proteins, gntR family PF364_18680 PF00155 Aminotransferase class I and II PF364_18695 PF03466 LysR substrate binding domain PF364_18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_18700 PF00248 Aldo/keto reductase family PF364_18705 PF07690 Major Facilitator Superfamily PF364_18715 PF01113 Dihydrodipicolinate reductase, N-terminus PF364_18715 PF05173 Dihydrodipicolinate reductase, C-terminus PF364_18725 PF00684 DnaJ central domain PF364_18725 PF01556 DnaJ C terminal domain PF364_18725 PF00226 DnaJ domain PF364_18735 PF00873 AcrB/AcrD/AcrF family PF364_18740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PF364_18745 PF00440 Bacterial regulatory proteins, tetR family PF364_18745 PF08361 MAATS-type transcriptional repressor, C-terminal region PF364_18750 PF00311 Phosphoenolpyruvate carboxylase PF364_18755 PF00860 Permease family PF364_18760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_18760 PF03466 LysR substrate binding domain PF364_18775 PF00920 Dehydratase family PF364_18780 PF00551 Formyl transferase PF364_18780 PF02911 Formyl transferase, C-terminal domain PF364_18785 PF01029 NusB family PF364_18785 PF01189 16S rRNA methyltransferase RsmB/F PF364_18795 PF00209 Sodium:neurotransmitter symporter family PF364_18835 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PF364_18840 PF07859 alpha/beta hydrolase fold PF364_18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PF364_18860 PF03466 LysR substrate binding domain PF364_18865 PF01025 GrpE PF364_18870 PF00012 Hsp70 protein PF364_18890 PF13406 Transglycosylase SLT domain PF364_18895 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PF364_18895 PF02222 ATP-grasp domain PF364_18900 PF00731 AIR carboxylase PF364_18910 PF02875 Mur ligase family, glutamate ligase domain PF364_18910 PF08245 Mur ligase middle domain PF364_18910 PF01225 Mur ligase family, catalytic domain PF364_18920 PF01569 PAP2 superfamily PF364_18925 PF03741 Integral membrane protein TerC family PF364_18935 PF03738 Glutathionylspermidine synthase preATP-grasp PF364_18940 PF00355 Rieske [2Fe-2S] domain PF364_18945 PF01979 Amidohydrolase family PF364_18950 PF00156 Phosphoribosyl transferase domain PF364_18960 PF10411 Disulfide bond isomerase protein N-terminus PF364_18960 PF13098 Thioredoxin-like domain PF364_18965 PF01545 Cation efflux family PF364_18965 PF16916 Dimerisation domain of Zinc Transporter PF364_18970 PF02583 Metal-sensitive transcriptional repressor PF364_18975 PF10396 GTP-binding protein TrmE N-terminus PF364_18975 PF01926 50S ribosome-binding GTPase PF364_18975 PF12631 MnmE helical domain PF364_18980 PF14849 YidC periplasmic domain PF364_18980 PF02096 60Kd inner membrane protein PF364_18985 PF01809 Putative membrane protein insertion efficiency factor PF364_18990 PF00825 Ribonuclease P PF364_18995 PF00468 Ribosomal protein L34 PF364_19000 PF00916 Sulfate permease family PF364_19000 PF01740 STAS domain PF364_19005 PF00582 Universal stress protein family PF364_19045 PF03389 MobA/MobL family PF364_19045 PF01443 Viral (Superfamily 1) RNA helicase PF364_19045 PF17841 BID domain of Bartonella effector protein (Bep) PF364_19085 PF07715 TonB-dependent Receptor Plug Domain PF364_19085 PF00593 TonB dependent receptor PF364_19105 PF05973 Phage derived protein Gp49-like (DUF891)