locus-tag class description M1S35_00005 PF00308 Bacterial dnaA protein M1S35_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S35_00005 PF11638 DnaA N-terminal domain M1S35_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S35_00010 PF02767 DNA polymerase III beta subunit, central domain M1S35_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S35_00015 PF02463 RecF/RecN/SMC N terminal domain M1S35_00020 PF00204 DNA gyrase B M1S35_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S35_00020 PF18053 DNA gyrase B subunit insert domain M1S35_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_00020 PF01751 Toprim domain M1S35_00030 PF09335 SNARE associated Golgi protein M1S35_00035 PF00005 ABC transporter M1S35_00035 PF12848 ABC transporter M1S35_00055 PF01521 Iron-sulphur cluster biosynthesis M1S35_00060 PF00561 alpha/beta hydrolase fold M1S35_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S35_00070 PF00579 tRNA synthetases class I (W and Y) M1S35_00110 PF00209 Sodium:neurotransmitter symporter family M1S35_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S35_00120 PF01029 NusB family M1S35_00125 PF02911 Formyl transferase, C-terminal domain M1S35_00125 PF00551 Formyl transferase M1S35_00130 PF00920 Dehydratase family M1S35_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_00145 PF03466 LysR substrate binding domain M1S35_00150 PF00860 Permease family M1S35_00155 PF00311 Phosphoenolpyruvate carboxylase M1S35_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S35_00160 PF00440 Bacterial regulatory proteins, tetR family M1S35_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S35_00170 PF00873 AcrB/AcrD/AcrF family M1S35_00180 PF00684 DnaJ central domain M1S35_00180 PF01556 DnaJ C terminal domain M1S35_00180 PF00226 DnaJ domain M1S35_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S35_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S35_00200 PF07690 Major Facilitator Superfamily M1S35_00205 PF00248 Aldo/keto reductase family M1S35_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_00210 PF03466 LysR substrate binding domain M1S35_00225 PF00155 Aminotransferase class I and II M1S35_00225 PF00392 Bacterial regulatory proteins, gntR family M1S35_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_00230 PF00107 Zinc-binding dehydrogenase M1S35_00235 PF03352 Methyladenine glycosylase M1S35_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S35_00250 PF00633 Helix-hairpin-helix motif M1S35_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S35_00250 PF14815 NUDIX domain M1S35_00265 PF07043 Protein of unknown function (DUF1328) M1S35_00270 PF03692 Putative zinc- or iron-chelating domain M1S35_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S35_00280 PF12002 MgsA AAA+ ATPase C terminal M1S35_00280 PF16193 AAA C-terminal domain M1S35_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S35_00285 PF01226 Formate/nitrite transporter M1S35_00295 PF01259 SAICAR synthetase M1S35_00305 PF00701 Dihydrodipicolinate synthetase family M1S35_00310 PF00857 Isochorismatase family M1S35_00315 PF01758 Sodium Bile acid symporter family M1S35_00320 PF01554 MatE M1S35_00325 PF04463 Protein of unknown function (DUF523) M1S35_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S35_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S35_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S35_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S35_00355 PF00324 Amino acid permease M1S35_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S35_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S35_00375 PF00392 Bacterial regulatory proteins, gntR family M1S35_00375 PF07702 UTRA domain M1S35_00380 PF05962 HutD M1S35_00385 PF01175 Urocanase Rossmann-like domain M1S35_00385 PF17392 Urocanase C-terminal domain M1S35_00385 PF17391 Urocanase N-terminal domain M1S35_00390 PF00221 Aromatic amino acid lyase M1S35_00395 PF00324 Amino acid permease M1S35_00400 PF01979 Amidohydrolase family M1S35_00405 PF00491 Arginase family M1S35_00420 PF01177 Asp/Glu/Hydantoin racemase M1S35_00425 PF01380 SIS domain M1S35_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S35_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_00430 PF12804 MobA-like NTP transferase domain M1S35_00435 PF04608 Phosphatidylglycerophosphatase A M1S35_00440 PF02769 AIR synthase related protein, C-terminal domain M1S35_00440 PF00586 AIR synthase related protein, N-terminal domain M1S35_00445 PF01029 NusB family M1S35_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S35_00455 PF00925 GTP cyclohydrolase II M1S35_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S35_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S35_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S35_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S35_00490 PF00581 Rhodanese-like domain M1S35_00495 PF02666 Phosphatidylserine decarboxylase M1S35_00500 PF03069 Acetamidase/Formamidase family M1S35_00520 PF11808 Phosphate regulon sensor protein PhoR M1S35_00520 PF00989 PAS fold M1S35_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S35_00525 PF00486 Transcriptional regulatory protein, C terminal M1S35_00525 PF00072 Response regulator receiver domain M1S35_00535 PF00106 short chain dehydrogenase M1S35_00540 PF01554 MatE M1S35_00545 PF00155 Aminotransferase class I and II M1S35_00550 PF04286 Protein of unknown function (DUF445) M1S35_00565 PF04262 Glutamate-cysteine ligase M1S35_00570 PF02600 Disulfide bond formation protein DsbB M1S35_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S35_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S35_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S35_00580 PF00877 NlpC/P60 family M1S35_00580 PF01476 LysM domain M1S35_00595 PF05728 Uncharacterised protein family (UPF0227) M1S35_00600 PF00204 DNA gyrase B M1S35_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S35_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_00600 PF01751 Toprim domain M1S35_00605 PF00106 short chain dehydrogenase M1S35_00610 PF04115 Ureidoglycolate lyase M1S35_00615 PF03561 Allantoicase repeat M1S35_00620 PF01494 FAD binding domain M1S35_00630 PF00860 Permease family M1S35_00635 PF00576 HIUase/Transthyretin family M1S35_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S35_00665 PF11412 Disulphide bond corrector protein DsbC M1S35_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S35_00670 PF07694 5TMR of 5TMR-LYT M1S35_00675 PF07859 alpha/beta hydrolase fold M1S35_00685 PF03960 ArsC family M1S35_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S35_00695 PF00156 Phosphoribosyl transferase domain M1S35_00700 PF00593 TonB dependent receptor M1S35_00700 PF07715 TonB-dependent Receptor Plug Domain M1S35_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S35_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S35_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S35_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S35_00720 PF08245 Mur ligase middle domain M1S35_00720 PF01225 Mur ligase family, catalytic domain M1S35_00720 PF02875 Mur ligase family, glutamate ligase domain M1S35_00725 PF01820 D-ala D-ala ligase N-terminus M1S35_00725 PF07478 D-ala D-ala ligase C-terminus M1S35_00730 PF08478 POTRA domain, FtsQ-type M1S35_00730 PF03799 Cell division protein FtsQ M1S35_00735 PF02491 SHS2 domain inserted in FTSA M1S35_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S35_00740 PF12327 FtsZ family, C-terminal domain M1S35_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S35_00755 PF01551 Peptidase family M23 M1S35_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S35_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S35_00765 PF02817 e3 binding domain M1S35_00765 PF00364 Biotin-requiring enzyme M1S35_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S35_00775 PF01169 Uncharacterized protein family UPF0016 M1S35_00780 PF07715 TonB-dependent Receptor Plug Domain M1S35_00780 PF00593 TonB dependent receptor M1S35_00785 PF00258 Flavodoxin M1S35_00785 PF01613 Flavin reductase like domain M1S35_00790 PF03692 Putative zinc- or iron-chelating domain M1S35_00795 PF00478 IMP dehydrogenase / GMP reductase domain M1S35_00795 PF00571 CBS domain M1S35_00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S35_00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S35_00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S35_00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S35_00805 PF01243 Pyridoxamine 5'-phosphate oxidase M1S35_00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S35_00810 PF17768 RecJ OB domain M1S35_00810 PF01368 DHH family M1S35_00810 PF02272 DHHA1 domain M1S35_00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S35_00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S35_00840 PF04452 RNA methyltransferase M1S35_00845 PF00924 Mechanosensitive ion channel M1S35_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S35_00855 PF00501 AMP-binding enzyme M1S35_00855 PF13193 AMP-binding enzyme C-terminal domain M1S35_00860 PF00857 Isochorismatase family M1S35_00865 PF01037 Lrp/AsnC ligand binding domain M1S35_00870 PF00296 Luciferase-like monooxygenase M1S35_00875 PF03358 NADPH-dependent FMN reductase M1S35_00880 PF00196 Bacterial regulatory proteins, luxR family M1S35_00880 PF00072 Response regulator receiver domain M1S35_00890 PF00672 HAMP domain M1S35_00890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_00890 PF01627 Hpt domain M1S35_00890 PF00072 Response regulator receiver domain M1S35_00890 PF00512 His Kinase A (phospho-acceptor) domain M1S35_00895 PF04341 Protein of unknown function, DUF485 M1S35_00900 PF00474 Sodium:solute symporter family M1S35_00910 PF02028 BCCT, betaine/carnitine/choline family transporter M1S35_00920 PF00990 Diguanylate cyclase, GGDEF domain M1S35_00930 PF17760 UvrA interaction domain M1S35_00930 PF17755 UvrA DNA-binding domain M1S35_00930 PF00005 ABC transporter M1S35_00935 PF00440 Bacterial regulatory proteins, tetR family M1S35_00935 PF16925 Tetracyclin repressor-like, C-terminal domain M1S35_00940 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_00940 PF00107 Zinc-binding dehydrogenase M1S35_00950 PF06942 GlpM protein M1S35_00955 PF08543 Phosphomethylpyrimidine kinase M1S35_00955 PF03070 TENA/THI-4/PQQC family M1S35_00955 PF02581 Thiamine monophosphate synthase M1S35_00965 PF07690 Major Facilitator Superfamily M1S35_00970 PF00436 Single-strand binding protein family M1S35_00980 PF03591 AzlC protein M1S35_00990 PF00324 Amino acid permease M1S35_00995 PF00155 Aminotransferase class I and II M1S35_00995 PF00392 Bacterial regulatory proteins, gntR family M1S35_01000 PF00202 Aminotransferase class-III M1S35_01005 PF00171 Aldehyde dehydrogenase family M1S35_01010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_01015 PF00857 Isochorismatase family M1S35_01020 PF02678 Pirin M1S35_01020 PF05726 Pirin C-terminal cupin domain M1S35_01025 PF01593 Flavin containing amine oxidoreductase M1S35_01045 PF07690 Major Facilitator Superfamily M1S35_01050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_01050 PF03466 LysR substrate binding domain M1S35_01070 PF00248 Aldo/keto reductase family M1S35_01075 PF02311 AraC-like ligand binding domain M1S35_01075 PF12833 Helix-turn-helix domain M1S35_01105 PF01638 HxlR-like helix-turn-helix M1S35_01110 PF02525 Flavodoxin-like fold M1S35_01130 PF02705 K+ potassium transporter M1S35_01155 PF00230 Major intrinsic protein M1S35_01170 PF00977 Histidine biosynthesis protein M1S35_01175 PF01636 Phosphotransferase enzyme family M1S35_01190 PF03992 Antibiotic biosynthesis monooxygenase M1S35_01205 PF00977 Histidine biosynthesis protein M1S35_01220 PF00117 Glutamine amidotransferase class-I M1S35_01225 PF00475 Imidazoleglycerol-phosphate dehydratase M1S35_01245 PF00583 Acetyltransferase (GNAT) family M1S35_01250 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S35_01250 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S35_01260 PF00512 His Kinase A (phospho-acceptor) domain M1S35_01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_01260 PF00672 HAMP domain M1S35_01265 PF00486 Transcriptional regulatory protein, C terminal M1S35_01265 PF00072 Response regulator receiver domain M1S35_01270 PF16921 Tex protein YqgF-like domain M1S35_01270 PF17674 HHH domain M1S35_01270 PF09371 Tex-like protein N-terminal domain M1S35_01270 PF00575 S1 RNA binding domain M1S35_01275 PF01740 STAS domain M1S35_01275 PF00916 Sulfate permease family M1S35_01280 PF00106 short chain dehydrogenase M1S35_01285 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S35_01290 PF00005 ABC transporter M1S35_01290 PF12848 ABC transporter M1S35_01315 PF04191 Phospholipid methyltransferase M1S35_01335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S35_01335 PF00529 HlyD membrane-fusion protein of T1SS M1S35_01340 PF00873 AcrB/AcrD/AcrF family M1S35_01345 PF01545 Cation efflux family M1S35_01375 PF00324 Amino acid permease M1S35_01390 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S35_01405 PF01795 MraW methylase family M1S35_01415 PF03717 Penicillin-binding Protein dimerisation domain M1S35_01415 PF00905 Penicillin binding protein transpeptidase domain M1S35_01420 PF01225 Mur ligase family, catalytic domain M1S35_01420 PF02875 Mur ligase family, glutamate ligase domain M1S35_01420 PF08245 Mur ligase middle domain M1S35_01425 PF01225 Mur ligase family, catalytic domain M1S35_01425 PF02875 Mur ligase family, glutamate ligase domain M1S35_01425 PF08245 Mur ligase middle domain M1S35_01430 PF00953 Glycosyl transferase family 4 M1S35_01440 PF13847 Methyltransferase domain M1S35_01445 PF00905 Penicillin binding protein transpeptidase domain M1S35_01445 PF00912 Transglycosylase M1S35_01445 PF17092 Penicillin-binding protein OB-like domain M1S35_01450 PF11104 Type IV pilus assembly protein PilM; M1S35_01455 PF05137 Fimbrial assembly protein (PilN) M1S35_01460 PF04350 Pilus assembly protein, PilO M1S35_01470 PF07660 Secretin and TonB N terminus short domain M1S35_01470 PF03958 Bacterial type II/III secretion system short domain M1S35_01470 PF00263 Bacterial type II and III secretion system protein M1S35_01470 PF11741 AMIN domain M1S35_01475 PF01202 Shikimate kinase M1S35_01480 PF01761 3-dehydroquinate synthase M1S35_01490 PF01493 GXGXG motif M1S35_01490 PF01645 Conserved region in glutamate synthase M1S35_01490 PF04898 Glutamate synthase central domain M1S35_01490 PF00310 Glutamine amidotransferases class-II M1S35_01495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S35_01495 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_01505 PF04011 LemA family M1S35_01510 PF04536 TPM domain M1S35_01520 PF07963 Prokaryotic N-terminal methylation motif M1S35_01520 PF00114 Pilin (bacterial filament) M1S35_01530 PF15864 Protein glycosylation ligase M1S35_01530 PF04932 O-Antigen ligase M1S35_01530 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S35_01535 PF00210 Ferritin-like domain M1S35_01540 PF04324 BFD-like [2Fe-2S] binding domain M1S35_01545 PF01042 Endoribonuclease L-PSP M1S35_01550 PF02824 TGS domain M1S35_01550 PF13291 ACT domain M1S35_01550 PF04607 Region found in RelA / SpoT proteins M1S35_01560 PF01192 RNA polymerase Rpb6 M1S35_01565 PF00625 Guanylate kinase M1S35_01570 PF02401 LytB protein M1S35_01610 PF00886 Ribosomal protein S16 M1S35_01615 PF05239 PRC-barrel domain M1S35_01615 PF01782 RimM N-terminal domain M1S35_01620 PF01746 tRNA (Guanine-1)-methyltransferase M1S35_01625 PF01245 Ribosomal protein L19 M1S35_01630 PF00561 alpha/beta hydrolase fold M1S35_01635 PF03280 Proteobacterial lipase chaperone protein M1S35_01640 PF09157 Pseudouridine synthase II TruB, C-terminal M1S35_01640 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S35_01640 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S35_01645 PF01925 Sulfite exporter TauE/SafE M1S35_01655 PF00892 EamA-like transporter family M1S35_01660 PF00892 EamA-like transporter family M1S35_01665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S35_01665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S35_01670 PF02913 FAD linked oxidases, C-terminal domain M1S35_01670 PF01565 FAD binding domain M1S35_01680 PF03992 Antibiotic biosynthesis monooxygenase M1S35_01685 PF02525 Flavodoxin-like fold M1S35_01695 PF07690 Major Facilitator Superfamily M1S35_01700 PF12805 FUSC-like inner membrane protein yccS M1S35_01705 PF00080 Copper/zinc superoxide dismutase (SODC) M1S35_01710 PF01594 AI-2E family transporter M1S35_01715 PF13614 AAA domain M1S35_01745 PF00324 Amino acid permease M1S35_01750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S35_01750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S35_01755 PF00202 Aminotransferase class-III M1S35_01760 PF04958 Arginine N-succinyltransferase beta subunit M1S35_01765 PF00171 Aldehyde dehydrogenase family M1S35_01770 PF04996 Succinylarginine dihydrolase M1S35_01775 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S35_01790 PF05922 Peptidase inhibitor I9 M1S35_01790 PF00082 Subtilase family M1S35_01805 PF03466 LysR substrate binding domain M1S35_01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_01810 PF00892 EamA-like transporter family M1S35_01820 PF05746 DALR anticodon binding domain M1S35_01820 PF02092 Glycyl-tRNA synthetase beta subunit M1S35_01825 PF02091 Glycyl-tRNA synthetase alpha subunit M1S35_01850 PF00571 CBS domain M1S35_01855 PF04024 PspC domain M1S35_01865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_01865 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S35_01865 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_01865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_01875 PF01488 Shikimate / quinate 5-dehydrogenase M1S35_01875 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S35_01875 PF08501 Shikimate dehydrogenase substrate binding domain M1S35_01880 PF01218 Coproporphyrinogen III oxidase M1S35_01885 PF00925 GTP cyclohydrolase II M1S35_01890 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S35_01890 PF02779 Transketolase, pyrimidine binding domain M1S35_01890 PF02780 Transketolase, C-terminal domain M1S35_01895 PF00459 Inositol monophosphatase family M1S35_01900 PF03880 DbpA RNA binding domain M1S35_01900 PF00270 DEAD/DEAH box helicase M1S35_01900 PF00271 Helicase conserved C-terminal domain M1S35_01900 PF12343 Cold shock protein DEAD box A M1S35_01910 PF00005 ABC transporter M1S35_01915 PF02405 Permease MlaE M1S35_01925 PF05494 MlaC protein M1S35_01935 PF01544 CorA-like Mg2+ transporter protein M1S35_01940 PF03641 Possible lysine decarboxylase M1S35_01945 PF00293 NUDIX domain M1S35_01950 PF00156 Phosphoribosyl transferase domain M1S35_01955 PF17191 RecG wedge domain M1S35_01955 PF00271 Helicase conserved C-terminal domain M1S35_01955 PF00270 DEAD/DEAH box helicase M1S35_01970 PF01553 Acyltransferase M1S35_01980 PF00375 Sodium:dicarboxylate symporter family M1S35_01990 PF01926 50S ribosome-binding GTPase M1S35_01995 PF02082 Transcriptional regulator M1S35_02000 PF00042 Globin M1S35_02000 PF00175 Oxidoreductase NAD-binding domain M1S35_02000 PF00970 Oxidoreductase FAD-binding domain M1S35_02005 PF05872 Bacterial protein of unknown function (DUF853) M1S35_02010 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S35_02015 PF00117 Glutamine amidotransferase class-I M1S35_02020 PF00338 Ribosomal protein S10p/S20e M1S35_02025 PF00297 Ribosomal protein L3 M1S35_02030 PF00573 Ribosomal protein L4/L1 family M1S35_02035 PF00276 Ribosomal protein L23 M1S35_02040 PF03947 Ribosomal Proteins L2, C-terminal domain M1S35_02040 PF00181 Ribosomal Proteins L2, RNA binding domain M1S35_02045 PF00203 Ribosomal protein S19 M1S35_02050 PF00237 Ribosomal protein L22p/L17e M1S35_02060 PF00252 Ribosomal protein L16p/L10e M1S35_02065 PF00831 Ribosomal L29 protein M1S35_02070 PF00366 Ribosomal protein S17 M1S35_02075 PF00238 Ribosomal protein L14p/L23e M1S35_02080 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S35_02080 PF00467 KOW motif M1S35_02085 PF00673 ribosomal L5P family C-terminus M1S35_02085 PF00281 Ribosomal protein L5 M1S35_02090 PF00253 Ribosomal protein S14p/S29e M1S35_02095 PF00410 Ribosomal protein S8 M1S35_02100 PF00347 Ribosomal protein L6 M1S35_02105 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S35_02110 PF03719 Ribosomal protein S5, C-terminal domain M1S35_02110 PF00333 Ribosomal protein S5, N-terminal domain M1S35_02115 PF00327 Ribosomal protein L30p/L7e M1S35_02120 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S35_02125 PF00344 SecY translocase M1S35_02130 PF00444 Ribosomal protein L36 M1S35_02135 PF00416 Ribosomal protein S13/S18 M1S35_02140 PF00411 Ribosomal protein S11 M1S35_02145 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S35_02145 PF01479 S4 domain M1S35_02150 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S35_02150 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S35_02150 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S35_02155 PF01196 Ribosomal protein L17 M1S35_02160 PF00743 Flavin-binding monooxygenase-like M1S35_02165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_02165 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_02165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_02170 PF03937 Flavinator of succinate dehydrogenase M1S35_02200 PF09526 Probable metal-binding protein (DUF2387) M1S35_02205 PF01432 Peptidase family M3 M1S35_02210 PF00575 S1 RNA binding domain M1S35_02210 PF17876 Cold shock domain M1S35_02210 PF08461 Ribonuclease R winged-helix domain M1S35_02210 PF08206 Ribonuclease B OB domain M1S35_02210 PF00773 RNB domain M1S35_02255 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S35_02260 PF12833 Helix-turn-helix domain M1S35_02265 PF00892 EamA-like transporter family M1S35_02270 PF03631 Virulence factor