locus-tag class description M1S46_00005 PF00308 Bacterial dnaA protein M1S46_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S46_00005 PF11638 DnaA N-terminal domain M1S46_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S46_00010 PF02767 DNA polymerase III beta subunit, central domain M1S46_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S46_00015 PF02463 RecF/RecN/SMC N terminal domain M1S46_00020 PF00204 DNA gyrase B M1S46_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S46_00020 PF18053 DNA gyrase B subunit insert domain M1S46_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_00020 PF01751 Toprim domain M1S46_00030 PF09335 SNARE associated Golgi protein M1S46_00035 PF00005 ABC transporter M1S46_00035 PF12848 ABC transporter M1S46_00055 PF01521 Iron-sulphur cluster biosynthesis M1S46_00060 PF00561 alpha/beta hydrolase fold M1S46_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S46_00070 PF00579 tRNA synthetases class I (W and Y) M1S46_00110 PF00209 Sodium:neurotransmitter symporter family M1S46_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S46_00120 PF01029 NusB family M1S46_00125 PF02911 Formyl transferase, C-terminal domain M1S46_00125 PF00551 Formyl transferase M1S46_00130 PF00920 Dehydratase family M1S46_00145 PF03466 LysR substrate binding domain M1S46_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_00150 PF00860 Permease family M1S46_00155 PF00311 Phosphoenolpyruvate carboxylase M1S46_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S46_00160 PF00440 Bacterial regulatory proteins, tetR family M1S46_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S46_00170 PF00873 AcrB/AcrD/AcrF family M1S46_00180 PF00684 DnaJ central domain M1S46_00180 PF01556 DnaJ C terminal domain M1S46_00180 PF00226 DnaJ domain M1S46_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S46_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S46_00200 PF07690 Major Facilitator Superfamily M1S46_00205 PF00248 Aldo/keto reductase family M1S46_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_00210 PF03466 LysR substrate binding domain M1S46_00225 PF00392 Bacterial regulatory proteins, gntR family M1S46_00225 PF00155 Aminotransferase class I and II M1S46_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S46_00230 PF00107 Zinc-binding dehydrogenase M1S46_00235 PF03352 Methyladenine glycosylase M1S46_00250 PF00633 Helix-hairpin-helix motif M1S46_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S46_00250 PF14815 NUDIX domain M1S46_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S46_00265 PF07043 Protein of unknown function (DUF1328) M1S46_00270 PF03692 Putative zinc- or iron-chelating domain M1S46_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S46_00280 PF16193 AAA C-terminal domain M1S46_00280 PF12002 MgsA AAA+ ATPase C terminal M1S46_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S46_00285 PF01226 Formate/nitrite transporter M1S46_00295 PF01259 SAICAR synthetase M1S46_00305 PF00701 Dihydrodipicolinate synthetase family M1S46_00310 PF00857 Isochorismatase family M1S46_00315 PF01758 Sodium Bile acid symporter family M1S46_00320 PF01554 MatE M1S46_00325 PF04463 Protein of unknown function (DUF523) M1S46_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S46_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S46_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S46_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S46_00355 PF00324 Amino acid permease M1S46_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S46_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S46_00375 PF00392 Bacterial regulatory proteins, gntR family M1S46_00375 PF07702 UTRA domain M1S46_00380 PF05962 HutD M1S46_00385 PF17391 Urocanase N-terminal domain M1S46_00385 PF17392 Urocanase C-terminal domain M1S46_00385 PF01175 Urocanase Rossmann-like domain M1S46_00390 PF00221 Aromatic amino acid lyase M1S46_00395 PF00324 Amino acid permease M1S46_00400 PF01979 Amidohydrolase family M1S46_00405 PF00491 Arginase family M1S46_00420 PF01177 Asp/Glu/Hydantoin racemase M1S46_00425 PF01380 SIS domain M1S46_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S46_00430 PF12804 MobA-like NTP transferase domain M1S46_00435 PF04608 Phosphatidylglycerophosphatase A M1S46_00440 PF02769 AIR synthase related protein, C-terminal domain M1S46_00440 PF00586 AIR synthase related protein, N-terminal domain M1S46_00445 PF01029 NusB family M1S46_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S46_00455 PF00925 GTP cyclohydrolase II M1S46_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S46_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S46_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S46_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S46_00490 PF00581 Rhodanese-like domain M1S46_00495 PF02666 Phosphatidylserine decarboxylase M1S46_00500 PF03069 Acetamidase/Formamidase family M1S46_00520 PF00989 PAS fold M1S46_00520 PF11808 Phosphate regulon sensor protein PhoR M1S46_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S46_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_00525 PF00072 Response regulator receiver domain M1S46_00525 PF00486 Transcriptional regulatory protein, C terminal M1S46_00535 PF00106 short chain dehydrogenase M1S46_00540 PF01554 MatE M1S46_00545 PF00155 Aminotransferase class I and II M1S46_00550 PF04286 Protein of unknown function (DUF445) M1S46_00565 PF04262 Glutamate-cysteine ligase M1S46_00570 PF02600 Disulfide bond formation protein DsbB M1S46_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S46_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S46_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S46_00580 PF00877 NlpC/P60 family M1S46_00580 PF01476 LysM domain M1S46_00595 PF05728 Uncharacterised protein family (UPF0227) M1S46_00600 PF01751 Toprim domain M1S46_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S46_00600 PF00204 DNA gyrase B M1S46_00605 PF00106 short chain dehydrogenase M1S46_00610 PF04115 Ureidoglycolate lyase M1S46_00615 PF03561 Allantoicase repeat M1S46_00620 PF01494 FAD binding domain M1S46_00630 PF00860 Permease family M1S46_00635 PF00576 HIUase/Transthyretin family M1S46_00665 PF11412 Disulphide bond corrector protein DsbC M1S46_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S46_00670 PF07694 5TMR of 5TMR-LYT M1S46_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S46_00675 PF07859 alpha/beta hydrolase fold M1S46_00685 PF03960 ArsC family M1S46_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S46_00695 PF00156 Phosphoribosyl transferase domain M1S46_00700 PF00593 TonB dependent receptor M1S46_00700 PF07715 TonB-dependent Receptor Plug Domain M1S46_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S46_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S46_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S46_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S46_00720 PF01225 Mur ligase family, catalytic domain M1S46_00720 PF02875 Mur ligase family, glutamate ligase domain M1S46_00720 PF08245 Mur ligase middle domain M1S46_00725 PF07478 D-ala D-ala ligase C-terminus M1S46_00725 PF01820 D-ala D-ala ligase N-terminus M1S46_00730 PF08478 POTRA domain, FtsQ-type M1S46_00730 PF03799 Cell division protein FtsQ M1S46_00735 PF02491 SHS2 domain inserted in FTSA M1S46_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S46_00740 PF12327 FtsZ family, C-terminal domain M1S46_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S46_00755 PF01551 Peptidase family M23 M1S46_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S46_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S46_00765 PF00364 Biotin-requiring enzyme M1S46_00765 PF02817 e3 binding domain M1S46_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S46_00775 PF01169 Uncharacterized protein family UPF0016 M1S46_00780 PF00593 TonB dependent receptor M1S46_00780 PF07715 TonB-dependent Receptor Plug Domain M1S46_00785 PF00258 Flavodoxin M1S46_00785 PF01613 Flavin reductase like domain M1S46_00790 PF03692 Putative zinc- or iron-chelating domain M1S46_00795 PF00478 IMP dehydrogenase / GMP reductase domain M1S46_00795 PF00571 CBS domain M1S46_00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S46_00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S46_00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S46_00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S46_00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S46_00805 PF01243 Pyridoxamine 5'-phosphate oxidase M1S46_00810 PF01368 DHH family M1S46_00810 PF17768 RecJ OB domain M1S46_00810 PF02272 DHHA1 domain M1S46_00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S46_00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S46_00840 PF04452 RNA methyltransferase M1S46_00845 PF00924 Mechanosensitive ion channel M1S46_00855 PF13193 AMP-binding enzyme C-terminal domain M1S46_00855 PF00501 AMP-binding enzyme M1S46_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S46_00860 PF00857 Isochorismatase family M1S46_00865 PF01037 Lrp/AsnC ligand binding domain M1S46_00870 PF00872 Transposase, Mutator family M1S46_00875 PF00296 Luciferase-like monooxygenase M1S46_00880 PF03358 NADPH-dependent FMN reductase M1S46_00885 PF00196 Bacterial regulatory proteins, luxR family M1S46_00885 PF00072 Response regulator receiver domain M1S46_00895 PF01627 Hpt domain M1S46_00895 PF00512 His Kinase A (phospho-acceptor) domain M1S46_00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_00895 PF00672 HAMP domain M1S46_00895 PF00072 Response regulator receiver domain M1S46_00900 PF04341 Protein of unknown function, DUF485 M1S46_00905 PF00474 Sodium:solute symporter family M1S46_00915 PF02028 BCCT, betaine/carnitine/choline family transporter M1S46_00925 PF00990 Diguanylate cyclase, GGDEF domain M1S46_00935 PF00005 ABC transporter M1S46_00935 PF17755 UvrA DNA-binding domain M1S46_00935 PF17760 UvrA interaction domain M1S46_00940 PF16925 Tetracyclin repressor-like, C-terminal domain M1S46_00940 PF00440 Bacterial regulatory proteins, tetR family M1S46_00945 PF08240 Alcohol dehydrogenase GroES-like domain M1S46_00945 PF00107 Zinc-binding dehydrogenase M1S46_00960 PF06942 GlpM protein M1S46_00965 PF03070 TENA/THI-4/PQQC family M1S46_00965 PF02581 Thiamine monophosphate synthase M1S46_00965 PF08543 Phosphomethylpyrimidine kinase M1S46_00975 PF07690 Major Facilitator Superfamily M1S46_00980 PF00436 Single-strand binding protein family M1S46_00990 PF03591 AzlC protein M1S46_01000 PF00324 Amino acid permease M1S46_01005 PF00392 Bacterial regulatory proteins, gntR family M1S46_01005 PF00155 Aminotransferase class I and II M1S46_01010 PF00202 Aminotransferase class-III M1S46_01015 PF00171 Aldehyde dehydrogenase family M1S46_01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_01025 PF00857 Isochorismatase family M1S46_01030 PF05726 Pirin C-terminal cupin domain M1S46_01030 PF02678 Pirin M1S46_01035 PF01593 Flavin containing amine oxidoreductase M1S46_01055 PF07690 Major Facilitator Superfamily M1S46_01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_01060 PF03466 LysR substrate binding domain M1S46_01080 PF00248 Aldo/keto reductase family M1S46_01085 PF02311 AraC-like ligand binding domain M1S46_01085 PF12833 Helix-turn-helix domain M1S46_01115 PF01638 HxlR-like helix-turn-helix M1S46_01120 PF02525 Flavodoxin-like fold M1S46_01140 PF02705 K+ potassium transporter M1S46_01165 PF00230 Major intrinsic protein M1S46_01185 PF00977 Histidine biosynthesis protein M1S46_01190 PF01636 Phosphotransferase enzyme family M1S46_01205 PF03992 Antibiotic biosynthesis monooxygenase M1S46_01220 PF00977 Histidine biosynthesis protein M1S46_01235 PF00117 Glutamine amidotransferase class-I M1S46_01240 PF00475 Imidazoleglycerol-phosphate dehydratase M1S46_01260 PF00583 Acetyltransferase (GNAT) family M1S46_01265 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S46_01265 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S46_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_01275 PF00512 His Kinase A (phospho-acceptor) domain M1S46_01275 PF00672 HAMP domain M1S46_01280 PF00072 Response regulator receiver domain M1S46_01280 PF00486 Transcriptional regulatory protein, C terminal M1S46_01285 PF17674 HHH domain M1S46_01285 PF00575 S1 RNA binding domain M1S46_01285 PF09371 Tex-like protein N-terminal domain M1S46_01285 PF16921 Tex protein YqgF-like domain M1S46_01290 PF01740 STAS domain M1S46_01290 PF00916 Sulfate permease family M1S46_01295 PF00106 short chain dehydrogenase M1S46_01300 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S46_01305 PF12848 ABC transporter M1S46_01305 PF00005 ABC transporter M1S46_01330 PF04191 Phospholipid methyltransferase M1S46_01350 PF00529 HlyD membrane-fusion protein of T1SS M1S46_01350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S46_01355 PF00873 AcrB/AcrD/AcrF family M1S46_01360 PF01545 Cation efflux family M1S46_01385 PF00324 Amino acid permease M1S46_01400 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S46_01415 PF01795 MraW methylase family M1S46_01425 PF03717 Penicillin-binding Protein dimerisation domain M1S46_01425 PF00905 Penicillin binding protein transpeptidase domain M1S46_01430 PF08245 Mur ligase middle domain M1S46_01430 PF02875 Mur ligase family, glutamate ligase domain M1S46_01430 PF01225 Mur ligase family, catalytic domain M1S46_01435 PF08245 Mur ligase middle domain M1S46_01435 PF02875 Mur ligase family, glutamate ligase domain M1S46_01435 PF01225 Mur ligase family, catalytic domain M1S46_01440 PF00953 Glycosyl transferase family 4 M1S46_01450 PF13847 Methyltransferase domain M1S46_01455 PF00912 Transglycosylase M1S46_01455 PF17092 Penicillin-binding protein OB-like domain M1S46_01455 PF00905 Penicillin binding protein transpeptidase domain M1S46_01460 PF11104 Type IV pilus assembly protein PilM; M1S46_01465 PF05137 Fimbrial assembly protein (PilN) M1S46_01470 PF04350 Pilus assembly protein, PilO M1S46_01480 PF11741 AMIN domain M1S46_01480 PF07660 Secretin and TonB N terminus short domain M1S46_01480 PF03958 Bacterial type II/III secretion system short domain M1S46_01480 PF00263 Bacterial type II and III secretion system protein M1S46_01485 PF01202 Shikimate kinase M1S46_01490 PF01761 3-dehydroquinate synthase M1S46_01500 PF00310 Glutamine amidotransferases class-II M1S46_01500 PF04898 Glutamate synthase central domain M1S46_01500 PF01645 Conserved region in glutamate synthase M1S46_01500 PF01493 GXGXG motif M1S46_01505 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S46_01505 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_01515 PF04011 LemA family M1S46_01520 PF04536 TPM domain M1S46_01530 PF07963 Prokaryotic N-terminal methylation motif M1S46_01530 PF00114 Pilin (bacterial filament) M1S46_01540 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S46_01540 PF04932 O-Antigen ligase M1S46_01540 PF15864 Protein glycosylation ligase M1S46_01550 PF00210 Ferritin-like domain M1S46_01555 PF04324 BFD-like [2Fe-2S] binding domain M1S46_01560 PF01042 Endoribonuclease L-PSP M1S46_01565 PF02824 TGS domain M1S46_01565 PF04607 Region found in RelA / SpoT proteins M1S46_01565 PF13291 ACT domain M1S46_01575 PF01192 RNA polymerase Rpb6 M1S46_01580 PF00625 Guanylate kinase M1S46_01585 PF02401 LytB protein M1S46_01625 PF00886 Ribosomal protein S16 M1S46_01630 PF01782 RimM N-terminal domain M1S46_01630 PF05239 PRC-barrel domain M1S46_01635 PF01746 tRNA (Guanine-1)-methyltransferase M1S46_01640 PF01245 Ribosomal protein L19 M1S46_01645 PF00561 alpha/beta hydrolase fold M1S46_01650 PF03280 Proteobacterial lipase chaperone protein M1S46_01655 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S46_01655 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S46_01655 PF09157 Pseudouridine synthase II TruB, C-terminal M1S46_01660 PF01925 Sulfite exporter TauE/SafE M1S46_01670 PF00892 EamA-like transporter family M1S46_01675 PF00892 EamA-like transporter family M1S46_01680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S46_01680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S46_01685 PF02913 FAD linked oxidases, C-terminal domain M1S46_01685 PF01565 FAD binding domain M1S46_01695 PF03992 Antibiotic biosynthesis monooxygenase M1S46_01700 PF02525 Flavodoxin-like fold M1S46_01710 PF07690 Major Facilitator Superfamily M1S46_01715 PF12805 FUSC-like inner membrane protein yccS M1S46_01720 PF00080 Copper/zinc superoxide dismutase (SODC) M1S46_01725 PF01594 AI-2E family transporter M1S46_01730 PF13614 AAA domain M1S46_01760 PF00324 Amino acid permease M1S46_01765 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S46_01765 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S46_01770 PF00202 Aminotransferase class-III M1S46_01775 PF04958 Arginine N-succinyltransferase beta subunit M1S46_01780 PF00171 Aldehyde dehydrogenase family M1S46_01785 PF04996 Succinylarginine dihydrolase M1S46_01790 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S46_01805 PF05922 Peptidase inhibitor I9 M1S46_01805 PF00082 Subtilase family M1S46_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_01820 PF03466 LysR substrate binding domain M1S46_01825 PF00892 EamA-like transporter family M1S46_01835 PF05746 DALR anticodon binding domain M1S46_01835 PF02092 Glycyl-tRNA synthetase beta subunit M1S46_01840 PF02091 Glycyl-tRNA synthetase alpha subunit M1S46_01865 PF00571 CBS domain M1S46_01870 PF04024 PspC domain M1S46_01880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_01880 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_01880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_01880 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S46_01890 PF08501 Shikimate dehydrogenase substrate binding domain M1S46_01890 PF01488 Shikimate / quinate 5-dehydrogenase M1S46_01890 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S46_01895 PF01218 Coproporphyrinogen III oxidase M1S46_01900 PF00925 GTP cyclohydrolase II M1S46_01905 PF02779 Transketolase, pyrimidine binding domain M1S46_01905 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S46_01905 PF02780 Transketolase, C-terminal domain M1S46_01910 PF00459 Inositol monophosphatase family M1S46_01915 PF00271 Helicase conserved C-terminal domain M1S46_01915 PF00270 DEAD/DEAH box helicase M1S46_01915 PF12343 Cold shock protein DEAD box A M1S46_01915 PF03880 DbpA RNA binding domain M1S46_01925 PF00005 ABC transporter M1S46_01930 PF02405 Permease MlaE M1S46_01940 PF05494 MlaC protein M1S46_01950 PF01544 CorA-like Mg2+ transporter protein M1S46_01955 PF03641 Possible lysine decarboxylase M1S46_01960 PF00293 NUDIX domain M1S46_01965 PF00156 Phosphoribosyl transferase domain M1S46_01970 PF00270 DEAD/DEAH box helicase M1S46_01970 PF17191 RecG wedge domain M1S46_01970 PF00271 Helicase conserved C-terminal domain M1S46_01985 PF01553 Acyltransferase M1S46_01995 PF00375 Sodium:dicarboxylate symporter family M1S46_02010 PF02082 Transcriptional regulator M1S46_02015 PF00970 Oxidoreductase FAD-binding domain M1S46_02015 PF00042 Globin M1S46_02015 PF00175 Oxidoreductase NAD-binding domain M1S46_02020 PF05872 Bacterial protein of unknown function (DUF853) M1S46_02025 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S46_02030 PF00117 Glutamine amidotransferase class-I M1S46_02035 PF00338 Ribosomal protein S10p/S20e M1S46_02040 PF00297 Ribosomal protein L3 M1S46_02045 PF00573 Ribosomal protein L4/L1 family M1S46_02050 PF00276 Ribosomal protein L23 M1S46_02055 PF00181 Ribosomal Proteins L2, RNA binding domain M1S46_02055 PF03947 Ribosomal Proteins L2, C-terminal domain M1S46_02060 PF00203 Ribosomal protein S19 M1S46_02065 PF00237 Ribosomal protein L22p/L17e M1S46_02075 PF00252 Ribosomal protein L16p/L10e M1S46_02080 PF00831 Ribosomal L29 protein M1S46_02085 PF00366 Ribosomal protein S17 M1S46_02090 PF00238 Ribosomal protein L14p/L23e M1S46_02095 PF00467 KOW motif M1S46_02095 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S46_02100 PF00673 ribosomal L5P family C-terminus M1S46_02100 PF00281 Ribosomal protein L5 M1S46_02105 PF00253 Ribosomal protein S14p/S29e M1S46_02110 PF00410 Ribosomal protein S8 M1S46_02115 PF00347 Ribosomal protein L6 M1S46_02120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S46_02125 PF00333 Ribosomal protein S5, N-terminal domain M1S46_02125 PF03719 Ribosomal protein S5, C-terminal domain M1S46_02130 PF00327 Ribosomal protein L30p/L7e M1S46_02135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S46_02140 PF00344 SecY translocase M1S46_02145 PF00444 Ribosomal protein L36 M1S46_02150 PF00416 Ribosomal protein S13/S18 M1S46_02155 PF00411 Ribosomal protein S11 M1S46_02160 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S46_02160 PF01479 S4 domain M1S46_02165 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S46_02165 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S46_02165 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S46_02170 PF01196 Ribosomal protein L17 M1S46_02175 PF00743 Flavin-binding monooxygenase-like M1S46_02180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_02180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_02180 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_02185 PF03937 Flavinator of succinate dehydrogenase M1S46_02215 PF09526 Probable metal-binding protein (DUF2387) M1S46_02220 PF01432 Peptidase family M3 M1S46_02225 PF00773 RNB domain M1S46_02225 PF08206 Ribonuclease B OB domain M1S46_02225 PF00575 S1 RNA binding domain M1S46_02225 PF17876 Cold shock domain M1S46_02225 PF08461 Ribonuclease R winged-helix domain M1S46_02270 