BrkB M1S35_02275 PF03358 NADPH-dependent FMN reductase M1S35_02300 PF02130 Uncharacterized protein family UPF0054 M1S35_02305 PF02562 PhoH-like protein M1S35_02310 PF04055 Radical SAM superfamily M1S35_02310 PF00919 Uncharacterized protein family UPF0004 M1S35_02310 PF01938 TRAM domain M1S35_02315 PF10145 Phage-related minor tail protein M1S35_02315 PF01464 Transglycosylase SLT domain M1S35_02315 PF01551 Peptidase family M23 M1S35_02325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S35_02325 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S35_02345 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S35_02350 PF01066 CDP-alcohol phosphatidyltransferase M1S35_02395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_02395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_02395 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_02400 PF17932 Tetracyclin repressor-like, C-terminal domain M1S35_02400 PF00440 Bacterial regulatory proteins, tetR family M1S35_02415 PF01039 Carboxyl transferase domain M1S35_02420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_02420 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_02420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_02430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S35_02430 PF00289 Biotin carboxylase, N-terminal domain M1S35_02430 PF00364 Biotin-requiring enzyme M1S35_02430 PF02785 Biotin carboxylase C-terminal domain M1S35_02440 PF04386 Stringent starvation protein B M1S35_02445 PF13417 Glutathione S-transferase, N-terminal domain M1S35_02445 PF00043 Glutathione S-transferase, C-terminal domain M1S35_02450 PF00380 Ribosomal protein S9/S16 M1S35_02455 PF00572 Ribosomal protein L13 M1S35_02460 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S35_02465 PF00398 Ribosomal RNA adenine dimethylase M1S35_02470 PF00149 Calcineurin-like phosphoesterase M1S35_02490 PF16360 GTP-binding GTPase Middle Region M1S35_02490 PF13167 GTP-binding GTPase N-terminal M1S35_02490 PF01926 50S ribosome-binding GTPase M1S35_02500 PF13091 PLD-like domain M1S35_02505 PF00149 Calcineurin-like phosphoesterase M1S35_02505 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S35_02510 PF01389 OmpA-like transmembrane domain M1S35_02510 PF00691 OmpA family M1S35_02515 PF17152 Periplasmic sensor domain M1S35_02515 PF00990 Diguanylate cyclase, GGDEF domain M1S35_02550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S35_02550 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_02560 PF00753 Metallo-beta-lactamase superfamily M1S35_02560 PF04273 Putative phosphatase (DUF442) M1S35_02565 PF00561 alpha/beta hydrolase fold M1S35_02570 PF00085 Thioredoxin M1S35_02575 PF03061 Thioesterase superfamily M1S35_02585 PF04461 Protein of unknown function (DUF520) M1S35_02595 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S35_02595 PF01266 FAD dependent oxidoreductase M1S35_02605 PF03795 YCII-related domain M1S35_02610 PF04279 Intracellular septation protein A M1S35_02615 PF02811 PHP domain M1S35_02620 PF01062 Bestrophin, RFP-TM, chloride channel M1S35_02625 PF04002 RadC-like JAB domain M1S35_02630 PF02441 Flavoprotein M1S35_02630 PF04127 DNA / pantothenate metabolism flavoprotein M1S35_02635 PF02355 Protein export membrane protein M1S35_02635 PF07549 SecD/SecF GG Motif M1S35_02640 PF13721 SecD export protein N-terminal TM region M1S35_02640 PF07549 SecD/SecF GG Motif M1S35_02640 PF02355 Protein export membrane protein M1S35_02645 PF02699 Preprotein translocase subunit M1S35_02650 PF01702 Queuine tRNA-ribosyltransferase M1S35_02665 PF02547 Queuosine biosynthesis protein M1S35_02695 PF00436 Single-strand binding protein family M1S35_02760 PF00717 Peptidase S24-like M1S35_02765 PF00817 impB/mucB/samB family M1S35_02765 PF11799 impB/mucB/samB family C-terminal domain M1S35_02765 PF11798 IMS family HHH motif M1S35_02765 PF13438 Domain of unknown function (DUF4113) M1S35_02850 PF01510 N-acetylmuramoyl-L-alanine amidase M1S35_02850 PF01471 Putative peptidoglycan binding domain M1S35_02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_02925 PF07689 KaiB domain M1S35_02925 PF00512 His Kinase A (phospho-acceptor) domain M1S35_02930 PF08335 GlnD PII-uridylyltransferase M1S35_02930 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S35_02935 PF01063 Amino-transferase class IV M1S35_02950 PF01522 Polysaccharide deacetylase M1S35_02955 PF00535 Glycosyl transferase family 2 M1S35_02960 PF13439 Glycosyltransferase Family 4 M1S35_02960 PF00534 Glycosyl transferases group 1 M1S35_02985 PF17101 Stealth protein CR1, conserved region 1 M1S35_02985 PF11380 Stealth protein CR2, conserved region 2 M1S35_02985 PF17102 Stealth protein CR3, conserved region 3 M1S35_02990 PF00152 tRNA synthetases class II (D, K and N) M1S35_02990 PF02938 GAD domain M1S35_02990 PF01336 OB-fold nucleic acid binding domain M1S35_03000 PF07715 TonB-dependent Receptor Plug Domain M1S35_03000 PF00593 TonB dependent receptor M1S35_03020 PF06146 Phosphate-starvation-inducible E M1S35_03025 PF02798 Glutathione S-transferase, N-terminal domain M1S35_03025 PF00043 Glutathione S-transferase, C-terminal domain M1S35_03030 PF03466 LysR substrate binding domain M1S35_03030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_03035 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S35_03035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_03035 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_03035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_03040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_03040 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S35_03040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_03040 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_03050 PF00672 HAMP domain M1S35_03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_03050 PF00512 His Kinase A (phospho-acceptor) domain M1S35_03055 PF00072 Response regulator receiver domain M1S35_03055 PF00486 Transcriptional regulatory protein, C terminal M1S35_03060 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S35_03080 PF01923 Cobalamin adenosyltransferase M1S35_03085 PF07715 TonB-dependent Receptor Plug Domain M1S35_03085 PF00593 TonB dependent receptor M1S35_03090 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S35_03095 PF00291 Pyridoxal-phosphate dependent enzyme M1S35_03120 PF00290 Tryptophan synthase alpha chain M1S35_03125 PF01039 Carboxyl transferase domain M1S35_03130 PF02875 Mur ligase family, glutamate ligase domain M1S35_03130 PF08245 Mur ligase middle domain M1S35_03145 PF00753 Metallo-beta-lactamase superfamily M1S35_03150 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S35_03150 PF00578 AhpC/TSA family M1S35_03155 PF02810 SEC-C motif M1S35_03155 PF07517 SecA DEAD-like domain M1S35_03155 PF01043 SecA preprotein cross-linking domain M1S35_03155 PF07516 SecA Wing and Scaffold domain M1S35_03165 PF07690 Major Facilitator Superfamily M1S35_03165 PF00083 Sugar (and other) transporter M1S35_03170 PF03006 Haemolysin-III related M1S35_03195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S35_03195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S35_03195 PF00378 Enoyl-CoA hydratase/isomerase M1S35_03200 PF00108 Thiolase, N-terminal domain M1S35_03200 PF02803 Thiolase, C-terminal domain M1S35_03205 PF12833 Helix-turn-helix domain M1S35_03205 PF02311 AraC-like ligand binding domain M1S35_03210 PF02515 CoA-transferase family III M1S35_03215 PF04966 Carbohydrate-selective porin, OprB family M1S35_03220 PF01011 PQQ enzyme repeat M1S35_03225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S35_03225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S35_03235 PF00893 Small Multidrug Resistance protein M1S35_03245 PF02803 Thiolase, C-terminal domain M1S35_03245 PF00108 Thiolase, N-terminal domain M1S35_03255 PF13505 Outer membrane protein beta-barrel domain M1S35_03255 PF00691 OmpA family M1S35_03265 PF01139 tRNA-splicing ligase RtcB M1S35_03270 PF00324 Amino acid permease M1S35_03275 PF05175 Methyltransferase small domain M1S35_03275 PF08468 Methyltransferase small domain N-terminal M1S35_03280 PF00860 Permease family M1S35_03285 PF03144 Elongation factor Tu domain 2 M1S35_03285 PF00009 Elongation factor Tu GTP binding domain M1S35_03285 PF00679 Elongation factor G C-terminus M1S35_03290 PF01741 Large-conductance mechanosensitive channel, MscL M1S35_03305 PF06827 Zinc finger found in FPG and IleRS M1S35_03305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S35_03305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S35_03310 PF02245 Methylpurine-DNA glycosylase (MPG) M1S35_03330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S35_03345 PF13098 Thioredoxin-like domain M1S35_03345 PF10411 Disulfide bond isomerase protein N-terminus M1S35_03350 PF01571 Aminomethyltransferase folate-binding domain M1S35_03360 PF04343 Protein of unknown function, DUF488 M1S35_03365 PF03831 PhnA domain M1S35_03365 PF08274 PhnA Zinc-Ribbon M1S35_03370 PF07411 Domain of unknown function (DUF1508) M1S35_03375 PF03129 Anticodon binding domain M1S35_03375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S35_03375 PF04073 Aminoacyl-tRNA editing domain M1S35_03380 PF00873 AcrB/AcrD/AcrF family M1S35_03395 PF00072 Response regulator receiver domain M1S35_03400 PF00072 Response regulator receiver domain M1S35_03405 PF01584 CheW-like domain M1S35_03410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S35_03410 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S35_03415 PF01584 CheW-like domain M1S35_03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_03415 PF00072 Response regulator receiver domain M1S35_03415 PF01627 Hpt domain M1S35_03425 PF07687 Peptidase dimerisation domain M1S35_03425 PF01546 Peptidase family M20/M25/M40 M1S35_03430 PF08085 Entericidin EcnA/B family M1S35_03440 PF04304 Protein of unknown function (DUF454) M1S35_03445 PF17969 L,D-transpeptidase C-terminal domain M1S35_03445 PF03734 L,D-transpeptidase catalytic domain M1S35_03485 PF00667 FAD binding domain M1S35_03485 PF00258 Flavodoxin M1S35_03485 PF00175 Oxidoreductase NAD-binding domain M1S35_03495 PF12805 FUSC-like inner membrane protein yccS M1S35_03500 PF07690 Major Facilitator Superfamily M1S35_03505 PF00881 Nitroreductase family M1S35_03520 PF01235 Sodium:alanine symporter family M1S35_03525 PF01734 Patatin-like phospholipase M1S35_03530 PF00291 Pyridoxal-phosphate dependent enzyme M1S35_03530 PF13291 ACT domain M1S35_03535 PF05992 SbmA/BacA-like family M1S35_03565 PF02934 GatB/GatE catalytic domain M1S35_03565 PF02637 GatB domain M1S35_03570 PF01425 Amidase M1S35_03575 PF02686 Glu-tRNAGln amidotransferase C subunit M1S35_03585 PF04085 rod shape-determining protein MreC M1S35_03590 PF04093 rod shape-determining protein MreD M1S35_03595 PF02545 Maf-like protein M1S35_03600 PF10150 Ribonuclease E/G family M1S35_03600 PF00575 S1 RNA binding domain M1S35_03610 PF06974 Protein of unknown function (DUF1298) M1S35_03610 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S35_03615 PF01507 Phosphoadenosine phosphosulfate reductase family M1S35_03630 PF02525 Flavodoxin-like fold M1S35_03650 PF02673 Bacitracin resistance protein BacA M1S35_03655 PF06719 AraC-type transcriptional regulator N-terminus M1S35_03655 PF12833 Helix-turn-helix domain M1S35_03660 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_03660 PF08990 Erythronolide synthase docking M1S35_03660 PF09277 Erythronolide synthase, docking M1S35_03660 PF16197 Ketoacyl-synthetase C-terminal extension M1S35_03660 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S35_03660 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S35_03660 PF08659 KR domain M1S35_03660 PF00550 Phosphopantetheine attachment site M1S35_03660 PF14765 Polyketide synthase dehydratase M1S35_03660 PF00698 Acyl transferase domain M1S35_03665 PF01965 DJ-1/PfpI family M1S35_03675 PF00324 Amino acid permease M1S35_03680 PF04303 PrpF protein M1S35_03685 PF00348 Polyprenyl synthetase M1S35_03690 PF04237 YjbR M1S35_03695 PF01145 SPFH domain / Band 7 family M1S35_03705 PF01734 Patatin-like phospholipase M1S35_03725 PF08019 Phosphoethanolamine transferase EptA/EptB M1S35_03725 PF00884 Sulfatase M1S35_03730 PF00072 Response regulator receiver domain M1S35_03730 PF00486 Transcriptional regulatory protein, C terminal M1S35_03735 PF08521 Two-component sensor kinase N-terminal M1S35_03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_03735 PF00512 His Kinase A (phospho-acceptor) domain M1S35_03745 PF00909 Ammonium Transporter Family M1S35_03750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_03750 PF03466 LysR substrate binding domain M1S35_03770 PF00133 tRNA synthetases class I (I, L, M and V) M1S35_03770 PF10458 Valyl tRNA synthetase tRNA binding arm M1S35_03770 PF08264 Anticodon-binding domain of tRNA M1S35_03790 PF01906 Putative heavy-metal-binding M1S35_03795 PF01906 Putative heavy-metal-binding M1S35_03800 PF02321 Outer membrane efflux protein M1S35_03805 PF00873 AcrB/AcrD/AcrF family M1S35_03810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S35_03810 PF00529 HlyD membrane-fusion protein of T1SS M1S35_03815 PF01569 PAP2 superfamily M1S35_03825 PF00348 Polyprenyl synthetase M1S35_03835 PF00829 Ribosomal prokaryotic L21 protein M1S35_03840 PF01016 Ribosomal L27 protein M1S35_03845 PF03548 Outer membrane lipoprotein carrier protein LolA M1S35_03855 PF02403 Seryl-tRNA synthetase N-terminal domain M1S35_03855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S35_03860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S35_03860 PF10414 Sirohaem synthase dimerisation region M1S35_03860 PF14824 Sirohaem biosynthesis protein central M1S35_03865 PF00588 SpoU rRNA Methylase family M1S35_03870 PF01638 HxlR-like helix-turn-helix M1S35_03875 PF03358 NADPH-dependent FMN reductase M1S35_03880 PF13520 Amino acid permease M1S35_03885 PF00465 Iron-containing alcohol dehydrogenase M1S35_03895 PF03099 Biotin/lipoate A/B protein ligase family M1S35_03900 PF04359 Protein of unknown function (DUF493) M1S35_03905 PF04545 Sigma-70, region 4 M1S35_03905 PF04542 Sigma-70 region 2 M1S35_03905 PF04539 Sigma-70 region 3 M1S35_03905 PF00140 Sigma-70 factor, region 1.2 M1S35_03905 PF03979 Sigma-70 factor, region 1.1 M1S35_03905 PF04546 Sigma-70, non-essential region M1S35_03925 PF00581 Rhodanese-like domain M1S35_03925 PF17773 UPF0176 acylphosphatase like domain M1S35_03935 PF00285 Citrate synthase, C-terminal domain M1S35_03940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S35_03945 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S35_03950 PF00890 FAD binding domain M1S35_03950 PF02910 Fumarate reductase flavoprotein C-term M1S35_03955 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S35_03970 PF02779 Transketolase, pyrimidine binding domain M1S35_03970 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S35_03970 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S35_03970 PF00676 Dehydrogenase E1 component M1S35_03975 PF00364 Biotin-requiring enzyme M1S35_03975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S35_03975 PF02817 e3 binding domain M1S35_03980 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_03980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S35_03985 PF00549 CoA-ligase M1S35_03985 PF08442 ATP-grasp domain M1S35_03990 PF00549 CoA-ligase M1S35_03990 PF02629 CoA binding domain M1S35_03995 PF00579 tRNA synthetases class I (W and Y) M1S35_04000 PF05661 Protein of unknown function (DUF808) M1S35_04005 PF04228 Putative neutral zinc metallopeptidase M1S35_04010 PF00999 Sodium/hydrogen exchanger family M1S35_04025 PF09587 Bacterial capsule synthesis protein PGA_cap M1S35_04035 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S35_04040 PF00582 Universal stress protein family M1S35_04045 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_04050 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S35_04050 PF03449 Transcription elongation factor, N-terminal M1S35_04055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S35_04055 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S35_04055 PF02142 MGS-like domain M1S35_04060 PF00117 Glutamine amidotransferase class-I M1S35_04060 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S35_04075 PF01985 CRS1 / YhbY (CRM) domain M1S35_04080 PF01728 FtsJ-like methyltransferase M1S35_04085 PF00004 ATPase family associated with various cellular activities (AAA) M1S35_04085 PF06480 FtsH Extracellular M1S35_04085 PF01434 Peptidase family M41 M1S35_04085 PF17862 AAA+ lid domain M1S35_04090 PF00809 Pterin binding enzyme M1S35_04110 PF16655 PhoD-like phosphatase, N-terminal domain M1S35_04110 PF09423 PhoD-like phosphatase M1S35_04125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S35_04125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S35_04140 PF00083 Sugar (and other) transporter M1S35_04145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S35_04145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S35_04150 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S35_04150 PF01266 FAD dependent oxidoreductase M1S35_04155 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S35_04155 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S35_04160 PF00781 Diacylglycerol kinase catalytic domain M1S35_04165 PF00149 Calcineurin-like phosphoesterase M1S35_04175 PF00166 Chaperonin 10 Kd subunit M1S35_04180 PF00118 TCP-1/cpn60 chaperonin family M1S35_04185 PF01219 Prokaryotic diacylglycerol kinase M1S35_04190 PF00753 Metallo-beta-lactamase superfamily M1S35_04195 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S35_04200 PF00873 AcrB/AcrD/AcrF family M1S35_04210 PF01435 Peptidase family M48 M1S35_04215 PF01464 Transglycosylase SLT domain M1S35_04220 PF01171 PP-loop family M1S35_04230 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S35_04230 PF01464 Transglycosylase SLT domain M1S35_04235 PF03449 Transcription elongation factor, N-terminal M1S35_04235 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S35_04250 PF00550 Phosphopantetheine attachment site M1S35_04250 PF00501 AMP-binding enzyme M1S35_04250 PF13193 AMP-binding enzyme C-terminal domain M1S35_04250 PF00668 Condensation domain M1S35_04250 PF00975 Thioesterase domain M1S35_04280 PF00881 Nitroreductase family M1S35_04295 PF02595 Glycerate kinase family M1S35_04300 PF00384 Molybdopterin oxidoreductase M1S35_04305 PF02634 FdhD/NarQ family M1S35_04310 PF06803 Protein of unknown function (DUF1232) M1S35_04315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S35_04315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S35_04315 PF11890 Domain of unknown function (DUF3410) M1S35_04320 PF00152 tRNA synthetases class II (D, K and N) M1S35_04330 PF18073 Rubredoxin metal binding domain M1S35_04335 PF00324 Amino acid permease M1S35_04345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S35_04345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S35_04350 PF01678 Diaminopimelate epimerase M1S35_04355 PF01810 LysE type translocator M1S35_04360 PF00589 Phage integrase family M1S35_04360 PF02899 Phage integrase, N-terminal SAM-like domain M1S35_04365 PF01012 Electron transfer flavoprotein domain M1S35_04370 PF01012 Electron transfer flavoprotein domain M1S35_04370 PF00766 Electron transfer flavoprotein FAD-binding domain M1S35_04375 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S35_04375 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S35_04390 PF00535 Glycosyl transferase family 2 M1S35_04410 PF13533 Biotin-lipoyl like M1S35_04420 PF00266 Aminotransferase class-V M1S35_04435 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S35_04445 PF12704 MacB-like periplasmic core domain M1S35_04445 PF02687 FtsX-like permease family M1S35_04450 PF00005 ABC transporter M1S35_04455 PF13567 Domain of unknown function (DUF4131) M1S35_04455 PF03772 Competence protein M1S35_04455 PF00753 Metallo-beta-lactamase superfamily M1S35_04465 PF06965 Na+/H+ antiporter 1 M1S35_04465 PF01343 Peptidase family S49 M1S35_04470 PF12697 Alpha/beta hydrolase family M1S35_04475 PF00551 Formyl transferase M1S35_04480 PF00586 AIR synthase related protein, N-terminal domain M1S35_04480 PF02769 AIR synthase related protein, C-terminal domain M1S35_04485 PF01594 AI-2E family transporter M1S35_04490 PF00308 Bacterial dnaA protein M1S35_04490 PF08299 Bacterial dnaA protein helix-turn-helix M1S35_04490 PF11638 DnaA N-terminal domain M1S35_04520 PF00588 SpoU rRNA Methylase family M1S35_04520 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S35_04525 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S35_04535 PF00691 OmpA family M1S35_04540 PF07676 WD40-like Beta Propeller Repeat M1S35_04540 PF04052 TolB amino-terminal domain M1S35_04550 PF02472 Biopolymer transport protein ExbD/TolR M1S35_04555 PF01618 MotA/TolQ/ExbB proton channel family M1S35_04560 PF03061 Thioesterase superfamily M1S35_04565 PF07687 Peptidase dimerisation domain M1S35_04565 PF01546 Peptidase family M20/M25/M40 M1S35_04570 PF17864 RuvB AAA lid domain M1S35_04570 PF05491 RuvB C-terminal winged helix domain M1S35_04570 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S35_04575 PF07499 RuvA, C-terminal domain M1S35_04575 PF01330 RuvA N terminal domain M1S35_04580 PF01966 HD domain M1S35_04585 PF02769 AIR synthase related protein, C-terminal domain M1S35_04585 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S35_04585 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S35_04590 PF07690 Major Facilitator Superfamily M1S35_04595 PF01784 NIF3 (NGG1p interacting factor 3) M1S35_04600 PF00378 Enoyl-CoA hydratase/isomerase M1S35_04605 PF00293 NUDIX domain M1S35_04605 PF01467 Cytidylyltransferase-like M1S35_04615 PF00578 AhpC/TSA family M1S35_04630 PF06508 Queuosine biosynthesis protein QueC M1S35_04640 