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S46_02275 PF12833 Helix-turn-helix domain M1S46_02280 PF00892 EamA-like transporter family M1S46_02290 PF03358 NADPH-dependent FMN reductase M1S46_02315 PF02130 Uncharacterized protein family UPF0054 M1S46_02320 PF02562 PhoH-like protein M1S46_02325 PF04055 Radical SAM superfamily M1S46_02325 PF01938 TRAM domain M1S46_02325 PF00919 Uncharacterized protein family UPF0004 M1S46_02330 PF01464 Transglycosylase SLT domain M1S46_02330 PF10145 Phage-related minor tail protein M1S46_02330 PF01551 Peptidase family M23 M1S46_02340 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S46_02340 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S46_02360 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S46_02365 PF01066 CDP-alcohol phosphatidyltransferase M1S46_02410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_02410 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_02410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_02415 PF17932 Tetracyclin repressor-like, C-terminal domain M1S46_02415 PF00440 Bacterial regulatory proteins, tetR family M1S46_02430 PF01039 Carboxyl transferase domain M1S46_02435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_02435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_02435 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_02445 PF02785 Biotin carboxylase C-terminal domain M1S46_02445 PF00364 Biotin-requiring enzyme M1S46_02445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S46_02445 PF00289 Biotin carboxylase, N-terminal domain M1S46_02455 PF04386 Stringent starvation protein B M1S46_02460 PF00043 Glutathione S-transferase, C-terminal domain M1S46_02460 PF13417 Glutathione S-transferase, N-terminal domain M1S46_02465 PF00380 Ribosomal protein S9/S16 M1S46_02470 PF00572 Ribosomal protein L13 M1S46_02475 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S46_02480 PF00398 Ribosomal RNA adenine dimethylase M1S46_02485 PF00149 Calcineurin-like phosphoesterase M1S46_02505 PF01926 50S ribosome-binding GTPase M1S46_02505 PF16360 GTP-binding GTPase Middle Region M1S46_02505 PF13167 GTP-binding GTPase N-terminal M1S46_02515 PF13091 PLD-like domain M1S46_02520 PF00149 Calcineurin-like phosphoesterase M1S46_02520 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S46_02525 PF00691 OmpA family M1S46_02525 PF01389 OmpA-like transmembrane domain M1S46_02530 PF17152 Periplasmic sensor domain M1S46_02530 PF00990 Diguanylate cyclase, GGDEF domain M1S46_02565 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_02565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S46_02575 PF04273 Putative phosphatase (DUF442) M1S46_02575 PF00753 Metallo-beta-lactamase superfamily M1S46_02580 PF00561 alpha/beta hydrolase fold M1S46_02585 PF00085 Thioredoxin M1S46_02590 PF03061 Thioesterase superfamily M1S46_02600 PF04461 Protein of unknown function (DUF520) M1S46_02610 PF01266 FAD dependent oxidoreductase M1S46_02610 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S46_02620 PF03795 YCII-related domain M1S46_02625 PF04279 Intracellular septation protein A M1S46_02630 PF02811 PHP domain M1S46_02635 PF01062 Bestrophin, RFP-TM, chloride channel M1S46_02640 PF04002 RadC-like JAB domain M1S46_02645 PF04127 DNA / pantothenate metabolism flavoprotein M1S46_02645 PF02441 Flavoprotein M1S46_02650 PF07549 SecD/SecF GG Motif M1S46_02650 PF02355 Protein export membrane protein M1S46_02655 PF07549 SecD/SecF GG Motif M1S46_02655 PF13721 SecD export protein N-terminal TM region M1S46_02655 PF02355 Protein export membrane protein M1S46_02660 PF02699 Preprotein translocase subunit M1S46_02665 PF01702 Queuine tRNA-ribosyltransferase M1S46_02680 PF02547 Queuosine biosynthesis protein M1S46_02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_02690 PF07689 KaiB domain M1S46_02690 PF00512 His Kinase A (phospho-acceptor) domain M1S46_02695 PF08335 GlnD PII-uridylyltransferase M1S46_02695 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S46_02700 PF01063 Amino-transferase class IV M1S46_02715 PF01522 Polysaccharide deacetylase M1S46_02720 PF00535 Glycosyl transferase family 2 M1S46_02725 PF13439 Glycosyltransferase Family 4 M1S46_02725 PF00534 Glycosyl transferases group 1 M1S46_02750 PF17101 Stealth protein CR1, conserved region 1 M1S46_02750 PF11380 Stealth protein CR2, conserved region 2 M1S46_02750 PF17102 Stealth protein CR3, conserved region 3 M1S46_02755 PF00152 tRNA synthetases class II (D, K and N) M1S46_02755 PF02938 GAD domain M1S46_02755 PF01336 OB-fold nucleic acid binding domain M1S46_02765 PF07715 TonB-dependent Receptor Plug Domain M1S46_02765 PF00593 TonB dependent receptor M1S46_02785 PF06146 Phosphate-starvation-inducible E M1S46_02790 PF00043 Glutathione S-transferase, C-terminal domain M1S46_02790 PF02798 Glutathione S-transferase, N-terminal domain M1S46_02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_02795 PF03466 LysR substrate binding domain M1S46_02800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_02800 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_02800 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S46_02800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_02805 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S46_02805 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_02815 PF00672 HAMP domain M1S46_02815 PF00512 His Kinase A (phospho-acceptor) domain M1S46_02815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_02820 PF00072 Response regulator receiver domain M1S46_02820 PF00486 Transcriptional regulatory protein, C terminal M1S46_02825 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S46_02845 PF01923 Cobalamin adenosyltransferase M1S46_02850 PF00593 TonB dependent receptor M1S46_02850 PF07715 TonB-dependent Receptor Plug Domain M1S46_02855 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S46_02860 PF00291 Pyridoxal-phosphate dependent enzyme M1S46_02885 PF00290 Tryptophan synthase alpha chain M1S46_02890 PF01039 Carboxyl transferase domain M1S46_02895 PF02875 Mur ligase family, glutamate ligase domain M1S46_02895 PF08245 Mur ligase middle domain M1S46_02910 PF00753 Metallo-beta-lactamase superfamily M1S46_02915 PF00578 AhpC/TSA family M1S46_02915 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S46_02920 PF07516 SecA Wing and Scaffold domain M1S46_02920 PF01043 SecA preprotein cross-linking domain M1S46_02920 PF07517 SecA DEAD-like domain M1S46_02920 PF02810 SEC-C motif M1S46_02930 PF07690 Major Facilitator Superfamily M1S46_02930 PF00083 Sugar (and other) transporter M1S46_02935 PF03006 Haemolysin-III related M1S46_02960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S46_02960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S46_02960 PF00378 Enoyl-CoA hydratase/isomerase M1S46_02965 PF00108 Thiolase, N-terminal domain M1S46_02965 PF02803 Thiolase, C-terminal domain M1S46_02970 PF02311 AraC-like ligand binding domain M1S46_02970 PF12833 Helix-turn-helix domain M1S46_02975 PF02515 CoA-transferase family III M1S46_02980 PF04966 Carbohydrate-selective porin, OprB family M1S46_02985 PF01011 PQQ enzyme repeat M1S46_02990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S46_02990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S46_03000 PF00893 Small Multidrug Resistance protein M1S46_03010 PF02803 Thiolase, C-terminal domain M1S46_03010 PF00108 Thiolase, N-terminal domain M1S46_03020 PF00691 OmpA family M1S46_03020 PF13505 Outer membrane protein beta-barrel domain M1S46_03030 PF01139 tRNA-splicing ligase RtcB M1S46_03035 PF00324 Amino acid permease M1S46_03040 PF05175 Methyltransferase small domain M1S46_03040 PF08468 Methyltransferase small domain N-terminal M1S46_03045 PF00860 Permease family M1S46_03050 PF03144 Elongation factor Tu domain 2 M1S46_03050 PF00009 Elongation factor Tu GTP binding domain M1S46_03050 PF00679 Elongation factor G C-terminus M1S46_03055 PF01741 Large-conductance mechanosensitive channel, MscL M1S46_03070 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S46_03070 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S46_03070 PF06827 Zinc finger found in FPG and IleRS M1S46_03075 PF02245 Methylpurine-DNA glycosylase (MPG) M1S46_03095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S46_03110 PF10411 Disulfide bond isomerase protein N-terminus M1S46_03110 PF13098 Thioredoxin-like domain M1S46_03115 PF01571 Aminomethyltransferase folate-binding domain M1S46_03125 PF04343 Protein of unknown function, DUF488 M1S46_03130 PF03831 PhnA domain M1S46_03130 PF08274 PhnA Zinc-Ribbon M1S46_03135 PF07411 Domain of unknown function (DUF1508) M1S46_03140 PF03129 Anticodon binding domain M1S46_03140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S46_03140 PF04073 Aminoacyl-tRNA editing domain M1S46_03160 PF00072 Response regulator receiver domain M1S46_03165 PF00072 Response regulator receiver domain M1S46_03170 PF01584 CheW-like domain M1S46_03175 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S46_03175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S46_03180 PF01627 Hpt domain M1S46_03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_03180 PF00072 Response regulator receiver domain M1S46_03180 PF01584 CheW-like domain M1S46_03190 PF07687 Peptidase dimerisation domain M1S46_03190 PF01546 Peptidase family M20/M25/M40 M1S46_03195 PF08085 Entericidin EcnA/B family M1S46_03205 PF04304 Protein of unknown function (DUF454) M1S46_03210 PF03734 L,D-transpeptidase catalytic domain M1S46_03210 PF17969 L,D-transpeptidase C-terminal domain M1S46_03250 PF00667 FAD binding domain M1S46_03250 PF00175 Oxidoreductase NAD-binding domain M1S46_03250 PF00258 Flavodoxin M1S46_03260 PF12805 FUSC-like inner membrane protein yccS M1S46_03265 PF07690 Major Facilitator Superfamily M1S46_03270 PF00881 Nitroreductase family M1S46_03285 PF01235 Sodium:alanine symporter family M1S46_03290 PF01734 Patatin-like phospholipase M1S46_03295 PF13291 ACT domain M1S46_03295 PF00291 Pyridoxal-phosphate dependent enzyme M1S46_03300 PF05992 SbmA/BacA-like family M1S46_03330 PF02934 GatB/GatE catalytic domain M1S46_03330 PF02637 GatB domain M1S46_03335 PF01425 Amidase M1S46_03340 PF02686 Glu-tRNAGln amidotransferase C subunit M1S46_03350 PF04085 rod shape-determining protein MreC M1S46_03355 PF04093 rod shape-determining protein MreD M1S46_03360 PF02545 Maf-like protein M1S46_03365 PF00575 S1 RNA binding domain M1S46_03365 PF10150 Ribonuclease E/G family M1S46_03375 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S46_03375 PF06974 Protein of unknown function (DUF1298) M1S46_03380 PF01507 Phosphoadenosine phosphosulfate reductase family M1S46_03395 PF02525 Flavodoxin-like fold M1S46_03415 PF02673 Bacitracin resistance protein BacA M1S46_03420 PF06719 AraC-type transcriptional regulator N-terminus M1S46_03420 PF12833 Helix-turn-helix domain M1S46_03425 PF14765 Polyketide synthase dehydratase M1S46_03425 PF00550 Phosphopantetheine attachment site M1S46_03425 PF08659 KR domain M1S46_03425 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S46_03425 PF16197 Ketoacyl-synthetase C-terminal extension M1S46_03425 PF09277 Erythronolide synthase, docking M1S46_03425 PF08990 Erythronolide synthase docking M1S46_03425 PF08240 Alcohol dehydrogenase GroES-like domain M1S46_03425 PF00698 Acyl transferase domain M1S46_03425 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S46_03430 PF01965 DJ-1/PfpI family M1S46_03440 PF00324 Amino acid permease M1S46_03445 PF04303 PrpF protein M1S46_03450 PF00348 Polyprenyl synthetase M1S46_03455 PF04237 YjbR M1S46_03460 PF01145 SPFH domain / Band 7 family M1S46_03470 PF01734 Patatin-like phospholipase M1S46_03490 PF00884 Sulfatase M1S46_03490 PF08019 Phosphoethanolamine transferase EptA/EptB M1S46_03495 PF00072 Response regulator receiver domain M1S46_03495 PF00486 Transcriptional regulatory protein, C terminal M1S46_03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_03500 PF08521 Two-component sensor kinase N-terminal M1S46_03500 PF00512 His Kinase A (phospho-acceptor) domain M1S46_03510 PF00909 Ammonium Transporter Family M1S46_03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_03515 PF03466 LysR substrate binding domain M1S46_03535 PF08264 Anticodon-binding domain of tRNA M1S46_03535 PF10458 Valyl tRNA synthetase tRNA binding arm M1S46_03535 PF00133 tRNA synthetases class I (I, L, M and V) M1S46_03555 PF01906 Putative heavy-metal-binding M1S46_03560 PF01906 Putative heavy-metal-binding M1S46_03565 PF02321 Outer membrane efflux protein M1S46_03570 PF00873 AcrB/AcrD/AcrF family M1S46_03575 PF00529 HlyD membrane-fusion protein of T1SS M1S46_03575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S46_03580 PF01569 PAP2 superfamily M1S46_03590 PF00348 Polyprenyl synthetase M1S46_03600 PF00829 Ribosomal prokaryotic L21 protein M1S46_03605 PF01016 Ribosomal L27 protein M1S46_03610 PF03548 Outer membrane lipoprotein carrier protein LolA M1S46_03620 PF02403 Seryl-tRNA synthetase N-terminal domain M1S46_03620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S46_03625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S46_03625 PF14824 Sirohaem biosynthesis protein central M1S46_03625 PF10414 Sirohaem synthase dimerisation region M1S46_03630 PF00588 SpoU rRNA Methylase family M1S46_03635 PF01638 HxlR-like helix-turn-helix M1S46_03640 PF03358 NADPH-dependent FMN reductase M1S46_03645 PF13520 Amino acid permease M1S46_03650 PF00465 Iron-containing alcohol dehydrogenase M1S46_03660 PF03099 Biotin/lipoate A/B protein ligase family M1S46_03665 PF04359 Protein of unknown function (DUF493) M1S46_03670 PF04546 Sigma-70, non-essential region M1S46_03670 PF03979 Sigma-70 factor, region 1.1 M1S46_03670 PF00140 Sigma-70 factor, region 1.2 M1S46_03670 PF04542 Sigma-70 region 2 M1S46_03670 PF04539 Sigma-70 region 3 M1S46_03670 PF04545 Sigma-70, region 4 M1S46_03690 PF00581 Rhodanese-like domain M1S46_03690 PF17773 UPF0176 acylphosphatase like domain M1S46_03700 PF00285 Citrate synthase, C-terminal domain M1S46_03705 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S46_03710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S46_03715 PF02910 Fumarate reductase flavoprotein C-term M1S46_03715 PF00890 FAD binding domain M1S46_03720 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S46_03735 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S46_03735 PF00676 Dehydrogenase E1 component M1S46_03735 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S46_03735 PF02779 Transketolase, pyrimidine binding domain M1S46_03740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S46_03740 PF00364 Biotin-requiring enzyme M1S46_03740 PF02817 e3 binding domain M1S46_03745 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_03745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S46_03750 PF08442 ATP-grasp domain M1S46_03750 PF00549 CoA-ligase M1S46_03755 PF02629 CoA binding domain M1S46_03755 PF00549 CoA-ligase M1S46_03760 PF00579 tRNA synthetases class I (W and Y) M1S46_03765 PF05661 Protein of unknown function (DUF808) M1S46_03770 PF04228 Putative neutral zinc metallopeptidase M1S46_03775 PF00999 Sodium/hydrogen exchanger family M1S46_03790 PF09587 Bacterial capsule synthesis protein PGA_cap M1S46_03800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S46_03805 PF00582 Universal stress protein family M1S46_03810 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_03815 PF03449 Transcription elongation factor, N-terminal M1S46_03815 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S46_03820 PF02142 MGS-like domain M1S46_03820 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S46_03820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S46_03825 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S46_03825 PF00117 Glutamine amidotransferase class-I M1S46_03840 PF01985 CRS1 / YhbY (CRM) domain M1S46_03845 PF01728 FtsJ-like methyltransferase M1S46_03850 PF00004 ATPase family associated with various cellular activities (AAA) M1S46_03850 PF17862 AAA+ lid domain M1S46_03850 PF06480 FtsH Extracellular M1S46_03850 PF01434 Peptidase family M41 M1S46_03855 PF00809 Pterin binding enzyme M1S46_03875 PF16655 PhoD-like phosphatase, N-terminal domain M1S46_03875 PF09423 PhoD-like phosphatase M1S46_03890 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S46_03890 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S46_03905 PF00083 Sugar (and other) transporter M1S46_03910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S46_03910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S46_03915 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S46_03915 PF01266 FAD dependent oxidoreductase M1S46_03920 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S46_03920 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S46_03925 PF00781 Diacylglycerol kinase catalytic domain M1S46_03930 PF00149 Calcineurin-like phosphoesterase M1S46_03940 PF00166 Chaperonin 10 Kd subunit M1S46_03945 PF00118 TCP-1/cpn60 chaperonin family M1S46_03950 PF01219 Prokaryotic diacylglycerol kinase M1S46_03960 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S46_03965 PF00873 AcrB/AcrD/AcrF family M1S46_03975 PF01435 Peptidase family M48 M1S46_03980 PF01464 Transglycosylase SLT domain M1S46_03985 PF01171 PP-loop family M1S46_03995 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S46_03995 PF01464 Transglycosylase SLT domain M1S46_04000 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S46_04000 PF03449 Transcription elongation factor, N-terminal M1S46_04015 PF00975 Thioesterase domain M1S46_04015 PF00501 AMP-binding enzyme M1S46_04015 PF13193 AMP-binding enzyme C-terminal domain M1S46_04015 PF00668 Condensation domain M1S46_04015 PF00550 Phosphopantetheine attachment site M1S46_04045 PF00881 Nitroreductase family M1S46_04060 PF02595 Glycerate kinase family M1S46_04065 PF00384 Molybdopterin oxidoreductase M1S46_04070 PF02634 FdhD/NarQ family M1S46_04075 PF06803 Protein of unknown function (DUF1232) M1S46_04080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S46_04080 PF11890 Domain of unknown function (DUF3410) M1S46_04080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S46_04085 PF00152 tRNA synthetases class II (D, K and N) M1S46_04095 PF18073 Rubredoxin metal binding domain M1S46_04100 PF00324 Amino acid permease M1S46_04110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S46_04110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S46_04115 PF01678 Diaminopimelate epimerase M1S46_04120 PF01810 LysE type translocator M1S46_04125 PF00589 Phage integrase family M1S46_04125 PF02899 Phage integrase, N-terminal SAM-like domain M1S46_04130 PF01012 Electron transfer flavoprotein domain M1S46_04135 PF00766 Electron transfer flavoprotein FAD-binding domain M1S46_04135 PF01012 Electron transfer flavoprotein domain M1S46_04140 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S46_04140 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S46_04155 PF00535 Glycosyl transferase family 2 M1S46_04175 PF13533 Biotin-lipoyl like M1S46_04185 PF00266 Aminotransferase class-V M1S46_04200 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S46_04210 PF02687 FtsX-like permease family M1S46_04210 PF12704 MacB-like periplasmic core domain M1S46_04215 PF00005 ABC transporter M1S46_04220 PF03772 Competence protein M1S46_04220 PF13567 Domain of unknown function (DUF4131) M1S46_04220 PF00753 Metallo-beta-lactamase superfamily M1S46_04230 PF01343 Peptidase family S49 M1S46_04230 PF06965 Na+/H+ antiporter 1 M1S46_04235 PF12697 Alpha/beta hydrolase family M1S46_04240 PF00551 Formyl transferase M1S46_04245 PF02769 AIR synthase related protein, C-terminal domain M1S46_04245 PF00586 AIR synthase related protein, N-terminal domain M1S46_04250 PF01594 AI-2E family transporter M1S46_04255 PF00308 Bacterial dnaA protein M1S46_04255 PF08299 Bacterial dnaA protein helix-turn-helix M1S46_04255 PF11638 DnaA N-terminal domain M1S46_04285 PF00588 SpoU rRNA Methylase family M1S46_04285 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S46_04290 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S46_04300 PF00691 OmpA family M1S46_04305 PF04052 TolB amino-terminal domain M1S46_04305 PF07676 WD40-like Beta Propeller Repeat M1S46_04315 PF02472 Biopolymer transport protein ExbD/TolR M1S46_04320 PF01618 MotA/TolQ/ExbB proton channel family M1S46_04325 PF03061 Thioesterase superfamily M1S46_04330 PF01546 Peptidase family M20/M25/M40 M1S46_04330 PF07687 Peptidase dimerisation domain M1S46_04335 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S46_04335 PF17864 RuvB AAA lid domain M1S46_04335 PF05491 RuvB C-terminal winged helix domain M1S46_04340 PF07499 RuvA, C-terminal domain M1S46_04340 PF01330 RuvA N terminal domain M1S46_04345 PF01966 HD domain M1S46_04350 PF02769 AIR synthase related protein, C-terminal domain M1S46_04350 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S46_04350 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S46_04355 PF07690 Major Facilitator Superfamily M1S46_04360 PF01784 NIF3 (NGG1p interacting factor 3) M1S46_04365 PF00378 Enoyl-CoA hydratase/isomerase M1S46_04370 PF00293 NUDIX domain M1S46_04370 PF01467 Cytidylyltransferase-like M1S46_04380 PF00578 AhpC/TSA family M1S46_04395 PF06508 Queuosine biosynthesis protein QueC M1S46_04405 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S46_04405 PF14602 Hexapeptide repeat of succinyl-transferase M1S46_04405 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_04415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_04415 PF03466 LysR substrate binding domain M1S46_04420 PF00005 ABC transporter M1S46_04420 PF12857 TOBE-like domain M1S46_04425 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_04430 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_04445 PF01063 Amino-transferase class IV M1S46_04450 PF02618 YceG-like family M1S46_04455 PF02223 Thymidylate kinase M1S46_04465 PF00890 FAD binding domain M1S46_04465 PF02910 Fumarate reductase flavoprotein C-term M1S46_04470 PF13180 PDZ domain M1S46_04480 PF00679 Elongation factor G C-terminus M1S46_04480 PF00009 Elongation factor Tu GTP binding domain M1S46_04480 PF03144 Elongation factor Tu domain 2 M1S46_04480 PF06421 GTP-binding protein LepA C-terminus M1S46_04485 PF10502 Signal peptidase, peptidase S26 M1S46_04495 PF00035 Double-stranded RNA binding motif M1S46_04495 PF14622 Ribonuclease-III-like M1S46_04500 PF07650 KH domain M1S46_04500 PF01926 50S ribosome-binding GTPase M1S46_04510 PF02565 Recombination protein O C terminal M1S46_04510 PF11967 Recombination protein O N terminal M1S46_04515 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S46_04520 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S46_04525 PF00106 short chain dehydrogenase M1S46_04555 PF00155 Aminotransferase class I and II M1S46_04565 PF00990 Diguanylate cyclase, GGDEF domain M1S46_04565 PF17151 Periplasmic sensor domain M1S46_04575 PF00271 Helicase conserved C-terminal domain M1S46_04575 PF04851 Type III restriction enzyme, res subunit M1S46_04575 PF02151 UvrB/uvrC motif M1S46_04575 PF12344 Ultra-violet resistance protein B M1S46_04575 PF17757 UvrB interaction domain M1S46_04585 PF00892 EamA-like transporter family M1S46_04590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S46_04590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S46_04605 PF01018 GTP1/OBG M1S46_04605 PF01926 50S ribosome-binding GTPase M1S46_04610 PF00696 Amino acid kinase family M1S46_04610 PF01472 PUA domain M1S46_04620 PF07759 Protein of unknown function (DUF1615) M1S46_04625 PF01207 Dihydrouridine synthase (Dus) M1S46_04630 PF03060 Nitronate monooxygenase M1S46_04645 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S46_04675 PF00875 DNA photolyase M1S46_04675 PF03441 FAD binding domain of DNA photolyase M1S46_04680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S46_04685 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_04690 PF07943 Penicillin-binding protein 5, C-terminal domain M1S46_04690 PF00768 D-alanyl-D-alanine carboxypeptidase M1S46_04700 PF03971 Monomeric isocitrate dehydrogenase M1S46_04705 PF00849 RNA pseudouridylate synthase M1S46_04710 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S46_04730 PF06779 Uncharacterised MFS-type transporter YbfB M1S46_04735 PF03466 LysR substrate binding domain M1S46_04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_04740 PF00375 Sodium:dicarboxylate symporter family M1S46_04745 PF02567 Phenazine biosynthesis-like protein M1S46_04750 PF05193 Peptidase M16 inactive domain M1S46_04750 PF00675 Insulinase (Peptidase family M16) M1S46_04775 PF02581 Thiamine monophosphate synthase M1S46_04780 PF00202 Aminotransferase class-III M1S46_04790 PF00849 RNA pseudouridylate synthase M1S46_04795 PF12137 RNA polymerase recycling family C-terminal M1S46_04795 PF18337 RapA N-terminal Tudor like domain M1S46_04795 PF18339 RapA N-terminal Tudor like domain 1 M1S46_04795 PF00176 SNF2 family N-terminal domain M1S46_04795 PF00271 Helicase conserved C-terminal domain M1S46_04805 PF00440 Bacterial regulatory proteins, tetR family M1S46_04810 PF00970 Oxidoreductase FAD-binding domain M1S46_04810 PF00175 Oxidoreductase NAD-binding domain M1S46_04810 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S46_04815 PF00487 Fatty acid desaturase M1S46_04825 PF00440 Bacterial regulatory proteins, tetR family M1S46_04825 PF17754 MftR C-terminal domain M1S46_04835 PF00202 Aminotransferase class-III M1S46_04840 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S46_04845 PF00171 Aldehyde dehydrogenase family M1S46_04850 PF01037 Lrp/AsnC ligand binding domain M1S46_04855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S46_04855 PF00205 Thiamine pyrophosphate enzyme, central domain M1S46_04855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S46_04860 PF00324 Amino acid permease M1S46_04865 PF12849 PBP superfamily domain M1S46_04870 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_04875 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_04880 PF00005 ABC transporter M1S46_04885 PF01343 Peptidase family S49 M1S46_04885 PF08496 Peptidase family S49 N-terminal M1S46_04900 PF08328 Adenylosuccinate lyase C-terminal M1S46_04900 PF00206 Lyase M1S46_04905 PF04356 Protein of unknown function (DUF489) M1S46_04915 PF00293 NUDIX domain M1S46_04915 PF13344 Haloacid dehalogenase-like hydrolase M1S46_04920 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_04925 PF00768 D-alanyl-D-alanine carboxypeptidase M1S46_04925 PF07943 Penicillin-binding protein 5, C-terminal domain M1S46_04940 PF01975 Survival protein SurE M1S46_04945 PF01476 LysM domain M1S46_04945 PF01551 Peptidase family M23 M1S46_04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_04950 PF03466 LysR substrate binding domain M1S46_04955 PF13654 AAA domain M1S46_04955 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S46_04960 PF07690 Major Facilitator Superfamily M1S46_04965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S46_04970 PF13593 SBF-like CPA transporter family (DUF4137) M1S46_04975 PF01197 Ribosomal protein L31 M1S46_04990 PF04055 Radical SAM superfamily M1S46_04995 PF09285 Elongation factor P, C-terminal M1S46_04995 PF08207 Elongation factor P (EF-P) KOW-like domain M1S46_04995 PF01132 Elongation factor P (EF-P) OB domain M1S46_05000 PF02554 Carbon starvation protein CstA M1S46_05000 PF13722 5TM C-terminal transporter carbon starvation CstA M1S46_05005 PF04328 Selenoprotein, putative M1S46_05040 PF06018 CodY GAF-like domain M1S46_05040 PF17853 GGDEF-like domain M1S46_05040 PF13556 PucR C-terminal helix-turn-helix domain M1S46_05055 PF00171 Aldehyde dehydrogenase family M1S46_05060 PF00324 Amino acid permease M1S46_05070 PF03466 LysR substrate binding domain M1S46_05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_05075 PF02028 BCCT, betaine/carnitine/choline family transporter M1S46_05095 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S46_05095 PF00355 Rieske [2Fe-2S] domain M1S46_05100 PF00171 Aldehyde dehydrogenase family M1S46_05110 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_05110 PF18113 Rubredoxin binding C-terminal domain M1S46_05115 PF01266 FAD dependent oxidoreductase M1S46_05115 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S46_05130 PF00665 Integrase core domain M1S46_05160 PF00582 Universal stress protein family M1S46_05165 PF00916 Sulfate permease family M1S46_05165 PF01740 STAS domain M1S46_05190 PF00892 EamA-like transporter family M1S46_05200 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S46_05205 PF00083 Sugar (and other) transporter M1S46_05210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S46_05210 PF13378 Enolase C-terminal domain-like M1S46_05215 PF08990 Erythronolide synthase docking M1S46_05215 PF14765 Polyketide synthase dehydratase M1S46_05215 PF00550 Phosphopantetheine attachment site M1S46_05215 PF08659 KR domain M1S46_05215 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S46_05215 PF16197 Ketoacyl-synthetase C-terminal extension M1S46_05215 PF00698 Acyl transferase domain M1S46_05215 PF08240 Alcohol dehydrogenase GroES-like domain M1S46_05215 PF09277 Erythronolide synthase, docking M1S46_05215 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S46_05220 PF00440 Bacterial regulatory proteins, tetR family M1S46_05240 PF02678 Pirin M1S46_05240 PF17954 Quercetinase C-terminal cupin domain M1S46_05250 PF13309 HTH domain M1S46_05250 PF08348 YheO-like PAS domain M1S46_05260 PF00501 AMP-binding enzyme M1S46_05260 PF00550 Phosphopantetheine attachment site M1S46_05260 PF13193 AMP-binding enzyme C-terminal domain M1S46_05260 PF00668 Condensation domain M1S46_05265 PF00668 Condensation domain M1S46_05265 PF00501 AMP-binding enzyme M1S46_05265 PF13193 AMP-binding enzyme C-terminal domain M1S46_05265 PF00975 Thioesterase domain M1S46_05265 PF00550 Phosphopantetheine attachment site M1S46_05270 PF01032 FecCD transport family M1S46_05275 PF01032 FecCD transport family M1S46_05280 PF00005 ABC transporter M1S46_05285 PF01497 Periplasmic binding protein M1S46_05290 PF00593 TonB dependent receptor M1S46_05290 PF07715 TonB-dependent Receptor Plug Domain M1S46_05295 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S46_05300 PF00501 AMP-binding enzyme M1S46_05300 PF00668 Condensation domain M1S46_05300 PF00550 Phosphopantetheine attachment site M1S46_05305 PF00501 AMP-binding enzyme M1S46_05305 PF13193 AMP-binding enzyme C-terminal domain M1S46_05310 PF00857 Isochorismatase family M1S46_05310 PF00550 Phosphopantetheine attachment site M1S46_05315 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S46_05325 PF00005 ABC transporter M1S46_05330 PF00005 ABC transporter M1S46_05335 PF00975 Thioesterase domain M1S46_05345 PF00425 chorismate binding enzyme M1S46_05355 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S46_05360 PF05675 Protein of unknown function (DUF817) M1S46_05375 PF00144 Beta-lactamase M1S46_05385 PF01227 GTP cyclohydrolase I M1S46_05390 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S46_05390 PF01799 [2Fe-2S] binding domain M1S46_05395 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S46_05395 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S46_05410 PF00218 Indole-3-glycerol phosphate synthase M1S46_05415 PF02885 Glycosyl transferase family, helical bundle domain M1S46_05415 PF00591 Glycosyl transferase family, a/b domain M1S46_05420 PF07715 TonB-dependent Receptor Plug Domain M1S46_05420 PF00593 TonB dependent receptor M1S46_05425 PF11838 ERAP1-like C-terminal domain M1S46_05425 PF01433 Peptidase family M1 domain M1S46_05430 PF00117 Glutamine amidotransferase class-I M1S46_05440 PF00854 POT family M1S46_05445 PF03951 Glutamine synthetase, beta-Grasp domain M1S46_05445 PF00120 Glutamine synthetase, catalytic domain M1S46_05450 PF04345 Chorismate lyase M1S46_05455 PF01040 UbiA prenyltransferase family M1S46_05490 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S46_05490 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S46_05495 PF01784 NIF3 (NGG1p interacting factor 3) M1S46_05500 PF13180 PDZ domain M1S46_05505 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S46_05505 PF01743 Poly A polymerase head domain M1S46_05510 PF00390 Malic enzyme, N-terminal domain M1S46_05510 PF03949 Malic enzyme, NAD binding domain M1S46_05510 PF01515 Phosphate acetyl/butaryl transferase M1S46_05515 PF00563 EAL domain M1S46_05515 PF00990 Diguanylate cyclase, GGDEF domain M1S46_05515 PF03707 Bacterial signalling protein N terminal repeat M1S46_05520 PF04452 RNA methyltransferase M1S46_05525 PF02219 Methylenetetrahydrofolate reductase M1S46_05530 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S46_05530 PF05221 S-adenosyl-L-homocysteine hydrolase M1S46_05545 PF09317 Domain of unknown function (DUF1974) M1S46_05545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_05545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_05550 PF04055 Radical SAM superfamily M1S46_05555 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_05555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S46_05565 PF07690 Major Facilitator Superfamily M1S46_05575 PF00557 Metallopeptidase family M24 M1S46_05580 PF00318 Ribosomal protein S2 M1S46_05585 PF00889 Elongation factor TS M1S46_05595 PF12833 Helix-turn-helix domain M1S46_05615 PF03330 Lytic transglycolase M1S46_05615 PF05036 Sporulation related domain M1S46_05620 PF13406 Transglycosylase SLT domain M1S46_05625 PF01098 Cell cycle protein M1S46_05635 PF14489 QueF-like protein M1S46_05635 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S46_05640 PF01061 ABC-2 type transporter M1S46_05645 PF00005 ABC transporter M1S46_05675 PF00464 Serine hydroxymethyltransferase M1S46_05680 PF02321 Outer membrane efflux protein M1S46_05685 PF00873 AcrB/AcrD/AcrF family M1S46_05690 PF13533 Biotin-lipoyl like M1S46_05695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_05695 PF03466 LysR substrate binding domain M1S46_05700 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S46_05705 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_05710 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_05715 PF00005 ABC transporter M1S46_05720 PF00893 Small Multidrug Resistance protein M1S46_05725 PF00037 4Fe-4S binding domain M1S46_05730 PF01136 Peptidase family U32 M1S46_05730 PF16325 Peptidase family U32 C-terminal domain M1S46_05735 PF00155 Aminotransferase class I and II M1S46_05735 PF00392 Bacterial regulatory proteins, gntR family M1S46_05740 PF02567 Phenazine biosynthesis-like protein M1S46_05745 PF00970 Oxidoreductase FAD-binding domain M1S46_05745 PF00175 Oxidoreductase NAD-binding domain M1S46_05750 PF01980 tRNA-methyltransferase O M1S46_05750 PF18389 TrmO C-terminal domain M1S46_05765 PF00665 Integrase core domain M1S46_05795 PF00582 Universal stress protein family M1S46_05800 PF01740 STAS domain M1S46_05800 PF00916 Sulfate permease family M1S46_05815 PF00437 Type II/IV secretion system protein M1S46_05815 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S46_05825 PF00072 Response regulator receiver domain M1S46_05825 PF00486 Transcriptional regulatory protein, C terminal M1S46_05830 PF00512 His Kinase A (phospho-acceptor) domain M1S46_05830 PF08521 Two-component sensor kinase N-terminal M1S46_05830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_05840 PF00293 NUDIX domain M1S46_05850 PF00912 Transglycosylase M1S46_05850 PF00905 Penicillin binding protein transpeptidase domain M1S46_05850 PF14814 Bifunctional transglycosylase second domain M1S46_05855 PF01513 ATP-NAD kinase M1S46_05860 PF07023 Protein of unknown function (DUF1315) M1S46_05865 PF02885 Glycosyl transferase family, helical bundle domain M1S46_05865 PF00591 Glycosyl transferase family, a/b domain M1S46_05870 PF00375 Sodium:dicarboxylate symporter family M1S46_05875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_05875 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_05875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_05880 PF00756 Putative esterase M1S46_05885 PF01817 Chorismate mutase type II M1S46_05885 PF01842 ACT domain M1S46_05885 PF00800 Prephenate dehydratase M1S46_05890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S46_05900 PF07687 Peptidase dimerisation domain M1S46_05900 PF01546 Peptidase family M20/M25/M40 M1S46_05905 PF12706 Beta-lactamase superfamily domain M1S46_05915 PF03883 Peroxide stress protein YaaA M1S46_05925 PF05690 Thiazole biosynthesis protein ThiG M1S46_05935 PF04241 Protein of unknown function (DUF423) M1S46_05940 PF04542 Sigma-70 region 2 M1S46_05940 PF04545 Sigma-70, region 4 M1S46_05940 PF00140 Sigma-70 factor, region 1.2 M1S46_05955 PF00313 'Cold-shock' DNA-binding domain M1S46_05960 PF00270 DEAD/DEAH box helicase M1S46_05960 PF00271 Helicase conserved C-terminal domain M1S46_05970 PF00881 Nitroreductase family M1S46_05975 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S46_05975 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S46_05985 PF00589 Phage integrase family M1S46_06315 PF01180 Dihydroorotate dehydrogenase M1S46_06320 PF02674 Colicin V production protein M1S46_06325 PF00156 Phosphoribosyl transferase domain M1S46_06340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S46_06340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S46_06345 PF01435 Peptidase family M48 M1S46_06350 PF09424 Yqey-like protein M1S46_06355 PF01165 Ribosomal protein S21 M1S46_06360 PF00814 Glycoprotease family M1S46_06380 PF00069 Protein kinase domain M1S46_06405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_06405 PF03466 LysR substrate binding domain M1S46_06410 PF00202 Aminotransferase class-III M1S46_06415 PF00171 Aldehyde dehydrogenase family M1S46_06420 PF00324 Amino acid permease M1S46_06450 PF04076 Bacterial OB fold (BOF) protein M1S46_06475 PF00561 alpha/beta hydrolase fold M1S46_06480 PF03616 Sodium/glutamate symporter M1S46_06490 PF07729 FCD domain M1S46_06490 PF00392 Bacterial regulatory proteins, gntR family M1S46_06540 PF08946 Osmosensory transporter coiled coil M1S46_06540 PF00083 Sugar (and other) transporter M1S46_06570 PF13610 DDE domain M1S46_06585 PF13610 DDE domain M1S46_06595 PF01636 Phosphotransferase enzyme family M1S46_06600 PF13610 DDE domain M1S46_06615 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_06625 PF00893 Small Multidrug Resistance protein M1S46_06630 PF00809 Pterin binding enzyme M1S46_06645 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S46_06660 PF12848 ABC transporter M1S46_06660 PF00005 ABC transporter M1S46_06665 PF01636 Phosphotransferase enzyme family M1S46_06675 PF03050 Transposase IS66 family M1S46_06675 PF13005 zinc-finger binding domain of transposase IS66 M1S46_06675 PF13817 IS66 C-terminal element M1S46_06675 PF13007 Transposase C of IS166 homeodomain M1S46_06700 PF13610 DDE domain M1S46_06715 PF00375 Sodium:dicarboxylate symporter family M1S46_06725 PF00753 Metallo-beta-lactamase superfamily M1S46_06725 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S46_06730 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_06735 PF00005 ABC transporter M1S46_06735 PF09383 NIL domain M1S46_06740 PF03180 NLPA lipoprotein M1S46_06745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S46_06745 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S46_06745 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S46_06750 PF02142 MGS-like domain M1S46_06750 PF01808 AICARFT/IMPCHase bienzyme M1S46_06755 PF02954 Bacterial regulatory protein, Fis family M1S46_06775 PF01134 Glucose inhibited division protein A M1S46_06775 PF13932 GidA associated domain M1S46_06785 PF14403 Circularly permuted ATP-grasp type 2 M1S46_06795 PF01841 Transglutaminase-like superfamily M1S46_06795 PF08379 Bacterial transglutaminase-like N-terminal region M1S46_06805 PF01168 Alanine racemase, N-terminal domain M1S46_06805 PF00842 Alanine racemase, C-terminal domain M1S46_06810 PF03796 DnaB-like helicase C terminal domain M1S46_06810 PF00772 DnaB-like helicase N terminal domain M1S46_06815 PF01281 Ribosomal protein L9, N-terminal domain M1S46_06815 PF03948 Ribosomal protein L9, C-terminal domain M1S46_06820 PF01084 Ribosomal protein S18 M1S46_06825 PF01250 Ribosomal protein S6 M1S46_06830 PF01040 UbiA prenyltransferase family M1S46_06835 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S46_06840 PF00510 Cytochrome c oxidase subunit III M1S46_06845 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S46_06850 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S46_06850 PF06481 COX Aromatic Rich Motif M1S46_06860 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S46_06860 PF00391 PEP-utilising enzyme, mobile domain M1S46_06860 PF02896 PEP-utilising enzyme, TIM barrel domain M1S46_06865 PF03618 Kinase/pyrophosphorylase M1S46_06875 PF14883 Hypothetical glycosyl hydrolase family 13 M1S46_06875 PF01522 Polysaccharide deacetylase M1S46_06880 PF00535 Glycosyl transferase family 2 M1S46_06885 PF13994 PgaD-like protein M1S46_06895 PF00296 Luciferase-like monooxygenase M1S46_06910 PF03466 LysR substrate binding domain M1S46_06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_06920 PF00472 RF-1 domain M1S46_06920 PF03462 PCRF domain M1S46_06925 PF13847 Methyltransferase domain M1S46_06925 PF17827 PrmC N-terminal domain M1S46_06930 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_06935 PF09084 NMT1/THI5 like M1S46_06940 PF12833 Helix-turn-helix domain M1S46_06945 PF00106 short chain dehydrogenase M1S46_06950 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_06950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_06950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_06955 PF00501 AMP-binding enzyme M1S46_06955 PF13193 AMP-binding enzyme C-terminal domain M1S46_06960 PF01613 Flavin reductase like domain M1S46_06965 PF00899 ThiF family M1S46_06970 PF03109 ABC1 family M1S46_06985 PF03814 Potassium-transporting ATPase A subunit M1S46_06995 PF02669 K+-transporting ATPase, c chain M1S46_07000 PF13493 Domain of unknown function (DUF4118) M1S46_07000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_07000 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S46_07000 PF00512 His Kinase A (phospho-acceptor) domain M1S46_07005 PF00486 Transcriptional regulatory protein, C terminal M1S46_07005 PF00072 Response regulator receiver domain M1S46_07010 PF00120 Glutamine synthetase, catalytic domain M1S46_07020 PF03232 Ubiquinone biosynthesis protein COQ7 M1S46_07025 PF07690 Major Facilitator Superfamily M1S46_07030 PF07244 Surface antigen variable number repeat M1S46_07030 PF01103 Surface antigen M1S46_07030 PF17243 POTRA domain TamA domain 1 M1S46_07045 PF00330 Aconitase family (aconitate hydratase) M1S46_07045 PF06434 Aconitate hydratase 2 N-terminus M1S46_07045 PF11791 Aconitate B N-terminal domain M1S46_07055 PF00027 Cyclic nucleotide-binding domain M1S46_07055 PF00520 Ion transport protein M1S46_07060 PF07690 Major Facilitator Superfamily M1S46_07075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_07075 PF03466 LysR substrate binding domain M1S46_07080 PF04284 Protein of unknown function (DUF441) M1S46_07090 PF01479 S4 domain