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S35_04640 PF14602 Hexapeptide repeat of succinyl-transferase M1S35_04640 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_04650 PF03466 LysR substrate binding domain M1S35_04650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_04655 PF00005 ABC transporter M1S35_04655 PF12857 TOBE-like domain M1S35_04660 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_04665 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_04680 PF01063 Amino-transferase class IV M1S35_04685 PF02618 YceG-like family M1S35_04690 PF02223 Thymidylate kinase M1S35_04700 PF00890 FAD binding domain M1S35_04700 PF02910 Fumarate reductase flavoprotein C-term M1S35_04705 PF13180 PDZ domain M1S35_04715 PF00009 Elongation factor Tu GTP binding domain M1S35_04715 PF06421 GTP-binding protein LepA C-terminus M1S35_04715 PF00679 Elongation factor G C-terminus M1S35_04715 PF03144 Elongation factor Tu domain 2 M1S35_04720 PF10502 Signal peptidase, peptidase S26 M1S35_04730 PF00035 Double-stranded RNA binding motif M1S35_04730 PF14622 Ribonuclease-III-like M1S35_04735 PF01926 50S ribosome-binding GTPase M1S35_04735 PF07650 KH domain M1S35_04745 PF11967 Recombination protein O N terminal M1S35_04745 PF02565 Recombination protein O C terminal M1S35_04750 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S35_04755 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S35_04760 PF00106 short chain dehydrogenase M1S35_04790 PF00155 Aminotransferase class I and II M1S35_04800 PF17151 Periplasmic sensor domain M1S35_04800 PF00990 Diguanylate cyclase, GGDEF domain M1S35_04810 PF04851 Type III restriction enzyme, res subunit M1S35_04810 PF02151 UvrB/uvrC motif M1S35_04810 PF12344 Ultra-violet resistance protein B M1S35_04810 PF17757 UvrB interaction domain M1S35_04810 PF00271 Helicase conserved C-terminal domain M1S35_04820 PF00892 EamA-like transporter family M1S35_04825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S35_04825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S35_04840 PF01926 50S ribosome-binding GTPase M1S35_04840 PF01018 GTP1/OBG M1S35_04845 PF01472 PUA domain M1S35_04845 PF00696 Amino acid kinase family M1S35_04855 PF07759 Protein of unknown function (DUF1615) M1S35_04860 PF01207 Dihydrouridine synthase (Dus) M1S35_04865 PF03060 Nitronate monooxygenase M1S35_04880 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S35_04910 PF00875 DNA photolyase M1S35_04910 PF03441 FAD binding domain of DNA photolyase M1S35_04915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S35_04920 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_04925 PF07943 Penicillin-binding protein 5, C-terminal domain M1S35_04925 PF00768 D-alanyl-D-alanine carboxypeptidase M1S35_04935 PF03971 Monomeric isocitrate dehydrogenase M1S35_04940 PF00849 RNA pseudouridylate synthase M1S35_04945 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S35_04965 PF06779 Uncharacterised MFS-type transporter YbfB M1S35_04970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_04970 PF03466 LysR substrate binding domain M1S35_04975 PF00375 Sodium:dicarboxylate symporter family M1S35_04980 PF02567 Phenazine biosynthesis-like protein M1S35_04985 PF00675 Insulinase (Peptidase family M16) M1S35_04985 PF05193 Peptidase M16 inactive domain M1S35_05010 PF02581 Thiamine monophosphate synthase M1S35_05015 PF00202 Aminotransferase class-III M1S35_05025 PF00849 RNA pseudouridylate synthase M1S35_05030 PF00271 Helicase conserved C-terminal domain M1S35_05030 PF18339 RapA N-terminal Tudor like domain 1 M1S35_05030 PF18337 RapA N-terminal Tudor like domain M1S35_05030 PF12137 RNA polymerase recycling family C-terminal M1S35_05030 PF00176 SNF2 family N-terminal domain M1S35_05040 PF00440 Bacterial regulatory proteins, tetR family M1S35_05045 PF00970 Oxidoreductase FAD-binding domain M1S35_05045 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S35_05045 PF00175 Oxidoreductase NAD-binding domain M1S35_05050 PF00487 Fatty acid desaturase M1S35_05060 PF17754 MftR C-terminal domain M1S35_05060 PF00440 Bacterial regulatory proteins, tetR family M1S35_05070 PF00202 Aminotransferase class-III M1S35_05075 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S35_05080 PF00171 Aldehyde dehydrogenase family M1S35_05085 PF01037 Lrp/AsnC ligand binding domain M1S35_05090 PF00205 Thiamine pyrophosphate enzyme, central domain M1S35_05090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S35_05090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S35_05095 PF00324 Amino acid permease M1S35_05100 PF12849 PBP superfamily domain M1S35_05105 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_05110 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_05115 PF00005 ABC transporter M1S35_05120 PF01343 Peptidase family S49 M1S35_05120 PF08496 Peptidase family S49 N-terminal M1S35_05135 PF00206 Lyase M1S35_05135 PF08328 Adenylosuccinate lyase C-terminal M1S35_05140 PF04356 Protein of unknown function (DUF489) M1S35_05150 PF13344 Haloacid dehalogenase-like hydrolase M1S35_05150 PF00293 NUDIX domain M1S35_05155 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_05160 PF07943 Penicillin-binding protein 5, C-terminal domain M1S35_05160 PF00768 D-alanyl-D-alanine carboxypeptidase M1S35_05175 PF01975 Survival protein SurE M1S35_05180 PF01476 LysM domain M1S35_05180 PF01551 Peptidase family M23 M1S35_05185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_05185 PF03466 LysR substrate binding domain M1S35_05190 PF13654 AAA domain M1S35_05190 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S35_05195 PF07690 Major Facilitator Superfamily M1S35_05200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S35_05205 PF13593 SBF-like CPA transporter family (DUF4137) M1S35_05210 PF01197 Ribosomal protein L31 M1S35_05225 PF04055 Radical SAM superfamily M1S35_05230 PF01132 Elongation factor P (EF-P) OB domain M1S35_05230 PF08207 Elongation factor P (EF-P) KOW-like domain M1S35_05230 PF09285 Elongation factor P, C-terminal M1S35_05235 PF02554 Carbon starvation protein CstA M1S35_05235 PF13722 5TM C-terminal transporter carbon starvation CstA M1S35_05240 PF04328 Selenoprotein, putative M1S35_05275 PF06018 CodY GAF-like domain M1S35_05275 PF17853 GGDEF-like domain M1S35_05275 PF13556 PucR C-terminal helix-turn-helix domain M1S35_05290 PF00171 Aldehyde dehydrogenase family M1S35_05295 PF00324 Amino acid permease M1S35_05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_05300 PF03466 LysR substrate binding domain M1S35_05305 PF02028 BCCT, betaine/carnitine/choline family transporter M1S35_05310 PF02028 BCCT, betaine/carnitine/choline family transporter M1S35_05315 PF00355 Rieske [2Fe-2S] domain M1S35_05315 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S35_05320 PF00171 Aldehyde dehydrogenase family M1S35_05330 PF18113 Rubredoxin binding C-terminal domain M1S35_05330 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_05335 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S35_05335 PF01266 FAD dependent oxidoreductase M1S35_05355 PF00892 EamA-like transporter family M1S35_05365 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S35_05370 PF00083 Sugar (and other) transporter M1S35_05375 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S35_05375 PF13378 Enolase C-terminal domain-like M1S35_05380 PF09277 Erythronolide synthase, docking M1S35_05380 PF16197 Ketoacyl-synthetase C-terminal extension M1S35_05380 PF14765 Polyketide synthase dehydratase M1S35_05380 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_05380 PF08990 Erythronolide synthase docking M1S35_05380 PF08659 KR domain M1S35_05380 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S35_05380 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S35_05380 PF00698 Acyl transferase domain M1S35_05380 PF00550 Phosphopantetheine attachment site M1S35_05385 PF00440 Bacterial regulatory proteins, tetR family M1S35_05405 PF02678 Pirin M1S35_05405 PF17954 Quercetinase C-terminal cupin domain M1S35_05415 PF13309 HTH domain M1S35_05415 PF08348 YheO-like PAS domain M1S35_05425 PF00501 AMP-binding enzyme M1S35_05425 PF13193 AMP-binding enzyme C-terminal domain M1S35_05425 PF00550 Phosphopantetheine attachment site M1S35_05425 PF00668 Condensation domain M1S35_05430 PF00975 Thioesterase domain M1S35_05430 PF00550 Phosphopantetheine attachment site M1S35_05430 PF00668 Condensation domain M1S35_05430 PF13193 AMP-binding enzyme C-terminal domain M1S35_05430 PF00501 AMP-binding enzyme M1S35_05435 PF01032 FecCD transport family M1S35_05440 PF01032 FecCD transport family M1S35_05445 PF00005 ABC transporter M1S35_05450 PF01497 Periplasmic binding protein M1S35_05455 PF07715 TonB-dependent Receptor Plug Domain M1S35_05455 PF00593 TonB dependent receptor M1S35_05460 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S35_05465 PF00501 AMP-binding enzyme M1S35_05465 PF00550 Phosphopantetheine attachment site M1S35_05465 PF00668 Condensation domain M1S35_05470 PF00501 AMP-binding enzyme M1S35_05470 PF13193 AMP-binding enzyme C-terminal domain M1S35_05475 PF00857 Isochorismatase family M1S35_05475 PF00550 Phosphopantetheine attachment site M1S35_05480 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S35_05490 PF00005 ABC transporter M1S35_05495 PF00005 ABC transporter M1S35_05500 PF00975 Thioesterase domain M1S35_05510 PF00425 chorismate binding enzyme M1S35_05520 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S35_05525 PF05675 Protein of unknown function (DUF817) M1S35_05540 PF00144 Beta-lactamase M1S35_05550 PF01227 GTP cyclohydrolase I M1S35_05555 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S35_05555 PF01799 [2Fe-2S] binding domain M1S35_05560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S35_05560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S35_05575 PF00218 Indole-3-glycerol phosphate synthase M1S35_05580 PF00591 Glycosyl transferase family, a/b domain M1S35_05580 PF02885 Glycosyl transferase family, helical bundle domain M1S35_05585 PF00593 TonB dependent receptor M1S35_05585 PF07715 TonB-dependent Receptor Plug Domain M1S35_05590 PF11838 ERAP1-like C-terminal domain M1S35_05590 PF01433 Peptidase family M1 domain M1S35_05595 PF00117 Glutamine amidotransferase class-I M1S35_05605 PF00854 POT family M1S35_05610 PF00120 Glutamine synthetase, catalytic domain M1S35_05610 PF03951 Glutamine synthetase, beta-Grasp domain M1S35_05615 PF04345 Chorismate lyase M1S35_05620 PF01040 UbiA prenyltransferase family M1S35_05655 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S35_05655 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S35_05660 PF01784 NIF3 (NGG1p interacting factor 3) M1S35_05665 PF13180 PDZ domain M1S35_05670 PF01743 Poly A polymerase head domain M1S35_05670 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S35_05675 PF03949 Malic enzyme, NAD binding domain M1S35_05675 PF01515 Phosphate acetyl/butaryl transferase M1S35_05675 PF00390 Malic enzyme, N-terminal domain M1S35_05680 PF00563 EAL domain M1S35_05680 PF00990 Diguanylate cyclase, GGDEF domain M1S35_05680 PF03707 Bacterial signalling protein N terminal repeat M1S35_05685 PF04452 RNA methyltransferase M1S35_05690 PF02219 Methylenetetrahydrofolate reductase M1S35_05695 PF05221 S-adenosyl-L-homocysteine hydrolase M1S35_05695 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S35_05710 PF09317 Domain of unknown function (DUF1974) M1S35_05710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_05710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_05715 PF04055 Radical SAM superfamily M1S35_05720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S35_05720 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_05730 PF07690 Major Facilitator Superfamily M1S35_05740 PF00557 Metallopeptidase family M24 M1S35_05745 PF00318 Ribosomal protein S2 M1S35_05750 PF00889 Elongation factor TS M1S35_05760 PF12833 Helix-turn-helix domain M1S35_05780 PF03330 Lytic transglycolase M1S35_05780 PF05036 Sporulation related domain M1S35_05785 PF13406 Transglycosylase SLT domain M1S35_05790 PF01098 Cell cycle protein M1S35_05800 PF14489 QueF-like protein M1S35_05800 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S35_05805 PF01061 ABC-2 type transporter M1S35_05810 PF00005 ABC transporter M1S35_05840 PF00464 Serine hydroxymethyltransferase M1S35_05845 PF02321 Outer membrane efflux protein M1S35_05850 PF00873 AcrB/AcrD/AcrF family M1S35_05855 PF13533 Biotin-lipoyl like M1S35_05860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_05860 PF03466 LysR substrate binding domain M1S35_05865 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S35_05870 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_05875 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_05880 PF00005 ABC transporter M1S35_05885 PF00893 Small Multidrug Resistance protein M1S35_05890 PF00037 4Fe-4S binding domain M1S35_05895 PF01136 Peptidase family U32 M1S35_05895 PF16325 Peptidase family U32 C-terminal domain M1S35_05900 PF00392 Bacterial regulatory proteins, gntR family M1S35_05900 PF00155 Aminotransferase class I and II M1S35_05905 PF02567 Phenazine biosynthesis-like protein M1S35_05910 PF00970 Oxidoreductase FAD-binding domain M1S35_05910 PF00175 Oxidoreductase NAD-binding domain M1S35_05915 PF01980 tRNA-methyltransferase O M1S35_05915 PF18389 TrmO C-terminal domain M1S35_05925 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S35_05925 PF00437 Type II/IV secretion system protein M1S35_05935 PF00486 Transcriptional regulatory protein, C terminal M1S35_05935 PF00072 Response regulator receiver domain M1S35_05940 PF08521 Two-component sensor kinase N-terminal M1S35_05940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_05940 PF00512 His Kinase A (phospho-acceptor) domain M1S35_05950 PF00293 NUDIX domain M1S35_05960 PF00912 Transglycosylase M1S35_05960 PF00905 Penicillin binding protein transpeptidase domain M1S35_05960 PF14814 Bifunctional transglycosylase second domain M1S35_05965 PF01513 ATP-NAD kinase M1S35_05970 PF07023 Protein of unknown function (DUF1315) M1S35_05975 PF00591 Glycosyl transferase family, a/b domain M1S35_05975 PF02885 Glycosyl transferase family, helical bundle domain M1S35_05980 PF00375 Sodium:dicarboxylate symporter family M1S35_05985 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_05985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_05985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_05990 PF00756 Putative esterase M1S35_05995 PF01817 Chorismate mutase type II M1S35_05995 PF01842 ACT domain M1S35_05995 PF00800 Prephenate dehydratase M1S35_06000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S35_06010 PF07687 Peptidase dimerisation domain M1S35_06010 PF01546 Peptidase family M20/M25/M40 M1S35_06015 PF12706 Beta-lactamase superfamily domain M1S35_06025 PF03883 Peroxide stress protein YaaA M1S35_06035 PF05690 Thiazole biosynthesis protein ThiG M1S35_06045 PF04241 Protein of unknown function (DUF423) M1S35_06050 PF00140 Sigma-70 factor, region 1.2 M1S35_06050 PF04542 Sigma-70 region 2 M1S35_06050 PF04545 Sigma-70, region 4 M1S35_06065 PF00313 'Cold-shock' DNA-binding domain M1S35_06070 PF00270 DEAD/DEAH box helicase M1S35_06070 PF00271 Helicase conserved C-terminal domain M1S35_06080 PF00881 Nitroreductase family M1S35_06085 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S35_06085 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S35_06095 PF00589 Phage integrase family M1S35_06430 PF01180 Dihydroorotate dehydrogenase M1S35_06435 PF02674 Colicin V production protein M1S35_06440 PF00156 Phosphoribosyl transferase domain M1S35_06455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S35_06455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S35_06460 PF01435 Peptidase family M48 M1S35_06465 PF09424 Yqey-like protein M1S35_06470 PF01165 Ribosomal protein S21 M1S35_06475 PF00814 Glycoprotease family M1S35_06495 PF00069 Protein kinase domain M1S35_06520 PF03466 LysR substrate binding domain M1S35_06520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_06525 PF00202 Aminotransferase class-III M1S35_06530 PF00171 Aldehyde dehydrogenase family M1S35_06535 PF00324 Amino acid permease M1S35_06565 PF04076 Bacterial OB fold (BOF) protein M1S35_06590 PF00561 alpha/beta hydrolase fold M1S35_06595 PF03616 Sodium/glutamate symporter M1S35_06605 PF07729 FCD domain M1S35_06605 PF00392 Bacterial regulatory proteins, gntR family M1S35_06655 PF00083 Sugar (and other) transporter M1S35_06655 PF08946 Osmosensory transporter coiled coil M1S35_06680 PF00155 Aminotransferase class I and II M1S35_06685 PF02080 TrkA-C domain M1S35_06685 PF06826 Predicted Permease Membrane Region M1S35_06695 PF04403 Paraquat-inducible protein A M1S35_06700 PF02470 MlaD protein M1S35_06710 PF01177 Asp/Glu/Hydantoin racemase M1S35_06715 PF00892 EamA-like transporter family M1S35_06720 PF07995 Glucose / Sorbosone dehydrogenase M1S35_06730 PF13610 DDE domain M1S35_06740 PF01636 Phosphotransferase enzyme family M1S35_06745 PF13610 DDE domain M1S35_06760 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_06770 PF00893 Small Multidrug Resistance protein M1S35_06775 PF00809 Pterin binding enzyme M1S35_06790 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S35_06805 PF00005 ABC transporter M1S35_06805 PF12848 ABC transporter M1S35_06810 PF01636 Phosphotransferase enzyme family M1S35_06820 PF13005 zinc-finger binding domain of transposase IS66 M1S35_06820 PF03050 Transposase IS66 family M1S35_06820 PF13817 IS66 C-terminal element M1S35_06820 PF13007 Transposase C of IS166 homeodomain M1S35_06845 PF13610 DDE domain M1S35_06860 PF00375 Sodium:dicarboxylate symporter family M1S35_06870 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S35_06870 PF00753 Metallo-beta-lactamase superfamily M1S35_06875 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_06880 PF00005 ABC transporter M1S35_06880 PF09383 NIL domain M1S35_06885 PF03180 NLPA lipoprotein M1S35_06890 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S35_06890 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S35_06890 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S35_06895 PF02142 MGS-like domain M1S35_06895 PF01808 AICARFT/IMPCHase bienzyme M1S35_06900 PF02954 Bacterial regulatory protein, Fis family M1S35_06920 PF01134 Glucose inhibited division protein A M1S35_06920 PF13932 GidA associated domain M1S35_06930 PF14403 Circularly permuted ATP-grasp type 2 M1S35_06940 PF08379 Bacterial transglutaminase-like N-terminal region M1S35_06940 PF01841 Transglutaminase-like superfamily M1S35_06950 PF01168 Alanine racemase, N-terminal domain M1S35_06950 PF00842 Alanine racemase, C-terminal domain M1S35_06955 PF03796 DnaB-like helicase C terminal domain M1S35_06955 PF00772 DnaB-like helicase N terminal domain M1S35_06960 PF03948 Ribosomal protein L9, C-terminal domain M1S35_06960 PF01281 Ribosomal protein L9, N-terminal domain M1S35_06965 PF01084 Ribosomal protein S18 M1S35_06970 PF01250 Ribosomal protein S6 M1S35_06975 PF01040 UbiA prenyltransferase family M1S35_06980 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S35_06985 PF00510 Cytochrome c oxidase subunit III M1S35_06990 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S35_06995 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S35_06995 PF06481 COX Aromatic Rich Motif M1S35_07005 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S35_07005 PF00391 PEP-utilising enzyme, mobile domain M1S35_07005 PF02896 PEP-utilising enzyme, TIM barrel domain M1S35_07010 PF03618 Kinase/pyrophosphorylase M1S35_07020 PF14883 Hypothetical glycosyl hydrolase family 13 M1S35_07020 PF01522 Polysaccharide deacetylase M1S35_07025 PF00535 Glycosyl transferase family 2 M1S35_07030 PF13994 PgaD-like protein M1S35_07040 PF00296 Luciferase-like monooxygenase M1S35_07055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_07055 PF03466 LysR substrate binding domain M1S35_07065 PF03462 PCRF domain M1S35_07065 PF00472 RF-1 domain M1S35_07070 PF13847 Methyltransferase domain M1S35_07070 PF17827 PrmC N-terminal domain M1S35_07075 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_07080 PF09084 NMT1/THI5 like M1S35_07085 PF12833 Helix-turn-helix domain M1S35_07090 PF00106 short chain dehydrogenase M1S35_07095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_07095 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_07095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_07100 PF00501 AMP-binding enzyme M1S35_07100 PF13193 AMP-binding enzyme C-terminal domain M1S35_07105 PF01613 Flavin reductase like domain M1S35_07110 PF00899 ThiF family M1S35_07115 PF03109 ABC1 family M1S35_07130 PF03814 Potassium-transporting ATPase A subunit M1S35_07140 PF02669 K+-transporting ATPase, c chain M1S35_07145 PF13493 Domain of unknown function (DUF4118) M1S35_07145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_07145 PF00512 His Kinase A (phospho-acceptor) domain M1S35_07145 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S35_07150 PF00072 Response regulator receiver domain M1S35_07150 PF00486 Transcriptional regulatory protein, C terminal M1S35_07155 PF00120 Glutamine synthetase, catalytic domain M1S35_07165 PF03232 Ubiquinone biosynthesis protein COQ7 M1S35_07170 PF07690 Major Facilitator Superfamily M1S35_07175 PF01103 Surface antigen M1S35_07175 PF17243 POTRA domain TamA domain 1 M1S35_07175 PF07244 Surface antigen variable number repeat M1S35_07190 PF00330 Aconitase family (aconitate hydratase) M1S35_07190 PF11791 Aconitate B N-terminal domain M1S35_07190 PF06434 Aconitate hydratase 2 N-terminus M1S35_07200 PF00520 Ion transport protein M1S35_07200 PF00027 Cyclic nucleotide-binding domain M1S35_07205 PF07690 Major Facilitator Superfamily M1S35_07220 PF03466 LysR substrate binding domain M1S35_07220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_07225 PF04284 Protein of unknown function (DUF441) M1S35_07235 PF00849 RNA pseudouridylate synthase M1S35_07235 PF01479 S4 domain M1S35_07250 PF00849 RNA pseudouridylate synthase M1S35_07250 PF01479 S4 domain M1S35_07255 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S35_07260 PF08676 MutL C terminal dimerisation domain M1S35_07260 PF01119 DNA mismatch repair protein, C-terminal domain M1S35_07270 PF17209 Hfq protein M1S35_07280 PF00881 Nitroreductase family M1S35_07290 PF00149 Calcineurin-like phosphoesterase M1S35_07295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S35_07300 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S35_07300 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S35_07305 PF02540 NAD synthase M1S35_07305 PF00958 GMP synthase C terminal domain M1S35_07305 PF00117 Glutamine amidotransferase class-I M1S35_07310 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S35_07315 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S35_07320 PF13520 Amino acid permease M1S35_07325 PF00171 Aldehyde dehydrogenase family M1S35_07340 PF00465 Iron-containing alcohol dehydrogenase M1S35_07345 PF14493 Helix-turn-helix domain M1S35_07345 PF05970 PIF1-like helicase M1S35_07355 PF06445 GyrI-like small molecule binding domain M1S35_07360 PF02110 Hydroxyethylthiazole kinase family M1S35_07375 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S35_07375 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S35_07375 PF01433 Peptidase family M1 domain M1S35_07385 PF00106 short chain dehydrogenase M1S35_07395 PF01817 Chorismate mutase type II M1S35_07400 PF01037 Lrp/AsnC ligand binding domain M1S35_07415 PF00440 Bacterial regulatory proteins, tetR family M1S35_07420 PF07715 TonB-dependent Receptor Plug Domain M1S35_07420 PF00593 TonB dependent receptor M1S35_07425 PF00924 Mechanosensitive ion channel M1S35_07460 PF00593 TonB dependent receptor M1S35_07460 PF07715 TonB-dependent Receptor Plug Domain M1S35_07480 PF00005 ABC transporter M1S35_07480 PF12848 ABC transporter M1S35_07485 PF00582 Universal stress protein family M1S35_07510 PF00690 Cation transporter/ATPase, N-terminus M1S35_07510 PF00689 Cation transporting ATPase, C-terminus M1S35_07515 PF02308 MgtC family M1S35_07520 PF03594 Benzoate membrane transport protein M1S35_07525 PF01037 Lrp/AsnC ligand binding domain M1S35_07530 PF01810 LysE type translocator M1S35_07535 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S35_07540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_07540 PF03466 LysR substrate binding domain M1S35_07550 PF00108 Thiolase, N-terminal domain M1S35_07550 PF02803 Thiolase, C-terminal domain M1S35_07560 PF01575 MaoC like domain M1S35_07565 PF00144 Beta-lactamase M1S35_07575 PF07690 Major Facilitator Superfamily M1S35_07580 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S35_07580 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S35_07580 PF12169 DNA polymerase III subunits gamma and tau domain III M1S35_07585 PF04185 Phosphoesterase family M1S35_07585 PF05506 Domain of unknown function (DUF756) M1S35_07590 PF03061 Thioesterase superfamily M1S35_07595 PF00465 Iron-containing alcohol dehydrogenase M1S35_07605 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S35_07610 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S35_07610 PF01565 FAD binding domain M1S35_07625 PF01645 Conserved region in glutamate synthase M1S35_07715 PF01381 Helix-turn-helix M1S35_07920 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system M1S35_08025 PF12832 MFS_1 like family M1S35_08035 PF00289 Biotin carboxylase, N-terminal domain M1S35_08035 PF02785 Biotin carboxylase C-terminal domain M1S35_08035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S35_08040 PF00364 Biotin-requiring enzyme M1S35_08045 PF01220 Dehydroquinase class II M1S35_08050 PF00817 impB/mucB/samB family M1S35_08050 PF11799 impB/mucB/samB family C-terminal domain M1S35_08050 PF13438 Domain of unknown function (DUF4113) M1S35_08060 PF00005 ABC transporter M1S35_08065 PF00072 Response regulator receiver domain M1S35_08065 PF00486 Transcriptional regulatory protein, C terminal M1S35_08075 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S35_08075 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_08075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S35_08075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S35_08075 PF04324 BFD-like [2Fe-2S] binding domain M1S35_08075 PF13806 Rieske-like [2Fe-2S] domain M1S35_08080 PF04324 BFD-like [2Fe-2S] binding domain M1S35_08080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S35_08080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S35_08080 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_08080 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S35_08085 PF04324 BFD-like [2Fe-2S] binding domain M1S35_08085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S35_08085 PF00384 Molybdopterin oxidoreductase M1S35_08085 PF01568 Molydopterin dinucleotide binding domain M1S35_08090 PF12804 MobA-like NTP transferase domain M1S35_08095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S35_08095 PF00384 Molybdopterin oxidoreductase M1S35_08095 PF01568 Molydopterin dinucleotide binding domain M1S35_08100 PF04055 Radical SAM superfamily M1S35_08100 PF06463 Molybdenum Cofactor Synthesis C M1S35_08110 PF02391 MoaE protein M1S35_08115 PF01967 MoaC family M1S35_08115 PF00994 Probable molybdopterin binding domain M1S35_08120 PF00994 Probable molybdopterin binding domain M1S35_08120 PF03454 MoeA C-terminal region (domain IV) M1S35_08120 PF03453 MoeA N-terminal region (domain I and II) M1S35_08125 PF01638 HxlR-like helix-turn-helix M1S35_08130 PF00392 Bacterial regulatory proteins, gntR family M1S35_08130 PF00155 Aminotransferase class I and II M1S35_08135 PF00892 EamA-like transporter family M1S35_08155 PF02635 DsrE/DsrF-like family M1S35_08160 PF16363 GDP-mannose 4,6 dehydratase M1S35_08165 PF10415 Fumarase C C-terminus M1S35_08165 PF00206 Lyase M1S35_08185 PF01266 FAD dependent oxidoreductase M1S35_08195 PF02542 YgbB family M1S35_08205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S35_08205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S35_08210 PF00440 Bacterial regulatory proteins, tetR family M1S35_08215 PF00158 Sigma-54 interaction domain M1S35_08215 PF00072 Response regulator receiver domain M1S35_08215 PF02954 Bacterial regulatory protein, Fis family M1S35_08220 PF00512 His Kinase A (phospho-acceptor) domain M1S35_08220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_08220 PF00989 PAS fold M1S35_08225 PF04055 Radical SAM superfamily M1S35_08225 PF18693 TRAM domain M1S35_08225 PF00919 Uncharacterized protein family UPF0004 M1S35_08230 PF00696 Amino acid kinase family M1S35_08235 PF01765 Ribosome recycling factor M1S35_08240 PF01255 Putative undecaprenyl diphosphate synthase M1S35_08250 PF13288 DXP reductoisomerase C-terminal domain M1S35_08250 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S35_08250 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S35_08255 PF13180 PDZ domain M1S35_08255 PF17820 PDZ domain M1S35_08255 PF02163 Peptidase family M50 M1S35_08260 PF01103 Surface antigen M1S35_08260 PF07244 Surface antigen variable number repeat M1S35_08270 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S35_08270 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_08275 PF07977 FabA-like domain M1S35_08280 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_08280 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S35_08295 PF02631 RecX family M1S35_08300 PF00154 recA bacterial DNA recombination protein M1S35_08305 PF01479 S4 domain M1S35_08310 PF13419 Haloacid dehalogenase-like hydrolase M1S35_08335 PF01037 Lrp/AsnC ligand binding domain M1S35_08340 PF00266 Aminotransferase class-V M1S35_08345 PF00324 Amino acid permease M1S35_08360 PF00082 Subtilase family M1S35_08360 PF05922 Peptidase inhibitor I9 M1S35_08365 PF00916 Sulfate permease family M1S35_08365 PF01740 STAS domain M1S35_08370 PF02586 SOS response associated peptidase (SRAP) M1S35_08375 PF07995 Glucose / Sorbosone dehydrogenase M1S35_08385 PF00563 EAL domain M1S35_08385 PF00990 Diguanylate cyclase, GGDEF domain M1S35_08385 PF03707 Bacterial signalling protein N terminal repeat M1S35_08405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S35_08405 PF02378 Phosphotransferase system, EIIC M1S35_08410 PF00294 pfkB family carbohydrate kinase M1S35_08415 PF00391 PEP-utilising enzyme, mobile domain M1S35_08415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S35_08415 PF00381 PTS HPr component phosphorylation site M1S35_08415 PF02896 PEP-utilising enzyme, TIM barrel domain M1S35_08415 PF05524 PEP-utilising enzyme, N-terminal M1S35_08440 PF05525 Branched-chain amino acid transport protein M1S35_08445 PF00557 Metallopeptidase family M24 M1S35_08450 PF03466 LysR substrate binding domain M1S35_08450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_08460 PF00462 Glutaredoxin M1S35_08465 PF00202 Aminotransferase class-III M1S35_08470 PF00571 CBS domain M1S35_08470 PF00478 IMP dehydrogenase / GMP reductase domain M1S35_08495 PF00448 SRP54-type protein, GTPase domain M1S35_08495 PF02881 SRP54-type protein, helical bundle domain M1S35_08505 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S35_08520 PF08173 Membrane bound YbgT-like protein M1S35_08525 PF02322 Cytochrome bd terminal oxidase subunit II M1S35_08530 PF01654 Cytochrome bd terminal oxidase subunit I M1S35_08540 PF07290 Protein of unknown function (DUF1449) M1S35_08550 PF00294 pfkB family carbohydrate kinase M1S35_08555 PF00593 TonB dependent receptor M1S35_08555 PF07715 TonB-dependent Receptor Plug Domain M1S35_08560 PF05193 Peptidase M16 inactive domain M1S35_08560 PF00675 Insulinase (Peptidase family M16) M1S35_08560 PF08367 Peptidase M16C associated M1S35_08565 PF02253 Phospholipase A1 M1S35_08570 PF02386 Cation transport protein M1S35_08575 PF02080 TrkA-C domain M1S35_08575 PF02254 TrkA-N domain M1S35_08580 PF00291 Pyridoxal-phosphate dependent enzyme M1S35_08580 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S35_08585 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S35_08600 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S35_08600 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S35_08610 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S35_08615 PF17871 AAA lid domain M1S35_08615 PF10431 C-terminal, D2-small domain, of ClpB protein M1S35_08615 PF00004 ATPase family associated with various cellular activities (AAA) M1S35_08615 PF07724 AAA domain (Cdc48 subfamily) M1S35_08615 PF02861 Clp amino terminal domain, pathogenicity island component M1S35_08620 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S35_08625 PF00793 DAHP synthetase I family M1S35_08640 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_08640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S35_08670 PF00117 Glutamine amidotransferase class-I M1S35_08670 PF06418 CTP synthase N-terminus M1S35_08675 PF00793 DAHP synthetase I family M1S35_08680 PF00113 Enolase, C-terminal TIM barrel domain M1S35_08680 PF03952 Enolase, N-terminal domain M1S35_08685 PF04239 Protein of unknown function (DUF421) M1S35_08690 PF04977 Septum formation initiator M1S35_08695 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S35_08700 PF01144 Coenzyme A transferase M1S35_08705 PF01144 Coenzyme A transferase M1S35_08710 PF02803 Thiolase, C-terminal domain M1S35_08710 PF00108 Thiolase, N-terminal domain M1S35_08715 PF00206 Lyase M1S35_08715 PF10397 Adenylosuccinate lyase C-terminus M1S35_08720 PF00561 alpha/beta hydrolase fold M1S35_08725 PF07690 Major Facilitator Superfamily M1S35_08730 PF02627 Carboxymuconolactone decarboxylase family M1S35_08735 PF00775 Dioxygenase M1S35_08735 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S35_08740 PF00775 Dioxygenase M1S35_08745 PF01487 Type I 3-dehydroquinase M1S35_08750 PF05048 Periplasmic copper-binding protein (NosD) M1S35_08755 PF04966 Carbohydrate-selective porin, OprB family M1S35_08760 PF13360 PQQ-like domain M1S35_08760 PF01011 PQQ enzyme repeat M1S35_08770 PF04143 Sulphur transport M1S35_08780 PF00753 Metallo-beta-lactamase superfamily M1S35_08785 PF01614 Bacterial transcriptional regulator M1S35_08785 PF09339 IclR helix-turn-helix domain M1S35_08790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_08790 PF03466 LysR substrate binding domain M1S35_08795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_08795 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_08795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_08810 PF00106 short chain dehydrogenase M1S35_08820 PF07690 Major Facilitator Superfamily M1S35_08830 PF01425 Amidase M1S35_08835 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S35_08850 PF00355 Rieske [2Fe-2S] domain M1S35_08850 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S35_08865 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S35_08865 PF00175 Oxidoreductase NAD-binding domain M1S35_08870 PF01613 Flavin reductase like domain M1S35_08875 PF02311 AraC-like ligand binding domain M1S35_08875 PF12833 Helix-turn-helix domain M1S35_08880 PF01179 Copper amine oxidase, enzyme domain M1S35_08880 PF07833 Copper amine oxidase N-terminal domain M1S35_08880 PF02727 Copper amine oxidase, N2 domain M1S35_08880 PF02728 Copper amine oxidase, N3 domain M1S35_08890 PF00171 Aldehyde dehydrogenase family M1S35_08895 PF01804 Penicillin amidase M1S35_08900 PF12146 Serine aminopeptidase, S33 M1S35_08905 PF02803 Thiolase, C-terminal domain M1S35_08905 PF00108 Thiolase, N-terminal domain M1S35_08910 PF01144 Coenzyme A transferase M1S35_08915 PF01144 Coenzyme A transferase M1S35_08920 PF04444 Catechol dioxygenase N terminus M1S35_08920 PF00775 Dioxygenase M1S35_08925 PF02426 Muconolactone delta-isomerase M1S35_08930 PF13378 Enolase C-terminal domain-like M1S35_08930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S35_08935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_08935 PF03466 LysR substrate binding domain M1S35_08945 PF00392 Bacterial regulatory proteins, gntR family M1S35_08945 PF07729 FCD domain M1S35_08950 PF00920 Dehydratase family M1S35_08955 PF07690 Major Facilitator Superfamily M1S35_08965 PF00171 Aldehyde dehydrogenase family M1S35_08985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_08985 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_08985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_08995 PF02954 Bacterial regulatory protein, Fis family M1S35_08995 PF06506 Propionate catabolism activator M1S35_08995 PF00158 Sigma-54 interaction domain M1S35_09000 PF00501 AMP-binding enzyme M1S35_09000 PF13193 AMP-binding enzyme C-terminal domain M1S35_09005 PF04341 Protein of unknown function, DUF485 M1S35_09010 PF00474 Sodium:solute symporter family M1S35_09015 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_09015 PF00107 Zinc-binding dehydrogenase M1S35_09020 PF00171 Aldehyde dehydrogenase family M1S35_09030 PF00561 alpha/beta hydrolase fold M1S35_09035 PF00199 Catalase M1S35_09035 PF06628 Catalase-related immune-responsive M1S35_09050 PF07859 alpha/beta hydrolase fold M1S35_09055 PF01047 MarR family M1S35_09060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S35_09060 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_09065 PF00106 short chain dehydrogenase M1S35_09070 PF01872 RibD C-terminal domain M1S35_09075 PF00376 MerR family regulatory protein M1S35_09075 PF09278 MerR, DNA binding M1S35_09085 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_09095 PF12706 Beta-lactamase superfamily domain M1S35_09100 PF00440 Bacterial regulatory proteins, tetR family M1S35_09100 PF08359 YsiA-like protein, C-terminal region M1S35_09110 PF00857 Isochorismatase family M1S35_09115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_09115 PF03466 LysR substrate binding domain M1S35_09120 PF07995 Glucose / Sorbosone dehydrogenase M1S35_09125 PF00999 Sodium/hydrogen exchanger family M1S35_09125 PF02254 TrkA-N domain M1S35_09135 PF07687 Peptidase dimerisation domain M1S35_09135 PF01546 Peptidase family M20/M25/M40 M1S35_09145 PF08479 POTRA domain, ShlB-type M1S35_09145 PF17287 POTRA domain M1S35_09145 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S35_09150 PF13018 Extended Signal Peptide of Type V secretion system M1S35_09150 PF05860 haemagglutination activity domain M1S35_09150 PF04829 Pre-toxin domain with VENN motif M1S35_09150 PF13332 Hemagglutinin repeat M1S35_09165 PF07690 Major Facilitator Superfamily M1S35_09170 PF04909 Amidohydrolase M1S35_09180 PF00392 Bacterial regulatory proteins, gntR family M1S35_09180 PF07702 UTRA domain M1S35_09185 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S35_09195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_09195 PF03466 LysR substrate binding domain M1S35_09215 PF07690 Major Facilitator Superfamily M1S35_09220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S35_09220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S35_09220 PF01842 ACT domain M1S35_09225 PF03737 Aldolase/RraA M1S35_09255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S35_09255 PF00529 HlyD membrane-fusion protein of T1SS M1S35_09270 PF00171 Aldehyde dehydrogenase family M1S35_09275 PF00920 Dehydratase family M1S35_09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_09285 PF03466 LysR substrate binding domain M1S35_09290 PF01370 NAD dependent epimerase/dehydratase family M1S35_09295 PF07690 Major Facilitator Superfamily M1S35_09300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S35_09300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S35_09305 PF12833 Helix-turn-helix domain M1S35_09305 PF06719 AraC-type transcriptional regulator N-terminus M1S35_09320 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_09320 PF00107 Zinc-binding dehydrogenase M1S35_09330 PF01032 FecCD transport family M1S35_09335 PF00005 ABC transporter M1S35_09355 PF14572 Phosphoribosyl synthetase-associated domain M1S35_09355 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S35_09360 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S35_09435 PF00196 Bacterial regulatory proteins, luxR family M1S35_09440 PF01425 Amidase M1S35_09445 PF13533 Biotin-lipoyl like M1S35_09450 PF07690 Major Facilitator Superfamily M1S35_09475 PF01975 Survival protein SurE M1S35_09485 PF13291 ACT domain M1S35_09485 PF04607 Region found in RelA / SpoT proteins M1S35_09485 PF02824 TGS domain M1S35_09535 PF12146 Serine aminopeptidase, S33 M1S35_09540 PF02311 AraC-like ligand binding domain M1S35_09540 PF12833 Helix-turn-helix domain M1S35_09550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_09550 PF00672 HAMP domain M1S35_09550 PF00512 His Kinase A (phospho-acceptor) domain M1S35_09550 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S35_09555 PF00486 Transcriptional regulatory protein, C terminal M1S35_09555 PF00072 Response regulator receiver domain M1S35_09560 PF00529 HlyD membrane-fusion protein of T1SS M1S35_09560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S35_09565 PF00873 AcrB/AcrD/AcrF family M1S35_09570 PF02321 Outer membrane efflux protein M1S35_09575 PF12146 Serine aminopeptidase, S33 M1S35_09580 PF00743 Flavin-binding monooxygenase-like M1S35_09585 PF01593 Flavin containing amine oxidoreductase M1S35_09600 PF01266 FAD dependent oxidoreductase M1S35_09620 PF16970 Type-1 fimbrial protein, A M1S35_09630 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S35_09630 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S35_09635 PF13954 PapC N-terminal domain M1S35_09635 PF00577 Outer membrane usher protein M1S35_09635 PF13953 PapC C-terminal domain M1S35_09640 PF00419 Fimbrial protein M1S35_09650 PF00107 Zinc-binding dehydrogenase M1S35_09650 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_09660 PF00199 Catalase M1S35_09675 PF13091 PLD-like domain M1S35_09690 PF01244 Membrane dipeptidase (Peptidase family M19) M1S35_09695 PF04055 Radical SAM superfamily M1S35_09695 PF13186 Iron-sulfur cluster-binding domain M1S35_09700 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S35_09705 PF03070 TENA/THI-4/PQQC family M1S35_09710 PF12706 Beta-lactamase superfamily domain M1S35_09715 PF08042 PqqA family M1S35_09720 PF02503 Polyphosphate kinase middle domain M1S35_09720 PF13090 Polyphosphate kinase C-terminal domain 2 M1S35_09720 PF17941 Polyphosphate kinase C-terminal domain 1 M1S35_09720 PF13089 Polyphosphate kinase N-terminal domain M1S35_09725 PF00149 Calcineurin-like phosphoesterase M1S35_09735 PF00550 Phosphopantetheine attachment site M1S35_09735 PF00857 Isochorismatase family M1S35_09740 PF00106 short chain dehydrogenase M1S35_09745 PF00005 ABC transporter M1S35_09745 PF03459 TOBE domain M1S35_09750 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_09760 PF03459 TOBE domain M1S35_09765 PF00355 Rieske [2Fe-2S] domain M1S35_09765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S35_09770 PF00866 Ring hydroxylating beta subunit M1S35_09775 PF00970 Oxidoreductase FAD-binding domain M1S35_09775 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S35_09775 PF00175 Oxidoreductase NAD-binding domain M1S35_09780 PF14525 AraC-binding-like domain M1S35_09780 PF12833 Helix-turn-helix domain M1S35_09790 PF01613 Flavin reductase like domain M1S35_09805 PF01738 Dienelactone hydrolase family M1S35_09810 PF07690 Major Facilitator Superfamily M1S35_09815 PF06719 AraC-type transcriptional regulator N-terminus M1S35_09815 PF12833 Helix-turn-helix domain M1S35_09840 PF03466 LysR substrate binding domain M1S35_09840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_09845 PF01144 Coenzyme A transferase M1S35_09850 PF01144 Coenzyme A transferase M1S35_09855 PF02667 Short chain fatty acid transporter M1S35_09860 PF00108 Thiolase, N-terminal domain