M1S46_07090 PF00849 RNA pseudouridylate synthase M1S46_07105 PF00849 RNA pseudouridylate synthase M1S46_07105 PF01479 S4 domain M1S46_07110 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S46_07115 PF08676 MutL C terminal dimerisation domain M1S46_07115 PF01119 DNA mismatch repair protein, C-terminal domain M1S46_07125 PF17209 Hfq protein M1S46_07135 PF00881 Nitroreductase family M1S46_07145 PF00149 Calcineurin-like phosphoesterase M1S46_07150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S46_07155 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S46_07155 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S46_07160 PF00117 Glutamine amidotransferase class-I M1S46_07160 PF00958 GMP synthase C terminal domain M1S46_07160 PF02540 NAD synthase M1S46_07165 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S46_07170 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S46_07175 PF13520 Amino acid permease M1S46_07180 PF00171 Aldehyde dehydrogenase family M1S46_07195 PF00465 Iron-containing alcohol dehydrogenase M1S46_07200 PF14493 Helix-turn-helix domain M1S46_07200 PF05970 PIF1-like helicase M1S46_07210 PF06445 GyrI-like small molecule binding domain M1S46_07215 PF02110 Hydroxyethylthiazole kinase family M1S46_07230 PF01433 Peptidase family M1 domain M1S46_07230 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S46_07230 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S46_07240 PF00106 short chain dehydrogenase M1S46_07250 PF01817 Chorismate mutase type II M1S46_07255 PF01037 Lrp/AsnC ligand binding domain M1S46_07270 PF00440 Bacterial regulatory proteins, tetR family M1S46_07275 PF00593 TonB dependent receptor M1S46_07275 PF07715 TonB-dependent Receptor Plug Domain M1S46_07280 PF00924 Mechanosensitive ion channel M1S46_07315 PF00593 TonB dependent receptor M1S46_07315 PF07715 TonB-dependent Receptor Plug Domain M1S46_07335 PF00005 ABC transporter M1S46_07335 PF12848 ABC transporter M1S46_07340 PF00582 Universal stress protein family M1S46_07365 PF00689 Cation transporting ATPase, C-terminus M1S46_07365 PF00690 Cation transporter/ATPase, N-terminus M1S46_07370 PF02308 MgtC family M1S46_07375 PF03594 Benzoate membrane transport protein M1S46_07380 PF01037 Lrp/AsnC ligand binding domain M1S46_07385 PF01810 LysE type translocator M1S46_07390 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S46_07395 PF03466 LysR substrate binding domain M1S46_07395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_07405 PF00108 Thiolase, N-terminal domain M1S46_07405 PF02803 Thiolase, C-terminal domain M1S46_07415 PF01575 MaoC like domain M1S46_07420 PF00144 Beta-lactamase M1S46_07430 PF07690 Major Facilitator Superfamily M1S46_07435 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S46_07435 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S46_07435 PF12169 DNA polymerase III subunits gamma and tau domain III M1S46_07440 PF04185 Phosphoesterase family M1S46_07440 PF05506 Domain of unknown function (DUF756) M1S46_07445 PF03061 Thioesterase superfamily M1S46_07450 PF00465 Iron-containing alcohol dehydrogenase M1S46_07460 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S46_07465 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S46_07465 PF01565 FAD binding domain M1S46_07480 PF01645 Conserved region in glutamate synthase M1S46_07500 PF12832 MFS_1 like family M1S46_07510 PF00289 Biotin carboxylase, N-terminal domain M1S46_07510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S46_07510 PF02785 Biotin carboxylase C-terminal domain M1S46_07515 PF00364 Biotin-requiring enzyme M1S46_07520 PF01220 Dehydroquinase class II M1S46_07525 PF11799 impB/mucB/samB family C-terminal domain M1S46_07525 PF00817 impB/mucB/samB family M1S46_07525 PF13438 Domain of unknown function (DUF4113) M1S46_07535 PF00005 ABC transporter M1S46_07540 PF00486 Transcriptional regulatory protein, C terminal M1S46_07540 PF00072 Response regulator receiver domain M1S46_07550 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_07550 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S46_07550 PF13806 Rieske-like [2Fe-2S] domain M1S46_07550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S46_07550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S46_07550 PF04324 BFD-like [2Fe-2S] binding domain M1S46_07555 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S46_07555 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S46_07555 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_07555 PF04324 BFD-like [2Fe-2S] binding domain M1S46_07555 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S46_07560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S46_07560 PF01568 Molydopterin dinucleotide binding domain M1S46_07560 PF00384 Molybdopterin oxidoreductase M1S46_07560 PF04324 BFD-like [2Fe-2S] binding domain M1S46_07565 PF12804 MobA-like NTP transferase domain M1S46_07570 PF00384 Molybdopterin oxidoreductase M1S46_07570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S46_07570 PF01568 Molydopterin dinucleotide binding domain M1S46_07575 PF06463 Molybdenum Cofactor Synthesis C M1S46_07575 PF04055 Radical SAM superfamily M1S46_07585 PF02391 MoaE protein M1S46_07590 PF00994 Probable molybdopterin binding domain M1S46_07590 PF01967 MoaC family M1S46_07595 PF03453 MoeA N-terminal region (domain I and II) M1S46_07595 PF03454 MoeA C-terminal region (domain IV) M1S46_07595 PF00994 Probable molybdopterin binding domain M1S46_07600 PF01638 HxlR-like helix-turn-helix M1S46_07605 PF00155 Aminotransferase class I and II M1S46_07605 PF00392 Bacterial regulatory proteins, gntR family M1S46_07610 PF00892 EamA-like transporter family M1S46_07630 PF02635 DsrE/DsrF-like family M1S46_07635 PF16363 GDP-mannose 4,6 dehydratase M1S46_07640 PF00206 Lyase M1S46_07640 PF10415 Fumarase C C-terminus M1S46_07660 PF01266 FAD dependent oxidoreductase M1S46_07670 PF02542 YgbB family M1S46_07680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S46_07680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S46_07700 PF02954 Bacterial regulatory protein, Fis family M1S46_07700 PF00072 Response regulator receiver domain M1S46_07700 PF00158 Sigma-54 interaction domain M1S46_07705 PF00512 His Kinase A (phospho-acceptor) domain M1S46_07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_07705 PF00989 PAS fold M1S46_07710 PF00919 Uncharacterized protein family UPF0004 M1S46_07710 PF18693 TRAM domain M1S46_07710 PF04055 Radical SAM superfamily M1S46_07715 PF00696 Amino acid kinase family M1S46_07720 PF01765 Ribosome recycling factor M1S46_07725 PF01255 Putative undecaprenyl diphosphate synthase M1S46_07735 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S46_07735 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S46_07735 PF13288 DXP reductoisomerase C-terminal domain M1S46_07740 PF17820 PDZ domain M1S46_07740 PF13180 PDZ domain M1S46_07740 PF02163 Peptidase family M50 M1S46_07745 PF01103 Surface antigen M1S46_07745 PF07244 Surface antigen variable number repeat M1S46_07755 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_07755 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S46_07760 PF07977 FabA-like domain M1S46_07765 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S46_07765 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_07780 PF02631 RecX family M1S46_07785 PF00154 recA bacterial DNA recombination protein M1S46_07790 PF01479 S4 domain M1S46_07795 PF13419 Haloacid dehalogenase-like hydrolase M1S46_07820 PF01037 Lrp/AsnC ligand binding domain M1S46_07825 PF00266 Aminotransferase class-V M1S46_07830 PF00324 Amino acid permease M1S46_07845 PF00082 Subtilase family M1S46_07845 PF05922 Peptidase inhibitor I9 M1S46_07850 PF00916 Sulfate permease family M1S46_07850 PF01740 STAS domain M1S46_07870 PF07995 Glucose / Sorbosone dehydrogenase M1S46_07880 PF03707 Bacterial signalling protein N terminal repeat M1S46_07880 PF00563 EAL domain M1S46_07880 PF00990 Diguanylate cyclase, GGDEF domain M1S46_07900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S46_07900 PF02378 Phosphotransferase system, EIIC M1S46_07905 PF00294 pfkB family carbohydrate kinase M1S46_07910 PF05524 PEP-utilising enzyme, N-terminal M1S46_07910 PF00391 PEP-utilising enzyme, mobile domain M1S46_07910 PF02896 PEP-utilising enzyme, TIM barrel domain M1S46_07910 PF00381 PTS HPr component phosphorylation site M1S46_07910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S46_07935 PF05525 Branched-chain amino acid transport protein M1S46_07940 PF00557 Metallopeptidase family M24 M1S46_07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_07945 PF03466 LysR substrate binding domain M1S46_07955 PF00462 Glutaredoxin M1S46_07960 PF00202 Aminotransferase class-III M1S46_07965 PF00571 CBS domain M1S46_07965 PF00478 IMP dehydrogenase / GMP reductase domain M1S46_07990 PF02881 SRP54-type protein, helical bundle domain M1S46_07990 PF00448 SRP54-type protein, GTPase domain M1S46_08000 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S46_08015 PF08173 Membrane bound YbgT-like protein M1S46_08020 PF02322 Cytochrome bd terminal oxidase subunit II M1S46_08025 PF01654 Cytochrome bd terminal oxidase subunit I M1S46_08040 PF07290 Protein of unknown function (DUF1449) M1S46_08050 PF00294 pfkB family carbohydrate kinase M1S46_08055 PF00593 TonB dependent receptor M1S46_08055 PF07715 TonB-dependent Receptor Plug Domain M1S46_08060 PF05193 Peptidase M16 inactive domain M1S46_08060 PF00675 Insulinase (Peptidase family M16) M1S46_08060 PF08367 Peptidase M16C associated M1S46_08065 PF02253 Phospholipase A1 M1S46_08070 PF02386 Cation transport protein M1S46_08075 PF02080 TrkA-C domain M1S46_08075 PF02254 TrkA-N domain M1S46_08080 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S46_08080 PF00291 Pyridoxal-phosphate dependent enzyme M1S46_08085 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S46_08100 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S46_08100 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S46_08110 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S46_08115 PF17871 AAA lid domain M1S46_08115 PF07724 AAA domain (Cdc48 subfamily) M1S46_08115 PF00004 ATPase family associated with various cellular activities (AAA) M1S46_08115 PF02861 Clp amino terminal domain, pathogenicity island component M1S46_08115 PF10431 C-terminal, D2-small domain, of ClpB protein M1S46_08120 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S46_08125 PF00793 DAHP synthetase I family M1S46_08140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S46_08140 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_08170 PF00117 Glutamine amidotransferase class-I M1S46_08170 PF06418 CTP synthase N-terminus M1S46_08175 PF00793 DAHP synthetase I family M1S46_08180 PF03952 Enolase, N-terminal domain M1S46_08180 PF00113 Enolase, C-terminal TIM barrel domain M1S46_08185 PF04239 Protein of unknown function (DUF421) M1S46_08190 PF04977 Septum formation initiator M1S46_08195 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S46_08200 PF01144 Coenzyme A transferase M1S46_08205 PF01144 Coenzyme A transferase M1S46_08210 PF02803 Thiolase, C-terminal domain M1S46_08210 PF00108 Thiolase, N-terminal domain M1S46_08215 PF10397 Adenylosuccinate lyase C-terminus M1S46_08215 PF00206 Lyase M1S46_08220 PF00561 alpha/beta hydrolase fold M1S46_08225 PF07690 Major Facilitator Superfamily M1S46_08230 PF02627 Carboxymuconolactone decarboxylase family M1S46_08235 PF00775 Dioxygenase M1S46_08235 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S46_08240 PF00775 Dioxygenase M1S46_08245 PF01487 Type I 3-dehydroquinase M1S46_08250 PF05048 Periplasmic copper-binding protein (NosD) M1S46_08255 PF04966 Carbohydrate-selective porin, OprB family M1S46_08260 PF13360 PQQ-like domain M1S46_08260 PF01011 PQQ enzyme repeat M1S46_08270 PF04143 Sulphur transport M1S46_08280 PF00753 Metallo-beta-lactamase superfamily M1S46_08285 PF09339 IclR helix-turn-helix domain M1S46_08285 PF01614 Bacterial transcriptional regulator M1S46_08290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_08290 PF03466 LysR substrate binding domain M1S46_08295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_08295 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_08295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_08310 PF00106 short chain dehydrogenase M1S46_08320 PF07690 Major Facilitator Superfamily M1S46_08330 PF01425 Amidase M1S46_08335 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S46_08350 PF00355 Rieske [2Fe-2S] domain M1S46_08350 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S46_08365 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S46_08365 PF00175 Oxidoreductase NAD-binding domain M1S46_08370 PF01613 Flavin reductase like domain M1S46_08375 PF02311 AraC-like ligand binding domain M1S46_08375 PF12833 Helix-turn-helix domain M1S46_08380 PF07833 Copper amine oxidase N-terminal domain M1S46_08380 PF02727 Copper amine oxidase, N2 domain M1S46_08380 PF01179 Copper amine oxidase, enzyme domain M1S46_08380 PF02728 Copper amine oxidase, N3 domain M1S46_08390 PF00171 Aldehyde dehydrogenase family M1S46_08395 PF01804 Penicillin amidase M1S46_08400 PF12146 Serine aminopeptidase, S33 M1S46_08405 PF02803 Thiolase, C-terminal domain M1S46_08405 PF00108 Thiolase, N-terminal domain M1S46_08410 PF01144 Coenzyme A transferase M1S46_08415 PF01144 Coenzyme A transferase M1S46_08420 PF04444 Catechol dioxygenase N terminus M1S46_08420 PF00775 Dioxygenase M1S46_08425 PF02426 Muconolactone delta-isomerase M1S46_08430 PF13378 Enolase C-terminal domain-like M1S46_08430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S46_08435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_08435 PF03466 LysR substrate binding domain M1S46_08445 PF07729 FCD domain M1S46_08445 PF00392 Bacterial regulatory proteins, gntR family M1S46_08450 PF00920 Dehydratase family M1S46_08455 PF07690 Major Facilitator Superfamily M1S46_08465 PF00171 Aldehyde dehydrogenase family M1S46_08485 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_08485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_08485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_08495 PF06506 Propionate catabolism activator M1S46_08495 PF00158 Sigma-54 interaction domain M1S46_08495 PF02954 Bacterial regulatory protein, Fis family M1S46_08500 PF13193 AMP-binding enzyme C-terminal domain M1S46_08500 PF00501 AMP-binding enzyme M1S46_08505 PF04341 Protein of unknown function, DUF485 M1S46_08520 PF00474 Sodium:solute symporter family M1S46_08525 PF08240 Alcohol dehydrogenase GroES-like domain M1S46_08525 PF00107 Zinc-binding dehydrogenase M1S46_08530 PF00171 Aldehyde dehydrogenase family M1S46_08540 PF00561 alpha/beta hydrolase fold M1S46_08545 PF00199 Catalase M1S46_08545 PF06628 Catalase-related immune-responsive M1S46_08560 PF07859 alpha/beta hydrolase fold M1S46_08565 PF01047 MarR family M1S46_08570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S46_08570 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_08575 PF00106 short chain dehydrogenase M1S46_08580 PF01872 RibD C-terminal domain M1S46_08585 PF00376 MerR family regulatory protein M1S46_08585 PF09278 MerR, DNA binding M1S46_08595 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_08605 PF12706 Beta-lactamase superfamily domain M1S46_08610 PF08359 YsiA-like protein, C-terminal region M1S46_08610 PF00440 Bacterial regulatory proteins, tetR family M1S46_08620 PF00857 Isochorismatase family M1S46_08625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_08625 PF03466 LysR substrate binding domain M1S46_08630 PF07995 Glucose / Sorbosone dehydrogenase M1S46_08635 PF00999 Sodium/hydrogen exchanger family M1S46_08635 PF02254 TrkA-N domain M1S46_08645 PF01546 Peptidase family M20/M25/M40 M1S46_08645 PF07687 Peptidase dimerisation domain M1S46_08655 PF08479 POTRA domain, ShlB-type M1S46_08655 PF17287 POTRA domain M1S46_08655 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S46_08660 PF04829 Pre-toxin domain with VENN motif M1S46_08660 PF13332 Hemagglutinin repeat M1S46_08660 PF05860 haemagglutination activity domain M1S46_08660 PF13018 Extended Signal Peptide of Type V secretion system M1S46_08675 PF07690 Major Facilitator Superfamily M1S46_08680 PF04909 Amidohydrolase M1S46_08690 PF00392 Bacterial regulatory proteins, gntR family M1S46_08690 PF07702 UTRA domain M1S46_08695 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S46_08705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_08705 PF03466 LysR substrate binding domain M1S46_08725 PF07690 Major Facilitator Superfamily M1S46_08730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S46_08730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S46_08730 PF01842 ACT domain M1S46_08735 PF03737 Aldolase/RraA M1S46_08765 PF00529 HlyD membrane-fusion protein of T1SS M1S46_08765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S46_08780 PF00171 Aldehyde dehydrogenase family M1S46_08785 PF00920 Dehydratase family M1S46_08795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_08795 PF03466 LysR substrate binding domain M1S46_08800 PF01370 NAD dependent epimerase/dehydratase family M1S46_08805 PF07690 Major Facilitator Superfamily M1S46_08810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S46_08810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S46_08815 PF06719 AraC-type transcriptional regulator N-terminus M1S46_08815 PF12833 Helix-turn-helix domain M1S46_08830 PF00107 Zinc-binding dehydrogenase M1S46_08830 PF08240 Alcohol dehydrogenase GroES-like domain M1S46_08840 PF01032 FecCD transport family M1S46_08845 PF00005 ABC transporter M1S46_08865 PF14572 Phosphoribosyl synthetase-associated domain M1S46_08865 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S46_08870 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S46_08945 PF00196 Bacterial regulatory proteins, luxR family M1S46_08950 PF01425 Amidase M1S46_08955 PF13533 Biotin-lipoyl like M1S46_08960 PF07690 Major Facilitator Superfamily M1S46_08985 PF01975 Survival protein SurE M1S46_08995 PF13291 ACT domain M1S46_08995 PF04607 Region found in RelA / SpoT proteins M1S46_08995 PF02824 TGS domain M1S46_09045 PF12146 Serine aminopeptidase, S33 M1S46_09050 PF12833 Helix-turn-helix domain M1S46_09050 PF02311 AraC-like ligand binding domain M1S46_09060 PF00672 HAMP domain M1S46_09060 PF00512 His Kinase A (phospho-acceptor) domain M1S46_09060 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S46_09060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_09065 PF00072 Response regulator receiver domain M1S46_09065 PF00486 Transcriptional regulatory protein, C terminal M1S46_09075 PF00529 HlyD membrane-fusion protein of T1SS M1S46_09075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S46_09080 PF00873 AcrB/AcrD/AcrF family M1S46_09085 PF02321 Outer membrane efflux protein M1S46_09090 PF12146 Serine aminopeptidase, S33 M1S46_09095 PF00743 Flavin-binding monooxygenase-like M1S46_09100 PF01593 Flavin containing amine oxidoreductase M1S46_09115 PF01266 FAD dependent oxidoreductase M1S46_09135 PF16970 Type-1 fimbrial protein, A M1S46_09150 PF00665 Integrase core domain M1S46_09180 PF00582 Universal stress protein family M1S46_09185 PF00916 Sulfate permease family M1S46_09185 PF01740 STAS domain M1S46_09200 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S46_09200 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S46_09205 PF13953 PapC C-terminal domain M1S46_09205 PF13954 PapC N-terminal domain M1S46_09205 PF00577 Outer membrane usher protein M1S46_09210 PF00419 Fimbrial protein M1S46_09220 PF00107 Zinc-binding dehydrogenase M1S46_09220 PF08240 Alcohol dehydrogenase GroES-like domain M1S46_09230 PF00199 Catalase M1S46_09245 PF13091 PLD-like domain M1S46_09260 PF01244 Membrane dipeptidase (Peptidase family M19) M1S46_09265 PF13186 Iron-sulfur cluster-binding domain M1S46_09265 PF04055 Radical SAM superfamily M1S46_09270 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S46_09275 PF03070 TENA/THI-4/PQQC family M1S46_09280 PF12706 Beta-lactamase superfamily domain M1S46_09285 PF08042 PqqA family M1S46_09290 PF02503 Polyphosphate kinase middle domain M1S46_09290 PF13090 Polyphosphate kinase C-terminal domain 2 M1S46_09290 PF17941 Polyphosphate kinase C-terminal domain 1 M1S46_09290 PF13089 Polyphosphate kinase N-terminal domain M1S46_09295 PF00149 Calcineurin-like phosphoesterase M1S46_09305 PF00857 Isochorismatase family M1S46_09305 PF00550 Phosphopantetheine attachment site M1S46_09310 PF00106 short chain dehydrogenase M1S46_09315 PF00005 ABC transporter M1S46_09315 PF03459 TOBE domain M1S46_09320 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_09330 PF03459 TOBE domain M1S46_09330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_09335 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S46_09335 PF00355 Rieske [2Fe-2S] domain M1S46_09340 PF00866 Ring hydroxylating beta subunit M1S46_09345 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S46_09345 PF00175 Oxidoreductase NAD-binding domain M1S46_09345 PF00970 Oxidoreductase FAD-binding domain M1S46_09350 PF14525 AraC-binding-like domain M1S46_09350 PF12833 Helix-turn-helix domain M1S46_09360 PF01613 Flavin reductase like domain M1S46_09375 PF01738 Dienelactone hydrolase family M1S46_09380 PF07690 Major Facilitator Superfamily M1S46_09385 PF12833 Helix-turn-helix domain M1S46_09385 PF06719 AraC-type transcriptional regulator N-terminus M1S46_09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_09410 PF03466 LysR substrate binding domain M1S46_09415 PF01144 Coenzyme A transferase