M1S35_09860 PF02803 Thiolase, C-terminal domain M1S35_09865 PF03466 LysR substrate binding domain M1S35_09865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_09870 PF03466 LysR substrate binding domain M1S35_09885 PF10415 Fumarase C C-terminus M1S35_09885 PF00206 Lyase M1S35_09890 PF00593 TonB dependent receptor M1S35_09890 PF07715 TonB-dependent Receptor Plug Domain M1S35_09895 PF00083 Sugar (and other) transporter M1S35_09910 PF00005 ABC transporter M1S35_09915 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_09920 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S35_09935 PF07702 UTRA domain M1S35_09935 PF00392 Bacterial regulatory proteins, gntR family M1S35_09945 PF02525 Flavodoxin-like fold M1S35_09950 PF01638 HxlR-like helix-turn-helix M1S35_09955 PF12833 Helix-turn-helix domain M1S35_09955 PF06445 GyrI-like small molecule binding domain M1S35_09970 PF01925 Sulfite exporter TauE/SafE M1S35_09985 PF00753 Metallo-beta-lactamase superfamily M1S35_09985 PF04273 Putative phosphatase (DUF442) M1S35_09990 PF00072 Response regulator receiver domain M1S35_09990 PF00158 Sigma-54 interaction domain M1S35_09990 PF02954 Bacterial regulatory protein, Fis family M1S35_09995 PF01062 Bestrophin, RFP-TM, chloride channel M1S35_10000 PF00107 Zinc-binding dehydrogenase M1S35_10000 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_10005 PF00106 short chain dehydrogenase M1S35_10010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S35_10010 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_10015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S35_10015 PF00364 Biotin-requiring enzyme M1S35_10015 PF02817 e3 binding domain M1S35_10020 PF02780 Transketolase, C-terminal domain M1S35_10020 PF02779 Transketolase, pyrimidine binding domain M1S35_10025 PF00676 Dehydrogenase E1 component M1S35_10030 PF04055 Radical SAM superfamily M1S35_10045 PF08448 PAS fold M1S35_10045 PF00990 Diguanylate cyclase, GGDEF domain M1S35_10050 PF01264 Chorismate synthase M1S35_10055 PF05175 Methyltransferase small domain M1S35_10060 PF00291 Pyridoxal-phosphate dependent enzyme M1S35_10070 PF01434 Peptidase family M41 M1S35_10070 PF17862 AAA+ lid domain M1S35_10070 PF00004 ATPase family associated with various cellular activities (AAA) M1S35_10080 PF05166 YcgL domain M1S35_10100 PF00570 HRDC domain M1S35_10100 PF01612 3'-5' exonuclease M1S35_10105 PF02132 RecR protein M1S35_10105 PF13662 Toprim domain M1S35_10110 PF02575 YbaB/EbfC DNA-binding family M1S35_10120 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S35_10125 PF00561 alpha/beta hydrolase fold M1S35_10130 PF08241 Methyltransferase domain M1S35_10160 PF01230 HIT domain M1S35_10195 PF00005 ABC transporter M1S35_10200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S35_10210 PF02684 Lipid-A-disaccharide synthetase M1S35_10215 PF00593 TonB dependent receptor M1S35_10215 PF07715 TonB-dependent Receptor Plug Domain M1S35_10235 PF01925 Sulfite exporter TauE/SafE M1S35_10240 PF00793 DAHP synthetase I family M1S35_10245 PF02654 Cobalamin-5-phosphate synthase M1S35_10260 PF02277 Phosphoribosyltransferase M1S35_10265 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S35_10275 PF13419 Haloacid dehalogenase-like hydrolase M1S35_10300 PF07715 TonB-dependent Receptor Plug Domain M1S35_10300 PF00593 TonB dependent receptor M1S35_10315 PF06276 Ferric iron reductase FhuF-like transporter M1S35_10315 PF04183 IucA / IucC family M1S35_10320 PF06276 Ferric iron reductase FhuF-like transporter M1S35_10320 PF04183 IucA / IucC family M1S35_10325 PF07690 Major Facilitator Superfamily M1S35_10330 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S35_10335 PF04183 IucA / IucC family M1S35_10335 PF06276 Ferric iron reductase FhuF-like transporter M1S35_10340 PF04073 Aminoacyl-tRNA editing domain M1S35_10350 PF03109 ABC1 family M1S35_10355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_10355 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_10355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_10360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_10360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_10360 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_10365 PF00487 Fatty acid desaturase M1S35_10370 PF12852 Cupin M1S35_10370 PF12833 Helix-turn-helix domain M1S35_10375 PF00639 PPIC-type PPIASE domain M1S35_10375 PF09312 SurA N-terminal domain M1S35_10380 PF00216 Bacterial DNA-binding protein M1S35_10395 PF02082 Transcriptional regulator M1S35_10400 PF00266 Aminotransferase class-V M1S35_10405 PF01592 NifU-like N terminal domain M1S35_10410 PF01521 Iron-sulphur cluster biosynthesis M1S35_10415 PF07743 HSCB C-terminal oligomerisation domain M1S35_10415 PF00226 DnaJ domain M1S35_10420 PF00012 Hsp70 protein M1S35_10425 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S35_10430 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S35_10440 PF02559 CarD-like/TRCF domain M1S35_10440 PF00270 DEAD/DEAH box helicase M1S35_10440 PF00271 Helicase conserved C-terminal domain M1S35_10440 PF03461 TRCF domain M1S35_10440 PF17757 UvrB interaction domain M1S35_10460 PF03737 Aldolase/RraA M1S35_10465 PF13460 NAD(P)H-binding M1S35_10470 PF01649 Ribosomal protein S20 M1S35_10480 PF00459 Inositol monophosphatase family M1S35_10495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S35_10495 PF00005 ABC transporter M1S35_10500 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_10505 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_10510 PF01432 Peptidase family M3 M1S35_10530 PF07715 TonB-dependent Receptor Plug Domain M1S35_10530 PF00593 TonB dependent receptor M1S35_10540 PF01618 MotA/TolQ/ExbB proton channel family M1S35_10545 PF02472 Biopolymer transport protein ExbD/TolR M1S35_10550 PF02472 Biopolymer transport protein ExbD/TolR M1S35_10560 PF01274 Malate synthase M1S35_10565 PF03969 AFG1-like ATPase M1S35_10575 PF00743 Flavin-binding monooxygenase-like M1S35_10585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S35_10595 PF00216 Bacterial DNA-binding protein M1S35_10600 PF00575 S1 RNA binding domain M1S35_10605 PF02224 Cytidylate kinase M1S35_10615 PF14437 MafB19-like deaminase M1S35_10625 PF03167 Uracil DNA glycosylase superfamily M1S35_10635 PF03934 Type II secretion system (T2SS), protein K M1S35_10640 PF11612 Type II secretion system (T2SS), protein J M1S35_10640 PF07963 Prokaryotic N-terminal methylation motif M1S35_10645 PF02501 Type II secretion system (T2SS), protein I M1S35_10645 PF07963 Prokaryotic N-terminal methylation motif M1S35_10660 PF01026 TatD related DNase M1S35_10670 PF09115 DNA polymerase III, delta subunit, C terminal M1S35_10675 PF02348 Cytidylyltransferase M1S35_10680 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S35_10685 PF00664 ABC transporter transmembrane region M1S35_10685 PF00005 ABC transporter M1S35_10695 PF01618 MotA/TolQ/ExbB proton channel family M1S35_10700 PF17762 HTH domain found in ParB protein M1S35_10700 PF02195 ParB-like nuclease domain M1S35_10705 PF13614 AAA domain M1S35_10710 PF02527 rRNA small subunit methyltransferase G M1S35_10715 PF00483 Nucleotidyl transferase M1S35_10720 PF01636 Phosphotransferase enzyme family M1S35_10725 PF04453 LPS transport system D M1S35_10725 PF03968 OstA-like protein M1S35_10730 PF00639 PPIC-type PPIASE domain M1S35_10730 PF09312 SurA N-terminal domain M1S35_10735 PF01116 Fructose-bisphosphate aldolase class-II M1S35_10745 PF00162 Phosphoglycerate kinase M1S35_10755 PF02545 Maf-like protein M1S35_10760 PF08007 Cupin superfamily protein M1S35_10775 PF00375 Sodium:dicarboxylate symporter family M1S35_10780 PF06912 Protein of unknown function (DUF1275) M1S35_10785 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S35_10790 PF00664 ABC transporter transmembrane region M1S35_10790 PF00005 ABC transporter M1S35_10800 PF12833 Helix-turn-helix domain M1S35_10800 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S35_10805 PF01597 Glycine cleavage H-protein M1S35_10810 PF02146 Sir2 family M1S35_10815 PF00474 Sodium:solute symporter family M1S35_10820 PF01037 Lrp/AsnC ligand binding domain M1S35_10825 PF00171 Aldehyde dehydrogenase family M1S35_10825 PF01619 Proline dehydrogenase M1S35_10825 PF14850 DNA-binding domain of Proline dehydrogenase M1S35_10825 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S35_10830 PF04229 GrpB protein M1S35_10835 PF05958 tRNA (Uracil-5-)-methyltransferase M1S35_10845 PF09992 Phosphodiester glycosidase M1S35_10855 PF04264 YceI-like domain M1S35_10865 PF00456 Transketolase, thiamine diphosphate binding domain M1S35_10865 PF02780 Transketolase, C-terminal domain M1S35_10865 PF02779 Transketolase, pyrimidine binding domain M1S35_10870 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S35_10870 PF02772 S-adenosylmethionine synthetase, central domain M1S35_10870 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S35_10895 PF00905 Penicillin binding protein transpeptidase domain M1S35_10910 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S35_10915 PF03853 YjeF-related protein N-terminus M1S35_10915 PF01256 Carbohydrate kinase M1S35_10920 PF08331 Domain of unknown function (DUF1730) M1S35_10925 PF04055 Radical SAM superfamily M1S35_10925 PF06968 Biotin and Thiamin Synthesis associated domain M1S35_10940 PF16970 Type-1 fimbrial protein, A M1S35_10950 PF00577 Outer membrane usher protein M1S35_10950 PF13953 PapC C-terminal domain M1S35_10950 PF13954 PapC N-terminal domain M1S35_10970 PF00892 EamA-like transporter family M1S35_10980 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S35_10990 PF03466 LysR substrate binding domain M1S35_10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_11010 PF00440 Bacterial regulatory proteins, tetR family M1S35_11020 PF01709 Transcriptional regulator M1S35_11025 PF01037 Lrp/AsnC ligand binding domain M1S35_11035 PF00005 ABC transporter M1S35_11040 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_11045 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_11060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_11060 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S35_11070 PF00296 Luciferase-like monooxygenase M1S35_11075 PF03180 NLPA lipoprotein M1S35_11080 PF03180 NLPA lipoprotein M1S35_11085 PF09383 NIL domain M1S35_11085 PF00005 ABC transporter M1S35_11090 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_11095 PF01926 50S ribosome-binding GTPase M1S35_11095 PF06071 Protein of unknown function (DUF933) M1S35_11120 PF03591 AzlC protein M1S35_11125 PF05437 Branched-chain amino acid transport protein (AzlD) M1S35_11135 PF02222 ATP-grasp domain M1S35_11140 PF01909 Nucleotidyltransferase domain M1S35_11140 PF01966 HD domain M1S35_11140 PF08335 GlnD PII-uridylyltransferase M1S35_11145 PF00155 Aminotransferase class I and II M1S35_11155 PF12833 Helix-turn-helix domain M1S35_11155 PF12852 Cupin M1S35_11160 PF00255 Glutathione peroxidase M1S35_11165 PF01641 SelR domain M1S35_11170 PF00155 Aminotransferase class I and II M1S35_11175 PF00375 Sodium:dicarboxylate symporter family M1S35_11180 PF17763 Glutaminase/Asparaginase C-terminal domain M1S35_11180 PF00710 Asparaginase, N-terminal M1S35_11185 PF02811 PHP domain M1S35_11185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S35_11185 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S35_11185 PF01336 OB-fold nucleic acid binding domain M1S35_11185 PF14579 Helix-hairpin-helix motif M1S35_11190 PF00588 SpoU rRNA Methylase family M1S35_11195 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_11210 PF13192 Thioredoxin domain M1S35_11210 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_11225 PF03466 LysR substrate binding domain M1S35_11225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_11230 PF01758 Sodium Bile acid symporter family M1S35_11235 PF01022 Bacterial regulatory protein, arsR family M1S35_11240 PF03960 ArsC family M1S35_11250 PF13382 Adenine deaminase C-terminal domain M1S35_11250 PF01979 Amidohydrolase family M1S35_11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_11260 PF03466 LysR substrate binding domain M1S35_11270 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S35_11275 PF01177 Asp/Glu/Hydantoin racemase M1S35_11280 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S35_11285 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_11290 PF00005 ABC transporter M1S35_11295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S35_11305 PF00083 Sugar (and other) transporter M1S35_11310 PF00296 Luciferase-like monooxygenase M1S35_11315 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S35_11315 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_11315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_11325 PF01654 Cytochrome bd terminal oxidase subunit I M1S35_11330 PF02322 Cytochrome bd terminal oxidase subunit II M1S35_11340 PF00392 Bacterial regulatory proteins, gntR family M1S35_11340 PF00155 Aminotransferase class I and II M1S35_11345 PF03466 LysR substrate binding domain M1S35_11345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_11360 PF00698 Acyl transferase domain M1S35_11365 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S35_11375 PF01039 Carboxyl transferase domain M1S35_11380 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S35_11385 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S35_11390 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S35_11395 PF07690 Major Facilitator Superfamily M1S35_11410 PF00392 Bacterial regulatory proteins, gntR family M1S35_11410 PF00155 Aminotransferase class I and II M1S35_11415 PF04172 LrgB-like family M1S35_11420 PF03788 LrgA family M1S35_11425 PF03466 LysR substrate binding domain M1S35_11425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_11430 PF14834 Glutathione S-transferase, C-terminal domain M1S35_11430 PF02798 Glutathione S-transferase, N-terminal domain M1S35_11435 PF02798 Glutathione S-transferase, N-terminal domain M1S35_11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_11440 PF03466 LysR substrate binding domain M1S35_11450 PF00581 Rhodanese-like domain M1S35_11455 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_11465 PF00266 Aminotransferase class-V M1S35_11475 PF01810 LysE type translocator M1S35_11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_11480 PF03466 LysR substrate binding domain M1S35_11490 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S35_11495 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S35_11500 PF00005 ABC transporter M1S35_11505 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_11510 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_11525 PF00072 Response regulator receiver domain M1S35_11530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_11530 PF00512 His Kinase A (phospho-acceptor) domain M1S35_11530 PF09308 LuxQ, periplasmic M1S35_11530 PF00072 Response regulator receiver domain M1S35_11540 PF01037 Lrp/AsnC ligand binding domain M1S35_11540 PF13404 AsnC-type helix-turn-helix domain M1S35_11550 PF00717 Peptidase S24-like M1S35_11575 PF18011 C-terminal domain found in long catalases M1S35_11575 PF00199 Catalase M1S35_11575 PF06628 Catalase-related immune-responsive M1S35_11585 PF02464 Competence-damaged protein M1S35_11585 PF18146 Damage-inducible protein CinA KH domain M1S35_11585 PF00994 Probable molybdopterin binding domain M1S35_11620 PF03466 LysR substrate binding domain M1S35_11620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_11655 PF07690 Major Facilitator Superfamily M1S35_11665 PF01144 Coenzyme A transferase M1S35_11670 PF01144 Coenzyme A transferase M1S35_11675 PF07690 Major Facilitator Superfamily M1S35_11680 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_11680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_11680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_11685 PF00378 Enoyl-CoA hydratase/isomerase M1S35_11695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S35_11695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S35_11695 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S35_11700 PF00108 Thiolase, N-terminal domain M1S35_11700 PF02803 Thiolase, C-terminal domain M1S35_11705 PF09339 IclR helix-turn-helix domain M1S35_11710 PF07690 Major Facilitator Superfamily M1S35_11715 PF03060 Nitronate monooxygenase M1S35_11720 PF00378 Enoyl-CoA hydratase/isomerase M1S35_11725 PF09339 IclR helix-turn-helix domain M1S35_11730 PF02515 CoA-transferase family III M1S35_11735 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_11735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_11735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_11740 PF07690 Major Facilitator Superfamily M1S35_11745 PF13419 Haloacid dehalogenase-like hydrolase M1S35_11750 PF00266 Aminotransferase class-V M1S35_11755 PF01266 FAD dependent oxidoreductase M1S35_11760 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_11765 PF00005 ABC transporter M1S35_11765 PF08402 TOBE domain M1S35_11775 PF07702 UTRA domain M1S35_11775 PF00392 Bacterial regulatory proteins, gntR family M1S35_11780 PF01494 FAD binding domain M1S35_11785 PF09339 IclR helix-turn-helix domain M1S35_11785 PF01614 Bacterial transcriptional regulator M1S35_11790 PF02525 Flavodoxin-like fold M1S35_11795 PF03466 LysR substrate binding domain M1S35_11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_11800 PF02627 Carboxymuconolactone decarboxylase family M1S35_11805 PF00171 Aldehyde dehydrogenase family M1S35_11815 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S35_11825 PF00171 Aldehyde dehydrogenase family M1S35_11830 PF00296 Luciferase-like monooxygenase M1S35_11835 PF01613 Flavin reductase like domain M1S35_11840 PF12697 Alpha/beta hydrolase family M1S35_11860 PF01292 Prokaryotic cytochrome b561 M1S35_11865 PF00199 Catalase M1S35_11900 PF03061 Thioesterase superfamily M1S35_11905 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_11910 PF07848 PaaX-like protein M1S35_11910 PF08223 PaaX-like protein C-terminal domain M1S35_11915 PF00501 AMP-binding enzyme M1S35_11915 PF14535 AMP-binding enzyme C-terminal domain M1S35_11920 PF02803 Thiolase, C-terminal domain M1S35_11920 PF00108 Thiolase, N-terminal domain M1S35_11925 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S35_11925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S35_11925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S35_11930 PF00378 Enoyl-CoA hydratase/isomerase M1S35_11935 PF00378 Enoyl-CoA hydratase/isomerase M1S35_11940 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S35_11940 PF00175 Oxidoreductase NAD-binding domain M1S35_11940 PF00970 Oxidoreductase FAD-binding domain M1S35_11945 PF01883 Iron-sulfur cluster assembly protein M1S35_11950 PF05138 Phenylacetic acid catabolic protein M1S35_11955 PF06243 Phenylacetic acid degradation B M1S35_11960 PF05138 Phenylacetic acid catabolic protein M1S35_11965 PF01575 MaoC like domain M1S35_11965 PF00171 Aldehyde dehydrogenase family M1S35_11970 PF03313 Serine dehydratase alpha chain M1S35_11970 PF03315 Serine dehydratase beta chain M1S35_11975 PF13520 Amino acid permease M1S35_11980 PF00171 Aldehyde dehydrogenase family M1S35_11985 PF00083 Sugar (and other) transporter M1S35_11995 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_11995 PF04324 BFD-like [2Fe-2S] binding domain M1S35_12005 PF01266 FAD dependent oxidoreductase M1S35_12010 PF05544 Proline racemase M1S35_12015 PF00392 Bacterial regulatory proteins, gntR family M1S35_12025 PF00701 Dihydrodipicolinate synthetase family M1S35_12035 PF00376 MerR family regulatory protein M1S35_12035 PF09278 MerR, DNA binding M1S35_12050 PF02677 Epoxyqueuosine reductase QueH M1S35_12065 PF07690 Major Facilitator Superfamily M1S35_12070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S35_12080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_12080 PF03466 LysR substrate binding domain M1S35_12100 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S35_12105 PF06812 ImpA, N-terminal, type VI secretion system M1S35_12110 PF00004 ATPase family associated with various cellular activities (AAA) M1S35_12110 PF10431 C-terminal, D2-small domain, of ClpB protein M1S35_12110 PF07724 AAA domain (Cdc48 subfamily) M1S35_12110 PF17871 AAA lid domain M1S35_12125 PF00691 OmpA family M1S35_12125 PF01389 OmpA-like transmembrane domain M1S35_12135 PF06761 Intracellular multiplication and human macrophage-killing M1S35_12135 PF14331 ImcF-related N-terminal domain M1S35_12135 PF06744 Type VI secretion protein IcmF C-terminal M1S35_12150 PF05947 Type VI secretion system, TssF M1S35_12165 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S35_12190 PF00005 ABC transporter M1S35_12195 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S35_12200 PF01425 Amidase M1S35_12205 PF08753 NikR C terminal nickel binding domain M1S35_12205 PF01402 Ribbon-helix-helix protein, copG family M1S35_12225 PF02525 Flavodoxin-like fold M1S35_12230 PF00289 Biotin carboxylase, N-terminal domain M1S35_12230 PF02785 Biotin carboxylase C-terminal domain M1S35_12230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S35_12245 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_12245 PF13823 Alcohol dehydrogenase GroES-associated M1S35_12245 PF00107 Zinc-binding dehydrogenase M1S35_12255 PF00440 Bacterial regulatory proteins, tetR family M1S35_12275 PF00654 Voltage gated chloride channel M1S35_12280 PF02785 Biotin carboxylase C-terminal domain M1S35_12280 PF00364 Biotin-requiring enzyme M1S35_12280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S35_12280 PF00289 Biotin carboxylase, N-terminal domain M1S35_12290 PF07286 Protein of unknown function (DUF1445) M1S35_12295 PF03746 LamB/YcsF family M1S35_12300 PF01566 Natural resistance-associated macrophage protein M1S35_12305 PF03466 LysR substrate binding domain