M1S46_09420 PF01144 Coenzyme A transferase M1S46_09425 PF02667 Short chain fatty acid transporter M1S46_09430 PF02803 Thiolase, C-terminal domain M1S46_09430 PF00108 Thiolase, N-terminal domain M1S46_09435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_09435 PF03466 LysR substrate binding domain M1S46_09440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_09440 PF03466 LysR substrate binding domain M1S46_09455 PF00206 Lyase M1S46_09455 PF10415 Fumarase C C-terminus M1S46_09475 PF00083 Sugar (and other) transporter M1S46_09490 PF00005 ABC transporter M1S46_09495 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_09500 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S46_09515 PF07702 UTRA domain M1S46_09515 PF00392 Bacterial regulatory proteins, gntR family M1S46_09525 PF02525 Flavodoxin-like fold M1S46_09530 PF01638 HxlR-like helix-turn-helix M1S46_09535 PF12833 Helix-turn-helix domain M1S46_09535 PF06445 GyrI-like small molecule binding domain M1S46_09550 PF01925 Sulfite exporter TauE/SafE M1S46_09565 PF00753 Metallo-beta-lactamase superfamily M1S46_09565 PF04273 Putative phosphatase (DUF442) M1S46_09575 PF01062 Bestrophin, RFP-TM, chloride channel M1S46_09580 PF08240 Alcohol dehydrogenase GroES-like domain M1S46_09580 PF00107 Zinc-binding dehydrogenase M1S46_09585 PF00106 short chain dehydrogenase M1S46_09590 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_09590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S46_09595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S46_09595 PF00364 Biotin-requiring enzyme M1S46_09595 PF02817 e3 binding domain M1S46_09600 PF02780 Transketolase, C-terminal domain M1S46_09600 PF02779 Transketolase, pyrimidine binding domain M1S46_09605 PF00676 Dehydrogenase E1 component M1S46_09610 PF04055 Radical SAM superfamily M1S46_09625 PF00990 Diguanylate cyclase, GGDEF domain M1S46_09625 PF08448 PAS fold M1S46_09630 PF01264 Chorismate synthase M1S46_09635 PF05175 Methyltransferase small domain M1S46_09640 PF00291 Pyridoxal-phosphate dependent enzyme M1S46_09650 PF00004 ATPase family associated with various cellular activities (AAA) M1S46_09650 PF17862 AAA+ lid domain M1S46_09650 PF01434 Peptidase family M41 M1S46_09660 PF05166 YcgL domain M1S46_09680 PF01612 3'-5' exonuclease M1S46_09680 PF00570 HRDC domain M1S46_09685 PF02132 RecR protein M1S46_09685 PF13662 Toprim domain M1S46_09690 PF02575 YbaB/EbfC DNA-binding family M1S46_09700 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S46_09705 PF00561 alpha/beta hydrolase fold M1S46_09710 PF08241 Methyltransferase domain M1S46_09740 PF01230 HIT domain M1S46_09775 PF00005 ABC transporter M1S46_09780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S46_09790 PF02684 Lipid-A-disaccharide synthetase M1S46_09795 PF00593 TonB dependent receptor M1S46_09795 PF07715 TonB-dependent Receptor Plug Domain M1S46_09815 PF01925 Sulfite exporter TauE/SafE M1S46_09820 PF00793 DAHP synthetase I family M1S46_09825 PF02654 Cobalamin-5-phosphate synthase M1S46_09840 PF02277 Phosphoribosyltransferase M1S46_09845 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S46_09855 PF13419 Haloacid dehalogenase-like hydrolase M1S46_09880 PF00593 TonB dependent receptor M1S46_09880 PF07715 TonB-dependent Receptor Plug Domain M1S46_09895 PF04183 IucA / IucC family M1S46_09895 PF06276 Ferric iron reductase FhuF-like transporter M1S46_09900 PF04183 IucA / IucC family M1S46_09900 PF06276 Ferric iron reductase FhuF-like transporter M1S46_09905 PF07690 Major Facilitator Superfamily M1S46_09910 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S46_09915 PF06276 Ferric iron reductase FhuF-like transporter M1S46_09915 PF04183 IucA / IucC family M1S46_09920 PF04073 Aminoacyl-tRNA editing domain M1S46_09930 PF03109 ABC1 family M1S46_09935 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_09935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_09935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_09940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_09940 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_09940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_09945 PF00487 Fatty acid desaturase M1S46_09950 PF12852 Cupin M1S46_09950 PF12833 Helix-turn-helix domain M1S46_09955 PF00639 PPIC-type PPIASE domain M1S46_09955 PF09312 SurA N-terminal domain M1S46_09960 PF00216 Bacterial DNA-binding protein M1S46_09975 PF02082 Transcriptional regulator M1S46_09980 PF00266 Aminotransferase class-V M1S46_09985 PF01592 NifU-like N terminal domain M1S46_09990 PF01521 Iron-sulphur cluster biosynthesis M1S46_09995 PF07743 HSCB C-terminal oligomerisation domain M1S46_09995 PF00226 DnaJ domain M1S46_10000 PF00012 Hsp70 protein M1S46_10005 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S46_10010 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S46_10020 PF02559 CarD-like/TRCF domain M1S46_10020 PF00270 DEAD/DEAH box helicase M1S46_10020 PF00271 Helicase conserved C-terminal domain M1S46_10020 PF03461 TRCF domain M1S46_10020 PF17757 UvrB interaction domain M1S46_10040 PF03737 Aldolase/RraA M1S46_10045 PF13460 NAD(P)H-binding M1S46_10050 PF01649 Ribosomal protein S20 M1S46_10060 PF00459 Inositol monophosphatase family M1S46_10075 PF00005 ABC transporter M1S46_10075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S46_10080 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_10085 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_10090 PF01432 Peptidase family M3 M1S46_10110 PF07715 TonB-dependent Receptor Plug Domain M1S46_10110 PF00593 TonB dependent receptor M1S46_10120 PF01618 MotA/TolQ/ExbB proton channel family M1S46_10125 PF02472 Biopolymer transport protein ExbD/TolR M1S46_10130 PF02472 Biopolymer transport protein ExbD/TolR M1S46_10140 PF01274 Malate synthase M1S46_10145 PF03969 AFG1-like ATPase M1S46_10175 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S46_10185 PF00216 Bacterial DNA-binding protein M1S46_10190 PF00575 S1 RNA binding domain M1S46_10195 PF02224 Cytidylate kinase M1S46_10205 PF14437 MafB19-like deaminase M1S46_10215 PF03167 Uracil DNA glycosylase superfamily M1S46_10225 PF03934 Type II secretion system (T2SS), protein K M1S46_10230 PF11612 Type II secretion system (T2SS), protein J M1S46_10230 PF07963 Prokaryotic N-terminal methylation motif M1S46_10235 PF02501 Type II secretion system (T2SS), protein I M1S46_10235 PF07963 Prokaryotic N-terminal methylation motif M1S46_10250 PF01026 TatD related DNase M1S46_10260 PF09115 DNA polymerase III, delta subunit, C terminal M1S46_10265 PF02348 Cytidylyltransferase M1S46_10270 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S46_10275 PF00664 ABC transporter transmembrane region M1S46_10275 PF00005 ABC transporter M1S46_10285 PF01618 MotA/TolQ/ExbB proton channel family M1S46_10290 PF02195 ParB-like nuclease domain M1S46_10290 PF17762 HTH domain found in ParB protein M1S46_10295 PF13614 AAA domain M1S46_10300 PF02527 rRNA small subunit methyltransferase G M1S46_10305 PF00483 Nucleotidyl transferase M1S46_10310 PF01636 Phosphotransferase enzyme family M1S46_10315 PF04453 LPS transport system D M1S46_10315 PF03968 OstA-like protein M1S46_10320 PF00639 PPIC-type PPIASE domain M1S46_10320 PF09312 SurA N-terminal domain M1S46_10325 PF01116 Fructose-bisphosphate aldolase class-II M1S46_10335 PF00162 Phosphoglycerate kinase M1S46_10345 PF02545 Maf-like protein M1S46_10350 PF08007 Cupin superfamily protein M1S46_10365 PF00375 Sodium:dicarboxylate symporter family M1S46_10370 PF06912 Protein of unknown function (DUF1275) M1S46_10375 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S46_10380 PF00664 ABC transporter transmembrane region M1S46_10380 PF00005 ABC transporter M1S46_10390 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S46_10390 PF12833 Helix-turn-helix domain M1S46_10395 PF01597 Glycine cleavage H-protein M1S46_10400 PF02146 Sir2 family M1S46_10405 PF00474 Sodium:solute symporter family M1S46_10410 PF01037 Lrp/AsnC ligand binding domain M1S46_10415 PF14850 DNA-binding domain of Proline dehydrogenase M1S46_10415 PF00171 Aldehyde dehydrogenase family M1S46_10415 PF01619 Proline dehydrogenase M1S46_10415 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S46_10420 PF04229 GrpB protein M1S46_10425 PF05958 tRNA (Uracil-5-)-methyltransferase M1S46_10435 PF09992 Phosphodiester glycosidase M1S46_10445 PF04264 YceI-like domain M1S46_10455 PF02780 Transketolase, C-terminal domain M1S46_10455 PF00456 Transketolase, thiamine diphosphate binding domain M1S46_10455 PF02779 Transketolase, pyrimidine binding domain M1S46_10460 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S46_10460 PF02772 S-adenosylmethionine synthetase, central domain M1S46_10460 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S46_10480 PF00905 Penicillin binding protein transpeptidase domain M1S46_10495 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S46_10500 PF03853 YjeF-related protein N-terminus M1S46_10500 PF01256 Carbohydrate kinase M1S46_10505 PF08331 Domain of unknown function (DUF1730) M1S46_10510 PF04055 Radical SAM superfamily M1S46_10510 PF06968 Biotin and Thiamin Synthesis associated domain M1S46_10525 PF16970 Type-1 fimbrial protein, A M1S46_10530 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S46_10530 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S46_10565 PF00892 EamA-like transporter family M1S46_10575 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S46_10585 PF03466 LysR substrate binding domain M1S46_10585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_10605 PF00440 Bacterial regulatory proteins, tetR family M1S46_10615 PF01709 Transcriptional regulator M1S46_10620 PF01037 Lrp/AsnC ligand binding domain M1S46_10635 PF00005 ABC transporter M1S46_10640 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_10645 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_10660 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S46_10660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_10670 PF00296 Luciferase-like monooxygenase M1S46_10675 PF03180 NLPA lipoprotein M1S46_10695 PF09383 NIL domain M1S46_10695 PF00005 ABC transporter M1S46_10700 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_10705 PF01926 50S ribosome-binding GTPase M1S46_10705 PF06071 Protein of unknown function (DUF933) M1S46_10730 PF03591 AzlC protein M1S46_10735 PF05437 Branched-chain amino acid transport protein (AzlD) M1S46_10745 PF02222 ATP-grasp domain M1S46_10750 PF08335 GlnD PII-uridylyltransferase M1S46_10750 PF01966 HD domain M1S46_10750 PF01909 Nucleotidyltransferase domain M1S46_10755 PF00155 Aminotransferase class I and II M1S46_10765 PF12852 Cupin M1S46_10765 PF12833 Helix-turn-helix domain M1S46_10770 PF00255 Glutathione peroxidase M1S46_10775 PF01641 SelR domain M1S46_10780 PF00155 Aminotransferase class I and II M1S46_10785 PF00375 Sodium:dicarboxylate symporter family M1S46_10790 PF17763 Glutaminase/Asparaginase C-terminal domain M1S46_10790 PF00710 Asparaginase, N-terminal M1S46_10795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S46_10795 PF14579 Helix-hairpin-helix motif M1S46_10795 PF02811 PHP domain M1S46_10795 PF01336 OB-fold nucleic acid binding domain M1S46_10795 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S46_10800 PF00588 SpoU rRNA Methylase family M1S46_10805 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_10820 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_10820 PF13192 Thioredoxin domain M1S46_10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_10835 PF03466 LysR substrate binding domain M1S46_10840 PF01758 Sodium Bile acid symporter family M1S46_10845 PF01022 Bacterial regulatory protein, arsR family M1S46_10850 PF03960 ArsC family M1S46_10860 PF13382 Adenine deaminase C-terminal domain M1S46_10860 PF01979 Amidohydrolase family M1S46_10870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_10870 PF03466 LysR substrate binding domain M1S46_10880 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S46_10885 PF01177 Asp/Glu/Hydantoin racemase M1S46_10890 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S46_10895 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_10900 PF00005 ABC transporter M1S46_10925 PF00083 Sugar (and other) transporter M1S46_10930 PF00296 Luciferase-like monooxygenase M1S46_10935 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S46_10935 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_10935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_10945 PF01654 Cytochrome bd terminal oxidase subunit I M1S46_10950 PF02322 Cytochrome bd terminal oxidase subunit II M1S46_10960 PF00155 Aminotransferase class I and II M1S46_10960 PF00392 Bacterial regulatory proteins, gntR family M1S46_10965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_10965 PF03466 LysR substrate binding domain M1S46_10980 PF00698 Acyl transferase domain M1S46_10985 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S46_10995 PF01039 Carboxyl transferase domain M1S46_11000 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S46_11005 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S46_11010 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S46_11015 PF07690 Major Facilitator Superfamily M1S46_11030 PF00392 Bacterial regulatory proteins, gntR family M1S46_11030 PF00155 Aminotransferase class I and II M1S46_11035 PF04172 LrgB-like family M1S46_11040 PF03788 LrgA family M1S46_11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_11045 PF03466 LysR substrate binding domain M1S46_11050 PF14834 Glutathione S-transferase, C-terminal domain M1S46_11050 PF02798 Glutathione S-transferase, N-terminal domain M1S46_11055 PF02798 Glutathione S-transferase, N-terminal domain M1S46_11060 PF03466 LysR substrate binding domain M1S46_11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_11070 PF00581 Rhodanese-like domain M1S46_11075 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_11085 PF00266 Aminotransferase class-V M1S46_11095 PF01810 LysE type translocator M1S46_11100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_11100 PF03466 LysR substrate binding domain M1S46_11110 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S46_11115 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S46_11120 PF00005 ABC transporter M1S46_11125 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_11130 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_11145 PF00072 Response regulator receiver domain M1S46_11150 PF09308 LuxQ, periplasmic M1S46_11150 PF00072 Response regulator receiver domain M1S46_11150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_11150 PF00512 His Kinase A (phospho-acceptor) domain M1S46_11160 PF01037 Lrp/AsnC ligand binding domain M1S46_11160 PF13404 AsnC-type helix-turn-helix domain M1S46_11170 PF00717 Peptidase S24-like M1S46_11195 PF00199 Catalase M1S46_11195 PF06628 Catalase-related immune-responsive M1S46_11195 PF18011 C-terminal domain found in long catalases M1S46_11205 PF02464 Competence-damaged protein M1S46_11205 PF18146 Damage-inducible protein CinA KH domain M1S46_11205 PF00994 Probable molybdopterin binding domain M1S46_11240 PF03466 LysR substrate binding domain M1S46_11240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_11260 PF00501 AMP-binding enzyme M1S46_11260 PF13193 AMP-binding enzyme C-terminal domain M1S46_11265 PF00440 Bacterial regulatory proteins, tetR family M1S46_11270 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_11270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_11270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_11275 PF01039 Carboxyl transferase domain M1S46_11280 PF00378 Enoyl-CoA hydratase/isomerase M1S46_11285 PF02785 Biotin carboxylase C-terminal domain M1S46_11285 PF00289 Biotin carboxylase, N-terminal domain M1S46_11285 PF00364 Biotin-requiring enzyme M1S46_11285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S46_11285 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S46_11290 PF00682 HMGL-like M1S46_11295 PF03466 LysR substrate binding domain M1S46_11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_11310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_11310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_11310 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S46_11310 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_11320 PF07690 Major Facilitator Superfamily M1S46_11330 PF01144 Coenzyme A transferase M1S46_11335 PF01144 Coenzyme A transferase M1S46_11340 PF07690 Major Facilitator Superfamily M1S46_11345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_11345 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_11345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_11350 PF00378 Enoyl-CoA hydratase/isomerase M1S46_11360 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S46_11360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S46_11360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S46_11365 PF02803 Thiolase, C-terminal domain M1S46_11365 PF00108 Thiolase, N-terminal domain M1S46_11370 PF09339 IclR helix-turn-helix domain M1S46_11375 PF07690 Major Facilitator Superfamily M1S46_11380 PF03060 Nitronate monooxygenase M1S46_11385 PF00378 Enoyl-CoA hydratase/isomerase M1S46_11390 PF09339 IclR helix-turn-helix domain M1S46_11395 PF02515 CoA-transferase family III M1S46_11400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_11400 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_11400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_11405 PF07690 Major Facilitator Superfamily M1S46_11410 PF13419 Haloacid dehalogenase-like hydrolase M1S46_11415 PF00266 Aminotransferase class-V M1S46_11420 PF01266 FAD dependent oxidoreductase M1S46_11425 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_11430 PF00005 ABC transporter M1S46_11430 PF08402 TOBE domain M1S46_11440 PF00392 Bacterial regulatory proteins, gntR family M1S46_11440 PF07702 UTRA domain M1S46_11445 PF01494 FAD binding domain M1S46_11450 PF01614 Bacterial transcriptional regulator M1S46_11450 PF09339 IclR helix-turn-helix domain M1S46_11455 PF02525 Flavodoxin-like fold M1S46_11460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_11460 PF03466 LysR substrate binding domain M1S46_11465 PF02627 Carboxymuconolactone decarboxylase family M1S46_11470 PF00171 Aldehyde dehydrogenase family M1S46_11480 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S46_11490 PF00171 Aldehyde dehydrogenase family M1S46_11495 PF00296 Luciferase-like monooxygenase M1S46_11500 PF01613 Flavin reductase like domain M1S46_11505 PF12697 Alpha/beta hydrolase family M1S46_11525 PF01292 Prokaryotic cytochrome b561 M1S46_11530 PF00199 Catalase M1S46_11565 PF03061 Thioesterase superfamily M1S46_11570 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_11575 PF07848 PaaX-like protein M1S46_11575 PF08223 PaaX-like protein C-terminal domain M1S46_11580 PF00501 AMP-binding enzyme M1S46_11580 PF14535 AMP-binding enzyme C-terminal domain M1S46_11585 PF02803 Thiolase, C-terminal domain M1S46_11585 PF00108 Thiolase, N-terminal domain M1S46_11590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S46_11590 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S46_11590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S46_11595 PF00378 Enoyl-CoA hydratase/isomerase M1S46_11600 PF00378 Enoyl-CoA hydratase/isomerase M1S46_11605 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S46_11605 PF00970 Oxidoreductase FAD-binding domain M1S46_11605 PF00175 Oxidoreductase NAD-binding domain M1S46_11610 PF01883 Iron-sulfur cluster assembly protein M1S46_11615 PF05138 Phenylacetic acid catabolic protein M1S46_11620 PF06243 Phenylacetic acid degradation B M1S46_11625 PF05138 Phenylacetic acid catabolic protein M1S46_11630 PF01575 MaoC like domain M1S46_11630 PF00171 Aldehyde dehydrogenase family M1S46_11635 PF03315 Serine dehydratase beta chain M1S46_11635 PF03313 Serine dehydratase alpha chain M1S46_11640 PF13520 Amino acid permease M1S46_11645 PF00171 Aldehyde dehydrogenase family M1S46_11650 PF00083 Sugar (and other) transporter M1S46_11660 PF04324 BFD-like [2Fe-2S] binding domain M1S46_11660 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_11670 PF01266 FAD dependent oxidoreductase M1S46_11675 PF05544 Proline racemase M1S46_11680 PF00392 Bacterial regulatory proteins, gntR family M1S46_11690 PF00701 Dihydrodipicolinate synthetase family M1S46_11700 PF09278 MerR, DNA binding M1S46_11700 PF00376 MerR family regulatory protein M1S46_11715 PF02677 Epoxyqueuosine reductase QueH M1S46_11730 PF07690 Major Facilitator Superfamily M1S46_11735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S46_11745 PF03466 LysR substrate binding domain M1S46_11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_11765 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S46_11770 PF06812 ImpA, N-terminal, type VI secretion system M1S46_11775 PF07724 AAA domain (Cdc48 subfamily) M1S46_11775 PF10431 C-terminal, D2-small domain, of ClpB protein M1S46_11775 PF00004 ATPase family associated with various cellular activities (AAA) M1S46_11775 PF17871 AAA lid domain M1S46_11790 PF00691 OmpA family M1S46_11790 PF01389 OmpA-like transmembrane domain M1S46_11800 PF06761 Intracellular multiplication and human macrophage-killing M1S46_11800 PF14331 ImcF-related N-terminal domain M1S46_11800 PF06744 Type VI secretion protein IcmF C-terminal M1S46_11815 PF05947 Type VI secretion system, TssF M1S46_11830 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S46_11855 PF00005 ABC transporter M1S46_11860 