M1S35_12305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_12320 PF05593 RHS Repeat M1S35_12320 PF03527 RHS protein M1S35_12325 PF04717 Type VI secretion system, phage-baseplate injector M1S35_12325 PF13296 Putative type VI secretion system Rhs element Vgr M1S35_12325 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S35_12335 PF13419 Haloacid dehalogenase-like hydrolase M1S35_12355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S35_12355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S35_12375 PF07690 Major Facilitator Superfamily M1S35_12390 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S35_12395 PF00563 EAL domain M1S35_12395 PF00990 Diguanylate cyclase, GGDEF domain M1S35_12395 PF03707 Bacterial signalling protein N terminal repeat M1S35_12400 PF00892 EamA-like transporter family M1S35_12405 PF01037 Lrp/AsnC ligand binding domain M1S35_12410 PF00488 MutS domain V M1S35_12410 PF05190 MutS family domain IV M1S35_12410 PF05192 MutS domain III M1S35_12410 PF05188 MutS domain II M1S35_12410 PF01624 MutS domain I M1S35_12420 PF11953 Domain of unknown function (DUF3470) M1S35_12420 PF00037 4Fe-4S binding domain M1S35_12430 PF01596 O-methyltransferase M1S35_12440 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_12445 PF01205 Uncharacterized protein family UPF0029 M1S35_12455 PF00664 ABC transporter transmembrane region M1S35_12455 PF03412 Peptidase C39 family M1S35_12455 PF00005 ABC transporter M1S35_12460 PF02321 Outer membrane efflux protein M1S35_12465 PF00005 ABC transporter M1S35_12465 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S35_12470 PF03968 OstA-like protein M1S35_12485 PF00571 CBS domain M1S35_12485 PF01380 SIS domain M1S35_12490 PF09190 DALR domain M1S35_12490 PF01406 tRNA synthetases class I (C) catalytic domain M1S35_12515 PF01638 HxlR-like helix-turn-helix M1S35_12520 PF07690 Major Facilitator Superfamily M1S35_12545 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S35_12545 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S35_12555 PF00313 'Cold-shock' DNA-binding domain M1S35_12560 PF01810 LysE type translocator M1S35_12590 PF02601 Exonuclease VII, large subunit M1S35_12590 PF13742 OB-fold nucleic acid binding domain M1S35_12625 PF09278 MerR, DNA binding M1S35_12625 PF00376 MerR family regulatory protein M1S35_12630 PF00403 Heavy-metal-associated domain M1S35_12635 PF00403 Heavy-metal-associated domain M1S35_12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_12640 PF03466 LysR substrate binding domain M1S35_12650 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S35_12650 PF00355 Rieske [2Fe-2S] domain M1S35_12655 PF00866 Ring hydroxylating beta subunit M1S35_12660 PF00175 Oxidoreductase NAD-binding domain M1S35_12660 PF00970 Oxidoreductase FAD-binding domain M1S35_12660 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S35_12665 PF00106 short chain dehydrogenase M1S35_12670 PF03594 Benzoate membrane transport protein M1S35_12675 PF07690 Major Facilitator Superfamily M1S35_12685 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S35_12685 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S35_12690 PF11898 Domain of unknown function (DUF3418) M1S35_12690 PF04408 Helicase associated domain (HA2) M1S35_12690 PF00270 DEAD/DEAH box helicase M1S35_12690 PF00271 Helicase conserved C-terminal domain M1S35_12690 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S35_12695 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S35_12695 PF00578 AhpC/TSA family M1S35_12715 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_12715 PF13192 Thioredoxin domain M1S35_12725 PF02798 Glutathione S-transferase, N-terminal domain M1S35_12725 PF00043 Glutathione S-transferase, C-terminal domain M1S35_12735 PF02390 Putative methyltransferase M1S35_12740 PF13417 Glutathione S-transferase, N-terminal domain M1S35_12740 PF00043 Glutathione S-transferase, C-terminal domain M1S35_12750 PF13488 Glycine zipper M1S35_12750 PF00691 OmpA family M1S35_12755 PF01979 Amidohydrolase family M1S35_12760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S35_12760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S35_12770 PF10672 S-adenosylmethionine-dependent methyltransferase M1S35_12770 PF02926 THUMP domain M1S35_12770 PF01170 Putative RNA methylase family UPF0020 M1S35_12785 PF00004 ATPase family associated with various cellular activities (AAA) M1S35_12785 PF10431 C-terminal, D2-small domain, of ClpB protein M1S35_12785 PF17871 AAA lid domain M1S35_12785 PF02861 Clp amino terminal domain, pathogenicity island component M1S35_12785 PF07724 AAA domain (Cdc48 subfamily) M1S35_12800 PF02566 OsmC-like protein M1S35_12810 PF00027 Cyclic nucleotide-binding domain M1S35_12810 PF13545 Crp-like helix-turn-helix domain M1S35_12820 PF00248 Aldo/keto reductase family M1S35_12835 PF00709 Adenylosuccinate synthetase M1S35_12840 PF13393 Histidyl-tRNA synthetase M1S35_12845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S35_12845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S35_12850 PF02272 DHHA1 domain M1S35_12850 PF01411 tRNA synthetases class II (A) M1S35_12850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S35_12855 PF13840 ACT domain M1S35_12855 PF01842 ACT domain M1S35_12855 PF00696 Amino acid kinase family M1S35_12860 PF02599 Global regulator protein family M1S35_12865 PF01351 Ribonuclease HII M1S35_12875 PF01292 Prokaryotic cytochrome b561 M1S35_12880 PF00962 Adenosine/AMP deaminase M1S35_12885 PF00860 Permease family M1S35_12895 PF00743 Flavin-binding monooxygenase-like M1S35_12900 PF00106 short chain dehydrogenase M1S35_12910 PF02678 Pirin M1S35_12910 PF17954 Quercetinase C-terminal cupin domain M1S35_12915 PF17932 Tetracyclin repressor-like, C-terminal domain M1S35_12915 PF00440 Bacterial regulatory proteins, tetR family M1S35_12925 PF00106 short chain dehydrogenase M1S35_12935 PF13610 DDE domain M1S35_12945 PF13610 DDE domain M1S35_12965 PF00809 Pterin binding enzyme M1S35_12970 PF00893 Small Multidrug Resistance protein M1S35_12990 PF00583 Acetyltransferase (GNAT) family M1S35_12995 PF00589 Phage integrase family M1S35_12995 PF13495 Phage integrase, N-terminal SAM-like domain M1S35_13005 PF11809 Domain of unknown function (DUF3330) M1S35_13005 PF00563 EAL domain M1S35_13015 PF13610 DDE domain M1S35_13020 PF01636 Phosphotransferase enzyme family M1S35_13035 PF13610 DDE domain M1S35_13040 PF02796 Helix-turn-helix domain of resolvase M1S35_13040 PF00239 Resolvase, N terminal domain M1S35_13050 PF13610 DDE domain M1S35_13060 PF02796 Helix-turn-helix domain of resolvase M1S35_13060 PF00239 Resolvase, N terminal domain M1S35_13065 PF13610 DDE domain M1S35_13080 PF00583 Acetyltransferase (GNAT) family M1S35_13085 PF00589 Phage integrase family M1S35_13085 PF13495 Phage integrase, N-terminal SAM-like domain M1S35_13095 PF00563 EAL domain M1S35_13095 PF11809 Domain of unknown function (DUF3330) M1S35_13105 PF13610 DDE domain M1S35_13110 PF01636 Phosphotransferase enzyme family M1S35_13125 PF13610 DDE domain M1S35_13130 PF00239 Resolvase, N terminal domain M1S35_13130 PF02796 Helix-turn-helix domain of resolvase M1S35_13140 PF13610 DDE domain M1S35_13150 PF00239 Resolvase, N terminal domain M1S35_13150 PF02796 Helix-turn-helix domain of resolvase M1S35_13155 PF13610 DDE domain M1S35_13170 PF00583 Acetyltransferase (GNAT) family M1S35_13175 PF13495 Phage integrase, N-terminal SAM-like domain M1S35_13175 PF00589 Phage integrase family M1S35_13185 PF00563 EAL domain M1S35_13185 PF11809 Domain of unknown function (DUF3330) M1S35_13195 PF13610 DDE domain M1S35_13200 PF01636 Phosphotransferase enzyme family M1S35_13215 PF13610 DDE domain M1S35_13220 PF00239 Resolvase, N terminal domain M1S35_13220 PF02796 Helix-turn-helix domain of resolvase M1S35_13230 PF13610 DDE domain M1S35_13240 PF02796 Helix-turn-helix domain of resolvase M1S35_13240 PF00239 Resolvase, N terminal domain M1S35_13245 PF13610 DDE domain M1S35_13255 PF04958 Arginine N-succinyltransferase beta subunit M1S35_13260 PF00202 Aminotransferase class-III M1S35_13270 PF00171 Aldehyde dehydrogenase family M1S35_13280 PF00392 Bacterial regulatory proteins, gntR family M1S35_13280 PF07729 FCD domain M1S35_13290 PF00324 Amino acid permease M1S35_13295 PF01266 FAD dependent oxidoreductase M1S35_13300 PF00324 Amino acid permease M1S35_13340 PF03527 RHS protein M1S35_13340 PF05593 RHS Repeat M1S35_13345 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S35_13345 PF04717 Type VI secretion system, phage-baseplate injector M1S35_13345 PF13296 Putative type VI secretion system Rhs element Vgr M1S35_13365 PF03180 NLPA lipoprotein M1S35_13370 PF05987 Bacterial protein of unknown function (DUF898) M1S35_13385 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_13385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S35_13390 PF00764 Arginosuccinate synthase M1S35_13395 PF01590 GAF domain M1S35_13395 PF00360 Phytochrome region M1S35_13395 PF00563 EAL domain M1S35_13395 PF00990 Diguanylate cyclase, GGDEF domain M1S35_13400 PF01979 Amidohydrolase family M1S35_13405 PF00929 Exonuclease M1S35_13415 PF07715 TonB-dependent Receptor Plug Domain M1S35_13415 PF00593 TonB dependent receptor M1S35_13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_13420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S35_13425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S35_13425 PF00005 ABC transporter M1S35_13430 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_13430 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S35_13435 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_13440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S35_13445 PF01476 LysM domain M1S35_13445 PF01464 Transglycosylase SLT domain M1S35_13445 PF01476 LysM domain M1S35_13445 PF01464 Transglycosylase SLT domain M1S35_13450 PF00929 Exonuclease M1S35_13460 PF00293 NUDIX domain M1S35_13460 PF09297 NADH pyrophosphatase zinc ribbon domain M1S35_13470 PF04972 BON domain M1S35_13475 PF02021 Uncharacterised protein family UPF0102 M1S35_13480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S35_13490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_13490 PF03466 LysR substrate binding domain M1S35_13495 PF01810 LysE type translocator M1S35_13505 PF13411 MerR HTH family regulatory protein M1S35_13515 PF01494 FAD binding domain M1S35_13520 PF01494 FAD binding domain M1S35_13525 PF05195 Aminopeptidase P, N-terminal domain M1S35_13525 PF00557 Metallopeptidase family M24 M1S35_13610 PF01551 Peptidase family M23 M1S35_13610 PF10145 Phage-related minor tail protein M1S35_13610 PF01464 Transglycosylase SLT domain M1S35_13670 PF04860 Phage portal protein M1S35_13755 PF03796 DnaB-like helicase C terminal domain M1S35_13755 PF00772 DnaB-like helicase N terminal domain M1S35_13835 PF08019 Phosphoethanolamine transferase EptA/EptB M1S35_13835 PF00884 Sulfatase M1S35_13880 PF01476 LysM domain M1S35_13880 PF08525 Opacity-associated protein A N-terminal motif M1S35_13880 PF01551 Peptidase family M23 M1S35_14205 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S35_14210 PF00691 OmpA family M1S35_14210 PF04355 SmpA / OmlA family M1S35_14215 PF13018 Extended Signal Peptide of Type V secretion system M1S35_14215 PF03895 YadA-like membrane anchor domain M1S35_14215 PF05658 Head domain of trimeric autotransporter adhesin M1S35_14215 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S35_14220 PF00004 ATPase family associated with various cellular activities (AAA) M1S35_14220 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S35_14220 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S35_14225 PF02590 Predicted SPOUT methyltransferase M1S35_14230 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S35_14240 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S35_14240 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S35_14245 PF04060 Putative Fe-S cluster M1S35_14250 PF10576 Iron-sulfur binding domain of endonuclease III M1S35_14250 PF00633 Helix-hairpin-helix motif M1S35_14250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S35_14260 PF05191 Adenylate kinase, active site lid M1S35_14275 PF03717 Penicillin-binding Protein dimerisation domain M1S35_14275 PF00905 Penicillin binding protein transpeptidase domain M1S35_14290 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S35_14295 PF01730 UreF M1S35_14300 PF05194 UreE urease accessory protein, C-terminal domain M1S35_14300 PF02814 UreE urease accessory protein, N-terminal domain M1S35_14305 PF01979 Amidohydrolase family M1S35_14305 PF00449 Urease alpha-subunit, N-terminal domain M1S35_14310 PF00699 Urease beta subunit M1S35_14315 PF00547 Urease, gamma subunit M1S35_14320 PF01774 UreD urease accessory protein M1S35_14335 PF00463 Isocitrate lyase family M1S35_14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_14340 PF03466 LysR substrate binding domain M1S35_14345 PF00571 CBS domain M1S35_14345 PF03471 Transporter associated domain M1S35_14345 PF01595 Cyclin M transmembrane N-terminal domain M1S35_14350 PF03600 Citrate transporter M1S35_14365 PF00009 Elongation factor Tu GTP binding domain M1S35_14370 PF01507 Phosphoadenosine phosphosulfate reductase family M1S35_14380 PF14052 Capsule assembly protein Wzi M1S35_14385 PF00152 tRNA synthetases class II (D, K and N) M1S35_14385 PF01336 OB-fold nucleic acid binding domain M1S35_14400 PF00301 Rubredoxin M1S35_14405 PF18113 Rubredoxin binding C-terminal domain M1S35_14405 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_14410 PF00561 alpha/beta hydrolase fold M1S35_14415 PF03466 LysR substrate binding domain M1S35_14415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_14425 PF13089 Polyphosphate kinase N-terminal domain M1S35_14425 PF17941 Polyphosphate kinase C-terminal domain 1 M1S35_14425 PF13090 Polyphosphate kinase C-terminal domain 2 M1S35_14425 PF02503 Polyphosphate kinase middle domain M1S35_14430 PF00912 Transglycosylase M1S35_14435 PF01694 Rhomboid family M1S35_14445 PF00005 ABC transporter M1S35_14450 PF13472 GDSL-like Lipase/Acylhydrolase family M1S35_14455 PF00484 Carbonic anhydrase M1S35_14460 PF00561 alpha/beta hydrolase fold M1S35_14470 PF07715 TonB-dependent Receptor Plug Domain M1S35_14470 PF00593 TonB dependent receptor M1S35_14475 PF01106 NifU-like domain M1S35_14475 PF01521 Iron-sulphur cluster biosynthesis M1S35_14485 PF00884 Sulfatase M1S35_14490 PF03781 Sulfatase-modifying factor enzyme 1 M1S35_14505 PF00291 Pyridoxal-phosphate dependent enzyme M1S35_14510 PF01384 Phosphate transporter family M1S35_14515 PF02310 B12 binding domain M1S35_14515 PF02607 B12 binding domain M1S35_14515 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S35_14515 PF00809 Pterin binding enzyme M1S35_14515 PF02574 Homocysteine S-methyltransferase M1S35_14520 PF02779 Transketolase, pyrimidine binding domain M1S35_14520 PF02780 Transketolase, C-terminal domain M1S35_14525 PF00456 Transketolase, thiamine diphosphate binding domain M1S35_14530 PF07690 Major Facilitator Superfamily M1S35_14540 PF03466 LysR substrate binding domain M1S35_14540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_14550 PF01263 Aldose 1-epimerase M1S35_14555 PF07690 Major Facilitator Superfamily M1S35_14560 PF02311 AraC-like ligand binding domain M1S35_14560 PF12833 Helix-turn-helix domain M1S35_14565 PF04960 Glutaminase M1S35_14570 PF01327 Polypeptide deformylase M1S35_14575 PF07690 Major Facilitator Superfamily M1S35_14585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S35_14585 PF00205 Thiamine pyrophosphate enzyme, central domain M1S35_14585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S35_14590 PF00171 Aldehyde dehydrogenase family M1S35_14595 PF01958 Domain of unknown function DUF108 M1S35_14595 PF03447 Homoserine dehydrogenase, NAD binding domain M1S35_14605 PF12697 Alpha/beta hydrolase family M1S35_14615 PF07690 Major Facilitator Superfamily M1S35_14620 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_14620 PF14759 Reductase C-terminal M1S35_14625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S35_14635 PF00355 Rieske [2Fe-2S] domain M1S35_14645 PF00355 Rieske [2Fe-2S] domain M1S35_14650 PF01614 Bacterial transcriptional regulator M1S35_14650 PF09339 IclR helix-turn-helix domain M1S35_14665 PF00378 Enoyl-CoA hydratase/isomerase M1S35_14675 PF00535 Glycosyl transferase family 2 M1S35_14680 PF01522 Polysaccharide deacetylase M1S35_14680 PF14883 Hypothetical glycosyl hydrolase family 13 M1S35_14685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S35_14690 PF07152 YaeQ protein M1S35_14695 PF00375 Sodium:dicarboxylate symporter family M1S35_14700 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S35_14700 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S35_14710 PF03061 Thioesterase superfamily M1S35_14720 PF02028 BCCT, betaine/carnitine/choline family transporter M1S35_14725 PF02028 BCCT, betaine/carnitine/choline family transporter M1S35_14730 PF13977 BetI-type transcriptional repressor, C-terminal M1S35_14730 PF00440 Bacterial regulatory proteins, tetR family M1S35_14735 PF00171 Aldehyde dehydrogenase family M1S35_14740 PF05199 GMC oxidoreductase M1S35_14740 PF00732 GMC oxidoreductase M1S35_14745 PF06039 Malate:quinone oxidoreductase (Mqo) M1S35_14755 PF02574 Homocysteine S-methyltransferase M1S35_14760 PF13520 Amino acid permease M1S35_14785 PF00701 Dihydrodipicolinate synthetase family M1S35_14790 PF00083 Sugar (and other) transporter M1S35_14910 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S35_14910 PF02767 DNA polymerase III beta subunit, central domain M1S35_14910 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S35_14950 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S35_15100 PF07007 Lysozyme inhibitor LprI M1S35_15110 PF00929 Exonuclease M1S35_15185 PF07690 Major Facilitator Superfamily M1S35_15190 PF13533 Biotin-lipoyl like M1S35_15195 PF03061 Thioesterase superfamily M1S35_15200 PF00490 Delta-aminolevulinic acid dehydratase M1S35_15205 PF01266 FAD dependent oxidoreductase M1S35_15210 PF08338 Domain of unknown function (DUF1731) M1S35_15210 PF01370 NAD dependent epimerase/dehydratase family M1S35_15230 PF00149 Calcineurin-like phosphoesterase M1S35_15230 PF12320 Type 5 capsule protein repressor C-terminal domain M1S35_15240 PF01168 Alanine racemase, N-terminal domain M1S35_15245 PF00437 Type II/IV secretion system protein M1S35_15250 PF00437 Type II/IV secretion system protein M1S35_15255 PF01475 Ferric uptake regulator family M1S35_15260 PF04355 SmpA / OmlA family M1S35_15265 PF03658 RnfH family Ubiquitin M1S35_15275 PF01814 Hemerythrin HHE cation binding domain M1S35_15280 PF13230 Glutamine amidotransferases class-II M1S35_15290 PF00696 Amino acid kinase family M1S35_15295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S35_15295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S35_15295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S35_15295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S35_15300 PF00692 dUTPase M1S35_15305 PF00580 UvrD/REP helicase N-terminal domain M1S35_15305 PF13361 UvrD-like helicase C-terminal domain M1S35_15310 PF00691 OmpA family M1S35_15310 PF13488 Glycine zipper M1S35_15315 PF01553 Acyltransferase M1S35_15325 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S35_15330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S35_15335 PF03776 Septum formation topological specificity factor MinE M1S35_15350 PF01810 LysE type translocator M1S35_15355 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S35_15355 PF17854 FtsK alpha domain M1S35_15355 PF09397 Ftsk gamma domain M1S35_15355 PF01580 FtsK/SpoIIIE family M1S35_15360 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S35_15365 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S35_15370 PF04377 Arginine-tRNA-protein transferase, C terminus M1S35_15370 PF04376 Arginine-tRNA-protein transferase, N terminus M1S35_15375 PF00583 Acetyltransferase (GNAT) family M1S35_15390 PF03144 Elongation factor Tu domain 2 M1S35_15390 PF03143 Elongation factor Tu C-terminal domain M1S35_15390 PF00009 Elongation factor Tu GTP binding domain M1S35_15395 PF00679 Elongation factor G C-terminus M1S35_15395 PF03764 Elongation factor G, domain IV M1S35_15395 PF00009 Elongation factor Tu GTP binding domain M1S35_15395 PF03144 Elongation factor Tu domain 2 M1S35_15395 PF14492 Elongation Factor G, domain II M1S35_15400 PF00177 Ribosomal protein S7p/S5e M1S35_15405 PF00164 Ribosomal protein S12/S23 M1S35_15415 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S35_15415 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S35_15420 PF03653 Uncharacterised protein family (UPF0093) M1S35_15425 PF02678 Pirin M1S35_15425 PF05726 Pirin C-terminal cupin domain M1S35_15435 PF02540 NAD synthase M1S35_15435 PF00795 Carbon-nitrogen hydrolase M1S35_15450 PF00175 Oxidoreductase NAD-binding domain M1S35_15450 PF00970 Oxidoreductase FAD-binding domain M1S35_15450 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S35_15455 PF00171 Aldehyde dehydrogenase family M1S35_15460 PF00355 Rieske [2Fe-2S] domain M1S35_15460 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S35_15465 PF07859 alpha/beta hydrolase fold M1S35_15470 PF02028 BCCT, betaine/carnitine/choline family transporter M1S35_15475 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S35_15480 PF03466 LysR substrate binding domain M1S35_15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_15500 PF00037 4Fe-4S binding domain M1S35_15505 PF01467 Cytidylyltransferase-like M1S35_15510 PF01668 SmpB protein M1S35_15515 PF03358 NADPH-dependent FMN reductase M1S35_15520 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S35_15525 PF01479 S4 domain M1S35_15525 PF00849 RNA pseudouridylate synthase M1S35_15530 PF13525 Outer membrane lipoprotein M1S35_15535 PF08278 DNA primase DnaG DnaB-binding M1S35_15535 