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S46_11865 PF01425 Amidase M1S46_11870 PF08753 NikR C terminal nickel binding domain M1S46_11870 PF01402 Ribbon-helix-helix protein, copG family M1S46_11890 PF02525 Flavodoxin-like fold M1S46_11895 PF02785 Biotin carboxylase C-terminal domain M1S46_11895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S46_11895 PF00289 Biotin carboxylase, N-terminal domain M1S46_11910 PF13823 Alcohol dehydrogenase GroES-associated M1S46_11910 PF08240 Alcohol dehydrogenase GroES-like domain M1S46_11910 PF00107 Zinc-binding dehydrogenase M1S46_11920 PF00440 Bacterial regulatory proteins, tetR family M1S46_11940 PF00654 Voltage gated chloride channel M1S46_11945 PF02785 Biotin carboxylase C-terminal domain M1S46_11945 PF00364 Biotin-requiring enzyme M1S46_11945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S46_11945 PF00289 Biotin carboxylase, N-terminal domain M1S46_11955 PF07286 Protein of unknown function (DUF1445) M1S46_11960 PF03746 LamB/YcsF family M1S46_11965 PF01566 Natural resistance-associated macrophage protein M1S46_11970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_11970 PF03466 LysR substrate binding domain M1S46_11985 PF05593 RHS Repeat M1S46_11985 PF03527 RHS protein M1S46_11990 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S46_11990 PF04717 Type VI secretion system, phage-baseplate injector M1S46_11990 PF13296 Putative type VI secretion system Rhs element Vgr M1S46_12000 PF13419 Haloacid dehalogenase-like hydrolase M1S46_12020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S46_12020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S46_12040 PF07690 Major Facilitator Superfamily M1S46_12055 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S46_12060 PF00990 Diguanylate cyclase, GGDEF domain M1S46_12060 PF00563 EAL domain M1S46_12060 PF03707 Bacterial signalling protein N terminal repeat M1S46_12065 PF00892 EamA-like transporter family M1S46_12070 PF01037 Lrp/AsnC ligand binding domain M1S46_12075 PF05188 MutS domain II M1S46_12075 PF01624 MutS domain I M1S46_12075 PF05192 MutS domain III M1S46_12075 PF00488 MutS domain V M1S46_12075 PF05190 MutS family domain IV M1S46_12085 PF00037 4Fe-4S binding domain M1S46_12085 PF11953 Domain of unknown function (DUF3470) M1S46_12095 PF01596 O-methyltransferase M1S46_12105 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_12110 PF01205 Uncharacterized protein family UPF0029 M1S46_12120 PF00005 ABC transporter M1S46_12120 PF00664 ABC transporter transmembrane region M1S46_12120 PF03412 Peptidase C39 family M1S46_12125 PF02321 Outer membrane efflux protein M1S46_12130 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S46_12130 PF00005 ABC transporter M1S46_12135 PF03968 OstA-like protein M1S46_12150 PF00571 CBS domain M1S46_12150 PF01380 SIS domain M1S46_12155 PF09190 DALR domain M1S46_12155 PF01406 tRNA synthetases class I (C) catalytic domain M1S46_12190 PF01638 HxlR-like helix-turn-helix M1S46_12195 PF07690 Major Facilitator Superfamily M1S46_12220 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S46_12220 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S46_12230 PF00313 'Cold-shock' DNA-binding domain M1S46_12235 PF01810 LysE type translocator M1S46_12265 PF02601 Exonuclease VII, large subunit M1S46_12265 PF13742 OB-fold nucleic acid binding domain M1S46_12300 PF09278 MerR, DNA binding M1S46_12300 PF00376 MerR family regulatory protein M1S46_12305 PF00403 Heavy-metal-associated domain M1S46_12310 PF00403 Heavy-metal-associated domain M1S46_12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_12315 PF03466 LysR substrate binding domain M1S46_12325 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S46_12325 PF00355 Rieske [2Fe-2S] domain M1S46_12330 PF00866 Ring hydroxylating beta subunit M1S46_12335 PF00175 Oxidoreductase NAD-binding domain M1S46_12335 PF00970 Oxidoreductase FAD-binding domain M1S46_12335 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S46_12340 PF00106 short chain dehydrogenase M1S46_12345 PF03594 Benzoate membrane transport protein M1S46_12350 PF07690 Major Facilitator Superfamily M1S46_12360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S46_12360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S46_12365 PF00270 DEAD/DEAH box helicase M1S46_12365 PF11898 Domain of unknown function (DUF3418) M1S46_12365 PF04408 Helicase associated domain (HA2) M1S46_12365 PF00271 Helicase conserved C-terminal domain M1S46_12365 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S46_12370 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S46_12370 PF00578 AhpC/TSA family M1S46_12390 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_12390 PF13192 Thioredoxin domain M1S46_12400 PF00043 Glutathione S-transferase, C-terminal domain M1S46_12400 PF02798 Glutathione S-transferase, N-terminal domain M1S46_12410 PF02390 Putative methyltransferase M1S46_12415 PF13417 Glutathione S-transferase, N-terminal domain M1S46_12415 PF00043 Glutathione S-transferase, C-terminal domain M1S46_12425 PF13488 Glycine zipper M1S46_12425 PF00691 OmpA family M1S46_12430 PF01979 Amidohydrolase family M1S46_12435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S46_12435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S46_12445 PF02926 THUMP domain M1S46_12445 PF01170 Putative RNA methylase family UPF0020 M1S46_12445 PF10672 S-adenosylmethionine-dependent methyltransferase M1S46_12460 PF00004 ATPase family associated with various cellular activities (AAA) M1S46_12460 PF07724 AAA domain (Cdc48 subfamily) M1S46_12460 PF17871 AAA lid domain M1S46_12460 PF02861 Clp amino terminal domain, pathogenicity island component M1S46_12460 PF10431 C-terminal, D2-small domain, of ClpB protein M1S46_12475 PF02566 OsmC-like protein M1S46_12485 PF00027 Cyclic nucleotide-binding domain M1S46_12485 PF13545 Crp-like helix-turn-helix domain M1S46_12495 PF00248 Aldo/keto reductase family M1S46_12510 PF00709 Adenylosuccinate synthetase M1S46_12515 PF13393 Histidyl-tRNA synthetase M1S46_12520 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S46_12520 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S46_12525 PF02272 DHHA1 domain M1S46_12525 PF01411 tRNA synthetases class II (A) M1S46_12525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S46_12530 PF00696 Amino acid kinase family M1S46_12530 PF01842 ACT domain M1S46_12530 PF13840 ACT domain M1S46_12535 PF02599 Global regulator protein family M1S46_12540 PF01351 Ribonuclease HII M1S46_12550 PF01292 Prokaryotic cytochrome b561 M1S46_12555 PF00962 Adenosine/AMP deaminase M1S46_12560 PF00860 Permease family M1S46_12570 PF00743 Flavin-binding monooxygenase-like M1S46_12575 PF00106 short chain dehydrogenase M1S46_12585 PF17954 Quercetinase C-terminal cupin domain M1S46_12585 PF02678 Pirin M1S46_12590 PF00440 Bacterial regulatory proteins, tetR family M1S46_12590 PF17932 Tetracyclin repressor-like, C-terminal domain M1S46_12600 PF00106 short chain dehydrogenase M1S46_12610 PF13610 DDE domain M1S46_12620 PF02796 Helix-turn-helix domain of resolvase M1S46_12620 PF00239 Resolvase, N terminal domain M1S46_12625 PF00563 EAL domain M1S46_12625 PF11809 Domain of unknown function (DUF3330) M1S46_12630 PF13610 DDE domain M1S46_12640 PF00239 Resolvase, N terminal domain M1S46_12640 PF02796 Helix-turn-helix domain of resolvase M1S46_12645 PF13610 DDE domain M1S46_12655 PF04958 Arginine N-succinyltransferase beta subunit M1S46_12660 PF00202 Aminotransferase class-III M1S46_12670 PF00171 Aldehyde dehydrogenase family M1S46_12680 PF07729 FCD domain M1S46_12680 PF00392 Bacterial regulatory proteins, gntR family M1S46_12690 PF00324 Amino acid permease M1S46_12695 PF01266 FAD dependent oxidoreductase M1S46_12700 PF00324 Amino acid permease M1S46_12740 PF03527 RHS protein M1S46_12740 PF05593 RHS Repeat M1S46_12745 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S46_12745 PF13296 Putative type VI secretion system Rhs element Vgr M1S46_12745 PF04717 Type VI secretion system, phage-baseplate injector M1S46_12765 PF03180 NLPA lipoprotein M1S46_12770 PF05987 Bacterial protein of unknown function (DUF898) M1S46_12785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S46_12785 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_12790 PF00764 Arginosuccinate synthase M1S46_12795 PF00563 EAL domain M1S46_12795 PF01590 GAF domain M1S46_12795 PF00990 Diguanylate cyclase, GGDEF domain M1S46_12795 PF00360 Phytochrome region M1S46_12800 PF01979 Amidohydrolase family M1S46_12805 PF00929 Exonuclease M1S46_12815 PF00593 TonB dependent receptor M1S46_12815 PF07715 TonB-dependent Receptor Plug Domain M1S46_12820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S46_12820 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_12825 PF00005 ABC transporter M1S46_12825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S46_12830 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S46_12830 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_12835 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_12840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S46_12845 PF01476 LysM domain M1S46_12845 PF01464 Transglycosylase SLT domain M1S46_12845 PF01464 Transglycosylase SLT domain M1S46_12845 PF01476 LysM domain M1S46_12850 PF00929 Exonuclease M1S46_12860 PF09297 NADH pyrophosphatase zinc ribbon domain M1S46_12860 PF00293 NUDIX domain M1S46_12870 PF04972 BON domain M1S46_12875 PF02021 Uncharacterised protein family UPF0102 M1S46_12880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S46_12890 PF03466 LysR substrate binding domain M1S46_12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_12895 PF01810 LysE type translocator M1S46_12905 PF13411 MerR HTH family regulatory protein M1S46_12915 PF01494 FAD binding domain M1S46_12920 PF01494 FAD binding domain M1S46_12925 PF05195 Aminopeptidase P, N-terminal domain M1S46_12925 PF00557 Metallopeptidase family M24 M1S46_13010 PF01551 Peptidase family M23 M1S46_13010 PF10145 Phage-related minor tail protein M1S46_13010 PF01464 Transglycosylase SLT domain M1S46_13070 PF04860 Phage portal protein M1S46_13170 PF03796 DnaB-like helicase C terminal domain M1S46_13170 PF00772 DnaB-like helicase N terminal domain M1S46_13185 PF00717 Peptidase S24-like M1S46_13185 PF01726 LexA DNA binding domain M1S46_13240 PF00884 Sulfatase M1S46_13240 PF08019 Phosphoethanolamine transferase EptA/EptB M1S46_13285 PF08525 Opacity-associated protein A N-terminal motif M1S46_13285 PF01476 LysM domain M1S46_13285 PF01551 Peptidase family M23 M1S46_13610 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S46_13615 PF00691 OmpA family M1S46_13615 PF04355 SmpA / OmlA family M1S46_13620 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S46_13620 PF13018 Extended Signal Peptide of Type V secretion system M1S46_13620 PF05658 Head domain of trimeric autotransporter adhesin M1S46_13620 PF03895 YadA-like membrane anchor domain M1S46_13625 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S46_13625 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S46_13625 PF00004 ATPase family associated with various cellular activities (AAA) M1S46_13630 PF02590 Predicted SPOUT methyltransferase M1S46_13635 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S46_13645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S46_13645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S46_13650 PF04060 Putative Fe-S cluster M1S46_13655 PF10576 Iron-sulfur binding domain of endonuclease III M1S46_13655 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S46_13655 PF00633 Helix-hairpin-helix motif M1S46_13665 PF05191 Adenylate kinase, active site lid M1S46_13680 PF03717 Penicillin-binding Protein dimerisation domain M1S46_13680 PF00905 Penicillin binding protein transpeptidase domain M1S46_13695 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S46_13700 PF01730 UreF M1S46_13705 PF02814 UreE urease accessory protein, N-terminal domain M1S46_13705 PF05194 UreE urease accessory protein, C-terminal domain M1S46_13710 PF01979 Amidohydrolase family M1S46_13710 PF00449 Urease alpha-subunit, N-terminal domain M1S46_13715 PF00699 Urease beta subunit M1S46_13720 PF00547 Urease, gamma subunit M1S46_13725 PF01774 UreD urease accessory protein M1S46_13740 PF00463 Isocitrate lyase family M1S46_13745 PF03466 LysR substrate binding domain M1S46_13745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_13750 PF00571 CBS domain M1S46_13750 PF03471 Transporter associated domain M1S46_13750 PF01595 Cyclin M transmembrane N-terminal domain M1S46_13755 PF03600 Citrate transporter M1S46_13770 PF00009 Elongation factor Tu GTP binding domain M1S46_13775 PF01507 Phosphoadenosine phosphosulfate reductase family M1S46_13785 PF14052 Capsule assembly protein Wzi M1S46_13790 PF01336 OB-fold nucleic acid binding domain M1S46_13790 PF00152 tRNA synthetases class II (D, K and N) M1S46_13805 PF00301 Rubredoxin M1S46_13810 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_13810 PF18113 Rubredoxin binding C-terminal domain M1S46_13815 PF00561 alpha/beta hydrolase fold M1S46_13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_13820 PF03466 LysR substrate binding domain M1S46_13830 PF17941 Polyphosphate kinase C-terminal domain 1 M1S46_13830 PF13090 Polyphosphate kinase C-terminal domain 2 M1S46_13830 PF13089 Polyphosphate kinase N-terminal domain M1S46_13830 PF02503 Polyphosphate kinase middle domain M1S46_13835 PF00912 Transglycosylase M1S46_13840 PF01694 Rhomboid family M1S46_13850 PF00005 ABC transporter M1S46_13855 PF13472 GDSL-like Lipase/Acylhydrolase family M1S46_13860 PF00484 Carbonic anhydrase M1S46_13865 PF00561 alpha/beta hydrolase fold M1S46_13875 PF00593 TonB dependent receptor M1S46_13875 PF07715 TonB-dependent Receptor Plug Domain M1S46_13880 PF01106 NifU-like domain M1S46_13880 PF01521 Iron-sulphur cluster biosynthesis M1S46_13890 PF00884 Sulfatase M1S46_13895 PF03781 Sulfatase-modifying factor enzyme 1 M1S46_13910 PF00291 Pyridoxal-phosphate dependent enzyme M1S46_13915 PF01384 Phosphate transporter family M1S46_13920 PF02310 B12 binding domain M1S46_13920 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S46_13920 PF02607 B12 binding domain M1S46_13920 PF02574 Homocysteine S-methyltransferase M1S46_13920 PF00809 Pterin binding enzyme M1S46_13925 PF02780 Transketolase, C-terminal domain M1S46_13925 PF02779 Transketolase, pyrimidine binding domain M1S46_13930 PF00456 Transketolase, thiamine diphosphate binding domain M1S46_13935 PF07690 Major Facilitator Superfamily M1S46_13945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_13945 PF03466 LysR substrate binding domain M1S46_13955 PF01263 Aldose 1-epimerase M1S46_13960 PF07690 Major Facilitator Superfamily M1S46_13965 PF12833 Helix-turn-helix domain M1S46_13965 PF02311 AraC-like ligand binding domain M1S46_13970 PF04960 Glutaminase M1S46_13975 PF01327 Polypeptide deformylase M1S46_13980 PF07690 Major Facilitator Superfamily M1S46_13990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S46_13990 PF00205 Thiamine pyrophosphate enzyme, central domain M1S46_13990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S46_13995 PF00171 Aldehyde dehydrogenase family M1S46_14000 PF01958 Domain of unknown function DUF108 M1S46_14000 PF03447 Homoserine dehydrogenase, NAD binding domain M1S46_14010 PF12697 Alpha/beta hydrolase family M1S46_14020 PF07690 Major Facilitator Superfamily M1S46_14025 PF14759 Reductase C-terminal M1S46_14025 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_14030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S46_14040 PF00355 Rieske [2Fe-2S] domain M1S46_14050 PF00355 Rieske [2Fe-2S] domain M1S46_14055 PF09339 IclR helix-turn-helix domain M1S46_14055 PF01614 Bacterial transcriptional regulator M1S46_14070 PF00378 Enoyl-CoA hydratase/isomerase M1S46_14080 PF00535 Glycosyl transferase family 2 M1S46_14085 PF14883 Hypothetical glycosyl hydrolase family 13 M1S46_14085 PF01522 Polysaccharide deacetylase M1S46_14090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S46_14095 PF07152 YaeQ protein M1S46_14100 PF00375 Sodium:dicarboxylate symporter family M1S46_14105 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S46_14105 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S46_14115 PF03061 Thioesterase superfamily M1S46_14125 PF02028 BCCT, betaine/carnitine/choline family transporter M1S46_14130 PF02028 BCCT, betaine/carnitine/choline family transporter M1S46_14135 PF00440 Bacterial regulatory proteins, tetR family M1S46_14135 PF13977 BetI-type transcriptional repressor, C-terminal M1S46_14140 PF00171 Aldehyde dehydrogenase family M1S46_14145 PF00732 GMC oxidoreductase M1S46_14145 PF05199 GMC oxidoreductase M1S46_14150 PF06039 Malate:quinone oxidoreductase (Mqo) M1S46_14160 PF02574 Homocysteine S-methyltransferase M1S46_14165 PF13520 Amino acid permease M1S46_14190 PF01126 Heme oxygenase M1S46_14200 PF04575 Protein of unknown function (DUF560) M1S46_14210 PF07715 TonB-dependent Receptor Plug Domain M1S46_14210 PF00593 TonB dependent receptor M1S46_14220 PF08281 Sigma-70, region 4 M1S46_14220 PF04542 Sigma-70 region 2 M1S46_14230 PF00701 Dihydrodipicolinate synthetase family M1S46_14235 PF00083 Sugar (and other) transporter M1S46_14255 PF01026 TatD related DNase M1S46_14270 PF07693 KAP family P-loop domain M1S46_14290 PF00436 Single-strand binding protein family M1S46_14345 PF13356 Arm DNA-binding domain M1S46_14345 PF00589 Phage integrase family M1S46_14385 PF10544 T5orf172 domain M1S46_14390 PF13614 AAA domain M1S46_14410 PF00905 Penicillin binding protein transpeptidase domain M1S46_14490 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S46_14490 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S46_14490 PF02767 DNA polymerase III beta subunit, central domain M1S46_14530 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S46_14680 PF07007 Lysozyme inhibitor LprI M1S46_14725 PF01695 IstB-like ATP binding protein M1S46_14735 PF00145 C-5 cytosine-specific DNA methylase M1S46_14780 PF01381 Helix-turn-helix M1S46_14780 PF00717 Peptidase S24-like M1S46_14815 PF00929 Exonuclease M1S46_14890 PF07690 Major Facilitator Superfamily M1S46_14895 PF13533 Biotin-lipoyl like M1S46_14900 PF03061 Thioesterase superfamily M1S46_14905 PF00490 Delta-aminolevulinic acid dehydratase M1S46_14910 PF01266 FAD dependent oxidoreductase M1S46_14915 PF08338 Domain of unknown function (DUF1731) M1S46_14915 PF01370 NAD dependent epimerase/dehydratase family M1S46_14935 PF12320 Type 5 capsule protein repressor C-terminal domain M1S46_14935 PF00149 Calcineurin-like phosphoesterase M1S46_14945 PF01168 Alanine racemase, N-terminal domain M1S46_14950 PF00437 Type II/IV secretion system protein M1S46_14955 PF00437 Type II/IV secretion system protein M1S46_14960 PF01475 Ferric uptake regulator family M1S46_14965 PF04355 SmpA / OmlA family M1S46_14970 PF03658 RnfH family Ubiquitin M1S46_14980 PF01814 Hemerythrin HHE cation binding domain M1S46_14985 PF13230 Glutamine amidotransferases class-II M1S46_14995 PF00696 Amino acid kinase family M1S46_15000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S46_15000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S46_15000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S46_15000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S46_15005 PF00692 dUTPase M1S46_15010 PF00580 UvrD/REP helicase N-terminal domain M1S46_15010 PF13361 UvrD-like helicase C-terminal domain M1S46_15015 PF00691 OmpA family M1S46_15015 PF13488 Glycine zipper M1S46_15020 PF01553 Acyltransferase M1S46_15030 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S46_15035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S46_15040 PF03776 Septum formation topological specificity factor MinE M1S46_15060 PF01810 LysE type translocator M1S46_15065 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S46_15065 PF17854 FtsK alpha domain M1S46_15065 PF01580 FtsK/SpoIIIE family M1S46_15065 PF09397 Ftsk gamma domain M1S46_15070 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S46_15075 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S46_15080 PF04376 Arginine-tRNA-protein transferase, N terminus M1S46_15080 PF04377 Arginine-tRNA-protein transferase, C terminus M1S46_15085 PF00583 Acetyltransferase (GNAT) family M1S46_15100 PF00009 Elongation factor Tu GTP binding domain M1S46_15100 PF03144 Elongation factor Tu domain 2 M1S46_15100 PF03143 Elongation factor Tu C-terminal domain M1S46_15105 PF00679 Elongation factor G C-terminus M1S46_15105 PF14492 Elongation Factor G, domain II M1S46_15105 PF03764 Elongation factor G, domain IV M1S46_15105 PF03144 Elongation factor Tu domain 2 M1S46_15105 PF00009 Elongation factor Tu GTP binding domain M1S46_15110 PF00177 Ribosomal protein S7p/S5e M1S46_15115 PF00164 Ribosomal protein S12/S23 M1S46_15125 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S46_15125 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S46_15130 PF03653 Uncharacterised protein family (UPF0093) M1S46_15135 PF02678 Pirin M1S46_15135 PF05726 Pirin C-terminal cupin domain M1S46_15145 PF02540 NAD synthase M1S46_15145 PF00795 Carbon-nitrogen hydrolase M1S46_15160 PF00970 Oxidoreductase FAD-binding domain M1S46_15160 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S46_15160 PF00175 Oxidoreductase NAD-binding domain M1S46_15165 PF00171 Aldehyde dehydrogenase family M1S46_15170 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S46_15170 PF00355 Rieske [2Fe-2S] domain M1S46_15175 PF07859 alpha/beta hydrolase fold M1S46_15180 PF02028 BCCT, betaine/carnitine/choline family transporter M1S46_15185 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S46_15190 PF03466 LysR substrate binding domain M1S46_15190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_15210 PF00037 4Fe-4S binding domain M1S46_15215 PF01467 Cytidylyltransferase-like M1S46_15220 PF01668 SmpB protein M1S46_15235 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S46_15240 PF00849 RNA pseudouridylate synthase M1S46_15240 PF01479 S4 domain M1S46_15245 PF13525 Outer membrane lipoprotein M1S46_15250 PF10410 DnaB-helicase binding domain of primase M1S46_15250 PF08278 DNA primase DnaG DnaB-binding M1S46_15250 PF08275 DNA primase catalytic core, N-terminal domain M1S46_15250 PF01807 CHC2 zinc finger M1S46_15255 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S46_15255 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S46_15255 PF01488 Shikimate / quinate 5-dehydrogenase M1S46_15265 PF03550 Outer membrane lipoprotein LolB M1S46_15270 PF08544 GHMP kinases C terminal M1S46_15270 PF00288 GHMP kinases N terminal domain M1S46_15295 PF14572 Phosphoribosyl synthetase-associated domain M1S46_15295 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S46_15300 PF01386 Ribosomal L25p family M1S46_15305 PF01195 Peptidyl-tRNA hydrolase M1S46_15310 PF02261 Aspartate decarboxylase M1S46_15325 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S46_15335 PF02581 Thiamine monophosphate synthase M1S46_15335 PF03070 TENA/THI-4/PQQC family M1S46_15335 PF08543 Phosphomethylpyrimidine kinase M1S46_15340 PF04972 BON domain M1S46_15340 PF01476 LysM domain M1S46_15345 PF00550 Phosphopantetheine attachment site M1S46_15355 PF00698 Acyl transferase domain M1S46_15360 PF01783 Ribosomal L32p protein family M1S46_15365 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S46_15370 PF04315 Elongation factor P hydroxylase M1S46_15375 PF01300 Telomere recombination M1S46_15380 PF02616 Segregation and condensation protein ScpA M1S46_15385 PF04079 Segregation and condensation complex subunit ScpB M1S46_15390 PF00849 RNA pseudouridylate synthase M1S46_15390 PF01479 S4 domain M1S46_15405 PF00155 Aminotransferase class I and II M1S46_15410 PF00202 Aminotransferase class-III M1S46_15410 PF06968 Biotin and Thiamin Synthesis associated domain M1S46_15410 PF04055 Radical SAM superfamily M1S46_15415 PF12697 Alpha/beta hydrolase family M1S46_15415 PF08241 Methyltransferase domain M1S46_15420 PF02358 Trehalose-phosphatase M1S46_15425 PF00982 Glycosyltransferase family 20 M1S46_15430 PF07690 Major Facilitator Superfamily M1S46_15435 PF00210 Ferritin-like domain M1S46_15440 PF12826 Helix-hairpin-helix motif M1S46_15440 PF00533 BRCA1 C Terminus (BRCT) domain M1S46_15440 PF01653 NAD-dependent DNA ligase adenylation domain M1S46_15440 PF03120 NAD-dependent DNA ligase OB-fold domain M1S46_15440 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S46_15450 PF06470 SMC proteins Flexible Hinge Domain M1S46_15450 PF02463 RecF/RecN/SMC N terminal domain M1S46_15460 PF01925 Sulfite exporter TauE/SafE M1S46_15470 PF03309 Type III pantothenate kinase M1S46_15475 PF00448 SRP54-type protein, GTPase domain M1S46_15475 PF02881 SRP54-type protein, helical bundle domain M1S46_15475 PF02978 Signal peptide binding domain M1S46_15485 PF01207 Dihydrouridine synthase (Dus) M1S46_15515 PF00692 dUTPase M1S46_15530 PF01048 Phosphorylase superfamily M1S46_15535 PF10609 NUBPL iron-transfer P-loop NTPase M1S46_15545 PF09334 tRNA synthetases class I (M) M1S46_15545 PF01588 Putative tRNA binding domain M1S46_15570 PF13533 Biotin-lipoyl like M1S46_15575 PF00291 Pyridoxal-phosphate dependent enzyme M1S46_15590 PF05552 Conserved TM helix M1S46_15605 PF00970 Oxidoreductase FAD-binding domain M1S46_15605 PF00175 Oxidoreductase NAD-binding domain M1S46_15610 PF03466 LysR substrate binding domain M1S46_15610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_15615 PF00313 'Cold-shock' DNA-binding domain M1S46_15625 PF00361 Proton-conducting membrane transporter M1S46_15630 PF00361 Proton-conducting membrane transporter M1S46_15635 PF00361 Proton-conducting membrane transporter M1S46_15635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S46_15640 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S46_15645 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S46_15650 PF12838 4Fe-4S dicluster domain M1S46_15655 PF00146 NADH dehydrogenase M1S46_15660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S46_15660 PF00384 Molybdopterin oxidoreductase M1S46_15660 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S46_15665 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S46_15665 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S46_15665 PF10531 SLBB domain M1S46_15675 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S46_15675 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S46_15680 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S46_15685 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S46_15690 PF00990 Diguanylate cyclase, GGDEF domain M1S46_15690 PF17151 Periplasmic sensor domain M1S46_15700 PF00512 His Kinase A (phospho-acceptor) domain M1S46_15700 PF00672 HAMP domain M1S46_15700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_15705 PF00486 Transcriptional regulatory protein, C terminal M1S46_15705 PF00072 Response regulator receiver domain M1S46_15715 PF02867 Ribonucleotide reductase, barrel domain M1S46_15715 PF03477 ATP cone domain M1S46_15715 PF00317 Ribonucleotide reductase, all-alpha domain M1S46_15725 PF00268 Ribonucleotide reductase, small chain M1S46_15735 PF00672 HAMP domain M1S46_15735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_15735 PF00512 His Kinase A (phospho-acceptor) domain M1S46_15735 PF13755 Sensor N-terminal transmembrane domain M1S46_15735 PF13756 Stimulus-sensing domain M1S46_15805 PF13360 PQQ-like domain M1S46_15805 PF01011 PQQ enzyme repeat M1S46_15830 PF02567 Phenazine biosynthesis-like protein M1S46_15855 PF01613 Flavin reductase like domain M1S46_15860 PF01717 Cobalamin-independent synthase, Catalytic domain M1S46_15860 PF08267 Cobalamin-independent synthase, N-terminal domain M1S46_15870 PF03466 LysR substrate binding domain M1S46_15870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_15875 PF01810 LysE type translocator M1S46_15885 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S46_15885 PF12833 Helix-turn-helix domain M1S46_15890 PF01546 Peptidase family M20/M25/M40 M1S46_15890 PF07687 Peptidase dimerisation domain M1S46_15900 PF03466 LysR substrate binding domain M1S46_15900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_15905 PF07690 Major Facilitator Superfamily M1S46_15915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_15915 PF03466 LysR substrate binding domain M1S46_15920 PF14537 Cytochrome c3 M1S46_15920 PF00890 FAD binding domain M1S46_15930 PF02515 CoA-transferase family III M1S46_15935 PF07690 Major Facilitator Superfamily M1S46_15940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_15940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_15940 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_15945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_15945 PF03466 LysR substrate binding domain M1S46_15950 PF08240 Alcohol dehydrogenase GroES-like domain M1S46_15950 PF00107 Zinc-binding dehydrogenase M1S46_15955 PF00962 Adenosine/AMP deaminase M1S46_15965 PF12167 Arm DNA-binding domain M1S46_15965 PF00589 Phage integrase family M1S46_15975 PF00436 Single-strand binding protein family M1S46_15995 PF00005 ABC transporter M1S46_16195 PF07927 HicA toxin of bacterial toxin-antitoxin, M1S46_16200 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system M1S46_16200 PF01381 Helix-turn-helix M1S46_16230 PF02445 Quinolinate synthetase A protein M1S46_16235 PF01960 ArgJ family M1S46_16240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S46_16240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S46_16245 PF00893 Small Multidrug Resistance protein M1S46_16255 PF05275 Copper resistance protein B precursor (CopB) M1S46_16260 PF00394 Multicopper oxidase M1S46_16260 PF07731 Multicopper oxidase M1S46_16260 PF07732 Multicopper oxidase M1S46_16275 PF00834 Ribulose-phosphate 3 epimerase family M1S46_16285 PF00756 Putative esterase M1S46_16295 PF04445 Putative SAM-dependent methyltransferase M1S46_16300 PF00814 Glycoprotease family M1S46_16305 PF00132 Bacterial transferase hexapeptide (six repeats) M1S46_16310 PF00293 NUDIX domain M1S46_16350 PF00425 chorismate binding enzyme M1S46_16350 PF04715 Anthranilate synthase component I, N terminal region M1S46_16355 PF00155 Aminotransferase class I and II M1S46_16360 PF00815 Histidinol dehydrogenase M1S46_16365 PF01634 ATP phosphoribosyltransferase M1S46_16370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S46_16375 PF01722 BolA-like protein M1S46_16380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S46_16385 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S46_16385 PF04963 Sigma-54 factor, core binding domain M1S46_16385 PF04552 Sigma-54, DNA binding domain M1S46_16430 PF00795 Carbon-nitrogen hydrolase M1S46_16440 PF01047 MarR family M1S46_16445 PF02566 OsmC-like protein M1S46_16450 PF00437 Type II/IV secretion system protein M1S46_16470 PF01612 3'-5' exonuclease M1S46_16470 PF00476 DNA polymerase family A M1S46_16470 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S46_16470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S46_16475 PF02325 YGGT family M1S46_16480 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S46_16480 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S46_16485 PF01171 PP-loop family M1S46_16485 PF09179 TilS substrate binding domain M1S46_16485 PF11734 TilS substrate C-terminal domain M1S46_16490 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S46_16495 PF02541 Ppx/GppA phosphatase family M1S46_16500 PF00085 Thioredoxin M1S46_16505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S46_16505 PF07497 Rho termination factor, RNA-binding domain M1S46_16505 PF07498 Rho termination factor, N-terminal domain M1S46_16520 PF00216 Bacterial DNA-binding protein M1S46_16525 PF01588 Putative tRNA binding domain M1S46_16525 PF03147 Ferredoxin-fold anticodon binding domain M1S46_16525 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S46_16525 PF03484 tRNA synthetase B5 domain M1S46_16525 PF03483 B3/4 domain M1S46_16530 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S46_16530 PF01409 tRNA synthetases class II core domain (F) M1S46_16550 PF00453 Ribosomal protein L20 M1S46_16555 PF01632 Ribosomal protein L35 M1S46_16565 PF07690 Major Facilitator Superfamily M1S46_16570 PF09335 SNARE associated Golgi protein M1S46_16575 PF02798 Glutathione S-transferase, N-terminal domain M1S46_16575 PF00043 Glutathione S-transferase, C-terminal domain M1S46_16580 PF05198 Translation initiation factor IF-3, N-terminal domain M1S46_16580 PF00707 Translation initiation factor IF-3, C-terminal domain M1S46_16585 PF02824 TGS domain M1S46_16585 PF03129 Anticodon binding domain M1S46_16585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S46_16585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S46_16590 PF13193 AMP-binding enzyme C-terminal domain M1S46_16590 PF00501 AMP-binding enzyme M1S46_16595 PF04751 Protein of unknown function (DUF615) M1S46_16600 PF00381 PTS HPr component phosphorylation site M1S46_16605 PF03668 P-loop ATPase protein family M1S46_16610 PF02569 Pantoate-beta-alanine ligase M1S46_16615 PF02548 Ketopantoate hydroxymethyltransferase M1S46_16620 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S46_16625 PF01743 Poly A polymerase head domain M1S46_16625 PF12626 Polymerase A arginine-rich C-terminus M1S46_16625 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S46_16635 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S46_16645 PF04607 Region found in RelA / SpoT proteins M1S46_16645 PF02824 TGS domain M1S46_16645 PF13291 ACT domain M1S46_16650 PF05958 tRNA (Uracil-5-)-methyltransferase M1S46_16660 PF00291 Pyridoxal-phosphate dependent enzyme M1S46_16665 PF00672 HAMP domain M1S46_16665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_16665 PF00512 His Kinase A (phospho-acceptor) domain M1S46_16665 PF01627 Hpt domain M1S46_16665 PF00072 Response regulator receiver domain M1S46_16665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S46_16670 PF00378 Enoyl-CoA hydratase/isomerase M1S46_16675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S46_16675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S46_16680 PF01261 Xylose isomerase-like TIM barrel M1S46_16690 PF00106 short chain dehydrogenase M1S46_16695 PF02233 NAD(P) transhydrogenase beta subunit M1S46_16700 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S46_16705 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S46_16705 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S46_16710 PF00892 EamA-like transporter family M1S46_16720 PF07690 Major Facilitator Superfamily M1S46_16725 PF01207 Dihydrouridine synthase (Dus) M1S46_16735 PF03466 LysR substrate binding domain M1S46_16735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_16745 PF00899 ThiF family M1S46_16755 PF00694 Aconitase C-terminal domain M1S46_16755 PF00330 Aconitase family (aconitate hydratase) M1S46_16760 PF01026 TatD related DNase M1S46_16775 PF00009 Elongation factor Tu GTP binding domain M1S46_16775 PF03144 Elongation factor Tu domain 2 M1S46_16775 PF16658 Class II release factor RF3, C-terminal domain M1S46_16795 PF00563 EAL domain M1S46_16795 PF03707 Bacterial signalling protein N terminal repeat M1S46_16795 PF00990 Diguanylate cyclase, GGDEF domain M1S46_16800 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S46_16800 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S46_16805 PF10369 Small subunit of acetolactate synthase M1S46_16810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S46_16810 PF00205 Thiamine pyrophosphate enzyme, central domain M1S46_16810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S46_16820 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S46_16820 PF09334 tRNA synthetases class I (M) M1S46_16820 PF08264 Anticodon-binding domain of tRNA M1S46_16820 PF00133 tRNA synthetases class I (I, L, M and V) M1S46_16835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S46_16840 PF00005 ABC transporter M1S46_16840 PF02687 FtsX-like permease family M1S46_16840 PF12704 MacB-like periplasmic core domain M1S46_16845 PF02321 Outer membrane efflux protein M1S46_16860 PF00929 Exonuclease M1S46_16865 PF03193 RsgA GTPase M1S46_16875 PF00462 Glutaredoxin M1S46_16880 PF02556 Preprotein translocase subunit SecB M1S46_16895 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S46_16895 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S46_16910 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S46_16910 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S46_16920 PF04820 Tryptophan halogenase M1S46_16940 PF00221 Aromatic amino acid lyase M1S46_16955 PF13193 AMP-binding enzyme C-terminal domain M1S46_16955 PF00501 AMP-binding enzyme M1S46_16965 PF00550 Phosphopantetheine attachment site M1S46_16970 PF00550 Phosphopantetheine attachment site M1S46_16985 PF01926 50S ribosome-binding GTPase M1S46_16985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S46_16990 PF13360 PQQ-like domain M1S46_17000 PF13393 Histidyl-tRNA synthetase M1S46_17000 PF03129 Anticodon binding domain M1S46_17005 PF04551 GcpE protein M1S46_17010 PF13464 Domain of unknown function (DUF4115) M1S46_17020 PF04055 Radical SAM superfamily M1S46_17025 PF00334 Nucleoside diphosphate kinase M1S46_17030 PF04384 Iron-sulphur cluster assembly M1S46_17035 PF01569 PAP2 superfamily M1S46_17040 PF13439 Glycosyltransferase Family 4 M1S46_17040 PF00534 Glycosyl transferases group 1 M1S46_17045 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S46_17045 PF00595 PDZ domain M1S46_17045 PF03572 Peptidase family S41 M1S46_17045 PF17804 Tail specific protease N-terminal domain M1S46_17050 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S46_17060 PF00561 alpha/beta hydrolase fold M1S46_17065 PF00171 Aldehyde dehydrogenase family M1S46_17070 PF00171 Aldehyde dehydrogenase family M1S46_17075 PF01202 Shikimate kinase M1S46_17080 PF02447 GntP family permease M1S46_17085 PF01081 KDPG and KHG aldolase M1S46_17090 PF00920 Dehydratase family M1S46_17095 PF00871 Acetokinase family M1S46_17100 PF07085 DRTGG domain M1S46_17100 PF01515 Phosphate acetyl/butaryl transferase M1S46_17105 PF05681 Fumarate hydratase (Fumerase) M1S46_17105 PF05683 Fumarase C-terminus M1S46_17120 PF10431 C-terminal, D2-small domain, of ClpB protein M1S46_17120 PF06689 ClpX C4-type zinc finger M1S46_17120 PF07724 AAA domain (Cdc48 subfamily) M1S46_17125 PF00574 Clp protease M1S46_17130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S46_17130 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S46_17130 PF05697 Bacterial trigger factor protein (TF) M1S46_17135 PF07715 TonB-dependent Receptor Plug Domain M1S46_17135 PF00593 TonB dependent receptor M1S46_17140 PF13640 2OG-Fe(II) oxygenase superfamily M1S46_17140 PF18331 PKHD-type hydroxylase C-terminal domain M1S46_17145 PF00682 HMGL-like M1S46_17145 PF08502 LeuA allosteric (dimerisation) domain M1S46_17150 PF00561 alpha/beta hydrolase fold M1S46_17155 PF07021 Methionine biosynthesis protein MetW M1S46_17155 PF00561 alpha/beta hydrolase fold M1S46_17165 PF01725 Ham1 family M1S46_17175 PF02416 mttA/Hcf106 family M1S46_17180 PF02416 mttA/Hcf106 family M1S46_17185 PF00902 Sec-independent protein translocase protein (TatC) M1S46_17205 PF01790 Prolipoprotein diacylglyceryl transferase M1S46_17220 PF00303 Thymidylate synthase M1S46_17225 PF00186 Dihydrofolate reductase M1S46_17235 PF01625 Peptide methionine sulfoxide reductase M1S46_17245 PF01618 MotA/TolQ/ExbB proton channel family M1S46_17255 PF01842 ACT domain M1S46_17255 PF00551 Formyl transferase M1S46_17265 PF00171 Aldehyde dehydrogenase family M1S46_17270 PF00830 Ribosomal L28 family M1S46_17275 PF00471 Ribosomal protein L33 M1S46_17280 PF02254 TrkA-N domain M1S46_17280 PF00999 Sodium/hydrogen exchanger family M1S46_17300 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S46_17305 PF13361 UvrD-like helicase C-terminal domain M1S46_17305 PF00580 UvrD/REP helicase N-terminal domain M1S46_17320 PF08272 Topoisomerase I zinc-ribbon-like M1S46_17320 PF01131 DNA topoisomerase M1S46_17320 PF01751 Toprim domain M1S46_17320 PF01396 Topoisomerase DNA binding C4 zinc finger M1S46_17330 PF01638 HxlR-like helix-turn-helix M1S46_17335 PF08240 Alcohol dehydrogenase GroES-like domain M1S46_17335 PF00107 Zinc-binding dehydrogenase M1S46_17340 PF04102 SlyX M1S46_17345 PF12848 ABC transporter M1S46_17345 PF16326 ABC transporter C-terminal domain M1S46_17345 PF00005 ABC transporter M1S46_17350 PF01810 LysE type translocator M1S46_17355 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S46_17365 PF00375 Sodium:dicarboxylate symporter family M1S46_17375 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S46_17375 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S46_17395 PF01416 tRNA pseudouridine synthase M1S46_17405 PF01176 Translation initiation factor 1A / IF-1 M1S46_17420 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S46_17430 PF00694 Aconitase C-terminal domain M1S46_17435 PF00330 Aconitase family (aconitate hydratase) M1S46_17445 PF03466 LysR substrate binding domain M1S46_17445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_17465 PF00293 NUDIX domain M1S46_17470 PF05524 PEP-utilising enzyme, N-terminal M1S46_17470 PF01590 GAF domain M1S46_17470 PF00391 PEP-utilising enzyme, mobile domain M1S46_17470 PF02896 PEP-utilising enzyme, TIM barrel domain M1S46_17475 PF00141 Peroxidase M1S46_17480 PF12706 Beta-lactamase superfamily domain M1S46_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_17485 PF03466 LysR substrate binding domain M1S46_17495 PF02798 Glutathione S-transferase, N-terminal domain M1S46_17500 PF08279 HTH domain M1S46_17500 PF13280 WYL domain M1S46_17505 PF13419 Haloacid dehalogenase-like hydrolase M1S46_17510 PF01479 S4 domain M1S46_17510 PF00849 RNA pseudouridylate synthase M1S46_17515 PF12111 Polyribonucleotide phosphorylase C terminal M1S46_17515 PF10150 Ribonuclease E/G family M1S46_17515 PF00575 S1 RNA binding domain M1S46_17520 PF00501 AMP-binding enzyme M1S46_17520 PF13193 AMP-binding enzyme C-terminal domain M1S46_17535 PF03466 LysR substrate binding domain M1S46_17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_17540 PF00106 short chain dehydrogenase M1S46_17545 PF06969 HemN C-terminal domain M1S46_17545 PF04055 Radical SAM superfamily M1S46_17555 PF01554 MatE M1S46_17560 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_17560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_17560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S46_17565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_17565 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S46_17570 PF03109 ABC1 family M1S46_17575 PF01197 Ribosomal protein L31 M1S46_17590 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S46_17610 PF03884 DNA gyrase inhibitor YacG M1S46_17615 PF00753 Metallo-beta-lactamase superfamily M1S46_17620 PF00762 Ferrochelatase M1S46_17630 PF01177 Asp/Glu/Hydantoin racemase M1S46_17645 PF01206 Sulfurtransferase TusA M1S46_17650 PF00571 CBS domain M1S46_17650 PF03471 Transporter associated domain M1S46_17655 PF00795 Carbon-nitrogen hydrolase M1S46_17660 PF01588 Putative tRNA binding domain M1S46_17670 PF07963 Prokaryotic N-terminal methylation