PF08275 DNA primase catalytic core, N-terminal domain M1S35_15535 PF01807 CHC2 zinc finger M1S35_15535 PF10410 DnaB-helicase binding domain of primase M1S35_15540 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S35_15540 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S35_15540 PF01488 Shikimate / quinate 5-dehydrogenase M1S35_15550 PF03550 Outer membrane lipoprotein LolB M1S35_15555 PF08544 GHMP kinases C terminal M1S35_15555 PF00288 GHMP kinases N terminal domain M1S35_15580 PF14572 Phosphoribosyl synthetase-associated domain M1S35_15580 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S35_15585 PF01386 Ribosomal L25p family M1S35_15590 PF01195 Peptidyl-tRNA hydrolase M1S35_15595 PF02261 Aspartate decarboxylase M1S35_15610 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S35_15620 PF02581 Thiamine monophosphate synthase M1S35_15620 PF03070 TENA/THI-4/PQQC family M1S35_15620 PF08543 Phosphomethylpyrimidine kinase M1S35_15625 PF04972 BON domain M1S35_15625 PF01476 LysM domain M1S35_15630 PF00550 Phosphopantetheine attachment site M1S35_15640 PF00698 Acyl transferase domain M1S35_15645 PF01783 Ribosomal L32p protein family M1S35_15650 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S35_15655 PF04315 Elongation factor P hydroxylase M1S35_15660 PF01300 Telomere recombination M1S35_15665 PF02616 Segregation and condensation protein ScpA M1S35_15670 PF04079 Segregation and condensation complex subunit ScpB M1S35_15675 PF01479 S4 domain M1S35_15675 PF00849 RNA pseudouridylate synthase M1S35_15690 PF00155 Aminotransferase class I and II M1S35_15695 PF00202 Aminotransferase class-III M1S35_15695 PF06968 Biotin and Thiamin Synthesis associated domain M1S35_15695 PF04055 Radical SAM superfamily M1S35_15700 PF12697 Alpha/beta hydrolase family M1S35_15700 PF08241 Methyltransferase domain M1S35_15705 PF02358 Trehalose-phosphatase M1S35_15710 PF00982 Glycosyltransferase family 20 M1S35_15715 PF07690 Major Facilitator Superfamily M1S35_15720 PF00210 Ferritin-like domain M1S35_15725 PF00533 BRCA1 C Terminus (BRCT) domain M1S35_15725 PF03120 NAD-dependent DNA ligase OB-fold domain M1S35_15725 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S35_15725 PF12826 Helix-hairpin-helix motif M1S35_15725 PF01653 NAD-dependent DNA ligase adenylation domain M1S35_15735 PF06470 SMC proteins Flexible Hinge Domain M1S35_15735 PF02463 RecF/RecN/SMC N terminal domain M1S35_15745 PF01925 Sulfite exporter TauE/SafE M1S35_15755 PF03309 Type III pantothenate kinase M1S35_15760 PF00448 SRP54-type protein, GTPase domain M1S35_15760 PF02881 SRP54-type protein, helical bundle domain M1S35_15760 PF02978 Signal peptide binding domain M1S35_15770 PF01207 Dihydrouridine synthase (Dus) M1S35_15800 PF00692 dUTPase M1S35_15815 PF01048 Phosphorylase superfamily M1S35_15820 PF10609 NUBPL iron-transfer P-loop NTPase M1S35_15830 PF01588 Putative tRNA binding domain M1S35_15830 PF09334 tRNA synthetases class I (M) M1S35_15855 PF13533 Biotin-lipoyl like M1S35_15860 PF00291 Pyridoxal-phosphate dependent enzyme M1S35_15875 PF05552 Conserved TM helix M1S35_15890 PF00175 Oxidoreductase NAD-binding domain M1S35_15890 PF00970 Oxidoreductase FAD-binding domain M1S35_15895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_15895 PF03466 LysR substrate binding domain M1S35_15900 PF00313 'Cold-shock' DNA-binding domain M1S35_15910 PF00361 Proton-conducting membrane transporter M1S35_15915 PF00361 Proton-conducting membrane transporter M1S35_15920 PF00361 Proton-conducting membrane transporter M1S35_15920 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S35_15925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S35_15930 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S35_15935 PF12838 4Fe-4S dicluster domain M1S35_15940 PF00146 NADH dehydrogenase M1S35_15945 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S35_15945 PF00384 Molybdopterin oxidoreductase M1S35_15945 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S35_15950 PF10531 SLBB domain M1S35_15950 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S35_15950 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S35_15960 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S35_15960 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S35_15965 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S35_15970 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S35_15975 PF00990 Diguanylate cyclase, GGDEF domain M1S35_15975 PF17151 Periplasmic sensor domain M1S35_15985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_15985 PF00672 HAMP domain M1S35_15985 PF00512 His Kinase A (phospho-acceptor) domain M1S35_15990 PF00072 Response regulator receiver domain M1S35_15990 PF00486 Transcriptional regulatory protein, C terminal M1S35_16000 PF03477 ATP cone domain M1S35_16000 PF02867 Ribonucleotide reductase, barrel domain M1S35_16000 PF00317 Ribonucleotide reductase, all-alpha domain M1S35_16010 PF00268 Ribonucleotide reductase, small chain M1S35_16020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_16020 PF00512 His Kinase A (phospho-acceptor) domain M1S35_16020 PF00672 HAMP domain M1S35_16020 PF13756 Stimulus-sensing domain M1S35_16020 PF13755 Sensor N-terminal transmembrane domain M1S35_16090 PF01011 PQQ enzyme repeat M1S35_16090 PF13360 PQQ-like domain M1S35_16115 PF02567 Phenazine biosynthesis-like protein M1S35_16140 PF01613 Flavin reductase like domain M1S35_16145 PF08267 Cobalamin-independent synthase, N-terminal domain M1S35_16145 PF01717 Cobalamin-independent synthase, Catalytic domain M1S35_16155 PF03466 LysR substrate binding domain M1S35_16155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_16160 PF01810 LysE type translocator M1S35_16170 PF12833 Helix-turn-helix domain M1S35_16170 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S35_16175 PF07687 Peptidase dimerisation domain M1S35_16175 PF01546 Peptidase family M20/M25/M40 M1S35_16185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_16185 PF03466 LysR substrate binding domain M1S35_16190 PF07690 Major Facilitator Superfamily M1S35_16200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_16200 PF03466 LysR substrate binding domain M1S35_16205 PF14537 Cytochrome c3 M1S35_16205 PF00890 FAD binding domain M1S35_16215 PF02515 CoA-transferase family III M1S35_16220 PF07690 Major Facilitator Superfamily M1S35_16225 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_16225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_16225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_16230 PF03466 LysR substrate binding domain M1S35_16230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_16235 PF00107 Zinc-binding dehydrogenase M1S35_16235 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_16240 PF00962 Adenosine/AMP deaminase M1S35_16265 PF02445 Quinolinate synthetase A protein M1S35_16270 PF01960 ArgJ family M1S35_16275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S35_16275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S35_16280 PF00893 Small Multidrug Resistance protein M1S35_16290 PF05275 Copper resistance protein B precursor (CopB) M1S35_16295 PF00394 Multicopper oxidase M1S35_16295 PF07731 Multicopper oxidase M1S35_16295 PF07732 Multicopper oxidase M1S35_16310 PF00834 Ribulose-phosphate 3 epimerase family M1S35_16320 PF00756 Putative esterase M1S35_16330 PF04445 Putative SAM-dependent methyltransferase M1S35_16335 PF00814 Glycoprotease family M1S35_16340 PF00132 Bacterial transferase hexapeptide (six repeats) M1S35_16345 PF00293 NUDIX domain M1S35_16385 PF04715 Anthranilate synthase component I, N terminal region M1S35_16385 PF00425 chorismate binding enzyme M1S35_16390 PF00155 Aminotransferase class I and II M1S35_16395 PF00815 Histidinol dehydrogenase M1S35_16400 PF01634 ATP phosphoribosyltransferase M1S35_16405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S35_16410 PF01722 BolA-like protein M1S35_16415 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S35_16420 PF04963 Sigma-54 factor, core binding domain M1S35_16420 PF04552 Sigma-54, DNA binding domain M1S35_16420 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S35_16465 PF00795 Carbon-nitrogen hydrolase M1S35_16475 PF01047 MarR family M1S35_16480 PF02566 OsmC-like protein M1S35_16485 PF00437 Type II/IV secretion system protein M1S35_16505 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S35_16505 PF00476 DNA polymerase family A M1S35_16505 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S35_16505 PF01612 3'-5' exonuclease M1S35_16510 PF02325 YGGT family M1S35_16515 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S35_16515 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S35_16520 PF01171 PP-loop family M1S35_16520 PF09179 TilS substrate binding domain M1S35_16520 PF11734 TilS substrate C-terminal domain M1S35_16525 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S35_16530 PF02541 Ppx/GppA phosphatase family M1S35_16535 PF00085 Thioredoxin M1S35_16540 PF07497 Rho termination factor, RNA-binding domain M1S35_16540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S35_16540 PF07498 Rho termination factor, N-terminal domain M1S35_16555 PF00216 Bacterial DNA-binding protein M1S35_16560 PF03483 B3/4 domain M1S35_16560 PF03484 tRNA synthetase B5 domain M1S35_16560 PF03147 Ferredoxin-fold anticodon binding domain M1S35_16560 PF01588 Putative tRNA binding domain M1S35_16560 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S35_16565 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S35_16565 PF01409 tRNA synthetases class II core domain (F) M1S35_16585 PF00453 Ribosomal protein L20 M1S35_16590 PF01632 Ribosomal protein L35 M1S35_16600 PF07690 Major Facilitator Superfamily M1S35_16605 PF09335 SNARE associated Golgi protein M1S35_16610 PF00043 Glutathione S-transferase, C-terminal domain M1S35_16610 PF02798 Glutathione S-transferase, N-terminal domain M1S35_16615 PF00707 Translation initiation factor IF-3, C-terminal domain M1S35_16615 PF05198 Translation initiation factor IF-3, N-terminal domain M1S35_16620 PF03129 Anticodon binding domain M1S35_16620 PF02824 TGS domain M1S35_16620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S35_16620 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S35_16625 PF00501 AMP-binding enzyme M1S35_16625 PF13193 AMP-binding enzyme C-terminal domain M1S35_16630 PF04751 Protein of unknown function (DUF615) M1S35_16635 PF00381 PTS HPr component phosphorylation site M1S35_16640 PF03668 P-loop ATPase protein family M1S35_16645 PF02569 Pantoate-beta-alanine ligase M1S35_16650 PF02548 Ketopantoate hydroxymethyltransferase M1S35_16655 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S35_16660 PF01743 Poly A polymerase head domain M1S35_16660 PF12626 Polymerase A arginine-rich C-terminus M1S35_16660 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S35_16670 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S35_16680 PF13291 ACT domain M1S35_16680 PF04607 Region found in RelA / SpoT proteins M1S35_16680 PF02824 TGS domain M1S35_16685 PF05958 tRNA (Uracil-5-)-methyltransferase M1S35_16695 PF00291 Pyridoxal-phosphate dependent enzyme M1S35_16700 PF00672 HAMP domain M1S35_16700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_16700 PF00512 His Kinase A (phospho-acceptor) domain M1S35_16700 PF00072 Response regulator receiver domain M1S35_16700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S35_16700 PF01627 Hpt domain M1S35_16705 PF00378 Enoyl-CoA hydratase/isomerase M1S35_16710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S35_16710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S35_16715 PF01261 Xylose isomerase-like TIM barrel M1S35_16725 PF00106 short chain dehydrogenase M1S35_16730 PF02233 NAD(P) transhydrogenase beta subunit M1S35_16735 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S35_16740 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S35_16740 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S35_16745 PF00892 EamA-like transporter family M1S35_16755 PF07690 Major Facilitator Superfamily M1S35_16760 PF01207 Dihydrouridine synthase (Dus) M1S35_16770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_16770 PF03466 LysR substrate binding domain M1S35_16780 PF00899 ThiF family M1S35_16790 PF00330 Aconitase family (aconitate hydratase) M1S35_16790 PF00694 Aconitase C-terminal domain M1S35_16795 PF01026 TatD related DNase M1S35_16810 PF00009 Elongation factor Tu GTP binding domain M1S35_16810 PF03144 Elongation factor Tu domain 2 M1S35_16810 PF16658 Class II release factor RF3, C-terminal domain M1S35_16830 PF03707 Bacterial signalling protein N terminal repeat M1S35_16830 PF00563 EAL domain M1S35_16830 PF00990 Diguanylate cyclase, GGDEF domain M1S35_16835 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S35_16835 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S35_16840 PF10369 Small subunit of acetolactate synthase M1S35_16845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S35_16845 PF00205 Thiamine pyrophosphate enzyme, central domain M1S35_16845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S35_16855 PF08264 Anticodon-binding domain of tRNA M1S35_16855 PF00133 tRNA synthetases class I (I, L, M and V) M1S35_16855 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S35_16855 PF09334 tRNA synthetases class I (M) M1S35_16870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S35_16875 PF12704 MacB-like periplasmic core domain M1S35_16875 PF02687 FtsX-like permease family M1S35_16875 PF00005 ABC transporter M1S35_16880 PF02321 Outer membrane efflux protein M1S35_16895 PF00929 Exonuclease M1S35_16900 PF03193 RsgA GTPase M1S35_16910 PF00462 Glutaredoxin M1S35_16915 PF02556 Preprotein translocase subunit SecB M1S35_16930 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S35_16930 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S35_16945 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S35_16945 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S35_16955 PF04820 Tryptophan halogenase M1S35_16975 PF00221 Aromatic amino acid lyase M1S35_16990 PF13193 AMP-binding enzyme C-terminal domain M1S35_16990 PF00501 AMP-binding enzyme M1S35_17000 PF00550 Phosphopantetheine attachment site M1S35_17005 PF00550 Phosphopantetheine attachment site M1S35_17020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S35_17020 PF01926 50S ribosome-binding GTPase M1S35_17025 PF13360 PQQ-like domain M1S35_17035 PF03129 Anticodon binding domain M1S35_17035 PF13393 Histidyl-tRNA synthetase M1S35_17040 PF04551 GcpE protein M1S35_17045 PF13464 Domain of unknown function (DUF4115) M1S35_17055 PF04055 Radical SAM superfamily M1S35_17060 PF00334 Nucleoside diphosphate kinase M1S35_17065 PF04384 Iron-sulphur cluster assembly M1S35_17070 PF01569 PAP2 superfamily M1S35_17075 PF00534 Glycosyl transferases group 1 M1S35_17075 PF13439 Glycosyltransferase Family 4 M1S35_17080 PF17804 Tail specific protease N-terminal domain M1S35_17080 PF03572 Peptidase family S41 M1S35_17080 PF00595 PDZ domain M1S35_17080 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S35_17085 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S35_17095 PF00561 alpha/beta hydrolase fold M1S35_17100 PF00171 Aldehyde dehydrogenase family M1S35_17105 PF00171 Aldehyde dehydrogenase family M1S35_17110 PF01202 Shikimate kinase M1S35_17115 PF02447 GntP family permease M1S35_17120 PF01081 KDPG and KHG aldolase M1S35_17125 PF00920 Dehydratase family M1S35_17130 PF00871 Acetokinase family M1S35_17135 PF07085 DRTGG domain M1S35_17135 PF01515 Phosphate acetyl/butaryl transferase M1S35_17140 PF05681 Fumarate hydratase (Fumerase) M1S35_17140 PF05683 Fumarase C-terminus M1S35_17155 PF07724 AAA domain (Cdc48 subfamily) M1S35_17155 PF10431 C-terminal, D2-small domain, of ClpB protein M1S35_17155 PF06689 ClpX C4-type zinc finger M1S35_17160 PF00574 Clp protease M1S35_17165 PF05697 Bacterial trigger factor protein (TF) M1S35_17165 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S35_17165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S35_17170 PF00593 TonB dependent receptor M1S35_17170 PF07715 TonB-dependent Receptor Plug Domain M1S35_17175 PF18331 PKHD-type hydroxylase C-terminal domain M1S35_17175 PF13640 2OG-Fe(II) oxygenase superfamily M1S35_17180 PF00682 HMGL-like M1S35_17180 PF08502 LeuA allosteric (dimerisation) domain M1S35_17185 PF00561 alpha/beta hydrolase fold M1S35_17190 PF07021 Methionine biosynthesis protein MetW M1S35_17190 PF00561 alpha/beta hydrolase fold M1S35_17200 PF01725 Ham1 family M1S35_17210 PF02416 mttA/Hcf106 family M1S35_17215 PF02416 mttA/Hcf106 family M1S35_17220 PF00902 Sec-independent protein translocase protein (TatC) M1S35_17240 PF01790 Prolipoprotein diacylglyceryl transferase M1S35_17255 PF00303 Thymidylate synthase M1S35_17260 PF00186 Dihydrofolate reductase M1S35_17270 PF01625 Peptide methionine sulfoxide reductase M1S35_17280 PF01618 MotA/TolQ/ExbB proton channel family M1S35_17290 PF01842 ACT domain M1S35_17290 PF00551 Formyl transferase M1S35_17300 PF00171 Aldehyde dehydrogenase family M1S35_17305 PF00830 Ribosomal L28 family M1S35_17310 PF00471 Ribosomal protein L33 M1S35_17315 PF00999 Sodium/hydrogen exchanger family M1S35_17315 PF02254 TrkA-N domain M1S35_17335 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S35_17340 PF13361 UvrD-like helicase C-terminal domain M1S35_17340 PF00580 UvrD/REP helicase N-terminal domain M1S35_17355 PF01131 DNA topoisomerase M1S35_17355 PF01396 Topoisomerase DNA binding C4 zinc finger M1S35_17355 PF08272 Topoisomerase I zinc-ribbon-like M1S35_17355 PF01751 Toprim domain M1S35_17365 PF01638 HxlR-like helix-turn-helix M1S35_17370 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_17370 PF00107 Zinc-binding dehydrogenase M1S35_17375 PF04102 SlyX M1S35_17380 PF00005 ABC transporter M1S35_17380 PF16326 ABC transporter C-terminal domain M1S35_17380 PF12848 ABC transporter M1S35_17385 PF01810 LysE type translocator M1S35_17390 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S35_17400 PF00375 Sodium:dicarboxylate symporter family M1S35_17410 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S35_17410 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S35_17430 PF01416 tRNA pseudouridine synthase M1S35_17440 PF01176 Translation initiation factor 1A / IF-1 M1S35_17455 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S35_17465 PF00694 Aconitase C-terminal domain M1S35_17470 PF00330 Aconitase family (aconitate hydratase) M1S35_17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_17480 PF03466 LysR substrate binding domain M1S35_17500 PF00293 NUDIX domain M1S35_17505 PF02896 PEP-utilising enzyme, TIM barrel domain M1S35_17505 PF01590 GAF domain M1S35_17505 PF00391 PEP-utilising enzyme, mobile domain M1S35_17505 PF05524 PEP-utilising enzyme, N-terminal M1S35_17510 PF00141 Peroxidase M1S35_17515 PF12706 Beta-lactamase superfamily domain M1S35_17520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_17520 PF03466 LysR substrate binding domain M1S35_17530 PF02798 Glutathione S-transferase, N-terminal domain M1S35_17535 PF08279 HTH domain M1S35_17535 PF13280 WYL domain M1S35_17540 PF13419 Haloacid dehalogenase-like hydrolase M1S35_17545 PF01479 S4 domain M1S35_17545 PF00849 RNA pseudouridylate synthase M1S35_17550 PF00575 S1 RNA binding domain M1S35_17550 PF12111 Polyribonucleotide phosphorylase C terminal M1S35_17550 PF10150 Ribonuclease E/G family M1S35_17555 PF00501 AMP-binding enzyme M1S35_17555 PF13193 AMP-binding enzyme C-terminal domain M1S35_17570 PF03466 LysR substrate binding domain M1S35_17570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_17575 PF00106 short chain dehydrogenase M1S35_17580 PF06969 HemN C-terminal domain M1S35_17580 PF04055 Radical SAM superfamily M1S35_17590 PF01554 MatE M1S35_17595 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S35_17595 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_17595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_17600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_17600 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S35_17605 PF03109 ABC1 family M1S35_17610 PF01197 Ribosomal protein L31 M1S35_17625 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S35_17645 PF03884 DNA gyrase inhibitor YacG M1S35_17650 PF00753 Metallo-beta-lactamase superfamily M1S35_17655 PF00762 Ferrochelatase M1S35_17665 PF01177 Asp/Glu/Hydantoin racemase M1S35_17680 PF01206 Sulfurtransferase TusA M1S35_17685 PF00571 CBS domain M1S35_17685 PF03471 Transporter associated domain M1S35_17690 PF00795 Carbon-nitrogen hydrolase M1S35_17695 PF01588 Putative tRNA binding domain M1S35_17705 PF08334 Type II secretion system (T2SS), protein G M1S35_17705 PF07963 Prokaryotic N-terminal methylation motif M1S35_17710 PF00482 Type II secretion system (T2SS), protein F M1S35_17715 PF17764 3′ DNA-binding domain (3′BD) M1S35_17715 PF00270 DEAD/DEAH box helicase M1S35_17715 PF18074 Primosomal protein N C-terminal domain M1S35_17715 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S35_17715 PF00271 Helicase conserved C-terminal domain M1S35_17720 PF00999 Sodium/hydrogen exchanger family M1S35_17720 PF02254 TrkA-N domain M1S35_17725 PF01430 Hsp33 protein M1S35_17735 PF00226 DnaJ domain M1S35_17735 PF01556 DnaJ C terminal domain M1S35_17745 PF01544 CorA-like Mg2+ transporter protein M1S35_17750 PF00013 KH domain M1S35_17750 PF01138 3' exoribonuclease family, domain 1 M1S35_17750 PF00575 S1 RNA binding domain M1S35_17750 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S35_17750 PF03725 3' exoribonuclease family, domain 2 M1S35_17755 PF00312 Ribosomal protein S15 M1S35_17760 PF00144 Beta-lactamase M1S35_17765 PF13538 UvrD-like helicase C-terminal domain M1S35_17770 PF12705 PD-(D/E)XK nuclease superfamily M1S35_17770 PF00580 UvrD/REP helicase