motif M1S46_17670 PF08334 Type II secretion system (T2SS), protein G M1S46_17675 PF00482 Type II secretion system (T2SS), protein F M1S46_17680 PF00270 DEAD/DEAH box helicase M1S46_17680 PF00271 Helicase conserved C-terminal domain M1S46_17680 PF17764 3′ DNA-binding domain (3′BD) M1S46_17680 PF18074 Primosomal protein N C-terminal domain M1S46_17680 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S46_17685 PF00999 Sodium/hydrogen exchanger family M1S46_17685 PF02254 TrkA-N domain M1S46_17690 PF01430 Hsp33 protein M1S46_17700 PF00226 DnaJ domain M1S46_17700 PF01556 DnaJ C terminal domain M1S46_17710 PF01544 CorA-like Mg2+ transporter protein M1S46_17715 PF00013 KH domain M1S46_17715 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S46_17715 PF01138 3' exoribonuclease family, domain 1 M1S46_17715 PF03725 3' exoribonuclease family, domain 2 M1S46_17715 PF00575 S1 RNA binding domain M1S46_17720 PF00312 Ribosomal protein S15 M1S46_17725 PF00144 Beta-lactamase M1S46_17730 PF13538 UvrD-like helicase C-terminal domain M1S46_17735 PF13361 UvrD-like helicase C-terminal domain M1S46_17735 PF12705 PD-(D/E)XK nuclease superfamily M1S46_17735 PF00580 UvrD/REP helicase N-terminal domain M1S46_17740 PF17946 RecC C-terminal domain M1S46_17750 PF03976 Polyphosphate kinase 2 (PPK2) M1S46_17760 PF01209 ubiE/COQ5 methyltransferase family M1S46_17770 PF03109 ABC1 family M1S46_17775 PF01494 FAD binding domain M1S46_17780 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S46_17795 PF13244 Domain of unknown function (DUF4040) M1S46_17795 PF00361 Proton-conducting membrane transporter M1S46_17795 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S46_17795 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S46_17800 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S46_17805 PF00361 Proton-conducting membrane transporter M1S46_17810 PF01899 Na+/H+ ion antiporter subunit M1S46_17815 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S46_17820 PF03334 Na+/H+ antiporter subunit M1S46_17825 PF02033 Ribosome-binding factor A M1S46_17830 PF00009 Elongation factor Tu GTP binding domain M1S46_17830 PF11987 Translation-initiation factor 2 M1S46_17830 PF08364 Bacterial translation initiation factor IF-2 associated region M1S46_17830 PF04760 Translation initiation factor IF-2, N-terminal region M1S46_17835 PF13184 NusA-like KH domain M1S46_17835 PF08529 NusA N-terminal domain M1S46_17835 PF00575 S1 RNA binding domain M1S46_17840 PF02576 RimP N-terminal domain M1S46_17840 PF17384 RimP C-terminal SH3 domain M1S46_17860 PF03840 Preprotein translocase SecG subunit M1S46_17865 PF00121 Triosephosphate isomerase M1S46_17870 PF00437 Type II/IV secretion system protein M1S46_17870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S46_17875 PF00482 Type II secretion system (T2SS), protein F M1S46_17885 PF06750 Bacterial Peptidase A24 N-terminal domain M1S46_17885 PF01478 Type IV leader peptidase family M1S46_17890 PF01121 Dephospho-CoA kinase M1S46_17900 PF00588 SpoU rRNA Methylase family M1S46_17900 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S46_17905 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S46_17915 PF02463 RecF/RecN/SMC N terminal domain M1S46_17920 PF02622 Uncharacterized ACR, COG1678 M1S46_17925 PF03652 Holliday junction resolvase M1S46_17930 PF13533 Biotin-lipoyl like M1S46_17955 PF02805 Metal binding domain of Ada M1S46_17955 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S46_17955 PF12833 Helix-turn-helix domain M1S46_17955 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S46_17960 PF01066 CDP-alcohol phosphatidyltransferase M1S46_17970 PF08459 UvrC Helix-hairpin-helix N-terminal M1S46_17970 PF02151 UvrB/uvrC motif M1S46_17970 PF01541 GIY-YIG catalytic domain M1S46_17990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S46_17990 PF00378 Enoyl-CoA hydratase/isomerase M1S46_17990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S46_17995 PF02803 Thiolase, C-terminal domain M1S46_17995 PF00108 Thiolase, N-terminal domain M1S46_18015 PF09278 MerR, DNA binding M1S46_18015 PF00376 MerR family regulatory protein M1S46_18025 PF01323 DSBA-like thioredoxin domain M1S46_18040 PF00183 Hsp90 protein M1S46_18040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_18055 PF03553 Na+/H+ antiporter family M1S46_18055 PF13726 Na+-H+ antiporter family M1S46_18060 PF00561 alpha/beta hydrolase fold M1S46_18080 PF04997 RNA polymerase Rpb1, domain 1 M1S46_18080 PF04983 RNA polymerase Rpb1, domain 3 M1S46_18080 PF05000 RNA polymerase Rpb1, domain 4 M1S46_18080 PF04998 RNA polymerase Rpb1, domain 5 M1S46_18080 PF00623 RNA polymerase Rpb1, domain 2 M1S46_18085 PF10385 RNA polymerase beta subunit external 1 domain M1S46_18085 PF04563 RNA polymerase beta subunit M1S46_18085 PF04561 RNA polymerase Rpb2, domain 2 M1S46_18085 PF04560 RNA polymerase Rpb2, domain 7 M1S46_18085 PF00562 RNA polymerase Rpb2, domain 6 M1S46_18085 PF04565 RNA polymerase Rpb2, domain 3 M1S46_18090 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S46_18090 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S46_18095 PF00466 Ribosomal protein L10 M1S46_18100 PF00687 Ribosomal protein L1p/L10e family M1S46_18105 PF03946 Ribosomal protein L11, N-terminal domain M1S46_18105 PF00298 Ribosomal protein L11, RNA binding domain M1S46_18110 PF00467 KOW motif M1S46_18110 PF02357 Transcription termination factor nusG M1S46_18115 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S46_18125 PF00009 Elongation factor Tu GTP binding domain M1S46_18125 PF03143 Elongation factor Tu C-terminal domain M1S46_18125 PF03144 Elongation factor Tu domain 2 M1S46_18150 PF04715 Anthranilate synthase component I, N terminal region M1S46_18150 PF00425 chorismate binding enzyme M1S46_18155 PF13419 Haloacid dehalogenase-like hydrolase M1S46_18160 PF00498 FHA domain M1S46_18160 PF12401 Protein of unknown function (DUF2662) M1S46_18165 PF00263 Bacterial type II and III secretion system protein M1S46_18165 PF03958 Bacterial type II/III secretion system short domain M1S46_18180 PF00816 H-NS histone family M1S46_18205 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S46_18205 PF03900 Porphobilinogen deaminase, C-terminal domain M1S46_18210 PF04397 LytTr DNA-binding domain M1S46_18210 PF00072 Response regulator receiver domain M1S46_18215 PF06580 Histidine kinase M1S46_18215 PF07694 5TMR of 5TMR-LYT M1S46_18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_18220 PF00206 Lyase M1S46_18220 PF14698 Argininosuccinate lyase C-terminal M1S46_18225 PF04362 Bacterial Fe(2+) trafficking M1S46_18230 PF01895 PhoU domain M1S46_18235 PF02321 Outer membrane efflux protein M1S46_18240 PF00892 EamA-like transporter family M1S46_18255 PF13667 ThiC-associated domain M1S46_18255 PF01964 Radical SAM ThiC family M1S46_18260 PF00293 NUDIX domain M1S46_18265 PF00149 Calcineurin-like phosphoesterase M1S46_18270 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S46_18275 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S46_18280 PF01098 Cell cycle protein M1S46_18285 PF02875 Mur ligase family, glutamate ligase domain M1S46_18285 PF08245 Mur ligase middle domain M1S46_18295 PF02421 Ferrous iron transport protein B M1S46_18295 PF07670 Nucleoside recognition M1S46_18295 PF07664 Ferrous iron transport protein B C terminus M1S46_18305 PF02899 Phage integrase, N-terminal SAM-like domain M1S46_18305 PF00589 Phage integrase family M1S46_18310 PF10411 Disulfide bond isomerase protein N-terminus M1S46_18310 PF13098 Thioredoxin-like domain M1S46_18315 PF00742 Homoserine dehydrogenase M1S46_18315 PF01842 ACT domain M1S46_18315 PF03447 Homoserine dehydrogenase, NAD binding domain M1S46_18320 PF00291 Pyridoxal-phosphate dependent enzyme M1S46_18325 PF00768 D-alanyl-D-alanine carboxypeptidase M1S46_18330 PF00196 Bacterial regulatory proteins, luxR family M1S46_18330 PF00072 Response regulator receiver domain M1S46_18335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S46_18335 PF00512 His Kinase A (phospho-acceptor) domain M1S46_18340 PF02954 Bacterial regulatory protein, Fis family M1S46_18340 PF00072 Response regulator receiver domain M1S46_18340 PF00158 Sigma-54 interaction domain M1S46_18345 PF03572 Peptidase family S41 M1S46_18345 PF00595 PDZ domain M1S46_18350 PF01676 Metalloenzyme superfamily M1S46_18350 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S46_18355 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S46_18365 PF00883 Cytosol aminopeptidase family, catalytic domain M1S46_18365 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S46_18385 PF00677 Lumazine binding domain M1S46_18395 PF01872 RibD C-terminal domain M1S46_18395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S46_18400 PF03477 ATP cone domain M1S46_18405 PF00909 Ammonium Transporter Family M1S46_18410 PF00543 Nitrogen regulatory protein P-II M1S46_18430 PF01636 Phosphotransferase enzyme family M1S46_18435 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S46_18455 PF02909 Tetracyclin repressor-like, C-terminal domain M1S46_18455 PF00440 Bacterial regulatory proteins, tetR family M1S46_18460 PF07690 Major Facilitator Superfamily M1S46_18470 PF00916 Sulfate permease family M1S46_18470 PF01740 STAS domain M1S46_18475 PF00582 Universal stress protein family M1S46_18495 PF00665 Integrase core domain M1S46_18510 PF00392 Bacterial regulatory proteins, gntR family M1S46_18510 PF00155 Aminotransferase class I and II M1S46_18520 PF00701 Dihydrodipicolinate synthetase family M1S46_18535 PF03573 outer membrane porin, OprD family M1S46_18540 PF00719 Inorganic pyrophosphatase M1S46_18555 PF13193 AMP-binding enzyme C-terminal domain M1S46_18555 PF00501 AMP-binding enzyme M1S46_18560 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S46_18560 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S46_18565 PF07690 Major Facilitator Superfamily M1S46_18570 PF03458 UPF0126 domain M1S46_18575 PF02810 SEC-C motif M1S46_18580 PF03741 Integral membrane protein TerC family M1S46_18580 PF03471 Transporter associated domain M1S46_18585 PF03641 Possible lysine decarboxylase M1S46_18590 PF07690 Major Facilitator Superfamily M1S46_18600 PF11799 impB/mucB/samB family C-terminal domain M1S46_18600 PF00817 impB/mucB/samB family M1S46_18600 PF11798 IMS family HHH motif M1S46_18620 PF04055 Radical SAM superfamily M1S46_18620 PF08497 Radical SAM N-terminal M1S46_18620 PF11842 Domain of unknown function (DUF3362) M1S46_18640 PF03358 NADPH-dependent FMN reductase M1S46_18650 PF00291 Pyridoxal-phosphate dependent enzyme M1S46_18710 PF01327 Polypeptide deformylase M1S46_18720 PF02481 DNA recombination-mediator protein A M1S46_18720 PF17782 DprA winged helix domain M1S46_18725 PF01300 Telomere recombination M1S46_18730 PF00892 EamA-like transporter family M1S46_18735 PF00440 Bacterial regulatory proteins, tetR family M1S46_18740 PF07690 Major Facilitator Superfamily M1S46_18750 PF00255 Glutathione peroxidase M1S46_18760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S46_18765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S46_18765 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S46_18770 PF00231 ATP synthase M1S46_18775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S46_18775 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S46_18775 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S46_18780 PF00213 ATP synthase delta (OSCP) subunit M1S46_18785 PF00430 ATP synthase B/B' CF(0) M1S46_18790 PF00137 ATP synthase subunit C M1S46_18795 PF00119 ATP synthase A chain M1S46_18815 PF00005 ABC transporter M1S46_18820 PF00950 ABC 3 transport family M1S46_18825 PF01810 LysE type translocator M1S46_18830 PF04261 Dyp-type peroxidase family M1S46_18840 PF00390 Malic enzyme, N-terminal domain M1S46_18840 PF03949 Malic enzyme, NAD binding domain M1S46_18845 PF03485 Arginyl tRNA synthetase N terminal domain M1S46_18845 PF00750 tRNA synthetases class I (R) M1S46_18845 PF05746 DALR anticodon binding domain M1S46_18865 PF02678 Pirin M1S46_18865 PF05726 Pirin C-terminal cupin domain M1S46_18875 PF03551 Transcriptional regulator PadR-like family M1S46_18880 PF13427 Domain of unknown function (DUF4111) M1S46_18880 PF01909 Nucleotidyltransferase domain M1S46_18885 PF00117 Glutamine amidotransferase class-I M1S46_18885 PF00958 GMP synthase C terminal domain M1S46_18885 PF02540 NAD synthase M1S46_18890 PF04286 Protein of unknown function (DUF445) M1S46_18895 PF07681 DoxX M1S46_18900 PF09335 SNARE associated Golgi protein M1S46_18915 PF13614 AAA domain M1S46_18925 PF01722 BolA-like protein M1S46_18935 PF01648 4'-phosphopantetheinyl transferase superfamily M1S46_18940 PF12697 Alpha/beta hydrolase family M1S46_18960 PF00975 Thioesterase domain M1S46_18960 PF14765 Polyketide synthase dehydratase M1S46_18960 PF00550 Phosphopantetheine attachment site M1S46_18960 PF08242 Methyltransferase domain M1S46_18960 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S46_18960 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S46_18960 PF16197 Ketoacyl-synthetase C-terminal extension M1S46_18965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_18965 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_18965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_18970 PF00501 AMP-binding enzyme M1S46_18975 PF00196 Bacterial regulatory proteins, luxR family M1S46_18975 PF03472 Autoinducer binding domain M1S46_18985 PF00765 Autoinducer synthase M1S46_18990 PF07690 Major Facilitator Superfamily M1S46_18990 PF00083 Sugar (and other) transporter M1S46_18995 PF00378 Enoyl-CoA hydratase/isomerase M1S46_19000 PF00378 Enoyl-CoA hydratase/isomerase M1S46_19005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S46_19005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S46_19005 PF02770 Acyl-CoA dehydrogenase, middle domain M1S46_19010 PF13193 AMP-binding enzyme C-terminal domain M1S46_19010 PF00501 AMP-binding enzyme M1S46_19015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S46_19015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S46_19020 PF00171 Aldehyde dehydrogenase family M1S46_19030 PF00324 Amino acid permease M1S46_19035 PF00324 Amino acid permease M1S46_19040 PF01042 Endoribonuclease L-PSP M1S46_19045 PF00842 Alanine racemase, C-terminal domain M1S46_19045 PF01168 Alanine racemase, N-terminal domain M1S46_19050 PF01266 FAD dependent oxidoreductase M1S46_19055 PF01037 Lrp/AsnC ligand binding domain M1S46_19065 PF07715 TonB-dependent Receptor Plug Domain M1S46_19065 PF00593 TonB dependent receptor M1S46_19080 PF00849 RNA pseudouridylate synthase M1S46_19095 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S46_19095 PF00440 Bacterial regulatory proteins, tetR family M1S46_19105 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S46_19105 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S46_19140 PF00330 Aconitase family (aconitate hydratase) M1S46_19140 PF00694 Aconitase C-terminal domain M1S46_19145 PF00285 Citrate synthase, C-terminal domain M1S46_19155 PF00392 Bacterial regulatory proteins, gntR family M1S46_19155 PF07729 FCD domain M1S46_19165 PF00155 Aminotransferase class I and II M1S46_19170 PF09330 D-lactate dehydrogenase, membrane binding M1S46_19170 PF01565 FAD binding domain M1S46_19175 PF01070 FMN-dependent dehydrogenase M1S46_19180 PF00392 Bacterial regulatory proteins, gntR family M1S46_19180 PF07729 FCD domain M1S46_19185 PF02652 L-lactate permease M1S46_19190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S46_19190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S46_19190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S46_19190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S46_19195 PF16363 GDP-mannose 4,6 dehydratase M1S46_19200 PF00342 Phosphoglucose isomerase M1S46_19205 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S46_19205 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S46_19205 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S46_19210 PF00483 Nucleotidyl transferase M1S46_19215 PF02397 Bacterial sugar transferase M1S46_19220 PF00535 Glycosyl transferase family 2 M1S46_19250 PF08666 SAF domain M1S46_19250 PF03102 NeuB family M1S46_19265 PF02348 Cytidylyltransferase M1S46_19270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S46_19275 PF02719 Polysaccharide biosynthesis protein M1S46_19280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S46_19280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S46_19280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S46_19285 PF10531 SLBB domain M1S46_19285 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S46_19285 PF02563 Polysaccharide biosynthesis/export protein M1S46_19290 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S46_19295 PF02706 Chain length determinant protein M1S46_19295 PF13807 G-rich domain on putative tyrosine kinase M1S46_19295 PF13614 AAA domain M1S46_19300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S46_19300 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S46_19305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S46_19305 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S46_19310 PF03023 Lipid II flippase MurJ M1S46_19315 PF01510 N-acetylmuramoyl-L-alanine amidase M1S46_19320 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S46_19320 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S46_19330 PF05506 Domain of unknown function (DUF756) M1S46_19330 PF04185 Phosphoesterase family M1S46_19340 PF03725 3' exoribonuclease family, domain 2 M1S46_19340 PF01138 3' exoribonuclease family, domain 1 M1S46_19345 PF00487 Fatty acid desaturase M1S46_19350 PF00175 Oxidoreductase NAD-binding domain M1S46_19355 PF00440 Bacterial regulatory proteins, tetR family M1S46_19360 PF08360 QacR-like protein, C-terminal region M1S46_19360 PF00440 Bacterial regulatory proteins, tetR family M1S46_19365 PF01323 DSBA-like thioredoxin domain M1S46_19375 PF13419 Haloacid dehalogenase-like hydrolase M1S46_19380 PF00106 short chain dehydrogenase M1S46_19395 PF00583 Acetyltransferase (GNAT) family M1S46_19395 PF00696 Amino acid kinase family M1S46_19400 PF09084 NMT1/THI5 like M1S46_19405 PF09084 NMT1/THI5 like M1S46_19410 PF00296 Luciferase-like monooxygenase M1S46_19415 PF00528 Binding-protein-dependent transport system inner membrane component M1S46_19420 PF00005 ABC transporter M1S46_19425 PF08362 YcdC-like protein, C-terminal region M1S46_19425 PF00440 Bacterial regulatory proteins, tetR family M1S46_19430 PF01048 Phosphorylase superfamily M1S46_19440 PF01687 Riboflavin kinase M1S46_19440 PF06574 FAD synthetase M1S46_19445 PF06827 Zinc finger found in FPG and IleRS M1S46_19445 PF08264 Anticodon-binding domain of tRNA M1S46_19445 PF00133 tRNA synthetases class I (I, L, M and V) M1S46_19450 PF01252 Signal peptidase (SPase) II M1S46_19455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S46_19495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S46_19500 PF07859 alpha/beta hydrolase fold M1S46_19520 PF03466 LysR substrate binding domain M1S46_19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S46_19525 PF01025 GrpE M1S46_19530 PF00012 Hsp70 protein M1S46_19550 PF13406 Transglycosylase SLT domain M1S46_19555 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S46_19555 PF02222 ATP-grasp domain M1S46_19560 PF00731 AIR carboxylase M1S46_19570 PF08245 Mur ligase middle domain M1S46_19570 PF02875 Mur ligase family, glutamate ligase domain M1S46_19570 PF01225 Mur ligase family, catalytic domain M1S46_19580 PF01569 PAP2 superfamily M1S46_19585 PF03741 Integral membrane protein TerC family M1S46_19595 PF03738 Glutathionylspermidine synthase preATP-grasp M1S46_19600 PF00355 Rieske [2Fe-2S] domain M1S46_19605 PF01979 Amidohydrolase family M1S46_19610 PF00156 Phosphoribosyl transferase domain M1S46_19620 PF10411 Disulfide bond isomerase protein N-terminus M1S46_19620 PF13098 Thioredoxin-like domain M1S46_19625 PF01545 Cation efflux family M1S46_19625 PF16916 Dimerisation domain of Zinc Transporter M1S46_19630 PF02583 Metal-sensitive transcriptional repressor M1S46_19635 PF01926 50S ribosome-binding GTPase M1S46_19635 PF12631 MnmE helical domain M1S46_19635 PF10396 GTP-binding protein TrmE N-terminus M1S46_19640 PF02096 60Kd inner membrane protein M1S46_19640 PF14849 YidC periplasmic domain M1S46_19645 PF01809 Putative membrane protein insertion efficiency factor M1S46_19650 PF00825 Ribonuclease P M1S46_19655 PF00468 Ribosomal protein L34 M1S46_19660 PF13614 AAA domain M1S46_19665 PF02195 ParB-like nuclease domain M1S46_19665 PF17762 HTH domain found in ParB protein M1S46_19805 PF18272 single-stranded DNA binding TraI N-terminal subdomain M1S46_19805 PF07057 DNA helicase TraI M1S46_19805 PF18340 DNA relaxase TraI 2B/2B-like domain M1S46_19805 PF08751 TrwC relaxase M1S46_19830 PF13936 Helix-turn-helix domain M1S46_19830 PF00665 Integrase core domain M1S46_19840 PF02796 Helix-turn-helix domain of resolvase M1S46_19840 PF00239 Resolvase, N terminal domain M1S46_19855 PF01464 Transglycosylase SLT domain M1S46_19890 PF10411 Disulfide bond isomerase protein N-terminus M1S46_19890 PF13098 Thioredoxin-like domain M1S46_19925 PF06834 TraU protein M1S46_19935 PF06986 Type-1V conjugative transfer system mating pair stabilisation M1S46_19950 PF06122 Conjugative relaxosome accessory transposon protein M1S46_19970 PF11799 impB/mucB/samB family C-terminal domain M1S46_19970 PF00817 impB/mucB/samB family M1S46_19970 PF11798 IMS family HHH motif M1S46_19970 PF13438 Domain of unknown function (DUF4113) M1S46_20040 PF00565 Staphylococcal nuclease homologue M1S46_20045 PF00816 H-NS histone family