N-terminal domain M1S35_17770 PF13361 UvrD-like helicase C-terminal domain M1S35_17775 PF17946 RecC C-terminal domain M1S35_17785 PF03976 Polyphosphate kinase 2 (PPK2) M1S35_17795 PF01209 ubiE/COQ5 methyltransferase family M1S35_17805 PF03109 ABC1 family M1S35_17810 PF01494 FAD binding domain M1S35_17815 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S35_17830 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S35_17830 PF13244 Domain of unknown function (DUF4040) M1S35_17830 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S35_17830 PF00361 Proton-conducting membrane transporter M1S35_17835 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S35_17840 PF00361 Proton-conducting membrane transporter M1S35_17845 PF01899 Na+/H+ ion antiporter subunit M1S35_17850 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S35_17855 PF03334 Na+/H+ antiporter subunit M1S35_17860 PF02033 Ribosome-binding factor A M1S35_17865 PF00009 Elongation factor Tu GTP binding domain M1S35_17865 PF11987 Translation-initiation factor 2 M1S35_17865 PF08364 Bacterial translation initiation factor IF-2 associated region M1S35_17865 PF04760 Translation initiation factor IF-2, N-terminal region M1S35_17870 PF13184 NusA-like KH domain M1S35_17870 PF08529 NusA N-terminal domain M1S35_17870 PF00575 S1 RNA binding domain M1S35_17875 PF17384 RimP C-terminal SH3 domain M1S35_17875 PF02576 RimP N-terminal domain M1S35_17895 PF03840 Preprotein translocase SecG subunit M1S35_17900 PF00121 Triosephosphate isomerase M1S35_17905 PF00437 Type II/IV secretion system protein M1S35_17905 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S35_17910 PF00482 Type II secretion system (T2SS), protein F M1S35_17920 PF06750 Bacterial Peptidase A24 N-terminal domain M1S35_17920 PF01478 Type IV leader peptidase family M1S35_17925 PF01121 Dephospho-CoA kinase M1S35_17935 PF00588 SpoU rRNA Methylase family M1S35_17935 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S35_17940 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S35_17950 PF02463 RecF/RecN/SMC N terminal domain M1S35_17955 PF02622 Uncharacterized ACR, COG1678 M1S35_17960 PF03652 Holliday junction resolvase M1S35_17965 PF13533 Biotin-lipoyl like M1S35_17990 PF02805 Metal binding domain of Ada M1S35_17990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S35_17990 PF12833 Helix-turn-helix domain M1S35_17990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S35_17995 PF01066 CDP-alcohol phosphatidyltransferase M1S35_18005 PF08459 UvrC Helix-hairpin-helix N-terminal M1S35_18005 PF01541 GIY-YIG catalytic domain M1S35_18005 PF02151 UvrB/uvrC motif M1S35_18025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S35_18025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S35_18025 PF00378 Enoyl-CoA hydratase/isomerase M1S35_18030 PF02803 Thiolase, C-terminal domain M1S35_18030 PF00108 Thiolase, N-terminal domain M1S35_18050 PF00376 MerR family regulatory protein M1S35_18050 PF09278 MerR, DNA binding M1S35_18060 PF01323 DSBA-like thioredoxin domain M1S35_18075 PF00183 Hsp90 protein M1S35_18075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_18090 PF13726 Na+-H+ antiporter family M1S35_18090 PF03553 Na+/H+ antiporter family M1S35_18095 PF00561 alpha/beta hydrolase fold M1S35_18115 PF04997 RNA polymerase Rpb1, domain 1 M1S35_18115 PF00623 RNA polymerase Rpb1, domain 2 M1S35_18115 PF04983 RNA polymerase Rpb1, domain 3 M1S35_18115 PF05000 RNA polymerase Rpb1, domain 4 M1S35_18115 PF04998 RNA polymerase Rpb1, domain 5 M1S35_18120 PF04560 RNA polymerase Rpb2, domain 7 M1S35_18120 PF00562 RNA polymerase Rpb2, domain 6 M1S35_18120 PF10385 RNA polymerase beta subunit external 1 domain M1S35_18120 PF04561 RNA polymerase Rpb2, domain 2 M1S35_18120 PF04563 RNA polymerase beta subunit M1S35_18120 PF04565 RNA polymerase Rpb2, domain 3 M1S35_18125 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S35_18125 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S35_18130 PF00466 Ribosomal protein L10 M1S35_18135 PF00687 Ribosomal protein L1p/L10e family M1S35_18140 PF00298 Ribosomal protein L11, RNA binding domain M1S35_18140 PF03946 Ribosomal protein L11, N-terminal domain M1S35_18145 PF00467 KOW motif M1S35_18145 PF02357 Transcription termination factor nusG M1S35_18150 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S35_18160 PF00009 Elongation factor Tu GTP binding domain M1S35_18160 PF03143 Elongation factor Tu C-terminal domain M1S35_18160 PF03144 Elongation factor Tu domain 2 M1S35_18185 PF00425 chorismate binding enzyme M1S35_18185 PF04715 Anthranilate synthase component I, N terminal region M1S35_18190 PF13419 Haloacid dehalogenase-like hydrolase M1S35_18195 PF12401 Protein of unknown function (DUF2662) M1S35_18195 PF00498 FHA domain M1S35_18200 PF00263 Bacterial type II and III secretion system protein M1S35_18200 PF03958 Bacterial type II/III secretion system short domain M1S35_18215 PF00816 H-NS histone family M1S35_18240 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S35_18240 PF03900 Porphobilinogen deaminase, C-terminal domain M1S35_18245 PF04397 LytTr DNA-binding domain M1S35_18245 PF00072 Response regulator receiver domain M1S35_18250 PF07694 5TMR of 5TMR-LYT M1S35_18250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_18250 PF06580 Histidine kinase M1S35_18255 PF00206 Lyase M1S35_18255 PF14698 Argininosuccinate lyase C-terminal M1S35_18260 PF04362 Bacterial Fe(2+) trafficking M1S35_18265 PF01895 PhoU domain M1S35_18270 PF02321 Outer membrane efflux protein M1S35_18275 PF00892 EamA-like transporter family M1S35_18290 PF13667 ThiC-associated domain M1S35_18290 PF01964 Radical SAM ThiC family M1S35_18295 PF00293 NUDIX domain M1S35_18300 PF00149 Calcineurin-like phosphoesterase M1S35_18305 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S35_18310 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S35_18315 PF01098 Cell cycle protein M1S35_18320 PF02875 Mur ligase family, glutamate ligase domain M1S35_18320 PF08245 Mur ligase middle domain M1S35_18330 PF07664 Ferrous iron transport protein B C terminus M1S35_18330 PF02421 Ferrous iron transport protein B M1S35_18330 PF07670 Nucleoside recognition M1S35_18340 PF00589 Phage integrase family M1S35_18340 PF02899 Phage integrase, N-terminal SAM-like domain M1S35_18345 PF10411 Disulfide bond isomerase protein N-terminus M1S35_18345 PF13098 Thioredoxin-like domain M1S35_18350 PF01842 ACT domain M1S35_18350 PF03447 Homoserine dehydrogenase, NAD binding domain M1S35_18350 PF00742 Homoserine dehydrogenase M1S35_18355 PF00291 Pyridoxal-phosphate dependent enzyme M1S35_18360 PF00768 D-alanyl-D-alanine carboxypeptidase M1S35_18365 PF00196 Bacterial regulatory proteins, luxR family M1S35_18365 PF00072 Response regulator receiver domain M1S35_18370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S35_18370 PF00512 His Kinase A (phospho-acceptor) domain M1S35_18375 PF00072 Response regulator receiver domain M1S35_18375 PF02954 Bacterial regulatory protein, Fis family M1S35_18375 PF00158 Sigma-54 interaction domain M1S35_18380 PF03572 Peptidase family S41 M1S35_18380 PF00595 PDZ domain M1S35_18385 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S35_18385 PF01676 Metalloenzyme superfamily M1S35_18390 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S35_18400 PF00883 Cytosol aminopeptidase family, catalytic domain M1S35_18400 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S35_18420 PF00677 Lumazine binding domain M1S35_18430 PF01872 RibD C-terminal domain M1S35_18430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S35_18435 PF03477 ATP cone domain M1S35_18440 PF00909 Ammonium Transporter Family M1S35_18445 PF00543 Nitrogen regulatory protein P-II M1S35_18465 PF01636 Phosphotransferase enzyme family M1S35_18470 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S35_18490 PF00440 Bacterial regulatory proteins, tetR family M1S35_18490 PF02909 Tetracyclin repressor-like, C-terminal domain M1S35_18495 PF07690 Major Facilitator Superfamily M1S35_18505 PF00916 Sulfate permease family M1S35_18505 PF01740 STAS domain M1S35_18510 PF00582 Universal stress protein family M1S35_18540 PF00665 Integrase core domain M1S35_18555 PF00155 Aminotransferase class I and II M1S35_18555 PF00392 Bacterial regulatory proteins, gntR family M1S35_18565 PF00701 Dihydrodipicolinate synthetase family M1S35_18585 PF00719 Inorganic pyrophosphatase M1S35_18600 PF00501 AMP-binding enzyme M1S35_18600 PF13193 AMP-binding enzyme C-terminal domain M1S35_18605 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S35_18605 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S35_18610 PF07690 Major Facilitator Superfamily M1S35_18615 PF03458 UPF0126 domain M1S35_18620 PF02810 SEC-C motif M1S35_18625 PF03741 Integral membrane protein TerC family M1S35_18625 PF03471 Transporter associated domain M1S35_18630 PF03641 Possible lysine decarboxylase M1S35_18635 PF07690 Major Facilitator Superfamily M1S35_18645 PF00817 impB/mucB/samB family M1S35_18645 PF11799 impB/mucB/samB family C-terminal domain M1S35_18645 PF11798 IMS family HHH motif M1S35_18665 PF11842 Domain of unknown function (DUF3362) M1S35_18665 PF04055 Radical SAM superfamily M1S35_18665 PF08497 Radical SAM N-terminal M1S35_18685 PF03358 NADPH-dependent FMN reductase M1S35_18695 PF00291 Pyridoxal-phosphate dependent enzyme M1S35_18755 PF01327 Polypeptide deformylase M1S35_18765 PF02481 DNA recombination-mediator protein A M1S35_18765 PF17782 DprA winged helix domain M1S35_18770 PF01300 Telomere recombination M1S35_18775 PF00892 EamA-like transporter family M1S35_18780 PF00440 Bacterial regulatory proteins, tetR family M1S35_18785 PF07690 Major Facilitator Superfamily M1S35_18795 PF00255 Glutathione peroxidase M1S35_18805 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S35_18810 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S35_18810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S35_18815 PF00231 ATP synthase M1S35_18820 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S35_18820 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S35_18820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S35_18825 PF00213 ATP synthase delta (OSCP) subunit M1S35_18830 PF00430 ATP synthase B/B' CF(0) M1S35_18835 PF00137 ATP synthase subunit C M1S35_18840 PF00119 ATP synthase A chain M1S35_18860 PF00005 ABC transporter M1S35_18865 PF00950 ABC 3 transport family M1S35_18870 PF01810 LysE type translocator M1S35_18875 PF04261 Dyp-type peroxidase family M1S35_18885 PF00390 Malic enzyme, N-terminal domain M1S35_18885 PF03949 Malic enzyme, NAD binding domain M1S35_18890 PF03485 Arginyl tRNA synthetase N terminal domain M1S35_18890 PF05746 DALR anticodon binding domain M1S35_18890 PF00750 tRNA synthetases class I (R) M1S35_18910 PF02678 Pirin M1S35_18910 PF05726 Pirin C-terminal cupin domain M1S35_18920 PF03551 Transcriptional regulator PadR-like family M1S35_18925 PF13427 Domain of unknown function (DUF4111) M1S35_18925 PF01909 Nucleotidyltransferase domain M1S35_18930 PF00117 Glutamine amidotransferase class-I M1S35_18930 PF00958 GMP synthase C terminal domain M1S35_18930 PF02540 NAD synthase M1S35_18935 PF04286 Protein of unknown function (DUF445) M1S35_18940 PF07681 DoxX M1S35_18945 PF09335 SNARE associated Golgi protein M1S35_18960 PF13614 AAA domain M1S35_18970 PF01722 BolA-like protein M1S35_18985 PF01648 4'-phosphopantetheinyl transferase superfamily M1S35_18990 PF12697 Alpha/beta hydrolase family M1S35_19010 PF16197 Ketoacyl-synthetase C-terminal extension M1S35_19010 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S35_19010 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S35_19010 PF00975 Thioesterase domain M1S35_19010 PF14765 Polyketide synthase dehydratase M1S35_19010 PF08242 Methyltransferase domain M1S35_19010 PF00550 Phosphopantetheine attachment site M1S35_19015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_19015 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_19015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_19020 PF00501 AMP-binding enzyme M1S35_19025 PF03472 Autoinducer binding domain M1S35_19025 PF00196 Bacterial regulatory proteins, luxR family M1S35_19035 PF00765 Autoinducer synthase M1S35_19040 PF07690 Major Facilitator Superfamily M1S35_19040 PF00083 Sugar (and other) transporter M1S35_19045 PF00378 Enoyl-CoA hydratase/isomerase M1S35_19050 PF00378 Enoyl-CoA hydratase/isomerase M1S35_19055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S35_19055 PF02770 Acyl-CoA dehydrogenase, middle domain M1S35_19055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S35_19060 PF13193 AMP-binding enzyme C-terminal domain M1S35_19060 PF00501 AMP-binding enzyme M1S35_19065 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S35_19065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S35_19070 PF00171 Aldehyde dehydrogenase family M1S35_19080 PF00324 Amino acid permease M1S35_19085 PF00324 Amino acid permease M1S35_19090 PF01042 Endoribonuclease L-PSP M1S35_19095 PF00842 Alanine racemase, C-terminal domain M1S35_19095 PF01168 Alanine racemase, N-terminal domain M1S35_19100 PF01266 FAD dependent oxidoreductase M1S35_19105 PF01037 Lrp/AsnC ligand binding domain M1S35_19115 PF00593 TonB dependent receptor M1S35_19115 PF07715 TonB-dependent Receptor Plug Domain M1S35_19130 PF00849 RNA pseudouridylate synthase M1S35_19145 PF00440 Bacterial regulatory proteins, tetR family M1S35_19145 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S35_19155 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S35_19155 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S35_19190 PF00694 Aconitase C-terminal domain M1S35_19190 PF00330 Aconitase family (aconitate hydratase) M1S35_19195 PF00285 Citrate synthase, C-terminal domain M1S35_19205 PF07729 FCD domain M1S35_19205 PF00392 Bacterial regulatory proteins, gntR family M1S35_19215 PF00155 Aminotransferase class I and II M1S35_19220 PF01565 FAD binding domain M1S35_19220 PF09330 D-lactate dehydrogenase, membrane binding M1S35_19225 PF01070 FMN-dependent dehydrogenase M1S35_19230 PF07729 FCD domain M1S35_19230 PF00392 Bacterial regulatory proteins, gntR family M1S35_19235 PF02652 L-lactate permease M1S35_19240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S35_19240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S35_19240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S35_19240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S35_19245 PF16363 GDP-mannose 4,6 dehydratase M1S35_19250 PF00342 Phosphoglucose isomerase M1S35_19255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S35_19255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S35_19255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S35_19260 PF00483 Nucleotidyl transferase M1S35_19265 PF02397 Bacterial sugar transferase M1S35_19270 PF00535 Glycosyl transferase family 2 M1S35_19300 PF08666 SAF domain M1S35_19300 PF03102 NeuB family M1S35_19315 PF02348 Cytidylyltransferase M1S35_19320 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S35_19325 PF02719 Polysaccharide biosynthesis protein M1S35_19330 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S35_19330 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S35_19330 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S35_19335 PF10531 SLBB domain M1S35_19335 PF02563 Polysaccharide biosynthesis/export protein M1S35_19335 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S35_19340 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S35_19345 PF13807 G-rich domain on putative tyrosine kinase M1S35_19345 PF02706 Chain length determinant protein M1S35_19345 PF13614 AAA domain M1S35_19350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S35_19350 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S35_19355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S35_19355 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S35_19360 PF03023 Lipid II flippase MurJ M1S35_19365 PF01510 N-acetylmuramoyl-L-alanine amidase M1S35_19370 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S35_19370 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S35_19380 PF05506 Domain of unknown function (DUF756) M1S35_19380 PF04185 Phosphoesterase family M1S35_19390 PF01138 3' exoribonuclease family, domain 1 M1S35_19390 PF03725 3' exoribonuclease family, domain 2 M1S35_19395 PF00487 Fatty acid desaturase M1S35_19400 PF00175 Oxidoreductase NAD-binding domain M1S35_19405 PF00440 Bacterial regulatory proteins, tetR family M1S35_19410 PF08360 QacR-like protein, C-terminal region M1S35_19410 PF00440 Bacterial regulatory proteins, tetR family M1S35_19415 PF01323 DSBA-like thioredoxin domain M1S35_19425 PF13419 Haloacid dehalogenase-like hydrolase M1S35_19430 PF00106 short chain dehydrogenase M1S35_19445 PF00696 Amino acid kinase family M1S35_19445 PF00583 Acetyltransferase (GNAT) family M1S35_19450 PF09084 NMT1/THI5 like M1S35_19455 PF09084 NMT1/THI5 like M1S35_19460 PF00296 Luciferase-like monooxygenase M1S35_19465 PF00528 Binding-protein-dependent transport system inner membrane component M1S35_19470 PF00005 ABC transporter M1S35_19475 PF08362 YcdC-like protein, C-terminal region M1S35_19475 PF00440 Bacterial regulatory proteins, tetR family M1S35_19480 PF01048 Phosphorylase superfamily M1S35_19490 PF01687 Riboflavin kinase M1S35_19490 PF06574 FAD synthetase M1S35_19495 PF00133 tRNA synthetases class I (I, L, M and V) M1S35_19495 PF06827 Zinc finger found in FPG and IleRS M1S35_19495 PF08264 Anticodon-binding domain of tRNA M1S35_19500 PF01252 Signal peptidase (SPase) II M1S35_19505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S35_19545 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S35_19550 PF07859 alpha/beta hydrolase fold M1S35_19570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S35_19570 PF03466 LysR substrate binding domain M1S35_19575 PF01025 GrpE M1S35_19580 PF00012 Hsp70 protein M1S35_19600 PF13406 Transglycosylase SLT domain M1S35_19605 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S35_19605 PF02222 ATP-grasp domain M1S35_19610 PF00731 AIR carboxylase M1S35_19620 PF01225 Mur ligase family, catalytic domain M1S35_19620 PF08245 Mur ligase middle domain M1S35_19620 PF02875 Mur ligase family, glutamate ligase domain M1S35_19630 PF01569 PAP2 superfamily M1S35_19635 PF03741 Integral membrane protein TerC family M1S35_19645 PF03738 Glutathionylspermidine synthase preATP-grasp M1S35_19650 PF00355 Rieske [2Fe-2S] domain M1S35_19655 PF01979 Amidohydrolase family M1S35_19660 PF00156 Phosphoribosyl transferase domain M1S35_19670 PF10411 Disulfide bond isomerase protein N-terminus M1S35_19670 PF13098 Thioredoxin-like domain M1S35_19675 PF01545 Cation efflux family M1S35_19675 PF16916 Dimerisation domain of Zinc Transporter M1S35_19680 PF02583 Metal-sensitive transcriptional repressor M1S35_19685 PF01926 50S ribosome-binding GTPase M1S35_19685 PF12631 MnmE helical domain M1S35_19685 PF10396 GTP-binding protein TrmE N-terminus M1S35_19690 PF02096 60Kd inner membrane protein M1S35_19690 PF14849 YidC periplasmic domain M1S35_19695 PF01809 Putative membrane protein insertion efficiency factor M1S35_19700 PF00825 Ribonuclease P M1S35_19705 PF00468 Ribosomal protein L34 M1S35_19730 PF01807 CHC2 zinc finger M1S35_19730 PF08275 DNA primase catalytic core, N-terminal domain M1S35_19730 PF10410 DnaB-helicase binding domain of primase M1S35_19760 PF00625 Guanylate kinase M1S35_19775 PF07015 VirC1 protein M1S35_19785 PF00589 Phage integrase family M1S35_19785 PF02899 Phage integrase, N-terminal SAM-like domain M1S35_19820 PF02811 PHP domain M1S35_19820 PF14579 Helix-hairpin-helix motif M1S35_19820 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S35_19820 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S35_19830 PF02811 PHP domain M1S35_19830 PF14579 Helix-hairpin-helix motif M1S35_19830 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S35_19830 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S35_19845 PF01612 3'-5' exonuclease M1S35_19845 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S35_19845 PF00476 DNA polymerase family A M1S35_19845 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S35_19850 PF00154 recA bacterial DNA recombination protein M1S35_19850 PF03161 LAGLIDADG DNA endonuclease family M1S35_19875 PF02463 RecF/RecN/SMC N terminal domain M1S35_19875 PF06470 SMC proteins Flexible Hinge Domain M1S35_19895 PF02867 Ribonucleotide reductase, barrel domain M1S35_19895 PF03477 ATP cone domain M1S35_19895 PF00317 Ribonucleotide reductase, all-alpha domain M1S35_19900 PF00268 Ribonucleotide reductase, small chain M1S35_19940 PF00929 Exonuclease M1S35_19975 PF13737 Transposase DDE domain M1S35_19985 PF00440 Bacterial regulatory proteins, tetR family M1S35_19985 PF16925 Tetracyclin repressor-like, C-terminal domain M1S35_19995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S35_20005 PF00465 Iron-containing alcohol dehydrogenase M1S35_20020 PF00756 Putative esterase M1S35_20025 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_20025 PF00107 Zinc-binding dehydrogenase M1S35_20030 PF02583 Metal-sensitive transcriptional repressor M1S35_20045 PF00107 Zinc-binding dehydrogenase M1S35_20045 PF08240 Alcohol dehydrogenase GroES-like domain M1S35_20045 PF13823 Alcohol dehydrogenase GroES-associated M1S35_20110 PF02216 B domain M1S35_20110 PF00746 LPXTG cell wall anchor motif M1S35_20110 PF01476 LysM domain M1S35_20110 PF03373 Octapeptide repeat M1S35_20110 PF04650 YSIRK type signal peptide M1S35_20125 PF02559 CarD-like/TRCF domain M1S35_20125 PF00270 DEAD/DEAH box helicase M1S35_20125 PF00271 Helicase conserved C-terminal domain M1S35_20125 PF03461 TRCF domain M1S35_20125 PF17757 UvrB interaction domain M1S35_20145 PF00005 ABC transporter M1S35_20145 PF09383 NIL domain